CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019822	Leptotrichia goodfellowii strain JCM16774	7 crisprs	cas3,WYL,cas6,cas8b2,cas7,cas5,cas4,cas1,cas2,DEDDh,DinG,csm4gr5,csm3gr7,cas10,PD-DExK,csa3	1	6	5	1

1. NZ_AP019822

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019822_1

• CRISPR_ID: NZ_AP019822_1
• CRISPR_location: 211942-212048
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019822_1

Consensus_repeat	Method
CTTTTTAGAAAAAAGCAGCAAAAA	CRISPRCasFinder

spacers of NZ_AP019822_1

>1.1|211966|59|NZ_AP019822|CRISPRCasFinder
TATTTAATTTCCTTTTTTCAAAAAAGGTAAACGAAAAAACAGATCAAAATTTTTTAACT

CRISPR arrays and Neighbor proteins around NZ_AP019822_1

CRISPR arrays

The CRISPR arrays of NZ_AP019822_1

>merge|NZ_AP019822|1|211942-212048|CRISPRCasFinder
CTTTTTAGAAAAAAGCAGCAAAAATATTTAATTTCCTTTTTTCAAAAAAGGTAAACGAAAAAACAGATCAAAATTTTTTAACTGCTTTTTAAAAAAAGCAGCAAAAA

>NZ_AP019822|1|1|211942-212048|CRISPRCasFinder
CTTTTTAGAAAAAAGCAGCAAAAA	TATTTAATTTCCTTTTTTCAAAAAAGGTAAACGAAAAAACAGATCAAAATTTTTTAACT
GCTTTTTAAAAAAAGCAGCAAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026736912.1|224594_225869_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_006806856.1|224047_224566_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_006807714.1|201860_203825_+|PASTA-domain-containing-protein	unknown	unknown	gnl|CDD|223839
NZ_AP019822.1|WP_026736905.1|209101_209587_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl|CDD|235777
NZ_AP019822.1|WP_006806853.1|219063_220041_+|hypothetical-protein	unknown	unknown	gnl|CDD|276809
NZ_AP019822.1|WP_026736911.1|218001_218781_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_081724218.1|220095_224025_+|DUF4280-domain-containing-protein	unknown	unknown	gnl|CDD|225720
NZ_AP019822.1|WP_026736910.1|216021_217359_+|signal-recognition-particle-protein	unknown	unknown	gnl|CDD|236780
NZ_AP019822.1|WP_026736901.1|206086_206599_+|peptide-deformylase	unknown	unknown	gnl|CDD|234668
NZ_AP019822.1|WP_026736907.1|210937_211390_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240044
NZ_AP019822.1|WP_026736906.1|209631_210951_+|HlyC/CorC-family-transporter	unknown	unknown	gnl|CDD|224173
NZ_AP019822.1|WP_026736900.1|203854_206059_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|235514
NZ_AP019822.1|WP_026736908.1|211399_211930_+|adenine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|235028
NZ_AP019822.1|WP_026736904.1|208222_209074_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl|CDD|223268
NZ_AP019822.1|WP_036055970.1|212308_214474_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl|CDD|223394
NZ_AP019822.1|WP_006806354.1|215692_216022_+|hypothetical-protein	unknown	unknown	gnl|CDD|234647
NZ_AP019822.1|WP_026736913.1|225865_226597_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_036055972.1|214517_215678_+|tRNA-guanosine(34)-transglycosylase-Tgt	unknown	unknown	gnl|CDD|234642
NZ_AP019822.1|WP_026736902.1|206603_207536_+|methionyl-tRNA-formyltransferase	unknown	unknown	gnl|CDD|234567
NZ_AP019822.1|WP_026736903.1|207564_208221_+|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl|CDD|235486

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_006807714.1|201860_203825_+|PASTA-domain-containing-protein	gnl|CDD|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	7.26377e-124
NZ_AP019822.1|WP_026736905.1|209101_209587_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl|CDD|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	1.72336e-43
NZ_AP019822.1|WP_006806853.1|219063_220041_+|hypothetical-protein	gnl|CDD|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.39007e-05
NZ_AP019822.1|WP_081724218.1|220095_224025_+|DUF4280-domain-containing-protein	gnl|CDD|225720	COG3179, COG3179, Predicted chitinase [General function prediction only].	1.91539e-22
NZ_AP019822.1|WP_026736910.1|216021_217359_+|signal-recognition-particle-protein	gnl|CDD|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_AP019822.1|WP_026736901.1|206086_206599_+|peptide-deformylase	gnl|CDD|234668	PRK00150, def, peptide deformylase; Reviewed.	3.93999e-71
NZ_AP019822.1|WP_026736907.1|210937_211390_+|NUDIX-domain-containing-protein	gnl|CDD|240044	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.71758e-20
NZ_AP019822.1|WP_026736906.1|209631_210951_+|HlyC/CorC-family-transporter	gnl|CDD|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	6.79501e-110
NZ_AP019822.1|WP_026736900.1|203854_206059_+|primosomal-protein-N'	gnl|CDD|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0
NZ_AP019822.1|WP_026736908.1|211399_211930_+|adenine-phosphoribosyltransferase	gnl|CDD|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	4.13872e-87
NZ_AP019822.1|WP_026736904.1|208222_209074_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl|CDD|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	1.66019e-132
NZ_AP019822.1|WP_036055970.1|212308_214474_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl|CDD|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_AP019822.1|WP_006806354.1|215692_216022_+|hypothetical-protein	gnl|CDD|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	3.74645e-23
NZ_AP019822.1|WP_036055972.1|214517_215678_+|tRNA-guanosine(34)-transglycosylase-Tgt	gnl|CDD|234642	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional.	0
NZ_AP019822.1|WP_026736902.1|206603_207536_+|methionyl-tRNA-formyltransferase	gnl|CDD|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	9.1468e-144
NZ_AP019822.1|WP_026736903.1|207564_208221_+|redox-sensing-transcriptional-repressor-Rex	gnl|CDD|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	6.11701e-73

Protein sequences

>NZ_AP019822.1|WP_026736908.1|211399_211930_+|adenine-phosphoribosyltransferase
MKTEEKKIVEGLIRTIPDFPEKGIVFRDITTALKDKKGLNIVIKDFTERYKDKGIDYVLGADARGFIFGAAIAYNIGVGFVPARKVGKLPAETVKIEYELEYGKNSIEIHKDSFKKGDKVLIVDDLLATGGTAAAMVKLVEMLGASIYELAFMIELEDLKGRDVLKGHEVYSQLQY
>NZ_AP019822.1|WP_026736907.1|210937_211390_+|NUDIX-domain-containing-protein
MEKIRPRVRVAGILIENERILLIEHSKNDKKYWLVPGGGVDWGESTAESLIREYKEETNLDIEVESFLFLSETIAPNKEKHVINLYFKVKRKDTSKEDLKLGNEEMLTDLKFFEKEKIKNIKLYPNIKEQIIKLLNKEKIVPYLGLLWDK
>NZ_AP019822.1|WP_026736906.1|209631_210951_+|HlyC/CorC-family-transporter
MEEQRIWVKIILLIILLFLSAFFSATEAALISLKRIHIGDIKEKNSKEETLLKLWLKNPNELLTTLLLGKTAVYVLSVSTAVMLAESYYNSFFGHMNRSFYMFSAFVIIVIIMLIITEITPRVFAKNSAAKISRTLIVPLNTLRIILRPVILIFLEISKLIIKLFGIKVKEQMFEITEEDIKTFVKEGTEVGVIEEGEEEMIHSIFEFSDTTVKEILTPRTTVFALDMEKTIGEVWDEVVEQGFSRIPVYNETIDKIVGIVHMKDMIKYNKEEHSDMKIKELMKEPYFVPTTKTLVELLEEFKKKQSHMAIIIDEYGGTLGIVTIEDLLEEIVGEIRDEFDQEEESIQQIKETIFDIRGDTVIEELNEELDINMPVSEEYDTVSGYVQDELGKVAEEGDQVKGDGFILKVMEVDNKRIEKLRIIITEKNNEREADDGKD
>NZ_AP019822.1|WP_026736905.1|209101_209587_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MKEKIKFIRELAQSMNENKIEEVQYEENNFEIQLRKKGKEKRTVIYGGAPVNVQPEASNQVSSEAVIDNISTVAEKVETTEEISGTKIESPMVGTFYIAPSPTSAPFIKEGDNVTEGQTLCIVEAMKLMNEVKSSVSGKVKKIMAKDGDAIKKGQVLVIIE
>NZ_AP019822.1|WP_026736904.1|208222_209074_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MIKIDGKDISQKILKYIEKEHKLLRDKYERTAGLAVIMAGNNPASEVYVKNKIKACESVKFYSEIVRLDENVTEADFIKEIERFNKNDKIDGILIQLPLPEHINELKVINAVSPEKDVDGFHVVNIGKMMTGDKSGFLPCTPYGIIQLLEEYDIDPAGKDVVIVGRSNIVGKPLALMLIEKSATVQVCNTKTKNIREKLKNADIVIAAAGVPNLISAEDIKEGAVVIDVGINRVNGKLCGDVNYEEVSEKAGYITPVPGGVGPMTIASLIKNTFKSYINKVEK
>NZ_AP019822.1|WP_026736903.1|207564_208221_+|redox-sensing-transcriptional-repressor-Rex
MKLKKNDISDRVVQRLTNYLSILKEVRKYEEGINSIELSKIMDTTSAQVRKDLSTFGEFGVRGKGYDIEKLIEIIEEILGINKVNDVIIVGHGKMGEMITSNSKVLGKGFKIVGVFDKDKKKIGEKIPDLKMEIKNVEEVEDFIKNSSEAVETAILAVVKDQAQIAAEKLIRSGIKAILNMTTYKLELPKNIVVVDIDISAKLQELNFWRLNINDREE
>NZ_AP019822.1|WP_026736902.1|206603_207536_+|methionyl-tRNA-formyltransferase
MKTIFMGTPEFAIPSLETVYKNTDLKLIFTKEDKRNARGNKIIFSPVKQFGLDNNIEIIQPKKLKEAEITEKIREINPDLIVVVAYGKIIPKEIIDIPKYGIINVHSSLLPKYRGASPIHSAILNGDKETGVSIMYIEEELDAGDVILKEYCEITEDDTLGTLHDKLKELGATGLGKTLKLIESENVKTEKQDDTKATFVKPISKEQAKIDWTDTKENVYNKIRGLNPFPGAYTFNEKNENIKVYKGEKTDKLYDGEFGEIVEIINKKGPVVKVRNGGIILTEVKFEGKKIQKGTDVINGRKLLQGEKLI
>NZ_AP019822.1|WP_026736901.1|206086_206599_+|peptide-deformylase
MNIVLYEHPTLRTKSTEVDIVDDELRKILDEMVETMRKANGVGLAANQVGIPKRFFVLEVENKVRKIVNPEIIESSDEIIEYEEGCLSIPGIYKKVNRPSEIKVKYLNEKGEEVIEELKEMWARAFQHELDHLDGVLFIDRISVLNKRLISKKLELMKKEFAKGKKYREE
>NZ_AP019822.1|WP_026736900.1|203854_206059_+|primosomal-protein-N'
MYYYQMYVENNKNIYTYKSQDKYEIGEWCIVNFANRNKMALVLSEINETELTIDTAKIKFISDKAPVLSVPSVIMELVKWIKDYYLSDYNSVIKAAYPGALKLNYSKKAVYVKDLEIKEKKEKLFEKEESGKSESIEKFNEYMKKKKEVTFQTLQKNFSEKIINKAIREKAVTIEKKIITKSKIKENTELKSEILKDSVVLNDEQQKAVNRIENGNNKFYLIKGVTGSGKTEIYVNLIKNAMKENCGSIFLVPEISLTPQMIERLERQFSGSVAVLHSKLTDVEKRAEWSFIRRGEKKIVIGARSAIFAPVENLKYIIIDEEHENTYKQDTNPRYHVKNAAIKRALIEENVKVIFGSATPSFESYYQAKKGDLELIELKERFNNAKIPEYKVVDLNETPNNFSDELLKEISNTLAKKEQVLLVLNRKAFSNLLKCKECGNIPTCPNCSISLSYYKYDNKLKCSYCGYEERFDKKCKSCGSDKMIQIGSGTEKIEEELKEIFYDGKIVRIDSESVKTKKDYENLYNDFKNQKYNIMLGTQIIAKGFHFPNVTLVGIVNSDIILNFPDFRAAEKTFQLLVQSAGRAGREEKEGQVIIQTFNKENEVIKKTVENDYEGYFEKEMEIRKLFNYPPYGRLIIIVLSSDEENGLEEKVKIFYNKIMSSVKRKIQPEKNEFISEPFKAPIYKINTRYRYQIFIKFNRNNITKIKNIIRATLNDYNEKNMRISVDVDPVSML
>NZ_AP019822.1|WP_006807714.1|201860_203825_+|PASTA-domain-containing-protein
MKERNSFRFRLMILVLFISAGFLWVIINLFYIQIVKGSEWQKTGEMQYKSEFTVKSKRGRIITNDGEVLAYDGETYDLILDPTLIDPENIDKLMELLKKNIISFDVNKVKNDISDKMRQNKKYLKLDYILGYNEKRAILDELSKDKSLKSGVFFETNYIRHYIRNKAFQETIGYMNTENKGVYGIEKTYNDQLTGVDGLIEGFRIPRKFTTITSLKDTKEVVLAKNGDNVILTVDSVLQYALDEELRKTFEEYSAVSTMGILMEVETGKILAMSSYPKAENNAEVKNRPITDLFEPGSIFKPITVSTGLQLGVINQNSMIESSGHIRVADRVIKDHDSSTTGSLNLENLIAKSGNVGMVKIAQMMKTKDFYSYLEKVGLGKKTGIDTYSETTQKLLPLKDMTEVKKSNIAFGQGIAMTQMQIMMALNTVVNHGKLMKPYIVDHIEDDDGNIISQNSPVVLENVFSEEVSRLNRYYMEAVVTKGTGRGAQIEGYNIGGKTGTAQKSGTRGYETGKYFSSFFAFFPVENPKYAILITVNEPHGAYYGAAVALPSVKQVLEKLIKYKGINPQGIITAQKQQIAINSYTKKDLKKISEDFGKNLMPDLKGISMRELLSVYPQKKFPKYNIAGSGRVTDQWPAAGAKLDKNTEIKIVLE
>NZ_AP019822.1|WP_036055970.1|212308_214474_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MEEKELLGKLIDRIKKNNLEVDINKITEAFTLAAESHGGQKRRSGEDYILHPVEVAEILVDMRMDTDTVVAGILHDVVEDTLITLPDIEYSFGKDVSKLVDGVTKLRNLPKTDSKKIENIRKMVVAMSEDIRVVIIKLADRLHNMRTLKYMSPEKQQIKSKETIEIYAPIAHRIGMARIKWELEDISFRFLYPEDYREISDLVNFKRKERENYTLEIIRKIEEELKKHNVKSEVTGRPKHLYSIYRKMYEKEKKFADLNDLIAIRIIVDKEEECYNVLGIIHNLFIPVSGRFKDYIAVPKSNGYQSIHTTVKGPNDQNVEIQIRTFDMHRIAEDGVAAHWKYKEKKSKAKNEEYYAAVKKMIETNSENPEKFAQTITGNVLNQTIFVFTPKGDVMELPNGSTALDFAFQVHTQIGYRTIGAKVNDRIVQLDQVLENADKVEVLTSRNTKGPGKDWINMVNNHSSKVKIRKWFKDKEFEEKTKEGEQLLEKEFEKLGIKLKDLEEDERVFLYMKKFNITTMDLLFYKFAMGDLSLDGFLKKFEVKEEKNLKQVLEEETEKGNRRKEKSQGGVRISGTENTMYRFAKCCNPLPGDEIKGYVTRGRGIAIHRADCDNFHSLMEHEPDREIEVSWDEETANSSNAKYQFNFTVKVLERNGVLLDIIRILNEYKMELINVNTNYVRENMNRYVLLHFGIMIKNREDFERLANNLKSMKDVVDIIRK
>NZ_AP019822.1|WP_036055972.1|214517_215678_+|tRNA-guanosine(34)-transglycosylase-Tgt
MSKFDNPVKYRLETTDGNARAGVIETPHGLIKTPVFMPVGTQATVKAMTREELEEINSQIILGNTYHLYLRPGDELINDFGGLHKFMNWDRPILTDSGGFQVFSLGDLRKIKEEGVHFSSHIDGSKHFLSPEKSISIQNNLGSDIMMVLDECPPGLSTREYMIPSVERTTRWAKRCIEANRNKDRQGLFAIVQGGIYEDLRDKSLNELTEMDEHFAGYAIGGLAVGEPREDMYRILKYITPKAPDNKPRYLMGVGEPLDMLEAVEHGIDMMDCVQPTRIGRHGTVFTKYGRLVIKNAAYSRDNRPLDECDCYVCKNYTRAYIRHLFKADEILGQRLATYHNLYFLLKLMEDARNAILEKRFKEFKEEFIKNYTMGKDSDWIKPFSI
>NZ_AP019822.1|WP_006806354.1|215692_216022_+|hypothetical-protein
MDKLDDFLRYSTLFLYYGELFSQRQKQYLELYLEENESLSEIAEKYEITRQAVFDNIKRGFKQLDEYEKKLGMFEREKELKKKLENLKNDFTKENLEKIIEDFDYNEVL
>NZ_AP019822.1|WP_026736910.1|216021_217359_+|signal-recognition-particle-protein
MFNSLGDRFKDIFKKVSGQGKLTEANIKEALREVRLALLEADVNYGVAKNFVAKIRDKALGEEVIKGVNPTQQFIKIVHDELVEVLGGTNVLIAKSPKAPTIVMLSGLQGAGKTTFAGKLSKHLKSKGESPFLIGADVYRPAAKKQLKVLAEQVKVPSFTIDESTDVIEICKKGIEEAKNVHATYVIIDTAGRLHVDEQLMEEIQNIKSTFNPHEILLVVDGMTGQDAVNVAKTFNDRLDITGVVLTKLDGDTRGGAALSVKEVAGKPIKFISEGEKLDDIAPFHPDRLASRILGMGDVVSLVEKAQEVIDENEAKKMEEKFRKNQFDFEDFLKQFKMIRKMGSLAGIMKMIPGVDTGAIDMAMAEKEMKRVEGIIFSMTVQERRDPKILNGSRKIRIAKGSGVEVNDVNRLIKQFEQMKQMMKMFNSGAIPGLGGMKPKSKRKR
>NZ_AP019822.1|WP_026736911.1|218001_218781_+|hypothetical-protein
MFENKYPVFRKGNVVDKESLELLRDNPSEILNLMYFNKKDGIIKGFDLITDEENKEVIVTKGIVKYQNEIYWMYEDYKFKMPETENRYVLKLRLISNIEERKYYKRKGEFVLETLDDSGTDGIEITRFITREGAELRNDYMNFQDLRRDFNLLEIINSKYSSNHKFGTLHPKITKLWGSEAAKKENLDIFDINFYVNCLQGPVEREVIISYINAKLNLHKSDYTNEELYMNLLKILDELGKERKNVEKRRVIPQKITIE
>NZ_AP019822.1|WP_006806853.1|219063_220041_+|hypothetical-protein
MKKRRFYEVLIIFIVLAFNSCGENTDKEKTELNSDNKTNKISSRNNDQHNEIDNKLKNGITKENITALNDYAYELEKRGELKKSKYLLEKILEKFPDRDVANLNYADVLWKLKEKEKSEKYYNNYIKLLIKGNKIKKLLSNNKEIYFSNTVKLKKVISGYVNSDKNEDYLIEYSNITDDRFDIANGGSGEDIEFTDREYKKGKNTKCLKFLVSVGNDYKIFDNCKVIIPLTLRGYGGRAGSQVYYEIKNNKYIIFDRNMDSNQSFSDYYIEIIYDKNNLIVSQIKSKSYEKVTDTNGNNNIVEREENIHRVNKKIEIFDMSKEGF
>NZ_AP019822.1|WP_081724218.1|220095_224025_+|DUF4280-domain-containing-protein
MFPGGKEKLFVSTIDEINKCFKKFNLDSCLAYSHFFAHFRQETDYVSFEESLNYSQEQLISTFSKFRNNRELAVKYGRSHGKKANQEMIGNIAYGDRKELGNRGINSGDGYKYRGRGLIQVTGRSNYMQATQIYNKVFEENIDFVSNPDLILQPKYAVRASFADLLNKKCETYVNIIEESKNGIEKYRKAFDLIMDKINKHTKSREKRWKYFKENFMTIFQCSVKDKVVLKNDSNDDNKNINKQSKTLEKSNVKGEAVEDKEGVYIFNGQKFQEVWDNEEYKKDRAENKKAPDIVFVNSNEVVLKRLQAKFQDESMYNKDYVKYIETTTAKKVLDENKEDINVILKIYDEATKNNENIGNVIRQHGFDLLRGRDGINEVLKIQDIIYYIFSYPIPNKSKIESLEYVLSQYSAKYVLFPDRKPLRENSENKELSLEKIKNIVNEVNTGNENVSERKVEKNNLPEKYNKYMEGIKDIDEIVIRVTKKPSSEFSKMKCENLIRELGESDEHRKSYLTDENGVRHFPLARRLIDNIIIEFLKIQTGFKEEKEIKYFDNHKYKDSNIVRNYLLWYVEKQNGIDLPSKNENGLYNRLEKLGKEMRVTTILNDWINSKSAIKVRNIRKISNLIDEVYSEYRDNNDFEKDKSIIHNLFKDSKELRDYAANIDSMDLYSFYRKFYDLKNIVKPNQEMFVNDNCMLKCTLGQDISRLIIAEDSVTLKGGKQANINDKKIMPFKMCKAIGICKPELLAMWEKNTDVKVRNHPALLDISTIQCKYGGTVSIDDAGQKEMGTAVTENKKTEEAQRDADCEYKLLIDICRDINNNFMQTELKKSSQKYAKWRKYKQETEKRAVEYLKNDVKEVLGMGKADEKKKKEYEKFVKDNKKKMEIAKTEASETREKELKNKIMSTFLEANKRVKQLSGPKLDTKGVIRKSGISLCDYERKNFYSAKILPAIVYGYLMKAGNLNMDSQERQTIENELNKDAVGIGTVNIDLTGYGIDSKFKKSKDSQKMKIPSSEIMTWVGIGESLYATVKNIPTEWDIQNKIREQGKSVGRCPFNQMEWNQNHKENKPLKDVPPLPETVTEKDKSDKISSNKETGKIVPDKKNETGKSSSKDSAESFCKGDNCPHVGVEKKAPWIKIAQEQCEKYKGKKEGNEPLYSQIKNVYFVIAKHEKKDPTKEAWCAAFISYCINKAGFKNSSYPSVAGYDWGVAPRKGLPRRGWFEGEKTKPFVGAIGVFKWHNGYSHVAILIGKTPKGAHVFLGGNQNNEINVTAYSEKRIDYYMKPKSYTISSEEWNLPIITKYKNSGSIG
>NZ_AP019822.1|WP_006806856.1|224047_224566_+|hypothetical-protein
MKKYIIIFLILSTLSISEIKYTGNKYEKIKSPKYTTYDTELKSLRRVLLVIANARVNKRYVLEKNDKDIFKGNPYYNNDEYLKQTSKLLLSLTNELKQLNYRHEIFKKANIRGYEYICSLEITEKPTRIGYIEGEIFGTVTCSSEFDDMSRFDEIYLKKVGNSYYIMDWFIS
>NZ_AP019822.1|WP_026736912.1|224594_225869_+|hypothetical-protein
MQGEREREELEKKLLGNSSRELFFELKNETDKRFSEIKEKFFEVQNNNYEELFIETLLVDEKEAYKFGGAFYPIVSENQNISDIFNENIYFENMYLDVPYYQLKDIEEETFNAWIHTDDETYEIKVVLEKDIRYGEKIKRLYEAFELNGQNWNTVNMSHIKRMYRIKVSDYDFEMTDKIYEGVKNKKYKIDYDFEYYDDNVIRGKKLLWNVEEKQIKSTIFIRPTKVDISFEYILKFDENEKLLIENNDKNDILCCYTENKNELSIISRRDDNSIWKVFSIKSVELCRKIMEMNFNKENLDYIHFTNYREISFVDKIRKHYNNENGIRSKAYLEKKFFDYEFIKNNFELKDVVFNKEKEKNIDVYNCNEFVETDFDLFQKKGKIVLNLFVKCLNRNKYTEDMLSFIVSEIQWRMPEYDCRGYLI
>NZ_AP019822.1|WP_026736913.1|225865_226597_+|hypothetical-protein
MSKRRREGYEYIWCPKVDISNVIFLIKENASPYLEINSDFINEDFQGENNIIEVNPYIRFNHIFSDFLYTFKNIEEKKGYSDLINKKFKNNLEHNALAYLRELDFVTGTTVADIYCEYILKDIEKGKFGRNILKYFRRMSEEDRKIAVLLIYNNISTKIENRKSFELGIKYFFPDSIIYMDKFEDNKIIVYINYKKDKINTAKIRVLESLFLPFGTTLKCYWGHHFGVIGVNDTMKIGEVSVF

Crispr_ID: NZ_AP019822_2

• CRISPR_ID: NZ_AP019822_2
• CRISPR_location: 931334-931497
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

Consensus repeat of NZ_AP019822_2

Consensus_repeat	Method
ATTAACAATATAAAATACGCGATTAGTGACT	CRISPRCasFinder
ATTAACAATATAAAATACGCGATTAGTGACTT	PILER-CR

spacers of NZ_AP019822_2

>2.1|931365|35|NZ_AP019822|CRISPRCasFinder
TTTGCTATTTGATTTAATTTTTTCTCATCTATTAT
>2.2|931431|35|NZ_AP019822|CRISPRCasFinder
TAGCGGAATATTCAGTGGAATCAATGAAATATTCA
>2.3|931374|34|NZ_AP019822|PILER-CR
TTGCTATTTGATTTAATTTTTTCTCATCTATTAT
>2.4|931440|34|NZ_AP019822|PILER-CR
AGCGGAATATTCAGTGGAATCAATGAAATATTCA

CRISPR arrays and Neighbor proteins around NZ_AP019822_2

CRISPR arrays

The CRISPR arrays of NZ_AP019822_2

>merge|NZ_AP019822|2|931334-931497|CRISPRCasFinder,PILER-CR
GAATTAGTTATAAAATACGCGATTAATAACTTTTGCTATTTGATTTAATTTTTTCTCATCTATTATATTAACAATATAAAATACGCGATTAGTGACTTAGCGGAATATTCAGTGGAATCAATGAAATATTCAATTAACAATATAAAATACGCGATTAGTGACTC

>NZ_AP019822|2|2|931334-931496|CRISPRCasFinder
GAATTAGTTATAAAATACGCGATTAATAACT	TTTGCTATTTGATTTAATTTTTTCTCATCTATTAT
ATTAACAATATAAAATACGCGATTAGTGACT	TAGCGGAATATTCAGTGGAATCAATGAAATATTCA
ATTAACAATATAAAATACGCGATTAGTGACT

>NZ_AP019822|2|1|931342-931497|PILER-CR
TATAAAATACGCGATTAATAACTTTTGCTATT	TGATTTAATTTTTTCTCATCTATTATATTAACAA
TATAAAATACGCGATTAGTGACTTAGCGGAAT	ATTCAGTGGAATCAATGAAATATTCAATTAACAA
TATAAAATACGCGATTAGTGACTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein	unknown	unknown	gnl|CDD|379488
NZ_AP019822.1|WP_026737443.1|928477_928903_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026737439.1|923408_923684_+|DUF2316-family-protein	unknown	unknown	gnl|CDD|370809
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl|CDD|273860
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380548
NZ_AP019822.1|WP_026737441.1|927141_927912_+|histidinol-phosphatase	unknown	unknown	gnl|CDD|213994
NZ_AP019822.1|WP_006806663.1|925632_926979_+|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl|CDD|224372
NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223725
NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380548
NZ_AP019822.1|WP_026737444.1|928912_929602_+|M48-family-metallopeptidase	unknown	unknown	gnl|CDD|307807
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl|CDD|187770
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl|CDD|273848
NZ_AP019822.1|WP_026737442.1|927947_928442_+|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239516
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_AP019822.1|WP_026737440.1|923782_925408_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|237894
NZ_AP019822.1|WP_026737438.1|922025_923393_+|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240548
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	cas8b2	pfam09706_cas8b2_CAS-I-B	gnl|CDD|187884
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|187856

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	2.6e-70	231.9	1.3
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	1.6e-64	212.7	5.7
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	5.6e-28	92.9	4.8
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	3.7e-129	425.2	14.7
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	2.1e-51	169.0	10.8
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	cas8b2	pfam09706_cas8b2_CAS-I-B	4e-12	41.2	0.1
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	1e-22	75.9	3.8
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	1.5e-24	80.9	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein	gnl|CDD|379488	pfam14133, DUF4300, Domain of unknown function (DUF4300). This family of lipoproteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 281 and 303 amino acids in length. There are two conserved sequence motifs: NCR and PYQ.	2.90655e-117
NZ_AP019822.1|WP_006806663.1|925632_926979_+|PTS-sugar-transporter-subunit-IIC	gnl|CDD|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	6.83841e-141
NZ_AP019822.1|WP_026737439.1|923408_923684_+|DUF2316-family-protein	gnl|CDD|370809	pfam10078, DUF2316, Uncharacterized protein conserved in bacteria (DUF2316). Members of this family of hypothetical bacterial proteins have no known function.	3.16528e-22
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	6.6577e-20
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.66619e-160
NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein	gnl|CDD|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	3.50823e-102
NZ_AP019822.1|WP_026737441.1|927141_927912_+|histidinol-phosphatase	gnl|CDD|213994	cd12110, PHP_HisPPase_Hisj_like, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase of Hisj like. Bacillus subtilis YtvP HisJ has strong histidinol phosphate phosphatase (HisPPase) activity. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	1.86302e-71
NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase	gnl|CDD|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	2.27086e-61
NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein	gnl|CDD|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	4.75635e-96
NZ_AP019822.1|WP_026737444.1|928912_929602_+|M48-family-metallopeptidase	gnl|CDD|307807	pfam01863, DUF45, Protein of unknown function DUF45. This protein has no known function. Members are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C-terminus being the most conserved region, containing three conserved histidines. This motif is similar to that found in Zinc proteases, suggesting that this family may also be proteases.	9.27339e-63
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	3.35705e-58
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.27704e-15
NZ_AP019822.1|WP_026737442.1|927947_928442_+|NUDIX-hydrolase	gnl|CDD|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	1.87431e-37
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	8.53955e-58
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.1032e-56
NZ_AP019822.1|WP_026737440.1|923782_925408_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_AP019822.1|WP_026737438.1|922025_923393_+|MATE-family-efflux-transporter	gnl|CDD|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	7.89719e-133
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	gnl|CDD|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	2.04143e-11
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.95267e-25

Protein sequences

>NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase
MVFSINSESYSKKMKMDVKIKTNKGEINLRLFPEKSPVTVASFVNLIKHGYYNGLKFHRVIEDFMAQGGDPTGTGMGGPGYRFEDEVKNGLDFSTPGKLAMANAGPGTNGSQFFITTVPTEWLTGKHTIFGEVASDKDLEVVKSLSNGDVMETVTVSGSGIDEFLSKYKDRISEWNKALGY
>NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein
MKKRIVISLICGILLVSCSQKIVNNDSDISISQKSNEEKHLKEITYSNLVDKASQEEVRTALKNAGVSEKSIKSFFEGVNYFNNSVENVSLVKNGFKIMEKPSPVYDEVTIQEKWNKKNPKFIGQNCRITAFELMKDFVSVGNPEIKNTEQLFMDQDSLKNFPVKIFTDKEKQQFESLFSSIETENTKDFATHIRKVKEDWEKKNIKFSNKNKISMISVFFHSEITPKESFLFIGHVGVLVPSSDGRFLFIEKLAFQEPYQALKFDNVLQLNDYLLNKYDVEYGQPNARPFIMENGDPLLMYHP
>NZ_AP019822.1|WP_026737444.1|928912_929602_+|M48-family-metallopeptidase
MRTEKILGYDIHRKKVKNINLRINQNMEVYISAPLNLHSSYIENFIRSKEDWIKKVLNRIEDVKSKQMEYEYKTGEVHKLIGREYSLIVKQGNTDRVNLSKDTGEIILVTKHENIENKKKIMDKWYYDCAKKIFPDVMEKWLKILDETIEHLSIKPMKTRWGSCNYNKRYINLNTELIKRTPFEIEYVVLHELAHLKYPNHGKGFYNYVENYMPNYKEAEKLLNAKHYY
>NZ_AP019822.1|WP_026737443.1|928477_928903_+|hypothetical-protein
MNIGLFIILYLFIYFLIRKIMKNIKLSFEKLEELGGEFIYTFLNRVFKKEIYFKLEEVKNIFFTRMVIKNDMFGNLMLYIILEDDYTVKLEKKENIIIFFASCKRNNPELYERFLRNTPMGINISAIMDKEIENYENKNRN
>NZ_AP019822.1|WP_026737442.1|927947_928442_+|NUDIX-hydrolase
MDGFRFLKGAKMTHPTTGITLEYLDKSNAVCFVLFNETKEKVILVKQFRPGPKDYTLEVVAGLIDAGENPETAAFRELREETGYTEDDITDFRKLEKGLFVSPGYTTENLYFFSARLKSDSIKPKELDLDEGEELEVEWVPVKDIVEKSNDMKTLFGVTYFLGK
>NZ_AP019822.1|WP_026737441.1|927141_927912_+|histidinol-phosphatase
MKTNFHTHNYRCGHAVGNVEDYVKVAVKEGYSELGISDHAPVPAYYNDRMKKEELQGYLEEIEEAQKKYKDKIKIYKSLEIEYFPEWQEYYDELKKKLDYIVLGLHAFRKEGETEIHSAWSIKEEEHVLDYGKYMVKAIESGNFDYIAHPDLYMIDYRNWTDGCIKAAHMICEAAEKYDVPLEVNANGIRKTLVRHPDWDRYMYPYKEFWEIAAQYNIRTIIGSDTHNYEEMEDLPMELARQFAKDLGLNVIETIF
>NZ_AP019822.1|WP_006806663.1|925632_926979_+|PTS-sugar-transporter-subunit-IIC
MKKFTDWMEQKFVPKAAKIASQRFLVAIKDSFIAIMPITMVGSIAVLLNVFFRDLPNSWGLEGFVKLMTPIININGIVWFASIAILSLAFVISLGYNVSRSYDVNPVAGALVAFASFIAFLPQEAKFDAEINGVTQAVSSWGFINLDYLGAKGLFPAMIIGLVSAIIYSKLMKSKLTIKLPDSVPPAVSKAFASIIPGVVAVYICAILSHLVVAATGSPLNDLIQKYIQAPLLGLSQGMFSVVLLAFLVQLFWFFGLHGHNVLAPIMDGIYQPALLANVEHMAKGGAVKDLPYIWTRGSFDAYLQMGGSGITIALIFAIYLFSKRKEYKTVAKLSTPMAIFNINEPVIFGIPIVLNPIYIIPFLLAPTVCAIIAYTATAIGLIPPVYVVVPWVLPPGIYAFFATGGSVKAALVSLFNVFVAFVIWAPFVIMANKMAEDKKNQENAEEK
>NZ_AP019822.1|WP_026737440.1|923782_925408_-|ATP-binding-cassette-domain-containing-protein
MISTSNLSVQFGGRKLFDEVDIKFTPGNCYGIIGPNGAGKSTFLKILTGEADSTSGEVIIDKNKRLSFLKQDHFAHEEEEVLNVVMMGHAKLYDIMMKKNELYSKSEFTEEDGILASELEGEFAELDGWEAETNAEKYLIGLGIPAELHHKLMKELTEPEKVKVLLAQAIFGNPDILLLDEPTNGLDLKAVKWLEDFLMDLENTTVLVVSHDRHFLNKVCTHIADIDYGKIKMFVGNYDFWYESNKLMQELIRNQNKKLEQKKKELQDFIARFSANASKSKQATSRKKQLEKLQFEDMQISNRKYPYIEFKPDREAGNNMLRVENLTKTVDGEKVLNNISFTVNTGDKVVILSDNDIAKTTLFQILSGEMEPDSGSFEWGVTTSQSYFPKDNSEYFENVDLSLIDWLRQFSTDQHEEYVRGFLGRMLFSGEEARKMAKVLSGGEKVRCMLSRMMLSGANVLLLDNPTDHLDLEAITSLNKSLMNFPGTVLFTTHDHEFIQTVANKIIEFTPNGILEKEMEYDDYINDENVQKKLNELYERN
>NZ_AP019822.1|WP_026737439.1|923408_923684_+|DUF2316-family-protein
MSLNVKQKKATAEELNENYKRLGYSEEKILSDLKFSEEELHNTLNVTENTNGYNVWKLRDYLVEKLKKERKEVYPFSILKMNIYFPYKKTW
>NZ_AP019822.1|WP_026737438.1|922025_923393_+|MATE-family-efflux-transporter
MENTVKEQNPLGYKPVSKLLASLAIPAVVANLVNALYNIVDQIFIGQGVGYLGNAATNIAFPIVTICLAIGLMIGVGSAANFNLELGRKNPDKAKHVAGTAASLLVIIGVLLCIIILIFLKPMMIAFGATDNILDYAMEYTGITSFGVPFLLFSIGANPLVRADGSPKYSMMSIIIGAVLNTILDPIFMFVFGMGIAGAAWATVISQIISALVLALYFPKFKTVKFEWKDFIPQFSAMKIIVSLGISSFIFQFSTMIIQITTNNLLKIYGESSIYGSDIPIAVAGIVAKINVIFIAVVIGIVQGAQPIFSYNYGAKNYGRVRQTMRLLLKVTITISSLIFVVFQVFPVQMISLFGSGSDLYFQFGVKYMRVFLFFMFINGVQIGASTFFPSIGKAVKGVIISLMKQIAVLLPLLIILPKFMGVDGIMFATPVTDFISFIVAVVFLVYEFKKMPRD
>NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6
MRFKIACEVTEGEAFSQDYRRNILRMLKTGLDRYEDIFEDFFGSNKLKKYCWSVYFKNSIFQGDKIYLQGEKKEFFINFSVFDNGDAINIFNAFMNIKYREIDISKELRVKVSNVIKLPTKEVSGEFFRAKVMSPIICRDHNQETGKDSYYTGSEEEFIPIIKRNLYLEMREKYGDYVERDIEKLVIETKELKKTVSKFYGKLIDGSIGIIELQGKNYLLNYIYSAGLGSIRGSGYGLLEIV
>NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1
MSEKIEIRMSNWLFNAGLLGFYNVLGGKVAEEKGEIEISEDGQSLIFDSGMLENFEYKYFDFFLKRYNKILPYGKILDFEDYIDDFLSGKRENFSLKEVDYVNSQIELVKKSLKSNSYQSTYDFVENNGKEKMLNLEKEIKKVKKPKDNVTSETVEEIKEVFGQLKEVMNFFKKTVKNEDGYEKKYLAAKNIVYLIINNSWNGVSFLNRANAAKDVYEEYKSYFVIPAIEYINKDKSKFKYKCSISNMSMENYKNTLGFLNQTGFDIARKPSHVWNFTNDIAITPLIILILSCIPAGFIYEINKGMFVNANFNFDQLERINNGIANSIFVQEQEEKKINLYRNLLKEFETNTNDTKYEISDIQVVRLENETYRFSLLSKNILYLLHENKDKLDRLLGKYYKDYDKYFNLYDETIRELLNNQNLFSLINKLCYYKISKNKSAYYNGLNMSDLVKINMNYIRRLRKMENNEDKRTELSEKDIEMIRTNAYYFRKDYIGKSGNDKKIGGLLYRLQNALRINDVDMFMDALISAHAYAGKGVHKLFNRALIDDEDFQTLGHAFLIGLLEDGKKDDENKDNKKEGNE
>NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MEIKGLTFTAVFLAQSANYGEGIGNVAALKKISRNRGEQYTYISRQAIRYNIIEQLGEKISPVKAEGSGDKKVVQFSAETTIKDYPELDFFGYMKTTKGENSKNRSAIVRLSNAISLETFKGDLEFLTNKGLADRINEFPNIAQSEIHKSYYKYTLTIDLDKIGIDELDDIKLDNKEKTRRVKKLLDTVSLLYRDIRGRREDLKPLFIIGGVYDVKNPFFENIVDVKNNKIAVEKLCSGIYDYIEKDTLCGIVKEQFDNDTEVEIELKKKNVVVYDTPEFFKNIKLKVDEYYDKSN
>NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5
MRAIKLELYQNMVNYKTATSFQLKETYPLPPYSTIIGMVHSLCDFKEYVPMEISVMGSYFSKVNDLYTRYEFKKGNPYEEERHQINVNGFGVNRGVATAELLVDVYLTIHIIPEDQSDESIQKILNAFEKPREYPSLGRREDIVVINKVKEVVIEKKELEEDRTYNKNIFAYIPISFVRKSVIEFGDKSSGVQIPGTRYEITKNYKLQNIGTKSKPKEIRIWEKKDVIYSSDITGLEFEELPIDSEEDIVFCDL
>NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3
MKNQFLAKSTGETILTHTGNLIKNFELLLKLYPNINVDKRLLLLACIYHDLGKINIKFQRKLFKKNDEIQIPHGLLSTAFINSRDLIKEQGFSKSDIKVLAYSVALHHERDLSEIEDKDLKDEVELMNKETFDFTKVLRNLEEEYIRYLKDNRIQEVNNNIRVFNIINDDIKLRVLSKGFYKLHERMYSVDALATKEESMEAFKKYIMVKGLLNKIDYAASSGLTVEYENNFLEKSMNDFLQNVLKKYDSNNDWNDLQKFMINNRDSNVIVVAQTGFGKTEAGLLWIGNNKGFFTLPLRVAINSIYKRIKEQILKDDITKDELTDKLGLLHSDFRSEYLKRFEEKKDKEIEESDFTEERLDEYIGKTKQLSLPLTVCTIDQIFDFVYRAPGFEMKASILAYSKIVIDEIQMYSPNLVASLIYGIKFITDLGGKFAIMTATLPGIIKTLLEKENVSFVTTSPFVNNKIRHKVKIENDVINAEFIKQRYKNNKILVVCNTVKKSKEIYDELKEIGVSGNEINLLHSRFIKKDRFQKENEITKFASPKRFSEKERRIEENIRESGIWIGTQVVEASLDIDFDVLITELSDLNGLFQRMGRCYRSRTLKPEDGYNCFVFTDNCSGIGKSERSVIDEEIHEKSKEKLLNVDGILTEEMKLSMIDEVYSYESLKETQYCQTIEEKLRALKFYIIEYEMSKEKVKEIFRDIHSIDVIPMPIYKENEDEITENIEILQKTYKDCSDIERKKLKLDKIRARNEISQLKVSVPQYDFDESDYNTVEINKYEEIFVMNCDYSFERGIEIIKKSKKLDFEEDLCF
>NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4
MRISGLMINYYFICKRKLWCLAKNINLEETNENVKMGKLIDESRYALETKQIMIEGTVNIDFIRNWKVVHEVKKSKAIEEAAIWQVKYYIYFLKKRGIDIEKGIIDYPEIRERKEVILSEEDEVYLEKVLKDIEQICQSEISPRVINDKVCKKCAYYEYCYI
>NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MSESYFIFSNGELKRKDNVVRITAADGRFKDIKVEMTRDIYLFGEVSLNTKCLNYLATLKIPVHVFNYYGFYTGTFYPKETNVSGKLFVKQVENYTNNEKRIELAQLIIDAASANILRNLRYYQERGKELEEIIEQIKALKKGIFRTENVEELMGIEGTIRKTYYDSWNIIVNQEIDFEKRVKRPPDNMINTMISFLNTLVYTACLSEIYVSQLNPTISYLHSVGERRFSLSLDIAEVFKPLLADRIIFSLLNKKMITEKDFVKDSNYFYMKEKAQKLILKTFNERLETTIRHRDLNRNVSYRRLMRLEAYKLVKHLMEDKKYEGFKIWW
>NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2
MYVILVYDISTDDDGGRISRNIFKICKRYLTNVQKSVFEGEITPVLLRKLYLELRGFIRDDKDSVLLFKSRQEKWLEKEFWGLEDDKTSNFF
>NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein
MKKMLLLLGAITVFILSCVGKEGQSSGKKEESKKKVKIGIMQITTHPALDSAREGFKEAFKEAGLEVVYDEKNANGEITTANLIANNFVNSKVDLIYAIATNTAQAVSNTTEDIPIVFSAITDPESAGILKKNVTGISDRVDIKQQLELLLKIDSKIKKVGIIYNSSEPNSKIQVEDLKKAAKELNLQVVEKSVSQVSEIPQVTDMLIRESDALYLPTDNLVASVVNLITDKAAVAKKIVFGAEAAHVKGGALITQGVDYYEMGKEAGKIAVEILKNNKKPFEMKYKTMELGEITVNSKTLGKLGIKLPEEIRNKVKFIE
>NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein
MKKLLLLILGCLTILACGKQEEVKEKKNDNKSEGKVYKIGITQIVTHPSLDMVKEGFKKAFEEAGIKADFDETNAEGSIPNANLIANKFKSDKKDLILGIATPSAQALANSISDIPILFSAVTDPVSAKILNKNVTGTSDKLDNVGEQLDLLIKLRPETKKIGVLYNPSEQNSLVQVKEIQEKAKERNLAVELQGITSFSEVAQATKILLGKTDALYLPTDNLVVSAVKLIVSEGISAKKPVISSERSSVDQGALFTMGLNYFDLGKRTGEMAIEILKGKPASEIPFETSKKTTLFLNEKTAQAIGIDIKNPVLEGAEIVK

Crispr_ID: NZ_AP019822_3

• CRISPR_ID: NZ_AP019822_3
• CRISPR_location: 940439-940994
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 8 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

Consensus repeat of NZ_AP019822_3

Consensus_repeat	Method
GTTATTAATCGAGCAGACTGTAATGTAAAT	PILER-CR
GTTATTAATCGAGCAGACTGTAATGTAAAT	CRISPRCasFinder
GTTATTAATCGAGCAGACTGTAATGTAAAT	CRT

spacers of NZ_AP019822_3

>3.1|940469|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TAACTTCTTTACTTAATTTTTTCAAAGCTTTATTTT
>3.2|940535|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
CTTCTTCTGTTGCTTTTAAGTAGCTTGCGTCTAAGA
>3.3|940601|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TGAAGAGGACTTCCGCTGGCAATCGACACAGTTGGA
>3.4|940667|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
GAAAGATTTGCAATAGCAATGATTGAGCGAGGTTGG
>3.5|940733|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ATATTTTTAGGCAATGAATTGAATATAAAGTGTTCA
>3.6|940799|35|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TTGTTAGTTTCATTATCTGCTTTGTAAGGACTAAA
>3.7|940864|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ATAAGCACGATCACCTGAGCCTACTCGGTTTCCTACA
>3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT
TTATTAGTGAAGAATGGGATGTTATTAGAACAAG

CRISPR arrays and Neighbor proteins around NZ_AP019822_3

CRISPR arrays

The CRISPR arrays of NZ_AP019822_3

>merge|NZ_AP019822|3|940439-940994|PILER-CR,CRISPRCasFinder,CRT
GTTATTAATCGAGCAGACTGTAATGTAAATTAACTTCTTTACTTAATTTTTTCAAAGCTTTATTTTGTTATTAATCGAGCAGACTGTAATGTAAATCTTCTTCTGTTGCTTTTAAGTAGCTTGCGTCTAAGAGTTATTAATCGAGCAGACTGTAATGTAAATTGAAGAGGACTTCCGCTGGCAATCGACACAGTTGGAGTTATTAATCGAGCAGACTGTAATGTAAATGAAAGATTTGCAATAGCAATGATTGAGCGAGGTTGGGTTATTAATCGAGCAGACTGTAATGTAAATATATTTTTAGGCAATGAATTGAATATAAAGTGTTCAGTTATTAATCGAGCAGACTGTAATGTAAATTTGTTAGTTTCATTATCTGCTTTGTAAGGACTAAAGTTATTAATCGAGCAGACTGTAATGTAAATATAAGCACGATCACCTGAGCCTACTCGGTTTCCTACAGTTATTAATCGAGCAGACTGTAATGTAAATTTATTAGTGAAGAATGGGATGTTATTAGAACAAGGTTATTAATCGAGCAGGCTGTAATGTGAAT

>NZ_AP019822|3|2|940439-940930|PILER-CR
GTTATTAATCGAGCAGACTGTAATGTAAAT	TAACTTCTTTACTTAATTTTTTCAAAGCTTTATTTT
GTTATTAATCGAGCAGACTGTAATGTAAAT	CTTCTTCTGTTGCTTTTAAGTAGCTTGCGTCTAAGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TGAAGAGGACTTCCGCTGGCAATCGACACAGTTGGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	GAAAGATTTGCAATAGCAATGATTGAGCGAGGTTGG
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATATTTTTAGGCAATGAATTGAATATAAAGTGTTCA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TTGTTAGTTTCATTATCTGCTTTGTAAGGACTAAA
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATAAGCACGATCACCTGAGCCTACTCGGTTTCCTACA
GTTATTAATCGAGCAGACTGTAATGTAAAT

>NZ_AP019822|3|3|940439-940994|CRISPRCasFinder
GTTATTAATCGAGCAGACTGTAATGTAAAT	TAACTTCTTTACTTAATTTTTTCAAAGCTTTATTTT
GTTATTAATCGAGCAGACTGTAATGTAAAT	CTTCTTCTGTTGCTTTTAAGTAGCTTGCGTCTAAGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TGAAGAGGACTTCCGCTGGCAATCGACACAGTTGGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	GAAAGATTTGCAATAGCAATGATTGAGCGAGGTTGG
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATATTTTTAGGCAATGAATTGAATATAAAGTGTTCA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TTGTTAGTTTCATTATCTGCTTTGTAAGGACTAAA
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATAAGCACGATCACCTGAGCCTACTCGGTTTCCTACA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TTATTAGTGAAGAATGGGATGTTATTAGAACAAG
GTTATTAATCGAGCAGGCTGTAATGTGAAT

>NZ_AP019822|3|1|940439-940994|CRT
GTTATTAATCGAGCAGACTGTAATGTAAAT	TAACTTCTTTACTTAATTTTTTCAAAGCTTTATTTT
GTTATTAATCGAGCAGACTGTAATGTAAAT	CTTCTTCTGTTGCTTTTAAGTAGCTTGCGTCTAAGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TGAAGAGGACTTCCGCTGGCAATCGACACAGTTGGA
GTTATTAATCGAGCAGACTGTAATGTAAAT	GAAAGATTTGCAATAGCAATGATTGAGCGAGGTTGG
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATATTTTTAGGCAATGAATTGAATATAAAGTGTTCA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TTGTTAGTTTCATTATCTGCTTTGTAAGGACTAAA
GTTATTAATCGAGCAGACTGTAATGTAAAT	ATAAGCACGATCACCTGAGCCTACTCGGTTTCCTACA
GTTATTAATCGAGCAGACTGTAATGTAAAT	TTATTAGTGAAGAATGGGATGTTATTAGAACAAG
GTTATTAATCGAGCAGGCTGTAATGTGAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl|CDD|187770
NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein	unknown	unknown	gnl|CDD|379488
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl|CDD|273860
NZ_AP019822.1|WP_026737456.1|943251_944397_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226605
NZ_AP019822.1|WP_026737457.1|944397_945183_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224026
NZ_AP019822.1|WP_026737460.1|947815_948577_+|nitroreductase-family-protein	unknown	unknown	gnl|CDD|380322
NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223725
NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380548
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl|CDD|274215
NZ_AP019822.1|WP_026737461.1|948733_949999_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl|CDD|273233
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl|CDD|273848
NZ_AP019822.1|WP_026737459.1|946969_947722_+|nitroreductase-family-protein	unknown	unknown	gnl|CDD|380322
NZ_AP019822.1|WP_026737462.1|950024_950621_+|DUF479-domain-containing-protein	unknown	unknown	gnl|CDD|225666
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NZ_AP019822.1|WP_051411745.1|950632_951346_+|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380548
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	cas8b2	pfam09706_cas8b2_CAS-I-B	gnl|CDD|187884
NZ_AP019822.1|WP_026737458.1|945406_946831_-|phospholipase	unknown	unknown	gnl|CDD|197227
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|187856

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	2.6e-70	231.9	1.3
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	3.7e-129	425.2	14.7
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	5.6e-28	92.9	4.8
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	2.1e-51	169.0	10.8
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	cas8b2	pfam09706_cas8b2_CAS-I-B	4e-12	41.2	0.1
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	1.6e-64	212.7	5.7
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	1.5e-24	80.9	0.1
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	1e-22	75.9	3.8

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|187770	cd09639, Cas3_I, CRISPR/Cas system-associated protein Cas3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; DEAD/DEAH box helicase DNA helicase cas3'; Often but not always is fused to HD nuclease domain; signature gene for Type I.	3.35705e-58
NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein	gnl|CDD|379488	pfam14133, DUF4300, Domain of unknown function (DUF4300). This family of lipoproteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 281 and 303 amino acids in length. There are two conserved sequence motifs: NCR and PYQ.	2.90655e-117
NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	6.6577e-20
NZ_AP019822.1|WP_026737456.1|943251_944397_+|ABC-transporter-permease	gnl|CDD|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.43699e-58
NZ_AP019822.1|WP_026737457.1|944397_945183_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	1.68941e-118
NZ_AP019822.1|WP_026737460.1|947815_948577_+|nitroreductase-family-protein	gnl|CDD|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.53481e-64
NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase	gnl|CDD|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	2.27086e-61
NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein	gnl|CDD|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	4.75635e-96
NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	8.53955e-58
NZ_AP019822.1|WP_026737461.1|948733_949999_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl|CDD|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	6.22849e-129
NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.27704e-15
NZ_AP019822.1|WP_026737459.1|946969_947722_+|nitroreductase-family-protein	gnl|CDD|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.0747e-74
NZ_AP019822.1|WP_026737462.1|950024_950621_+|DUF479-domain-containing-protein	gnl|CDD|225666	COG3124, COG3124, Uncharacterized protein conserved in bacteria [Function unknown].	4.29146e-16
NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	4.66619e-160
NZ_AP019822.1|WP_051411745.1|950632_951346_+|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.0002578
NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein	gnl|CDD|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	3.50823e-102
NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.1032e-56
NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1	gnl|CDD|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	2.04143e-11
NZ_AP019822.1|WP_026737458.1|945406_946831_-|phospholipase	gnl|CDD|197227	cd09129, PLDc_unchar2_1, Putative catalytic domain, repeat 1, of uncharacterized phospholipase D-like proteins. Putative catalytic domain, repeat 1, of uncharacterized phospholipase D (PLD, EC 3.1.4.4)-like proteins. PLD enzymes hydrolyze phospholipid phosphodiester bonds to yield phosphatidic acid and a free polar head group. They can also catalyze transphosphatidylation of phospholipids to acceptor alcohols. Members of this subfamily contain two HKD motifs (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the PLD superfamily. The two motifs may be part of the active site and may be involved in phosphatidyl group transfer.	3.69891e-97
NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.95267e-25

Protein sequences

>NZ_AP019822.1|WP_006806652.1|939955_940234_+|CRISPR-associated-endonuclease-Cas2
MYVILVYDISTDDDGGRISRNIFKICKRYLTNVQKSVFEGEITPVLLRKLYLELRGFIRDDKDSVLLFKSRQEKWLEKEFWGLEDDKTSNFF
>NZ_AP019822.1|WP_026737453.1|938961_939954_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MSESYFIFSNGELKRKDNVVRITAADGRFKDIKVEMTRDIYLFGEVSLNTKCLNYLATLKIPVHVFNYYGFYTGTFYPKETNVSGKLFVKQVENYTNNEKRIELAQLIIDAASANILRNLRYYQERGKELEEIIEQIKALKKGIFRTENVEELMGIEGTIRKTYYDSWNIIVNQEIDFEKRVKRPPDNMINTMISFLNTLVYTACLSEIYVSQLNPTISYLHSVGERRFSLSLDIAEVFKPLLADRIIFSLLNKKMITEKDFVKDSNYFYMKEKAQKLILKTFNERLETTIRHRDLNRNVSYRRLMRLEAYKLVKHLMEDKKYEGFKIWW
>NZ_AP019822.1|WP_026737452.1|938442_938931_+|CRISPR-associated-protein-Cas4
MRISGLMINYYFICKRKLWCLAKNINLEETNENVKMGKLIDESRYALETKQIMIEGTVNIDFIRNWKVVHEVKKSKAIEEAAIWQVKYYIYFLKKRGIDIEKGIIDYPEIRERKEVILSEEDEVYLEKVLKDIEQICQSEISPRVINDKVCKKCAYYEYCYI
>NZ_AP019822.1|WP_026737451.1|935974_938416_+|CRISPR-associated-helicase/endonuclease-Cas3
MKNQFLAKSTGETILTHTGNLIKNFELLLKLYPNINVDKRLLLLACIYHDLGKINIKFQRKLFKKNDEIQIPHGLLSTAFINSRDLIKEQGFSKSDIKVLAYSVALHHERDLSEIEDKDLKDEVELMNKETFDFTKVLRNLEEEYIRYLKDNRIQEVNNNIRVFNIINDDIKLRVLSKGFYKLHERMYSVDALATKEESMEAFKKYIMVKGLLNKIDYAASSGLTVEYENNFLEKSMNDFLQNVLKKYDSNNDWNDLQKFMINNRDSNVIVVAQTGFGKTEAGLLWIGNNKGFFTLPLRVAINSIYKRIKEQILKDDITKDELTDKLGLLHSDFRSEYLKRFEEKKDKEIEESDFTEERLDEYIGKTKQLSLPLTVCTIDQIFDFVYRAPGFEMKASILAYSKIVIDEIQMYSPNLVASLIYGIKFITDLGGKFAIMTATLPGIIKTLLEKENVSFVTTSPFVNNKIRHKVKIENDVINAEFIKQRYKNNKILVVCNTVKKSKEIYDELKEIGVSGNEINLLHSRFIKKDRFQKENEITKFASPKRFSEKERRIEENIRESGIWIGTQVVEASLDIDFDVLITELSDLNGLFQRMGRCYRSRTLKPEDGYNCFVFTDNCSGIGKSERSVIDEEIHEKSKEKLLNVDGILTEEMKLSMIDEVYSYESLKETQYCQTIEEKLRALKFYIIEYEMSKEKVKEIFRDIHSIDVIPMPIYKENEDEITENIEILQKTYKDCSDIERKKLKLDKIRARNEISQLKVSVPQYDFDESDYNTVEINKYEEIFVMNCDYSFERGIEIIKKSKKLDFEEDLCF
>NZ_AP019822.1|WP_026737450.1|935185_935950_+|CRISPR-associated-protein-Cas5
MRAIKLELYQNMVNYKTATSFQLKETYPLPPYSTIIGMVHSLCDFKEYVPMEISVMGSYFSKVNDLYTRYEFKKGNPYEEERHQINVNGFGVNRGVATAELLVDVYLTIHIIPEDQSDESIQKILNAFEKPREYPSLGRREDIVVINKVKEVVIEKKELEEDRTYNKNIFAYIPISFVRKSVIEFGDKSSGVQIPGTRYEITKNYKLQNIGTKSKPKEIRIWEKKDVIYSSDITGLEFEELPIDSEEDIVFCDL
>NZ_AP019822.1|WP_026737449.1|934308_935199_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MEIKGLTFTAVFLAQSANYGEGIGNVAALKKISRNRGEQYTYISRQAIRYNIIEQLGEKISPVKAEGSGDKKVVQFSAETTIKDYPELDFFGYMKTTKGENSKNRSAIVRLSNAISLETFKGDLEFLTNKGLADRINEFPNIAQSEIHKSYYKYTLTIDLDKIGIDELDDIKLDNKEKTRRVKKLLDTVSLLYRDIRGRREDLKPLFIIGGVYDVKNPFFENIVDVKNNKIAVEKLCSGIYDYIEKDTLCGIVKEQFDNDTEVEIELKKKNVVVYDTPEFFKNIKLKVDEYYDKSN
>NZ_AP019822.1|WP_026737448.1|932557_934306_+|CRISPR-associated-protein-Cst1
MSEKIEIRMSNWLFNAGLLGFYNVLGGKVAEEKGEIEISEDGQSLIFDSGMLENFEYKYFDFFLKRYNKILPYGKILDFEDYIDDFLSGKRENFSLKEVDYVNSQIELVKKSLKSNSYQSTYDFVENNGKEKMLNLEKEIKKVKKPKDNVTSETVEEIKEVFGQLKEVMNFFKKTVKNEDGYEKKYLAAKNIVYLIINNSWNGVSFLNRANAAKDVYEEYKSYFVIPAIEYINKDKSKFKYKCSISNMSMENYKNTLGFLNQTGFDIARKPSHVWNFTNDIAITPLIILILSCIPAGFIYEINKGMFVNANFNFDQLERINNGIANSIFVQEQEEKKINLYRNLLKEFETNTNDTKYEISDIQVVRLENETYRFSLLSKNILYLLHENKDKLDRLLGKYYKDYDKYFNLYDETIRELLNNQNLFSLINKLCYYKISKNKSAYYNGLNMSDLVKINMNYIRRLRKMENNEDKRTELSEKDIEMIRTNAYYFRKDYIGKSGNDKKIGGLLYRLQNALRINDVDMFMDALISAHAYAGKGVHKLFNRALIDDEDFQTLGHAFLIGLLEDGKKDDENKDNKKEGNE
>NZ_AP019822.1|WP_026737447.1|931810_932539_+|CRISPR-associated-endoribonuclease-Cas6
MRFKIACEVTEGEAFSQDYRRNILRMLKTGLDRYEDIFEDFFGSNKLKKYCWSVYFKNSIFQGDKIYLQGEKKEFFINFSVFDNGDAINIFNAFMNIKYREIDISKELRVKVSNVIKLPTKEVSGEFFRAKVMSPIICRDHNQETGKDSYYTGSEEEFIPIIKRNLYLEMREKYGDYVERDIEKLVIETKELKKTVSKFYGKLIDGSIGIIELQGKNYLLNYIYSAGLGSIRGSGYGLLEIV
>NZ_AP019822.1|WP_154669377.1|930665_931211_+|peptidylprolyl-isomerase
MVFSINSESYSKKMKMDVKIKTNKGEINLRLFPEKSPVTVASFVNLIKHGYYNGLKFHRVIEDFMAQGGDPTGTGMGGPGYRFEDEVKNGLDFSTPGKLAMANAGPGTNGSQFFITTVPTEWLTGKHTIFGEVASDKDLEVVKSLSNGDVMETVTVSGSGIDEFLSKYKDRISEWNKALGY
>NZ_AP019822.1|WP_036056085.1|929627_930542_+|DUF4300-family-protein
MKKRIVISLICGILLVSCSQKIVNNDSDISISQKSNEEKHLKEITYSNLVDKASQEEVRTALKNAGVSEKSIKSFFEGVNYFNNSVENVSLVKNGFKIMEKPSPVYDEVTIQEKWNKKNPKFIGQNCRITAFELMKDFVSVGNPEIKNTEQLFMDQDSLKNFPVKIFTDKEKQQFESLFSSIETENTKDFATHIRKVKEDWEKKNIKFSNKNKISMISVFFHSEITPKESFLFIGHVGVLVPSSDGRFLFIEKLAFQEPYQALKFDNVLQLNDYLLNKYDVEYGQPNARPFIMENGDPLLMYHP
>NZ_AP019822.1|WP_026737454.1|941271_942234_+|ABC-transporter-substrate-binding-protein
MKKMLLLLGAITVFILSCVGKEGQSSGKKEESKKKVKIGIMQITTHPALDSAREGFKEAFKEAGLEVVYDEKNANGEITTANLIANNFVNSKVDLIYAIATNTAQAVSNTTEDIPIVFSAITDPESAGILKKNVTGISDRVDIKQQLELLLKIDSKIKKVGIIYNSSEPNSKIQVEDLKKAAKELNLQVVEKSVSQVSEIPQVTDMLIRESDALYLPTDNLVASVVNLITDKAAVAKKIVFGAEAAHVKGGALITQGVDYYEMGKEAGKIAVEILKNNKKPFEMKYKTMELGEITVNSKTLGKLGIKLPEEIRNKVKFIE
>NZ_AP019822.1|WP_026737455.1|942258_943224_+|ABC-transporter-substrate-binding-protein
MKKLLLLILGCLTILACGKQEEVKEKKNDNKSEGKVYKIGITQIVTHPSLDMVKEGFKKAFEEAGIKADFDETNAEGSIPNANLIANKFKSDKKDLILGIATPSAQALANSISDIPILFSAVTDPVSAKILNKNVTGTSDKLDNVGEQLDLLIKLRPETKKIGVLYNPSEQNSLVQVKEIQEKAKERNLAVELQGITSFSEVAQATKILLGKTDALYLPTDNLVVSAVKLIVSEGISAKKPVISSERSSVDQGALFTMGLNYFDLGKRTGEMAIEILKGKPASEIPFETSKKTTLFLNEKTAQAIGIDIKNPVLEGAEIVK
>NZ_AP019822.1|WP_026737456.1|943251_944397_+|ABC-transporter-permease
MNELLVFMQSLPEAFKTGFIYSIMVMGVYITYKILDFPDLSVDGTFPLGAFIFAGFAMSKNGFFGITHPIMGLVLATVGGMMAGYVTGALHTYLNIEGLLAGIIVMTGLYSINFRIIGGANGFIPDDRSIYEIVSYDKNFVMFTIIFLILLVLKGFYDYKIKKNKYVIRALAVYTIMVIALIVYVFLSKDIKLMLVALIVFILKMILDYILTSKFGFALRALGSNEQLVISLGVNEKRLKIFGLMLSNGFAALSGALYAQSLKAADLQLGFGVLVMGLAAIILGLGIIKKSQAVNEISIVILGSLLYYFIINVALMSNNWTRNLYDALGLSDGLKNVLEIKPTDVKVITAIILTVILWNETAKRIRKSRKKAKLIEKERGI
>NZ_AP019822.1|WP_026737457.1|944397_945183_+|ATP-binding-cassette-domain-containing-protein
MIEIKNLYKTFFSELGTEKQVFNNLNLKVEDGDFITIIGSNGAGKSTLLNVLNGQITPDSGEIILNGKNISNVEKYKRSQWISQVYQNPTQGTAPSMTVMENLSMAKNKGKKFNFTFGLDLKNMKFYEKQLESLGLGLEKQLFTQVGLLSGGQRQCLSLIMATLNHPDILLLDEHTAALDPQTSEIILEKTKEIVEKNNITSLMITHNMQDAINYGNRLIMLHAGEIIFDIKEKDKKNLTVEKLLEMFKEKDAKLSDKDIF
>NZ_AP019822.1|WP_026737458.1|945406_946831_-|phospholipase
MKKSKYTILNIIILLSVLSCVSLPEGLSTKSEVYNADNVDFYYDLTYKKDGKIEYERQIWEQAYEILDNAKEFFLMDIFVFNDYLGKGVREKLNPVDIAEEFAQKILEKRKRDPDVEIYLILDESNTFYGAFDNRTHKKLEEAGVHIGYVDLAKLRDPMPTYSTVWRLFIRPFGNSKNVGKTKNPVYEGTDKVTIRSILRALNAKADHRKLIMNENTAMLTSANPHAEGSRHSNVAFKFSSPIIKDIYSAEQSVAKITKPDGSLKQNLPDKDFSKIPFSNNSKLKLQYFTEGQTVLDISNELANTGTEDKIIIAQFFLADRGIIKSIKKAAKNGADIQIILNNSNSGLPNKAAAGELMKYARKHNYKIEIRFYNKGEEMYHVKMLSIMKKDYMVTYGGSTNFTRRNMRNYNLENELKITSAYDQNISKSILNYYDRLWTNKDAEFTLPYEKNKNEKVINDLLFRFMEINGFGIF
>NZ_AP019822.1|WP_026737459.1|946969_947722_+|nitroreductase-family-protein
MNEVIKQLQNRRSVREFTGEKVKDEDLKLILETAQRYSNWAHGQQTSLIVVRDKEKIKKIAELSGGQKHIEAADVFILILIDFYRVVYAVESIGGEISIPKSVEGLMIGTGDAGIMVNAIQTAAESLGYGTTTIGGVRVNPDAIAEMFDLPEYVFPVFGTTIGVPAENKLKSLKPRVPFESFAFEEKYDKKKVEEGVEKFETEYRKWWDENGFPEVPSYKETMKKYYSNYVKENYQKTEETLRKQGFIQK
>NZ_AP019822.1|WP_026737460.1|947815_948577_+|nitroreductase-family-protein
MNEVIKQLQNRRSVREFTGEKVKDEDLKLILETAQRCPNSVHGQQTSLIVVKDKDKIKKIAELSGGQKQVENADVFVLVLADYYRPYYAAKSIGVEIGVQKSLEGVITGAVDAGIMVEAIQTAAESLGYGTTVIGGIRLNPDAICEMFNLPEYVFPVLGTTIGVPTENKLKTPKPRVSYESFALDEVYDKAKVEEGVENFDADYRKWWDENGLSQMPSYKESIKNYYGNATNERYKKVADTVKKQGFDFDKSE
>NZ_AP019822.1|WP_026737461.1|948733_949999_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
METLREFYKIGNGPSSSHTMGPERAASLFKKRAEEKYGKDLRYKAELYGSLAATGKGHLTDFIIKKTLENAEKDNIEVVFMPEIVYDFHTNGVRFFVYKKDDINFEDPSESALFFSVGGGSIVEAKDGNENLNKNADVEHIYPQKNFKEIMEYCERENITIPQYVERYEGTEIWDYLKEVWNAMDDAVNRGLNTEGYLHGMLHLERKAKMFYEKYLNARFKDVKGRVYSYALAASEENASAGKVVTAPTCGASGLIPAVLKTFQQENGLSEEEIINALAVAGVIGNVYKQNASISGAEVGCQGEVGVACSMGSGMAAYIMGGGLQEIEYAAEIGMEHCLGMTCDPMLGYVQIPCIERNAIYAAKAMDCAQYSLMSGGENHLITLDEVVETMLQTGKDLHSNYKETSLAGLAKLKKAKLNLE
>NZ_AP019822.1|WP_026737462.1|950024_950621_+|DUF479-domain-containing-protein
MNFLGHSMISIEIDEKTDRKTLYGNFTGDFYKGTLEKINLTDELKEGIVLHRIIDDISDRENNFLNDLLREKFGIFKGIVSDMFVDHFLSKNFYRIFNENINDIETKILYNINQYEKYFPEKFERTLSWISSEKILSGYANIDILERAFYGLSKRVKKGEILNSAIKELKKNYGIFEENSVKEFEYVKNESINKFLDK
>NZ_AP019822.1|WP_051411745.1|950632_951346_+|hypothetical-protein
MKKTLITFLILAQGIILAENKPKAAVPVQTQKKAPAAAKKADPKAAVQAKPADSPNTKAPAVPTQQKPVTTTKAAPKTTAKKDEVKKFKTLQEAADDYAKAMQEISNYGSREMLRTVNVDVDKYVGARGDQELTRKWEEINTMLLEQFEVSVYKVNENGNSGEAVFLIKGYDEEALSKYLNDNIDKYAKIKRLKGEVDIDIEAYINLQYNYLKNAKKINIATSTVNFVKTGNEWKKA

Crispr_ID: NZ_AP019822_4

• CRISPR_ID: NZ_AP019822_4
• CRISPR_location: 1006907-1007008
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019822_4

Consensus_repeat	Method
TCATGAGGACTAGCTGTCCTCATA	CRISPRCasFinder

spacers of NZ_AP019822_4

>4.1|1006931|54|NZ_AP019822|CRISPRCasFinder
ATTCTTGCTAACGATTTCAGATTTTAGATGCTCAAAAATGCTCGTTCGCTAAGT

CRISPR arrays and Neighbor proteins around NZ_AP019822_4

CRISPR arrays

The CRISPR arrays of NZ_AP019822_4

>merge|NZ_AP019822|4|1006907-1007008|CRISPRCasFinder
TCATGAGGACTAGCTGTCCTCATAATTCTTGCTAACGATTTCAGATTTTAGATGCTCAAAAATGCTCGTTCGCTAAGTTTATGAGGACTAGCTGTCCTCATA

>NZ_AP019822|4|4|1006907-1007008|CRISPRCasFinder
TCATGAGGACTAGCTGTCCTCATA	ATTCTTGCTAACGATTTCAGATTTTAGATGCTCAAAAATGCTCGTTCGCTAAGT
TTATGAGGACTAGCTGTCCTCATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026737505.1|1005817_1006906_+|O-antigen-ligase-family-protein	unknown	unknown	gnl|CDD|377422
NZ_AP019822.1|WP_026737503.1|1000600_1002001_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl|CDD|225174
NZ_AP019822.1|WP_026737504.1|1003606_1005781_+|U32-family-peptidase	unknown	unknown	gnl|CDD|223896
NZ_AP019822.1|WP_081724179.1|1007361_1007805_+|Abi-family-protein	unknown	unknown	gnl|CDD|377910
NZ_AP019822.1|WP_026737509.1|1008798_1009782_+|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl|CDD|224383
NZ_AP019822.1|WP_026737502.1|1000263_1000575_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_036056092.1|1015589_1016435_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_AP019822.1|WP_006807307.1|1002894_1003461_-|hypothetical-protein	unknown	unknown	gnl|CDD|368573
NZ_AP019822.1|WP_006807319.1|1002327_1002783_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026737513.1|1014339_1015542_+|aspartate-kinase	unknown	unknown	gnl|CDD|235843
NZ_AP019822.1|WP_026737500.1|997390_998164_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213224
NZ_AP019822.1|WP_026737501.1|998920_1000123_+|amidohydrolase	unknown	unknown	gnl|CDD|349882
NZ_AP019822.1|WP_026737510.1|1009970_1010237_+|30S-ribosomal-protein-S20	unknown	unknown	gnl|CDD|178943
NZ_AP019822.1|WP_006807349.1|1002107_1002338_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_051411750.1|998259_998802_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_AP019822.1|WP_026737511.1|1010926_1012303_-|MATE-family-efflux-transporter	unknown	unknown	gnl|CDD|240543
NZ_AP019822.1|WP_026737515.1|1016454_1017339_+|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl|CDD|235107
NZ_AP019822.1|WP_026737512.1|1012960_1014268_+|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501
NZ_AP019822.1|WP_026737507.1|1007792_1008227_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026737508.1|1008304_1008667_-|DUF4870-domain-containing-protein	unknown	unknown	gnl|CDD|227155

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_026737505.1|1005817_1006906_+|O-antigen-ligase-family-protein	gnl|CDD|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	8.99106e-08
NZ_AP019822.1|WP_026737503.1|1000600_1002001_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl|CDD|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	8.41338e-125
NZ_AP019822.1|WP_026737501.1|998920_1000123_+|amidohydrolase	gnl|CDD|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	2.60668e-147
NZ_AP019822.1|WP_081724179.1|1007361_1007805_+|Abi-family-protein	gnl|CDD|377910	pfam07751, Abi_2, Abi-like protein. This family, found in various bacterial species, contains sequences that are similar to the Abi group of proteins, which are involved in bacteriophage resistance mediated by abortive infection in Lactococcus species. The proteins are thought to have helix-turn-helix motifs, found in many DNA-binding proteins, allowing them to perform their function.	1.8654e-26
NZ_AP019822.1|WP_026737509.1|1008798_1009782_+|DNA-polymerase-III-subunit-delta	gnl|CDD|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	7.9378e-15
NZ_AP019822.1|WP_006807307.1|1002894_1003461_-|hypothetical-protein	gnl|CDD|368573	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. Amidase_YiiX is a family of permuted papain-like amidases. It has amidase specificity for the amide bond between a lipid and an amino acid (or peptide). From the structure, a tetramer, each monomer is made up of a layered alpha-beta fold with a central, 6-stranded, antiparallel beta-sheet that is protected by helices on either side. The catalytic Cys154 in UniProtKB:Q74NK7, Structure 3kw0, is located on the N-terminus of helix alphaF. The two additional helices located above Cys154 contribute to the formation of the active site, where the lysine ligand is bound.	4.49054e-10
NZ_AP019822.1|WP_026737513.1|1014339_1015542_+|aspartate-kinase	gnl|CDD|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	1.0019e-177
NZ_AP019822.1|WP_026737500.1|997390_998164_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213224	cd03257, ABC_NikE_OppD_transporters, ATP-binding cassette domain of nickel/oligopeptides specific transporters. The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.	5.12366e-89
NZ_AP019822.1|WP_026737504.1|1003606_1005781_+|U32-family-peptidase	gnl|CDD|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	2.03208e-91
NZ_AP019822.1|WP_026737510.1|1009970_1010237_+|30S-ribosomal-protein-S20	gnl|CDD|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	5.08682e-24
NZ_AP019822.1|WP_026737508.1|1008304_1008667_-|DUF4870-domain-containing-protein	gnl|CDD|227155	COG4818, COG4818, Predicted membrane protein [Function unknown].	6.22179e-05
NZ_AP019822.1|WP_051411750.1|998259_998802_-|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.38252e-07
NZ_AP019822.1|WP_026737511.1|1010926_1012303_-|MATE-family-efflux-transporter	gnl|CDD|240543	cd13138, MATE_yoeA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	1.55065e-110
NZ_AP019822.1|WP_026737515.1|1016454_1017339_+|4-hydroxy-tetrahydrodipicolinate-synthase	gnl|CDD|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	9.3638e-167
NZ_AP019822.1|WP_026737512.1|1012960_1014268_+|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	4.32798e-155
NZ_AP019822.1|WP_036056092.1|1015589_1016435_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.50765e-97

Protein sequences

>NZ_AP019822.1|WP_026737505.1|1005817_1006906_+|O-antigen-ligase-family-protein
MEIIKNRNYIEKMYMLLGGAIFTHYVLVIVLCILLLKDIFVTGEYKKILKDKSLVIVEAVLGLSIITSLFYKNYYGLIAIPMLLCIMVGRYYTRIVSDDFKNYNLELMAKFSGTAFFISLIECLITKDRAGYFSYLNPNYLGNIMVMAAVVNLYLALKKRTKLNFLIFILNFMTIVMSGSRSALAAAIIGIFVLLYYFLEKKAFFICVLFLISYIAGVYCDFLPFLREDSISKYYGLRKDILKMALRAFKSNILFGHGNFYYFKYTKFYPHSHNAVTELLISYGLIGTVALMTVWLKYIYDIFKDDKSNVLKISILLGVVAHNLTDFPIFWIQTVLLFIMILSCWENKDEVKKLRFHSRNIK
>NZ_AP019822.1|WP_026737504.1|1003606_1005781_+|U32-family-peptidase
MNIVAPAGNYEKLEAAIKAGANEVYFGLKGFGARRNNENLSIKEILDGIDYAHSRGIRTLIALNTVMKDVEIDAAYKYISKIYEHGLDAVIVQDLGFMSFLKENFPKLALHGSTQMTVANHVEANKLKELGLSRVVLAREMSFEEIKSIREKTDIELEIFVSGSLCISYSGNCYISSFIGGRSGNRGLCAYSCRKKFEDEEGNKAYFLSPNDQLLQTEEINKLKDIGINAIKVEGRKKSSEYVYETVSYYDNILKGKPRPTESYKLFNRGYSKGYFYLDNKLMNFKYSSNFGYFLGARIENSNNFRIDDELILGDGIQFVDSDFEKISGEYVNKLIVNGKKVQKADKDDIVSVGKLPDKTKYIYKNYSKEINDRIIHNIKVSKRFASIDGELFAEKGQEIMLKFSIYNLKDEKIEVLKKGNVIEQDAKKEITKEQIAEKLGELGDTTFELNSLKINYDGKSFIPFSELKSLKRECVSELQEKLVNSYRKKLEEKKVKTFKGKCNTEPIFSALVSNEEQEKACREAGIEKIYHKQYDVAKEKNLHKTDKIKTDSNLASNLYQVAMGEKNNINGQSSDWNLNVFNNYTLDLFSQFPNLETVFLSPELNYKQLKMIKSDKVKIGMIIYGYLKGMYIEHKIFDKEYKELQGEFYDKYKILKNDLDNIELYLDKPMNLIPKLDQIKEFNFDELRLDFTFETAEEVKKIIKSLQTKKGNYNPYSFERGVF
>NZ_AP019822.1|WP_006807307.1|1002894_1003461_-|hypothetical-protein
MNLNRIIKKIVLLLIPVLFLISCKSIDPAYKWYSAKEVIAKSDQLQPGDILILSKRNTIRSMWGHVAVLNEEKKIVEFPSYSAGYSESPLFVWQKIDRQISVFRLKGIDDDYKNALFEEINKTVNKPYGLTFHKNFDKRLYCSQFVYLVFKKAGKKVGRNVDLDSNNGGWVMPFDIMRSPLLENVILE
>NZ_AP019822.1|WP_006807319.1|1002327_1002783_+|hypothetical-protein
MSDNENQLENIKIENKETEMVERLRDVPKILSQLNGTVEREFSGPLPLEVLQNLSQENKDKLVNNFINQETKEHEANMKVLELIGDKNNKDFSLKRLSLIIGIPGFLILTGICLFSGNKDVLLEILKITFAFLGGTGFGYYIKRDKDSERS
>NZ_AP019822.1|WP_006807349.1|1002107_1002338_+|hypothetical-protein
MDILYRKHMNLYGSSFLKEYTRVSKLTEELNKKIGLPIYKVTIDVLNSELKVENRFSGKKKMKFSHSMKGNLNYVR
>NZ_AP019822.1|WP_026737503.1|1000600_1002001_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MDISEKKYKTGQKLEIEIEKIVFGGEGLGRIDGFTIFVPMSVPGDVLEIEIISVKKSYARGLITKIIKPGKNRIDDISKVSFEDFDGCDFGMLKYEKQLEYKNEMLKEVLEKIGEINIENIELESIIGSDIKTNYRNKTAEPVFKKDGKIMTGFYSKKSHDTFSASESLLKSKIAEDIINKFLKEINSFSGTKNEFKVYNEITNTGFLKHVIVRNNEKNEVMLIITVSKKSQYKQLVKVLEKLYEENESLKSVYISVKKEANNVILGEETRHLLGNEYLEEEIEEIRFKIYPDSFFQINKSQAIKLYDKAIEFLGESVHKTVIDAFSGTGTIAMALSSKVKKAIGIESVESSVIAANQTAEENNIKNVEFIKGKVERVLPDVLKKEGNSVEAIIFDPPRRGIDEKALKSSAKNKIPKIVYISCNPSTFARDCKLLMENGYTLKKVSAVDMFPQVNHIEIVGLLERK
>NZ_AP019822.1|WP_026737502.1|1000263_1000575_+|hypothetical-protein
MDSSYRGTNARDNAFIVIWYEKSGISVPFMQCTSEYPKQSFFRKIFGLSEELRIDSYNVEIGTGEKIYRKVVNTKEEIKNLFKNFYETGNIPDISDWEDTGIL
>NZ_AP019822.1|WP_026737501.1|998920_1000123_+|amidohydrolase
MNSKEINDFIKQNTEKIYDEIVKIRRKIHMNPELGDEEFETGKTIKDFLKENGIEYEEVINTGVVATIYNGEGKTVATRADIDALPIFEENDVEYKSKIDGKMHACGHDGHTSVQLGVAKILADNKDKWKGTVRFFFQPAEETNGGADRMIKAGALKFKRDENRKIDAFFALHMAPEIETGKIGIKYGKAHATSAMFRLTINGVSAHAAQPQKGVDAILIGAKVLEFLQSIVSRRIDPREEAVITVGSFKGGEAENVVCDKVDMLGTIRTMSKEIRTFIIETIKKDLSKFVESLGGKADIRIREGYAPVINNEEITKKVEQNIVDLYGKDSLEIIKEARMDVEDVSYFLNEINGCFFRLGTRNEEKGLIYDLHHPKFNIDEESLKIGIGLQLKNILEFLK
>NZ_AP019822.1|WP_051411750.1|998259_998802_-|GNAT-family-N-acetyltransferase
MKLIKTKKPKHLMNIYKLYLKAFPKNERKPFPFILLKQWRGTTEILSIKNSTGEFAGLAIAAIHNDLVLLAYFAVSSTQRGGGIGSKALQLLKERYADKKLFLEIENTDTDAPNIEERKKRKNFYLKNGMKEMPFIINFFGTEMEIMTYNSDIIFDEYHSVYKKEFGKYISRKVKFVRYK
>NZ_AP019822.1|WP_026737500.1|997390_998164_+|ABC-transporter-ATP-binding-protein
MTKLMINNVNKYYNKKLILSNINLSVSERECVGIMGESGSGKSTLAKLIVGLEPLDEGDMILDGISYKSLSKKEMKKIYRKVQMVFQNALGAVNPRFTIEEILLEPLRIHYKKTLSYEEIKKRATDLLEKVGLRAEFLSRKATELSGGQLQRVCIARALILEPEIIVFDESVSGLNPVVQQQILELLAELRETMNLTYVFISHDFEACYYLCDKVVIMESGEIKDVISDLDSPIVINNERVKKIVGKSLNHIEYIEK
>NZ_AP019822.1|WP_081724179.1|1007361_1007805_+|Abi-family-protein
MLSIESYYALINGYKDIFLESFKSEIYQENVYFENIFMLFNFDRELRMILLKYILIVERTIKTKISYHFSMKYDDKYLNANNFDYNNRRKSLQILRLIYNMSKVKRIYSEVNSSIYHYQKIHDKIPLWVLVEKLNFGIISHFFYCLI
>NZ_AP019822.1|WP_026737507.1|1007792_1008227_+|hypothetical-protein
MLDLKDQNAIVKEIFEDYKEEYNYNKKSILNPAETSEILFFICNFRNKCAHDERIYQHKHKFTSGKSPNPFIFKDKNIKFNNDVFALIVSLKIFLIKENYIEMINKINELISKLPALLPNHYKKILNKMGFSNDWENIMLEIIK
>NZ_AP019822.1|WP_026737508.1|1008304_1008667_-|DUF4870-domain-containing-protein
MSSNIKEQASIGGLRANAAAALINLSFFLPGLGFLISLLALILETKNQFVRTYAKQTLALGMLLFVSVFLNVFIFIGNAAFVIITFVLSIVQIIAIIKSFLGQEFEIPYIKKVSELLFVD
>NZ_AP019822.1|WP_026737509.1|1008798_1009782_+|DNA-polymerase-III-subunit-delta
MIYFIGGTKHREFRYFDLLEKIRKENPGISESFFDVDIKEEEKFLEKVSFNSIFSTEELIVLRRAEKLKDLEKTLDYIANLDIVGKEIIIDYFKEDGKTGVKLSKKLEELKKNGKLEVYLFPKEDDGEIKKYIKKELGISEKDTAMLLEMIGNDPFKVKNEVEKIKIYLNGDSFNMQEMKKIVSVEKEYRIYETVDKILNNKAAEVIDYLEKTKEYMGVLYSLYGELEVMYKLSCLRSSGMKFSSNYAVFKNEFEGIKEIFKTNNRLPNPYVIFMKFPKLKNYTAKNLRRLVFRCWEVEKDIKTGKIEMESGIETLIMETADLYVKK
>NZ_AP019822.1|WP_026737510.1|1009970_1010237_+|30S-ribosomal-protein-S20
MAHSKSSKKRIFIGERNASRNQAIKSRVKTFVKKVLSAVEAKNVDEAKTALQVAYKELDKAVTKGVLKKNTASRKKSRLALKVNSLAS
>NZ_AP019822.1|WP_026737511.1|1010926_1012303_-|MATE-family-efflux-transporter
MIFKAQTAEERRKMILNGNILNTLLFLSVPTLLVGAIQAFIPLSDGLFLNNIAGVVTASAVTFSQPVLNIMIALSQGLGAAAMAMIGQLYGRGVIKAVKEVTLQVFVFGFVIGLILIPVCIGAGYLVSANITSEIKHEVFVYISLYSLVMPLVFMTAIYNSAKNAVGRPEVTFIRVFILLFLKIIFNTVFLYFFEMKIVGAVMASLFSYIIISVWMYHDLFIKNTDMKLDLKKYHLNLPIVARLFKIGFPSMLSYMLIQTGFVLINKEVDKYDAISLNAQGIASNINSICFILPSAIGTTVTTMISMNMGIGEIKKAKKIFTYGWITSVVIALLTIGMIVPLAGKITVLFTRNKEVLDIANHALNIYTYSVIGFGVFSVCQGVFIALGRTKVPLFMAILRIWFFRYLFILFTQKFLGVYAVFWGNLFSNTLAAILFFCLVKKLDWNINPAKIQKKKLK
>NZ_AP019822.1|WP_026737512.1|1012960_1014268_+|diaminopimelate-decarboxylase
MKLFGTSKINENGNLSIGGVDTTELVKDFKTPLYVMDQELIETTIDKMKKAFVSSRFDTHIAYAGKAFFTTGMAKIIEAKDLELDVVSGGELYTAYKAGFPMNKVHMHGNNKSYEELEMAIDLEIKQIVIDNEDEIGKIEKICKEKNKKQAVLLRIDPGIEAHTHHYIKTSGLTSKFGISLFQKDLLDIIKRINDSEYLEFRGFHTHIGSQIFQSIFFIFALEEIFKYLDKLKKELGIVVHTVNMGGGFGVYYKEGDDPVPVEEVLKEIITYTEAMEIKYKIGFKELCIEPGRSIVGNAGTTLYEVGGIKKTVGGKTYVFVNGGMADNIRPALYQAEYEAGIINKLDKEATSEVTVAGKFCESGDILIEKTKIQEAHVGDILAMTTTGAYCYTMSSNYNRFTKPAVVFVKDGKAKLAVKRETFEDLIRNDEIFEL
>NZ_AP019822.1|WP_026737513.1|1014339_1015542_+|aspartate-kinase
MIIVHKYGGSSVATTEKIMNIAKYLGKVKDEKNDVVVVVSAMGKTTDTLIKLAHEITGDPDKREMDRLMSTGEQQTIALLSIALQSLGYDAISLTGRQAGIRTSGHHTKNRIESIDEKKIKKHLEEGKIVIIAGFQGVNENGDVATLGRGGSDTSAVALAAALNGKCEIYTDVDGVYSVDPRIYPEAKKISYISYDEMMELAFLGAGVMETRAVELGKKYGVEIYVGKSLGEKNGTVITAKEKIMEEKVITGISVNEDILMVNIEEIPTYAKNVYAILEQAVKFGVNIGVISQNDVSSEHGSFAFTCPQSDKASLEKISEILKEKFERISVIINPYVTKVSIVGIGLISNIGIAARVFKVLADNNISFHQVATSEISIGLIVDEVMGKKVAELLAKEFNV
>NZ_AP019822.1|WP_036056092.1|1015589_1016435_+|diaminopimelate-epimerase
MLKFEKYQGAGNDFIIVNEKDLIEKGIPDYNQFASEVCCRHFGIGADGLLILKYVANMPFMFYYNSDGSQAPMCGNGIRCFALYLKNNNVEQEDIFTVKTLSGDLKIETKTENETFFAKVNMGEPVFDVKKLINIEKERFMREKIVIDEKEIEISYIFMGTDHSVIFVNDFSDYDIDDLGSKIENYTEIFPKKVNVNFVKVHDRSNIEVITWERGAGRTLACGTGATASAVLARIYGYVEDRINVTVPGGKLVIDYAGYGSEAYMTGTSEKIAEGHYIFKR
>NZ_AP019822.1|WP_026737515.1|1016454_1017339_+|4-hydroxy-tetrahydrodipicolinate-synthase
MKFEGSYVALITPFKENGEVDEEKIRELVNYHIENGTAGIVPCGTTGEAPTLTFSEHEKVIKIVVEEVKGRIKVIAGAGSNNTDRAVELTKYAKELGADAALSTCPYYNKPTQRGLYEHYKKIAEEAKFPVMLYNVPGRTGINIEAETVARLAEIPEIVAIKEATGSLEQMIKIQDLCGNRIEILSGEDHLILPMLSIGAKGVVSVVANIMPKEMSDLIASFLNKEYEKAFELHTKLYEVSRNMFIEGNPVTVKAAMNILGQIGNDSVRLPLVSAEHKTKDRLTKFFKERGIIK

Crispr_ID: NZ_AP019822_5

• CRISPR_ID: NZ_AP019822_5
• CRISPR_location: 1890473-1892154
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 25 spacers
• Cas_protein_info: PD-DExK,cas10,csm3gr7,csm4gr5

Consensus repeat of NZ_AP019822_5

Consensus_repeat	Method
GTTTTTAATAGAGCATTGTGTAATGTAAAT	PILER-CR
ATTTACATTACACAATGCTCTATTAAAAAC	CRISPRCasFinder
ATTTACATTACACAATGCTCTATTAAAAAC	CRT

spacers of NZ_AP019822_5

>5.1|1890503|35|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TATTTAGTAGGGATACTTATTCATTCACTTTATAA
>5.2|1890568|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AACATTTTGAAGAAAATAAAATAAGAGTATTTTGCG
>5.3|1890634|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
CTACAGGCAAGTGGAGAACATTATATATTACTATAG
>5.4|1890700|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ATATACTCAATCTTGGTTGAATAAATGGTTGATGGGC
>5.5|1890767|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TCAAGGGATTGGGAAAAGTACCTTTTTAGCGAAGTT
>5.6|1890833|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AACAGATATTTTAGCATACTCTATATGTTCAAATAT
>5.7|1890899|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AACAGATATTTTAGCATACTCTATATGTTCAAATAT
>5.8|1890965|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ATCCCAATTAATACGTACCGCTTTTATTCCTGAAAT
>5.9|1891031|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AGTAATCCTGTGGTGGAAGTATTTAATATTAATAAAG
>5.10|1891098|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TGTATTTGTGTATTCGCTTTTAGGCTCAAAGCCACT
>5.11|1891164|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ACAATTTTTAGCAACTGGAAAAGTTGTTTTTGACAC
>5.12|1891230|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
GAGGAAAAGGAAGACCTAAAGGAATAGAAAAGCCTG
>5.13|1891296|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
CTATCACATATTTTTTACTGTGCATAAATCCTGCAG
>5.14|1891362|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
CTTGAAATATGCAACCAAGGTAACAAGATATAAGAA
>5.15|1891428|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ACAAAGAGATAATCTCTTTTTCGCCTTTATTTTCTT
>5.16|1891494|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TATAGCCACTTCATTAAAAGCTATTTTTCTAAAAAC
>5.17|1891560|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AAAATAGTCAAAATCGATACTGTAATTTATTTTTGA
>5.18|1891626|35|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TGAAATAAAAAGTAAAAAGAAACATACTAAATTGA
>5.19|1891691|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TAATTTCGCTCATAAAGACTTAAATTTTATTGTAAT
>5.20|1891757|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TTTCCAAACTTCTATTAATAGAATGGGAAATTACTGT
>5.21|1891824|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
>5.22|1891891|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
>5.23|1891958|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
AAAGGATCTCCTTCAACTCCTGCACTTTTTTCAAAT
>5.24|1892024|35|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
TGTTGTTGTTACTTTTATTTCTCTTTTAGTTACTT
>5.25|1892089|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT
ACTCCAAAGTTGATATTGATGAATTAACTAACGAAC

CRISPR arrays and Neighbor proteins around NZ_AP019822_5

CRISPR arrays

The CRISPR arrays of NZ_AP019822_5

>merge|NZ_AP019822|5|1890473-1892154|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTACACAATGCTCTATTAAAAACTATTTAGTAGGGATACTTATTCATTCACTTTATAAATTTACATTACACAATGCTCTATTAAAAACAACATTTTGAAGAAAATAAAATAAGAGTATTTTGCGATTTACATTACACAATGCTCTATTAAAAACCTACAGGCAAGTGGAGAACATTATATATTACTATAGATTTACATTACACAATGCTCTATTAAAAACATATACTCAATCTTGGTTGAATAAATGGTTGATGGGCATTTACATTACACAATGCTCTATTAAAAACTCAAGGGATTGGGAAAAGTACCTTTTTAGCGAAGTTATTTACATTACACAATGCTCTATTAAAAACAACAGATATTTTAGCATACTCTATATGTTCAAATATATTTACATTACACAATGCTCTATTAAAAACAACAGATATTTTAGCATACTCTATATGTTCAAATATATTTACATTACACAATGCTCTATTAAAAACATCCCAATTAATACGTACCGCTTTTATTCCTGAAATATTTACATTACACAATGCTCTATTAAAAACAGTAATCCTGTGGTGGAAGTATTTAATATTAATAAAGATTTACATTACACAATGCTCTATTAAAAACTGTATTTGTGTATTCGCTTTTAGGCTCAAAGCCACTATTTACATTACACAATGCTCTATTAAAAACACAATTTTTAGCAACTGGAAAAGTTGTTTTTGACACATTTACATTACACAATGCTCTATTAAAAACGAGGAAAAGGAAGACCTAAAGGAATAGAAAAGCCTGATTTACATTACACAATGCTCTATTAAAAACCTATCACATATTTTTTACTGTGCATAAATCCTGCAGATTTACATTACACAATGCTCTATTAAAAACCTTGAAATATGCAACCAAGGTAACAAGATATAAGAAATTTACATTACACAATGCTCTATTAAAAACACAAAGAGATAATCTCTTTTTCGCCTTTATTTTCTTATTTACATTACACAATGCTCTATTAAAAACTATAGCCACTTCATTAAAAGCTATTTTTCTAAAAACATTTACATTACACAATGCTCTATTAAAAACAAAATAGTCAAAATCGATACTGTAATTTATTTTTGAATTTACATTACACAATGCTCTATTAAAAACTGAAATAAAAAGTAAAAAGAAACATACTAAATTGAATTTACATTACACAATGCTCTATTAAAAACTAATTTCGCTCATAAAGACTTAAATTTTATTGTAATATTTACATTACACAATGCTCTATTAAAAACTTTCCAAACTTCTATTAATAGAATGGGAAATTACTGTATTTACATTACACAATGCTCTATTAAAAACGAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATAATTTACATTACACAATGCTCTATTAAAAACGAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATAATTTACATTACACAATGCTCTATTAAAAACAAAGGATCTCCTTCAACTCCTGCACTTTTTTCAAATATTTACATTACACAATGCTCTATTAAAAACTGTTGTTGTTACTTTTATTTCTCTTTTAGTTACTTATTTACATTACACAATGCTCTATTAAAAACACTCCAAAGTTGATATTGATGAATTAACTAACGAACATTTACATTACACAATGCTCTATTAAAAAC

>NZ_AP019822|5|3|1890473-1892154|PILER-CR
ATTTACATTACACAATGCTCTATTAAAAAC	TATTTAGTAGGGATACTTATTCATTCACTTTATAA
ATTTACATTACACAATGCTCTATTAAAAAC	AACATTTTGAAGAAAATAAAATAAGAGTATTTTGCG
ATTTACATTACACAATGCTCTATTAAAAAC	CTACAGGCAAGTGGAGAACATTATATATTACTATAG
ATTTACATTACACAATGCTCTATTAAAAAC	ATATACTCAATCTTGGTTGAATAAATGGTTGATGGGC
ATTTACATTACACAATGCTCTATTAAAAAC	TCAAGGGATTGGGAAAAGTACCTTTTTAGCGAAGTT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	ATCCCAATTAATACGTACCGCTTTTATTCCTGAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	AGTAATCCTGTGGTGGAAGTATTTAATATTAATAAAG
ATTTACATTACACAATGCTCTATTAAAAAC	TGTATTTGTGTATTCGCTTTTAGGCTCAAAGCCACT
ATTTACATTACACAATGCTCTATTAAAAAC	ACAATTTTTAGCAACTGGAAAAGTTGTTTTTGACAC
ATTTACATTACACAATGCTCTATTAAAAAC	GAGGAAAAGGAAGACCTAAAGGAATAGAAAAGCCTG
ATTTACATTACACAATGCTCTATTAAAAAC	CTATCACATATTTTTTACTGTGCATAAATCCTGCAG
ATTTACATTACACAATGCTCTATTAAAAAC	CTTGAAATATGCAACCAAGGTAACAAGATATAAGAA
ATTTACATTACACAATGCTCTATTAAAAAC	ACAAAGAGATAATCTCTTTTTCGCCTTTATTTTCTT
ATTTACATTACACAATGCTCTATTAAAAAC	TATAGCCACTTCATTAAAAGCTATTTTTCTAAAAAC
ATTTACATTACACAATGCTCTATTAAAAAC	AAAATAGTCAAAATCGATACTGTAATTTATTTTTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TGAAATAAAAAGTAAAAAGAAACATACTAAATTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TAATTTCGCTCATAAAGACTTAAATTTTATTGTAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TTTCCAAACTTCTATTAATAGAATGGGAAATTACTGT
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	AAAGGATCTCCTTCAACTCCTGCACTTTTTTCAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TGTTGTTGTTACTTTTATTTCTCTTTTAGTTACTT
ATTTACATTACACAATGCTCTATTAAAAAC	ACTCCAAAGTTGATATTGATGAATTAACTAACGAAC
ATTTACATTACACAATGCTCTATTAAAAAC

>NZ_AP019822|5|5|1890473-1892154|CRISPRCasFinder
ATTTACATTACACAATGCTCTATTAAAAAC	TATTTAGTAGGGATACTTATTCATTCACTTTATAA
ATTTACATTACACAATGCTCTATTAAAAAC	AACATTTTGAAGAAAATAAAATAAGAGTATTTTGCG
ATTTACATTACACAATGCTCTATTAAAAAC	CTACAGGCAAGTGGAGAACATTATATATTACTATAG
ATTTACATTACACAATGCTCTATTAAAAAC	ATATACTCAATCTTGGTTGAATAAATGGTTGATGGGC
ATTTACATTACACAATGCTCTATTAAAAAC	TCAAGGGATTGGGAAAAGTACCTTTTTAGCGAAGTT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	ATCCCAATTAATACGTACCGCTTTTATTCCTGAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	AGTAATCCTGTGGTGGAAGTATTTAATATTAATAAAG
ATTTACATTACACAATGCTCTATTAAAAAC	TGTATTTGTGTATTCGCTTTTAGGCTCAAAGCCACT
ATTTACATTACACAATGCTCTATTAAAAAC	ACAATTTTTAGCAACTGGAAAAGTTGTTTTTGACAC
ATTTACATTACACAATGCTCTATTAAAAAC	GAGGAAAAGGAAGACCTAAAGGAATAGAAAAGCCTG
ATTTACATTACACAATGCTCTATTAAAAAC	CTATCACATATTTTTTACTGTGCATAAATCCTGCAG
ATTTACATTACACAATGCTCTATTAAAAAC	CTTGAAATATGCAACCAAGGTAACAAGATATAAGAA
ATTTACATTACACAATGCTCTATTAAAAAC	ACAAAGAGATAATCTCTTTTTCGCCTTTATTTTCTT
ATTTACATTACACAATGCTCTATTAAAAAC	TATAGCCACTTCATTAAAAGCTATTTTTCTAAAAAC
ATTTACATTACACAATGCTCTATTAAAAAC	AAAATAGTCAAAATCGATACTGTAATTTATTTTTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TGAAATAAAAAGTAAAAAGAAACATACTAAATTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TAATTTCGCTCATAAAGACTTAAATTTTATTGTAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TTTCCAAACTTCTATTAATAGAATGGGAAATTACTGT
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	AAAGGATCTCCTTCAACTCCTGCACTTTTTTCAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TGTTGTTGTTACTTTTATTTCTCTTTTAGTTACTT
ATTTACATTACACAATGCTCTATTAAAAAC	ACTCCAAAGTTGATATTGATGAATTAACTAACGAAC
ATTTACATTACACAATGCTCTATTAAAAAC

>NZ_AP019822|5|2|1890473-1892154|CRT
ATTTACATTACACAATGCTCTATTAAAAAC	TATTTAGTAGGGATACTTATTCATTCACTTTATAA
ATTTACATTACACAATGCTCTATTAAAAAC	AACATTTTGAAGAAAATAAAATAAGAGTATTTTGCG
ATTTACATTACACAATGCTCTATTAAAAAC	CTACAGGCAAGTGGAGAACATTATATATTACTATAG
ATTTACATTACACAATGCTCTATTAAAAAC	ATATACTCAATCTTGGTTGAATAAATGGTTGATGGGC
ATTTACATTACACAATGCTCTATTAAAAAC	TCAAGGGATTGGGAAAAGTACCTTTTTAGCGAAGTT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	AACAGATATTTTAGCATACTCTATATGTTCAAATAT
ATTTACATTACACAATGCTCTATTAAAAAC	ATCCCAATTAATACGTACCGCTTTTATTCCTGAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	AGTAATCCTGTGGTGGAAGTATTTAATATTAATAAAG
ATTTACATTACACAATGCTCTATTAAAAAC	TGTATTTGTGTATTCGCTTTTAGGCTCAAAGCCACT
ATTTACATTACACAATGCTCTATTAAAAAC	ACAATTTTTAGCAACTGGAAAAGTTGTTTTTGACAC
ATTTACATTACACAATGCTCTATTAAAAAC	GAGGAAAAGGAAGACCTAAAGGAATAGAAAAGCCTG
ATTTACATTACACAATGCTCTATTAAAAAC	CTATCACATATTTTTTACTGTGCATAAATCCTGCAG
ATTTACATTACACAATGCTCTATTAAAAAC	CTTGAAATATGCAACCAAGGTAACAAGATATAAGAA
ATTTACATTACACAATGCTCTATTAAAAAC	ACAAAGAGATAATCTCTTTTTCGCCTTTATTTTCTT
ATTTACATTACACAATGCTCTATTAAAAAC	TATAGCCACTTCATTAAAAGCTATTTTTCTAAAAAC
ATTTACATTACACAATGCTCTATTAAAAAC	AAAATAGTCAAAATCGATACTGTAATTTATTTTTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TGAAATAAAAAGTAAAAAGAAACATACTAAATTGA
ATTTACATTACACAATGCTCTATTAAAAAC	TAATTTCGCTCATAAAGACTTAAATTTTATTGTAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TTTCCAAACTTCTATTAATAGAATGGGAAATTACTGT
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	GAAAGAGAAGTTATAAATCATTACCTTAGTTTGGATA
ATTTACATTACACAATGCTCTATTAAAAAC	AAAGGATCTCCTTCAACTCCTGCACTTTTTTCAAAT
ATTTACATTACACAATGCTCTATTAAAAAC	TGTTGTTGTTACTTTTATTTCTCTTTTAGTTACTT
ATTTACATTACACAATGCTCTATTAAAAAC	ACTCCAAAGTTGATATTGATGAATTAACTAACGAAC
ATTTACATTACACAATGCTCTATTAAAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026738120.1|1899159_1899771_-|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|271355
NZ_AP019822.1|WP_026738115.1|1892354_1892837_-|thermonuclease-family-protein	unknown	unknown	gnl|CDD|214615
NZ_AP019822.1|WP_006807751.1|1889477_1890353_-|hypothetical-protein	PD-DExK	mkCas0090_PD-DExK_CAS-I:CAS-III	unknown
NZ_AP019822.1|WP_026738119.1|1897088_1898921_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NZ_AP019822.1|WP_036056190.1|1879590_1880505_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	unknown	unknown	gnl|CDD|234626
NZ_AP019822.1|WP_026738118.1|1896044_1896917_-|aldose-1-epimerase-family-protein	unknown	unknown	gnl|CDD|185701
NZ_AP019822.1|WP_006808493.1|1899796_1900804_-|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl|CDD|273017
NZ_AP019822.1|WP_006807754.1|1886775_1887465_-|CRISPR-associated-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|377130
NZ_AP019822.1|WP_026738114.1|1885010_1885817_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026738116.1|1892944_1894081_-|PLP-dependent-transferase	unknown	unknown	gnl|CDD|223699
NZ_AP019822.1|WP_036056192.1|1882668_1883400_-|radical-SAM-protein	unknown	unknown	gnl|CDD|274938
NZ_AP019822.1|WP_006808472.1|1894108_1894537_-|hypothetical-protein	unknown	unknown	gnl|CDD|341213
NZ_AP019822.1|WP_036056499.1|1901053_1901686_-|beta-phosphoglucomutase	unknown	unknown	gnl|CDD|213672
NZ_AP019822.1|WP_006807738.1|1887485_1889468_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	gnl|CDD|274209
NZ_AP019822.1|WP_006807744.1|1885809_1886760_-|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	unknown
NZ_AP019822.1|WP_026738111.1|1881889_1882546_-|DNA-alkylation-repair-protein	unknown	unknown	gnl|CDD|132881
NZ_AP019822.1|WP_006808460.1|1903933_1904758_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_AP019822.1|WP_026738113.1|1883399_1884902_-|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl|CDD|274937
NZ_AP019822.1|WP_026738117.1|1894765_1895944_-|molecular-chaperone-DnaJ	unknown	unknown	gnl|CDD|236757
NZ_AP019822.1|WP_026738110.1|1880545_1881829_-|GTPase-ObgE	unknown	unknown	gnl|CDD|237046

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019822.1|WP_006807744.1|1885809_1886760_-|hypothetical-protein	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	2.2e-11	38.3	0.6
NZ_AP019822.1|WP_006807751.1|1889477_1890353_-|hypothetical-protein	PD-DExK	mkCas0090_PD-DExK_CAS-I:CAS-III	2.6e-31	102.6	1.9
NZ_AP019822.1|WP_006807754.1|1886775_1887465_-|CRISPR-associated-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	4.3e-14	47.5	2.5
NZ_AP019822.1|WP_006807738.1|1887485_1889468_-|hypothetical-protein	cas10	mkCas0133_cas10_CAS-III	5.3e-20	66.5	0.3

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_036056499.1|1901053_1901686_-|beta-phosphoglucomutase	gnl|CDD|213672	TIGR01990, bPGM, beta-phosphoglucomutase. This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	2.99146e-70
NZ_AP019822.1|WP_026738111.1|1881889_1882546_-|DNA-alkylation-repair-protein	gnl|CDD|132881	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this family, AlkC and AlkD from Bacillus cereus, are distant homologues and are composed of six variant HEAT (Huntington/Elongation/ A subunit/Target of rapamycin) repeats. HEAT motifs are ~45-amino acid sequences that form antiparallel alpha-helices, which are packed by a conserved hyrophobic interface and are tandemly repeated to form superhelical alpha-structures. AlkD and AlkC are specific for removal of 3-methyladenine (3mA) and 7-methylguanine (7mG) from the DNA by base excision repair. Homologues of AlkC and AlkD were also identified in other organisms.	3.22085e-103
NZ_AP019822.1|WP_026738115.1|1892354_1892837_-|thermonuclease-family-protein	gnl|CDD|214615	smart00318, SNc, Staphylococcal nuclease homologues.	1.34546e-28
NZ_AP019822.1|WP_026738119.1|1897088_1898921_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_AP019822.1|WP_036056190.1|1879590_1880505_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA	gnl|CDD|234626	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed.	1.12103e-128
NZ_AP019822.1|WP_026738118.1|1896044_1896917_-|aldose-1-epimerase-family-protein	gnl|CDD|185701	cd09024, Aldose_epim_lacX, Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	3.89306e-117
NZ_AP019822.1|WP_006808493.1|1899796_1900804_-|heat-inducible-transcription-repressor-HrcA	gnl|CDD|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	1.24188e-82
NZ_AP019822.1|WP_006807754.1|1886775_1887465_-|CRISPR-associated-protein-Csm3	gnl|CDD|377130	pfam03787, RAMPs, RAMP superfamily. The molecular function of these proteins is not yet known. However, they have been identified and called the RAMP (Repair Associated Mysterious Proteins) superfamily. The members of this family have no known function they are around 300 amino acids in length and have several conserved motifs.	1.22197e-06
NZ_AP019822.1|WP_026738120.1|1899159_1899771_-|nucleotide-exchange-factor-GrpE	gnl|CDD|271355	cd00446, GrpE, nucleotide exchange factor GrpE. GrpE is the adenine nucleotide exchange factor of DnaK (Hsp70)-type ATPases. In bacteria, the DnaK-DnaJ-GrpE (KJE) chaperone system functions at the fulcrum of protein homeostasis. GrpE participates actively in response to heat shock by preventing aggregation of stress-denatured proteins; unfolded proteins initially bind to DnaJ, the J-domain ATPase-activating protein (Hsp40 family), whereupon DnaK hydrolyzes its bound ATP, resulting in a stable complex. The GrpE dimer binds to the ATPase domain of Hsp70 catalyzing the dissociation of ADP, which enables rebinding of ATP, one step in the Hsp70 reaction cycle in protein folding. In eukaryotes, only the mitochondrial Hsp70, not the cytosolic form, is GrpE dependent. Over-expression of Hsp70 molecular chaperones is important in suppressing toxicity of aberrantly folded proteins that occur in Alzheimer's disease (AD), Parkinson's disease (PD), amyotrophic lateral sclerosis, as well as several polyQ-diseases such as Huntington's disease and ataxias.	1.91823e-47
NZ_AP019822.1|WP_036056192.1|1882668_1883400_-|radical-SAM-protein	gnl|CDD|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	6.77419e-104
NZ_AP019822.1|WP_006808472.1|1894108_1894537_-|hypothetical-protein	gnl|CDD|341213	cd17493, toxin_TenpN, type III toxin-antitoxin system toxin TenpN and similar proteins. TenpN-like toxin component of a type III toxin-antitoxin (TA) system, which consists of a ribonuclease (RNase) toxin that processes its structured and specific cognate RNA antitoxin, which in turn then directly inhibits the toxin. TA systems have been associated with many important phenotypes, like phage resistance, maintenance of genomic islands, and formation of bacterial persister cells.	2.66541e-31
NZ_AP019822.1|WP_026738116.1|1892944_1894081_-|PLP-dependent-transferase	gnl|CDD|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	9.03088e-173
NZ_AP019822.1|WP_006807738.1|1887485_1889468_-|hypothetical-protein	gnl|CDD|274209	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE. The family is designated Csm2, for CRISPR/Cas Subtype Mtube Protein 2. A typical example is TM1811 from Thermotoga maritima. CRISPR are Clustered Regularly Interspaced Short Palindromic Repeats. This protein family belongs to a conserved gene cluster regularly found near CRISPR repeats.	5.31628e-07
NZ_AP019822.1|WP_006808460.1|1903933_1904758_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.68524e-76
NZ_AP019822.1|WP_026738113.1|1883399_1884902_-|YjjI-family-glycine-radical-enzyme	gnl|CDD|274937	TIGR04040, glycyl_YjjI, glycine radical enzyme, YjjI family. Members of this family are homologs to enzymes known to undergo activation by a radical SAM protein to create an active site glycyl radical. This family appears to be activated by the YjjW radical SAM protein, usually encoded by an adjacent gene. [Unknown function, Enzymes of unknown specificity].	0
NZ_AP019822.1|WP_026738117.1|1894765_1895944_-|molecular-chaperone-DnaJ	gnl|CDD|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_AP019822.1|WP_026738110.1|1880545_1881829_-|GTPase-ObgE	gnl|CDD|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	0

Protein sequences

>NZ_AP019822.1|WP_006807751.1|1889477_1890353_-|hypothetical-protein
MIDDNKKNIENIIKNYVMYEKELINQLNFQIEHSTTIGGFREEIWKSFFERIVPKKFKVERSVFIMDSEGSFSNEVDLAIFDEQYTPYVFKYGQIKFIPIEAVAAVIECKSTNFKNDKIREWIDKIDNLSTSNDSIARIVSGVYNPMFDDRELAQTATAPIKIFCHTPKSKMRKERIEKLKDMDIIIEAIKSEKTEKQEMNIIFNNYSLENWYEKINHKKDEENERKILKFPENLKDKDLKKDYEIRNEQEKSIPLLSFIFQFNQLLMLLNNPMFFPHRSYVKLFNTYNEK
>NZ_AP019822.1|WP_006807738.1|1887485_1889468_-|hypothetical-protein
MNSKLIAISVEKIQKYIYQRIDDMTSQGLNDEKTLSSICSASKTIADDILEVVSKKFEINKEDYILEVSGKYIFKKDIEEDVLKRIEKEIFQEVYRKYDGQIFLKYTHFKAEKVDDDIEYIKKAIESLKCPKVKSKIIEENQDIIFNFLELGKIKEGNEEDKIESDSNEREEKIEYKHFVKSLDDLVSDKINTRGKIAVVKADLNNMGKIFEEIKSYNKYDRLSKILEETIKLKKFSEYLNQFNLENKILPFYIEGDDIFFAVQIGSLLNSIILLKVLIKELRERLEIEEIGKEINLTLSIGVTFVDNHQPVRYYRKSVEEELSKMKKIMKSEKKKDKAILGVSVAGVNLFYYDGNKGEGETDGFSKFKEDVERLEYLKISNSYFHNLLQSIEREKDEKAQIRVLLYRLLPENIIGRKGKNELALKYYLLSQVLEKEDKSKEKSPRKLKLEKIKSKLIPKLRLFMLLTDERYSEKKEIDKEKIQKYINEKIMLKIKSDLFNKPVSYLYDNEIEKRESTILKLFIKNSKITKEIKDKNGKTKIKNMWVYKKAPFQTSFFYRIKNIIETEKEKSKKLNKVKTVFENINNTIKNNENRERKDNKKLGNKENTNKIDYKLNFNFDKFKELIEEEIDKTDWLDVLILFYSYTQQKIKYLTVNKKK
>NZ_AP019822.1|WP_006807754.1|1886775_1887465_-|CRISPR-associated-protein-Csm3
MRKIKVKIETKSNCLIGNHTQSFSIGGVDQCTTVDNDGKPLIQASAFKGSTRFIVKSEGSDMEETKKFYKNYLEDLLKKYEKRKLENNLNSQNLEEIINKIKECINDLKPEYLFGIEGINTTPRLYFSDLKVVDGRKNTEEYFIIDSKTAILEDGDEVVSNPRTYKAIRPGVKFEGEIILRDFKNFVDIKKIAAELVEKLELFNDGYYRMGNSKSRGYGKISIETEIVE
>NZ_AP019822.1|WP_006807744.1|1885809_1886760_-|hypothetical-protein
MKKYLINLKVASDITSFPDSQKIFGWLIYQIKKYESEENITKLVNNIYEKKIKCMISNVLPKGFIPMPKEYVIDKFGDKSKEIYEKIKKIDFIKKEDMKKILNNEVELKNFKDYLRQKQSYIQKFRLENQFHNLAGLENKAYTVPIVKIINESTEEIVTDFIIMIKTDSDMIIKWLENIKNAQENEGNDEEVYLGPKGSQGYNRFIRGKVEIKEEKNSEKANFYLNVGMLLPNSINYKKSYIDLHISDRKAFEITEEAKKVIGFINVGSVIYSEGENFNIGKSIQNKYNILYKNAIVFGNSYLEALDSEKFGGENE
>NZ_AP019822.1|WP_026738114.1|1885010_1885817_-|hypothetical-protein
MNKYNLKFKSISKIVVSPRSLKILYKGVDFREDDLVKPYSNLEKEESNKITVIYPFYNYKDKLDEMIEKPEYYLPGSSIKGSIFPKEEDIRCDDIKLGKEDIVLDLLYKVIDYDEEKCQKSEKDLKIPKYKNFFENLGVEMINFGKEFETDIISVKKKNILEMLKKANEKTIDKLNRFTNKIEKVIFCLKKIKEKEAINELNKLEKILNEIKKIIKKYSKEKDKMITFIGGFKGKVGTIYQMKEDTKTGLYFDSKTYLPYGLVEIKIS
>NZ_AP019822.1|WP_026738113.1|1883399_1884902_-|YjjI-family-glycine-radical-enzyme
MSDQILSIIKNRVLTYEQKLRTLAGAAEDTLSVLNITPDIQEYRDKGIICDLFEGNAPYRARYITPDYEKFMKQGSKFLELEPAKDIWEATTNLLILYNHVPSITSYPVYLGNIDMLLEPYIKNEEEAYKAIKLFLLQIDRTITDSFCHANLGPEKTKAGEMILRATVELNTMTPNLTLKYDEDITPDDFAIQCVETSLKVAKPSFSNYKMFQKDFYGKDYAIASCYNGLSIGGGAYTLVRLNLAKLADEAKDEEDLLNNKLPDAVNKMARFMDERIRFLVEESGFFESSFLVKEELIYRNRFSGMFGMVGLAECVNKIIGAEKKEDKFGWSKYADDLGVKIIDKLQELVHNYKVKYCEITDDHYVLHAQVGIDTDHGISPGCRIPIGDEPVLPKHIKQTARFHPYFKSGIGDIFPFDEMASKNPASILDIIKGAFKEGMRYFSVYSTDADVIRITGYLVKKSEMEKLYKNEQVIQQTVVFGLGARENSKILERKVRGNE
>NZ_AP019822.1|WP_036056192.1|1882668_1883400_-|radical-SAM-protein
MKGIVNKIIPFSNVDGPGNRLSIFFQGCNFDCLYCHNPETIEVFGENKVPEEISVMGIDDILKEIEEVAPFISGITVSGGECSLQWKFLTELFKAVKKRWERMTCFVDSNGSIPLWTEDKKEFLSVTDKIMLDIKAFDEKDHILMVGVSNENVIKNFKFLVEIGKIYEVRTVIVPEIIDNEKTVDNISKLIAEYDKNLKYKLLRFRQNGVRRDVLVAYTPNDDYMNNLKNIATKNGLTDVIII
>NZ_AP019822.1|WP_026738111.1|1881889_1882546_-|DNA-alkylation-repair-protein
MNFDNLFEEMMKHKNEKEAEKMSAYMLNKFKYIGIKTPERRKIFKNFFKEYKKEEIINWDFINKCWENEYRELQYSAIDYLKEMVKFLTEKDIPKIKKLIITKSWWDTVDGIDVIVGETALKYPEINKTLIKWSKDKNIWLRRIAIDHQLLRKEKTNTELLSEIIENNLNGTEFFINKAIGWALRDYSKTNPDWVTDFIEKNKDKMSKLSIKEASKYI
>NZ_AP019822.1|WP_026738110.1|1880545_1881829_-|GTPase-ObgE
MFIDESVITVISGRGGDGAATFRREKFVQFGGPDGGDGGKGGDIVFLTDPNINTLVDFKSSKKFQAGDGERGAAARSTGKSGNDLIIKVPVGTMIRDFETNRLLLDLDRPNEKVIFLKGGDGGRGNIHFKSSVRKAPRIAESGREGAELKIKLELKLLADAALVGYPSVGKSSFINKVSAANSKVASYHFTTLKPKLGVVRIGDEESFVIADVPGLIEGAHEGIGLGDRFLKHIERCKLIIHIVDISGIDGRSPEEDFLKINRELENYSEKLAKKPQIVVANKIDMLYDDKKYDSFEKFVKDRGIEYVYPVSVIANEGIKPVLMKAWELIKEIPREELEEEYSVDELLCEMNKKDDWIINKLEDHVFEVDGRIVDDVLKKYVFTGDEGIINFLQVMRTLGMEVELENAGVEEGDMIIIAGYEFEYVI
>NZ_AP019822.1|WP_036056190.1|1879590_1880505_-|tRNA-(adenosine(37)-N6)-dimethylallyltransferase-MiaA
MNDLLKGIVISGPTGVGKTDISIILAKKIHSDIISADSTQIYREMDIGTAKVTTEEMDGIKHYMLDIINPDEDYSVGDFEKEANRILKEKEKNKENIIITGGTGLYIKALTEGFSDLPSKDEKLRKELEKKTVEELCEELEKIDIKAYNDIDRNNKVRIVRALEVCILTGKKFSEIRTENIKNNNYDFLKIFLTRNREEMYEGINKRVDIMINKGLPDEVKKVYDKYSKNRHKITAIGYKELFDYFDGAISLEKAVEEIKKESRRYAKRQMTWFRKEKGYITYNLSEKSQKETIEEILKKWEKI
>NZ_AP019822.1|WP_026738115.1|1892354_1892837_-|thermonuclease-family-protein
MKKILILIVMLFLSIPIFSENYRVLCISDGDTIAVKKAENGKITGKLIKIRLFGIDAPELKQDYGYESKQALMNFIKNKDVKIEGKKKDRYGRLIGVVYLNNENINEKMVKTGNAWWYEQYDRKNLKMKQYQESAQKSRIGLFAKKDYVTPWEFRKRKKR
>NZ_AP019822.1|WP_026738116.1|1892944_1894081_-|PLP-dependent-transferase
MKFETKAIHGIRKDDGKHSGWKSTINMASTAQIENFGEEQEFEYARVSNPTRSELEKIMAKLENGKHAFAFSSGMAAITSLFTKFKAGDHIVLGTDIYGGTYRIMTDIFGKYNLEYTFVDTTDLQNIEKAVKDNTVAIFIETPSNPLLDVTDIKGVVEIAKKYELLTIADNTFMTPYLQRPLDLGIDIVVHSATKFLSGHHDILAGMVIVNSDELAEEVWFAQKAIGAILSPFDSWLLMRSLKTLKVRIEAAQKNTLKLIEFFKNHKAVEKVYFPTEENNKGKKIHESQAAGGGAVFSFVLKDENKVKPFFDNLKVALSAASLGGVETLVTHPHTITHAEMPEDEKNARGITKSLIRVAVGIEHIDDLIEDFKNALEK
>NZ_AP019822.1|WP_006808472.1|1894108_1894537_-|hypothetical-protein
MEFKFLTENFYEKYENYKEVEKKKNRPYTVVYIIEYNNLLFAIPLRHNINHRYKISTVDNKGLDLSKVLVITDRKYIDNKKVFINDEEYKLLKNKERKIVSELQKYIKLYKKALKKPEIKRNKSLIEKSCLQYFHKELGIEK
>NZ_AP019822.1|WP_026738117.1|1894765_1895944_-|molecular-chaperone-DnaJ
MAKKDYYEILGVPKNATDQEIKKAYRTMAKKYHPDMNKDNKEAEAKFKEVQEANEVLSDPQKRAAYDQYGHAAFENGGQGGFGQGGFGGFGGFSSEGFGNFGGFEDINLGDIFGDFFGGGSSRRSQGPRVKEGADLRYNMTLTLEEVAFGVEKEIKYKRKGKCKTCNGSGAEPGHDMKTCDKCNGSGQIRMQQRSIFGVQTVIHECDKCHGTGKIPEKECHTCHGTGVEKETVERKVRIPSGVEKGQRLVVRDGGDAGENNGLFGDLYIFIDVKEHPIFKRKGYDIYCKVPISMTTAILGGEVEVPTLEGKRTIKISEGTQSGKELKLRDKGIRTSNGTGSEIIEIKIETPINLTEKQKRILKEFEDSLNKKNYKESNSFLDKMKKFFKGEE
>NZ_AP019822.1|WP_026738118.1|1896044_1896917_-|aldose-1-epimerase-family-protein
MENTLKYGNVEIEVLSTGAELSSYKVNGNEFIWERNPEFWPNSSPVLFPFVGVLKDGKYIFKNKEYSMTTRHGIARYEDFDLVEKGENFLKFKFSSDEETLKKYPFEFDFFMTYTIIDNSLEIKYEVINKSNEDMYFSLGAHPAFALEINENIKLEDYFLEFEKEETAQIYQLRTDALILNERKDYLKNEKIIKLDKNIFDNDAIIFKDLNSTKVALKCNKNERKLTMDYGKFPFIAFWSKPASPFVCIEPWFGISDFANCSGKLEEKTGILKLDKNKSFTAKLLLTGSL
>NZ_AP019822.1|WP_026738119.1|1897088_1898921_-|molecular-chaperone-DnaK
MSKIIGIDLGTTNSCVAVMEGGSFAIIPNSDGGRTTPSVVNIKENGEIIVGEIAKRQVITNPDSTVISIKTNMGSDYKVDINGKSYTPQEISAMILKKLKKDAEAYLGEEVKEAVITVPAYFTDAQRQATKDAGEIAGLTVKRIINEPTAAALSYGLDKKKEEKVLVFDLGGGTFDVSILEIGDGVVEVISTSGNNHLGGDNFDQKIIDWLADEFKKETGIDLRNDKMAIQRLKDAAEDAKKKLSTTLETSISLPFITMDATGPKHLEKKLTRAAFDELTKDLVEATKGPVKQALDDANLSPNEINEILLVGGSTRIPAVQEWVKSYFGKEPNKGINPDEVVAAGAAIQGGILMGDVKDVLLLDVTPLSLGIETLGGVFTKIIERNTTVPVKKSQVFSTAADNQPAVSIVVLQGERAKAADNHRLGEFNLEGIPAAPRGIPQIEVTFDIDANGIVHVSAKDLGTGKENQVTISGSSNLSKDDIEKMKKDAEAHEAEDAKFKELVEARNQADQLVLATEKTISENADKLQETEKEDIEKAIEELKKVKDGDDLEAIRKGVEELSKVSQGFATRMYQEAAQKAQAEQAANGNASGNTSSDSNDDVQDAEVVD
>NZ_AP019822.1|WP_026738120.1|1899159_1899771_-|nucleotide-exchange-factor-GrpE
MSEKDYEKEIADESTENFQEENEKETNENVNNSDEEKAPENGDSDKKEEADSPEMKIKKLELELQEWKNSYTRKLAEFQNFTKRKEAEVSEMKKYASENIIVKLLDNIDNLERAMDASKESKNFGSLVEGVNMILNNLKYLLKEEGVEEIETENKKFDPYEHQAMMTEQKEELENDDIVQVFQKGYKLKGKVIRPAMVTVNKK
>NZ_AP019822.1|WP_006808493.1|1899796_1900804_-|heat-inducible-transcription-repressor-HrcA
MNDRERLILKAIIKHYLEFGESVGSRTLEKKYEIGVSSATIRNTMADLEDKGLIVKTHTSSGRIPTSEGYRIYVEELIKIRDISTEAKAKVIEAYNKKMSQIDKIFEETSRLLSKISQYAGVVLEPAIRQENVKKVKLIHINDTGILAVAVMDSFLTKSFNIFLENPMSEEEVEKINIQLNEKIKNSPEAFTLSDLGEFFMNMDLLMPEELKEEQDENETKLFFEGGTNLLESNVSDVMKVIDRVKLFNNPNDMKQIFSQFIQTDQYKDGEVNVIFGEDLDIAGLEDFSFVFSVYTMGNARGIMGVIGPKRMEYSKTVGLVEYVSEEVKQLLNKK
>NZ_AP019822.1|WP_036056499.1|1901053_1901686_-|beta-phosphoglucomutase
MFKGYIFDLDGVVCHTDKFHYSAWKKISDDLGIKFSENINNLLRGVSRKESLEIILSFSDKKISDAEKEKIIKSKNDLYVKSLEKINKDFLDDGVEEVLRNLKEKNKKVALASSSKNAKLILNKLEIISYFTIIIDGNNITYSKPNPEIFEKAVSSLGLDKSDCLVIEDADSGIKAAKIAGIKVCGLGNNFTEEVNYKLNHIKELFKLID
>NZ_AP019822.1|WP_006808460.1|1903933_1904758_-|carbohydrate-ABC-transporter-permease
MRLSLKTKFVIYFLCVVFSIYFLFPFIWMILSALKTDVEVFSYPPKFFPEKFNFKNFYDAWHSQKFSVFLVNSLIITAFTTLGQVISGSLAAYGFARYKFKGDKILFSLMLATMMLPWDVTVIPQYMQFNILGWIDTLKPLIIPALFGSAYYIYLLRQFLETLPSDFAEAAKIDGANEFQIYRMIYLPLMKPSIILVAVLNIIVVWNDYLGPLVFTNSSDKYTLALGLAAFKGVHSDAIIYTMCISIIMCIPPIIIFFMAQKNIIEGISGGVKG

Crispr_ID: NZ_AP019822_6

• CRISPR_ID: NZ_AP019822_6
• CRISPR_location: 2145585-2145683
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019822_6

Consensus_repeat	Method
AATTCGTGAGGACTCGCCGTCCT	CRISPRCasFinder

spacers of NZ_AP019822_6

>6.1|2145608|53|NZ_AP019822|CRISPRCasFinder
TATACTTTTGCTGATAATCCTGAATTTTGTATACTTAAAAATGTCCGTTCACA

CRISPR arrays and Neighbor proteins around NZ_AP019822_6

CRISPR arrays

The CRISPR arrays of NZ_AP019822_6

>merge|NZ_AP019822|6|2145585-2145683|CRISPRCasFinder
AATTCGTGAGGACTCGCCGTCCTTATACTTTTGCTGATAATCCTGAATTTTGTATACTTAAAAATGTCCGTTCACAAAGTCGTGAGGACTCGCCGTCCT

>NZ_AP019822|6|6|2145585-2145683|CRISPRCasFinder
AATTCGTGAGGACTCGCCGTCCT	TATACTTTTGCTGATAATCCTGAATTTTGTATACTTAAAAATGTCCGTTCACA
AAGTCGTGAGGACTCGCCGTCCT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026738260.1|2129406_2137155_-|hemagglutinin-repeat-containing-protein	unknown	unknown	gnl|CDD|368641
NZ_AP019822.1|WP_026738267.1|2145914_2147450_-|glycerol-kinase-GlpK	unknown	unknown	gnl|CDD|234594
NZ_AP019822.1|WP_026738273.1|2155271_2156564_-|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl|CDD|234607
NZ_AP019822.1|WP_006807197.1|2150532_2151597_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NZ_AP019822.1|WP_026738270.1|2152527_2153145_-|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NZ_AP019822.1|WP_026738271.1|2153264_2154338_-|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl|CDD|376752
NZ_AP019822.1|WP_026738274.1|2156904_2158446_-|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl|CDD|381169
NZ_AP019822.1|WP_026738261.1|2137516_2139301_-|hypothetical-protein	unknown	unknown	gnl|CDD|225387
NZ_AP019822.1|WP_006807223.1|2148797_2150513_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|224099
NZ_AP019822.1|WP_026738258.1|2125472_2128601_-|hypothetical-protein	unknown	unknown	gnl|CDD|369610
NZ_AP019822.1|WP_026738262.1|2139505_2140096_-|YigZ-family-protein	unknown	unknown	gnl|CDD|224653
NZ_AP019822.1|WP_026738264.1|2141139_2141907_-|site-2-protease-family-protein	unknown	unknown	gnl|CDD|100079
NZ_AP019822.1|WP_026738272.1|2154359_2155232_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187554
NZ_AP019822.1|WP_026738266.1|2143959_2144826_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026738269.1|2151711_2152488_-|precorrin-6A-reductase	unknown	unknown	gnl|CDD|376826
NZ_AP019822.1|WP_026738268.1|2147673_2148705_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270262
NZ_AP019822.1|WP_026738265.1|2142056_2143976_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_026738263.1|2140107_2141103_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_006807198.1|2144822_2145569_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019822.1|WP_036056222.1|2124566_2125457_-|hypothetical-protein	unknown	unknown	gnl|CDD|373949

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_026738260.1|2129406_2137155_-|hemagglutinin-repeat-containing-protein	gnl|CDD|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	7.30342e-22
NZ_AP019822.1|WP_026738267.1|2145914_2147450_-|glycerol-kinase-GlpK	gnl|CDD|234594	PRK00047, glpK, glycerol kinase GlpK.	0
NZ_AP019822.1|WP_026738273.1|2155271_2156564_-|glutamate-1-semialdehyde-2,1-aminomutase	gnl|CDD|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_AP019822.1|WP_026738270.1|2152527_2153145_-|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.53547e-53
NZ_AP019822.1|WP_026738271.1|2153264_2154338_-|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl|CDD|376752	pfam02277, DBI_PRT, Phosphoribosyltransferase. This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.	2.97309e-147
NZ_AP019822.1|WP_026738274.1|2156904_2158446_-|uroporphyrinogen-III-C-methyltransferase	gnl|CDD|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	2.20998e-115
NZ_AP019822.1|WP_026738261.1|2137516_2139301_-|hypothetical-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.96456e-91
NZ_AP019822.1|WP_006807223.1|2148797_2150513_+|iron-ABC-transporter-permease	gnl|CDD|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	2.40044e-101
NZ_AP019822.1|WP_026738258.1|2125472_2128601_-|hypothetical-protein	gnl|CDD|369610	pfam07946, DUF1682, Protein of unknown function (DUF1682). The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found.	0.000180464
NZ_AP019822.1|WP_026738262.1|2139505_2140096_-|YigZ-family-protein	gnl|CDD|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	6.22773e-50
NZ_AP019822.1|WP_026738264.1|2141139_2141907_-|site-2-protease-family-protein	gnl|CDD|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	8.78477e-56
NZ_AP019822.1|WP_026738272.1|2154359_2155232_-|SDR-family-oxidoreductase	gnl|CDD|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.15493e-57
NZ_AP019822.1|WP_036056222.1|2124566_2125457_-|hypothetical-protein	gnl|CDD|373949	pfam15575, Imm49, Immunity protein 49. A predicted immunity protein with an all alpha-helical fold and a conserved proline residue. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, usually containing a domain of the Tox-REAse-1 or Tox-REase-6 families.	4.14272e-05
NZ_AP019822.1|WP_026738269.1|2151711_2152488_-|precorrin-6A-reductase	gnl|CDD|376826	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyzes the reaction: precorrin-6Y + NADP(+) <=> precorrin-6X + NADPH. CbiJ and CobK both catalyze the reduction of macocycle in the colbalmin biosynthesis pathway.	5.61731e-93
NZ_AP019822.1|WP_026738268.1|2147673_2148705_+|ABC-transporter-substrate-binding-protein	gnl|CDD|270262	cd13544, PBP2_Fbp_like_1, Substrate binding domain of a putative ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The substrate domain of this group shows a high homology to the periplasmic component of ferric iron transporter (Fbp), but its biochemical characterization has not been performed. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.11368e-147
NZ_AP019822.1|WP_006807197.1|2150532_2151597_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.57873e-157

Protein sequences

>NZ_AP019822.1|WP_006807198.1|2144822_2145569_+|hypothetical-protein
MKLQFLKEIPLETLRKNIENNFSNYALPTNEWIFSFFGDVSPFLDFKKEVPDFELNMSYEKPEKSDIENIKILYSSLKDLSVVEATSESLWVGMAHSTFWNYMQYRLYLDRNKSYINNIKNSFFFSKGRKRSLIEHTLSRLWWAGKMAYDENREDPFELLEVFNTDFRTKLLYLFSSNFTNNPTITRAFLSSVLDFEKNGVKIKREIFNETIMYLNILGGTYILDYFEESELKDKITKKIDDLLLASD
>NZ_AP019822.1|WP_026738266.1|2143959_2144826_+|hypothetical-protein
MNIEYKLYPYPVLNYFSDDYINSVFTSNLKLDKLGNGIIFELTANTDDEGLKELIGKGLAEYVFHIECSSTSYRNIVKSATGTETVTIPESKLNNRVNVCFFIVAKKEIENYSNVNFNPDYEGISFTIEKANILAIAKQYNVEIEKEKDNLAQVPSIFLIIKRESDRKDGIEIEMLQDKLQISLSKKDYEHYALLSKGNYQALLHSSIIFPALIYVFENLKKSDLEIYEDFNWFKTIKKVLNNIDIELDKESLERELSYNLAQKIINFPVSRSLQVMTSLETEEEEIE
>NZ_AP019822.1|WP_026738265.1|2142056_2143976_+|hypothetical-protein
MSINWNFPESNYSQRMGISEAGIETFRGSLFGSLAKEICQNSLDAQLNFSEPVTVEFSKFNIKTDSIPGYSELNEALKKCLHSDSDEKAKKFFENACKKMENPKISILRASDFNTTGLRGSRESNMSINPWQSLVKSSGISDKSSVSGGSYGIGKSAPFACSDIRTVFYSTFDTENVLATQGVSRLISFPISEDRFTQGIGYYGETEKNTPVFKDLNLDNSFKRKGRRGTDLYILGFREDSKWKEELIFAVLENFLISIYNRNLIVKVDETVISRETLKETIDNLKISEKKKNHFIVDYYRVLLSTSGNNVVDNSFLLGDNFKDLDDFELRILYDDLNRKVLISRSNGMKIFDLDRFPSSLQFSAVFTLKGEKLNGYFREMESPQHDSWEPDRHSDKNAKNMLKELKLFIRNKIVELGKNAVEDQMDADGIGDFLPDDLIFLEKKKEEDKIDKVSDKTKKMDLKSIDSVPRKRNAKTTPKSREEFNESSETGNFTEGTPDAGDAPFGIDEVEENNLEKEFSIIKDENGFLKVKKISLVSDADIRLILLNKKLRKYKLVITPKKNIPDACVRISLSGEQSNLRARIRNAYENDNVASPLRIKQDKIYMNNLYENQKFSLSFILNYSDDCSMEVELYEYRV
>NZ_AP019822.1|WP_026738264.1|2141139_2141907_-|site-2-protease-family-protein
MNNIKRYYNKFKMMNPKNTELKLAVIITVLGFMLFRGISDFNFSWDIVISLCVFVISMTLHEVAHGYVAYRFGDDTAKRAGRLTLNPLKHLDLFGMLLPILLILSGFPFVIGWAKPVPVNFYRLKPNRLGLFCVAIAGIVVNLIIAGISLIALRTLAHSVDFFMSDTLLTVFLYMYIINLALAFFNLIPITPLDGGRIVYSMAGEKVRSFYNQIEKYGIIIVFIIVYSGVFRGIFMELLDFFINLTNLGIPVDVI
>NZ_AP019822.1|WP_026738263.1|2140107_2141103_-|hypothetical-protein
MKKILLILTMLFGISFGANAFTRKEYIQENLSKLGIKQEIINETIKLDKEIGDTTLNESSEGGTTEKKRTQQLKKAKELFKKDKNNYIILEKILGIAKSKERNEEIKEYENLYLKAKIPEDAKNFFLGEYFFLSGQRDKMNEYFKKVKDSSKNVFYLKMTEFYKMLEMKEEAENNNKDTEKENKRIKEFISTGIIKTGELNKILNNSSLMKESGISDEEVYSRQLDVEILRVFFYVFNDELEKGIDDYIQNIANKKVSKDVLEYNKEKDVFTMMMTIMTPVFKIMFGALTDTKNKDEINEKSIEKIMKKFIKTEKYRQFEKEGLMDEINLK
>NZ_AP019822.1|WP_026738262.1|2139505_2140096_-|YigZ-family-protein
MKTVSKETIIEFEEKKSKFIGYIKPVSSVNEAEKFIKSVRKKHPEATHNVPLYRVMENGQEYFKYNDDGEPTNTAGKPMAEILNILDIYNVAIVATRYFGGIKLGAGGLIRNYAKTAKLAINEAEITEYVEKSEFILDYDYESTSEVDSFLNINGEKYNIEISERNYSDRVTLKIKANSDIEEKLNEMSRVIVIRL
>NZ_AP019822.1|WP_026738261.1|2137516_2139301_-|hypothetical-protein
MKKIKNLSFFLLLCSAVVNAAPKDEANRLLDKEQQRLEQERQLNEQENRRKEIEGSKFTPDIEVKSVEEENVTTFLLKDLQIIDKDKLLSEGDKFQLSKKYKYKEIGVKELNILLNEANAILVKKGYVTSRINVNTDNIQQGEITFEVITGRIDKIKLNNNSFADKLKIFFNKPKTKGNVLNIRDIDTMTDNFNKNASNNFAVNIEPSDKEGFSNIIAKNEIKGKTTVSVGYNNYGDEQGGKNRLKIGLDIESPLGVNDLLSMNIQGVKRKKVDRSWKIPESQLLPGQIAPSGPVPGYDPKIHGLLPPQRQTLLWNITYRIPFRSYSLVLSGNKSVYRRSTYAYNTIYDLSGSSTSLMANLSKILYRDNKSKLTGNIEIKRKNSKSYFEDVELTNRNLTIGTLGVNYDFALFKGVSGLSVSYSKGMRIFHGEKDIEKGETAPKAEATRYNASFYWYKPIKNAAFRLTAEMQKSKDVNYGSEKVSIGGIGSVPGYQYDNISGDSGYSVLAELSYTFRYEKQRLIPYISYGIGETKNNHDESEYRLGKVKGGSIGIRFSSTYFDIDVSYAKAFSQSEYVKPKNHEVYASMTVKYSF
>NZ_AP019822.1|WP_026738260.1|2129406_2137155_-|hemagglutinin-repeat-containing-protein
MKEIRKELNRVIAALLLSLFMSFNIFGAGIEVDPNVPQNVNVDRAPNGVPVINISTPTDKGTSVNSFKEFNVDQRGVEILNNTGVGRGHLSGIVNPNPNLRPGQEARTVVFKVTGANRSEIEGYISALSPRPINLFIANENGIYVNGGGFINVNRAALVTGKINIQDGDVVSFTTRDGKVIIGEKGLDISNVERVDIITRTQELAGKIVGQKDVNIILGQNEVNLAGIVTPIITADNKPALSLNGGALGSIYSNGQVNIISTEKGIGVNLKSSVLSENDIRMKINGNADIKEIISKNAEIQTEDLKTDKINANNLNITAKDYENRKEITAQNVNISSSNFKNSELTAGNLTLNTGNTESNKISANSVNITGNNLKTNVMEGQNISLAISNNINNIGNILANNLDINSKSLNSNGITADNLKINSETISSNKIEAGNTEIKGINLTTDKLKSRNINLDISRNIINTGNITGSKVNVNTGDIKNNEIISDELNLNATKNIDSNIIYSNTAKIKAENLDSNSIEGQNISLAISNNINNKGNILAENLNISSKDISSNEIKANKIIIDSKNVTSKKLTSNEAKIKVESFVNNEKTDSKSADFDIQKNFENKGTLAVDNLTLKADNVNNDGKISTDKAKININKNIINNNEIASNDLTLKTENLINNNKMTVVKADVTAIKDVTNNGLIIGNDIAVSSQNIINKNKIEADKLITEATGITENKGEISANEYTSTTTDFVNENIISVGKGIINATNTIRNDNKINANELTATSKTFVNNKKVETGKGNITATENIENNDLIAANDLTLKGKNIINAKGKTIFTTNELTANASESIVNNGAEILSQGKINLTAATVDNKVGKIKGSRLVDITANVVNNIGKAGDLTKYKKYWEAWDGTIYTDETKMMQRNQPGSWERNYYADPSNEGDKWQVFHNWLTGLKKPEEPSYIAKNMEDIVKNRMRANEDGIMLNSAEFPIIPLVNKIESEAQTEFAVISGGDVKITSTGEVNNIDGIISSDGLTKVDAPKIVNRVTIDTNNPVQLRDGMENLKWWYHKSKHSKKSTYYVGYYRFLSPTIRTAYVAGQPSVIEGKILSVDTSKIVGESYEEAKGKLSTNPTYSKNVDKQNIEIVKNISGITEVKNTGIIPINISGINTGNTGISQRNGINIGSLYVPSTDPSSRYVIENRTEFITRGNYYGGDYFLSRMGYVEDWDRVKLLGDAYYDNMLIEQTLMEKLGTRYINGLSGEKLTKQLIDNATTAKKDLQLRQGVALTKDQINNLKNDIIWYEYETLNGKKTLVPKIYLSKATIEKLEVDGRSKMYGTDYTLVNIKGDYENKGLKIGSTTGVTLVKANKVRNETVANERAEITGRQVRVTALEGNIENIGGKIVSVERTELIAKNGDIINNGTKVTKGYDLGENFRSKYEELGNIGEISGSAVYLEANNYNSTGGALATKNLELQLTGNINENALELNGDDRFGRNSSNYQTYKSKEHIGSGIVAEKATGKVGDINLKGSAFVVEDGKGLKVGNVKAESAVNEYDVEKRTGQKGLGYRESSFTQSHTEENAASNFKIGENANISGTVTGIGSNIYIGDNSFVGGKVTTDSRELHNTYYNEEKKSGFSASAKGTSVSAGYGKSKNTYDEKSTINAKSSLHVGHNTTLNNGAEITATDFEHGKIEINNGDVTYGARKDTRDVSTTSKSSYIGVTASVKSPALDRVKQAKEAVDQIKKGDTVGGAVNAVNFMTGTVHGLAGNQGNRQRNYDKNGSVGKQGVKDASANNNFYANIGLDVGFNTSKSETNSHEESAVVTTIKGINEESSITYNNVKNINYIGTQAKDTKFIYNDVENINKEAVELHNSYSSNSKGFGISAGATVGYGHKIQTTGNGGSVSVTRSNMNTEETLYQNGRFTNVEEVHNGTKNMRLSGFNQEGGKVTGTIENLVEESKQNISKTTGSSSGVTLGIGSNGVPSSASISGSRTNGSRAYVDNQTTFILGEGSNLTIGKVENTAGIIGVEGNGKLKINEYKGKDLHNHDNLTTTGGSIGVDFGKGGAKVNGIGVNNESHRKGGITRHTVIGNVEIGSATGSPINRDRSKANETTRDDHSSTNVYIEGQTIDYATNPSKLKEDIGKAKDEIGDIGRAIKESLNDRGDDNRNFLGQLSETRIQRTIENIAGERLKVSTTQEDISKTLKDTYKDLGYDINIVFTTPDKAPQLIDEKGKIKAGTAYVGEDGKHTIIINTEAKENQDRAGLIGTITEEGSHVIGKVEGRQRKVPEGSEEKGLESTGRATNDFFNKTYQEGNIQIQTKSDGKDYSKADFGEHVGDKEYKLLGKMSAEEIIRNSREYILESKKQGLIHSAEALEHFLNNKGTSLKIDEEWYRGYDDVKKAEQRNINRFFSIESGKSEGGEWFSGFKGTPLVALDKINKDYGGFDKMKIGESIEFNDYWKTSVKISEKEDIKKAADFFFTFGATILKTEAKVKVKKIDQENVSIEISNVKYSIEDMYDWHPGKIRMLNKNVKFDEKLIEEKTGLKNVSINFEDSAMKKLVNEKKAKEFKFELEYKGRDRSNNINMKKILKKYMKIGGAWREKWF
>NZ_AP019822.1|WP_026738258.1|2125472_2128601_-|hypothetical-protein
MGEGSNLTIGKAENTAGIIGVEGNGKLKINEYKGKDLYNHDSLTTTGGSIGTSGAGISNENHRKEGITRHTVIGNVEIGSATGSPINRDRSKANKTTRDDHSSTNVYVESQTIDYALHPAKFKEDVGIAVLEGSATVEGALKKIDNILRGDDNSDISQSEKRRYEEIKENIIRVKTAPDMKLIAEGDLSDPEVQKRLGIGGRFNPDDPNLPEKIKDRIAQVREQGQEINYFYDKVTGKIYINENADEDEIRAGIGREWGIRNEFDRGRTKPNGEGQEKGTVAGEIAYKEIEDRTKGKGDKKVNPYDFEYAQFDPDSEVSGDFTKAHIDKFFAGLGEAGARLRKGDIKGGLGKVAETFGKTGKVLGKDTKNVIAGGDKRKKTIEESKNAIKEKATEVKARNEKKRKAAEAEKAKKRQEEERKKQEEKNKEIAEISKKYIGRRIVSKEDYDYLIYLSKNPDLRSEYKDYNIKLINTLEGKYLIEESLGNPKAKASKEWFEEKYLANNEQYYYYTTPQPTISDFRRDINAGRGISSGGLFIKGYGLTKEYAEMNKEEKVGMVIEGTAQGAGGVIRAGAGASAVGIGLGTCVETAGGGCLAAGAGAANVSFGGNEAFMGGQKILQGFTNQGYTIKGTPGEEYAKLKAGKEANVNRSFKGIINPIKSTMTTIGFGEDDYDVLNMMTGQGMQYASQYVQTYRPMYEAKRAVILGNGNSNVRAKNEVSHTKNESSSTKGKPQDIVLVENSEGVLEVPKETKIQNNTNIKPISSNSGKKPMRDVTNSVKEDKSGGITYTIKVIPKENPKVNPEIIEKSTIEATKIQTEEIVLKKPVKNDYKENNSFESNYSNNKEKSFNYKSSGGNENLKNTEYSSGLGDLKYTETPLTSNKIGSKNVNKHSQTLNTPSEVSKDVKTVMRGEDSSGRITEKVFNTAFEKDPNITVYEGKYGSNNGFDHVIKDEKTGEVWILESKQLSNKGTVNLSNKGVGGTRQLSSEWVDNVLMKLDKDSPTRKLIEQARKYDKLRTGVTVIDKDTGELKIVPVIIKNK
>NZ_AP019822.1|WP_036056222.1|2124566_2125457_-|hypothetical-protein
MNVVAGKTKYERGLRHILVSGIDKKSEKESLEYIQNRVGDQLWCMYSLSIDYEEMSSKNLLIEKDIKTHRLNSYISAKLRLLGQKVRERFVRGVGDLFVLMESNNRDFIEFLMNNLEVITPNDYDEMKRVYKNMMINSKISLFILRNVLLAIKGDMEEVGKRSEAYLKECKESKHYVYFYTGQLFLKALSEGNKEKMKEAIELMMEPRLAKKLMYDLNPNYDFYLHMFVIIYAKIAMYHRYDLEIDYEVAPKELIDNTPLERYEDPYEFMKAFSLATITQEEWRKWTFSWPFRPVE
>NZ_AP019822.1|WP_026738267.1|2145914_2147450_-|glycerol-kinase-GlpK
MDNKNIYGSKKYIIALDQGTTSSRAVIFNKNTDIISSAQREYTQIYPQPGWVEHNPMEIWATQRSVLTEVIAASGISLKDVAAIGITNQRETTIVWDKNTGEPVYNAIVWQCRRTADICEKLKEKGLEEYIKENTGLIIDAYFSGTKLKWILDNVEGAREKAEKGELLFGTVDTWLVWKLTAGKVHVTDYTNASRTMLFNIKELKWDKKILKELNIPESMLPEVKNSSEIYGYTKMGLTMGEESGTNIPIAGIAGDQQAALFGQTCFNKGDIKNTYGTGCFMLMNTGENCIKSNNGLLTTIAVGINGKVEYALEGSVFIAGAVIQWLRDEMKFFSDAADTEYFATKIEDNGGVYLVPAFVGLASPYWDMYARGTIVGLTRGSNRNHIIRAALESIAYQSKDLIDAMKEDSRLDLTSLKVDGGAVANNFLMQFQSDILNIEVLRPEIIEITALGAAYLAGLATGFWKDKEEIIKKQKLNRKFMPNLSEELRSKYFKGWKKAVEKAKNWEDAE
>NZ_AP019822.1|WP_026738268.1|2147673_2148705_+|ABC-transporter-substrate-binding-protein
MKKIFLAILLIILTLSCGASDDSDKKEGKGKLLFYAGLQEDHAALIAQEFEKETGIKTEFVRLSSGETLARLKAEKDNMTASVWYGGPVDGMIAAIDEGLIESYISPEAANIKPEYKDSKGYWTGIYVGYLGFVGNKKMLEEKKIPMPSSWADLLKPEYKGEIVVAHPGSSGTAYTMLATLVQLMGEEKAMEYFKKFNGQVRQYTKSGTAPGRMVGTGEATIGITFLHDGIKYQKEGYSDIILATPSEGTGFEIGGVALLKNGPDQENAKKFIDWVLSKKVQELGKTVGSFQFLTNKDAINPEEAKVVEGAKLIKYNFDWAGKNKKRLVDRFTKDTNTTLPKE
>NZ_AP019822.1|WP_006807223.1|2148797_2150513_+|iron-ABC-transporter-permease
MNNDFKLKLNHELKNIRKLINDPVLLLTIIFSLAVVTFFVLVPLWNILLESLKIGKGKIGLENYIESFTASGNFQVILNTILLGFVTSIISLIIGFFFAYVSVYIKIKGKKIFDFIAMLPIISPPFVIALSAIMLFGRQGIITSRMLGMKGFEIYGFHGLVLVQVLSFFPIAYMMLVGLLQMIDPSVEEASRSLGASRLKVFTTITFPLMLPGLANAFLLVFIQSIADYANPFVIGGKFTTIAVKIFQEGVGNYELGIATALSIILLSLSITMFTIQRYYINKKSYVTVTGKVSRERELIDSKKIVTPIFTVLILLTSFVIIMYILIPLSSFVEIFGIKNNFTLRHYQEIFRFKNRIAPIIATTNLSLWATLIASVFSMIIAFLIVRKNFIGKTFIEFTTIMALAIPGTIIGIGYAISYNKVYKIPFTNITLIPTLTGTAFIIVMAFIIRSLPVGVRSGMSALNQIDPSIEEASTILGASSRQTFFKVTIPMIREAFLSGLIYSFARSMTLVSTVVFLISAKWKLLTPEIMNHIDQGRIGIASAYCTILIIIVSTFMIIVKILMSFTNAKK
>NZ_AP019822.1|WP_006807197.1|2150532_2151597_+|ABC-transporter-ATP-binding-protein
MSESKSLIIKNLTKTFITKTRRVEAVKNVNLSINSGEFICLLGPSGCGKTTVLRMIAGFEIPTSGSIEIGGKDIAYLTPDKRGISMVFQNYALFPHMNVYDNIAYGLKLQKKGKQEIDERVKKILQLMKMEDFAERVPSQMSGGQQQRVSLARALIMNSSVLLFDEPLSNLDAKLRLHMRDEIRKLQQEVGITSIYVTHDQAEAMALSDKIILMRDGEIIQVGSPTEIYQKPNSEFVAKFIGRANILNAEILEKHSNFTKIKLLNSEYNVPETTTHNVGDNIKIVVRPESMDFSKNSNTLKVVKSVFMGENHEYEVQSENEIIEIILSNPHGKEIKKVGEMLTFGIDEEAIHIL
>NZ_AP019822.1|WP_026738269.1|2151711_2152488_-|precorrin-6A-reductase
MIWIIGGTKDSRDILERLIKETDKDIIVSTATGYGGKLLEEYTENNGNGKREIKVISERLNEEQMKALIKENNITEIVDASHPYAINVSNSVIKVKNETGIKYIRFERKMLDYGNDKVEKFDSLEEVNNYVKGLSGKNILSTLGSNNLGDIKEMGENNNLYVRILPTTDSIKKAEDLGYLPSRIIAVQGPIDKVLNKAMLESYKIDYLITKESGATGGEQEKVEACRENGTTVLVVKRPFVDYGTVYNEIDDLMKEFR
>NZ_AP019822.1|WP_026738270.1|2152527_2153145_-|histidine-phosphatase-family-protein
MDNSGNVLKLYIVRHGETKWNVEKRFQGQTDSDLTEKGKEKVGKTGEELKNILFDAVYTSELGRAVKSAEIILSKNINKKNRLQKLTELNEVYFGKWQGLSYNEIFEKYPEEANNYFYDIKKYYAKNIEAEELKDALDRFLKGMDKIVKNHKSGNILVVTHGTVLEMFINHVINKDTKDIDERKLIGNGKYRIFTYKNGEFLTAD
>NZ_AP019822.1|WP_026738271.1|2153264_2154338_-|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MGYSEILNETLEKIVPLNKERMENKQKELNSLLKTPDGLGKLEKLAVQLERIKENYSPEKKVVTVMAADNGVERENVSKSKRVITQYVVEAMLQGKSSINALGNTFGSDVKVVDLGIDEKTDVKKEIDLTGIINKKIMQEGTDNIAEGPAMSYETALKAIEIGIETVDELISEGYNLFATGEMGIGNTTTSSAVLKVFTDLPLGDIVGYGSGISDETLEHKKNIVRKAIEINNRIEKINIKDPVDVLAKVGGLDIAGMTGVYLGCAKNKVPVVIDGLISSVGALAAYRLCKDVKGYMIPSHLSEEPGMKYIMKELEIEPFLFMNMKLGEGTGAIMMFPVIEAACNITKMVRKYPILL
>NZ_AP019822.1|WP_026738272.1|2154359_2155232_-|SDR-family-oxidoreductase
MEKIMLAGSTGYLGSYILSELLKRNYSVKAVVRNKSKIKEEFLKNKNLEIFEAELTNPQTLKDCCKDVDVVISTVGITRQKDGLTYMDVDYQANVNLLREAEKFVDNGKSKKRFIYISVFNEEKIENTALCKAKEKFVKELKNSRLDYCVIRPTGFFSDISEIFKMAERGKVYLFGKGEYRMNPIHGEDLAEFCVNRIHSSEQEFPVGGPEIFTQKELSRVAFKISGKKEKIVYISDKIRVLILKIGKFLMPKTKFGPIEFFLNAMSIDMVAPEYGKHTIEEYFEELKNQ
>NZ_AP019822.1|WP_026738273.1|2155271_2156564_-|glutamate-1-semialdehyde-2,1-aminomutase
MKTENSKQLFEEAKKAIPGGVNSPVRAFGSVKKDYPIFIERAKGSKIYDEDSNEYIDCIGSWGPMILGHNYPEVLECIKKEVEKGTSFGLPTKKEVELAELVKDCFPSIEKLRLTTSGTEAAMAAVRVARAYTGKNKILKFEGCYHGHSDSLMVKAGSGLLTFEHQDSNGITDGVIKDTITLPFGDIKKVRELFEKEKDIACIILEPIPANMGLIETEKEYLEELRKITEKENVLLIFDEVISGFRVALGGAQQLYGITPDLTVLGKIIGGGYPVGGFGGCEDIMNLISPLGNVYHAGTLSGNPVSVAAGIKTISILKDNPDMYTKLNEKVAQFVKKLEKLVEKYNISATVNSAGSLFTIFFSDKKVKNLDDAINTSDEMYNIYFDTMTENGIMVPPSKYEAHFISIIHSEEEMQKILEITEKAFQKMRK
>NZ_AP019822.1|WP_026738274.1|2156904_2158446_-|uroporphyrinogen-III-C-methyltransferase
MSKGKVYIAGAGCGDEKLITVKLRNIIKEAECIIYDRLVNESILQYAQPDAELIYMGKANTEGGELQREINETIVKKGKEGLKVLRLKGGDPFVFGRGGEEIEVLIAENIDFEVIPGITSSIAVPAYAGIPVTHRGINTSFHVFTGHMKIDGNELDFPTIAKLDGTLIFLMGLSNLEKIVTNLIKNGKNPETPVGIIKDGTTAKQKTYVGTMSNIVDIVKENNIKSPVIIIIGEVVNLREKMKWFEDKPLFGKNILVTRNKEKQGDITNKINELGGQALNLPFINIEYIDYEMPDLSKYSAILFNSINSVAGFMRKIKDIRILGNVKIGVVGEKTDEEMRKYKIIPDFYPKKYTVEKLAEECVNFTKEGDNVLFIVSDISPVNEEEYTKLYKRNCKKLVVYNTKKVKVEKEKAERYVEKSDILMFLSFSTFEAFAESIDLTGNEEMKKILNEKTVASIGPVTTKTIEKYGIKVGIEAEKFTEEGIVDALLKRKQKILSAFLEKVAKNRRLKFY

Crispr_ID: NZ_AP019822_7

• CRISPR_ID: NZ_AP019822_7
• CRISPR_location: 2183314-2183421
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019822_7

Consensus_repeat	Method
CCCAAAACGGCACACATACGATAAACCATACTACT	CRISPRCasFinder

spacers of NZ_AP019822_7

>7.1|2183349|38|NZ_AP019822|CRISPRCasFinder
GCAGACCGCATCTTTTACTGCTGCGTCTTTATTGGATG

CRISPR arrays and Neighbor proteins around NZ_AP019822_7

CRISPR arrays

The CRISPR arrays of NZ_AP019822_7

>merge|NZ_AP019822|7|2183314-2183421|CRISPRCasFinder
CCCAAAACGGCACACATACGATAAACCATACTACTGCAGACCGCATCTTTTACTGCTGCGTCTTTATTGGATGCCCAAAACGGCACACATACGATAAACCATACTACT

>NZ_AP019822|7|7|2183314-2183421|CRISPRCasFinder
CCCAAAACGGCACACATACGATAAACCATACTACT	GCAGACCGCATCTTTTACTGCTGCGTCTTTATTGGATG
CCCAAAACGGCACACATACGATAAACCATACTACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019822.1|WP_026738294.1|2181766_2182459_-|cobalt-ABC-transporter-permease	unknown	unknown	gnl|CDD|274139
NZ_AP019822.1|WP_006807221.1|2189099_2189633_-|50S-ribosomal-protein-L6	unknown	unknown	gnl|CDD|235495
NZ_AP019822.1|WP_026738296.1|2184052_2185084_-|sirohydrochlorin-cobaltochelatase	unknown	unknown	gnl|CDD|368778
NZ_AP019822.1|WP_006807209.1|2176709_2177075_-|DUF488-family-protein	unknown	unknown	gnl|CDD|225730
NZ_AP019822.1|WP_026738293.1|2180967_2181774_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224047
NZ_AP019822.1|WP_006807212.1|2178907_2179552_-|precorrin-8X-methylmutase	unknown	unknown	gnl|CDD|376825
NZ_AP019822.1|WP_026738289.1|2176187_2176694_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240053
NZ_AP019822.1|WP_006807202.1|2186045_2187344_-|preprotein-translocase-subunit-SecY	unknown	unknown	gnl|CDD|236412
NZ_AP019822.1|WP_006807185.1|2189664_2190060_-|30S-ribosomal-protein-S8	unknown	unknown	gnl|CDD|234658
NZ_AP019822.1|WP_026738290.1|2177099_2177720_-|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	unknown	unknown	gnl|CDD|381171
NZ_AP019822.1|WP_006807240.1|2188207_2188705_-|30S-ribosomal-protein-S5	unknown	unknown	gnl|CDD|234790
NZ_AP019822.1|WP_026738297.1|2185235_2185754_-|small-multi-drug-export-protein	unknown	unknown	gnl|CDD|377692
NZ_AP019822.1|WP_006807208.1|2187387_2188002_-|50S-ribosomal-protein-L15	unknown	unknown	gnl|CDD|235523
NZ_AP019822.1|WP_006807199.1|2190081_2190369_-|30S-ribosomal-protein-S14	unknown	unknown	gnl|CDD|181574
NZ_AP019822.1|WP_006807192.1|2188007_2188187_-|50S-ribosomal-protein-L30	unknown	unknown	gnl|CDD|180163
NZ_AP019822.1|WP_006807217.1|2188723_2189086_-|50S-ribosomal-protein-L18	unknown	unknown	gnl|CDD|235524
NZ_AP019822.1|WP_026738292.1|2179615_2180971_-|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl|CDD|234896
NZ_AP019822.1|WP_026738291.1|2177741_2178875_-|cobalamin-biosynthesis-protein-CbiD	unknown	unknown	gnl|CDD|234615
NZ_AP019822.1|WP_026738295.1|2182445_2182748_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|179494
NZ_AP019822.1|WP_006807207.1|2175195_2175765_-|precorrin-6Y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiT	unknown	unknown	gnl|CDD|225151

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019822.1|WP_026738294.1|2181766_2182459_-|cobalt-ABC-transporter-permease	gnl|CDD|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	5.37223e-23
NZ_AP019822.1|WP_006807221.1|2189099_2189633_-|50S-ribosomal-protein-L6	gnl|CDD|235495	PRK05498, rplF, 50S ribosomal protein L6; Validated.	1.17187e-108
NZ_AP019822.1|WP_026738296.1|2184052_2185084_-|sirohydrochlorin-cobaltochelatase	gnl|CDD|368778	pfam06180, CbiK, Cobalt chelatase (CbiK). This family consists of several bacterial cobalt chelatase (CbiK) proteins (EC:4.99.1.-).	1.64338e-70
NZ_AP019822.1|WP_006807209.1|2176709_2177075_-|DUF488-family-protein	gnl|CDD|225730	COG3189, COG3189, Uncharacterized conserved protein [Function unknown].	2.78842e-32
NZ_AP019822.1|WP_026738293.1|2180967_2181774_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl|CDD|224047	COG1122, CbiO, ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism].	2.45653e-93
NZ_AP019822.1|WP_006807212.1|2178907_2179552_-|precorrin-8X-methylmutase	gnl|CDD|376825	pfam02570, CbiC, Precorrin-8X methylmutase. This is a family Precorrin-8X methylmutases also known as Precorrin isomerase, CbiC/CobH, EC:5.4.1.2. This enzyme catalyzes the reaction: Precorrin-8X <=> hydrogenobyrinate. This enzyme is part of the Cobalamin (vitamin B12) biosynthetic pathway and catalyzes a methyl rearrangement.	6.79946e-100
NZ_AP019822.1|WP_026738289.1|2176187_2176694_-|NUDIX-domain-containing-protein	gnl|CDD|240053	cd04697, Nudix_Hydrolase_38, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.16201e-13
NZ_AP019822.1|WP_006807202.1|2186045_2187344_-|preprotein-translocase-subunit-SecY	gnl|CDD|236412	PRK09204, secY, preprotein translocase subunit SecY; Reviewed.	1.53928e-162
NZ_AP019822.1|WP_006807185.1|2189664_2190060_-|30S-ribosomal-protein-S8	gnl|CDD|234658	PRK00136, rpsH, 30S ribosomal protein S8; Validated.	3.10047e-80
NZ_AP019822.1|WP_026738290.1|2177099_2177720_-|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	gnl|CDD|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	4.75187e-75
NZ_AP019822.1|WP_006807240.1|2188207_2188705_-|30S-ribosomal-protein-S5	gnl|CDD|234790	PRK00550, rpsE, 30S ribosomal protein S5; Validated.	2.92944e-86
NZ_AP019822.1|WP_026738297.1|2185235_2185754_-|small-multi-drug-export-protein	gnl|CDD|377692	pfam06695, Sm_multidrug_ex, Putative small multi-drug export protein. This family contains a small number of putative small multi-drug export proteins.	4.56401e-43
NZ_AP019822.1|WP_006807208.1|2187387_2188002_-|50S-ribosomal-protein-L15	gnl|CDD|235523	PRK05592, rplO, 50S ribosomal protein L15; Reviewed.	3.32658e-64
NZ_AP019822.1|WP_006807199.1|2190081_2190369_-|30S-ribosomal-protein-S14	gnl|CDD|181574	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed.	8.57229e-45
NZ_AP019822.1|WP_006807192.1|2188007_2188187_-|50S-ribosomal-protein-L30	gnl|CDD|180163	PRK05611, rpmD, 50S ribosomal protein L30; Reviewed.	1.5891e-18
NZ_AP019822.1|WP_006807217.1|2188723_2189086_-|50S-ribosomal-protein-L18	gnl|CDD|235524	PRK05593, rplR, 50S ribosomal protein L18; Reviewed.	2.22756e-59
NZ_AP019822.1|WP_026738292.1|2179615_2180971_-|cobyrinate-a,c-diamide-synthase	gnl|CDD|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NZ_AP019822.1|WP_026738291.1|2177741_2178875_-|cobalamin-biosynthesis-protein-CbiD	gnl|CDD|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	5.13894e-147
NZ_AP019822.1|WP_026738295.1|2182445_2182748_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein	gnl|CDD|179494	PRK02898, PRK02898, energy-coupling factor ABC transporter substrate-binding protein.	3.8712e-37
NZ_AP019822.1|WP_006807207.1|2175195_2175765_-|precorrin-6Y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiT	gnl|CDD|225151	COG2242, CobL, Precorrin-6B methylase 2 [Coenzyme metabolism].	8.56019e-64

Protein sequences

>NZ_AP019822.1|WP_026738295.1|2182445_2182748_-|energy-coupling-factor-ABC-transporter-substrate-binding-protein
MAENKDKNVFKKNIILVVIILLIGAVPLFTVKADFGGSDDKGEEIIGEINPDYKPWASSLIEELPSETESLLFALQAAIGAGVIGYVLGYFKGERKNADR
>NZ_AP019822.1|WP_026738294.1|2181766_2182459_-|cobalt-ABC-transporter-permease
MLIDKISYGNPIKDINPGIKFLLSMTTLIFLLCTENKGVIVFNLVLFNLLLLFVVKVKVSDLLKLNFIPALFILTTVISLLLIKADIWLFLLRSFAGLSVVYFLICSTPIIDLDYIFGKLRFPKIFREMFLLIYRYIFLLFDNKEKLQNSQEVRLGYSSFKNSMKSFPMLVVAILRKTYYYNSNSIKAVESRLGKEFIFSPRKYKKIGIEAVFTISVIIINLYLVVRYYA
>NZ_AP019822.1|WP_026738293.1|2180967_2181774_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MLKLENITFSYDEETEALKDISLNIEKGKKTVFLGENGSGKSTVFSIMNGLLQAQKGSVYLNGEKVLHKKKNLEELRKKVGIVFQDPEIQIFAPLVFQEVSYGPENLGYSKEKVEKNITKAMEEINILDLKDRPCHHLSYGQKKRVSIAAITAMEPDLLILDEPTAWLDSKNTKSVSEILNNFADAGKTLVVSTHDTDFAYDFADYIYVLDKGKIVRQGSRDEVFEDFKFLKELNLNIPAVLKITRYLKSKNIDVNDYYTFLEENNLL
>NZ_AP019822.1|WP_026738292.1|2179615_2180971_-|cobyrinate-a,c-diamide-synthase
MKKILIAGAMSGSGKTTLSSILMSSFENVAPFKVGPDYIDPSYHEVFTGNKSRNLDAFMFDEATLKHIFETGAKGKDIAVVEGVMGLYDGIGHEKDNFSTAHVSRMLDIPVILVVNAKGISTSIAAEVLGFKMFDKNVKIKGVILNNVSSEKLYLNLKEAVERFTGIECLGFLPRNEKLTIESRHLGLKQAFEMNASEELAEKKALFKEIAENNLDLKRIWEIAEDFEPESSMDDFEPLKELKDRYKGKRVAMAKDGAFSFYYESNLELMRFSGLEIVEFSPVKDKKLPENIDMVYLGGGYPELYYKELSENISMKESIKEAFEKGVKIYGECGGFIYLTKKLNLTDGNSGDFCGLIDAEISMRNRLNIGRFGYINIETGNGIKTKGHEFHYSEISEDNEKSKGHNHFYKIEKNDERNWSCGYKKKSLLAGYPHISFYSNIEFFKYILETL
>NZ_AP019822.1|WP_006807212.1|2178907_2179552_-|precorrin-8X-methylmutase
MSYIKDPKGIEVRSFEMITEELGDRADRFSEQEKPIVKRLIHTTADFEYADIVEFQNDAVNSAMEALRSGCKIYCDTNMIVTGLNKIGLGKFGASAYCLVNDEDVAREAKERGVTRSMVAIERAVADKDTKIFLIGNAPTALFMLLEKMDKEGENKPKLIAGVPVGFVGCPESKAELSKYDVPFIRTNGRKGGSTVAVAVLHGILYQMYERDRY
>NZ_AP019822.1|WP_026738291.1|2177741_2178875_-|cobalamin-biosynthesis-protein-CbiD
MEEYVYFQGKRLRYGYTTGSSATAATKAALTYLLENGKNDIPEVTIELPSGQPLSIKINSVLKREDYALASVLKDGGDDPDVTHGLEIFSKVSLRNDSEINVFGGIGVGKVTKKGLPVEPGNSAINPTPMKMIRSTVESILPEGMGADVEIFVPKGEEAAKKTLNSKLGIVGGISILGTMGIVKPMSEEAWKVSLAVELKMALAITGTKEAIFLFGNRGKKYLSDHFKDNTSQAVVISNFVGYMFDRACEFEAKKIYFIGELGKFVKVAGGIFHTHSRVSDAKMEILTANCLLVGESMENLKKIMASNTTEEATKYIEKKEVYNLLAKKAKQKCEEYCRRNGWDLEVETLIISAEREELGSSKNFFEHFKRKDETEV
>NZ_AP019822.1|WP_026738290.1|2177099_2177720_-|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE
MKINVLGLGPGSLDYILPAAIKKLKESEVIVGGKRHIESLGEYAANKEYCYITGDLESVLKFIKENRDKKMSLILSGDTGFYSMLTFMKKHFSDDELEVIPGISSVQYMFAKISDYWYDAFISSAHGKEFDYVAKLEEYGKVGMLTDNKNTPQEIARQLSENGMGESTVYVGENLSYEDEKIYKYKALELKDVDYKFKMNVVVLKK
>NZ_AP019822.1|WP_006807209.1|2176709_2177075_-|DUF488-family-protein
MNKLQWKRVYDSVSEDDGFRILIDRLWPRGEKKEAAKIDCWAKEITPTKELRESYHKGMIDYETFSEKYGKELEENTEFKNFVQLIEKELQKENVTMVSAVKEPETSHIPVLRKYIERFLQ
>NZ_AP019822.1|WP_026738289.1|2176187_2176694_-|NUDIX-domain-containing-protein
MEEWDAYNRNGEKLEGTLIRGKSIPEGMYHIVCEVFVEHKDGTYLCTKRAKAKEKFPEYYETTAGGSALKGEDKYSCIKRELMEETGIVCNDFTQVKRTIVDKESFIMYSFVCTVDYDKNSVKLQPGETEDYKWLTKEEFVKFINSNRIIKDQKERFYNYFLEKNIIG
>NZ_AP019822.1|WP_006807207.1|2175195_2175765_-|precorrin-6Y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiT
MFHIKDEEFIRGKAPMTKEEIRAVSLAKLEMKNDDICLDIGGGTGSVTMEMAQFAKDGHVYVIEQKEDAFELIKQNVEKFDLKNVTYIKGEAPEGLSHLDVKFDKIFIGGSGGNLEDIIQYSYDNLKEKGILVLNFIVLENVFNAIETLKKIPFKDTDICQIIVSKNRKVKDFNMMMAENPIYVITARK
>NZ_AP019822.1|WP_026738296.1|2184052_2185084_-|sirohydrochlorin-cobaltochelatase
MSKGILVTSFGTSHKDTREKCLDSIQKEVERKYGSEKVERAYTSGVVRRIVEKKEGIHIYDQEEGLKALKDKGYDEIITMSLHILNGIEYSKLSDKYGKITKPLLTTEEDYKRIVNDAEFNDFEGNDVIIFMGHGSESAADITYEKLQEEYNKAGKNNVFVATVEGKVTIEDVIEKLKQTDYKKILLKPFMIVAGDHAKNDMASDEEDSWKTILQNNGYEVTPVLRGMGEYKLIRDMFMEKLDEVYGKNEKNNTELIIKEEEPKMTKRLYRSRTDKKIAGVCGGLGKYFNIDPTIVRIVCVILMLGWGIGLFTYVIAAFVIPEEPIENNKKNEDIIEAEKVDD
>NZ_AP019822.1|WP_026738297.1|2185235_2185754_-|small-multi-drug-export-protein
MKKLAQSIVAFIVGIFGMNAGKIIGIFLISMLPVIELRGSIPVGFSQGLPWYTNMITSIVGNMLPVPFILLFVVKVFEFMKKHNIMVKFIEKLEKRALSRSESVANKEFLGLMLFVAVPFPGTGAWTGALIAALLKLNPKKSFFTILLGVILAAAVVTLGVYGVFGFLKNMI
>NZ_AP019822.1|WP_006807202.1|2186045_2187344_-|preprotein-translocase-subunit-SecY
MTLTEAIVNRIQSIFKIPELKKRVAFTLVMFAIARIGVHIAVPGINMAAFKNFQNNAIAGFLNLFSGGAVQRASIFSLGIIPYINSSIVFQLLGVIFPKIDEMQKEGGKERDKITQWTRYVTIILAIAQSFGIAITLINQPGLVVEPGPKFIISTMALMTGGTAFLMWISERISIRGIGNGSSMLIFLGIVVNLPQVIQQMVSSNINFIFFGLSIILFVVIIALMVDIQLAERRIPIQYAGKGSLGFGGGQSAVGRRTYLPLKINTAGVMPIIFASVLMAAPPFIVQMLKANAFWQKQFSQTGVLYLLLFAFLIIVFSFFYTLTIAFDPEKVSEDLKQSGGTIPTVRAGKETADYLEKVVTRVTFGSALFLAILGIFPNIWFGYFLHIPVLLGGTSLLILVGVAVELIQQIDSYLAVKKMKGFISTSGKNNR
>NZ_AP019822.1|WP_006807208.1|2187387_2188002_-|50S-ribosomal-protein-L15
MNLNELRPAEGSKRERRRIGRGHGSGWGKTAGKGHNGQKQRSGTYVSPVFEGGQMPIIRRIPKRGFSNSAFKKDTIVISLFDIVEKFNDGDVVSLETLVENGIIKNPKFITKYSDAALRETKGKKAVKQYLLENVESYVKEKDFSSILKIIGNAEVNKKLTVKAHKISESAKELIEKAGGSVEVLEVKSYSAKAGNNKKEDENK
>NZ_AP019822.1|WP_006807192.1|2188007_2188187_-|50S-ribosomal-protein-L30
MSKVKVTLIKGINGRKPNHIDTVKSLGLRKISQSVVHNKTADIEGKIKLVSYLLKVEEV
>NZ_AP019822.1|WP_006807240.1|2188207_2188705_-|30S-ribosomal-protein-S5
MAREVKASEYKESLLRISRVSKTVKGGRRISFSVLAAIGDEKGKVGIGLGKANGVPEAIRKAIANAKKNMITVSLKGGTLPHEQLGKYNATSVLLKPASKGTGVIAGSATRELLELAGVTDVLTKIRGSKNKDNVARATLDGLKQLRSVEEVARLRGKSVEEILG
>NZ_AP019822.1|WP_006807217.1|2188723_2189086_-|50S-ribosomal-protein-L18
MIKKLDRNKLRQKKHKSIRSKIVGTAERPRLSVYRSLKNIFVQIIDDQAGKTLVSASTIEKGAKTENGSNVEAAKKIGEAIAKKALEKGIDTVVFDRSGYVYTGRVKALADAAREAGLKF
>NZ_AP019822.1|WP_006807221.1|2189099_2189633_-|50S-ribosomal-protein-L6
MSRIGRKPITIPAGVEIKQDGNKFIVKGPKGQLERELSSEIKVNIKDGEITFERPNDLPNIRALHGTTRANLNNMITGVSDGFAIKLELVGVGYRVQANGKGLTLALGYSHPVEIEAVDGITFKVEGNNKITVEGIDKQLVGQIAANIRAKRPPEPYKGKGVKYADEVIRRKEGKKG
>NZ_AP019822.1|WP_006807185.1|2189664_2190060_-|30S-ribosomal-protein-S8
MHLTDPIADMLTRIRNGNIAKHSEVKIPFSKIKESMANILKNEGYIAGYEIKEEGTKKDIAVTLKYMDGDAVIKGLKRISKPGRRVYTSVENMPKVLGGLGIAIVSTPKGVITDKECRKHNVGGEILCYVW
>NZ_AP019822.1|WP_006807199.1|2190081_2190369_-|30S-ribosomal-protein-S14
MAKRAMVERNLKREKTVDKYAAKRAELKERAKKGDREAIAELSALPRNASPTRVRNRCQINGRPRGFMREFGISRVMFRQLAGEGAIPGVKKSSW

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP019822_3	3.7|940864|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT	940864-940900	37	NZ_AP019822.1	1901964-1902000	0	1.0

1. spacer 3.7|940864|37|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT matches to position: 1901964-1902000, mismatch: 0, identity: 1.0

ataagcacgatcacctgagcctactcggtttcctaca	CRISPR spacer
ataagcacgatcacctgagcctactcggtttcctaca	Protospacer
*************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019822_2	2.3|931374|34|NZ_AP019822|PILER-CR	931374-931407	34	AP013360	Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C16	27620-27653	7	0.794
NZ_AP019822_2	2.1|931365|35|NZ_AP019822|CRISPRCasFinder	931365-931399	35	AP013360	Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C16	27619-27653	8	0.771
NZ_AP019822_3	3.2|940535|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT	940535-940570	36	MK813939	Aeromonas phage 4_L372D, complete genome	104579-104614	9	0.75
NZ_AP019822_3	3.2|940535|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT	940535-940570	36	MK804893	Aeromonas phage 2-L372D, complete genome	95884-95919	9	0.75
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NZ_CP020003	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed1, complete sequence	39729-39762	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NC_011655	Bacillus cereus AH187 plasmid pAH187_270, complete sequence	19008-19041	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NC_010924	Bacillus cereus strain AH187 plasmid pCER270, complete sequence	75417-75450	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	CP045776	Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence	64732-64765	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NC_016792	Bacillus cereus NC7401 plasmid pNCcld, complete sequence	74286-74319	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NZ_CP034397	Escherichia coli strain CRE1 plasmid pCRE1.2, complete sequence	20573-20606	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	NZ_CP034402	Escherichia coli strain CRE10 plasmid pCRE10.2, complete sequence	68022-68055	9	0.735
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	AP014339	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S37-C34, *** SEQUENCING IN PROGRESS ***	33190-33223	9	0.735
NZ_AP019822_2	2.3|931374|34|NZ_AP019822|PILER-CR	931374-931407	34	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	556314-556347	10	0.706
NZ_AP019822_3	3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT	940931-940964	34	MN694695	Marine virus AFVG_250M866, complete genome	17148-17181	10	0.706
NZ_AP019822_5	5.16|1891494|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT	1891494-1891529	36	MN694665	Marine virus AFVG_250M495, complete genome	31643-31678	10	0.722
NZ_AP019822_2	2.4|931440|34|NZ_AP019822|PILER-CR	931440-931473	34	NC_041878	Pectobacterium phage CBB, complete genome	148681-148714	12	0.647

1. spacer 2.3|931374|34|NZ_AP019822|PILER-CR matches to AP013360 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C16) position: , mismatch: 7, identity: 0.794

ttgctat-ttgatttaattttttctcatctattat	CRISPR spacer
-agttatgttgatttaaatttttcttatctattcg	Protospacer
  *.*** ********* *******.*******  

2. spacer 2.1|931365|35|NZ_AP019822|CRISPRCasFinder matches to AP013360 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G1, isolate: uvMED-CGR-U-MedDCM-OCT-S40-C16) position: , mismatch: 8, identity: 0.771

tttgctat-ttgatttaattttttctcatctattat	CRISPR spacer
-aagttatgttgatttaaatttttcttatctattcg	Protospacer
   *.*** ********* *******.*******  

3. spacer 3.2|940535|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT matches to MK813939 (Aeromonas phage 4_L372D, complete genome) position: , mismatch: 9, identity: 0.75

cttcttctgttgcttttaagtagcttgcgtctaaga------	CRISPR spacer
cttcttctgttgattttaagtaact------taacaatcctt	Protospacer
************ *********.**      *** *      

4. spacer 3.2|940535|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT matches to MK804893 (Aeromonas phage 2-L372D, complete genome) position: , mismatch: 9, identity: 0.75

cttcttctgttgcttttaagtagcttgcgtctaaga------	CRISPR spacer
cttcttctgttgattttaagtaact------taacaatcctt	Protospacer
************ *********.**      *** *      

5. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NZ_CP020003 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
tacttcgtgaagaatgggatgtttttagtgatat	Protospacer
*  ** ***************** **** .  * 

6. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NC_011655 (Bacillus cereus AH187 plasmid pAH187_270, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
atattaattaagaatgggatgttatatttacgaa	Protospacer
 *****.* ****************    **.*.

7. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NC_010924 (Bacillus cereus strain AH187 plasmid pCER270, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
atattaattaagaatgggatgttatatttacgaa	Protospacer
 *****.* ****************    **.*.

8. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to CP045776 (Bacillus paranthracis strain CFSAN068816 plasmid p1CFSAN068816, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
atattaattaagaatgggatgttatatttacgaa	Protospacer
 *****.* ****************    **.*.

9. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NC_016792 (Bacillus cereus NC7401 plasmid pNCcld, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
atattaattaagaatgggatgttatatttacgaa	Protospacer
 *****.* ****************    **.*.

10. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NZ_CP034397 (Escherichia coli strain CRE1 plasmid pCRE1.2, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
ataactctaaagaatgggatgttattaatacaaa	Protospacer
 ** .  *.******************. ****.

11. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to NZ_CP034402 (Escherichia coli strain CRE10 plasmid pCRE10.2, complete sequence) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
ataactctaaagaatgggatgttattaatacaaa	Protospacer
 ** .  *.******************. ****.

12. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to AP014339 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S37-C34, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.735

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
ttggtgaaaaagagtgggatattattagaacaac	Protospacer
**. *.. .****.******.************ 

13. spacer 2.3|931374|34|NZ_AP019822|PILER-CR matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 10, identity: 0.706

ttgctatttgatttaattttttctcatctattat	CRISPR spacer
ctgctatttaattttattttttctcccaaaggac	Protospacer
.********.**** ********** .  *  *.

14. spacer 3.8|940931|34|NZ_AP019822|CRISPRCasFinder,CRT matches to MN694695 (Marine virus AFVG_250M866, complete genome) position: , mismatch: 10, identity: 0.706

ttattagtgaagaatgggatgttattagaacaag	CRISPR spacer
ttggcgaaaaagaatgggatattatcagaacaac	Protospacer
**. ... .***********.****.******* 

15. spacer 5.16|1891494|36|NZ_AP019822|PILER-CR,CRISPRCasFinder,CRT matches to MN694665 (Marine virus AFVG_250M495, complete genome) position: , mismatch: 10, identity: 0.722

tatagccacttcattaaaagctatttttctaaaaac	CRISPR spacer
ctttttaagtttattaaaagctatatttctaaaaaa	Protospacer
. *  . * **.************ ********** 

16. spacer 2.4|931440|34|NZ_AP019822|PILER-CR matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 12, identity: 0.647

agcggaatattcagtggaatcaatgaaatattca	CRISPR spacer
ttacgaatatccagtggaatcaatcaaaccagtt	Protospacer
    ******.************* ***.   . 

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	343194 : 353080	21	Campylobacter_phage(10.0%)	NA	NA
DBSCAN-SWA_2	778128 : 789789	12	Bacteriophage(25.0%)	NA	NA
DBSCAN-SWA_3	954694 : 966505	10	Dickeya_phage(33.33%)	NA	NA
DBSCAN-SWA_4	1182111 : 1187959	6	Synechococcus_phage(33.33%)	NA	NA
DBSCAN-SWA_5	2013442 : 2020611	6	Staphylococcus_phage(50.0%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_AP019822|343194:353080|DBSCAN-SWA
GATGAGAAAAGTAAGCAAAATGCAAAATAATTTGAATAATAACTTTTATTCAGATGAATGGAATACGGATATTAAAACAGTCAATAAAATGATTGAACTTTTAAATCCGTTTCCTGAAAGTAAAATTTTGTGTCCTTTCGACACTGAAAACTCAAATTTTGTGAAACAGTTGAAAGAGCAAGGACACGAAGTTATATACGGAATAAACGATTTTCTCAAAAGTAATAAATATAATTTTGATTATATTATCACAAATCCGCCTTTTTCTATAAAGGACGCTGTAATTGAAAAGTGCCTTGAAAGCGGGAAAAGGACGTGCTTAGTATTACCACTTGAAAGCTTAGCTGGAGTAAAAAGGCACAGAATTTTTGAGAAATATAATACAAAACTTGAAATATATATTCCGACCCGCAGGGTAAATTACTACGATAAAAATTGGAAGAAACGAGACGGAAGTAATTTTCATAGTATATTTATTATTTTTGATAAAGCAAATGTCGAAACGAAAATAACATTTGAATTTGAAGAAGAGAAAATCAAACAATTAAATCTATTTTAGGAGGAATTGTGGGAGAAAAATCAGAGATAATACAAAAAGTAGACAGTATCAATAATCCGCAGCATTACAAACTTAACGGATTGGATATAGAAAGTATTGATGTTGTGAGATCAGTTCTTGGAAAAGAGAAATTCATCGGATTTTGCAAAGGAAATATACTGAAATACTTAATCCGGGAAGAGAACAAGAACGGATTGGAAGATATAAAAAAAGCCAGAAAATATACGGACTGGCTAATAAAGGAAATGGAGGGGTAAAGATGAATGAATTGAAAACGATAGAAAAAGAGAATTTTAAAATTTTTAACAAAGAGAATTTAGGAAGCGTAAGAACGGTATTAGTGGACGGCGAAGTTTGGTTCTGTATAAAAGATGTATGCAATATTTTAGGATTAACAAATCCTACTATGGTAGCTCAAAGATTGGACATGGACGAACAGGCTAAGTTTGACTTAGGGTTATTAAATAAAGAGCTTACGAACTTTGCAAATGAAAGCGGTCTTTATACTTTGATTTTGAGAAGTGATAAACCTGAAGCCAAGACCTTCAGAAAATGGATAACTTCGGAAGTGATACCGTCAATCCGTAAAACAGGAAACTACTCAATTCAAAATCCTGTTGAAGCTTTGCTTGAAAATCCTGTAAAGCTTGGAGAAATGCTGATTGAATACGGAAAAGCAAAAGAACAATTAAAAATACAAGCTCCTAAGGTACAAGCGTATGAAAATTTGTATGAAAGCGATGCCGTTATGGATATTGGAGAAGTATCTAAAACAATAAATTTCAAGGGAATTGGAAGGAATAACTTATTTGCAATTTTAAGACAACAAGGAATATTGAACTCTAATAACGATCCATATCAGGAATATGTAAATAGAGGATATTTTAAATTAATCCCGACAAATTATGTTGATAATTTCGGGAATAGGAAGATGAAAACAGTCGTTTATATGAAAGGGATAGAAGCGATTACAAGGTTATTGCTGAAATTAGGATATACAAAAATAAATCCTAACTATAGTGTGGCAATAAACTAAAAAAAAGACACTTTATAGAGTGTCTTAAAAGGAGTTGGTTATTTAATTTTATAGCTAATTATATCATGAAAAACGGTGTTTGTAAAGGAGTTTAGATGAGTTTTAAGGAACATAATAACCGAATAAAAGCAAAGAATTTCGCTGAATATATCACGGGAGAAGAGTTAAGAAAATATGTAGCTTCCAAAGTTAAAAAATATGTCGGAGAAAATCCAACGATATTTGACGGAGCTTTAGGAAGCGGACAGCTTGAACAGTACTGCAATCCTGAAAAAATCTATGGTGTCGAAATTCAAGCAGAAAGTTGTGAGGCAGCAAAAGAGAATTATTCCGAAATTGACATTGAAAATAAAAGTTTTTTCAATTTCACGAGAGATAATTTTGTAGCTGATTGCGTGATTATGAATCCGCCGTTTTCGATTAAATTCAAAGATTTGTCAGAGGAAGAACAAGAAAATATCAGGAATGAATTTAGCTGGAAAAAGAGCGGAGTTGTCGACGATATATTTGTGCTTAAATCACTCAAATATACGAAAAAATACGGCTTCTACATACTATTTCCTGGTGTCGGATACAGAAGCAGTGAGAAAAAGTTTCGGGAAATTATTGGAAACAGTCTGCAGGAACTTAACATGATAGAAAACGCTTTTGAAGACACAGGAATATCAGTTTTATTTATTGTTATTGATAAGGAAAAAACAGACAATAAAGTTACCAAAGAGTTGTATGATTGTAAAACTAAAAGTCTTCTTAAAATTGAAGAAACGGATCTCGAAGAAGACTTTCGTTGGCAACCGACACAGTTGGAAAAAGAAACAGAAGAAATTAATATAGAAGAGCTTAAAGATGACTTAAAACGGTCATTTTTAGGGCATATTGAAAATAGCTTAGATTTAGAATTATTTCTATTTAGAACGCTTGGAGAAGGAGAATTTCTAAGCTATTTAGCAGCAATAAAAGAAATTGTACGAAAGTACGAAAGAAAATATCTGATAGGAGATGAAGAATGAAAGATATAGTAGAAATCTATAAAGAATGTGGCGATTTTCACGAATCAGTTAAGAGAAGTGGACTTACTCCACTTGTTGCTCACATAAAATTAATGAAAAGCGGTGTTTTGAAAATACAAGACAAAATAAAATATGCCAGTAGAGGTGGAAGATTAGGGGGACTGGCAGAGGAACTATTTCAAAAATTAGTTCCTGATGCTGTGGATGCTAATAAATATTGGCAAAAAAATAATCCTATTTACGATTTCATGTATAAAGGATTGACCATAGACGTCAAATATAGCAGCTATCATTCCCGAGGGAAGAAAACAAACTACTGGAATATACGGACAAAAGGGAAACAGAACATAACAGTAGCATTTTTAGAAAGAAAAAGTGGAGATGAATTGAAAAATCCTTACTGCTTATTAATCCCAAACGGCTTTATCGGGACCAAATGCGATACTCACGTATCTAAGAGTGGAGAATGGTTTCAAAACTTTAGAATAGAACTGGACGAACTACAAAAATACTTAGATGAGTATGCGGAATTTGTTTAAGGAGTAACTATGAAAAGAAATTGGACATTAGGAGAAATAGAAGATTTAAGAATAATGATCGAAGTGGAAGGATTAAGTCACAGGGAAGCGGCAGAGGCACTTGGAAGAACAAAACAATCTGTTTGTCACAAAGCTAGGATATATAAATTTAAAACATCGTATTTTATGGATAAAAGAAAAAAGATAGAATTAAGAAACTTAGTTGAAAATTCAACTATTGATAAAAACACCATTTGTAAAAGATTGAAAATAACAAAAAGATCCTTAAATTATAGAATGGAATTGATGTATAAAACATGCAATTTAACAAATATAAGAAATAAAGGGTTATTTAAAAACAATGGTAAAAAATGGTCGCAGGAAGAAGACGATTTTATTTACAAAAATTATTATAAAATAGGAAGATTGAAAACAGCCAAAGCGTTAGGGAGAACTCTTGGAGCATTAAAAAAAAGAATGTTTGATAACATAGATAAAAAATTGTTAGAAAAAGGTTTTTATACAAAAGGTTGGAACTTTAAAGAACGAACGAGAATATGGAAGGAAAGCAGGGATTTATGAAAACAGAACAAGAAATAAGGGAACTGCTTGAAAGATTCAAGGAAGAAAAAGAAGCAGTATCAAAGGATGAAAACTTGACGATAGAGCAAAGAAACAAGGAATTTAACAGATATTTAGACAGAATACATCTGTTAAGAAGAATTTTAGAAGATTAGAGGTGTCGGAATATGGCCAAAAAATTAATAAATAAAAAGGGGAATTATACAACAATACAAAACGAATTAATAAATGACAAAAGCATATCTTTAAAGGCTAAGGGAATATTGCTATATATGCTGTCAAAACCATATGACTGGAAATATAATCCAAAAGAAATAGCAGCAAATTCAAAAGACGGATTAGATTCAGTATACAGCGGGTTAAAAGAACTTATTGAAGCGGGATATGTAAGCCGAAAGCGATATGCTGACGGTAGGGTAGATTATTATGTTTTTGAAGATAAAAGCGAAAATGACATTGAGGATTTTTCTTTAAAAGAAGAAAACCCAAATCGGGAAAACCCAAATCGGGAAAACCCAAATCGGGAAAACCCAAATCGGGATTTTCCCGACGTATACAAAAGAAAGAATACTACTAAAGAAAGAAATATACTAAATACTGAATATAACAAAAAAGAAAATAAAAAAGAAAGAAACGAAATTGATGATTATATAAACGCTGCTCAAAAAAGTGAGGAGTATAAAAATCTACTTTTTGAGTTTGTAAAATATAGAAAAAAGATAAAATTATCTTTAAAAACTCCAGGACCTCTTAAGACATTGATTAATTTCTTTCCGACAGAAGAACTTTTAAAAGAAGCTTTGGAATATATGGATATGTATAACTGGAGGACAGCTGAACCACAATGGATAGAAAATAAAAAGCAAGGAGGAAACAATAATGGTGGAAAGCGTGCAGGATATAGCAAAACGAATGGAAAACATTCGGAAAAACCAGACTACTCAACGGGATTTGAAGACTGGAACTAATAATTATATGGCTGAAACTGTGGATTGGGATGAAGAAATAAGAAAACAAGAAACGAAAGAATACCAAAGACTTTCAAATATTTTGGAAGAAGAAAAACAAATAACTTTTAAAAAAGCTGATTGTAAAAATGATACTGAAAAAAAACACAAAAAATCATTTGAAAATTTTTGCCGGAACTTTGAAGAAATAAAAGAAATCGGATTAGGCATTTTCATGTACGGCGAATGCGGAACAGGAAAAAGTTACTACTCGGTTTGTATTATGAATGAACTCAATAAAGAATATAAAGTTTACCGAACAAGCCTATTTGATTTACTTGAAGAAATAAGACAGACGTATAAAAAATATACGGATGCAACGGACGAGTATTTATTTAAAAGGTTAAAAAAGTCGGATCTTGTAATTTTTGATGACTTAGGAAATGAAATGATAACAGATTGGGGAAAAGAAAAAATGTTTTTGATTTTTGAGTTTTTGTACAAAAATCGCGTTTCTTTTATCATAAATACTAACTTAGATAATAAACAGTTTCAAGAGTTTTTGAGAATCAATGGAAGTCCGAAGTTATTTGATAGAATCCGAGAACGTTGCAAAAGCTATAAATTTGATTGGGATAGCAGAAGAAAAGATTTGCATAAAGCGGATTTTGAAAGATTGTTTTAGGAGGAGCAAATGGTGACTAAAGAAATTTTACGAAAAAGATTGGATTTGATTGATAAAAAAATCGAATTTACAGAAAACAGAATAAAATCCTATGAAACCGAACTTAAAAAGTTGAGAAAAATAAAATTTGAGATAGAAGAAGAATTAAATGAAAAGTAGAAAAGTAAATCTTTATTATTTCCAAATATGGCACGGAGATAATAAAGTTGAGATAAAAACAGATAAATGGTCGGAGATAGTAGATTTTGTCAAACTACATAAAAAGGGAGTAACAGGCTTTAATCAAGGCTATAAGAAAGTTCCTGAAAGCAAATTACAGCATTGTATTGATAATGTGAGTATTGAAGACCTAATGACTTTGAAGGAGTGAAGATGTTAAAAATATTGCAAGGAGACGCACTTGAAAAAATAAAAGAAATTGAAACAGAAATGAGTAGAGTGCGAGGTATAATAAGCGATTATCAAGATACGGTAGATGAAGCTGATCGTCTTATTTATGAAGACGACCAAGATATTTCAGAATTAGAATATATACTTGAAGAATTAAAAGACATATTTTAGGAGGAATTAAAAATGGAAGCATTAAAAACGTTTGATGTTAAAGAATTATTGAAAAGACAAGCTGAGCTTGATAGAAAATTTGACGATAAAGAAACTTTGAGAAAAAGAACAGAAAGCAGAGTTTTAATAGCGTATTTTACAGAACTCGGAGAACTGTCACAGGAACTTAAAGGGGAGTGGAATTATTGGAAAAATACAGCTAAAAGGTACGACAAGAACAGAGTTTTAGAAGAATTGTCGGACGTGCTACACTTCTTTTTAAGCTATCTTAATTTAAGAAAATGTATGAAAACAGCCAATTTTGAGAGATTAGAACTGGACATAATACAATATCATTACAATGAAAGCATCGAAATCAGTTTAGAATGCTTATTTGACTTAGATACGATCTTAATCGGAGTCGAGGCATATCATTATTTTAGACAAATGTTAAACATAGTAATGAAAATCGGTGCATCGGAGCAGGAGTTTTTAAAAGTACATCATGAAAAATGGCTTAAAAATATGAACGAAAGAACTAAGGAGGAATACTAATGAATTGCAAATATTTAAAAATGAAAAGATAGGACAGATAAGGGCTTTAAAAAAAGATAACGAAATTTATTTCGTAGGAAAAGATATTGCTGAAATTTTAGGGTATAAAGATACGTCGAAAGCAATAACAAGACATGTTGAAGAAGATGACCGTATGAAATGTCCTGTCGTCGATAATATAGGAAGAGAACAGGAAACTTGGATAATAAATGAAAGTGGTTTTTATTCTTTAATAATTTCGAGCGAAATGAAAGAAGCGAAAGAGTTTAAAAAGTGGGTAACAAAAGATGTCTTGCCGAGTATCAGAAAACATGGAATGTACGCTACCGATGAGTTATTAGAAAATCCTGATTTGTTAATTCGAGTTGCTACAAAATTAAAAGAAGAAAAAGAAAAAAATAAGCAACTGAAATTAGAACTTGCTTACAAATCTGAAATAATTGAGGGAGTAACAAATAATATTGATGTGTACAAGAAACAAGATATTTTAAATAGAGTTGTAAAGCACAAAGGAGCCAACTATAGAGAGCGTTGTGGAGAATTATACAAAGTCTACAGAGAAACACATCATGTAGACTTGAAGGCGAGAAAAGAAGGCTACAATAAAACTCAAATCAGGAGCAGAGACAAGTGTAAAAGTGTTATTGAATATGCTGTTAAATTTGGACATATAGATAATCTTTATAACATAGCTTTGAAAATGTATGAAACGGATATGAACGAAATTATAGAAAAAATAAGAGAGGTGGCTTAGTTATGAATAGCAAAGAATACGGGAAATTTCAAAAATTATTAGATGATTTTGATGTGCAGGACAAAATATCAGATTTATTTGTGAGTATAGCGAAATGTTTAAAATATGAGTTAAGAGATGAGGACATGACGGATATAACAGAGCAAATAATAAAAGAAGAAATTGGAATGGAAAGAATAGATACGGAAACAATAACATTTATAGCTTTAAAAGAATTTGAAAAATGGAAAAGTCAATAAAAGAGGTGTCGAGATGAGAAGAGAAACGAAAAGAACTTTTGAACTTGTTAGGAAAGTACTTTTGACAGGTTCTGAAATTACTGAAGATGACGGAGAATTTTTAAGAAGAAATCCCGAATTATTTGCAAATTTTAAATTTAAAAAAGTTAGGAGAGCAGATCCGAAATGGCGATTACTTTTAAATAATAAAAAAATTAAAGTGGAGGTGTAGGAGTTGGATAATGACATCATAAGAGGCACATTTGAAGTGGATTTGAATACCGGGATAACAAAATATAATCTGACTTCTACGCATACAATTAAGCAAGAACGGATAAAATCGCTGGAAGATTTTTTGGAAAATACTGTTGCAGAAGTCAATGTTGATAAAAGACTGACTACGGAGCAACGGAAGAAAATTTGGTGTATTTTGGATGATTTTGCTTATTGTAACGGAGGAGATAAAGAACAGTGGCGAGAGCAATTACAGACTGAATTTTGCCGACAAAGAGATTACGAATACTTTAGCATCTCGGAACTTAAACGAGACGGAGCGAGTAAAGATGTAGCACGGGAATTCATACAATGGTTATGTGAACTTGCTGTAACTGAAAGCATAGGTTTTAGAGAGGAAACAGGTAATCCTGCCCTATGGGTGCCTGATATTGGTAGATATGTAATAGCTTGTTTAAGAGCGAGAAGATGTGCTGTATGCGGAAAGGTACATGACTTTGACAACGGAGATATAGTTGATTTAGATCATTGGTCGACAATCTCAAGTAGTGCAGGAACGTATGAAAATGATGATGGTTTGCAAAATCCTTTTGTCTCTTTGTGCCGGTTACATCATTCTGAAAAACACAATATTGGAGTAAAAAGTTTTGAAGAAAAATACCATATAGGTGGAATCTGGCTTAACGAACAGTTAGTATATGAGCTACTCGATGTTTATCCGAACCATTTTAGACTTTTCAGGAAAAGATTGAAAGAGGGGTATTATGACAATGTAATTACAAGGAAGGGAAAGAATGAATGATGTCACAAGAAAAGAAATAGAAGAAATAAGATATTTGAGAGAAGTCGAAAAACTTAAAATAAAAGAAATTTCAAAACTTTTAGGAAAAAAATCAAGAAGAATATCTTATATTATTCAAAAATACACTAAATATAGATATAGAAAAATTTTTGAAGATCAGGAAAAAGAAAAGATTATTAAAATGTTTGAAAGTGGGTATACAAAAGAACAAATAGCAAATACAACAGGAAGAACATTTTACGGTATTTCAAATTTCCTTACAAGACATTACGGAATCACAAATTCTTACAGATTAGTGAGAAAAAATAATTTCAAAAAATGGTCTAAGGACGAAGAAGATTATATTTTGAAAAACTATGAACACAAGACAGCTGTTCAGATAGCAAAAGATTTAAACAGGACTGTTTTGGGAGTCAGGACGAGGATCATAAAAATGAGGAGAGAAAAAAGAAAAATATAGAAGAGAAAATTACGGCGGAGGATATACAGAGTATTCAAAAAACGGCATCAAAGGGACGAATCCGCCAATAATAACAAAAAATCCTTTACATTCGGGAATAAAAATAAAAAAAGATTTTAATAGGAGGAGAAGATAGATGAAAATATTTATTGTAGTAATACTAATGTTATATATATTGATTACGTCGGATATAATAATTAAGACAATAAATCTATTTGTAGTAAGCGATTATGACCGCGAAGAATATAAAGCATTTTTTGTTATAATGATATATATCTTAAGTATAATAGGGTTATTGATGTATATATACAATATCTTGAAATTATAAAATAAATCGGGAGGTTATTTTAAAAGTGAAAGAATTGAAATGTAAATTTTGCAAAAAAAAGAAAATGGAATACGAAATAAAAGGCGGAAGATTTAATTATGATTTCATATGTACGAGGTGCAAGAAAAGAAATATAGGAACAATAGTCGATAAAACTCATAAAAATACCCCGCAAGGTTGAGGTCTGATGTTTAAAATAAATTGTAACTGATAAACAAAAAAATCAGTACAACTGCTATTTTAAGCATTACAGTACCTCCTTATAAAAATATAGTGGCTTTTTGGAAGCCAAAATTATTATAACAAAAAAGACTGGAAAACACCAGCCTTTAATCCAAAAATTTCTATATTTTTATAAGTTCCCTTTACGGGGTTTGTCTTAAGACAAATGTATTGTATCATAATTTTTTAAAAAAATCAAAAATTTTTGTTGACAAATTAGTCCCAGATATGATATAAAAAATTGGGACTAATAGAGGAGAGGAAAAATGGAAAAAAGAAAATTAAATATCTCTTTCTATAAAGCAGGAACAGGTAAGGCAACGAGATTAACCGTTCCAATAAAGTGGCTAAGAGAATTAGGTATAACAGAAGATGAAAAAAGTATTGACCTAATTTTTGATAGAGAAAATCAGCAACTTATAATAAAAAAGAGATAA

Protein sequences of DBSCAN-SWA_1

>NZ_AP019822|343194:353080|344011_344788_+|WP_051411718.1|DBSCAN-SWA
MNELKTIEKENFKIFNKENLGSVRTVLVDGEVWFCIKDVCNILGLTNPTMVAQRLDMDEQAKFDLGLLNKELTNFANESGLYTLILRSDKPEAKTFRKWITSEVIPSIRKTGNYSIQNPVEALLENPVKLGEMLIEYGKAKEQLKIQAPKVQAYENLYESDAVMDIGEVSKTINFKGIGRNNLFAILRQQGILNSNNDPYQEYVNRGYFKLIPTNYVDNFGNRKMKTVVYMKGIEAITRLLLKLGYTKINPNYSVAIN
>NZ_AP019822|343194:353080|346894_347053_+|WP_154669362.1|DBSCAN-SWA
MKTEQEIRELLERFKEEKEAVSKDENLTIEQRNKEFNRYLDRIHLLRRILED
>NZ_AP019822|343194:353080|348539_348689_+|WP_154669363.1|DBSCAN-SWA
MVTKEILRKRLDLIDKKIEFTENRIKSYETELKKLRKIKFEIEEELNEK
>NZ_AP019822|343194:353080|346346_346898_+|WP_026736995.1|DBSCAN-SWA
MKRNWTLGEIEDLRIMIEVEGLSHREAAEALGRTKQSVCHKARIYKFKTSYFMDKRKKIELRNLVENSTIDKNTICKRLKITKRSLNYRMELMYKTCNLTNIRNKGLFKNNGKKWSQEEDDFIYKNYYKIGRLKTAKALGRTLGALKKRMFDNIDKKLLEKGFYTKGWNFKERTRIWKESRDL
>NZ_AP019822|343194:353080|350381_350618_+|WP_026737000.1|DBSCAN-SWA
MNSKEYGKFQKLLDDFDVQDKISDLFVSIAKCLKYELRDEDMTDITEQIIKEEIGMERIDTETITFIALKEFEKWKSQ
>NZ_AP019822|343194:353080|344883_345798_+|WP_051411719.1|DBSCAN-SWA
MSFKEHNNRIKAKNFAEYITGEELRKYVASKVKKYVGENPTIFDGALGSGQLEQYCNPEKIYGVEIQAESCEAAKENYSEIDIENKSFFNFTRDNFVADCVIMNPPFSIKFKDLSEEEQENIRNEFSWKKSGVVDDIFVLKSLKYTKKYGFYILFPGVGYRSSEKKFREIIGNSLQELNMIENAFEDTGISVLFIVIDKEKTDNKVTKELYDCKTKSLLKIEETDLEEDFRWQPTQLEKETEEINIEELKDDLKRSFLGHIENSLDLELFLFRTLGEGEFLSYLAAIKEIVRKYERKYLIGDEE
>NZ_AP019822|343194:353080|345794_346337_+|WP_026736994.1|DBSCAN-SWA
MKDIVEIYKECGDFHESVKRSGLTPLVAHIKLMKSGVLKIQDKIKYASRGGRLGGLAEELFQKLVPDAVDANKYWQKNNPIYDFMYKGLTIDVKYSSYHSRGKKTNYWNIRTKGKQNITVAFLERKSGDELKNPYCLLIPNGFIGTKCDTHVSKSGEWFQNFRIELDELQKYLDEYAEFV
>NZ_AP019822|343194:353080|352446_352602_+|WP_154669364.1|DBSCAN-SWA
MKELKCKFCKKKKMEYEIKGGRFNYDFICTRCKKRNIGTIVDKTHKNTPQG
>NZ_AP019822|343194:353080|348678_348900_+|WP_026736997.1|DBSCAN-SWA
MKSRKVNLYYFQIWHGDNKVEIKTDKWSEIVDFVKLHKKGVTGFNQGYKKVPESKLQHCIDNVSIEDLMTLKE
>NZ_AP019822|343194:353080|350832_351633_+|WP_051411722.1|DBSCAN-SWA
MDNDIIRGTFEVDLNTGITKYNLTSTHTIKQERIKSLEDFLENTVAEVNVDKRLTTEQRKKIWCILDDFAYCNGGDKEQWREQLQTEFCRQRDYEYFSISELKRDGASKDVAREFIQWLCELAVTESIGFREETGNPALWVPDIGRYVIACLRARRCAVCGKVHDFDNGDIVDLDHWSTISSSAGTYENDDGLQNPFVSLCRLHHSEKHNIGVKSFEEKYHIGGIWLNEQLVYELLDVYPNHFRLFRKRLKEGYYDNVITRKGKNE
>NZ_AP019822|343194:353080|348902_349091_+|WP_026736998.1|DBSCAN-SWA
MLKILQGDALEKIKEIETEMSRVRGIISDYQDTVDEADRLIYEDDQDISELEYILEELKDIF
>NZ_AP019822|343194:353080|350631_350829_+|WP_026737001.1|DBSCAN-SWA
MRRETKRTFELVRKVLLTGSEITEDDGEFLRRNPELFANFKFKKVRRADPKWRLLLNNKKIKVEV
>NZ_AP019822|343194:353080|343194_343752_+|WP_026736992.1|DBSCAN-SWA
MRKVSKMQNNLNNNFYSDEWNTDIKTVNKMIELLNPFPESKILCPFDTENSNFVKQLKEQGHEVIYGINDFLKSNKYNFDYIITNPPFSIKDAVIEKCLESGKRTCLVLPLESLAGVKRHRIFEKYNTKLEIYIPTRRVNYYDKNWKKRDGSNFHSIFIIFDKANVETKITFEFEEEKIKQLNLF
>NZ_AP019822|343194:353080|349629_350379_+|WP_051411721.1|DBSCAN-SWA
MQIFKNEKIGQIRALKKDNEIYFVGKDIAEILGYKDTSKAITRHVEEDDRMKCPVVDNIGREQETWIINESGFYSLIISSEMKEAKEFKKWVTKDVLPSIRKHGMYATDELLENPDLLIRVATKLKEEKEKNKQLKLELAYKSEIIEGVTNNIDVYKKQDILNRVVKHKGANYRERCGELYKVYRETHHVDLKARKEGYNKTQIRSRDKCKSVIEYAVKFGHIDNLYNIALKMYETDMNEIIEKIREVA
>NZ_AP019822|343194:353080|347065_347866_+|WP_051411720.1|DBSCAN-SWA
MAKKLINKKGNYTTIQNELINDKSISLKAKGILLYMLSKPYDWKYNPKEIAANSKDGLDSVYSGLKELIEAGYVSRKRYADGRVDYYVFEDKSENDIEDFSLKEENPNRENPNRENPNRENPNRDFPDVYKRKNTTKERNILNTEYNKKENKKERNEIDDYINAAQKSEEYKNLLFEFVKYRKKIKLSLKTPGPLKTLINFFPTEELLKEALEYMDMYNWRTAEPQWIENKKQGGNNNGGKRAGYSKTNGKHSEKPDYSTGFEDWN
>NZ_AP019822|343194:353080|351625_352093_+|WP_026737002.1|DBSCAN-SWA
MNDVTRKEIEEIRYLREVEKLKIKEISKLLGKKSRRISYIIQKYTKYRYRKIFEDQEKEKIIKMFESGYTKEQIANTTGRTFYGISNFLTRHYGITNSYRLVRKNNFKKWSKDEEDYILKNYEHKTAVQIAKDLNRTVLGVRTRIIKMRREKRKI
>NZ_AP019822|343194:353080|349103_349625_+|WP_026736999.1|DBSCAN-SWA
MEALKTFDVKELLKRQAELDRKFDDKETLRKRTESRVLIAYFTELGELSQELKGEWNYWKNTAKRYDKNRVLEELSDVLHFFLSYLNLRKCMKTANFERLELDIIQYHYNESIEISLECLFDLDTILIGVEAYHYFRQMLNIVMKIGASEQEFLKVHHEKWLKNMNERTKEEY
>NZ_AP019822|343194:353080|352229_352421_+|WP_026737003.1|DBSCAN-SWA
MKIFIVVILMLYILITSDIIIKTINLFVVSDYDREEYKAFFVIMIYILSIIGLLMYIYNILKL
>NZ_AP019822|343194:353080|343760_344009_+|WP_026736993.1|DBSCAN-SWA
MGEKSEIIQKVDSINNPQHYKLNGLDIESIDVVRSVLGKEKFIGFCKGNILKYLIREENKNGLEDIKKARKYTDWLIKEMEG
>NZ_AP019822|343194:353080|352909_353080_+|WP_146966338.1|DBSCAN-SWA
MEKRKLNISFYKAGTGKATRLTVPIKWLRELGITEDEKSIDLIFDRENQQLIIKKR
>NZ_AP019822|343194:353080|347780_348530_+|WP_026736996.1|DBSCAN-SWA
MESVQDIAKRMENIRKNQTTQRDLKTGTNNYMAETVDWDEEIRKQETKEYQRLSNILEEEKQITFKKADCKNDTEKKHKKSFENFCRNFEEIKEIGLGIFMYGECGTGKSYYSVCIMNELNKEYKVYRTSLFDLLEEIRQTYKKYTDATDEYLFKRLKKSDLVIFDDLGNEMITDWGKEKMFLIFEFLYKNRVSFIINTNLDNKQFQEFLRINGSPKLFDRIRERCKSYKFDWDSRRKDLHKADFERLF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026736992.1|343194_343752_+	hypothetical protein	J9SPF3	Campylobacter_phage	6.9e-09	40.0
WP_026736993.1|343760_344009_+	DUF3310 domain-containing protein	E8ZDM1	Streptococcus_phage	1.9e-14	52.1
WP_051411718.1|344011_344788_+	phage antirepressor KilAC domain-containing protein	B3VGL7	Mycobacterium_virus	4.7e-32	39.5
WP_051411719.1|344883_345798_+	N-6 DNA methylase	A0A0M3LQ47	Mannheimia_phage	2.2e-68	60.6
WP_026736994.1|345794_346337_+	hypothetical protein	NA	NA	NA	NA
WP_026736995.1|346346_346898_+	hypothetical protein	NA	NA	NA	NA
WP_154669362.1|346894_347053_+	hypothetical protein	NA	NA	NA	NA
WP_051411720.1|347065_347866_+	helix-turn-helix domain-containing protein	Q0H278	Geobacillus_phage	7.9e-14	45.1
WP_026736996.1|347780_348530_+	ATP-binding protein	F7V9D6	Lactobacillus_virus	5.5e-09	27.4
WP_154669363.1|348539_348689_+	hypothetical protein	NA	NA	NA	NA
WP_026736997.1|348678_348900_+	hypothetical protein	NA	NA	NA	NA
WP_026736998.1|348902_349091_+	hypothetical protein	NA	NA	NA	NA
WP_026736999.1|349103_349625_+	dUTP diphosphatase	A0A0E3U2S3	Fusobacterium_phage	7.4e-05	24.7
WP_051411721.1|349629_350379_+	hypothetical protein	A0A2R2ZGJ9	Clostridioides_phage	1.0e-47	42.4
WP_026737000.1|350381_350618_+	hypothetical protein	NA	NA	NA	NA
WP_026737001.1|350631_350829_+	hypothetical protein	NA	NA	NA	NA
WP_051411722.1|350832_351633_+	hypothetical protein	Q4ZBE4	Staphylococcus_virus	1.1e-15	31.7
WP_026737002.1|351625_352093_+	hypothetical protein	NA	NA	NA	NA
WP_026737003.1|352229_352421_+	hypothetical protein	NA	NA	NA	NA
WP_154669364.1|352446_352602_+	hypothetical protein	NA	NA	NA	NA
WP_146966338.1|352909_353080_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0A8WHQ4	Clostridium_phage	7.4e-07	48.2

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_AP019822|778128:789789|DBSCAN-SWA
ACTACAGATTTAATTCTTTTTTTAATGCTTTTTGAAGAACATTTGAAAAATTTATATTATTGTTCATAGCTATTTCATTTAACCAACTTGGAATGGATACATTTTTTCTAACAACCTGTTTTTTAGATTCATTTACATATTTTTTCATATCTAAACTTACTAATGATTTGAAACTTTCACCTTTAATTATAAAATCATTGTCAGTTATTTGAATTTCAGATATATCTGTTGCTTTAGGTATTGCATTACCTTTAACGAAATCATCATAAAGCCATGTACCGATATAATCTTGTGCTGCCTCAACAGCCTCTTCTAATGTTTCACCTTGAGTTGCTCCATTATTTAAATCGGGAAATTCAACGACATAACCACCTTCAATAGCTTTATGAAATATGGCGGGATAAATAACTAACATATAAAATCACCTCTAATTTTAGTTTTGAGGACAAGCAAGATTATTTTTTTAATCCTGCCTGTTTTAAAATAGTCTGTTCCGTGAATTTTTTCAACTCTTTGGAATGAGTGGCTACTTCGGTAATTCTACCATTTGTAGGATTAAAAAAACGTCTGTGTGAGCCTTTACCGCCTTTTATCTCTACAAAACCGTTTTTTAAAAGAAATCGGATCATTTCTTTTGGTTTCATTGGCATTTAACCACCTCAACAGTATTATACATAATATTAAGTATAAAATCAACAAAAAATAAAAAAAGACAATTGAGAAATAGTCAAAAAAATGATATAATTTTATACTAATTTTGTTATTAAATAAATCAAAGCCCGTAAAATAAGATTTATTTATATATGAAGGTGAGAATATTGAATATAACACTGTACAGAAAATACAGACCGCAAAATTTTGATGAGATTGCGGGACAGGAATTTGTAACGAGAGCTATAAAAAATTCATTGAGAGAAGATAAACTTTCTCATGCCTATTTATTTACAGGGCCTAGAGGAGTAGGGAAAACTACTATTGCCAGACTGATTGCCAAAGGAGTAAACTGTCTGAATAACGGTATTACTGATAATCCTTGCGGCGTGTGCGACAACTGTCGCGAAATTGCTCAGGGGATCTCAATGGATATGATTGAAATTGATGCCGCATCAAACAGAGGTATTGATGAAATAAGAGAGCTTAAAGAGAAAATAAATTATCAGCCTGTAAAAGGCAGAAGAAAAATATATATAATAGACGAAGTACATATGCTTACCAAAGAAGCTTTTAATGCCCTTCTGAAAACTTTGGAAGAGCCGCCTGCACATGTAATATTTATATTGGCGACAACGGAAATAGATAAAATACCGGATACGGTAATTTCCCGTTGTCAGAGATATGATTTTTTGCCCATTGACGAAAAAGATATTACGAAATTATTAAAAGAAGTGGCAGAAAAGGAAAATATAACGATAGATGATGAAAGTCTGGATTTGATTTACAGAAAATCCGAAGGAAGTGCAAGGGATAGTTTTTCTATATTTGAGCAGGTTATTTCCAATTTTAACGGAGAAGATATTGATATTTCCAAGACGCAGAAAGCGTTGGGAGTAGTTCCCGATATTGTATTAAACCAGTTTTTGGAGCTTATTCAAAAAGGAAATAAAGAAGAATTACTTGATTTTATGGACAAAATATGGGAAGAAGGTCTTGTTATAGAAACTTTTTTGAAGGATTTTGCTTATTATCTGAAAGAGCAGTTTAAGAAAGACAGAGGATTGTCGATAGATTTTATACTGAATACTGTAAGTTCCATATTTTTTATACTGAATGAATTTAAATATGAAGAAGATAAAAGGCTTTTGGGATATGTTCTTGTACATGAGTTTTATAAAGATAAAGTAAAGAAAACGGTTTATACAGAACAACCTGTGCAAAAATCGGAGTCGATTTCTTCAATTAATCCTGTAATGTCTGATAAAAGCGAAAAAATTTCAGAGAAAAAGTCTGAAAATGTTATTACAGAACAGCAGAATCATGATATTTCATTGTTTGAAAGTAAATGGAAAGAGATAAAAAAGGGGATAAAAAAGGAAAGCGTCATGATAGAAGCATTAATGGCAGACACATATCCTGAAAAACTTGAAGGAAATACTTTGACAATAAGATTTCCCGAGGGTCATAAGTTCCACAGCAGCAGAATTATGGAAACGGAGAATAAGTTAAAAATCGAAAAAATTATAAATAAACTTTGTAATTCGTACATCCTTATAAATACGACTTTCGGAGGAAATGACGGAAACAGTTCCGAAGACGAATTTGTAAATAAAGTAATAGATTTTTTCGAAGGAACAATAATTGATAGTAAATAGTCATATTTAGAAAATTAATATAAAAACGGGAGGCAGAAATGAAAGTAAAAGTAATATTAAAAGAAAATATAAAAGGTGTAGGGAAAAAAGACGAGATAGTGGAAGTGAAAGACGGATATGCAAATAACTTTTTATTTGCTCAAAATAAGGGAATACCTGCAACACCTGAAAATATAAATAAATTGAAAAGTAAAAATGAAAAGATAAAAAAGACTCACGATAATGATGTGAAAAAAGCCAATGAATTAAAAGAACTGTTAAGTTCAAAAGAAATACTGTTAAAAGTAAAAGCGGGAAATAACGGAAAAGTATTCGGTTCGGTAGGAGGAAAAGAAATAGCCGATGCCATAAAAGAGCAGTTAAATCTTGAAGTGGATAAAAAGAAAGTGTCTACAGATGCTAGAATGAAAGAATTGGGAGAACACTTTATAGAAATAAAATTACATCCTGAAGTAAAAGCCGTTATAAAAGTAAAATTGGAAGGACAGGAATAAAAAATCATGGCATTATTTGATGAAAGTAAAAGTGAAAATGATTTAAAAATACCTTACAGTATTGAGGCTGAAGAGGCATTGTTAGGTTCGATTTTTATAAAGCCGGACGTTATCGGAGATATTGTGGAAATTATAACGCCGAATGATTTTTATAAAAACAATTATCGGATAATATTCGGTGAAATGCTGAATGTTTACAATACAGGAAAAATCGTAGATGCTCTTGTAATCAAGGATTCTCTTGAATATCAGAATTTGCTTGACGAAATAGGCGGAGAAGATATACTTTACGGATTGACTGATGTAGTGCCTACCGCTGCAAATGCTGTAACTTATGCTCAAATTATTAAAGAACGTTCGGTTCAGCGACAACTGATAGAAACAGGAGAAAGAATCACGAGAATGGCTTATCGGGGCTATGATGATGTGGAAAAAATGCTCGATAAAGCTGAAAGTATGATATTTAAAATCGCCGAGTCAAAACAGAAAAAAGATGTAGTTTCTTTAAAGGAACTGGCAGGATTGAAAATTTCCAGTTTGGATGAAATGTCTAAATATAAAGGCGGATTGAGAGGATTAAGTTCGGGATTTACCGATTATGATTCTCTTACAAGCGGATTTCACGGCTCAGATCTGATAATACTCGCAGCCAGACCTGCTATGGGGAAAACGGCTTTTGCCCTGAATTTGGCATTGAATGTGGCAAAAAGAGGGAAACACGTATTGATATTCAGTCTGGAAATGGGAAATGAGCAGCTTTTTGAAAGACTTCTTTCCATAGACTCAAAAATAAAGTTAAAGTCTATAAAAGACGGAACTTTAGCCGATGATGACTATACTCTTTTGGGAAACAGCATGGGTAGACTGTCGGAGTTGCCTTTATATATTTCGGATTCGTCAAGTGTGAATATACTTGAGATAAAGGCAGTAGCAAGAAGATTGAAAGCCGAAGGAAAACTTGATTTTCTGTTGATTGACTATTTGCAGTTAATAACCCCTTCAGAAGGCTCTAAAAAGAGCAGAGAACAGGAAATCTCGGAAATTTCCAGATCACTTAAAATTATTGCCAAAGAACTGGATATACCTGTTATAACATTATCACAATTATCGAGGGGTGTAGAGTCGAGAAATGATAAAAGACCTATACTTTCAGACTTAAGAGAATCGGGAGCCATAGAACAGGATGCCGATATGGTAATGTTCCTGTATAGAGAGGCTTATTATGCGTCAAAAGTCGGAATGCAGCCGAACGGTCAAAATCCTAATGAGTCGAATATGCCTCAGCAGTATACAAGCCAACCGACAGTAAGTTCTACACCTGAACTGGAAGAAGTAGAAGTAATAATAGGAAAACACAGAAGCGGACCTACAGGTACGATAAGATTGGGATTCAGACCGAGTTATCAGCAATTTGTAAATATAATAAGCGATGCCCGTGTAAATCAGTATCCTGAATAAAATTTTAAATCTGTATACAAAAAATTGTATAAATAATTAATTAATATAAACTCAAGGAGGGAAAATGCAGCAAAAAAGAAAAGTTGAGTTACTTGCACCTGCGGGTAATATGGAAAAACTCAAAACAGCTTTTCATTTCGGAGCAGATGCCTGCTTTGTCGGCGGCAGTGCTTTTAATTTAAGAGGAATGTCCTCGAATTTTAAAAATAGCGAATTAAGACAAGCTATAGATTATGTTCACAGTTTAGGAAAAAAAATATTCGTAACATTGAATATATTTGCACATAACTCGGAAATAGAATATATGCCGAGATTTATAAAGTTACTTGATGAATATGGAGCCGATGCGGTAATAGTAGCTGATTTGGGAGTGTTTCAGCTTGTAAGAGAACACGCTCCGAATTTACCTATTCACGTGAGTACACAGGCGAATAATGTCAACTGGATGAGTGTAAAAACATGGAGAGATATGGGGGCTAAAAGAGTAATTTTGGCAAGGGAAATGTCTTTAAAGGAAATAAAGACTATTAAAGAGAAAGTTCCTGATGTGGAAATAGAAGTCTTTATACACGGTGCAATGTGTATGGCTATTTCGGGAAGATGTCTTTTAAGTAATTATTTTACTTCACGTGATGCCAACAGAGGTATATGTGCACAGGATTGCAGATGGAATTATAAAGTAATCGCAGAAGGGCATGAGGAAACAGGAGCTCACGATATTATCGAAGAGCACGGAAGTACGTTTATCTTTAATGCGAAAGACTTATGTACTATAGAATTTATAGATAAAGTCCTTGAAACTGGAGTAGATTCCTTAAAAATAGAAGGAAGAATGAAAAGTATCTATTACAATTCCACAGTAGTAAAACAATACAGACAGGCTCTCGACTCATATTATTCGGGGAATTACAAATATGATCCGAAATGGTTGTACGAGCTTCAAACTATAAGTCACAGACTTTATTCCAAAGGATTTTATCTCGGAGTAACTACTGAAGAGGATCAGAACTATAATACAGGTTCGTCTTACAGTCAGACTTATCAGCTTGTAGCCAAAGTAGCTGAAAAACTGGATGATAACAAATATGTGTGGCAAATAAGAAACCGTGTTTTTGCAAGTAATGAACTGGAATTGGTGAGACCTCATCAGGATCCTGTGAAGTTTAAAATAAAGAATTTTTTGAATACAAAAAATAATGAATACATAGATGTTGCTCATCCGAATACTGTAGCAATAATAGAAACTGATGTAGAAATGGAGCCGATGGATCTGATAAGGGTAAAACTTCCCGAAGGAAAGTCGGACAGTGACATGGAAATGGGAGAAAATACCCTTTAAAGTGAATTTTATAAAGAATTTAAGTTTTTTCAAAGTTAATCTAAAAATAAATCAAAGCCTCATAACATATACTCTAAGTTGAAGAGGTAAATACACGATTTTTAAATAGTAGAGTGTTAGACTCTACTATTTTTTCATAAAGTGTAGTATAATAAAAAAAATATAAAATAAGTTGGTGATATGATGAGAGAGAAAATATTAGTAATTGAAGATGATCCTAAGATTTCAAGATTATTGGAAATCGAATTAAAATTTGAAGGATTTGACGTATTTTTCGCTTATGACGGAAAAGAAGGTCTTAACATGGCAAAATACGGTTCATATGATTTGATTTTGCTTGATGTAATGCTGCCTAAAATGAGCGGAATGGAAGTTTGTAAAAGAATAAGAGAAGGTTCTCAGGTACCTATTATTATGCTTACTGCTAAAGATGAGATAAGTGATAAAATAGTTGGATTTGACTACGGTGCAGATGATTATATGACAAAACCGTTCTCAAATGAAGAACTTCTTGCGAGAATAAAAGCACTTTTGAGAAGAACGAAAAAAACAGTAGATCATAAAGGAATATTTGAATTTGAAGATTTAAAAATTAATTATTCTACATACGAAGTATTCAGAGGAGAAACTTTGATATCTCTTTCCAAAAGAGAATTTGAATTATTGGATTTCCTTGTGTTAAATAAAGGAATAGTTTTATCGAGAGATAAAATACTGGAAGAAGTTTGGGGATTTGACTATATAGGAAATGACAACATCCTGGACTTGTATATCAAGTACTTGAGAGATAAGGTAGATAAACCTTATGAAAGAAAATTTATCCAAACTGTAAGAGGAATAGGATTCATTTTTAAATAAGGAGATAACCTATGAAAAAAGTAAAATTAGAAGATCGTATTTCAATAAGTTACGTTCTTCTATTTTTAGCATTAATACTGATTTCCAATTTTGTGCTGGTTTATATCTTGAAAAAAGAGAATACAAAATCGATTCAAATGGCGGCTACAGCTAAAGAGGAAGAACTTAATGAATATCTGGATAAGTGGGAGATTTATTCGAGATCAGATCAGTTCCAGTGGGAATCTCCTGCAGGACAACTTCAGGGAGAAAGAATTGTATATCTCAGAAAACCTTTTAATCCCGGAGATAACGAATATCTCTATTTGATGCAGGTAAGCTCTGAAGATTCAAGGCAGATTCTTATAAACAGTATAACTCCTGTAGAAATACTGGAAACAGGTATTGACAGAGAAAATATGGTAACCAAAGGAAAAGAAATTATAGATGTTGTTGAGAAAAATAATATCAAGGATAATAGCATTAAAGGAAAAGATATTAAACTCGAAGATAAAACCTCGGAAAATGAGAAGACTAACGATATTTATCATGTGTTTAAAGTCAGCAGAACAATAAAATCAAGAGCAAGAGATTATAAAGTCGAGATTTATGTGCTGAAAAACATAAGTCAGGAAACGAAAATATACAGTCGTCTTCAATGGCTGATAGTACTGTTTTCATTAATCGGAGTAATCGTAACTGTGCTTGTATCGAGCTTTTTAAGTAAAAGAATCTTAAGACCGGTAAACAGTATAATAAAAACTGCAAAAACGATTAATACCGATGATTTGAGTAAAAGAATAGACGTTCCGAAAACCGAAGATGAACTTCAGAATCTGACACTGATAATAAATGAAATGCTTGACAGACTTGAGTTTTCCTTTGATAATCAGTCAAAATTCGTGTCGGATGCTTCTCATGAGTTGAGAACACCTTTGGCAATAATAAAAGGATATGCCGAGATTATAAAGAAAAGAAGGCTTACTGATGAAGAGATCTTTGAAGAGTCGATAGACTCTATAATTAATGAAGCGGAAAATATGAAAAGTCTGGTTCAGAAACTTCTTTTCCTTGCAAAAGGTGAAATTACAAAAATAAATACGAATTTCAGTGAAATAGACGCAGGAGAACTGGTTCATCAGATATATACAGATACTGTAGTTTCAGTAAAAGATCATGTATTCAATCTTGAAAAATCCGAAGAATACAAAATTAAAGCCGATACGACATTGTTACAGCAGGCAATAAGAGCATTAATAGAAAATGCGACAAAATATTCGGATAAAAATACTAATATATATCTTATTTCCCAAAAAGAGGGAGATTTCGGAAGGATAACCGTAAAAGATGAAGGCGTGGGAATGACTCCCGAAGACTCCAAAAGAGTATTTGAAAGATTTTACCGTGTGGATGTGTCGAGAACTAAAGCTACAGGAGGTACGGGACTCGGTCTTGCTATTGTAAAAAGAATAGTGGAAATACATAACGGTAAAATAGAAGTAAATTCGGAACTCGGTAAAGGAACGGAAATATCGATTATATTACCTTTAGTAAAGGAAAAAACCGAAGAAAAACCGAAAAGCGGTAAATCAATATTAAAAATAGGAAATAATAAAAATAAATAAAAATGTAAAAAAATATCGGGAGGAAAAATGGCAAGAAAATATTTCGGAACTGACGGAATGCGTGGAGAAGCAAATAAAGATTTAACAATTGAGCTTGTTACAAATTTAGGACTGGCATTGGGATATTATTTGAAAAAAAATAAAGAAGGTACTGTAAAGCCTAAGATTATTCTCGGTACAGACACAAGAATATCGGGATATATGATAAGATCAGCATTGTCTGCGGGACTTACTTCTATGGGAGTTCATATAGATTTTGTAGGAGTTTTGCCTACTCCGGGAGTTTCTTATTTGACAAGAAAATTAAATGCCGATGCCGGAATAATGATATCTGCATCACATAATCCTGTAAAAGATAACGGAATAAAAATTTTCAGCCAAAACGGATATAAATTACCTGACAGTGTAGAAGAAGAATTGGAAACACTTATGGAAAATACTGACGAGCTTTTGAAGCATCAGGTTTCAGGTGATGATTTGGGAAGATTCAAATATGTTGAAGACGATATGAGAATATATTTGGACTTTTTGAGTTCAACAGTGAAAAAAAGTTTTAAAGGTACAAAAATTGTCATTGATGCGGCAAACGGTGCTGCTTACAGAGTTGCATCGAAAATCTTCCAAAGACTTGGTGCCGATATAATAGTTATAAATAACATACCTAACGGTAAAAATATAAATGTAGACTGCGGTTCTACTCATCCTGAATTGTTGCAGGAGATAGTACAGGTTTATAAAGCCGATTTGGGACTCGCTTATGACGGAGATGCCGATAGACTCATAGCTGTAGACCATACAGGAAAAATAATAGACGGAGACCTTATAATCGGAATAATTGCCAAAAACTTTAAAAGTAAAGGGCTTTTAAATAACAATAAAGTGGTAACTACGGTTTTGAGTAATATGGGATTTGAGAAATATCTGGAAGAAAACGGAATAGGCTTGATAAGAGCCAACGTAGGAGACAGATATGTTCTTGAAAAAATGAAAGAATTCGGATTAAATCTTGGAGGAGAACAGTCAGGGCACATTTTAATGCTTGATTACAATACTACAGGAGATGGAGTGCTATCGTCTATTCAGCTTGTTTCGGCAATGATAGAAAGCGGAAAAACATTGAGTGAACTCGTAAAAGATATAAAATTATGGCCTCAGGATATGAAAAATATTACAGTTTCCAAAGAGAAAAAAGCCGATTGGAAAAATAATAAGGCATTGACAGAGTTTATTAAAGAAAAAGAACAGGAAATAAACGGAAAAGGTCGTATACTTGTCAGAGCATCGGGAACAGAACCTTTAATAAGAGTTATGGTTGAAGCGGAAACTGAAGAAATAGTCGATAAATATGTAAATGAATTGGTAAATAAAGTTAAAGAAGAATTATTATAATTAAAAAGATAAAACAGGAGGGATGTATGCTTAATGAAATTTACGAATTTTTTCTTAAAGTGTCTGAAATGGGAAGTATTTCCAAAGCTGCGGATAAATTATATATTTCCCAACCTGCTTTATCTCAGCAATTAAAAAATCTTGAAAAAGAACTTGATGCTTCTTTATTTATAAGAAGTAATAAGGGAATAGAATTAACCGGAGAAGGGAAAATCGTTTACAAATACTTTTCCATGTCGGAAAAACTTTTGCAGGAGATGAAAAAAGAAATAAGGGATAAGAAAAATAATGTAAAAAAGATAAGGATTTCTGCGGTCCCTACAATGTGTAATTATTCGCTGCCTTGTATGATTTATCATTTGAAGCAGCACTATCCTAATACATCGGTAGAGCTTTACAGCAGAAGTGACAGCTTTAAAATCGAAGAGGAGCTGGTAAGCGAAAGATGTGATATAGGCTTTGTTGCCGAAGACATTAAAAATGATCTTGTTCTTACAAGTAAAAAAATATTTGAAGAAGAAATTTTGCTTGTCGCTTCAAATATATCTATCAATTATCCCGATTTTATAACTGAAAGGGAATTAAGCCGATATGACTTGATAAATATGGCTACTGAAAACGAAATTACAAGAACAGTTTCCAGATATATAAATGATTTTGAAAGTTATAAAATTACATATAATCTTGAAAGCATAGATGCAATAAAGTCTTGTGTGGTAAACGGCTATGGATTGGCTTTTTTGCCTTATTCTACAATAAAAAAGGAACTTTATAATAAAGAAATGAAAATTATTAATATTGATAATTTGTCAATCGTTCAAAATATCAGTTTGGTAAAAAGAGTTTCGGAAACTGACGGATTGAAAAAAATTATTTCCTATATAGAAAAGCATGTTTCCAAATTTATTTAGAAACAGTAATTTCCCACACACCTTTAAGAACTTCTTCGGATTTATATTCAAGGTTATTTAAAGAACAGTAATATTCAATATTTTGGACTGCCAGATTGTGATCGGTTACGAGAAGAATTTTTTTTCCGCTCATGATCAGAGGATATTTTTCTCTCAGCATTATTACTGGCAAGGGACAATTATAACCCATACAGTTTATTTTAATCATAAAAATTTCCTTTCATAAATAGAAGACTATTCGATAATCTGTTAATAAAGTTATTATACAACAGAATATTCAAATAGTCTATATAAATACACAGAATATCTCCTGATAATACAGGAGATATTTTTAAATACTTAATAACGAAATCTGTTATTCCGATTCGCTGATATATTTTTCTGCATAATAAGCAGCAACAGCACCGTCACCGACAGCAGTAGTGACTTGTCTTAAAGGCTTATCCCGAACATCTCCTGCACAAAATACACCATTTATATTTGTTTCCATTTTTTCATTTGTTATTATATATCCGCCCGAATTCATATTTACAGAGTTTTTAAAAATTTCCGTATCGGGATTATATCCGATAAAAAGAAAACATGTATCTATATTAAAAGGTATCAATTCTTCGGTTTTCGTATTTTTCAATATAACTTTTTCCAATAATTCGCCCTCGCTCTCAAAAGAATGTACACATGTATTCCATATAAATTCCATTTTTCTATTGTTGAGAGCCTGTTCTCTTGCGGCTTTATGACATTTCAGATTTCCTGTATCACGAGTTACCGAAACGATGACCTTTTTAGCAAATTTAGTTAAAAAAATTCCTTCTTCAATAGCCGAATCACCATTTCCGACAACCATGACAGTTTTATCAATATTTGCAGCTGCATCACATGTAGCACAAAAAGAAATCCCTTTTCCGTATAAAAATTTCTCTTCATTGAGTGAATTTGTCAGTTTGGGGTTTCCGCCTGTCGCGATTATTACAGCTTTAGCTTCATATATATTTCTGAAAGTTTCAATAACTTTTTTCTCGTTACTTAAACTGACAGATTTTACAGGAACTTGTTTAAATTTAACTCCGAATTTTTTAGCCTGTTTATGAAATAGATTCATTAAATCAAGTCCTGTAATTCCTTCGGGAAAACCGGGATAATTTTCTATCTCGTTTGTATATGTTGCCAAACCTCCGATTAGAGATTTTTCGAGAATAAGAGTATTCAGTTTGGACCGTCCGCAGTAAATTCCGGCAGTAAGTCCGGCACTTCCTCCGCCTATAATTATAACATCGTAAAATTCTTTTATTTTTTCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_AP019822|778128:789789|788481_788697_-|WP_026737334.1|DBSCAN-SWA
MIKINCMGYNCPLPVIMLREKYPLIMSGKKILLVTDHNLAVQNIEYYCSLNNLEYKSEEVLKGVWEITVSK
>NZ_AP019822|778128:789789|778930_780436_+|WP_051411738.1|DBSCAN-SWA
MKVRILNITLYRKYRPQNFDEIAGQEFVTRAIKNSLREDKLSHAYLFTGPRGVGKTTIARLIAKGVNCLNNGITDNPCGVCDNCREIAQGISMDMIEIDAASNRGIDEIRELKEKINYQPVKGRRKIYIIDEVHMLTKEAFNALLKTLEEPPAHVIFILATTEIDKIPDTVISRCQRYDFLPIDEKDITKLLKEVAEKENITIDDESLDLIYRKSEGSARDSFSIFEQVISNFNGEDIDISKTQKALGVVPDIVLNQFLELIQKGNKEELLDFMDKIWEEGLVIETFLKDFAYYLKEQFKKDRGLSIDFILNTVSSIFFILNEFKYEEDKRLLGYVLVHEFYKDKVKKTVYTEQPVQKSESISSINPVMSDKSEKISEKKSENVITEQQNHDISLFESKWKEIKKGIKKESVMIEALMADTYPEKLEGNTLTIRFPEGHKFHSSRIMETENKLKIEKIINKLCNSYILINTTFGGNDGNSSEDEFVNKVIDFFEGTIIDSK
>NZ_AP019822|778128:789789|783907_784585_+|WP_172966387.1|DBSCAN-SWA
MMREKILVIEDDPKISRLLEIELKFEGFDVFFAYDGKEGLNMAKYGSYDLILLDVMLPKMSGMEVCKRIREGSQVPIIMLTAKDEISDKIVGFDYGADDYMTKPFSNEELLARIKALLRRTKKTVDHKGIFEFEDLKINYSTYEVFRGETLISLSKREFELLDFLVLNKGIVLSRDKILEEVWGFDYIGNDNILDLYIKYLRDKVDKPYERKFIQTVRGIGFIFK
>NZ_AP019822|778128:789789|787604_788489_+|WP_006807427.1|DBSCAN-SWA
MLNEIYEFFLKVSEMGSISKAADKLYISQPALSQQLKNLEKELDASLFIRSNKGIELTGEGKIVYKYFSMSEKLLQEMKKEIRDKKNNVKKIRISAVPTMCNYSLPCMIYHLKQHYPNTSVELYSRSDSFKIEEELVSERCDIGFVAEDIKNDLVLTSKKIFEEEILLVASNISINYPDFITERELSRYDLINMATENEITRTVSRYINDFESYKITYNLESIDAIKSCVVNGYGLAFLPYSTIKKELYNKEMKIINIDNLSIVQNISLVKRVSETDGLKKIISYIEKHVSKFI
>NZ_AP019822|778128:789789|786216_787578_+|WP_026737333.1|DBSCAN-SWA
MARKYFGTDGMRGEANKDLTIELVTNLGLALGYYLKKNKEGTVKPKIILGTDTRISGYMIRSALSAGLTSMGVHIDFVGVLPTPGVSYLTRKLNADAGIMISASHNPVKDNGIKIFSQNGYKLPDSVEEELETLMENTDELLKHQVSGDDLGRFKYVEDDMRIYLDFLSSTVKKSFKGTKIVIDAANGAAYRVASKIFQRLGADIIVINNIPNGKNINVDCGSTHPELLQEIVQVYKADLGLAYDGDADRLIAVDHTGKIIDGDLIIGIIAKNFKSKGLLNNNKVVTTVLSNMGFEKYLEENGIGLIRANVGDRYVLEKMKEFGLNLGGEQSGHILMLDYNTTGDGVLSSIQLVSAMIESGKTLSELVKDIKLWPQDMKNITVSKEKKADWKNNKALTEFIKEKEQEINGKGRILVRASGTEPLIRVMVEAETEEIVDKYVNELVNKVKEELL
>NZ_AP019822|778128:789789|780936_782388_+|WP_026737331.1|DBSCAN-SWA
MALFDESKSENDLKIPYSIEAEEALLGSIFIKPDVIGDIVEIITPNDFYKNNYRIIFGEMLNVYNTGKIVDALVIKDSLEYQNLLDEIGGEDILYGLTDVVPTAANAVTYAQIIKERSVQRQLIETGERITRMAYRGYDDVEKMLDKAESMIFKIAESKQKKDVVSLKELAGLKISSLDEMSKYKGGLRGLSSGFTDYDSLTSGFHGSDLIILAARPAMGKTAFALNLALNVAKRGKHVLIFSLEMGNEQLFERLLSIDSKIKLKSIKDGTLADDDYTLLGNSMGRLSELPLYISDSSSVNILEIKAVARRLKAEGKLDFLLIDYLQLITPSEGSKKSREQEISEISRSLKIIAKELDIPVITLSQLSRGVESRNDKRPILSDLRESGAIEQDADMVMFLYREAYYASKVGMQPNGQNPNESNMPQQYTSQPTVSSTPELEEVEVIIGKHRSGPTGTIRLGFRPSYQQFVNIISDARVNQYPE
>NZ_AP019822|778128:789789|782452_783727_+|WP_026737332.1|DBSCAN-SWA
MQQKRKVELLAPAGNMEKLKTAFHFGADACFVGGSAFNLRGMSSNFKNSELRQAIDYVHSLGKKIFVTLNIFAHNSEIEYMPRFIKLLDEYGADAVIVADLGVFQLVREHAPNLPIHVSTQANNVNWMSVKTWRDMGAKRVILAREMSLKEIKTIKEKVPDVEIEVFIHGAMCMAISGRCLLSNYFTSRDANRGICAQDCRWNYKVIAEGHEETGAHDIIEEHGSTFIFNAKDLCTIEFIDKVLETGVDSLKIEGRMKSIYYNSTVVKQYRQALDSYYSGNYKYDPKWLYELQTISHRLYSKGFYLGVTTEEDQNYNTGSSYSQTYQLVAKVAEKLDDNKYVWQIRNRVFASNELELVRPHQDPVKFKIKNFLNTKNNEYIDVAHPNTVAIIETDVEMEPMDLIRVKLPEGKSDSDMEMGENTL
>NZ_AP019822|778128:789789|780474_780930_+|WP_006807522.1|DBSCAN-SWA
MKVKVILKENIKGVGKKDEIVEVKDGYANNFLFAQNKGIPATPENINKLKSKNEKIKKTHDNDVKKANELKELLSSKEILLKVKAGNNGKVFGSVGGKEIADAIKEQLNLEVDKKKVSTDARMKELGEHFIEIKLHPEVKAVIKVKLEGQE
>NZ_AP019822|778128:789789|778128_778542_-|WP_026737328.1|DBSCAN-SWA
MLVIYPAIFHKAIEGGYVVEFPDLNNGATQGETLEEAVEAAQDYIGTWLYDDFVKGNAIPKATDISEIQITDNDFIIKGESFKSLVSLDMKKYVNESKKQVVRKNVSIPSWLNEIAMNNNINFSNVLQKALKKELNL
>NZ_AP019822|778128:789789|784596_786189_+|WP_006807481.1|DBSCAN-SWA
MKKVKLEDRISISYVLLFLALILISNFVLVYILKKENTKSIQMAATAKEEELNEYLDKWEIYSRSDQFQWESPAGQLQGERIVYLRKPFNPGDNEYLYLMQVSSEDSRQILINSITPVEILETGIDRENMVTKGKEIIDVVEKNNIKDNSIKGKDIKLEDKTSENEKTNDIYHVFKVSRTIKSRARDYKVEIYVLKNISQETKIYSRLQWLIVLFSLIGVIVTVLVSSFLSKRILRPVNSIIKTAKTINTDDLSKRIDVPKTEDELQNLTLIINEMLDRLEFSFDNQSKFVSDASHELRTPLAIIKGYAEIIKKRRLTDEEIFEESIDSIINEAENMKSLVQKLLFLAKGEITKINTNFSEIDAGELVHQIYTDTVVSVKDHVFNLEKSEEYKIKADTTLLQQAIRALIENATKYSDKNTNIYLISQKEGDFGRITVKDEGVGMTPEDSKRVFERFYRVDVSRTKATGGTGLGLAIVKRIVEIHNGKIEVNSELGKGTEISIILPLVKEKTEEKPKSGKSILKIGNNKNK
>NZ_AP019822|778128:789789|778582_778777_-|WP_026737329.1|DBSCAN-SWA
MPMKPKEMIRFLLKNGFVEIKGGKGSHRRFFNPTNGRITEVATHSKELKKFTEQTILKQAGLKK
>NZ_AP019822|778128:789789|788844_789789_-|WP_026737335.1|DBSCAN-SWA
MEKIKEFYDVIIIGGGSAGLTAGIYCGRSKLNTLILEKSLIGGLATYTNEIENYPGFPEGITGLDLMNLFHKQAKKFGVKFKQVPVKSVSLSNEKKVIETFRNIYEAKAVIIATGGNPKLTNSLNEEKFLYGKGISFCATCDAAANIDKTVMVVGNGDSAIEEGIFLTKFAKKVIVSVTRDTGNLKCHKAAREQALNNRKMEFIWNTCVHSFESEGELLEKVILKNTKTEELIPFNIDTCFLFIGYNPDTEIFKNSVNMNSGGYIITNEKMETNINGVFCAGDVRDKPLRQVTTAVGDGAVAAYYAEKYISESE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026737328.1|778128_778542_-	type II toxin-antitoxin system HicB family antitoxin	A0A0C5AEN7	Bacteriophage	7.4e-16	36.7
WP_026737329.1|778582_778777_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_051411738.1|778930_780436_+	DNA polymerase III subunit gamma/tau	A0A1L2BWV7	Bacteriophage	1.2e-47	37.1
WP_006807522.1|780474_780930_+	50S ribosomal protein L9	NA	NA	NA	NA
WP_026737331.1|780936_782388_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.6e-89	42.3
WP_026737332.1|782452_783727_+	U32 family peptidase	Q6DW11	Phage_TP	2.0e-56	38.3
WP_172966387.1|783907_784585_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.5e-45	40.4
WP_006807481.1|784596_786189_+	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	3.2e-27	29.7
WP_026737333.1|786216_787578_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_006807427.1|787604_788489_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	1.2e-07	31.1
WP_026737334.1|788481_788697_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_026737335.1|788844_789789_-	FAD-dependent oxidoreductase	A0A2K9L162	Tupanvirus	7.2e-59	41.7

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_AP019822|954694:966505|DBSCAN-SWA
ATTACATATTAAAATACTTAGCAAACGGTTGTGAAAAGACGATAGCACTGACAGAAGCCTCAGGATACATCATATGTCCTAAAGTCAGTTTGATTCCAAAACGTTCAGGTTTTAAAAGATTAAACAGTTTATCCTGGTCCGATAAATCAGGACAGGCAGGATAACCGAAAGAATAACGTTTTCCGTGATATTTTGCTCTATGAATTTCATCGATAGTTAAATTTTCATCGTCAATTATTCCGACATCTTTTCTCATCAGATAGTGTGCATATTCAGCAGTAGATTCTGCAAGTTCCAATCCTATAGAATTTACAAGATGACCTTTATAAAATTCTCCTTTTTCTTTCAGTTCATTGGAAACTATTCTGGATTTTTCTCCTGCACTGACTACAAACATTCCGATGTAATCTATTTCTGCAGGATGAATATAGTCATTAAGGGATAAATGCTGTCCCCATGTTTGTCTCGGGAAATCGAAAGTTTCAATAACTTCTTTCAAATCGTCTGACAGGATTTCTATTTTTCCGTCTTTTTTTCGACAAGGAAAATATTTATAAATAGCTTTAATGTCAAAATATTCATCTCCATGATTTATAATATCCAAAATCTCGTTATACATCTTTGTTGCTTTGGGATCTCCTTTTTCAAGCAGCTCTCTGGCAACCCATTTCATTCCGAGATGCTTTCCTATAAGCATTTGAAGATTTAAGTATTTAAAAACTTCTTTTGCTGATATATTTGTGATAATCTGCTTATTTAACGTAGAAGGTTTGTATATCTTTTCAAAATTATATTCAGGAAGTTTTACTTTTGTTATATCAAAACTTCCGTCTGCATTTTTTACATCTCCCACTGTCTGACGTACATTGAGTTTTTCAATAGCATCTTTATCTTTTAACAGAAGCATATCTCTTCTTGACTGTAAATATTGCTTAAATTCTTCAAATTTCTCAGGAACAATCATTTTGTTCAAATCGGCTAATGCAGTCATAGCATCTTTGGAATAAATAACAATATTATTTTCGTAAGAAGGCTCTATTTTATTCACCGTGAACTTTTCTGTAAGAGCAGCTCCTCCTACAAATATCGGTATTTTAATTCCTGCCTCTCTCAAGACGGCTACAGTGTTTACCATTTCAGTGGCAGATTTTACTAAAAGACCTGAAAGACCTACAAAATCAGCCTTTTCATTTATAATAGCTTCTCTTATTTTTTCAGCAGGAGTGTTTATACCTAAATCGACTACATCGTAACCGTTATTTCCGATTATAATTCCTACGAGATTTTTCCCTATATCGTGAACATCTCCTTTAACAGTTGCCATTATGACTTTACCTTTTGTGGAAGGCTCGGATTTTTCCATAAACTGTTCCAAATGAGAAACCGATGCTTTCATGACTTCGGCACTTTGAAGAACTTCGGCAACGATTAAGTCATTGTTATTGAACAATTTACCGACTTCGTCCATTCCGTCCATTAAAGGACCGTTTATAATGTCCAAAGGAGAATATTTCTGCAGCAATGTGTCAAGCAAAGGGATCAAGTCTTTTTTACTTCCTTCGACTACAAGATTGGAAACCTGTTCTTCAGGAGTCATATTAGTTGTATCGGCTTTCTTTTCCACGCCTTTTTTCTCCCTGTAAAATGCCACAAAATCTGCAACAGTATCATCGTTTGTGTTAAATAACAGGGCTTCGGACAATTCTTTTTCCTTATCGGAAATTTCCGAAAGGGGAATAAGTTTTTCAGTATTGACAATAGCATAATCAAGTCCCGTTTCGTAGGCTTTCTCCATATAGTAGCTGTTCAGAACTTCTCTTCCCGCAACAGGCAGCCCGAAAGAAATATTACTTACTCCTAATATAGTTTTTACATTAGGCATTTCTTTTTTGATTTCTCTTATGGCTTCAATAGTTGCAGAAGCAGAGCCTATATATTTCTGATCTCCTGTAGCGACAGGAAAGACCAAAGTATCAAAAACTATATCTCTTTCATCAATTCCGTATTTTTTTGTCAGCAATTCATGGCTTCTTTTGGCAACTTTTATTTTCTTTTCAAGAGAAACAGCCATTCCCTCTTCATCAATTAATCCGACAACAACCGAAGCACCGAATTTTTTTATTAATTTTGACATATCGTCGAATTTTTTTTCGCCGTCTTCAAGGTTGATCGAATTTATTATACCTTTCCCCTGTAAATAAGTAAGCCCTTCTTTTATAACATTTATATCCGTAGAATCAAGCATTATAGGAACTTTTGCAAATTTTGAGACTTTTTCAAGAAAAGTCTTCATATCACTTATTTCATCTCTGTCAGGATTTGCAAGACACACGTCGATTACATCGGCATCTCCTTTTATTTGGAGCCTTGCCACTTCCGTAGCTTCATCAAATTTTTCGTTTACTATAAGATTTTTAAATATACGTGAACCTATTACATTTGTTCTTTCTCCTACGTATATTGGTCTATCCTGTGGAGGGTTCAGCGTAATAAGTCCGCTTACTTCATTTTTTGTTTCGCTGTGTTCTTCAATGATTCTCGGTGTATATTTTATACTTTTTTCTTTTATCTGTTTAATATGTTCGGGAGTAGTACCGCAACATCCTCCGACAATATTCAGGTATTTATTTTGAAAAAAAGGTTCTATTTTTGCAGACAATGTATCCGGAGTTTCCTCATATTTTCCTTCTTCATTGGGAAGTCCTGCATTAGGATACACGGAAATATAAGTGTTTGAAACATTATTTAATATTTTTAAAAACTGAGTCATAAATTCCGGTCCTGTGGCACAGTTAAGACCTACAGAAAGAGGATGCATATGATTTACCGCATAGTAAAATGCGTCTGCTGTCTGTCCTGCAAGAGTAGTTCCCGTACTTTCAATAGTAAATGAGAGCATTAAAGGTACATGATAATATTCCTCCATAGCTTTTTGAAGTCCTAAATAAGCGGCTTTCAAGTTTCTCGTATCCTGTATGGTTTCAAACAGTATTATATCCACATTGCCGGCAAGAAGTCCCGAAGTAGCAGTATAATAAGTGTGTATAAGCTCATCAAAAGTTACTCCGCCCGTAACACTTATGGATTTATTTGACGGACCCAATGCTCCCGCCACATACAGATTTCTTTGTTCATCGGGATTTTCTTTTCTGTATTCTTCAATAGCTTTTCTCACAAGCCCTGCAGCGGCTTTATTCATCTCGAAAACTTTATCTTCCAGATCGTAATCTCTTAAAACAATATCCAATGCTCCGAAAGTGTTTGTTTCAATAATATCACTTCCGGATTCAAGGTACATTTTATGTATGTTTTTAATGACATCAGGCTTGGTAAGTACAAGATAATCATTACATCCTTCGTATTTTTCTCCCCCGAAATCTTCAGCAGTCAGATTCTGCTTTTGTATCATTGTCCCCATTGCTCCGTCTAAAAGGACGATTTTATCATTCAGATCTTTTTTTAGTTCGTAAAATGAATCTTTATATTTTATATTGTTAGGCATTAGTTATTTCCCTTCATCTTAGTATAAATCAAGTTTTATTATTTTATCATAAATCTTATAGTATGTATATACAAAAGTTTGTATTTAATTATAGAAAATATAAATATACTGATAAATGATTATTATGTTTTAAGAAAATTTTCTATATGTTTTTAACAGTTCGAGGCAAATATTTTATACTTTTTTCTTTTATCTGTTTAATATGTTCGGGAGTAGTACCGCAACATCCTCCGACAATATTCAGACAGCTGTTTTTGAAAAGAAACTCTATTTCCGATGCGAGTATGTCGGGAGTTTTTCCATACTTGCCGTTTTTATCGGGAAGCCCTGCATTCGGGTAAAATGAAGTATAAACATTTGAAATATTATTTAATGTTTTTATAAATTTTCCGAAAAATTCTCCGCCTACGGCACAGTTAAATCCTATGGAAAGGGGGTTCATGCTGCATGCTGTATTATAAATCTCATGTATAGTCTGTCCTGCGAAAGTAGTGCCGGTATTTTTAAGAGTAAATGAAAGCATTAAAGGCACATAATAATATTCTTTCATAGCTTTTTGAATCCCCAAATAAGCAGCTTTCAGACTTTCCGTGTCAAGTATAGTTTCAAGCAGAATAATATCAACGTTCCCGGCAAGGAGTCCCGAAACAGAAACATAATAAGCATGGGCAAGTTCCTCAAAAGTTATATTGCCTGAACTTAAAGATTTATTTGACGGTCCCGATGCTCCTGCAACATAAAGATTTCGCTTTTCATCGGGGTTTTCTTTCCTGTATTCTTCAATAGCTTTTTTTACAAGTAAAGCAGCGGATTTATTTATTTCAAAGGCACTATTTTCAAGTCCGTAATCTTTCAAAGTAATATCCAATGCACCGAAAGTATTTGTCTCAATAATATCACTACCTGCTTTTAAGTACATTTTATGTATACTTTTAATCATTTCAGGCTTTGTAAGTACAAGATAATCAATACATCTGTCATATTTTTTCTCTTTGAAACTGTCGGAATTTAATACCATTGTCCCCATTGCTCCGTCTAAAAGAACTATTTTACTTTCCAAATCTTTTTTCAGTTGATAAAATGAATTTTTATATTTTATATTATCAGGCATTAAATTATTTTCCTTCCGAACTAAAAGTTAATTTCTAATTATTTTATCACAAAATTGGCGGTATGTATATGTAAAAGATTAGATTTAATTATAGATAATATCTGTTATTGTATAAATTATATATATAATAGAATGGAGATAACAAAAATATTATAAATACTAACTTGAAATATATAAATTAAATTTGTTTAACTTTTTTCAAAGGATAATTATATTGTAATTTTTTTAAATTACGAGTATACTACATATTATAAAAAATAAAAAACTAAAACACAATATATTGTGTTTTAGTGAAAGGATAAAATTAACATAAGATATAGAAAGGGAAATAGTAATGAGAAAATTAATTAAATTTGAAAAAGAAGATTGTAATCCTTGTGCAATGGTATCGGATTTGTTGGATAAAAGCGGAGTTGAATATGAAAAAGTAAATCCTTTCAACAATCCTGAGTTGGCAATGAAATATAAAGTGAGAACAGTACCTACTACAATACTTATTGAAAGTGATCAGGAAGTTAAAAGAACAATAGGCTTCAATCCTGAAGAATTAAGAGAAATAATAACGATGATTTAATAAAAACGGACTCTTTAAACGGGGACCGTTTTTGTTCCTCGTGTTTATTCTGTTTGATATTTTTTAACAGTAAAAATATCAGAACAGCAGAATTTTTAAGGTAAGTCCGTTATTTTTTTGGAAATTTTATAAAAAAGGAGCTGACATAATGTTTATATATTATGATTCCAAAACCGGAAATGTCCAAAGATTTGTAGATAAAATTAAAAAAGAAAGACCTGAATGGAATTATGTGAAAATATCCGAAGATATAGACATTGAAAATGAAGGACATTTACTAACATTTACTACAAAATTCGGGGAAGTTCCTGAAAAGACCGAAAAATTTATGACGAGAAATAATAATAAAGATTATATAAAATCCGTGAGTTCGAGCGGAAATATGAACTGGGGTACATTATTTGCTCTTGCAGCCGATAAAATATCGGAAAAATATAATATTCCTGTTTTAATGAAATTTGAATTGTCGGGAACTCATCCTCAAGTCGAATATTTAATAAACTATATTGAAAAAAATGATTAATTATAAAAAGGATTTTAGAAAAGAAAGGGTTATGAAAATGAATAAAGCTAAGAAATGGATATATTTAAACAATGAAATAATGGTAAAAGAAAATGGGGAATTTCAGCTTAACAAAGATAAAGAAGCCGTTTATTCTTATTTTGTCGATTATGTAAATAAAAATACGGTATTTTTCCATAATTTAAAAGAAAAAATGGATTATTTAATAGAAAATGATTATTACATAAATTTTTACGATATGTATAAGTTTGAAGAAATAAAGCAGGTTTTTGAACTTGTATATAATAAAAAGTTCAGATTTGCTTCTTTTATGAGTGCATCGAAATTTTATCAAAGTTACGCTTTGAGAGATGATTCGGGAGAAAAATTTCTTGAAAGATATGAGGACAGAATAGCGATAGTTTCCCTTTATCTTGCACAGGGAGATTTAAGCAAGGCTTTAGAATATGTGGAAATGCTTATTAATCAGGAATATCAGCCTGCCACTCCTACATTTTTAAATTCCGGGAAAAAGAGATCGGGAGAACTTGTGTCATGTTTCCTTGATGAAATGGGAGATAATCTTAGCGGTATAGGATATGCTTTTGACTCTGCGATGAAACTGTCTTCTATCGGAGGAGGAGTTTCCATAAATCTGTCTAAAATAAGAGCCAGAGGAGAATCGATAAAAGGTGTAGAAGGAAGAGCTTCGGGAGTATTGCCTATCATGAAAATAATGGAAGATATATTTTCCTATGCAAATCAGCTTGGACAGAGAGCAGGAGCGGGAGCTGTTTATTTGAATGTATTTCATTCGGATATAAATGAATTTCTCGACTGTAAAAAGATAAACGTGGATGAAAAAATAAGAATAAAATCTCTTTCTATCGGAGTAATAGTTCCTGATAAATTTATGGAACTGGCAAAAGAAGACGAGATTTGCTATACATTCAATCCGCATACTGTATTTTTAGAATACGGACAGTATCTGGACGAAATGGATATGAATGAAATGTACGAAAAATTAGTGGATAATCCTAATGTTAAAAAGAAAAAAATCAACGCGAGAGAACTGTTGATTAAAATTTCTCAAACTCAAAAAGAAAGCGGATATCCTTATTTATTCTTTAAAGATAATGCCAATAAAGAACATGCTTTGAAAGAAATCGGAAATGTAAAATTTTCCAACTTATGTACGGAAATAATGCAGCTTTCGGAAGTTTCCGATATAAATCCTTATTTTGAAGAAGATACGATAAGAAGAGGGATTTCGTGTAATCTGGGGTCGCTTAATATAGTTACCGTTATGGAAAACAACAGAATAAGAGAGGCGACAAGAGCAGCGATAGACTCGCTTACAACAGTGTCCGACCTTACGAATATAGACATTGTTCCGTCTATTAAAAAAGCTAACGAAGAGCTTCACAGTGTAGGTCTTGGGGCAATGAATCTGCACGGATTTTTAGCCAAAAACTTTATAATGTACGAAAGTAAAGAAGCCCTTGATTTTTGTAACGTATTTTTCATGATGATGAATTACTACTCGCTCGAAAGATCAATGGAAATAGCAAGAGAAAGAGGAGAAGTATTTAAAGACTTTGATAAATCCGAATATGCAAACGGAAATTATTTTAATAAATATATTGAAAAATCTTATTTCCCTCAAACAGAGAAAATAAAAGAATTATTTGACGGGATATATGTGCCGACTAAGGAAGACTGGGCAAGATTGAAAGAAGATGTTATGAAATACGGTGTTTACAATGCTTACAGAATGGCAATAGCTCCGAATCAGTCTACGTCTTATATTATGAACTCCACAGCCTCAGTAATGCCTATAGTTGATACGATAGAAGTCAGAGAATACGGGGACAGTACGACATTCTATCCGATGCCTTATTTGACAAATGACAATTATTTCTTCTATAAATCCGCATATGATATGGATCAGAAAAATATATTAAAACTTGTTTCTGTGATACAAAGACATGTGGATCAGGGAATATCGACTATATTATTTAATAAAAGTACGGACACTACGAGAGATTTGGCTAAATTGTATATTTACGGACATAGATTAGGCTTGAAATCCCTTTATTATACGAGAACGAGAAAGGCTACTATTGAGGAGTGTCTGTCGTGTTCTGTTTAGACCGTAAAACTACTTTTTCAAAGATGAAAAAGTAGCAAAAAATCTTTCCAACTCAAATTTTACAAAGAACCTACTTTTTAAAAAAAAGTAGCAAAAATTTACCAACCCAAATTTTACATACTCAAAAATGCACGTGAGCTATGAAAACAAAAAAGATGTTTTCATAACGCTCACTAACACATTTTTCACGTTGTAAAATTTGAATGTTGGGGAAAAAATCGAAAAATTGAATTATCAAAGTATAGAAAGAAGATCTAAGGTAGAAAGGATGATTGTTATATTGAACAACAATTTAGAAAAATTAGAATTGAAAGATATAGATGATATTATAAACGAAATAGATGAATTGTATAAAAGAGTAAATAAATTACCTTTATCTTTAAAAATATTTGTATCAGTATATATACTGTTATCATTGCTATTGATATTAAGTCATATTTATAATTTAAAATTTTTTTGGTATTTGATTATTGTATGGTCAATTTCTACTCTTATAGTAATTAGATGGTTGTATATTGCTAGAGATAAAAAAATAAAAGCTGAAATAAAACATTTTAATGAAGAAAAAAAATAGAAATAAACAGAGAAAAAGACTGGTTAAAAAAAGTTAATCTTATTTTGAAGGAAATAGTTAAAAAAAAATATATTATTTTAGATAGAAGTAACTATGAAATTTTAAAAAAAGAGCTGAAAGAAAAGAAAGTTGAGATAGAAAATAAATATGAAAAATTTATAGATAGATTTGTATTTATAATTTTTATAGGGATTTTATTTCAAATAACAAGTGCTTGGTGGGGAGGATTTTTCAGTAGTGGTGATAGAAAGGAATATTTTAATGGTACAATAATATATATTGTTTTTATAATAATGGTATCTATTCCAATAAGACAAATTCTTTGTGGATTTTCTCAGTTTTATAAATTAAAGATTGGTAGATTTGATAGAGCAAAAGAAATTTTGAAATGTCTTAAAGATAATAGTAAAATAAAAAGTACAAGTTACACAGGAAATCAAATAAAATATGAATTTTATGAGTTGGCAATCAAATATAATTGGGATTCATCCAAAATAAAAGAGATAATTAAAATAATGGATGATTTTTTAGGACAGTATTTATATACTATACAAAATAATTACGGTTACAAAAGTATAAGAAAAGCTTTTAGAAATATTGGTATAGAGAGTATAGAATTAGAATTGTTATTACTTTCGCTATATGAAACTAAATATAAAATAGTAGTGCAGAAGTATGTAAAAAGTTATCATAAAACTCATAATAAAGTACCAATCGCTTTTGAAAATATTTATAATGATTTGGAATTAACATAATTTAAAATAGAAAGTAGGTGTTATTTATAGAGGACAATACTTATAAGCAAATAACGGAAACAAAAGATAAGTATAAAAAGCAACAATATTGGAAAATTGCAGTCGGACTTAATCAAGTTGATGACTTAAAGCCGTCCGAAACTTTGAAAAAACTGGCATATGAAAATATAAATAACATCAAGACTTATATCGAAGTGGAAGATGAACTTTATAAGCATTATAATAAATTGGAAAAGATTAATAAGTCCGAGTACGAGTGTGATATTGTAAGTTTAAAAATTGTAAAATTGTTGGATGATACGAGTTTCACTTTGACGGTAAATACACTGAAAAATATTCATAAAGAATTATTTGAAAATGTAATAAATGAGAAATTTTGCGGAGAATTCAGAAAATACAATATACAAAAATTTGAAGATATTTTAAATGGAGACAGTGCAATTTACGGAAATTTTCAAACAATAGAGAAGGACTTATTTGATATTTTTGATTTATTAAATAAGAGAAAGTTTGATATAAATAATATAAAAGATATTATGGATTTATCTATAAATTGCATAACTGATATTTGGAATATTCATCCTTTTGTTGAAGGAAATACAAGAACTGCTACGATATTTACATTAAAATTATTGAAATATTTGGGAGTAGAAAATATTTCAAATGATTTATTTAAAGAAAATTCCAAATATTTTAGAGATTGTCTGGTTTTGTCTAATTATTCTGAATTGAATAGATATGGAGAGTTTGTAAAGCCTGACAACAGACCTTTACATAGGTTTTTTGAAAAATTGTTGATTGATGAGAATTTGAAATTGTTGGAAATAGAGCCTGTTCATAATAATAAATATTACGATAAAATTGAAAATCCGAGTAAGTTAATGGCATATGAAGATTTGAATGAAGATTTGGATTTAGATTGGTAGTAGCAAGACAGAAAATAGAAATTAATTTAATAATTCAAAGAAAGGAGATTTATGAAAAATAAAAAATTATTTATATTTATTATTGTAAATTTGATTATTGCAATATCCTGTTTTGGAAAATATAATGAAGATAGTTTAAAGAAAGATGCTTCTTTGTTGGAAGAAGTTATTTCTAAATGCAAAGTCGGGATAATGAAAAAGAATGACAGTAATTGTATTCTTGCACGAAAAATTCAGCAAGATTTGGCAAAAGAGGGTTGGGAGAAAAATAAGAAAATAATAATAGATAAATTAATTGAAAGCGGAAAAAATTTGGAAGAAAGAAAATATGAAACAATGTTTGATTTATGGTCACCCGAGTTGCTTTACAATGCTGCTGAAAATGCGGGAGTAGGAGTGGAAGAATTTAAAAAAGGCATAATAGATTATATGAATGGAAACGCTCCTAAAAAAGCAAAAGTTACAAGAGATTTTAATTCGGCAAAACCGGGAAGAACCACTAAAGGAAGAACTTATGTAAGAATTCCGGTAGTTTTTGATAATGAAGTTGACGGACAACATATAATAACAAGAAGAGAAACATTGGCTTTTGAAGATAAAGGAAAGTGGTATGCAATTAATTTAGACAGAGTTTCGCTTCCTGTTATAAAACAGACTTATCCTGATTAAAAATGAAATTGTATTATTGTATTAAAGAAAGGAAAAATTAAAATGAATAAAAAAATATACGAAGCAGTAAACTGGAACACACCTGAAAATGATTATGTAGAAATGTTTTGGGAGCAGAATTTAAAACAATTCTGGATAGATACTGAATATATTCCGTCAAAGGATATAGACAGCTGGCATTCATTGGAGCCTGAAATGAAATTGGCTTATTTGCAGGTGTTGGGAGGGTTGACATTGCTTGATACTTTACAGAGCCACACAGGAATGCCTAAAATTATAGATCATATTGAATCATTACAATGCCGTTCGGTATTGTCCTATATGTGTATGATGGAAACTATCCACGCAAAATCTTATTCTACAATATTTACGACAGTTGCATCTACGAGAGAAATAAACGAAACGTTTAACTGGGTTCAGGAAAATGAGCATTTGCAATATAAAGCAAATAAAATCGACTATTATTATCAGAAAATGAATAATCCGAAAGCTACAAAAAGAGAGATTTACATGGCTTTGTGTGCTTCGGTTTATTTGGAAACATATTTATTTTACAGCGGATTTTTCTTGCCTTTATGGCTTGCAGGACAGGGAGAAATGGTCGCAAGTTGTGATATAATAAAGAAAATAATAGCCGATGAATCTATTCACGGAGTGTTTGTGGGACTTCTTTCGCAGGAAATATACGCTACATTCAGTGAAGAAGAAAAAGAAAGTGTCAGAAAAGAATTAAAAGAATTAATGTATGATTTATATGAAAATGAAGCGAGATATACTGATGAAGTATACGGAGATATAGGACTTACTGCCGATGTTAAAGAATATATAAGATATAACGCAAATAAGGCATTGATGAACTTGGGATTTGAAGAGGAATTTGAAGTGAAAGATGTAAATCCTATTGTATTGAACGGATTAAATGTGGAAACGACACAACATGATTTCTTCTCGAAAAAATCTACAAATTATGAAAAAGCATTGGAAGTAGTTCATTTGAATGACGAAGATTTTGAATTTAAAAAGGAAGAAATAGATTTGGATATTTAA

Protein sequences of DBSCAN-SWA_3

>NZ_AP019822|954694:966505|960434_962534_+|WP_026737472.1|DBSCAN-SWA
MKMNKAKKWIYLNNEIMVKENGEFQLNKDKEAVYSYFVDYVNKNTVFFHNLKEKMDYLIENDYYINFYDMYKFEEIKQVFELVYNKKFRFASFMSASKFYQSYALRDDSGEKFLERYEDRIAIVSLYLAQGDLSKALEYVEMLINQEYQPATPTFLNSGKKRSGELVSCFLDEMGDNLSGIGYAFDSAMKLSSIGGGVSINLSKIRARGESIKGVEGRASGVLPIMKIMEDIFSYANQLGQRAGAGAVYLNVFHSDINEFLDCKKINVDEKIRIKSLSIGVIVPDKFMELAKEDEICYTFNPHTVFLEYGQYLDEMDMNEMYEKLVDNPNVKKKKINARELLIKISQTQKESGYPYLFFKDNANKEHALKEIGNVKFSNLCTEIMQLSEVSDINPYFEEDTIRRGISCNLGSLNIVTVMENNRIREATRAAIDSLTTVSDLTNIDIVPSIKKANEELHSVGLGAMNLHGFLAKNFIMYESKEALDFCNVFFMMMNYYSLERSMEIARERGEVFKDFDKSEYANGNYFNKYIEKSYFPQTEKIKELFDGIYVPTKEDWARLKEDVMKYGVYNAYRMAIAPNQSTSYIMNSTASVMPIVDTIEVREYGDSTTFYPMPYLTNDNYFFYKSAYDMDQKNILKLVSVIQRHVDQGISTILFNKSTDTTRDLAKLYIYGHRLGLKSLYYTRTRKATIEECLSCSV
>NZ_AP019822|954694:966505|959640_959880_+|WP_026737470.1|DBSCAN-SWA
MRKLIKFEKEDCNPCAMVSDLLDKSGVEYEKVNPFNNPELAMKYKVRTVPTTILIESDQEVKRTIGFNPEELREIITMI
>NZ_AP019822|954694:966505|963152_963863_+|WP_026737474.1|DBSCAN-SWA
MKEIVKKKYIILDRSNYEILKKELKEKKVEIENKYEKFIDRFVFIIFIGILFQITSAWWGGFFSSGDRKEYFNGTIIYIVFIIMVSIPIRQILCGFSQFYKLKIGRFDRAKEILKCLKDNSKIKSTSYTGNQIKYEFYELAIKYNWDSSKIKEIIKIMDDFLGQYLYTIQNNYGYKSIRKAFRNIGIESIELELLLLSLYETKYKIVVQKYVKSYHKTHNKVPIAFENIYNDLELT
>NZ_AP019822|954694:966505|962814_963108_+|WP_146966395.1|DBSCAN-SWA
MNNNLEKLELKDIDDIINEIDELYKRVNKLPLSLKIFVSVYILLSLLLILSHIYNLKFFWYLIIVWSISTLIVIRWLYIARDKKIKAEIKHFNEEKK
>NZ_AP019822|954694:966505|965500_966505_+|WP_026737476.1|DBSCAN-SWA
MNKKIYEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWHSLEPEMKLAYLQVLGGLTLLDTLQSHTGMPKIIDHIESLQCRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFNWVQENEHLQYKANKIDYYYQKMNNPKATKREIYMALCASVYLETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLSQEIYATFSEEEKESVRKELKELMYDLYENEARYTDEVYGDIGLTADVKEYIRYNANKALMNLGFEEEFEVKDVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLNDEDFEFKKEEIDLDI
>NZ_AP019822|954694:966505|963880_964789_+|WP_051411747.1|DBSCAN-SWA
MLFIEDNTYKQITETKDKYKKQQYWKIAVGLNQVDDLKPSETLKKLAYENINNIKTYIEVEDELYKHYNKLEKINKSEYECDIVSLKIVKLLDDTSFTLTVNTLKNIHKELFENVINEKFCGEFRKYNIQKFEDILNGDSAIYGNFQTIEKDLFDIFDLLNKRKFDINNIKDIMDLSINCITDIWNIHPFVEGNTRTATIFTLKLLKYLGVENISNDLFKENSKYFRDCLVLSNYSELNRYGEFVKPDNRPLHRFFEKLLIDENLKLLEIEPVHNNKYYDKIENPSKLMAYEDLNEDLDLDW
>NZ_AP019822|954694:966505|954694_958195_-|WP_051411746.1|DBSCAN-SWA
MPNNIKYKDSFYELKKDLNDKIVLLDGAMGTMIQKQNLTAEDFGGEKYEGCNDYLVLTKPDVIKNIHKMYLESGSDIIETNTFGALDIVLRDYDLEDKVFEMNKAAAGLVRKAIEEYRKENPDEQRNLYVAGALGPSNKSISVTGGVTFDELIHTYYTATSGLLAGNVDIILFETIQDTRNLKAAYLGLQKAMEEYYHVPLMLSFTIESTGTTLAGQTADAFYYAVNHMHPLSVGLNCATGPEFMTQFLKILNNVSNTYISVYPNAGLPNEEGKYEETPDTLSAKIEPFFQNKYLNIVGGCCGTTPEHIKQIKEKSIKYTPRIIEEHSETKNEVSGLITLNPPQDRPIYVGERTNVIGSRIFKNLIVNEKFDEATEVARLQIKGDADVIDVCLANPDRDEISDMKTFLEKVSKFAKVPIMLDSTDINVIKEGLTYLQGKGIINSINLEDGEKKFDDMSKLIKKFGASVVVGLIDEEGMAVSLEKKIKVAKRSHELLTKKYGIDERDIVFDTLVFPVATGDQKYIGSASATIEAIREIKKEMPNVKTILGVSNISFGLPVAGREVLNSYYMEKAYETGLDYAIVNTEKLIPLSEISDKEKELSEALLFNTNDDTVADFVAFYREKKGVEKKADTTNMTPEEQVSNLVVEGSKKDLIPLLDTLLQKYSPLDIINGPLMDGMDEVGKLFNNNDLIVAEVLQSAEVMKASVSHLEQFMEKSEPSTKGKVIMATVKGDVHDIGKNLVGIIIGNNGYDVVDLGINTPAEKIREAIINEKADFVGLSGLLVKSATEMVNTVAVLREAGIKIPIFVGGAALTEKFTVNKIEPSYENNIVIYSKDAMTALADLNKMIVPEKFEEFKQYLQSRRDMLLLKDKDAIEKLNVRQTVGDVKNADGSFDITKVKLPEYNFEKIYKPSTLNKQIITNISAKEVFKYLNLQMLIGKHLGMKWVARELLEKGDPKATKMYNEILDIINHGDEYFDIKAIYKYFPCRKKDGKIEILSDDLKEVIETFDFPRQTWGQHLSLNDYIHPAEIDYIGMFVVSAGEKSRIVSNELKEKGEFYKGHLVNSIGLELAESTAEYAHYLMRKDVGIIDDENLTIDEIHRAKYHGKRYSFGYPACPDLSDQDKLFNLLKPERFGIKLTLGHMMYPEASVSAIVFSQPFAKYFNM
>NZ_AP019822|954694:966505|960028_960403_+|WP_026737471.1|DBSCAN-SWA
MFIYYDSKTGNVQRFVDKIKKERPEWNYVKISEDIDIENEGHLLTFTTKFGEVPEKTEKFMTRNNNKDYIKSVSSSGNMNWGTLFALAADKISEKYNIPVLMKFELSGTHPQVEYLINYIEKND
>NZ_AP019822|954694:966505|958337_959306_-|WP_026737469.1|DBSCAN-SWA
MPDNIKYKNSFYQLKKDLESKIVLLDGAMGTMVLNSDSFKEKKYDRCIDYLVLTKPEMIKSIHKMYLKAGSDIIETNTFGALDITLKDYGLENSAFEINKSAALLVKKAIEEYRKENPDEKRNLYVAGASGPSNKSLSSGNITFEELAHAYYVSVSGLLAGNVDIILLETILDTESLKAAYLGIQKAMKEYYYVPLMLSFTLKNTGTTFAGQTIHEIYNTACSMNPLSIGFNCAVGGEFFGKFIKTLNNISNVYTSFYPNAGLPDKNGKYGKTPDILASEIEFLFKNSCLNIVGGCCGTTPEHIKQIKEKSIKYLPRTVKNI
>NZ_AP019822|954694:966505|964840_965458_+|WP_026737475.1|DBSCAN-SWA
MKNKKLFIFIIVNLIIAISCFGKYNEDSLKKDASLLEEVISKCKVGIMKKNDSNCILARKIQQDLAKEGWEKNKKIIIDKLIESGKNLEERKYETMFDLWSPELLYNAAENAGVGVEEFKKGIIDYMNGNAPKKAKVTRDFNSAKPGRTTKGRTYVRIPVVFDNEVDGQHIITRRETLAFEDKGKWYAINLDRVSLPVIKQTYPD

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051411746.1|954694_958195_-	methionine synthase	A0A140XBC7	Dickeya_phage	3.6e-10	48.3
WP_026737469.1|958337_959306_-	homocysteine S-methyltransferase family protein	A0A140XBC7	Dickeya_phage	1.6e-08	48.3
WP_026737470.1|959640_959880_+	thiol reductase thioredoxin	G9J1X0	Bacillus_phage	6.8e-14	46.2
WP_026737471.1|960028_960403_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	H9NCC2	Sphingomonas_phage	2.4e-26	46.7
WP_026737472.1|960434_962534_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	5.4e-248	59.5
WP_146966395.1|962814_963108_+	hypothetical protein	NA	NA	NA	NA
WP_026737474.1|963152_963863_+	hypothetical protein	NA	NA	NA	NA
WP_051411747.1|963880_964789_+	Fic family protein	NA	NA	NA	NA
WP_026737475.1|964840_965458_+	hypothetical protein	NA	NA	NA	NA
WP_026737476.1|965500_966505_+	class 1b ribonucleoside-diphosphate reductase subunit beta	H9NCD1	Sphingomonas_phage	1.6e-128	67.6

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NZ_AP019822|1182111:1187959|DBSCAN-SWA
GATGAAAATAGCAATATTTTTCGGAAGTAAATCGGATACGGAGAAAATGAGAGGAGCGGCTAATTGCCTGAAAGAATTCGGGATAGAATACGAGGCTTATATATTGTCGGCCCACAGAGTTCCCGAAAAACTTGAGGAAGTTTTGGCAGAAGTTGAGAAAAAGGGAGCAGAAGTAATAATCGCAGGAGCGGGACTTGCGGCACATTTACCGGGAGTAATAGCTTCAAAAACAGTTCTGCCTGTAATAGGAGTTCCATTGAATGCGGCATTGGGAGGAACAGATTCTCTGTACTCCATAGTACAGATGCCTAAGTCAATACCTGTAGCTACTGTAGGGATAGACAATTCGTATAATGCAGGAATGCTCGCAGTAGAAATACTCGCAGTAAAATATGAAGATATAAAAGAAAAACTTGTAAAATTCAGAAAAGAAATGAAAGAAAAATTTATAAAAGAAAATGAGCAAAAAGTTGAGTTTTAATAGAAGATTTGAGAGGTTTAATTAGGAATCGCAAAAAGTTAAAAGAATAAAATTGTTATTTAAAATATAAATTTGATTATAGAAAATGGAGGAAAAATGGAAAAGAAAGAATTTATTTATGAAGGAAAAGCAAAACAGGTTTATTCTACAGATGACGAAAATCTTGTAATTATACACTATAAAGACGATGCAACAGCAGGAAACGGAGTAAAGAAAGGAACAATAAAGGATAAAGGAATTATAAATAACAAAATTACGGCAAAATTGTTTTCGGTGCTTGAAAAAAACGGGATAAGAACACATTTTAAAGAAATGCTCAATGAAAGAGATCAGCTTTGTGAAAAACTTGAGATTGTTCCTCTTGAAGTAATAGTAAGAAACGTTATAACAGGATCAATGGCAAAAAGAGTGGGAATAAAAGACGGTACAATACCTAAAACTACAATCTTTGAAATTTGCTATAAGAATGATGAATACGGAGATCCGTTAATTAACGATTATCATGCGGTAGCCATGGGACTTACGACTTTTGAAGAATTGAAATATATTTATGAAACAACTTCAAAAATAAACGATTTATTGAAAAAAGTGTTCGATGAAGAAGGAATTACTTTAGTCGACTTTAAAATAGAATTCGGTAAAAATAGCAAAGGAGAAATACTTTTGGCTGATGAAATAACTCCGGATACTTGCAGACTTTGGGATAAAGAAACAGGAAAAAAACTTGATAAAGACAGATTCAGACAGGATTTGGGAGGAATAGAAGAGGCTTACATCGAGATATTAAAAAGACTGGAGGCATAAGAAAAATGGCGAGTGTAAAAAGTGCAGATAAAATTGAAGAAGGAGGAGTTTTTGCTCTTTATTCAAGAAAATTGAGAACGGATCTTGCGGGACTTGCATACTACGGAATGTATGCGTTACAACATAGAGGACAGGAAAGTGCAGGTTTCAGTATTGCAGACTCTATATCGGAAAACGAAGTAAAACTGAAAACTGTTAAAGGAAGAGGTCTTGTAGCCGATGTATTTTCATTAAAAGACTTACAGTCTTATTCAGGAAATATCCTTGTGGGACATTTGAAATATGCTACCGAAGGAGGAGCGTCTTCACACAGTTATCAGCCGCTAAGAGGCGAATCGATCATGGGAAAAGTTGCTATTGTTCATAACGGGAACTTATTGAACACAAAAGAGTTGAAAGAAGAACTGATGAAAAACGGCTCGATTTTCCAAACTAAAACCGATACGGAAATTATTCTGAAATTATTGGGAAAAAACGGGAAATTCGGATATGATCAGGCTATTCTAAACACATTGAAAAAACTGAAAGGCTCTTTTGCTATTGCGGTTATAATAGAGGATAAATTAATCGGAATAAGAGATCCTTTAGGAACAAGACCTTTATGTCTGGGAATGAGAGAAGACGGAGTTTACGTTCTGGCTTCCGAATCGTGTGCATTGGATGCAGTAAATGCTGAGTTTGTGAGGGATATAGAGCCGGGAGAAATAGTAGTTATCGACAAACAGGGAATAGAATCAATAAGATATGCGAATAAAAAGAAAAAATCCTTTTCATCTTTTGAATATATATATTTTGCACGTCCCGACAGTGTTATTGACGGGATAAATGTATACAGCTCAAGACATGAAGCCGGAAAACTTTTATATAAGCAGAATCCGATAGAAGCTGATTTGGTAATAGGAGTCCCGGATTCAGGAGTGCCTGCAGCTATCGGATATTCCGAAGCAAGCGGTATTCCTTATGGAACGGCTCTTCTGAAGAATAAATATGTAGGAAGAACATTTATTTTGCCTACACAGGAACTTAGAGAAAATGCCGTAAGAGTTAAACTTAATTCGATGAAAAGTCTTATTGAGAATAAAAGAATCGTTGTAGTGGACGATTCGCTTGTAAGAGGGACTACTTCAAAAATTCTTATAAAAATTCTTTTTGAGGCGGGAGCAAAAGAAGTGCATTTCCGTTCGGCATCTCCTGTCGTTATAAGCGAGTCTTATTTCGGAGTGAATATTGCCAGTGAAAATGAACTTATAGGAAATACAATGACAATCGATGAAATAAGAGATTATATCGGTGCAACATCGTTGGATTATCTTTCAATAGAAAATATAAAGAAAGCATTACAGAATAAAGATGTGAATTTGGATTGTTTTAAAGATTAAATTTTTTAAGTATTTAATGTAAATAGAAAGGAAAAATAAAATGGCGATTTCTTATAAAGATTCCGGTGTGGATAAGGAAGAAGGATATAAAACCGTAGAGAAAATAAAAGAAAAGGTAAAAAGCACATACAGCAGTAATGTTATGAATGAACTGGGCAGTTTTGGAGCATTGTATAAGCTTGGAGATTATAAAAAGCCGGTGCTTGTGTCGGGAACTGACGGTGTCGGAACGAAATTGAAAATTGCCTTTGAAACAGGAAAATACGACACTGTAGGAATTGACTGCGTGGCAATGTGTATAAACGACATATTATGTCACGGAGCGAAACCTTTATTCTTTTTGGATTATCTTGCATGCGGAAAACTTGATTCGGATGTGTCTTCGGAAATAATAAAAGGAGTAGTTGAAGGCTGTCTCCAGTCGGAAGCTTCACTGATAGGAGGAGAAACGGCGGAAATGCCCGGATTTTATGCTCACGGAGAGTATGATATAGCGGGGTTTGCAGTGGGAGTCGTAGAAGAAGATAAAATTGTAAACGGCTCCGATATAAAGGAAGGAAATGTGATTATTGCTCTTTCTTCCAGCGGTGCTCACAGTAACGGATTTTCATTAATAAGAAAACTTTTTACCGATTTGAATGAAGAATACGAAGGAAAAACTGTAGGAGAATATCTGCTCACACCTACAAAAATATATGTAAAATCAATTCAAAAATTGACTGAAAATATTAAAGTGAACGGAATGGCTCATATAACAGGAGGAGGTCTCATAGAAAATATTCCGAGAATAATTCCTGAAGGATTGTGTGCCAATATTGAAAAAGAAAAAATACAAATTCATCCGTTATTTAAAAATGATAAATTTAAAAATGTAAATGAAGATGAAATGTGGGGAACATTTAATATGGGAGTAGGATTTACAGTTATTCTTGATAAAAAAGACAGTGAAAAAGCTATGGAAATTTTAAGAGAAAACGGTGAAACTGCATATGAAATAGGCTATATAAGTAAAGGAGATAAAAAAATATGTCTGAAATAAAACCGAAAATCGCAGTTTTGGTATCAGGTTCAGGGTCAAATTTGCAAACAATTATTAATAATATTGAAAACGGAAATTTGAATTGTGAAATTTCATATGTGATAGCCGACAGATTCTGTTATGCTTTGGAAAGAGCTGAAAAACATAAAATCAAATCAGTTTTACTGGATAGAAAGATATACGGGGATAAACTTTCGGATAAAATAAATAAAATTTTGGAGAAAAATAATGAAAAGACTTCCTATATAATACTGGCAGGATATTTGTCCATATTGTCAGAAGAATTTATCGGAAAATGGGAAAAAAAGATAATCAATATTCATCCGTCATTACTTCCTAAATACGGAGGAAAGGGAATGTGCGGAATGAAAGTACACGAGGCGGTCATAAAAAATAAGGAAAAAGAAAGCGGCTGCACCATTCATTATGTGGATTCCGGGATAGATACAGGAGAGCCTATAATGAGCATTAAAGTAGAAGTTTCTGAAAATGATACGCCTGAAAGTCTGCAAAAAAAAGTTCTGGAAAAAGAGCATATACTGCTGACACAGGGGATAATAAAACTTCTGGAAAATGAAAGAGTTTAAAAAATCGGGGAAAATAAATTAACGGGAGGAATATTAATTTGAAAAAAAGAGCTTTGATAAGTGTTTTTGATAAAAGCGGAATACTTGAATTTGCAAGATTTTTATATGAGAAAAATGTAGAAATAGTATCTACAGGAGGAACATACAGATATTTGAAAGAAAATGGGCTTGAAGTAACTGAAATTTCCGAAGTAACCAATTTTAAGGAAATGCTTGACGGAAGAGTGAAAACTCTGCATCCGAATATACATGGAGGAATACTCGCTGTAAGAAATAATAAGGAACATATGGAAACTATTGAAAAAGAAGGGATTCAAACGATAGATTTTGTAATTGTAAATCTTTATCCTTTTTTCAGAGAAGTACAGACAGATAAAAGTTTTGACGAGAAAATCGAATTTATCGATATAGGCGGACCTACAATGCTCAGATCCGCTGCAAAGTCTTTTGCAGATGTAACAGTAATATGTGATACCGAAGATTATGCAAAGGTACGGGAAGAATTGGAAAGTAAAGGGGAAACTTCTTTAGAAACAAGAAAAAAACTGGCAGGAAAAGTGTTTAACCTCACGTCTGCTTATGATGCGGCTATTTCCAATTTCCTTCTTGATGAAGAATATCCGAAATATTTGAGTTTGTCTTATGAAAAGAAATTTGATTTAAGATACGGAGAAAATCCTCATCAAACTTCAGCTTACTATGTGTCAACTACGGAAAATGGAAGTATGAAAAATTTTGTTCAGTTAAACGGAAAAGAATTGTCTTTTAACAATATAAGAGATATGGACATAGCATGGAAAGTAACTGGAGAATTTGATGAGATAGCCTGCTGTGCGGTAAAACACTCGACTCCATGCGGAACGGCTATAGGAGAAGACGTATTTACAGCCTATAAGAAAGCTCATGACAGCGACCCTGTTTCTATATTCGGAGGAATTGTTGCAATAAACAGAGAAATAGATGCAAAAACTGCCGAAGAATTAAATAAAATATTTTTAGAAATAGTAATCGCTCCTTCTTATTCTGAAGAAGCCCTTGAAATATTGAAAAATAAGAAAAATTTGAGAGTAATACAGTGTGAAGTTCCTTGTTCTCAGGATAAACTTGAGTATATTAAAGTGGACGGAGGAATACTTGTTCAGGAAACAAACACAAAAATGATAGAAGAAATGAAAGTCGTAACTGAAAAACAACCGAGTGAAAGAGAAAAACAGGATGTGATTTTGGGAATGAAAGTGGTAAAACACGTCAAATCTAATGCGATTGTAGTAGTGAAAGACGGTACTGCCAAAGGTATCGGAACAGGTCAGACAAATAGAATATGGGCTACAATTCATGCTCTTGAACATGCCAAAGGAGAAGGAGAATCATTGGAAGGAGCAGTGCTTGCATCTGATGCTTTTTTCCCGTTCAGAGATTGTGTGGATGAAGCTGCCAAATACGGAATAAAAGCTATAGTACAACCGGGAGGCTCGATGAGAGATCAGGAATCTGTAGATGCTTGCAATGAACATGGGATAAGTATGGTATTTACAGGGATAAGACATTTTAAACATTAA

Protein sequences of DBSCAN-SWA_4

>NZ_AP019822|1182111:1187959|1183400_1184774_+|WP_051411758.1|DBSCAN-SWA
MASVKSADKIEEGGVFALYSRKLRTDLAGLAYYGMYALQHRGQESAGFSIADSISENEVKLKTVKGRGLVADVFSLKDLQSYSGNILVGHLKYATEGGASSHSYQPLRGESIMGKVAIVHNGNLLNTKELKEELMKNGSIFQTKTDTEIILKLLGKNGKFGYDQAILNTLKKLKGSFAIAVIIEDKLIGIRDPLGTRPLCLGMREDGVYVLASESCALDAVNAEFVRDIEPGEIVVIDKQGIESIRYANKKKKSFSSFEYIYFARPDSVIDGINVYSSRHEAGKLLYKQNPIEADLVIGVPDSGVPAAIGYSEASGIPYGTALLKNKYVGRTFILPTQELRENAVRVKLNSMKSLIENKRIVVVDDSLVRGTTSKILIKILFEAGAKEVHFRSASPVVISESYFGVNIASENELIGNTMTIDEIRDYIGATSLDYLSIENIKKALQNKDVNLDCFKD
>NZ_AP019822|1182111:1187959|1186438_1187959_+|WP_026737638.1|DBSCAN-SWA
MKKRALISVFDKSGILEFARFLYEKNVEIVSTGGTYRYLKENGLEVTEISEVTNFKEMLDGRVKTLHPNIHGGILAVRNNKEHMETIEKEGIQTIDFVIVNLYPFFREVQTDKSFDEKIEFIDIGGPTMLRSAAKSFADVTVICDTEDYAKVREELESKGETSLETRKKLAGKVFNLTSAYDAAISNFLLDEEYPKYLSLSYEKKFDLRYGENPHQTSAYYVSTTENGSMKNFVQLNGKELSFNNIRDMDIAWKVTGEFDEIACCAVKHSTPCGTAIGEDVFTAYKKAHDSDPVSIFGGIVAINREIDAKTAEELNKIFLEIVIAPSYSEEALEILKNKKNLRVIQCEVPCSQDKLEYIKVDGGILVQETNTKMIEEMKVVTEKQPSEREKQDVILGMKVVKHVKSNAIVVVKDGTAKGIGTGQTNRIWATIHALEHAKGEGESLEGAVLASDAFFPFRDCVDEAAKYGIKAIVQPGGSMRDQESVDACNEHGISMVFTGIRHFKH
>NZ_AP019822|1182111:1187959|1182687_1183395_+|WP_026737635.1|DBSCAN-SWA
MEKKEFIYEGKAKQVYSTDDENLVIIHYKDDATAGNGVKKGTIKDKGIINNKITAKLFSVLEKNGIRTHFKEMLNERDQLCEKLEIVPLEVIVRNVITGSMAKRVGIKDGTIPKTTIFEICYKNDEYGDPLINDYHAVAMGLTTFEELKYIYETTSKINDLLKKVFDEEGITLVDFKIEFGKNSKGEILLADEITPDTCRLWDKETGKKLDKDRFRQDLGGIEEAYIEILKRLEA
>NZ_AP019822|1182111:1187959|1182111_1182591_+|WP_026737634.1|DBSCAN-SWA
MKIAIFFGSKSDTEKMRGAANCLKEFGIEYEAYILSAHRVPEKLEEVLAEVEKKGAEVIIAGAGLAAHLPGVIASKTVLPVIGVPLNAALGGTDSLYSIVQMPKSIPVATVGIDNSYNAGMLAVEILAVKYEDIKEKLVKFRKEMKEKFIKENEQKVEF
>NZ_AP019822|1182111:1187959|1185800_1186400_+|WP_026737637.1|DBSCAN-SWA
MSEIKPKIAVLVSGSGSNLQTIINNIENGNLNCEISYVIADRFCYALERAEKHKIKSVLLDRKIYGDKLSDKINKILEKNNEKTSYIILAGYLSILSEEFIGKWEKKIINIHPSLLPKYGGKGMCGMKVHEAVIKNKEKESGCTIHYVDSGIDTGEPIMSIKVEVSENDTPESLQKKVLEKEHILLTQGIIKLLENERV
>NZ_AP019822|1182111:1187959|1184814_1185813_+|WP_146966450.1|DBSCAN-SWA
MAISYKDSGVDKEEGYKTVEKIKEKVKSTYSSNVMNELGSFGALYKLGDYKKPVLVSGTDGVGTKLKIAFETGKYDTVGIDCVAMCINDILCHGAKPLFFLDYLACGKLDSDVSSEIIKGVVEGCLQSEASLIGGETAEMPGFYAHGEYDIAGFAVGVVEEDKIVNGSDIKEGNVIIALSSSGAHSNGFSLIRKLFTDLNEEYEGKTVGEYLLTPTKIYVKSIQKLTENIKVNGMAHITGGGLIENIPRIIPEGLCANIEKEKIQIHPLFKNDKFKNVNEDEMWGTFNMGVGFTVILDKKDSEKAMEILRENGETAYEIGYISKGDKKICLK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026737634.1|1182111_1182591_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.8e-26	44.9
WP_026737635.1|1182687_1183395_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	5.1e-41	43.5
WP_051411758.1|1183400_1184774_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	2.7e-54	31.9
WP_146966450.1|1184814_1185813_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	4.8e-61	41.8
WP_026737637.1|1185800_1186400_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.2e-19	35.3
WP_026737638.1|1186438_1187959_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.3e-69	48.0

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>NZ_AP019822|2013442:2020611|DBSCAN-SWA
TTTATTTTTTCCTTCCGAACATCTTATCCAAGTCGTCTTTTGTCAACTTTACTATAATAGGACGACCATGAGGACAAGTGTATTTTCCTACTTCGTGAAGCCTTCTCACCATATTCTGCATTTCGTTCATATTGAGTTTTTGACCTGCTTTTACTGCACCCTTACACGACATGGAAATAATAATATTCTCTCGCAAATCTTTTATTTCGCTCTCACTTTTCAAATCCGAAAGCAATTTCAAAAATACATTTTGTATACTGTCTCTAAAGTCAAACGCCGGAACCGCTCTGAACACTATCTCGTTATTGGAAAATTCGTCTATATCAAAACCGAATTCATTAAATACTTCAATATTATCAAAAATAAGACTTTTTTCAACTTCACTCACTTCCATTTTCTGAGGAAGTAACAAATGCTGAGATTTATGCTCTTTACTCGAAAATTTTTCTTTCAATTCTTCATAAAGTATTCTCTCATGGATAATATGCTGATCGTAAATTTCCAATTCATTATTTTTTCTGACAAGAATATATGTATCGAAAATTTGTCCCAAAACATCATATGTAAATTGCTCCCCTGTATGCTTTTCAAATGTCCCGACTTTATAATCATTTCCTGTTTCACGTATACTTTCCTCTTTTATTTCCAATTCTTCCTTTATCTTATCGGATTTTTCAAAAACTTTTTCATTTTTGTTCATTTCTTCAATTATATAATCATCTGTGTCATGCAATAACCTTGAACTTTCAATTTCTTTATTCTCTTTTATTTCGTTATTTTCTGCATTCGAGCCTATAATTTCTTCTAAAGTTCTTTCCTGAATTTTATTCCCGGCTGAAAAATCTCCGTCATGAGTTTCAAAACTGAAAAATTTCTGACTTTCTCCTTTTATAACTTCATCCGAAAATAAATCTTTTATTTTTTCCTCTTTATTTTCAACATTTATACTTTTTTTCAATAAATCTATATTCGGCTGCCAGCCTTCTCTGTCGCTCTGATAAAAATATTCGTCTATTGCATCTTTTATCTGTTTATAAACTATTTTATCATTGGAAAATTTTACAATTTTTTTTGACGGATGAACATTTACATCAATTTCTTTTGGGTCAATATCAAAAAATATAATTACAAAAGGATATTTTCCTTTCATCAGTTTTGTATAATATCCGTCTATAACCGCTCTTTCTATTGTGTTGGACTTTACATATCTTTTATTTACATAAGTAAATATATAATCTTTACTGCTTCTCAATATTTCGACATTACCGAGATAACCGTATTCAAATTTTTTCAGATTTCTTAAAACCGATTTTCCGAAAAGCTCAAGTATTGCATTTTCTATTCCTTTTCCGCTTGTATTTATACTTTGTTTTCCGTCAAATTCCAATGTAAAAGCAACATCACTGTTAGCAAGTGCTTCTTTTAATACAATATCCTTTATTTTGTTGTATTCTGTAGACTCTTTCCTCAAAAACTTCTTTCTCGCCGGAGTATTATAAAATAAGTCTCTTACTTCTATTTCAGTTCCTATATTTCTTGAAACTTCTTCAAATTTTCTGACTACTCCTCCATAACTTGCTATTTTATATCCTGTGGAGCTATTCTCCGAACGTGTTGTTATCGTAAGTTTGGATACTGCCGCAATAGATGCCAGTGCCTCTCCTCTAAATCCGTAAGTATTTAAATTAAATACATCATCTTTTGTTGAAATTTTTGAAGTAGCATGTCTTTCAATAGAAAGTAAAGTATCGTCTTTGTCCATTCCTATACCGTTATCATTTATTTTGACATCCATTCCGCCTTTAAAAACTTCTATTTTTATAATAGTAGCTTTCGCATCAAGAGAATTTTCTATCATTTCTTTTATCATTGATGCCGGATTTTCCACTACTTCTCCTGCCGCAATTATATTCGACACACTTTCATCCAAAATTTTTATATATCCCATTATATTGAACTGCTCCTTATATTTGTTTTTCTATTTTCACTTTGATTATACCTCAAAAATCTTTTTATTCATATATAATTTTGCTTTTTCTTTCAATAATTTAAAATTTTTTAAGATATTCTATATTATCATCATTTACTGTATATAATTTCATTTAATCCGACTCATTCTTCTAAAAAAGCCGCCTTTTAGGCAGCTCAAATTTATAGTCTCTTCACTTAAAGGCGACGGAACACCTGAATTTAATCTTTTTCTTATTTAAAGTATAGTGGATTCTCTATTTTTTGTCAAGAGATAAATCTTTTATAATTCTTGAATAAAAATATGTCCCATTTTCTCTTTTTTTGTTTTCAAATATTTTTTATCAAATTCATTAAATTTTATTTCGATTGCTTCCCTTGCTACAACCTTTATCCCGTATTTTTTCAATCCTTCTATTTTCAAAGGATTATTTGTTTTTAAGGATATCGACTTTACCTTGAGATCCTTTATTATTTGTGCTGCTACCGCGTAATCTCTTAAATCTTCCTGAAATCCCAACTGATGATTAGCCTCTACAGTATCATATCCTTCATCTTGCAATTTGTACGCTTTCAGTTTGTTGATTATTCCGATACCTCGTCCTTCCTGTCTTAAATAAATCAGCAATCCTTCTCCTTTTTCTTCTATTTCTTTTAAAGATCTGTGAAGCTGCTCCTGACAATCACAACGTTTGGAACCGAACACATCCCCGGTTAAACATTCAGAATGAAGTCTGACACTTACATTTTCCTTATTTCTTATATCTCCTTTAATAACTGCTATATACTCTTTATTTTCAATTTTATCACTATATCCGACAAAATCAAAATTTCCGAATTTTGTAAAAATGTTTACTTCTGCCTCTTTTTTTACTAATTTTTCGTTATTTTTTCTATACAATATTAAATCGTCTATTGTTATTATTTTCAGATTGTATTTTGTACAAAATTCAAATAACTCGTCTCTTCTCGCCATAGTTCCGTCTTCATTTAAGATTTCCATTATTACACCTACTTCTGAAAATCCAGCTATTCTTGATAAATCCACAGCTGCTTCGGTATGTCCTTTTCTTTCCAACACTCCCTTTTCTTTAGCAATTAAAGGAAAAATATGCCCGGGTTTTCTGAAATCTTTTGCTTTTTTCTCCAAATTCCCCAAATCGGTAATTGTTTTCAATCTGTCTGCAACGGATATTCCTGTAACTGTTCCTTCATAAGCATCAACAGAAGTAGTAAAAGCTGTTTCATGATGATCAGTGTTTACTCTGTTCATAGGACCCAGCTCCAGTTCTTCCGCTCTTCTTCGGGATAAAGGAACGCACATCAATCCTCTTGCTTTATTTATCATAAAATTTATCATCTTATAAGTAGCCGACTGAGCAGGCAAAAACAGATCTCCTTCATTTTCCCTGTCTTCGTCATCTACAATTACTATAACTTTCCCTTTCTTTATATCTTCCAATGCTTCTTCTATCGTGTTAAATTTACTGTCCATTTTTTTCACCTCTTTTTGTTTTGTTAAAAACCGTTTTCTCTTAAAAATTCAGGTGTTATTTTCGATTTTCTATTTTGCTCTTTTTCATATTCAGAAAATTTCAAAATTTTTTCTACATATTTTCCAAATAAATCCGTTTCGACATTTACAAAATCTCCTGATTTTTTTCCTCCTAAAATAATATTTTTTATTGTATGAGGAATTAATGATACCGAAAACGTTCTTTTTTCATCATTTACATCTATTACTGTCAAACTTGCTCCGTCTATCGTTATTCTCCCTTTTTCTACAATATATTGCATGTATTTTTTATCTTTTTCTTCTAAATAAAATACATAAATTTTTGCTATCCCTTTAGAAATAATTGATAAAATTTCAGCTTCACAGTCTACATCACCCATAACAAGATGTCCTCCAAGAAATGTGGATAATGTTACGGATTTTTCAAGATTTACTTTTTCTCCTGTTTTCAGTCTTTTCAGTCCGCTCCTTTTTATCGTCTCAAACATTACGTCAGCAGTAAAAGTATTTTTACTGAAAGAAGTTACTGTAAGACACACTCCGTTTACAGCTATACTGTCGCCTCTCTCAACTTTTTCAGCTACATTGTTTCCTTTTATCGTTATCTCCATTCCTAAAGGCTTTTTCAAAACATTAATAACTTCTCCCGGTCCTTCTATTAATCCTGTAAACATATTTTCTCCTAACTTTCATCATACTTTTTGAAATAAAACTCTACTCCTATATTATTATCATAGATATTATATTTTATATTATTCAAAGTTATTGCTTCATCAGTATTTATTTTTGTAAATCCTGAAATGAATGATTTTGCTGTTTTGTCTCCAAATATTTTATTGGAAATAAAAATTTCTCCTCCATCAATAACTTTTTCGGAAAAAGCCTTCGATATGAGTTTTTCTCCTCCTTCAAGCAATACCGAGTCGATTCCTTCTTTTCCTATTTCCTCCAAAATATCCCTCATAAGAAAATTTTTTCCTTTTAAAAAAATAAATTTTAATTTTTTTCTCTCTTTAAATATTTTGACTTTATCACTATTCTTGTTTATAACAGAAGTAACAATTACAGTTTTCCCATCGCTGTTATTTTTTATAATATTGTAATCTTCAGTTATTCTTAAATTCGGATCGATTATTATTCTGAAAGGATCGACTCCGTTTTCTATTCTTGCCGTCAAACTCGGATTATCATATAAAACTGTATTTATCCCTACCATTATTCCCATAAATTTATTTCTGTAATATTGAACTTTTTCTCTTGCTTTTTCATTAGTTATCCATTTAGACTCACCGTTTGAAAGAGCTATTTTTCCGTCCAGAGTTATACCGCATTTTAAAAATAAATAAGGAATTTTTGATTTTATATACTTAAAAAAGACTTGATTTAACTCATCACATTCTTTTTTCAAAACATTTTCGGTTACTTCTATCCCTGAATTTTTAAGCATTTCAATTCCTTTTCCTGCAACTTCTGGATTAGGGTCACCCGAACCTATAACACACCTTTTTATTCCTGCTTTTATAATCTTTTCAGCACAGGGAGGTGTTTTTCCGTAATGAGAACAAGGCTCCAGAGTTACATAGATAGTAGCACTTTCTGTCTCTTCTCCTGCATTTTCAATGGCATGAACTTCTGCGTGAGCTTCTCCGAACATTTTATGATAGCCCTCTCCTATAATTTTGCCGTCTTTCACTATAACAGCTCCTACCAGAGGATTGGGATTTACCCTCCCCAATCCTTTTTTTGCAAGTTCCAAAGCTATTTTCATATATTTGACATCTTCATTGTTAACATTATAGTCCTTTTCATTAATTTTTTTATTCATAATCTTTTCTATCTTTCTATAATTTTAATTTTTATACTATTTCTTTCATCAGATTTGCCATTTCAATCGCTGCAAATGCCGCTTCCGAACCTTTATTTCCTGCCTTTGTTCCTGCTCTTTCTATTGCTTCCTCTATATTATTCGTAGTCAATACTCCGAATATAACAGGAATATCGTATTGTAAAGATAATTGAGCAACACCTTTGGATACCTCTGCACAAACATAATCAAAATGAGGTGTAGATCCTTTTATTACCGCTCCGAGAGTTATTATTGCATCATATTTTTTTGCATTTATCATCTTTTTGACTATAAGAGGTATTTCAAATGCTCCCGGTACCCAAGCAATTTCGATACTTTCTTCAAGAACTTCATTTCTCTTAAGTACATCCGTTGCACCTTCGACTAATTTTGAAGTAATAAATTCGTTAAACCTTCCTGCTACAATACCGATTTTTAAATCTTTTCCATTAAACTTCCCTTCAAATTTTTTCATTTTTCCTCCCAAAATAATTTTATTTAAAACAATTTTCAGGTAATAAAAAACAGGATTAATTAAAATCCCGGGACTTTTAATAATATAATAACAGTTTTTTATTCAGAATTACTTTAACCAATTTAATCAGGAAATTTTTTAAATAACAAACTGCCTGATTAATTATATATAATTCGGATATTTTTAATAATTCCTGCTTTTAATAAAAATTTCAACTCAAAAATGGGTTATTTATAAGCACGATTATTTCTAACAAAAATAACTATTATTTATATTCTAACTTCTTCCATCTAGACTTTACTATCGGTACCGGAATTTAACCGGTTCATGCTCATAAAAGCTCGCGGACTATACCGCCGGTCGGGAATTTCACCCTGCCCTGAAGTTTAATTGTTTTATGACAATATTCTATAATATTTTTCGGATTTTGTCAAAAAAATGTATATACAGGGACGGAGTAAAATTTTTAGGAGTAAAAAATCATTGATAATATTCAAATTCCATAGGATCTAAAGGCTTTCCGTCAATCATTATCTCAAAATGCAAATGCGGTCCTGTAGACATTCCTGTGCTTCCTACGTTTCCGAGTATATACCCTTGTGAAACTATTTCTCCCTTTTCCACCGATATTTTACTTAAGTGAGCATATCTCGTTACAATACCTTTTTCCGAAGTAACTTCTACCATTTTTCCGTAATTTCCTTTTTCTCCTGAATAAGTGACGATACCTTTTACAGCCGACCTCACTTCAGCTCCGAATTTTTCTCCGATATCTATTCCTCTGTGAAATTTTCTCTCTTTCAAAATAGGATGTATTCTTTCTCCGTATTTACTTGTTATATTTTGAGAGCCTACAGGCCAATAAAACTTTTCTGATATTCCCTGACTTTTAATATCTTCTCTTTCATAGTTATCAATCCTTGTATTATATTTTGTGTAATATATTGCCGAATTTCTATTTTCATTCTTTGCGTATGCTTTTCTCGCAGCACTCTCGTTTCTGATCGAGATAATATTTCTCTTTGCTTCTCTCTCGATTTTCTCTCCAATAGAAATCTTTAAATCTTTCTGTTCTGTTTCTTCTTGAATTTTATTATCTTTTAATTTTTCCGTTTCCTCATGAAGTGAATTTTTCACATTTTCTCTTGTATTATTACTTTCCGTTTTATATACATTCTGCTTTTTTGAAGTTGCATAAATATTCTCTGTGTGACTTGTTTGAAATATAAAAACCATAAGAAACACGGCAATTAAGCCGATAAATACAATCGTGTTTTTATTTTCAATATTCTTAAATTTTTCTGAAAATTTTGACTTCTTACAGAAATTTTCTTTATACCCCTCTATTTTCTTGATCAACCCCAT

Protein sequences of DBSCAN-SWA_5

>NZ_AP019822|2013442:2020611|2017607_2018693_-|WP_026738180.1|DBSCAN-SWA
MKIALELAKKGLGRVNPNPLVGAVIVKDGKIIGEGYHKMFGEAHAEVHAIENAGEETESATIYVTLEPCSHYGKTPPCAEKIIKAGIKRCVIGSGDPNPEVAGKGIEMLKNSGIEVTENVLKKECDELNQVFFKYIKSKIPYLFLKCGITLDGKIALSNGESKWITNEKAREKVQYYRNKFMGIMVGINTVLYDNPSLTARIENGVDPFRIIIDPNLRITEDYNIIKNNSDGKTVIVTSVINKNSDKVKIFKERKKLKFIFLKGKNFLMRDILEEIGKEGIDSVLLEGGEKLISKAFSEKVIDGGEIFISNKIFGDKTAKSFISGFTKINTDEAITLNNIKYNIYDNNIGVEFYFKKYDES
>NZ_AP019822|2013442:2020611|2018781_2019246_-|WP_026738181.1|DBSCAN-SWA
MKKFEGKFNGKDLKIGIVAGRFNEFITSKLVEGATDVLKRNEVLEESIEIAWVPGAFEIPLIVKKMINAKKYDAIITLGAVIKGSTPHFDYVCAEVSKGVAQLSLQYDIPVIFGVLTTNNIEEAIERAGTKAGNKGSEAAFAAIEMANLMKEIV
>NZ_AP019822|2013442:2020611|2019726_2020611_-|WP_051411789.1|DBSCAN-SWA
MGLIKKIEGYKENFCKKSKFSEKFKNIENKNTIVFIGLIAVFLMVFIFQTSHTENIYATSKKQNVYKTESNNTRENVKNSLHEETEKLKDNKIQEETEQKDLKISIGEKIEREAKRNIISIRNESAARKAYAKNENRNSAIYYTKYNTRIDNYEREDIKSQGISEKFYWPVGSQNITSKYGERIHPILKERKFHRGIDIGEKFGAEVRSAVKGIVTYSGEKGNYGKMVEVTSEKGIVTRYAHLSKISVEKGEIVSQGYILGNVGSTGMSTGPHLHFEIMIDGKPLDPMEFEYYQ
>NZ_AP019822|2013442:2020611|2015692_2016904_-|WP_026738178.1|DBSCAN-SWA
MDSKFNTIEEALEDIKKGKVIVIVDDEDRENEGDLFLPAQSATYKMINFMINKARGLMCVPLSRRRAEELELGPMNRVNTDHHETAFTTSVDAYEGTVTGISVADRLKTITDLGNLEKKAKDFRKPGHIFPLIAKEKGVLERKGHTEAAVDLSRIAGFSEVGVIMEILNEDGTMARRDELFEFCTKYNLKIITIDDLILYRKNNEKLVKKEAEVNIFTKFGNFDFVGYSDKIENKEYIAVIKGDIRNKENVSVRLHSECLTGDVFGSKRCDCQEQLHRSLKEIEEKGEGLLIYLRQEGRGIGIINKLKAYKLQDEGYDTVEANHQLGFQEDLRDYAVAAQIIKDLKVKSISLKTNNPLKIEGLKKYGIKVVAREAIEIKFNEFDKKYLKTKKEKMGHIFIQEL
>NZ_AP019822|2013442:2020611|2013442_2015389_-|WP_026738177.1|DBSCAN-SWA
MGYIKILDESVSNIIAAGEVVENPASMIKEMIENSLDAKATIIKIEVFKGGMDVKINDNGIGMDKDDTLLSIERHATSKISTKDDVFNLNTYGFRGEALASIAAVSKLTITTRSENSSTGYKIASYGGVVRKFEEVSRNIGTEIEVRDLFYNTPARKKFLRKESTEYNKIKDIVLKEALANSDVAFTLEFDGKQSINTSGKGIENAILELFGKSVLRNLKKFEYGYLGNVEILRSSKDYIFTYVNKRYVKSNTIERAVIDGYYTKLMKGKYPFVIIFFDIDPKEIDVNVHPSKKIVKFSNDKIVYKQIKDAIDEYFYQSDREGWQPNIDLLKKSINVENKEEKIKDLFSDEVIKGESQKFFSFETHDGDFSAGNKIQERTLEEIIGSNAENNEIKENKEIESSRLLHDTDDYIIEEMNKNEKVFEKSDKIKEELEIKEESIRETGNDYKVGTFEKHTGEQFTYDVLGQIFDTYILVRKNNELEIYDQHIIHERILYEELKEKFSSKEHKSQHLLLPQKMEVSEVEKSLIFDNIEVFNEFGFDIDEFSNNEIVFRAVPAFDFRDSIQNVFLKLLSDLKSESEIKDLRENIIISMSCKGAVKAGQKLNMNEMQNMVRRLHEVGKYTCPHGRPIIVKLTKDDLDKMFGRKK
>NZ_AP019822|2013442:2020611|2016927_2017599_-|WP_026738179.1|DBSCAN-SWA
MFTGLIEGPGEVINVLKKPLGMEITIKGNNVAEKVERGDSIAVNGVCLTVTSFSKNTFTADVMFETIKRSGLKRLKTGEKVNLEKSVTLSTFLGGHLVMGDVDCEAEILSIISKGIAKIYVFYLEEKDKKYMQYIVEKGRITIDGASLTVIDVNDEKRTFSVSLIPHTIKNIILGGKKSGDFVNVETDLFGKYVEKILKFSEYEKEQNRKSKITPEFLRENGF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026738177.1|2013442_2015389_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.3e-59	28.6
WP_026738178.1|2015692_2016904_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.0e-102	50.4
WP_026738179.1|2016927_2017599_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-26	36.3
WP_026738180.1|2017607_2018693_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.1e-47	35.9
WP_026738181.1|2018781_2019246_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.2e-40	55.3
WP_051411789.1|2019726_2020611_-	M23 family metallopeptidase	A8ATH6	Listeria_phage	6.9e-19	39.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage
NZ_AP019822.1|WP_026737672.1|1253542_1254139_+|hypothetical-protein	1253542_1254139_+	198 aa aa	89	NA	NA	No	NA

Protein sequences of NZ_AP019822.1|WP_026737672.1|1253542_1254139_+|hypothetical-protein

>NZ_AP019822.1|WP_026737672.1|1253542_1254139_+|hypothetical-protein
MYIENVKIISLQDLLEELKDKELVIDILKKFRSKYNKDVEDFLHTKAIEFENSGLSSTHLVFDENFILLGFFSLANKPLLVSEKNYKLLTKNQRKKLCQNGKKLLSDGYIVNSYLLGQLGKNYSEEINENNQISGMQLLTLAYDTLMEAKKIINVRYVWLECEDKEKLLSFYKTFGFEEIENFTSVNNLKVLIMKLKK

gnl|BL_ORD_ID|89 information

• hit_Aca_id: gnl|BL_ORD_ID|89
• identity: 0.4635416666666667
• query_coverage: 0.9545454545454546
• hit_coverage: 0.9792746113989638