CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019845	Leptotrichia trevisanii strain JMUB4039	8 crisprs	csa3,PD-DExK,DinG,cas13a,DEDDh,RT,cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2,WYL,cas10,csx10gr5,csm3gr7,csx20,csx1	3	8	8	2

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019845_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_1

618726-618901

TypeVI-A

Consensus_repeat	Method
ATATGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATC	PILER-CR

2 spacers

cas13a

The CRISPR arrays of NZ_AP019845_1

>merge|NZ_AP019845|1|618726-618901|PILER-CR
ATATATTTCAGTACTTTTCATTTTTGGGGTACTCTAAATCTGATTCAAGGAACTCATAAGACGGGATATAAGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATCAATAATATTCTAGAAATGTCATATTGCACATATGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATC

>NZ_AP019845|1|1|618726-618901|PILER-CR
ATATATTTCAGTACTTTTCATTTTTGGGGTACTCTAAATC	TGATTCAAGGAACTCATAAGACGGGAT
ATAAGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATC	AATAATATTCTAGAAATGTCATATTGCAC
ATATGTTTTAGTCCCCTTCATTTTTGGGGTACTCTAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_172618279.1\|618203_618434_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377437
NZ_AP019845.1\|WP_146998212.1\|626441_627155_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|223876
NZ_AP019845.1\|WP_146998203.1\|607632_608373_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_AP019845.1\|WP_146998211.1\|624163_624931_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_AP019845.1\|WP_026745616.1\|625113_625524_+\|DUF4870-domain-containing-protein	unknown	unknown	gnl\|CDD\|378240
NZ_AP019845.1\|WP_146998213.1\|627191_628883_-\|FTR1-family-protein	unknown	unknown	gnl\|CDD\|272930
NZ_AP019845.1\|WP_146998210.1\|623470_623653_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_AP019845.1\|WP_146996106.1\|607158_607527_-\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_AP019845.1\|WP_146998208.1\|619156_622663_-\|hypothetical-protein	cas13a	cas13a_c2c2_CAS-VI-A	unknown
NZ_AP019845.1\|WP_146996110.1\|626244_626439_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|237837
NZ_AP019845.1\|WP_026748232.1\|628860_630099_-\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NZ_AP019845.1\|WP_146998204.1\|609227_609587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998206.1\|610629_613911_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224000
NZ_AP019845.1\|WP_026749342.1\|608513_609149_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_AP019845.1\|WP_146998205.1\|609615_610536_-\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_AP019845.1\|WP_172618365.1\|617811_618237_+\|transposase	unknown	unknown	gnl\|CDD\|377437
NZ_AP019845.1\|WP_026749337.1\|623893_624100_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|377143
NZ_AP019845.1\|WP_146998209.1\|622692_623109_-\|antitoxin-HicB	unknown	unknown	gnl\|CDD\|374224
NZ_AP019845.1\|WP_146998207.1\|613894_617005_-\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_172618299.1\|617269_617815_+\|transposase-zinc-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379554

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_172618279.1\|618203_618434_+\|hypothetical-protein	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	0.000586843
NZ_AP019845.1\|WP_146998212.1\|626441_627155_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|223876	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion].	2.24316e-57
NZ_AP019845.1\|WP_026749337.1\|623893_624100_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|377143	pfam03840, SecG, Preprotein translocase SecG subunit.	0.0035247
NZ_AP019845.1\|WP_146998211.1\|624163_624931_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	1.74816e-144
NZ_AP019845.1\|WP_026745616.1\|625113_625524_+\|DUF4870-domain-containing-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	0.00276529
NZ_AP019845.1\|WP_146998213.1\|627191_628883_-\|FTR1-family-protein	gnl\|CDD\|272930	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. [Unknown function, General].	2.06116e-35
NZ_AP019845.1\|WP_146996106.1\|607158_607527_-\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	2.8245e-08
NZ_AP019845.1\|WP_146998210.1\|623470_623653_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	7.74562e-12
NZ_AP019845.1\|WP_146996110.1\|626244_626439_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|237837	PRK14861, tatA, twin arginine translocase protein A; Provisional.	1.14677e-14
NZ_AP019845.1\|WP_026748232.1\|628860_630099_-\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	9.71632e-161
NZ_AP019845.1\|WP_146998203.1\|607632_608373_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.10001e-14
NZ_AP019845.1\|WP_026749342.1\|608513_609149_-\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	1.22854e-50
NZ_AP019845.1\|WP_146998205.1\|609615_610536_-\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	8.86179e-161
NZ_AP019845.1\|WP_172618365.1\|617811_618237_+\|transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	5.70596e-11
NZ_AP019845.1\|WP_146998206.1\|610629_613911_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	4.45192e-62
NZ_AP019845.1\|WP_146998209.1\|622692_623109_-\|antitoxin-HicB	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	0.000202533
NZ_AP019845.1\|WP_172618299.1\|617269_617815_+\|transposase-zinc-binding-domain-containing-protein	gnl\|CDD\|379554	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain. This domain is likely to be a zinc-binding domain. It is found at the N-terminus of transposases belonging to the IS91 family.	1.04031e-21

>NZ_AP019845.1|WP_172618279.1|618203_618434_+|hypothetical-protein
MPSETFVSHILIHLPPKNFKMVNRYGFYSRHISGRLKEAIDAFRKNIAVSRYSFYQRQMYRTFGMNPFTVQHARLK
>NZ_AP019845.1|WP_172618365.1|617811_618237_+|transposase
MKWNPHVHAIVSLGGFNKNLEFRKMRYFNVDTIAGQWKYHVLKIIENGSYPNRKIEKAAKNTAAKLYKENKRFFFNVGDGNINSTKGIIKYLGRYLARAPIAEYKITDITDKEVTFFFNDLANDKRKLALLCLLRHLFPIF
>NZ_AP019845.1|WP_172618299.1|617269_617815_+|transposase-zinc-binding-domain-containing-protein
MINITQNKLKYIFSNNNILLDSLKFCKKNNIGNSHLEYIKLSIDKFLACRDISKGFVKFKCPHCPVTHLFPITCKSKLCPSCGYKYSRTWTENIQKHILNIEHRHVLFTVPQECRKFFFYDRSLLSKLSAAVNQVFKFIFHNISRKRKRKNKISGHSRYYFTDSDIVHYGLISVIHTFGRT
>NZ_AP019845.1|WP_146998207.1|613894_617005_-|PD-(D/E)XK-nuclease-family-protein
MKISYKGIGSDLKNILFKEFEKNENTLFIFENSASFFEIKREFLQNEEIQQKLGIFQNFKMMNSYDFYENVFVTDKIVVKEEKQVVLFYNALTEKLKKDMKVNNYYDIIDVAYNYYNLFAELQEYKIDLEKIELEKWQVETFGTLVEIDNEMKKVVQRKGLILPYMLRNVENISDNFLNKFSKICFVNKVKITPFEKDLIGEIENRGIAVENILQLSENDFNEEKLKIKDSFSLPDKNEFWENFGTNIEIFEYENKFSQLLGLVKKLDEIEVLNNKTKNEIKENYDNKKEIKLKNDKYFQNEKITADTKIIQNMKNINRKKIEDLKKDENYVNYKIYDLQDNGEDGKKDYQLLRQEKISSNLELTMQKTKIYKILELICNILENVKIIGKKLENADFDSEIEKNNNNIEHTENENLKLSDIGMEENFENVKFIKNYGQSLKIRMKDLYTAFKSNDFLKIFGLKKSYDFFMEIVGQDYKYISRDEIFKIAEKLNSRIAGTADSEIAELINFIDEIEMIFDYQTLEEYGDYLEMIFDRSGEIDKDVRDKYFEALSEMVVLEDFSFDNLWKGFFNENEISASLLKLFLKYLDKKAISLNLEESDEQDSENISRYSINSFSAISETQKENLIFLNIQDTFPKININNYLFTKIQRAKIGLPVSDDEKQIEIFKFYQNILGAKNVYLSYVKNLDENIDSAGVVEEIKLKYGIETQKNKIEENDELDFIKKYFLENVEKPWESRKIGKFIPTKLKKDLDKIKAEKVSLGYYSFEEMQNFEYGYYLKKMIGNTEVEKIEDKVDNLMFGNIIHGLYERIVMENKELLEQKKFVINKEKIKETLKNILNSLEYKIPKEYLEFYKKVSFEEIVKSVEKILQKLMKTLENEEEIEIYSEERIKLKSEKEIYENIFINGMIDLHIKLKNKEILYDYKSGILKNKKGEEKKEKVVNAFKQLDYYSVMLPEKNGKEIERFVVDVWDGDIIGDTREKDEDFLNEEDIREVVKKYYETDYYDIGDVRDVQNYTYQTFKDVCRREDELNGESK
>NZ_AP019845.1|WP_146998206.1|610629_613911_-|UvrD-helicase-domain-containing-protein
MEKASNINNKEQNKIILKASAGTGKTYRLSLEYIANLIRGVNYKNIVVMTFTKKATAEIKERIYDFLYQIAFEKYDWIGLENSLKELYGFSDSKILKENLQDIYFEMIKNKDEIRIYTIDGFTNRIFKNTIAPYFGIYNYETIDKEEDEFYNDILIKIIGNSYYFEKFKFILNEEKDRKNISTYVKIVKSLLDMQEKFLLAGDNYKEANLILRNNKSSRSFVENFENIFENVKKIAEIKGKKVTEILNGKFTDIFKKFEELNQNNFDISAVQDKKIKLILEKSDDIFAKGNIWNGKKTGGKDVKELLDEMKEEQDILRETVSNYIFNEEVLPTDRKIKELAKIIFDIAEQTKLSTKRFTHTDISTYTYKFIFDKELGFVKTDNNNSNAVTEDFLELIGGQIDTIMIDEFQDTSILQWKILELLLSSAKNIICVGDEKQSIYNWRGGEKELFENLENLIGGNVQNLEKSYRSYKQIIENVNKIFTNYNENWKYTNSLYRDDEDYQRGYFGYYFQERKSRYGDEEEKPEKAYEEMIRNLREGKIQNFGKSCIICRGNRELSEITARLNEEKIPFTLESNSSILDYRAVKPLYKLIKFFVYHNFIYLLEFMRSDLIGCLNDHVKYLVENKELIEKYITKNIELSNKNLRNKNSFEYFVENLENFEEKENLLEYKNIDFMERNGLSFSETLKKIKELYKLSVNLNDKYLKDNFSKKIIQDFDVTSFYSTNSDIKNIFQFFNILKEFDNLYEFVVHIEDEKDNLRQISSSDGNAINLMTIHKSKGLEFDTIIYYRKGKTGGNNFKTFETYFDYDDNFASVTNFLITFSKYAKNVKNIKEYGIIAEKNVQKEKMEEINADYVALTRAKKNLLLYFEAYITKNGYSDDLVNKLIDVYDENTEFGIGKITETERKIHQISENSNENTELCENKINNKILKTYFSDDKFKIKKSSITLEKEFKRKKGLAMHYYFEHILNDLKNDKLIAKSALLSRYGNMLGKKIVEELIVRMEKFIEKNKNIYDKKYKVYTEFEIYDSDGKKRIIDRINIDEENKKIYIYDYKTGFEPETNEKYQEQINEYRDILSKKVSTDYEIDVKLLEV
>NZ_AP019845.1|WP_146998205.1|609615_610536_-|manganese-dependent-inorganic-pyrophosphatase
MSILVFGHKNPDTDTICSAIAYAELKNKLGKDVKAVRLGEINEETKYALNYFKAEKPELVENVAGKEIILVDHNERTQTAEGFEEAKILELIDHHRISNFNVDEPLYARVEPVGCTATIILKLFKENNLVPSKETAGLMLSAIISDTLLFKSPTCTECDVKAGKKLAEIAGINADEYGLEMLKAGTALGDKSEAELLNMDMKIFEIDGAKIGVAQVNTVNEAEVLERKEKLLAEIDNIITKDGLKFFMLAITNILSNDSVALVSGDGNDVIEKAFGEKVDSNLVTLKGVVSRKKQIIPPLTKAIQG
>NZ_AP019845.1|WP_146998204.1|609227_609587_-|hypothetical-protein
MAIVKFKKREELKILFAIKLPMIISELYKEVRNKKTANEIIRNSLNMTKNRVINTLELVDGFGNQFSVLVIYDNILEEKELLKYNMEIEDIDFRILEFDFNGKMEIEEMITHVKRLYNK
>NZ_AP019845.1|WP_026749342.1|608513_609149_-|peptidylprolyl-isomerase
MKKKMVVLVSILMLLMATVVNAKEKKSKEEKKFEKIMQSFQLEAVIKTTKGDISFYLYPEAAPKNVANFVFLAKNNFYNGLTFFRVIPNGLVQGGDPAGNGTGTTGYFLPDEFTKWLTFDVEGILAMANSGPNTNSSQFFITMQPMKNLNGKHTVIGGTKNREDLSVLRTLRQDDKILNIDIKGKKVDKFLDYFPDEVSEWESKLKKPENN
>NZ_AP019845.1|WP_146998203.1|607632_608373_-|methyltransferase-domain-containing-protein
MHKEFAEIYDIFMKYVNYDEWYKFLRMFIKKNGTVLDLGCGTGEFIWRFLRDEFSVVGVDLSEKMLEMSEKKLLKKNFANNYKLVKENIVNYENINENNDIQQVDYIICNFDTVNYLKNEKEFLKFIEKCNQNLKKNGYLIFDAVTEDIFEEIFENDIFLDEEPEYTSIWRHEQLSENKHLIEIDLFIRENENDNLFRKYNEVQHKFIYEPEWIVETVQNNGFEVFDTASNLEFGESRIFFVLKKL
>NZ_AP019845.1|WP_146996106.1|607158_607527_-|AtpZ/AtpI-family-protein
MELEDKKEIFEKENEIADEEKTAQTEEEKRKQKIFEIEKKLGRHNNEKELKNKRNNKLMKYFALATNMVYILALPILIMLGFYLLLKRYLFKTDQPLVLIIFLIIGAVSGYWSLIKQVNNIK
>NZ_AP019845.1|WP_146998208.1|619156_622663_-|hypothetical-protein
MKITKIDGISHKKYIKEGKLVKSTSEENKTDERLSELLTIRLDTYIKNPDNASEEENRIRRENLKEFFSNKVLHLKDGILYLKDRREKNQLQNKNYSEEDISEYDLKNKNSFLVLKKILLNGDINSEELEIFRNDFEKKLDKINSLKYSLEENKANYQKINENNIEKVEGKSKRNIFYNYYKDSAKRNDYINNIQEAFDKLYKKEDIENLFFLIENSKKNEKYKIRECYHKIIGRKNDKENFATIIYEEIQNVNNMKELIEKVPNVSELKKSQIFYKYYLNKEKLNDENIKYVFCHFVEIEMSKLLKNYVYKKPSNISNDKVKRIFEYQSLKKLIENKLLNKLDTYVRNCGKYSFYLQDGEIATSDFIVGNRQNEAFLRNIIGVSSTAYFSLRNILETENENDITGRIKGKTVKNKKGEEKYISGEIDKLYDNNKQNEVKKNLKMFYSYDFNMDSKNEIEDFFSNIDEAISSIRHGIVHFNLELEGKDIFTFKNIVPSQISKKMFHDEINEKKLKLKIFKQLNSANVFRYLEKYKILNYLNRTRFEFVNKNIPFVPSFTKLYSRIDDLKNSLCIYWKIPKANDNNKTKEITDAQIYLLKNIYYGEFLNYFMSNNGNFFEITKEIIELNKNDKRNLKTGFYKLQKFENLQEKTPKEYLANIQSLYMINAGNQDEEEKDTYIDFIQKIFLKGFMTYLANNGRLSLIYIGNDEQINTSLAGKKQEFDKFLKKYEQNNNIEIPHEINEFVREIKLGKILKYTESLNMFYLILKLLNHKELTNLKGSLEKYQSANKEEAFSDQLELINLLNLDNNRVTEDFELEADEIGKFLDFNGNKVKDNKELKKFDTNKIYFDGENIIKHRAFYNIKKYGMLNLLEKISDKAKYKISIEELKNYSNKKNEIEKNHTTQENLHRKYARPRKDEKFTDEDYKKYEKAIRNIQQYTHLKNKVEFNELNLLQSLLLRILHRLVGYTSIWERDLRFRLKGEFTENQYIEEIFNFDNSKNVKYKNGQIVEKYINFYKELYKDDTEKISIYSDKKVKELKKEKKDLYIRNYIAHFNYIPNAEISLLEMLENLRKLLSYDRKLKNAIMKSIVDILKEYGFVVTFKIEKDKKIRIESLKSEEVVHLKKLKLKDNDKKKEPIKTYRNSKELCKLVKVMFEYKMKEKKSEN
>NZ_AP019845.1|WP_146998209.1|622692_623109_-|antitoxin-HicB
MDVFYPAVITKEDGIYYSCLVDFDKFEDGSINYYATFGDNMEKAVSNLRETLGLHLADLLDVRKNFPEPSKVEDIKLKENQYLYIISVDPVYEVAKVTNALKKKTLTIPAWLDILAQEKNLNFSQILQKALKKELGIE
>NZ_AP019845.1|WP_146998210.1|623470_623653_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSYRKIEKRFRKLGGKVVRIRGSHYQWMIPGVKGVVTVQYSKDIPVGTLRSIEKQVGIKL
>NZ_AP019845.1|WP_026749337.1|623893_624100_-|preprotein-translocase-subunit-SecG
MLENLLIIALVILSIIMISVILLQPDRSQGLAKSSANILDEEKEGIEKFTEVVATLFLVVAILFQIVR
>NZ_AP019845.1|WP_146998211.1|624163_624931_-|triose-phosphate-isomerase
MRKVIVAGNWKMNKTAKEAAQFFNELKPLVADVKNAGIVIGAPFTALETATRETAGSNIKIAAENMNAKESGAYTGEVSPLMLKDLGVEYVILGHSERREYYHETDEIINEKVKSALAHDLKPILCFGETLEERESGTTNDVVKTQITGGLKDVTAAEMANVVLAYEPVWAIGTGKTATPEQAQEVHAFIRGLLTDLYGKEVAENVTVQYGGSMNDANAADLIAQTDIDGGLVGGASLIPEKFAVIIKAGDAAAK
>NZ_AP019845.1|WP_026745616.1|625113_625524_+|DUF4870-domain-containing-protein
MDNNIGEKKSIAGLRAYAAAFLINLSFFAGFRIEAASFPIKLSFSMGFSLLIPIIALILEQENGFVRAYAKQTLAVTVLLLISTFLNIIIVAGNILFFVIFVILSVFQIIATVSSALKKEFKIPFIEKITDLLFVD
>NZ_AP019845.1|WP_146996110.1|626244_626439_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGIFRDIGAPGLIVLILGALLIFGPKRLPELGEAIGKMIREFKKSVSGIDLEKDDKTTEDKKRR
>NZ_AP019845.1|WP_146998212.1|626441_627155_-|twin-arginine-translocase-subunit-TatC
MSKIDEQTIIEHLSEFRKRLIVTIIFFIIAFLISLVFCSSIYKLLTASFNQKLVVLGPNDILSIYLMLAGICAFSLTLPFASYQIWAFVRPALEEREAKVVLSYVPTTFILFIAGLCFGFFFVTPALLNVLLSFGDDLFNIQLTANSYLTFIIHTSLPLGIIFELPVIVAFLTSLHILTPQYLIKNRRYGYFILLVLAVVLTPADFISDLTMAAPLILLYEASILVCKYIYNKRRND
>NZ_AP019845.1|WP_146998213.1|627191_628883_-|FTR1-family-protein
MGRNYLNKISIMLFLCFMIFFTNAIAKENYSELYIKITDTTTAIRNNNQNEAKKLFSEIKEEFKKAKNSDSTQGKKVQELLNREKSALSEDDLREVTTALLAFEKEQNPVNDNEEKKKFQSRMYPALEVLEKAIQSKDVELMKKEYLKFNGVWTRNESFIRSRSISYYGKVETAMSFLRSSMEVEPFDYDSTVNSFNELKSAIQDYLDGKKIENNISSTITLKETVDMLKDALDAFKTGDKAKGQLKVKQFIQVWPTVEGDVSTRNSALYTKVETQTPIIMVKGAEKKYQEQLQGLITELSQIDTKAQYTFVDAMFILLREGVEALLIVLALVSSLKAANQKKGLRWVYTGAATGILASVIIAFVLQALFPAVSSGTNREILEGFVGIFAVIMMIGIGFWLHSKSSLKSWKDYIDRKMDIVLSTGSFISMFALSFLAVFREGAETILFYAGILPLISLQNLIIGIVSAILILVVIAFVLIYASSKIKIHQIFLVLTWTIYFLAFKMLGTSIHMLQVVGILPLHVVNFIPTVEILGIYANMEVFICQLILITIIAFATFKRKDK
>NZ_AP019845.1|WP_026748232.1|628860_630099_-|deferrochelatase/peroxidase-EfeB
MSDENDKKWFDKKISRRDFLKKAGMVGAGAAIGASGAGAIFANMFSGKTNQIVGNEEISFYGKHQPGIATPVQKNVYFAVLDLHSTDKEEIKQMFKDWTDYSEKLMKGELIAPELKNHLVPPIDTGETVGLNPYRLTVTFGISPSFLDKLKLDNKKLDEFKDLPHFPRDQIKDKYKGGDICIQACADDAQVAFHAVRNLVRKGRALINLKWTQAGFLPIGNGRETPRNLFGFKDGTENPKNNDDFKNVVWYDKNNWLKNGTFMIVRRIQMHLETWDRTNLQEQENTFGRYKESGAPFGETDEFATIDINKKGSDGKPILPIDSHVYLAKKADVKIARRAFSYSNGIDEVSGQFDAGLLFICFQKHPEQFIKIQNSLGNEDKLNEYITHVGTGIFACFGGIKKGEYIGQKLFE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_2

623331-623424

TypeVI-A

Consensus_repeat	Method
CCTTCATTTTTGGGGTGCTCTAAATC	CRISPRCasFinder

1 spacers

cas13a

The CRISPR arrays of NZ_AP019845_2

>merge|NZ_AP019845|2|623331-623424|CRISPRCasFinder
CCTTCATTTTTGGGGTGCTCTAAATCAATATCATGGAACACTTTTTATATGATATTTGGTTTTAGTCCCCTTCATTTTTGGGGTGCTCTAAATC

>NZ_AP019845|2|1|623331-623424|CRISPRCasFinder
CCTTCATTTTTGGGGTGCTCTAAATC	AATATCATGGAACACTTTTTATATGATATTTGGTTTTAGTCC
CCTTCATTTTTGGGGTGCTCTAAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_172618279.1\|618203_618434_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377437
NZ_AP019845.1\|WP_146998212.1\|626441_627155_-\|twin-arginine-translocase-subunit-TatC	unknown	unknown	gnl\|CDD\|223876
NZ_AP019845.1\|WP_026749337.1\|623893_624100_-\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|377143
NZ_AP019845.1\|WP_146998211.1\|624163_624931_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_AP019845.1\|WP_172618300.1\|631404_632571_-\|transposase	unknown	unknown	gnl\|CDD\|377437
NZ_AP019845.1\|WP_026748232.1\|628860_630099_-\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NZ_AP019845.1\|WP_146998213.1\|627191_628883_-\|FTR1-family-protein	unknown	unknown	gnl\|CDD\|272930
NZ_AP019845.1\|WP_026745616.1\|625113_625524_+\|DUF4870-domain-containing-protein	unknown	unknown	gnl\|CDD\|378240
NZ_AP019845.1\|WP_146998210.1\|623470_623653_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_AP019845.1\|WP_146998208.1\|619156_622663_-\|hypothetical-protein	cas13a	cas13a_c2c2_CAS-VI-A	unknown
NZ_AP019845.1\|WP_146996110.1\|626244_626439_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|237837
NZ_AP019845.1\|WP_146998204.1\|609227_609587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998206.1\|610629_613911_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224000
NZ_AP019845.1\|WP_026749342.1\|608513_609149_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|238194
NZ_AP019845.1\|WP_146998205.1\|609615_610536_-\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_AP019845.1\|WP_026748233.1\|630225_631107_-\|EfeM/EfeO-family-lipoprotein	unknown	unknown	gnl\|CDD\|271139
NZ_AP019845.1\|WP_172618365.1\|617811_618237_+\|transposase	unknown	unknown	gnl\|CDD\|377437
NZ_AP019845.1\|WP_146998209.1\|622692_623109_-\|antitoxin-HicB	unknown	unknown	gnl\|CDD\|374224
NZ_AP019845.1\|WP_146998207.1\|613894_617005_-\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_172618299.1\|617269_617815_+\|transposase-zinc-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379554

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_172618279.1\|618203_618434_+\|hypothetical-protein	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	0.000586843
NZ_AP019845.1\|WP_146998212.1\|626441_627155_-\|twin-arginine-translocase-subunit-TatC	gnl\|CDD\|223876	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion].	2.24316e-57
NZ_AP019845.1\|WP_026749337.1\|623893_624100_-\|preprotein-translocase-subunit-SecG	gnl\|CDD\|377143	pfam03840, SecG, Preprotein translocase SecG subunit.	0.0035247
NZ_AP019845.1\|WP_146998205.1\|609615_610536_-\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	8.86179e-161
NZ_AP019845.1\|WP_172618300.1\|631404_632571_-\|transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	3.523e-29
NZ_AP019845.1\|WP_146998213.1\|627191_628883_-\|FTR1-family-protein	gnl\|CDD\|272930	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. [Unknown function, General].	2.06116e-35
NZ_AP019845.1\|WP_146998210.1\|623470_623653_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	7.74562e-12
NZ_AP019845.1\|WP_026745616.1\|625113_625524_+\|DUF4870-domain-containing-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	0.00276529
NZ_AP019845.1\|WP_146996110.1\|626244_626439_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|237837	PRK14861, tatA, twin arginine translocase protein A; Provisional.	1.14677e-14
NZ_AP019845.1\|WP_026748232.1\|628860_630099_-\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	9.71632e-161
NZ_AP019845.1\|WP_146998206.1\|610629_613911_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|224000	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair].	4.45192e-62
NZ_AP019845.1\|WP_026749342.1\|608513_609149_-\|peptidylprolyl-isomerase	gnl\|CDD\|238194	cd00317, cyclophilin, cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic, bacterial and archeal proteins which exhibit a peptidylprolyl cis- trans isomerases activity (PPIase, Rotamase) and in addition bind the immunosuppressive drug cyclosporin (CsA). Immunosuppression in vertebrates is believed to be the result of the cyclophilin A-cyclosporin protein drug complex binding to and inhibiting the protein-phosphatase calcineurin. PPIase is an enzyme which accelerates protein folding by catalyzing the cis-trans isomerization of the peptide bonds preceding proline residues. Cyclophilins are a diverse family in terms of function and have been implicated in protein folding processes which depend on catalytic /chaperone-like activities. This group contains human cyclophilin 40, a co-chaperone of the hsp90 chaperone system; human cyclophilin A, a chaperone in the HIV-1 infectious process and; human cyclophilin H, a component of the U4/U6 snRNP, whose isomerization or chaperoning activities may play a role in RNA splicing. .	1.22854e-50
NZ_AP019845.1\|WP_146998211.1\|624163_624931_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	1.74816e-144
NZ_AP019845.1\|WP_026748233.1\|630225_631107_-\|EfeM/EfeO-family-lipoprotein	gnl\|CDD\|271139	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon. This family includes the EfeO domain, an essential component of the EfeUOB operon which is highly conserved in bacteria. However, its biochemical function is unknown. EfeO contains an N-terminal cupredoxin (CUP)-like domain and C-terminal imelysin-like domain that may bind iron. Algp7, a member of EfeO family protein from Sphingomonas sp. A1, is found to bind alginate at neutral pH, but does not contain the CUP domain, thus having a role that does not seem to be related to iron uptake. Some members of this family are fused to an N-terminal putative EfeU ion permease domain. The imelysin-like domain of this family also contains the GxHxxE sequence motif and a highly conserved functional site, suggesting a similar role to other imelysin family proteins containing the same motif.	6.46719e-101
NZ_AP019845.1\|WP_172618365.1\|617811_618237_+\|transposase	gnl\|CDD\|377437	pfam04986, Y2_Tnp, Putative transposase. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases IS1294 and IS801. This is a rolling-circle transposase.	5.70596e-11
NZ_AP019845.1\|WP_146998209.1\|622692_623109_-\|antitoxin-HicB	gnl\|CDD\|374224	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system. This is a family of HicB-like antitoxins.	0.000202533
NZ_AP019845.1\|WP_172618299.1\|617269_617815_+\|transposase-zinc-binding-domain-containing-protein	gnl\|CDD\|379554	pfam14319, Zn_Tnp_IS91, Transposase zinc-binding domain. This domain is likely to be a zinc-binding domain. It is found at the N-terminus of transposases belonging to the IS91 family.	1.04031e-21

>NZ_AP019845.1|WP_146998209.1|622692_623109_-|antitoxin-HicB
MDVFYPAVITKEDGIYYSCLVDFDKFEDGSINYYATFGDNMEKAVSNLRETLGLHLADLLDVRKNFPEPSKVEDIKLKENQYLYIISVDPVYEVAKVTNALKKKTLTIPAWLDILAQEKNLNFSQILQKALKKELGIE
>NZ_AP019845.1|WP_146998208.1|619156_622663_-|hypothetical-protein
MKITKIDGISHKKYIKEGKLVKSTSEENKTDERLSELLTIRLDTYIKNPDNASEEENRIRRENLKEFFSNKVLHLKDGILYLKDRREKNQLQNKNYSEEDISEYDLKNKNSFLVLKKILLNGDINSEELEIFRNDFEKKLDKINSLKYSLEENKANYQKINENNIEKVEGKSKRNIFYNYYKDSAKRNDYINNIQEAFDKLYKKEDIENLFFLIENSKKNEKYKIRECYHKIIGRKNDKENFATIIYEEIQNVNNMKELIEKVPNVSELKKSQIFYKYYLNKEKLNDENIKYVFCHFVEIEMSKLLKNYVYKKPSNISNDKVKRIFEYQSLKKLIENKLLNKLDTYVRNCGKYSFYLQDGEIATSDFIVGNRQNEAFLRNIIGVSSTAYFSLRNILETENENDITGRIKGKTVKNKKGEEKYISGEIDKLYDNNKQNEVKKNLKMFYSYDFNMDSKNEIEDFFSNIDEAISSIRHGIVHFNLELEGKDIFTFKNIVPSQISKKMFHDEINEKKLKLKIFKQLNSANVFRYLEKYKILNYLNRTRFEFVNKNIPFVPSFTKLYSRIDDLKNSLCIYWKIPKANDNNKTKEITDAQIYLLKNIYYGEFLNYFMSNNGNFFEITKEIIELNKNDKRNLKTGFYKLQKFENLQEKTPKEYLANIQSLYMINAGNQDEEEKDTYIDFIQKIFLKGFMTYLANNGRLSLIYIGNDEQINTSLAGKKQEFDKFLKKYEQNNNIEIPHEINEFVREIKLGKILKYTESLNMFYLILKLLNHKELTNLKGSLEKYQSANKEEAFSDQLELINLLNLDNNRVTEDFELEADEIGKFLDFNGNKVKDNKELKKFDTNKIYFDGENIIKHRAFYNIKKYGMLNLLEKISDKAKYKISIEELKNYSNKKNEIEKNHTTQENLHRKYARPRKDEKFTDEDYKKYEKAIRNIQQYTHLKNKVEFNELNLLQSLLLRILHRLVGYTSIWERDLRFRLKGEFTENQYIEEIFNFDNSKNVKYKNGQIVEKYINFYKELYKDDTEKISIYSDKKVKELKKEKKDLYIRNYIAHFNYIPNAEISLLEMLENLRKLLSYDRKLKNAIMKSIVDILKEYGFVVTFKIEKDKKIRIESLKSEEVVHLKKLKLKDNDKKKEPIKTYRNSKELCKLVKVMFEYKMKEKKSEN
>NZ_AP019845.1|WP_172618279.1|618203_618434_+|hypothetical-protein
MPSETFVSHILIHLPPKNFKMVNRYGFYSRHISGRLKEAIDAFRKNIAVSRYSFYQRQMYRTFGMNPFTVQHARLK
>NZ_AP019845.1|WP_172618365.1|617811_618237_+|transposase
MKWNPHVHAIVSLGGFNKNLEFRKMRYFNVDTIAGQWKYHVLKIIENGSYPNRKIEKAAKNTAAKLYKENKRFFFNVGDGNINSTKGIIKYLGRYLARAPIAEYKITDITDKEVTFFFNDLANDKRKLALLCLLRHLFPIF
>NZ_AP019845.1|WP_172618299.1|617269_617815_+|transposase-zinc-binding-domain-containing-protein
MINITQNKLKYIFSNNNILLDSLKFCKKNNIGNSHLEYIKLSIDKFLACRDISKGFVKFKCPHCPVTHLFPITCKSKLCPSCGYKYSRTWTENIQKHILNIEHRHVLFTVPQECRKFFFYDRSLLSKLSAAVNQVFKFIFHNISRKRKRKNKISGHSRYYFTDSDIVHYGLISVIHTFGRT
>NZ_AP019845.1|WP_146998207.1|613894_617005_-|PD-(D/E)XK-nuclease-family-protein
MKISYKGIGSDLKNILFKEFEKNENTLFIFENSASFFEIKREFLQNEEIQQKLGIFQNFKMMNSYDFYENVFVTDKIVVKEEKQVVLFYNALTEKLKKDMKVNNYYDIIDVAYNYYNLFAELQEYKIDLEKIELEKWQVETFGTLVEIDNEMKKVVQRKGLILPYMLRNVENISDNFLNKFSKICFVNKVKITPFEKDLIGEIENRGIAVENILQLSENDFNEEKLKIKDSFSLPDKNEFWENFGTNIEIFEYENKFSQLLGLVKKLDEIEVLNNKTKNEIKENYDNKKEIKLKNDKYFQNEKITADTKIIQNMKNINRKKIEDLKKDENYVNYKIYDLQDNGEDGKKDYQLLRQEKISSNLELTMQKTKIYKILELICNILENVKIIGKKLENADFDSEIEKNNNNIEHTENENLKLSDIGMEENFENVKFIKNYGQSLKIRMKDLYTAFKSNDFLKIFGLKKSYDFFMEIVGQDYKYISRDEIFKIAEKLNSRIAGTADSEIAELINFIDEIEMIFDYQTLEEYGDYLEMIFDRSGEIDKDVRDKYFEALSEMVVLEDFSFDNLWKGFFNENEISASLLKLFLKYLDKKAISLNLEESDEQDSENISRYSINSFSAISETQKENLIFLNIQDTFPKININNYLFTKIQRAKIGLPVSDDEKQIEIFKFYQNILGAKNVYLSYVKNLDENIDSAGVVEEIKLKYGIETQKNKIEENDELDFIKKYFLENVEKPWESRKIGKFIPTKLKKDLDKIKAEKVSLGYYSFEEMQNFEYGYYLKKMIGNTEVEKIEDKVDNLMFGNIIHGLYERIVMENKELLEQKKFVINKEKIKETLKNILNSLEYKIPKEYLEFYKKVSFEEIVKSVEKILQKLMKTLENEEEIEIYSEERIKLKSEKEIYENIFINGMIDLHIKLKNKEILYDYKSGILKNKKGEEKKEKVVNAFKQLDYYSVMLPEKNGKEIERFVVDVWDGDIIGDTREKDEDFLNEEDIREVVKKYYETDYYDIGDVRDVQNYTYQTFKDVCRREDELNGESK
>NZ_AP019845.1|WP_146998206.1|610629_613911_-|UvrD-helicase-domain-containing-protein
MEKASNINNKEQNKIILKASAGTGKTYRLSLEYIANLIRGVNYKNIVVMTFTKKATAEIKERIYDFLYQIAFEKYDWIGLENSLKELYGFSDSKILKENLQDIYFEMIKNKDEIRIYTIDGFTNRIFKNTIAPYFGIYNYETIDKEEDEFYNDILIKIIGNSYYFEKFKFILNEEKDRKNISTYVKIVKSLLDMQEKFLLAGDNYKEANLILRNNKSSRSFVENFENIFENVKKIAEIKGKKVTEILNGKFTDIFKKFEELNQNNFDISAVQDKKIKLILEKSDDIFAKGNIWNGKKTGGKDVKELLDEMKEEQDILRETVSNYIFNEEVLPTDRKIKELAKIIFDIAEQTKLSTKRFTHTDISTYTYKFIFDKELGFVKTDNNNSNAVTEDFLELIGGQIDTIMIDEFQDTSILQWKILELLLSSAKNIICVGDEKQSIYNWRGGEKELFENLENLIGGNVQNLEKSYRSYKQIIENVNKIFTNYNENWKYTNSLYRDDEDYQRGYFGYYFQERKSRYGDEEEKPEKAYEEMIRNLREGKIQNFGKSCIICRGNRELSEITARLNEEKIPFTLESNSSILDYRAVKPLYKLIKFFVYHNFIYLLEFMRSDLIGCLNDHVKYLVENKELIEKYITKNIELSNKNLRNKNSFEYFVENLENFEEKENLLEYKNIDFMERNGLSFSETLKKIKELYKLSVNLNDKYLKDNFSKKIIQDFDVTSFYSTNSDIKNIFQFFNILKEFDNLYEFVVHIEDEKDNLRQISSSDGNAINLMTIHKSKGLEFDTIIYYRKGKTGGNNFKTFETYFDYDDNFASVTNFLITFSKYAKNVKNIKEYGIIAEKNVQKEKMEEINADYVALTRAKKNLLLYFEAYITKNGYSDDLVNKLIDVYDENTEFGIGKITETERKIHQISENSNENTELCENKINNKILKTYFSDDKFKIKKSSITLEKEFKRKKGLAMHYYFEHILNDLKNDKLIAKSALLSRYGNMLGKKIVEELIVRMEKFIEKNKNIYDKKYKVYTEFEIYDSDGKKRIIDRINIDEENKKIYIYDYKTGFEPETNEKYQEQINEYRDILSKKVSTDYEIDVKLLEV
>NZ_AP019845.1|WP_146998205.1|609615_610536_-|manganese-dependent-inorganic-pyrophosphatase
MSILVFGHKNPDTDTICSAIAYAELKNKLGKDVKAVRLGEINEETKYALNYFKAEKPELVENVAGKEIILVDHNERTQTAEGFEEAKILELIDHHRISNFNVDEPLYARVEPVGCTATIILKLFKENNLVPSKETAGLMLSAIISDTLLFKSPTCTECDVKAGKKLAEIAGINADEYGLEMLKAGTALGDKSEAELLNMDMKIFEIDGAKIGVAQVNTVNEAEVLERKEKLLAEIDNIITKDGLKFFMLAITNILSNDSVALVSGDGNDVIEKAFGEKVDSNLVTLKGVVSRKKQIIPPLTKAIQG
>NZ_AP019845.1|WP_146998204.1|609227_609587_-|hypothetical-protein
MAIVKFKKREELKILFAIKLPMIISELYKEVRNKKTANEIIRNSLNMTKNRVINTLELVDGFGNQFSVLVIYDNILEEKELLKYNMEIEDIDFRILEFDFNGKMEIEEMITHVKRLYNK
>NZ_AP019845.1|WP_026749342.1|608513_609149_-|peptidylprolyl-isomerase
MKKKMVVLVSILMLLMATVVNAKEKKSKEEKKFEKIMQSFQLEAVIKTTKGDISFYLYPEAAPKNVANFVFLAKNNFYNGLTFFRVIPNGLVQGGDPAGNGTGTTGYFLPDEFTKWLTFDVEGILAMANSGPNTNSSQFFITMQPMKNLNGKHTVIGGTKNREDLSVLRTLRQDDKILNIDIKGKKVDKFLDYFPDEVSEWESKLKKPENN
>NZ_AP019845.1|WP_146998210.1|623470_623653_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MSYRKIEKRFRKLGGKVVRIRGSHYQWMIPGVKGVVTVQYSKDIPVGTLRSIEKQVGIKL
>NZ_AP019845.1|WP_026749337.1|623893_624100_-|preprotein-translocase-subunit-SecG
MLENLLIIALVILSIIMISVILLQPDRSQGLAKSSANILDEEKEGIEKFTEVVATLFLVVAILFQIVR
>NZ_AP019845.1|WP_146998211.1|624163_624931_-|triose-phosphate-isomerase
MRKVIVAGNWKMNKTAKEAAQFFNELKPLVADVKNAGIVIGAPFTALETATRETAGSNIKIAAENMNAKESGAYTGEVSPLMLKDLGVEYVILGHSERREYYHETDEIINEKVKSALAHDLKPILCFGETLEERESGTTNDVVKTQITGGLKDVTAAEMANVVLAYEPVWAIGTGKTATPEQAQEVHAFIRGLLTDLYGKEVAENVTVQYGGSMNDANAADLIAQTDIDGGLVGGASLIPEKFAVIIKAGDAAAK
>NZ_AP019845.1|WP_026745616.1|625113_625524_+|DUF4870-domain-containing-protein
MDNNIGEKKSIAGLRAYAAAFLINLSFFAGFRIEAASFPIKLSFSMGFSLLIPIIALILEQENGFVRAYAKQTLAVTVLLLISTFLNIIIVAGNILFFVIFVILSVFQIIATVSSALKKEFKIPFIEKITDLLFVD
>NZ_AP019845.1|WP_146996110.1|626244_626439_-|twin-arginine-translocase-TatA/TatE-family-subunit
MGIFRDIGAPGLIVLILGALLIFGPKRLPELGEAIGKMIREFKKSVSGIDLEKDDKTTEDKKRR
>NZ_AP019845.1|WP_146998212.1|626441_627155_-|twin-arginine-translocase-subunit-TatC
MSKIDEQTIIEHLSEFRKRLIVTIIFFIIAFLISLVFCSSIYKLLTASFNQKLVVLGPNDILSIYLMLAGICAFSLTLPFASYQIWAFVRPALEEREAKVVLSYVPTTFILFIAGLCFGFFFVTPALLNVLLSFGDDLFNIQLTANSYLTFIIHTSLPLGIIFELPVIVAFLTSLHILTPQYLIKNRRYGYFILLVLAVVLTPADFISDLTMAAPLILLYEASILVCKYIYNKRRND
>NZ_AP019845.1|WP_146998213.1|627191_628883_-|FTR1-family-protein
MGRNYLNKISIMLFLCFMIFFTNAIAKENYSELYIKITDTTTAIRNNNQNEAKKLFSEIKEEFKKAKNSDSTQGKKVQELLNREKSALSEDDLREVTTALLAFEKEQNPVNDNEEKKKFQSRMYPALEVLEKAIQSKDVELMKKEYLKFNGVWTRNESFIRSRSISYYGKVETAMSFLRSSMEVEPFDYDSTVNSFNELKSAIQDYLDGKKIENNISSTITLKETVDMLKDALDAFKTGDKAKGQLKVKQFIQVWPTVEGDVSTRNSALYTKVETQTPIIMVKGAEKKYQEQLQGLITELSQIDTKAQYTFVDAMFILLREGVEALLIVLALVSSLKAANQKKGLRWVYTGAATGILASVIIAFVLQALFPAVSSGTNREILEGFVGIFAVIMMIGIGFWLHSKSSLKSWKDYIDRKMDIVLSTGSFISMFALSFLAVFREGAETILFYAGILPLISLQNLIIGIVSAILILVVIAFVLIYASSKIKIHQIFLVLTWTIYFLAFKMLGTSIHMLQVVGILPLHVVNFIPTVEILGIYANMEVFICQLILITIIAFATFKRKDK
>NZ_AP019845.1|WP_026748232.1|628860_630099_-|deferrochelatase/peroxidase-EfeB
MSDENDKKWFDKKISRRDFLKKAGMVGAGAAIGASGAGAIFANMFSGKTNQIVGNEEISFYGKHQPGIATPVQKNVYFAVLDLHSTDKEEIKQMFKDWTDYSEKLMKGELIAPELKNHLVPPIDTGETVGLNPYRLTVTFGISPSFLDKLKLDNKKLDEFKDLPHFPRDQIKDKYKGGDICIQACADDAQVAFHAVRNLVRKGRALINLKWTQAGFLPIGNGRETPRNLFGFKDGTENPKNNDDFKNVVWYDKNNWLKNGTFMIVRRIQMHLETWDRTNLQEQENTFGRYKESGAPFGETDEFATIDINKKGSDGKPILPIDSHVYLAKKADVKIARRAFSYSNGIDEVSGQFDAGLLFICFQKHPEQFIKIQNSLGNEDKLNEYITHVGTGIFACFGGIKKGEYIGQKLFE
>NZ_AP019845.1|WP_026748233.1|630225_631107_-|EfeM/EfeO-family-lipoprotein
MKKMGVLLLIGALVLISCGKSNGAKEDNKAGTTAGQTTNQEKTDLSKETAEYKKYVENQIDMLLKDTENFAQLLKDGKLDEAKKVYPLIRMAYERSEPIAESFGESDIKIDYRLVDFKEEFKKEDGWKGFHRIEKILWEQNTTKGTEKYADDLVNDIKELKAKIATIEVTPDLMVTGAIDLLNEVSTQKITGEEEVFSHTDLYDFRANIEGAQKIFELFKPKLEKKDAKLVATLDSEFKTVNELLDKYMTDDKHYKLYTELTKEDTKALAEAVTKLGEPLSQMGIVIDATPKK
>NZ_AP019845.1|WP_172618300.1|631404_632571_-|transposase
MINITQNKLKYIFSNNNILLDSLKFCKKNNIGNSHLEYIKLSIDKFLACRDISKGFVKFKCPHCPVTHLFPITCKSKLCPSCGYKYSRTWTENIQKHILNIEHRHVLFTVPQECRKFFFYDRSLLSKLSAAVNQVFKFIFHNISRKRKRKNKISGHSRYYFTDSDIVHYGLISVIHTFGRDLKWNPHVHAIVSLGGFNKNLEFRKMRYFNVDTIAGQWKYHVLKIIENGSYPNRKIEKAAKNTAAKLYKENKRFFFNVGDGNINSTKGIIKYLGRYLARAPIAEYKITDITDKEVTFFFNDLANDKKKTCITMPSETFVSHILIHLPPKNFKMVNRYGFYSRHISGRLKEAIDAFRKNIAVSRYSFYQRQMYRTFGMNPFTVQHARLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_3

1100013-1101343

Unclear

Consensus_repeat	Method
ATTTACAATACAAATTGTGCTATTAAAAT	CRISPRCasFinder
ATTTACAATACAAATTGTGCTATTAAAAT	CRT
ATTTACAATACAAATTGTGCTATTAAAAT	PILER-CR

20 spacers

cas6,cas8b2,cas7,cas5,cas3,cas4,cas1,cas2

The CRISPR arrays of NZ_AP019845_3

>merge|NZ_AP019845|3|1100013-1101343|CRISPRCasFinder,CRT,PILER-CR
ACTTTAAATACAAAATGTTCTATTAAAATCACTCCCATTGATTCTGCTATTTTTTGAGCCAAAATATTTACAATACAAATTGTGCTATTAAAATCCATTGTCATTCCAGCAACGGCTATTCTCTTTATGTAATTTACAATACAAATTGTGCTATTAAAATTTAGCAATACTTTGAATAAATAATTGATTTATTTCTGATTTACAATACAAATTGTGCTATTAAAATTAATATCTTATCCAAACCTACAACAGTAATTGTTATATTTACAATACAAATTGTGCTATTAAAATGAAATATTGCAAAAACTTTGAAACAATCAAACAAAAATTTACAATACAAATTGTGCTATTAAAATATACTAATTCAATTAGTGATATAATAAATCTTGCAAAATTTACAATACAAATTGTGCTATTAAAATATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAAATTTACAATACAAATTGTGCTATTAAAATTTTCAAAAGTTCTATATCAGAAGTCGGCACAGCAAAATTTACAATACAAATTGTGCTATTAAAATATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAAATTTACAATACAAATTGTGCTATTAAAATGCAAGGCTTGGAAAAAAGCATTGGATAATCAAATATTTACAATACAAATTGTGCTATTAAAATTCCAATCTTATTCTAGTATGATATTAAAATATGAAAAATTTACAATACAAATTGTGCTATTAAAATAAAGACTTATTTTAAGAAAAGAATGGAGTGAAATAAATTTACAATACAAATTGTGCTATTAAAATTTAATAGTATATAGAATATACTAATTACTTATTATAAATTTACAATACAAATTGTGCTATTAAAATTGCAAACAATAATGTAACATAGCAACAGAATTACAAATTTACAATACAAATTGTGCTATTAAAATAAGATAAAAATGATGTTGCTGATTTAAGTAATTTAAATTTACAATACAAATTGTGCTATTAAAATGGTTAAAAAACAAGAAAAAATTGATTATAATAAATTATTTACAATACAAATTGTGCTATTAAAATGATGTTGTCATGCTGTTAATCCCATCATCTATTACATTTACAATACAAATTGTGCTATTAAAATAATGATTACAAATAAGCAATCCCTACAAGTATGGCAATTTACAATACAAATTGTGCTATTAAAATAATGATTACAAATAAGCAATCCCTACAAGTATGGCAATTTACAATACAAATTGTGCTATTAAAATCAAATAAGAAGAAAAATATTTGAAAAATAAAAAGTAATTTACAATACAAATTGTGCTATTAAAAT

>NZ_AP019845|3|2|1100013-1101343|CRISPRCasFinder
ACTTTAAATACAAAATGTTCTATTAAAAT	CACTCCCATTGATTCTGCTATTTTTTGAGCCAAAAT
ATTTACAATACAAATTGTGCTATTAAAAT	CCATTGTCATTCCAGCAACGGCTATTCTCTTTATGTA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAGCAATACTTTGAATAAATAATTGATTTATTTCTG
ATTTACAATACAAATTGTGCTATTAAAAT	TAATATCTTATCCAAACCTACAACAGTAATTGTTAT
ATTTACAATACAAATTGTGCTATTAAAAT	GAAATATTGCAAAAACTTTGAAACAATCAAACAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATACTAATTCAATTAGTGATATAATAAATCTTGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTTCAAAAGTTCTATATCAGAAGTCGGCACAGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	GCAAGGCTTGGAAAAAAGCATTGGATAATCAAAT
ATTTACAATACAAATTGTGCTATTAAAAT	TCCAATCTTATTCTAGTATGATATTAAAATATGAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAAGACTTATTTTAAGAAAAGAATGGAGTGAAATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAATAGTATATAGAATATACTAATTACTTATTATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TGCAAACAATAATGTAACATAGCAACAGAATTACAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAGATAAAAATGATGTTGCTGATTTAAGTAATTTAA
ATTTACAATACAAATTGTGCTATTAAAAT	GGTTAAAAAACAAGAAAAAATTGATTATAATAAATT
ATTTACAATACAAATTGTGCTATTAAAAT	GATGTTGTCATGCTGTTAATCCCATCATCTATTAC
ATTTACAATACAAATTGTGCTATTAAAAT	AATGATTACAAATAAGCAATCCCTACAAGTATGGCA
ATTTACAATACAAATTGTGCTATTAAAAT	AATGATTACAAATAAGCAATCCCTACAAGTATGGCA
ATTTACAATACAAATTGTGCTATTAAAAT	CAAATAAGAAGAAAAATATTTGAAAAATAAAAAGTA
ATTTACAATACAAATTGTGCTATTAAAAT

>NZ_AP019845|3|1|1100013-1101343|CRT
ACTTTAAATACAAAATGTTCTATTAAAAT	CACTCCCATTGATTCTGCTATTTTTTGAGCCAAAAT
ATTTACAATACAAATTGTGCTATTAAAAT	CCATTGTCATTCCAGCAACGGCTATTCTCTTTATGTA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAGCAATACTTTGAATAAATAATTGATTTATTTCTG
ATTTACAATACAAATTGTGCTATTAAAAT	TAATATCTTATCCAAACCTACAACAGTAATTGTTAT
ATTTACAATACAAATTGTGCTATTAAAAT	GAAATATTGCAAAAACTTTGAAACAATCAAACAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATACTAATTCAATTAGTGATATAATAAATCTTGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTTCAAAAGTTCTATATCAGAAGTCGGCACAGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	GCAAGGCTTGGAAAAAAGCATTGGATAATCAAAT
ATTTACAATACAAATTGTGCTATTAAAAT	TCCAATCTTATTCTAGTATGATATTAAAATATGAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAAGACTTATTTTAAGAAAAGAATGGAGTGAAATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAATAGTATATAGAATATACTAATTACTTATTATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TGCAAACAATAATGTAACATAGCAACAGAATTACAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAGATAAAAATGATGTTGCTGATTTAAGTAATTTAA
ATTTACAATACAAATTGTGCTATTAAAAT	GGTTAAAAAACAAGAAAAAATTGATTATAATAAATT
ATTTACAATACAAATTGTGCTATTAAAAT	GATGTTGTCATGCTGTTAATCCCATCATCTATTAC
ATTTACAATACAAATTGTGCTATTAAAAT	AATGATTACAAATAAGCAATCCCTACAAGTATGGCA
ATTTACAATACAAATTGTGCTATTAAAAT	AATGATTACAAATAAGCAATCCCTACAAGTATGGCA
ATTTACAATACAAATTGTGCTATTAAAAT	CAAATAAGAAGAAAAATATTTGAAAAATAAAAAGTA
ATTTACAATACAAATTGTGCTATTAAAAT

>NZ_AP019845|3|2|1100078-1101148|PILER-CR
ATTTACAATACAAATTGTGCTATTAAAAT	CCATTGTCATTCCAGCAACGGCTATTCTCTTTATGTA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAGCAATACTTTGAATAAATAATTGATTTATTTCTG
ATTTACAATACAAATTGTGCTATTAAAAT	TAATATCTTATCCAAACCTACAACAGTAATTGTTAT
ATTTACAATACAAATTGTGCTATTAAAAT	GAAATATTGCAAAAACTTTGAAACAATCAAACAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATACTAATTCAATTAGTGATATAATAAATCTTGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTTCAAAAGTTCTATATCAGAAGTCGGCACAGCAAA
ATTTACAATACAAATTGTGCTATTAAAAT	ATTAGAGTGTACCTGTGGCGGTAAAATGTTTAAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	GCAAGGCTTGGAAAAAAGCATTGGATAATCAAAT
ATTTACAATACAAATTGTGCTATTAAAAT	TCCAATCTTATTCTAGTATGATATTAAAATATGAAAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAAGACTTATTTTAAGAAAAGAATGGAGTGAAATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TTAATAGTATATAGAATATACTAATTACTTATTATAA
ATTTACAATACAAATTGTGCTATTAAAAT	TGCAAACAATAATGTAACATAGCAACAGAATTACAA
ATTTACAATACAAATTGTGCTATTAAAAT	AAGATAAAAATGATGTTGCTGATTTAAGTAATTTAA
ATTTACAATACAAATTGTGCTATTAAAAT	GGTTAAAAAACAAGAAAAAATTGATTATAATAAATT
ATTTACAATACAAATTGTGCTATTAAAAT	GATGTTGTCATGCTGTTAATCCCATCATCTATTAC
ATTTACAATACAAATTGTGCTATTAAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_026749132.1\|1111663_1112392_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|273654
NZ_AP019845.1\|WP_026749141.1\|1099351_1099756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998472.1\|1104285_1105182_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_AP019845.1\|WP_146998464.1\|1089952_1090138_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998468.1\|1094898_1096443_-\|flotillin-family-protein	unknown	unknown	gnl\|CDD\|225177
NZ_AP019845.1\|WP_146998476.1\|1108913_1109906_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_AP019845.1\|WP_146998475.1\|1108388_1108877_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_AP019845.1\|WP_146998465.1\|1090774_1091989_+\|saccharopine-dehydrogenase-NADP-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224662
NZ_AP019845.1\|WP_146998477.1\|1109907_1110186_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_AP019845.1\|WP_146998469.1\|1096632_1099293_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_AP019845.1\|WP_146998462.1\|1088372_1089134_-\|YARHG-domain-containing-protein	unknown	unknown	gnl\|CDD\|372555
NZ_AP019845.1\|WP_146998474.1\|1105982_1108370_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_AP019845.1\|WP_146998467.1\|1093479_1094784_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|274244
NZ_AP019845.1\|WP_146998466.1\|1092288_1093329_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380577
NZ_AP019845.1\|WP_146998461.1\|1086651_1088142_-\|4-alpha-glucanotransferase	unknown	unknown	gnl\|CDD\|237738
NZ_AP019845.1\|WP_146998473.1\|1105184_1105949_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_AP019845.1\|WP_146998478.1\|1112495_1113476_+\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240639
NZ_AP019845.1\|WP_146998471.1\|1102486_1104283_+\|CRISPR-associated-protein-Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_AP019845.1\|WP_146998463.1\|1089145_1089925_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998470.1\|1101679_1102462_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_026749132.1\|1111663_1112392_+\|HAD-IB-family-hydrolase	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	5.56734e-52
NZ_AP019845.1\|WP_146998472.1\|1104285_1105182_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.61071e-57
NZ_AP019845.1\|WP_146998461.1\|1086651_1088142_-\|4-alpha-glucanotransferase	gnl\|CDD\|237738	PRK14508, PRK14508, 4-alpha-glucanotransferase; Provisional.	0
NZ_AP019845.1\|WP_146998468.1\|1094898_1096443_-\|flotillin-family-protein	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	2.19148e-43
NZ_AP019845.1\|WP_146998476.1\|1108913_1109906_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.41539e-160
NZ_AP019845.1\|WP_146998475.1\|1108388_1108877_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.85133e-58
NZ_AP019845.1\|WP_146998473.1\|1105184_1105949_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.36788e-19
NZ_AP019845.1\|WP_146998477.1\|1109907_1110186_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.57246e-26
NZ_AP019845.1\|WP_146998469.1\|1096632_1099293_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_AP019845.1\|WP_146998474.1\|1105982_1108370_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	9.55797e-59
NZ_AP019845.1\|WP_146998467.1\|1093479_1094784_+\|thymidine-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_AP019845.1\|WP_146998466.1\|1092288_1093329_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380577	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type 1 periplasmic sugar-binding protein-like fold.	5.7711e-111
NZ_AP019845.1\|WP_146998470.1\|1101679_1102462_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.44367e-16
NZ_AP019845.1\|WP_146998465.1\|1090774_1091989_+\|saccharopine-dehydrogenase-NADP-binding-domain-containing-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	1.44673e-168
NZ_AP019845.1\|WP_146998478.1\|1112495_1113476_+\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240639	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.11193e-118
NZ_AP019845.1\|WP_146998471.1\|1102486_1104283_+\|CRISPR-associated-protein-Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.76865e-12
NZ_AP019845.1\|WP_146998462.1\|1088372_1089134_-\|YARHG-domain-containing-protein	gnl\|CDD\|372555	pfam13308, YARHG, YARHG domain. This presumed extracellular domain is about 70 amino acids in length. It is named YARHG after a conserved motif in the sequence. This domain is associated with peptidases and bacterial kinase proteins. Its molecular function is unknown.	9.41845e-15

>NZ_AP019845.1|WP_026749141.1|1099351_1099756_-|hypothetical-protein
MRKIVIDKRKSVMLVMTCILFMMTYSSLLGTPSFSRKLSVFVDENNLSHEDIRDLIVKINQIESVNNRRLTQELKKIGKRKEKEKGKQKNSLFLLFEKNQNTVFYKNSDKIPKNIGNISAFLMKKDENNLRTRE
>NZ_AP019845.1|WP_146998469.1|1096632_1099293_-|preprotein-translocase-subunit-SecA
MLKKIGEKIFGTSDEREIKKMQKLVDKINEVEPLFEKMTDEQLSHKTVEFKERLQKETLDDILVEAFATVREASKRLMGMRHYDVQLIGGMILHKGCIAEMKTGEGKTLMATLPIYLNALPGKGVHVVTVNDYLAKRDRDIMAGLFEFLGLTSGVVVGNITPDQRKTAYNCDITYGTNNEFGFDYLRDNMVGELNEKVQRGHNYVIVDEVDSILIDEARTPLIISGAAEETTEWYNTFSEVAKRLKRSYKTEEIKDKKNTVIPDEDWEDYEVDEKSHTVTITDKGIKNVERMLKIDNLYSPEYVELTHFLTQALKAKELFKLDRDYIINDDNEVIIVDEFTGRLMEGRRYSDGLHQAIEAKEKLEVAGENQTLATITLQNYFRMYEKLSGMTGTAKTEEDEFKQIYSLKVIVVPTNKPVARVDLPDVIYMNKKAKYKAIAKKIEELYHKGQPVLVGTASIQHSEEVSALLKKAKIPHEILNAKHHEREAEIIAQAGRFKTVTIATNMAGRGTDIKLGGDAESFATKVAVKGTPEYEDVHSAYVKECEEDKKKVLAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGTSEFYLSLDDDLMRLFGGDRLKSMMKMLKIDEDEEIRHKQISKSVENAQKRIESRNFSSRKSLIEYDDVNNTQREVVYEQRDAILKNENLKELIINMISDTVDDIVNSAYVGEGNGEKDFNLLSDKLHETFEYEISEELQNASADEISNKVYDDLVRIYDEKEEAIGEEIFRRIERYIMLEVLDSKWRQHLKDLTELREGIRLRSYGQRNPIHDYKIVGYDIYNEMIDAIKRETSSFILKLRVRGEEDTNNLTHEEVSNVRYEHEENEMMGDDVSARTPNEPHRPLSRRERRERERRNV
>NZ_AP019845.1|WP_146998468.1|1094898_1096443_-|flotillin-family-protein
MGFLSNNFVPILIVLIIIFILSLVGFIRVPMDRAAFISGFKRRVVTGKLAFYLRYFERVDYLDLSLFSVDVNTSVFVPTNDFINIKADAIVKLQIAQEPEILNIASKNFLNKKSEYIGESVKEVLEGNLREIIGQMNLKDMVQNRKEFNVKVQENVSPDLREMGLVVVSFAVQSFMDEKGVIDNLGIENISKISKDASIAKAQAEKEIAIAKANADKEAKDIELKVAEEIAEKTNKLEIKKADLKIESDTKKASADMTYQLETERKRKELEEVQGESNFTRETQAIKTNQAKLEAEIKVDNQIKSDAELYRKTKQAESKLIEEQREAEAILYQKTKEAEALKIMAQQEGEALKIKAQADSESIKLKAQAEAESIKLKALAEAQSKREIGLAEAEAIKAKALAEAEGIDKKADAMKKYGNAAIMEMYFKALPEISKNVAAPLNNIDKITMYGDGNTSKLVGDITKSIAQINDGITDSTGIDLKSVLAGMLGGKIISDKERLDSETENDVDAKKNK
>NZ_AP019845.1|WP_146998467.1|1093479_1094784_+|thymidine-phosphorylase
MRIVDIIQKKRDNEKLSDKELEFLLNEYLAGNVPDYQMSAFLMAVYFNDMTQEELLKFTMLMRDSGDVIKFDEINRFLVDKHSTGGVGDKVTAVLSPILSALGMGNVKLSGKGLGHTGGTIDKFESIKGFKFSTTKEELIKITNKTGIGLMGYSDNIVPLDKKLYSLRDVTATVPSIPLIASSIMSKKLAIHSDVIILDVKVGDGAFMKDLGQAKKLAERMIEIGKGAGRKVKVVLSNMDEPLGHSIGNANEIIEAIEFLKGNCADDLKEVVYTIVSLALKEKGEARDFNEAKNKIDEVINNGSALKILGEFIETSGGNKELVNNYDLLPKAKSVMEVFSENYGYVKKIKTEEIGKAAMIIGAGRAKKEDKVDHAVGINIFRKVGEKVGKNEKIAEIYYNNDKNVQESRNMILDAFVLTKEEVEKPKAILEIIE
>NZ_AP019845.1|WP_146998466.1|1092288_1093329_+|BMP-family-ABC-transporter-substrate-binding-protein
MKKILTIFSVIFALMLVVACGNKPATGEQVKDGKTSADSTNSKKAVAVVYSTGGKGDKSFNDATFRGLERAQKELGISFKEYEPKDPSTEAKNALTQFAESGEFELIIAVGYSMKDSLVAVAQAFPDQKFAIIDETVDGLPNVASILFKEHEGSFLVGALAGMMDKTGTVGFVGANESELINRFYAGYAQGARYVKPDIKVISVYIGGSNSFNDQASAKAKTETLIQQGADVIYHAAGASGLGVFQAVKEKNVYGIGVDSNQDNLYPGIILTSMMKYVDNAVFDIVKSTADGKFEAKLQTFGIKENGVGTTNFEFTKDKIGEENIKRLEQIKQDIKDGKIQVKSAL
>NZ_AP019845.1|WP_146998465.1|1090774_1091989_+|saccharopine-dehydrogenase-NADP-binding-domain-containing-protein
MGKKALVIGAGGVSNVVCHKCAQNSEVFSSIMIASRTKAKCDEIKERIEKSKYAGRIEIQTAKVDANNVPELVALINEYKPDIVINVALPYQDLTIMDACLETKTDYLDTANYEPLDTAKFEYKWQWAYKEKFEKAGITAILGSGFDPGVTGVFSAYAQKHYFDEINYIDILDANAGDHGYPFATNFNPEINIREVTANGSYWEDGKWVETEPMEIKRVYNFPQIGEKDMYLLHHEELESLALNIKGIKRIRFFMTFGQSYLTHLKVLENVGMTSIEPIEFEGKQIVPLQFLTAVLPDPASLGPRTKGKTNIGNIFRGKKDGVEKTYYVYNVCDHQECYKEVSSQAISYTTGVPAMIGAAMVLTGEWKKPGVFNVEEMNPDPFMDALNKFGLPWVEDFNPTLVD
>NZ_AP019845.1|WP_146998464.1|1089952_1090138_-|hypothetical-protein
MSKSQVHTITYPTSEEDCDKTINSYRQQIMRAYDSEDEAEYKRLNDEAEKITNHCLNLMSN
>NZ_AP019845.1|WP_146998463.1|1089145_1089925_-|hypothetical-protein
MQEREVFKFEKSGMKSKGAWTFVGFGTIALFGGGIYSFIGILMLAYGIYLLTKKSKVIVYTTGFVISEGKDLKNISFDRVLGIKGELGQKVKILYLKKPFSVYNENELNNISNNLNTLSESIIFDDELLEKDFINVFNIIKEQFKNYVFEHYNNDLEKIITSPYLFEQISNDKLNFTRTKFWGGLADEIIQLQYGDAINVTTRKKAYVTNGRGDIRQAGQSFEPQWQFASTSTKCDTINLINATIIQEILSKKYNIKFI
>NZ_AP019845.1|WP_146998462.1|1088372_1089134_-|YARHG-domain-containing-protein
MKTIFFIFTVLLILTGCGTQSETQNEKKSLGLSENELSEYTNRLRNFLKTNKDQVNQQDLLNEDGTPKITCSQKDVLLEALLTSPDAVTNGNSIPLIAGMLYAQQLKIINEAACYNSDGTITAPKKETDTTEQATSNPSEYENQNTSENSDSTSSTNKNTNDLDLEDLNNLKHEVMDNGNESAFNKYSKYQLKILRNMMFAERGVAFKKGGEMRTYFENKSWYSPTIEDQSEIQLNDYDKEFVLKLKKYEGID
>NZ_AP019845.1|WP_146998461.1|1086651_1088142_-|4-alpha-glucanotransferase
MFERSSGILLHPTSLPGKYGIGSLGKEAYKFVDFLKKANQKLWQIFPLGPTGYGDSPYQCFSTFAGNPYLIDFDLLIEQNLLTEEDLKDVDFGENEESVDYGAIYNQKYPLLRKAYENFKTNGNDDLKGKLDAFKAENSDWLNDYSLFISLKNHFNGLPWTEWPHDIKVREEAAVNKYREELADEIEYNNFIQCLFFDQWNNVKKYANDNGIKVIGDIPIFVAVDSSDAWANPEIFLFDPELKPVKVAGVPPDYFSATGQLWGNPLYDWNKLKELNYKWWVDRVRANLSTCDIIRIDHFRGFDEYWAVPFGDDTAVNGQWVKGPGIDLFNKIKEELGSLPIIAEDLGFMTQGVIDLRESTGFPGMKILGFAFDSNEENEYLPHTYTKNCVVYTGTHDNDTLMGWFTKAKEEDRQFARDYLHSQSDDEIYWDALRGAWGSVANMAIAPIQDFLGLGSEARINTPGIASGNWQWRLKDGILTDELAERIAKLTKVYSR
>NZ_AP019845.1|WP_146998470.1|1101679_1102462_+|CRISPR-associated-endoribonuclease-Cas6
MRFKINIELTEGNSFPINWRSKILCVLKTGLKKCDNEIFEEFFGSAKQKNYTWSAYFQNVKFEKDKVKFLGEEKKIIVNLSAYDNVDSLNIYNAFSGIRFKEIKISEETKVVVTNISILPRQIIKDNILIVKTMSPIVCRDHDQETKKDTYYTGTDDKFSKIIKRNLYLKLKELKGEYVKKDIEDLIIDSSQTKKVVVKHYDKTKKDKTLNYENKFNGKFLDTSVGILKLEGKSYILDYIYNAGIGSITGSGFGMLEKLK
>NZ_AP019845.1|WP_146998471.1|1102486_1104283_+|CRISPR-associated-protein-Cst1
MSNEKIELKLKDWLFNAGLIGLINILGEEARNNGELEIDDKNRLIRFSPKVLENFEYKYFDFFIKRYGKTLTYGKILEFEKYIDEFEENGEKIRSINELKMINDKITFFKAKIKSASYKKAYDFIEKDGTNKILGLEKELKKIKEPKENIDEISKDDVKNNIKIMKEIIDFFKKKITDKNGNVKNYLAAKNIAYVIINNAWSSVSFLNQKNADKDIYKEYKSYFVEPALEYVNAKSKFKYKCAISNMSMKNYRNTLGFLNDTGFDVKRKPSHVWNFVNDIAVTPLVTLVYSCVPAGFIYGADKGIFVNANHNIDQLCKINNGIAYNILEDESEEKNINLYKNLLKEIKKEKDNTKYELSDIQIVKLEEGHYKFTLLSRDILKLLSKNKERLDNLLDKCYSIEKRYTYLYDTTITELLNNENLFSLINKLCYYKISKINNTSKTKTKIKLYYKLKSIEDLLKINLDYIRRLKKMDKQEIVEKKENKKTSEELTEKDIFYIRRDAMIFREEYIRKSGNDKKIGSLLYRLQNALRINNVDMFMDALISAHAYAGKNISSLFAKALLNDENFQTLGHGFLLGLLGEDKSKNENKTDKKEGNE
>NZ_AP019845.1|WP_146998472.1|1104285_1105182_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKKKGLTFTAIFLAQSANYGEGIGNVAALKKLSRNKGEQYTYISRQAIRYNIIEQLGEEKSPVKAEGSGDKKVVQFSADTTIKDYPELDFFGYMKTIKGENSKNRSAIVRLSNAISLETFKGDLEFLTNKGLADRIGEFPNIAQAEIHKSYYKYTVTIDLDRIGIDELDEIEVSNEEKSRRVRKLLDTISLLYRDIKGRREDLKPLFIIGGVYDIKNPFFENIVDVKNNKILADKLCSGIYDYIEKDTISGIVKEQFENDTEVEEKLKGKNINVLNVPEFFKQLKEKVDNYYTEKVDG
>NZ_AP019845.1|WP_146998473.1|1105184_1105949_+|type-I-B-CRISPR-associated-protein-Cas5
MKAVKLKLYQNMVNYKVPTSFQLKESYPLPPYSTVIGMIHSLCDFKEYKPMKISISGNYFSKVNDLYTRYEFKNGNPFEMGRHQLNVNGYGINRGVATAELLVDVNLTIHIIPEDQSEEFLDIIFEAFKYPREYPSLGRREDIVLIKDVKIVDVEKKKLEKDLSNGEDDFAYIPVNFIQEKLVNYGDKKNGMNIYGTRYELTKNYILNNIGTKSKPKMIRSWEKEEVIYSSNIKGFKRREVPVDTDNEIVFCEL
>NZ_AP019845.1|WP_146998474.1|1105982_1108370_+|CRISPR-associated-helicase-Cas3'
MKNNFLAKSSGETILRHTENLFNNFMKIFMIYPKLNVEKRLLLLACIYHDLGKINQKFQSKLSGEKQSGEIPHGILSTSFINDDILIEYHHFSEDEIKILAHSVALHHERNLMEINDSDLSDEIYSMNNEVKNFSKELKILENIYFEYFKNTENYKDRKAIFNWEDGKVELAELSSLFYEIGSRVYSDVEGSETFQKYVMLKGLLNKIDYAASSYIPVEEKNDFLEEKMNAFLKNVLKKDNPENDWNELQKFMIHNRNKNVVVVAQTGYGKTEAGLLWIGNNKGFFTLPLRVAINAIFDRVKNQIVIEKLENRIGLLHSDFREIYIEDIKKKEKNNLEKMDNDELFMYMDKTKQLSLPLTVCTIDQLFDFVFRAPGFELKVATLSYSKVVIDEIQMYSTDLLAYLIYGLKYITDFGGKFAIMTATLPGIITDLLKKEEIEFVTTEPFINDKKRHNLKVLKEVINAKFIKENYKDNKILVVCNTVKKSKQIYEELKNLGIECKELNLLHSRFIKKDRAEKEKEISEFANPKRFKENVKNERELKNICENGIWIGTQVVEASLDLDFDILITELSDLNGLFQRMGRCYRNREVLDEKYNCYVFTEECSGIKSSKAVIDKEIHQKSKEVLINIDGLLTEKEKLELIDKVYSTESLKDTEYYEKLVKNIDVLKNYIQEYDNVQRIFRNIASEDVIPKIVYQENVEEIKKNIEILQKKAKGLDEEKRKNLRSEKIEARREINQFKVAIPEYEFDDISPEQVEKIEINDYETLIILDCDYSYEKGFEVKMKNQDFFEDNTF
>NZ_AP019845.1|WP_146998475.1|1108388_1108877_+|CRISPR-associated-protein-Cas4
MKITGLMINYYFVCKRKLWCQSKNINLEEENENVQLGKLIDENSYNLETKQVMIEETVNIDFIRKWQVIHEVKKSKAVEEAAIWQVKYYIYFLKRRGIKIEKGIIDYPVIRERKEIILTEEDENTLKEILTDIEKICQNEKAPPVINNKICKKCAYYEFCYV
>NZ_AP019845.1|WP_146998476.1|1108913_1109906_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MAESYFIFSNGELKRKDNVVRITAPDGRFKDIKIEVTRDIYLFGEVSLNTKCLNYLAQNKIPVHIFNYYGFYTGTFYPKESNVSGKLFVKQVENYTDNSKRIELAQLIIDAASTNILRNLRYYQERGKDLESVITEIKALKKGIFRTNEINELMGIEGSIRRTYYTAWNTIVNQEIDFEKRVKRPPDNMINTMISFLNTLVYTVCLSEIYVSQLNPTISYLHSVGDRRFSLSLDIAEVFKPLLADRIIFSLLNKKMITEKDFVKDSNYFYMKENAQKLILKTFNERLETSIKHRDLNRKVSYRHLMRLEAYKLVKHLLEDKKYEGFKIWW
>NZ_AP019845.1|WP_146998477.1|1109907_1110186_+|CRISPR-associated-endonuclease-Cas2
MYIILVYDILTDDNGPRISRNVFKICKKYLTNVQKSVFEGEITPVLLKKLNLELKRYIRKDKDSLIIFKSRQEKWLEKEFWGIEDDKTSNFF
>NZ_AP019845.1|WP_026749132.1|1111663_1112392_+|HAD-IB-family-hydrolase
MKKNVAAFFDIDGTIYRDSLLIEHFKMLVQYEYIDMMTWEGKVKEKFSKWENRTGDYDDYLDELVQTYMEALKNFSKEDMDFIAKRVMKLKGDKVYRYTRERLKYHKEKNHKVIIISGSPDFLVSKMAERYGVKDYRASTYEVNENGIFTGKVTPMWDAKSKQKAIADFCKMYEIDLTKSYAYGDTTGDLTMFKNVGNAIAINPAKKLLQKIKRDKELKEKVMIVVERKDVIYKLKADVDII
>NZ_AP019845.1|WP_146998478.1|1112495_1113476_+|3-phosphoglycerate-dehydrogenase
MDKNLKIVYLDRIIAGPIDLKERFSKYGEYIEYGDTDSGEVDERIKDVDVVITTRIKLGREQFEKAKKLKLILITATGFNHIDVKSANEFGIKVANVSGYSTNSVAQLAITFLLNELTPVNRYYEEVRDGKWMDITVPDYQKYPIDDANGKILGIVGFGNIGKRVAQVAEILGMEVIVAKNTEKDNAKTDSAIEKGGFLRYDLDEVLEKCDVLTLHVPLTDSTRNLINLEKMKKMKKSAIILNLARGPVINQEDLYFALKNKIIKSAAIDVTSIEPIEKNSKLFELDNILVTPHIAWKSEKSMVKLMDDVEENLKLFLEGRLEGLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_4

1110391-1111506

Unclear

Consensus_repeat	Method
ATTTTAATAGCACAATTTGTATTGTAAAT	CRISPRCasFinder
ATTTTAATAGCACAATTTGTATTNNGTAAAT	CRT
ATTTACAATACAAATTGTGCTATTAAAAT	PILER-CR

17 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_AP019845_4

>merge|NZ_AP019845|4|1110391-1111506|CRISPRCasFinder,CRT,PILER-CR
ATTTTAATAGCACAATTTGTATTGTAAATTATATTTATAAATATCTTGCTGTTTAAAAATACTGGATTTTAATAGCACAATTTGTATTGTAAATTTTCATTATTCAAGGCCCGTATATCGTTTTTAAGATATTTTAATAGCACAATTTGTATTGTAAATATGTTTATAGTGCTAACTGATTTGAACGTGAATGAAATTTTAATAGCACAATTTGTATTGTAAATTTATCTGTAAACGACAAGGTTTTGGTAGCATTTTGTATTTTAATAGCACAATTTGTATTGTAAATACATTTCGTGTTATAATATTATCGCCAAAACAACTTATTTTAATAGCACAATTTGTATTGTAAATGAATGATTTGCAAATTCACTTGCCAAGTCAATTCCAGATTTTAATAGCACAATTTGTATTGTAAATTCTTTAATATATTTTCTTATTAATTTTGAAATACTATTTTAATAGCACAATTTGTATTGTAAATAATGTCAATAAAAATTTCGTTTTAGATAGATTTGAAATTTTAATAGCACAATTTGTATTGTAAATCCTTAATTTCATAATTTACTATTTTAAATTTATTTTATTTTAATAGCACAATTTGTATTGTAAATTATATAAGGGACGCCTATTTAATAAAATACGGAAATATTTTAATAGCACAATTTGTATTGTAAATTAATTTTATGGGAAGAAAAAACAGGTAGACGTGAACATTTTAATAGCACAATTTGTATTGTAAATACTTTCAACACTTTTCATTTTTACCTCCTAATCCAAATTTTAATAGCACAATTTGTATTGTAAATTGCTGAATACTTCTTAAAAATTTTGACATAGCAACAATTTTAATAGCACAATTTGTATTGTAAATGCTAATGCTCTTAACTCCTCGGTAGTAAGTCCTGAAATTTTAATAGCACAATTTGTATTGTAAATTGCGTAGCGGACTAAGAACTGCTACACTAGATGTAGATTTTAATAGCACAATTTGTATTGTAAATAATTTTCTTTAGACAGCATTTCGTACATTTCCTCTAATTTTAATAGCACAATTTGTATTGTAAATTACATTTTGCCCTTGACTATTGCAAGCATAATTTGTAAATTGTAAAA

>NZ_AP019845|4|3|1110391-1111459|CRISPRCasFinder
ATTTTAATAGCACAATTTGTATTGTAAAT	TATATTTATAAATATCTTGCTGTTTAAAAATACTGG
ATTTTAATAGCACAATTTGTATTGTAAAT	TTTCATTATTCAAGGCCCGTATATCGTTTTTAAGAT
ATTTTAATAGCACAATTTGTATTGTAAAT	ATGTTTATAGTGCTAACTGATTTGAACGTGAATGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TTATCTGTAAACGACAAGGTTTTGGTAGCATTTTGT
ATTTTAATAGCACAATTTGTATTGTAAAT	ACATTTCGTGTTATAATATTATCGCCAAAACAACTT
ATTTTAATAGCACAATTTGTATTGTAAAT	GAATGATTTGCAAATTCACTTGCCAAGTCAATTCCAG
ATTTTAATAGCACAATTTGTATTGTAAAT	TCTTTAATATATTTTCTTATTAATTTTGAAATACT
ATTTTAATAGCACAATTTGTATTGTAAAT	AATGTCAATAAAAATTTCGTTTTAGATAGATTTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	CCTTAATTTCATAATTTACTATTTTAAATTTATTTT
ATTTTAATAGCACAATTTGTATTGTAAAT	TATATAAGGGACGCCTATTTAATAAAATACGGAAAT
ATTTTAATAGCACAATTTGTATTGTAAAT	TAATTTTATGGGAAGAAAAAACAGGTAGACGTGAAC
ATTTTAATAGCACAATTTGTATTGTAAAT	ACTTTCAACACTTTTCATTTTTACCTCCTAATCCAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCTGAATACTTCTTAAAAATTTTGACATAGCAACA
ATTTTAATAGCACAATTTGTATTGTAAAT	GCTAATGCTCTTAACTCCTCGGTAGTAAGTCCTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCGTAGCGGACTAAGAACTGCTACACTAGATGTAG
ATTTTAATAGCACAATTTGTATTGTAAAT	AATTTTCTTTAGACAGCATTTCGTACATTTCCTCTA
ATTTTAATAGCACAATTTGTATTGTAAAT

>NZ_AP019845|4|2|1110391-1111506|CRT
ATTTTAATAGCACAATTTGTATTGTAAAT	TATATTTATAAATATCTTGCTGTTTAAAAATACTGG
ATTTTAATAGCACAATTTGTATTGTAAAT	TTTCATTATTCAAGGCCCGTATATCGTTTTTAAGAT
ATTTTAATAGCACAATTTGTATTGTAAAT	ATGTTTATAGTGCTAACTGATTTGAACGTGAATGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TTATCTGTAAACGACAAGGTTTTGGTAGCATTTTGT
ATTTTAATAGCACAATTTGTATTGTAAAT	ACATTTCGTGTTATAATATTATCGCCAAAACAACTT
ATTTTAATAGCACAATTTGTATTGTAAAT	GAATGATTTGCAAATTCACTTGCCAAGTCAATTCCAG
ATTTTAATAGCACAATTTGTATTGTAAAT	TCTTTAATATATTTTCTTATTAATTTTGAAATACT
ATTTTAATAGCACAATTTGTATTGTAAAT	AATGTCAATAAAAATTTCGTTTTAGATAGATTTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	CCTTAATTTCATAATTTACTATTTTAAATTTATTTT
ATTTTAATAGCACAATTTGTATTGTAAAT	TATATAAGGGACGCCTATTTAATAAAATACGGAAAT
ATTTTAATAGCACAATTTGTATTGTAAAT	TAATTTTATGGGAAGAAAAAACAGGTAGACGTGAAC
ATTTTAATAGCACAATTTGTATTGTAAAT	ACTTTCAACACTTTTCATTTTTACCTCCTAATCCAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCTGAATACTTCTTAAAAATTTTGACATAGCAACA
ATTTTAATAGCACAATTTGTATTGTAAAT	GCTAATGCTCTTAACTCCTCGGTAGTAAGTCCTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCGTAGCGGACTAAGAACTGCTACACTAGATGTAG
ATTTTAATAGCACAATTTGTATTGTAAAT	AATTTTCTTTAGACAGCATTTCGTACATTTCCTCTA
ATTTTAATAGCACAATTTGTATTGTAAAT	TACATTTTGCCCTTGACT
ATTGCAAGCATAATTTGTAAATTGTAAAA

>NZ_AP019845|4|3|1110456-1111459|PILER-CR
ATTTTAATAGCACAATTTGTATTGTAAAT	TTTCATTATTCAAGGCCCGTATATCGTTTTTAAGAT
ATTTTAATAGCACAATTTGTATTGTAAAT	ATGTTTATAGTGCTAACTGATTTGAACGTGAATGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TTATCTGTAAACGACAAGGTTTTGGTAGCATTTTGT
ATTTTAATAGCACAATTTGTATTGTAAAT	ACATTTCGTGTTATAATATTATCGCCAAAACAACTT
ATTTTAATAGCACAATTTGTATTGTAAAT	GAATGATTTGCAAATTCACTTGCCAAGTCAATTCCAG
ATTTTAATAGCACAATTTGTATTGTAAAT	TCTTTAATATATTTTCTTATTAATTTTGAAATACT
ATTTTAATAGCACAATTTGTATTGTAAAT	AATGTCAATAAAAATTTCGTTTTAGATAGATTTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	CCTTAATTTCATAATTTACTATTTTAAATTTATTTT
ATTTTAATAGCACAATTTGTATTGTAAAT	TATATAAGGGACGCCTATTTAATAAAATACGGAAAT
ATTTTAATAGCACAATTTGTATTGTAAAT	TAATTTTATGGGAAGAAAAAACAGGTAGACGTGAAC
ATTTTAATAGCACAATTTGTATTGTAAAT	ACTTTCAACACTTTTCATTTTTACCTCCTAATCCAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCTGAATACTTCTTAAAAATTTTGACATAGCAACA
ATTTTAATAGCACAATTTGTATTGTAAAT	GCTAATGCTCTTAACTCCTCGGTAGTAAGTCCTGAA
ATTTTAATAGCACAATTTGTATTGTAAAT	TGCGTAGCGGACTAAGAACTGCTACACTAGATGTAG
ATTTTAATAGCACAATTTGTATTGTAAAT	AATTTTCTTTAGACAGCATTTCGTACATTTCCTCTA
ATTTTAATAGCACAATTTGTATTGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_026749141.1\|1099351_1099756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998472.1\|1104285_1105182_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_AP019845.1\|WP_146998470.1\|1101679_1102462_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_AP019845.1\|WP_146998476.1\|1108913_1109906_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|187853
NZ_AP019845.1\|WP_146998475.1\|1108388_1108877_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_AP019845.1\|WP_146998473.1\|1105184_1105949_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_AP019845.1\|WP_146998477.1\|1109907_1110186_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_AP019845.1\|WP_146998480.1\|1118667_1119399_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|377070
NZ_AP019845.1\|WP_146998469.1\|1096632_1099293_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_AP019845.1\|WP_036069918.1\|1119460_1119766_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_AP019845.1\|WP_146996454.1\|1113596_1114241_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370129
NZ_AP019845.1\|WP_146998474.1\|1105982_1108370_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_AP019845.1\|WP_146998481.1\|1120190_1120700_-\|DUF1439-domain-containing-protein	unknown	unknown	gnl\|CDD\|377799
NZ_AP019845.1\|WP_021743260.1\|1114375_1114813_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146996458.1\|1120978_1121716_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_AP019845.1\|WP_146998479.1\|1115426_1118567_+\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_AP019845.1\|WP_146998478.1\|1112495_1113476_+\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240639
NZ_AP019845.1\|WP_026749132.1\|1111663_1112392_+\|HAD-IB-family-hydrolase	unknown	unknown	gnl\|CDD\|273654
NZ_AP019845.1\|WP_146998471.1\|1102486_1104283_+\|CRISPR-associated-protein-Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187884
NZ_AP019845.1\|WP_006803784.1\|1119826_1120174_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|223299

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_146998472.1\|1104285_1105182_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.61071e-57
NZ_AP019845.1\|WP_146998470.1\|1101679_1102462_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.44367e-16
NZ_AP019845.1\|WP_146998476.1\|1108913_1109906_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.41539e-160
NZ_AP019845.1\|WP_146998475.1\|1108388_1108877_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	4.85133e-58
NZ_AP019845.1\|WP_146998473.1\|1105184_1105949_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.36788e-19
NZ_AP019845.1\|WP_146998477.1\|1109907_1110186_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.57246e-26
NZ_AP019845.1\|WP_146998480.1\|1118667_1119399_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|377070	pfam03591, AzlC, AzlC protein.	1.94039e-19
NZ_AP019845.1\|WP_146998469.1\|1096632_1099293_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_AP019845.1\|WP_036069918.1\|1119460_1119766_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	0.00107834
NZ_AP019845.1\|WP_146996454.1\|1113596_1114241_+\|hypothetical-protein	gnl\|CDD\|370129	pfam08797, HIRAN, HIRAN domain. The HIRAN domain (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. The HIRAN domain is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this domain functions as a DNA-binding domain that probably recognizes features associated with damaged DNA or stalled replication forks.	5.56733e-06
NZ_AP019845.1\|WP_146998474.1\|1105982_1108370_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	9.55797e-59
NZ_AP019845.1\|WP_146998481.1\|1120190_1120700_-\|DUF1439-domain-containing-protein	gnl\|CDD\|377799	pfam07273, DUF1439, Protein of unknown function (DUF1439). This family consists of several hypothetical bacterial proteins of around 190 residues in length. Several members of this family are annotated as being putative lipoproteins and are often known as YceB. The function of this family is unknown.	0.00969439
NZ_AP019845.1\|WP_146996458.1\|1120978_1121716_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	9.31512e-59
NZ_AP019845.1\|WP_146998479.1\|1115426_1118567_+\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_AP019845.1\|WP_146998478.1\|1112495_1113476_+\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240639	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.11193e-118
NZ_AP019845.1\|WP_026749132.1\|1111663_1112392_+\|HAD-IB-family-hydrolase	gnl\|CDD\|273654	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled here are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase (TIGR00338). Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "Phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the enzymes in this model possess PSPase activity. OMNI\|NTL01ML1250 is annotated as a "possible transferase," however this is due to the C-terminal domain found on this sequence which is homologous to a group of glycerol-phosphate acyltransferases (between trusted and noise to TIGR00530). A subset of these sequences including OMNI\|CC1962, the Caulobacter crescentus CicA protein cluster together and may represent a separate equivalog. [Unknown function, Enzymes of unknown specificity].	5.56734e-52
NZ_AP019845.1\|WP_146998471.1\|1102486_1104283_+\|CRISPR-associated-protein-Cst1	gnl\|CDD\|187884	cd09754, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.76865e-12
NZ_AP019845.1\|WP_006803784.1\|1119826_1120174_+\|inorganic-diphosphatase	gnl\|CDD\|223299	COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion].	3.80081e-22

>NZ_AP019845.1|WP_146998477.1|1109907_1110186_+|CRISPR-associated-endonuclease-Cas2
MYIILVYDILTDDNGPRISRNVFKICKKYLTNVQKSVFEGEITPVLLKKLNLELKRYIRKDKDSLIIFKSRQEKWLEKEFWGIEDDKTSNFF
>NZ_AP019845.1|WP_146998476.1|1108913_1109906_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MAESYFIFSNGELKRKDNVVRITAPDGRFKDIKIEVTRDIYLFGEVSLNTKCLNYLAQNKIPVHIFNYYGFYTGTFYPKESNVSGKLFVKQVENYTDNSKRIELAQLIIDAASTNILRNLRYYQERGKDLESVITEIKALKKGIFRTNEINELMGIEGSIRRTYYTAWNTIVNQEIDFEKRVKRPPDNMINTMISFLNTLVYTVCLSEIYVSQLNPTISYLHSVGDRRFSLSLDIAEVFKPLLADRIIFSLLNKKMITEKDFVKDSNYFYMKENAQKLILKTFNERLETSIKHRDLNRKVSYRHLMRLEAYKLVKHLLEDKKYEGFKIWW
>NZ_AP019845.1|WP_146998475.1|1108388_1108877_+|CRISPR-associated-protein-Cas4
MKITGLMINYYFVCKRKLWCQSKNINLEEENENVQLGKLIDENSYNLETKQVMIEETVNIDFIRKWQVIHEVKKSKAVEEAAIWQVKYYIYFLKRRGIKIEKGIIDYPVIRERKEIILTEEDENTLKEILTDIEKICQNEKAPPVINNKICKKCAYYEFCYV
>NZ_AP019845.1|WP_146998474.1|1105982_1108370_+|CRISPR-associated-helicase-Cas3'
MKNNFLAKSSGETILRHTENLFNNFMKIFMIYPKLNVEKRLLLLACIYHDLGKINQKFQSKLSGEKQSGEIPHGILSTSFINDDILIEYHHFSEDEIKILAHSVALHHERNLMEINDSDLSDEIYSMNNEVKNFSKELKILENIYFEYFKNTENYKDRKAIFNWEDGKVELAELSSLFYEIGSRVYSDVEGSETFQKYVMLKGLLNKIDYAASSYIPVEEKNDFLEEKMNAFLKNVLKKDNPENDWNELQKFMIHNRNKNVVVVAQTGYGKTEAGLLWIGNNKGFFTLPLRVAINAIFDRVKNQIVIEKLENRIGLLHSDFREIYIEDIKKKEKNNLEKMDNDELFMYMDKTKQLSLPLTVCTIDQLFDFVFRAPGFELKVATLSYSKVVIDEIQMYSTDLLAYLIYGLKYITDFGGKFAIMTATLPGIITDLLKKEEIEFVTTEPFINDKKRHNLKVLKEVINAKFIKENYKDNKILVVCNTVKKSKQIYEELKNLGIECKELNLLHSRFIKKDRAEKEKEISEFANPKRFKENVKNERELKNICENGIWIGTQVVEASLDLDFDILITELSDLNGLFQRMGRCYRNREVLDEKYNCYVFTEECSGIKSSKAVIDKEIHQKSKEVLINIDGLLTEKEKLELIDKVYSTESLKDTEYYEKLVKNIDVLKNYIQEYDNVQRIFRNIASEDVIPKIVYQENVEEIKKNIEILQKKAKGLDEEKRKNLRSEKIEARREINQFKVAIPEYEFDDISPEQVEKIEINDYETLIILDCDYSYEKGFEVKMKNQDFFEDNTF
>NZ_AP019845.1|WP_146998473.1|1105184_1105949_+|type-I-B-CRISPR-associated-protein-Cas5
MKAVKLKLYQNMVNYKVPTSFQLKESYPLPPYSTVIGMIHSLCDFKEYKPMKISISGNYFSKVNDLYTRYEFKNGNPFEMGRHQLNVNGYGINRGVATAELLVDVNLTIHIIPEDQSEEFLDIIFEAFKYPREYPSLGRREDIVLIKDVKIVDVEKKKLEKDLSNGEDDFAYIPVNFIQEKLVNYGDKKNGMNIYGTRYELTKNYILNNIGTKSKPKMIRSWEKEEVIYSSNIKGFKRREVPVDTDNEIVFCEL
>NZ_AP019845.1|WP_146998472.1|1104285_1105182_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKKKGLTFTAIFLAQSANYGEGIGNVAALKKLSRNKGEQYTYISRQAIRYNIIEQLGEEKSPVKAEGSGDKKVVQFSADTTIKDYPELDFFGYMKTIKGENSKNRSAIVRLSNAISLETFKGDLEFLTNKGLADRIGEFPNIAQAEIHKSYYKYTVTIDLDRIGIDELDEIEVSNEEKSRRVRKLLDTISLLYRDIKGRREDLKPLFIIGGVYDIKNPFFENIVDVKNNKILADKLCSGIYDYIEKDTISGIVKEQFENDTEVEEKLKGKNINVLNVPEFFKQLKEKVDNYYTEKVDG
>NZ_AP019845.1|WP_146998471.1|1102486_1104283_+|CRISPR-associated-protein-Cst1
MSNEKIELKLKDWLFNAGLIGLINILGEEARNNGELEIDDKNRLIRFSPKVLENFEYKYFDFFIKRYGKTLTYGKILEFEKYIDEFEENGEKIRSINELKMINDKITFFKAKIKSASYKKAYDFIEKDGTNKILGLEKELKKIKEPKENIDEISKDDVKNNIKIMKEIIDFFKKKITDKNGNVKNYLAAKNIAYVIINNAWSSVSFLNQKNADKDIYKEYKSYFVEPALEYVNAKSKFKYKCAISNMSMKNYRNTLGFLNDTGFDVKRKPSHVWNFVNDIAVTPLVTLVYSCVPAGFIYGADKGIFVNANHNIDQLCKINNGIAYNILEDESEEKNINLYKNLLKEIKKEKDNTKYELSDIQIVKLEEGHYKFTLLSRDILKLLSKNKERLDNLLDKCYSIEKRYTYLYDTTITELLNNENLFSLINKLCYYKISKINNTSKTKTKIKLYYKLKSIEDLLKINLDYIRRLKKMDKQEIVEKKENKKTSEELTEKDIFYIRRDAMIFREEYIRKSGNDKKIGSLLYRLQNALRINNVDMFMDALISAHAYAGKNISSLFAKALLNDENFQTLGHGFLLGLLGEDKSKNENKTDKKEGNE
>NZ_AP019845.1|WP_146998470.1|1101679_1102462_+|CRISPR-associated-endoribonuclease-Cas6
MRFKINIELTEGNSFPINWRSKILCVLKTGLKKCDNEIFEEFFGSAKQKNYTWSAYFQNVKFEKDKVKFLGEEKKIIVNLSAYDNVDSLNIYNAFSGIRFKEIKISEETKVVVTNISILPRQIIKDNILIVKTMSPIVCRDHDQETKKDTYYTGTDDKFSKIIKRNLYLKLKELKGEYVKKDIEDLIIDSSQTKKVVVKHYDKTKKDKTLNYENKFNGKFLDTSVGILKLEGKSYILDYIYNAGIGSITGSGFGMLEKLK
>NZ_AP019845.1|WP_026749141.1|1099351_1099756_-|hypothetical-protein
MRKIVIDKRKSVMLVMTCILFMMTYSSLLGTPSFSRKLSVFVDENNLSHEDIRDLIVKINQIESVNNRRLTQELKKIGKRKEKEKGKQKNSLFLLFEKNQNTVFYKNSDKIPKNIGNISAFLMKKDENNLRTRE
>NZ_AP019845.1|WP_146998469.1|1096632_1099293_-|preprotein-translocase-subunit-SecA
MLKKIGEKIFGTSDEREIKKMQKLVDKINEVEPLFEKMTDEQLSHKTVEFKERLQKETLDDILVEAFATVREASKRLMGMRHYDVQLIGGMILHKGCIAEMKTGEGKTLMATLPIYLNALPGKGVHVVTVNDYLAKRDRDIMAGLFEFLGLTSGVVVGNITPDQRKTAYNCDITYGTNNEFGFDYLRDNMVGELNEKVQRGHNYVIVDEVDSILIDEARTPLIISGAAEETTEWYNTFSEVAKRLKRSYKTEEIKDKKNTVIPDEDWEDYEVDEKSHTVTITDKGIKNVERMLKIDNLYSPEYVELTHFLTQALKAKELFKLDRDYIINDDNEVIIVDEFTGRLMEGRRYSDGLHQAIEAKEKLEVAGENQTLATITLQNYFRMYEKLSGMTGTAKTEEDEFKQIYSLKVIVVPTNKPVARVDLPDVIYMNKKAKYKAIAKKIEELYHKGQPVLVGTASIQHSEEVSALLKKAKIPHEILNAKHHEREAEIIAQAGRFKTVTIATNMAGRGTDIKLGGDAESFATKVAVKGTPEYEDVHSAYVKECEEDKKKVLAAGGLFILGTERHESRRIDNQLRGRAGRQGDPGTSEFYLSLDDDLMRLFGGDRLKSMMKMLKIDEDEEIRHKQISKSVENAQKRIESRNFSSRKSLIEYDDVNNTQREVVYEQRDAILKNENLKELIINMISDTVDDIVNSAYVGEGNGEKDFNLLSDKLHETFEYEISEELQNASADEISNKVYDDLVRIYDEKEEAIGEEIFRRIERYIMLEVLDSKWRQHLKDLTELREGIRLRSYGQRNPIHDYKIVGYDIYNEMIDAIKRETSSFILKLRVRGEEDTNNLTHEEVSNVRYEHEENEMMGDDVSARTPNEPHRPLSRRERRERERRNV
>NZ_AP019845.1|WP_026749132.1|1111663_1112392_+|HAD-IB-family-hydrolase
MKKNVAAFFDIDGTIYRDSLLIEHFKMLVQYEYIDMMTWEGKVKEKFSKWENRTGDYDDYLDELVQTYMEALKNFSKEDMDFIAKRVMKLKGDKVYRYTRERLKYHKEKNHKVIIISGSPDFLVSKMAERYGVKDYRASTYEVNENGIFTGKVTPMWDAKSKQKAIADFCKMYEIDLTKSYAYGDTTGDLTMFKNVGNAIAINPAKKLLQKIKRDKELKEKVMIVVERKDVIYKLKADVDII
>NZ_AP019845.1|WP_146998478.1|1112495_1113476_+|3-phosphoglycerate-dehydrogenase
MDKNLKIVYLDRIIAGPIDLKERFSKYGEYIEYGDTDSGEVDERIKDVDVVITTRIKLGREQFEKAKKLKLILITATGFNHIDVKSANEFGIKVANVSGYSTNSVAQLAITFLLNELTPVNRYYEEVRDGKWMDITVPDYQKYPIDDANGKILGIVGFGNIGKRVAQVAEILGMEVIVAKNTEKDNAKTDSAIEKGGFLRYDLDEVLEKCDVLTLHVPLTDSTRNLINLEKMKKMKKSAIILNLARGPVINQEDLYFALKNKIIKSAAIDVTSIEPIEKNSKLFELDNILVTPHIAWKSEKSMVKLMDDVEENLKLFLEGRLEGLK
>NZ_AP019845.1|WP_146996454.1|1113596_1114241_+|hypothetical-protein
MLINNFSGIKLEFDGLYYGGNYEIEIFPDGRFYYSYIENTSVELKKGSFQINQKEIMIFEEMMDYFELLKNQSNYMINEFNFGNGVLVIQKNNGREEKIRLGKEMMFEYAKTLIDKYTKKSKRLFLLDTYLEGAKYIRNFAIKIKDEVQLDLFREFNGISLNAVAVYNSKKEKVGYLPKNQSEIIARMIDAGKKFVAVPIPYDEDIALKIYLVD
>NZ_AP019845.1|WP_021743260.1|1114375_1114813_+|hypothetical-protein
MGFRLSVKGQENEILLDKESILDVKYISETPDDSNARATDLGVILEIRGKILAAANGDTEDDTRKVAQWSLVPSEASDAYRQASLEIISAGQMVRKIDMTNVFVVDYIEEYGNQAGTGTFSLKIKQKKEKVKEVAIEGGYATQEA
>NZ_AP019845.1|WP_146998479.1|1115426_1118567_+|DNA-polymerase-I
MKRAVILDTSAIMYRSHFALMGMRNSNGMSTGATFGFINTLESVIREFRPDYLVACLDVKRSELDRTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATKFSNDEDEQIEVFVITGDKDLAQLVDGKINIALLGKGDKNSAFKHIKTDEDVVEYLGVTPDKIPDLFGLMGDKSDGIPGVAGIGSKNGVKLITTYGNLEGIYENIDEIKGKQKEKLLTDKENAFISRELATIKRELDIEYDKKKLKFEEKDFDGLLKLYEELDFKRFSKAVEEEKERFLQNGNQKELTEEEKQILEKNKKINEEKLEKERLEREKIEKQELEYDKENTIFDGISHFYEHVEYEHNSEIDKKIDEIQVLKEKLVIEYEAQKKKAEEIALENQKTEKTKKTKDEKVYFEKNYGKVISWNDAYYVIEKMDKKVAIFENMLGISICDEKTNIAILDSELQDILQNGNQKNAESGAQINLFSLSNNADEKEENKKNVKNIYKLLSEKEIIAYNVKEYMKNGESEYFGYSVGGKTYGINNDRFGIKCTEYFDILLARYVLGTESLQEIEEIILDEFGVEIATFEEQFKKERRKKDFSDVSDDVICEFLSKRTFFIYKLETIFRNRLQNEQFLNIFDKLESRLIPVLAQMEETGIKIDKKYFNEFQNELEEKINMLQSDIYKLADGEFNIDSPQQLGEVLFEKLQIPSGKKTKTGYSTNVEVLEMIANNVELTEDKRMIGKKLLEYRAYKKLLSTYIEPIPKLADKEDRIHTTFNQNGTSTGRLSSANPNLQNIPVRTDDGIRIRTGFVAKEGHSLISFDYSQIELRVLAELSKDRHLVQAYQDNQDLHNLTARKIFFKTEEDEISRHERSIAKVINFSILYGKTPFGLSKELGITVQEASQYITTYFEEYPRVRKFLDIVTETAKLHGFVETFYGTRRYISGINATNKNVQAQAVRMAVNTVVQGTAANIIKKVMIELHEEFKNDENIKMLLQVHDELIFEVRDEFAKEYMKKIENIMENTVKFKKVPLKANGSVAKNWGLLK
>NZ_AP019845.1|WP_146998480.1|1118667_1119399_+|AzlC-family-ABC-transporter-permease
MAQIRKLENYLKGLKDGTGIGIAYIPFGVAIGLISAKSFSQILPMIGLTSFGMYAGGAHSLLLKVLYVMKSPPVEVILSIALINLRYLLLNIVIFRQLGEKTPVFQKFLVGVGLTDETVTYLTLKKATNAWYMMGVNTIPYFCYCFGTIFGAIFGEKLPESLMTSMNFVLYSIFFSMLIMALSQNFKYIRIVLLALIIKMAFSFLPILNKVSSGWVMILTMFLASFIYAQLYYNENPEKQEND
>NZ_AP019845.1|WP_036069918.1|1119460_1119766_+|AzlD-domain-containing-protein
MILMTLIIMTVILRTLPIFVKIPENNLKVNKFFEALPYTVLTVLVFPDIFTSTGSTNFDIIRVLIGMAIVAYLTFRKTNLGIIIIVSIAVIYFLGMLKGSF
>NZ_AP019845.1|WP_006803784.1|1119826_1120174_+|inorganic-diphosphatase
MSLDNYKKFLGQKIHVKMDRKMGERHPKYNFIYPVNYGYIPNTISEDGEEIDVYILGVFEPVDEFCGICRAIVYRYDDEENKLIVIPDGKNYTVSQMEVLVEFQERFFKHKILTE
>NZ_AP019845.1|WP_146998481.1|1120190_1120700_-|DUF1439-domain-containing-protein
MKLFKFLFFSIIILIAGLGYYIYTQNQLKIPDSMVKSAVASKFPIEKSYPLGKIKLFNPKVHFENDKLIIEAEYLNDALNDQISGTMTFATDIRYDPMKSNLYLEDFQIVRLTKENKEIDLDKKPIIRTGLNYAFSQLEKKEILNLSGVEKFQMIKDIKIENNKLTVVK
>NZ_AP019845.1|WP_146996458.1|1120978_1121716_+|ABC-transporter-permease-subunit
MEELEKTRKIVKTSFFIAVVTVAVLLAFPYDMKPKEWEIYAGSYFVTTLGLTVGGAAIGIFFGMLLAFFKFQKTKSEVVNMIKDVVIDEYVDIMRGTPMVLQLLILSVVVVIFNNYWIAVIALGLNSAAYVEETVRSGIESIDKGQMEAARATGMPYRMAMNEIIMPQAVKNILPALVNEFINLFKETSVVGYISVMDITMNSKSLQAVYYSVKPILFTGIVYYISVKLFSFIGKRLEMRLKEND

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_5

1297505-1297764

TypeIII

I-B

Consensus_repeat	Method
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAAC	PILER-CR
GTTAAAGTAAGTTATCCATTAAAACAAGG	CRISPRCasFinder
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACA	CRT

3 spacers

The CRISPR arrays of NZ_AP019845_5

>merge|NZ_AP019845|5|1297505-1297764|PILER-CR,CRISPRCasFinder,CRT
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACTCTCCTATAAAGTTGTACTTAAAGGAAGGAGAGTGGTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACAATTAATAATCGCACCTTCTTGTACTAATGTTCTTAATAGTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACAATTTTAATATCCAGCATAGACAACAGAAGTCTCAGTGTTAAAGTAAGTTATCCATTAAAACAAGGTTTAAAAAA

>NZ_AP019845|5|4|1297505-1297763|PILER-CR
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAAC	TCTCCTATAAAGTTGTACTTAAAGGAAGGAGAGTG
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAAC	AATTAATAATCGCACCTTCTTGTACTAATGTTCTTAATA
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAAC	AATTTTAATATCCAGCATAGACAACAGAAGTCTCAGT
GTTAAAGTAAGTTATCCATTAAAACAAGGTTTAAAAA

>NZ_AP019845|5|4|1297505-1297755|CRISPRCasFinder
GTTAAAGTAAGTTATCCATTAAAACAAGG	ATTGAAACTCTCCTATAAAGTTGTACTTAAAGGAAGGAGAGTG
GTTAAAGTAAGTTATCCATTAAAACAAGG	ATTGAAACAATTAATAATCGCACCTTCTTGTACTAATGTTCTTAATA
GTTAAAGTAAGTTATCCATTAAAACAAGG	ATTGAAACAATTTTAATATCCAGCATAGACAACAGAAGTCTCAGT
GTTAAAGTAAGTTATCCATTAAAACAAGG

>NZ_AP019845|5|3|1297505-1297764|CRT
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACT	CTCCTATAAAGTTGTACTTAAAGGAAGGAGAGTG
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACA	ATTAATAATCGCACCTTCTTGTACTAATGTTCTTAATA
GTTAAAGTAAGTTATCCATTAAAACAAGGATTGAAACA	ATTTTAATATCCAGCATAGACAACAGAAGTCTCAGT
GTTAAAGTAAGTTATCCATTAAAACAAGGTTTAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_146996574.1\|1305553_1306840_+\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
NZ_AP019845.1\|WP_146998574.1\|1300236_1303314_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_AP019845.1\|WP_146998570.1\|1291333_1291690_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_AP019845.1\|WP_146998573.1\|1298403_1299597_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_AP019845.1\|WP_146998572.1\|1296060_1296954_+\|homoserine-kinase	unknown	unknown	gnl\|CDD\|234920
NZ_AP019845.1\|WP_146998566.1\|1287669_1288401_+\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|377151
NZ_AP019845.1\|WP_172618337.1\|1296998_1297163_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998579.1\|1309413_1311780_+\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_AP019845.1\|WP_146998569.1\|1290357_1291293_-\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238500
NZ_AP019845.1\|WP_146998575.1\|1303336_1303705_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_AP019845.1\|WP_026748985.1\|1291954_1293547_+\|phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|237436
NZ_AP019845.1\|WP_146998578.1\|1308116_1309346_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_AP019845.1\|WP_146999394.1\|1297915_1298404_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_AP019845.1\|WP_146999395.1\|1299718_1300240_+\|DUF448-domain-containing-protein	unknown	unknown	gnl\|CDD\|225350
NZ_AP019845.1\|WP_146998571.1\|1293672_1295970_+\|autotransporter-protein	unknown	unknown	gnl\|CDD\|371915
NZ_AP019845.1\|WP_146998568.1\|1289608_1290307_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224046
NZ_AP019845.1\|WP_146998567.1\|1288723_1289566_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_AP019845.1\|WP_026748989.1\|1288460_1288655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998577.1\|1307150_1307726_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_AP019845.1\|WP_146998576.1\|1303798_1305496_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_146996574.1\|1305553_1306840_+\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	4.29122e-122
NZ_AP019845.1\|WP_146998574.1\|1300236_1303314_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_AP019845.1\|WP_146998570.1\|1291333_1291690_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	9.53106e-20
NZ_AP019845.1\|WP_146998573.1\|1298403_1299597_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	1.06386e-143
NZ_AP019845.1\|WP_146998572.1\|1296060_1296954_+\|homoserine-kinase	gnl\|CDD\|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	1.83804e-103
NZ_AP019845.1\|WP_146998566.1\|1287669_1288401_+\|peroxide-stress-protein-YaaA	gnl\|CDD\|377151	pfam03883, H2O2_YaaD, Peroxide stress protein YaaA. YaaA is a key element of the stress response to H2O2. It acts by reducing the level of intracellular iron levels after peroxide stress, thereby attenuating the Fenton reaction and the DNA damage that this would cause. The molecular mechanism of action is not known.	2.49485e-72
NZ_AP019845.1\|WP_146998571.1\|1293672_1295970_+\|autotransporter-protein	gnl\|CDD\|371915	pfam12138, Spherulin4, Spherulation-specific family 4. This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.	1.15542e-31
NZ_AP019845.1\|WP_146998579.1\|1309413_1311780_+\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_AP019845.1\|WP_146998569.1\|1290357_1291293_-\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238500	cd01018, ZntC, Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).	2.36209e-68
NZ_AP019845.1\|WP_146998575.1\|1303336_1303705_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	3.62893e-23
NZ_AP019845.1\|WP_026748985.1\|1291954_1293547_+\|phosphoglycerate-dehydrogenase	gnl\|CDD\|237436	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional.	0
NZ_AP019845.1\|WP_146998578.1\|1308116_1309346_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_AP019845.1\|WP_146999394.1\|1297915_1298404_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	1.96241e-41
NZ_AP019845.1\|WP_146999395.1\|1299718_1300240_+\|DUF448-domain-containing-protein	gnl\|CDD\|225350	COG2740, COG2740, Predicted nucleic-acid-binding protein implicated in transcription termination [Transcription].	1.20137e-09
NZ_AP019845.1\|WP_146998577.1\|1307150_1307726_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	7.82158e-134
NZ_AP019845.1\|WP_146998568.1\|1289608_1290307_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	8.44272e-71
NZ_AP019845.1\|WP_146998567.1\|1288723_1289566_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	3.46341e-48
NZ_AP019845.1\|WP_146998576.1\|1303798_1305496_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	5.72099e-133

>NZ_AP019845.1|WP_172618337.1|1296998_1297163_+|hypothetical-protein
MAIIVKKGELAKINKGMSQKGLAERCTYTVKEFPKSNLSKKAEEALNKIFSSMK
>NZ_AP019845.1|WP_146998572.1|1296060_1296954_+|homoserine-kinase
MGLKFKVKVPGTSANIGVGYDCLGVALDYFLELEVEESDKIEFLENGEPFSIPIEENLIFEAIKYTEKHLVKNIPSYKVNIVKNDIPISRGLGSSSSAIVAGILIANKFAGDVLDINEVAKLAVEMEGHPDNVVPAIFGGMVLTAHDKENLVYSSLINSDDLCFYVMIPDFKLSTEKARSVLPKMYLVSDAINNISKLGLLVNAFNKGKYDNLRFLLGDKIHQPYRFALINDSEKIFEASKKHGALGEYISGAGPTLISLNYDNEEFLENMKKELAELSDNWTIEKKKINLKGAEVY
>NZ_AP019845.1|WP_146998571.1|1293672_1295970_+|autotransporter-protein
MNKKEISYDFLEISNRCINRAVKEETFTKKIKKAGKKTNYSSAKYKLEIKKESKNRFNKKFGNIVNKKIVSDKRIIVTSLMTGIASLLNAESTETLKPSGYTVNYMANTGTDEKIDKKSNFENAENVLISQNLNKTVANNEKLDKIKVRAATKEDNIRFSFNTKFDMLLSKRNSKNGADSSNNLKSTGNTSLAPSNSSSGIGTSSTQLTPSTQTTRVINQQILIPMYKYPHLNDPYWQQVTNMGGSKIPYVVVNPASGPGTSVDSNYVRQISSNINSGIKNIAYVATGYQSRSTADIMADIDKYGSLYGISNFSGVFLDEVASGTDANARYMENVYKSIKSKYPNLMVVGNPGKSITDSIAPYSDIFVTKEVSANTYLNNYHAPTSAFENNPANANRIMHIIYGATSAQYDEIIRLSRERNVGWLYIVNDTNYNNLPTNFSSLVDNINTPLVVPVLSQNSNKLMTRVISPSASSTQVPLEAPRSKVNLDLVKNVKSSIFQNLQNTEEGKTDIDFTFIGNFSTDYKDKKSSVEYDSDSRGILISLMKNFGKFTVGGGMGYQDSKVNYKGNFEGIDEKIKSHQFILSGKYEFNENIDLTNVLTYSGNNHKFKTETGAGLMNNVKYKSRILDYTTKLGYKFSIDNGFVKPYIGLAAIRVFEDKMDKLNILESTKSGLEWLFGVYAEKTIGQFNIFGKAEYELRGKKGSYHGERKYGNYKIAPLSYSRGVFNAELGTNYRINDYVKASLGYGLADSKNSSIKLGLEASF
>NZ_AP019845.1|WP_026748985.1|1291954_1293547_+|phosphoglycerate-dehydrogenase
MYRVLVGEYIDDEAIAGLQEARDVKVDVKVGISREEILDIIGEYDALIVRSVIKVDKELLDKAKNLKIVGRAGNGTDNINIPEATAHGVIVANTPDSNTVSACEIAIGLMIASARNIVAANNFIKSGKWEREIFVGNELFEKTLGIIGLGRIGGLVATRMKAFGMKLVAYDPYISDERFKRYSCEKAKTLDELMEKADVITIHTPKTKETVDMINAENLHKLKDGVRLVNAARGGLFNEEAVAEGLRSGKITSFGYDVHTVEPRSECILYEFENAITTPHIGATTYEAQRNVGTQVVKQVLNGLRGEIVETAVNLPAIGREEFLIVKPFINLAEKLGKIYFQIEKTPITNVVLNYYGEIAEQETALVDSTAIKGILEPVLKEEVNYINSKPLAEKRGINISINKKERKYKNYSSAIEFVITNEEGKKIYVVGTIGMNNEERIISIKNHDVDMAISDNMIYLGNDDVPGVIGAVGATLGKENINIATMNVGRRENSAIMLLTVDSEVGGKSLKELRGLSQIKWAYYLDLTI
>NZ_AP019845.1|WP_146998570.1|1291333_1291690_-|transcriptional-repressor
MKLTKKRQKIFELVQASNNPVNAKFLKSQVDFDLSTVYRALEFLEKNNYIFSFDFENEKYYFKEENANFFICDSCKYIETVPEFSNEETEKEKSELKKRGFSLLSHLSIFKGKCSDCD
>NZ_AP019845.1|WP_146998569.1|1290357_1291293_-|zinc-ABC-transporter-substrate-binding-protein
MKKLLSLLLLSALFIFSCGNKSESKKEQGTTTGAKEKIVTSVPPLRWLTQKIAGDDFEVISIVQPNMNHELFEPKPSDLKILENSKVFFTYNMLGFEETISDSLSDKNKIVNVLDGVDKNLFIKGDHDHEHEHGHEHGKKEEHEHHHEHEGHGGIDPHVWFSLDMMPKIAENIKNELSKLYPDKKETFEKNYNAFITELNQVKAELSQKMASKTKKSFMIYHPALNYFLKNYAIEEISIEQEGKEPSAQQIKEIIDEAKEHNVTTILVQPQFPKQSAEAISKEIPNSKVAEFNVDKENVFENLKQFVDYLN
>NZ_AP019845.1|WP_146998568.1|1289608_1290307_-|ATP-binding-cassette-domain-containing-protein
MTNGQNKKLVSVRNLNFKYNNDYILNDINLDIFKGKNVAILGRNGGGKSTLVKVMLGFLRKNSGSIEFFASENKIGYLPQIREFDTSFPINIFDLVISGLTNKNNLFRRFNNEEKKRAEILLKEFDIFHLKNKLINEVSGGQLQRALIARALISSPELIFLDEPESFLDKEFEFKLFEKIKELSDSTIVVISHKLEKIYDYIDSIFVVEGNIRVYEKKEDYVCSNPYLHSHK
>NZ_AP019845.1|WP_146998567.1|1288723_1289566_-|metal-ABC-transporter-permease
MEFIKIFEYAFMRNALIVGLLSSICCGIIGTYIVNKKMVFISSSISHASYGGIGIGIYLIYFFNLPIKDPLFFGLIFSILSGILILVLKDTLHVDGDLGIGIVMSMGMAIGIIFAFLTPGYQSDMSTYLFGNILLSNTLNIILLLILDTITVTFFIIFYKSIVYTSFDENFYKIHSVPVTFINYFMIILISSVIIINIKTIGIILIISILTIPQAIAASLARKYSTIIILSIIFSFIGILSGLYFSYTLNIPSGPSIIVLLTILLALVKVGGLVKGKFLN
>NZ_AP019845.1|WP_026748989.1|1288460_1288655_+|hypothetical-protein
MNKLILIFLLLGVLGFSKDKTVIRDKKISEEKRKFLLKLSEQAPYKTETENLADYNYISLHFNN
>NZ_AP019845.1|WP_146998566.1|1287669_1288401_+|peroxide-stress-protein-YaaA
MKIIISPSKTKKINSLPIKDSDSLTVKEPFYLEITNEIIEKIKTFSVEEIEKKFKLKNEKAQNLLEFYKNYENEKSGNALASYTGVAYKAIKVETFDKSDFEYLESHLVILSALYGILTPYTNVKEYRLDMTNSIFESKSLYEVWKSSVNEYFEKEDIVLNLASKEYSKLINSDKLIDFEFWEDSNGKLKQVSTNSKKMRGFTLNYIVKNKISDVKKLRNITLDGYVFDEDMSDERKFVYVKK
>NZ_AP019845.1|WP_146999394.1|1297915_1298404_+|ribosome-maturation-factor-RimP
MEQILDEFEKKIESHLKRMNLELADLEYVRDGGYNYLRVYVEKLDGTTTLDDCIDFSREIDGIADDLIEEKFFLEVSTPGVERRLRKPKDFVRFLGERINVQTKSNIEGAKRFLGKLEKFEDNTIFLLDDKLAKIVEIPLSKLKKANLIYELPNGILNSEEE
>NZ_AP019845.1|WP_146998573.1|1298403_1299597_+|transcription-termination/antitermination-protein-NusA
MKGRDQKIFLEALDELEKEKGILKEELLETIETALLAAYKKNYGEKDNVKVTINRNSGDVKVYSQRLIVENVENPDEEISLEDAISVKKRAKLGDILDLEINAESFKRNAIQNAKQIVVQKVRECEKRNIFNKFKEIENSIVSANVRKTDEKGNLYVDINGLEAIVPAKELSPVDIFRQGDRIKIYIGAVEESTKFTKTFVSRKSEELLRGLLELEVPEIYEEIIEIRNIAREAGSRSKVAVYSNDKNLDVKGACIGRNGMRIQNIIDELCGEKIDVVLWNEDITEFVKNALNPAEVLSVEIIEEGEENMKVARVLVAENQLSLAIGKKGQNSRLAARLCGVKIDIHTEAAEIEKYEENTAFNDSFEGEIENVGETSDSNDDYEVEESAFAGLHEEE
>NZ_AP019845.1|WP_146999395.1|1299718_1300240_+|DUF448-domain-containing-protein
MCICCRKKGEKSDFLRIAEQDGKYVFDKEMKMQARGFYVCKTNECIERLSKHKKYNIEMEQLVQMLEEVKKQKKNIIDILKPMKNSEYFVFGIDEVFEGIKREKIKLVIIPADIKAKYIDEFEKLKKNFNFEIIFIKKKEELIRLFSRDVNVIGIFNKKVIKGILSKVEVMNG
>NZ_AP019845.1|WP_146998574.1|1300236_1303314_+|translation-initiation-factor-IF-2
MKVHELAKENGFTATKFMEEIRKFGIDKKHHMNVLSDEEVSLIRKKLQKGVQNNQNNGKTENLNKSENKTTESTKENIVKMVSSHSDSQKNNNAEHSKISEHKNINKNYEKPKQPLEKDIKLNVEKKSDNSNINKSNLNNTKNLDNNKNQKFEKPNRFDKKENNKKMEMKVNLSSQNNKANELNREKQSFQNRDSRDSKDNRENGGRNFQNRDNRNREDRKEGFRKEGRDNFRRDNRNFNKDGNNQTRDNRDNRGFQNRDRDNQSGSRNFQSRDNRNREDRKEGFRKEGRDNFRRDNRNFNKDGNNQARDSRDNRGFQNRDRDNQSGGRNFRDRQDNRGFSDRGGFNKDRDDFRKDSRNFSNAKKETSSEIPAATVAEKGKAGGKGKGKFDKKKYEKNRRDREQQEKELRSDFRKDDKKKKKNKKQEKVVKDEIVRIEGESIGMITIGEEIVIKDLAEKLGINVSDIIKKFFMEGKLLTANAILSFEEAEEVALEYEVIVEKEVIEEISYGEKYQLEQEDTADELVTRAPVITIMGHVDHGKTSLLDALRHTNVMSDEAGGITQKIGAYQVNWKGQRITFIDTPGHEAFTEMRARGANITDISILIVAADDGVKPQTVEAISHAKEAGVPIIVAINKIDKPGADPMKVRTELTEYGLMSPEWGGTTEFVEISAKQKINLEELLETILITAELEELKANPNKRPKAVVVESRLDPKMGAVADVLVQEGTLRIGDVFVAGEAHGRVRSMLDDRGKKINKAIVSQPVEITGFNVVPNAGDILYGVESDKQAKKIVEDFIREKKVNDQNKKKHISLESLSQELEEQELKELKCIIRADSKGSVEALRESLEKLNTEKVVINVIQGSAGAVSEGDVKLAEVSNAIIIAFNVRPTTPARIIAEKTGVEIRNYNVIYHATEEIEKAMKGMLDPEYKEVYYGRIEVKQVFKVSNVGNVAGASVVDGKVTKDSKIRVIRDGIIIFNGELGSLKRFKDDVKEVVTGQECGIGIQDFNDIKAGDIIESYIMEEIPR
>NZ_AP019845.1|WP_146998575.1|1303336_1303705_+|30S-ribosome-binding-factor-RbfA
MNDRRKRGLEKEISRIIGMTLLTDIKNDKIKNLVSIHKVELTKDGRYLDLTFSVLDLKDNINKEKIAEDLNKLKGFFRKKIGSQLSIRFVPEVRIHLDDSVEYGVKIASILNEIKKENDNIG
>NZ_AP019845.1|WP_146998576.1|1303798_1305496_+|single-stranded-DNA-specific-exonuclease-RecJ
MKWELKSYNEDYLTSKSSEFGESRLISRLLLNREINTKEKVSKFLNSDKGDIHNPFLFENMEKVVERIKKAGRNKEKIVIYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGIGINKNLLNFLKKRDAKLFITVDISINNREEILMLKNSGIDIIITDHHRQIGVLEDKEQEKELGILTINPKTSETYPNKSLSGSGVAFKLADAVYERYGVNKKILYDYMDIIMIGTVADVVPMTDENRFIIKKGLNNLKKTKIKGLKYIINYLKINPRNITTSDIGFFIAPIFNALGRIDNSKIVVNFFIQEDDFKLFSIIEEMKRANKIRRYLENEIYNELEEKIQRLERPKYIFMKSRKWHSGVIGVVCSRISIKYNIPVILISIKNGYGKASCRSIEGINIFDILKSVSDKLERFGGHDLAAGFLVSEKYLGEIEKHLRQRLAKKNRENVQKTLHVDAWLNIEHLNKRKLHEINRLSPFGLDNQEPNFMDSDINFLNLTRFGINNRHFKGFVRKNNRIISVIGYNLGHKLKTNNFYKKKFKMVYTPIFKSVHSDLFIELKIKDFK
>NZ_AP019845.1|WP_146996574.1|1305553_1306840_+|trigger-factor
MAVKKLNESTYEVSAVREGEELKHLKEHVLVHFKDAKVDGFRPGHVPAKVIEKKFKKDIEGEILNHIISDEYRKAVAENELKPIADIKLEKYELNDDKVEVVFTIPVLPSFELGQYKGVEVEKEKVEITDEKVNEEIEKLRENAAKLKEVAENEEAKNDDVVNINFEGFIDGKAFDGGKAEGYDLTLGSHSFIDTFEDQIAGHKKGDEFDVNVTFPAEYHAESLKGKPALFKVKVNSIKRKEEAELNDDLAKELGFDSVEDMTAKTRENITKREEARAENEFKNKVVDAVVSATEVEVPEALVQREIDYQINRFAQQLQMQGINLNQYFQMTGQTMEAMRESSKENAEKAVKTELVLAEIAKAESIKATDEEVSKEIETLAAMYGLEKDALIADVRKNGNYERFIDETNYRLVNQKTIDLLVNEAKVK
>NZ_AP019845.1|WP_146998577.1|1307150_1307726_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MSVYSPVVIENDGRGERSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPNSRIMIHQPLGGARGQVTDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL
>NZ_AP019845.1|WP_146998578.1|1308116_1309346_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MANKKKNYCSFCGREEHEVERLIQSPEEDDVFICNECIEDSAELLDSFREYDENEHNREITLLKPKEIKAKLDEYIIGQEQPKKVLSVAVYNHFKRIMHKQKNVDNDVELQKSNVLLVGPTGSGKTLLAQTLAKTLNVPLAIADATTLTEAGYVGDDVENVLLKLIKAADYDIEAAEHGIIYIDEIDKIARKSENMSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIEINTKDILFIVGGAFEGLEAKVKDRVNEKRVGFGLETNNTKLNDLTLFENVLPEDLIKFGLIPELIGRLPVITALHGLDEEAMIKILTEPKNSLVKQYKKYFEMENVDLEFEKDAIVEIAQLALKRKIGARGLRSIIESVMTDLMYEIPSKENVKKVIITKEAVTDKEKVIIE
>NZ_AP019845.1|WP_146998579.1|1309413_1311780_+|endopeptidase-La
MQNKPFIATRELVVFPGVVTPIFIGRQSSLKSLEEAISRFDSKLILSAQKDANVEEPKFPEDIYETGVLVHVIQTVKMPNGNVKVLVEAKHRVLINQFPKDDNSVVYAEYEEIFSKPIDESKAEALKRRVIDEFSNYAQKTNKVLPDIIYNIKEISNIDKVFDLICTNLMIAVETKQELLEILDVEARAYKILSILEREIEIFMLEREIENRVKEQMAEVQKNYYLREKIKVMREEMGEGTDSDEELEELDQRVRDAKIPQELKDKLVKELSRMKKMPDFSAESSVIRTYLETVLELPWEVSTNDEIDIEKAEKILNEDHYGLEEVKERILEFLAIKKLNKTLKGSIICLVGPPGVGKTSLAHSVARSMNRKFTRISLGGVRDEAEIRGHRRTYVGAMPGRIINSLKQVGVNNPVMLFDEIDKMASDFRGDPASAMLEVLDPAQNNSFEDHYIDHTFDLSNVFFICTANDLGGIPGPLRDRMEIISIESYTEFEKLNIAKKYLIPQTQEENGLKDYKISFSDKAVMKIINEYTREAGVRNLRREISKLFRKIAKEILVSKSESKKISVSEAKIKKYLGNAKFRVDKVKEKEGKIGVVNGLAWTAVGGTTLEVQAVKMEGKGVLQLTGKLGDVMQESARVAYSYVRHIKNELGIKEKFNETTDVHLHFPEGAVPKDGPSAGITITTAIISVLTDKEVRQDVAMTGEITITGEVLAVGGIKEKVIGAHRVGIRDVVLPYDNKVDTEELPKEIADQMKFYFAKTYDDVKKIVFVEKEAKKSKAVKKVAEKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_6

1533795-1534577

Unclear

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CRISPRCasFinder
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CRT
GTAAAAGTAGTATATCCATTAAAACAAGGATTGAAAC	PILER-CR

10 spacers

csx1,csx20,cas1,cas2,cas4

The CRISPR arrays of NZ_AP019845_6

>merge|NZ_AP019845|6|1533795-1534577|CRISPRCasFinder,CRT,PILER-CR
TTTTTTATATTTATTTTACTGGATATACTACTTTTACATACTAGATAATCTATTTAAATAAATTACACGATTATCGTTTCAATCCTTATTTTACTGGATATACTACTTTTACCATCATGAAGTTATGAATGATATAAAAGTTAATCTAATGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACCATTCAATTTCTTTCCGTAAGTACTCATTTTTATTTCCGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACATTTTAAGTCCTCTCTCATACCCAACAGAACTTCCAAAGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACTATCTAACTTAGTAACTTCTATAAAAATAGTCTTTTTATGGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACATGATACGTCCATATATATTAATGGGAGATGATAGAGGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACCCATTTTTATACTTTTGTTACGGTAAGAGTCGTCATGGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACTTTATTAGCATCAGTTTCCATAGAACTTATAGGAGATCGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACCCTTACGAGAATGGTTATAAGAAATTATTTAGTAAGTTTCAATCCTTGTTTTAATGGATATACTACTTTTACTATGATGAAAGATACTATATCTCTTCCTATAATTCCTGTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC

>NZ_AP019845|6|5|1533795-1534577|CRISPRCasFinder
TTTTTTATATTTATTTTACTGGATATACTACTTTTAC	ATACTAGATAATCTATTTAAATAAATTACACGATTATC
GTTTCAATCCTTATTTTACTGGATATACTACTTTTAC	CATCATGAAGTTATGAATGATATAAAAGTTAATCTAAT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CATTCAATTTCTTTCCGTAAGTACTCATTTTTATTTCC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATTTTAAGTCCTCTCTCATACCCAACAGAACTTCCAAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATCTAACTTAGTAACTTCTATAAAAATAGTCTTTTTATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATGATACGTCCATATATATTAATGGGAGATGATAGAG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCATTTTTATACTTTTGTTACGGTAAGAGTCGTCATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TTTATTAGCATCAGTTTCCATAGAACTTATAGGAGATC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCTTACGAGAATGGTTATAAGAAATTATTTAGTAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATGATGAAAGATACTATATCTCTTCCTATAATTCCT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC

>NZ_AP019845|6|4|1533795-1534577|CRT
TTTTTTATATTTATTTTACTGGATATACTACTTTTAC	ATACTAGATAATCTATTTAAATAAATTACACGATTATC
GTTTCAATCCTTATTTTACTGGATATACTACTTTTAC	CATCATGAAGTTATGAATGATATAAAAGTTAATCTAAT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CATTCAATTTCTTTCCGTAAGTACTCATTTTTATTTCC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATTTTAAGTCCTCTCTCATACCCAACAGAACTTCCAAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATCTAACTTAGTAACTTCTATAAAAATAGTCTTTTTATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATGATACGTCCATATATATTAATGGGAGATGATAGAG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCATTTTTATACTTTTGTTACGGTAAGAGTCGTCATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TTTATTAGCATCAGTTTCCATAGAACTTATAGGAGATC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCTTACGAGAATGGTTATAAGAAATTATTTAGTAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATGATGAAAGATACTATATCTCTTCCTATAATTCCT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC

>NZ_AP019845|6|5|1533870-1534577|PILER-CR
GTTTCAATCCTTATTTTACTGGATATACTACTTTTAC	CATCATGAAGTTATGAATGATATAAAAGTTAATCTAAT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CATTCAATTTCTTTCCGTAAGTACTCATTTTTATTTCC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATTTTAAGTCCTCTCTCATACCCAACAGAACTTCCAAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATCTAACTTAGTAACTTCTATAAAAATAGTCTTTTTATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	ATGATACGTCCATATATATTAATGGGAGATGATAGAG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCATTTTTATACTTTTGTTACGGTAAGAGTCGTCATG
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TTTATTAGCATCAGTTTCCATAGAACTTATAGGAGATC
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	CCTTACGAGAATGGTTATAAGAAATTATTTAGTAA
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC	TATGATGAAAGATACTATATCTCTTCCTATAATTCCT
GTTTCAATCCTTGTTTTAATGGATATACTACTTTTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_146998723.1\|1535970_1536267_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|379750
NZ_AP019845.1\|WP_146998717.1\|1527941_1528325_-\|hypothetical-protein	csx20	xls002255_csx20_CAS-I:CAS-III	unknown
NZ_AP019845.1\|WP_172618346.1\|1530437_1531787_-\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|274040
NZ_AP019845.1\|WP_146998725.1\|1539916_1540483_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998718.1\|1528345_1530247_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998714.1\|1525325_1525616_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_AP019845.1\|WP_146998724.1\|1537895_1539878_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379523
NZ_AP019845.1\|WP_026749270.1\|1548086_1548626_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998716.1\|1526768_1527386_-\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_AP019845.1\|WP_146998726.1\|1540633_1542733_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236069
NZ_AP019845.1\|WP_146998721.1\|1532861_1533554_-\|50S-ribosome-binding-GTPase	unknown	unknown	gnl\|CDD\|226124
NZ_AP019845.1\|WP_146996967.1\|1531965_1532187_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146998715.1\|1525664_1526645_-\|CRISPR-associated-endonuclease-Cas1	cas1	pfam01867_cas1_CAS-I:CAS-II:CAS-III	gnl\|CDD\|376633
NZ_AP019845.1\|WP_146998713.1\|1524687_1525311_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_AP019845.1\|WP_146998720.1\|1532356_1532614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223014
NZ_AP019845.1\|WP_026749268.1\|1543918_1544158_-\|thiol-reductase-thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_AP019845.1\|WP_146998722.1\|1534884_1535892_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_AP019845.1\|WP_026749263.1\|1536256_1536547_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_AP019845.1\|WP_146999404.1\|1544524_1548034_+\|methionine-synthase	unknown	unknown	gnl\|CDD\|273959
NZ_AP019845.1\|WP_146998727.1\|1543370_1543742_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|179603

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_146998723.1\|1535970_1536267_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	2.9901e-33
NZ_AP019845.1\|WP_146998713.1\|1524687_1525311_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	9.06219e-18
NZ_AP019845.1\|WP_026749263.1\|1536256_1536547_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	3.06592e-19
NZ_AP019845.1\|WP_146998714.1\|1525325_1525616_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.61964e-18
NZ_AP019845.1\|WP_146998724.1\|1537895_1539878_-\|hypothetical-protein	gnl\|CDD\|379523	pfam14253, AbiH, Bacteriophage abortive infection AbiH. This family of proteins confers resistance to bacteriophage.	0.000183911
NZ_AP019845.1\|WP_146998716.1\|1526768_1527386_-\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	2.09034e-08
NZ_AP019845.1\|WP_146998726.1\|1540633_1542733_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_AP019845.1\|WP_146998721.1\|1532861_1533554_-\|50S-ribosome-binding-GTPase	gnl\|CDD\|226124	COG3596, COG3596, Predicted GTPase [General function prediction only].	1.68226e-46
NZ_AP019845.1\|WP_146998727.1\|1543370_1543742_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	5.14135e-35
NZ_AP019845.1\|WP_146998715.1\|1525664_1526645_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	4.76087e-86
NZ_AP019845.1\|WP_146998720.1\|1532356_1532614_-\|hypothetical-protein	gnl\|CDD\|223014	PHA03231, PHA03231, glycoprotein BALF4; Provisional.	1.40588e-07
NZ_AP019845.1\|WP_026749268.1\|1543918_1544158_-\|thiol-reductase-thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	5.87994e-14
NZ_AP019845.1\|WP_146998722.1\|1534884_1535892_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_AP019845.1\|WP_172618346.1\|1530437_1531787_-\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|274040	TIGR02221, CRISPR-associated_protein_Csx1_2, CRISPR-associated protein, TM1812 family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1812 of Thermotoga maritima, is found also in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, a large plasmid of Synechocystis sp. PCC 6803, and Fibrobacter succinogenes S85.	2.03748e-30
NZ_AP019845.1\|WP_146999404.1\|1544524_1548034_+\|methionine-synthase	gnl\|CDD\|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0

>NZ_AP019845.1|WP_146998721.1|1532861_1533554_-|50S-ribosome-binding-GTPase
MTSFKYYRKTDIEKKLEKARFMPLDVMITGVTGAGKSTTLNTIFKKNVATVGNGVDPETIDLEFYSLNDVFRLWDTPGLGDGIKNDEIHKRRLVNLLYKTYSLDGNVYGWVDLAIVVLEGLNRDMGSTYALLNEVIVPNIQADRILVVINQADMAMKGRHWNKETNKPDETLVEFLEKQASSIQDRVKEATGITIRKPVYYSAEYGYNIEKLLDFIIDNMILERRPLIKA
>NZ_AP019845.1|WP_146998720.1|1532356_1532614_-|hypothetical-protein
MKNMNKEEVMWTDNDDLKDYRKGILEKFVESVAKGAMLGGAIGEILGSFAGLGGIGRIVGSVVGVGLGIAGSLVSGVVDFLGGIF
>NZ_AP019845.1|WP_146996967.1|1531965_1532187_-|hypothetical-protein
MTGIEKVVGTAVVVTAGVVAVAEGINQTVKLMNETVNTADDMFTTMGNMAEDFGNSVNDFCNEVSSFFDSLSW
>NZ_AP019845.1|WP_172618346.1|1530437_1531787_-|TIGR02221-family-CRISPR-associated-protein
MAKILIAGLGKGIKKDGKYRETNYSIEKIDKENIIYKNESFITSALEKHFEIDKTIYIGTVGSMWDNLYSYYCNKYNLKEDEDYTFELLEASSNATQDSEFSEINIKKFNDIFEGKARIILTKFGMNTNEIFENFNLIMEIGNMLNDGDEIYLDITHSFRSNAMWMFLVINYITNVLDKNVEVKMISYGMFEAKYKKEVIENGETKEIEISPVVNLKAFFDLMKWIKGANELKNYGNSYTILEMIDDKDVNKKIRTFSDSLNLNYLGTIKRNLESIKRIMDKIDSIEGPGKLIIPNIVKDFIEIFGNIEKEYEFLFKIAEWNFNQKRYAMVAININEGLREFVAGILEIEDRVSDFNDENSGIFKYFKKIRQSIEYKPNNTKGTFDKKEEKIYKIFEHTRKIRNEIAHSKGEKDTAINDVESLKNYVKDIDTIISDKGFIKYLKLKYNV
>NZ_AP019845.1|WP_146998718.1|1528345_1530247_-|hypothetical-protein
MGNTVTRNELRERVRKILVGTLLNEEEKVSDNLLDTVIKYYFPKQEKNIINGEEKWIPKKQKVIPEEEKFLERGYEDLIKKEREKISGEIDINKVKVIVSAFSLSPKNSLLEEYPFEKDLRIFDNIEKIYLFYTKETEYKFESYKNNCKFNEKIEGVEIDGRTVDETYKKLRELVLKNKINKDNTILDMTLGMKTISIAFYRIAVERQLKAVNWNEKFLSSYTMINENEFVENKNGGTPRIALSAKLSLMKEPIKESARIYSRINDSIRRGNFEAVGNLYEINGNNDMAFFYKELDTIFNADKIIKYNNFEYFYEDVEKLLDIILAKSREFNNMEISKVKKGVAYLANLVWIFSSRKKGKDSKFKLSESDFVENNFSDFRRGEENGIDLEDREEWDDSLEEIMIYLKFKYVILTNKPYFYFEKIVNDMKKSQIDDNIQEKIRKYIEESEKEGKKISLEKIYKLMFSKKYNFYEEIKKYDMESTLLEILENSLSYKNGILIIPIKSEYNLEAFTLKINFNEEKGLKNILKLRNFEVPIKYEPVHELLREIEIKGYDSTVTNDKIEKIFKKVENPNQSITKFKDVIKNINEVIKEKLKKEAKNENKKIEIKIPDFIEMSNAKKDYSVRISDKWKI
>NZ_AP019845.1|WP_146998717.1|1527941_1528325_-|hypothetical-protein
MEKKVLLVFSHQLTENQEKELIEGYGVKQIESLPEELQNMWSNVSIKKDYKENQEKIKKFVKENFGKKDIILIQGNWGYTYNLVKWSIENGLIPVYSYTERNVEEIKDGENVKKISYFKHVKFIEYE
>NZ_AP019845.1|WP_146998716.1|1526768_1527386_-|EcsC-family-protein
MLEREMMNLLDSCYDKALEGVLPGERTVMELAEDYLGQSCSREKAIDNLIGYQTVLCGTNGFIAGLGGLLVLPVAIPANITSVIYVQLRMIAAIAYINGYDIYSDQVRTIAYACLTGSSATNILKNVGIKIGEKMAVNAVKKIPVAVLVKINQQVGFRLVTKFGQKGLVNIGKIMPFVGGLIGGAFDTGMTLTIGNITKKVFSEK
>NZ_AP019845.1|WP_146998715.1|1525664_1526645_-|CRISPR-associated-endonuclease-Cas1
MELYITDLGTMVKKRDDLFEITTSEKKVAVAPQKIKSLVLAKGIFLTTDVIRLAVENNIDIVIVDDFGNPYGRFWQSKFGSTANIRRKQLEIFGTQKGIEIAKQILIQKIKNCAEHLEDLKIKREAKKQFLDEKIKEMKKYIYQIKLVEGDVSAKRGTLMGYEGNAAKIYYQTLSELMPKEFKFEKRSMHPAEDEFNAMLNYAFGILYSKVEKACIIAGLDPYIGIIHTDNYGKKSLVFDIIEGYRHLASRTVFSLFTQKRVQKYFFKREGDGVTLIGDGKKVLVESFYNRLEKKVRYNNRNISNLDKLQFECHELANRLISKQNC
>NZ_AP019845.1|WP_146998714.1|1525325_1525616_-|CRISPR-associated-endonuclease-Cas2
MMTWFIYDITDDRNRSRLIKIAQKHGLYRVQKSVFLGNIEKDEIDQIIKESRKVIDLREDSVYIFPVCDADYKKATLLGLAFEKDIVQDEKPVLFF
>NZ_AP019845.1|WP_146998713.1|1524687_1525311_-|CRISPR-associated-protein-Cas4
MDISKNQGISIFQVIDYVYCPRIIYYEEVLKVFGNKMDDFKRKEEKRMEGKGSINRKWIWERLKLRKKDINNLSQWENKEFNKELYSKKYHFYGKIDEILYLRDETIVPLYYYNSKYTAREDKKYKYLMAMFSMLIEENYKIESQRGYILFLDGLSLKKIEYTTKDFEIIKRQIAQILELIKTERYPLEVEGGTKCRDCYYKKICGR
>NZ_AP019845.1|WP_146998722.1|1534884_1535892_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MEKKIYEAVNWNTPENDYVEMFWEQNLKQFWIDTEYIPSKDIDSWNSLEPAMKLAYLHVLGGLTLLDTLQSHTGMPKIIDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQENPHLQYKANKIDTYYQKMNNPEASKREIAMALAASVYLETYLFYSGFFLPLWLAGQGEMVASCDIIKKIIADESIHGVFVGLLFQELYNSFSEEEKVDMRAELKKLMYDLYENEARYTDEIYGDIGLTGDVKEYIRYNANKALMNLGFEEEFEVKNVNPIVLNGLNVETTQHDFFSKKSTNYEKALEVVHLHDDDFKFDEEVNADELI
>NZ_AP019845.1|WP_146998723.1|1535970_1536267_-|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MKGKKEEYKYSVILTGKFKKHLKNLKKQKKDLKLLESIISILAKGEKLPPKNKDHKLVNNYDGARECHITPDWLLIYEIVEDKLILILLASGSHGELF
>NZ_AP019845.1|WP_026749263.1|1536256_1536547_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MATVNTSIKIDEETKKEAQKLFKDLGLSLSTAINIFLKQAIREKGIPFYINSLPENSELAQAFEEVKQIKKNPSNYKSYSSPEEMFKDVLGEDYEG
>NZ_AP019845.1|WP_146998724.1|1537895_1539878_-|hypothetical-protein
MSINKEDKVLYIIGNGFDLNLGLKTSYNNFFEYTGILTMRKVVEELKKNRNIENYDEVKLSEFIENLKKHILIDENDVYLLELKKNIKMQDTEKIRDSMYSFQRKIFITLKSEKTDNFIDDYGLFIIFLILMETEKDNEWQWVEEKILSYIEELIELLSNNFEETAMYIKNNLIEVEKKIENFINTIVKEKDVKKAKKIFLKNGDKKIYENLLKLFEKKIEKYFKNSQEKSEELKKDIKNIIYKIEYINFILQILFTDFEKKIVFELLNLKIVNINNGEKIDLKEQLHVFENEFGNYVKKINEIAKKIIETDFKYKEIENINDFIEIQKFSLKKMEKIFSNTKESKYVINFNYTDYLDKIAKKVNIIEIKYIHGDVKYTNNTILVNKDNNRSLRFQKTRDKMIVNNIRETLKYLRKFNNIINITKKIQKEIEMTLFLNVFRDKSKILKKLNLEIEINCNNLKKYIKKLYELGQYGLMMEVENSYILKMLNEEIKEKIKQILDYNNTRNITKFNMESILLECKESFEKNIESCTKKINDESVKKNSNIIFGIDKTQIKNFKNELKDFIKSNRRKNMELEWKQLLNEHKFTKIYFYGHSLADADYTFFEDLFNMIDITTNSTTKLIFLYSKGYSYEKNVKKLIGTYYFEKFKSEGKLELIEI
>NZ_AP019845.1|WP_146998725.1|1539916_1540483_-|hypothetical-protein
MSKLKVEIGTFEFQYNEILTDVIFDTRSSESWEIIFMKVGIGKTLTIPIKLGYKFTIDTSKKYKEFISFFNIKNGKGKFSIKSFKGYFNENIPDEYKLSDNAREKIIKYNRIDTGSEGIYPISLKNWELIHAKNNKLPKDKFHRRPENLAKTKQLYPDLYEAIKDKDISVKYSTEIGGQTEQIKKLNF
>NZ_AP019845.1|WP_146998726.1|1540633_1542733_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MVDKRAKKWIYLNNEIMVKKGEDFQLEKDKEAVYSYFVDYVNKNTVFFHNLEEKMRYLIKNDYYIDFYEMYSHDEIKEVFKLVYDKKFRFASFMSASKFYQSYALMDDTGEKFLERYEDRIATVSLYLAQGNAEKAKEYALMLINQEYQPATPTFLNSGKKRSGELVSCFLDEMGDNLSGIGYIFDSSMKLSSIGGGVSINLSKIRARGEAIKGVEGRASGVLPIMKILEDIFSYANQLGQRAGAGAVYLNVFHSDINEFLDSKKINVDEKIRIKSLSIGVIVPDKFMQLAMEDEVCYTFNPHTVFLEYGQYLDEMDMNEMYEKLVDNPNVKKKKINARELLVKISQTQKESGYPYLFFKDNANKEHALKEIGTVKFSNLCTEIMQLSEVSDINAYYEEDTIRRGISCNLGSLNIATVMENKRIKEATKAAIDSLTMVSDLTNIDIVPSIKKANDELHSVGLGAMNLHGYLAKNFIMYESKEALDFCNVFFMMVNFYSLERSMEIAKEKGETFKDFEKSEYANGNYFDKYITKEYMPQTEKIKQLFEGIHIPTKEDWANLKEQVMKYGVYNAYRMAIAPNQSTSYIMNSTASVMPVVDTIEVREYGDSTTFYPMPYLTNDNYFFYKSAYDMDQKNILKLISVIQRHVDQGISTILYTKSTDSTRDLARLYIYAHRLGLKSLYYTRTRKATIEECISCSV
>NZ_AP019845.1|WP_146998727.1|1543370_1543742_-|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MYIYYDSKTGNVERFIKRMQVQRPDWHFIKIEPTMTIENEGHFLTFTTKIGEIPATTDEFLKNENNSKLLKSVSSSGNRNWGQFFALAADKIQEKYEIPVLMKFELSGTSTEVENYIDYLENN
>NZ_AP019845.1|WP_026749268.1|1543918_1544158_-|thiol-reductase-thioredoxin
MKKIIKFEKNDCNPCAMVSDLLDKKGVEYERINPFDNPEIAVKYKVRSVPTVILFEENEEIKRTIGFKPEEINEIISMM
>NZ_AP019845.1|WP_146999404.1|1544524_1548034_+|methionine-synthase
MLTNQYKNSYNLLQNDLKNRILLLDGAMGTMIQQENLTADDFGGEKYEGCNDYLVLQKPEIIKNIHKRYLEAGSDIIETNSFGALDIVLKDYDLEDKVFEMNKAAAELANEAIAEYKNEHPEVTRNLYVAGALGPSNKSISVTGGVTFEELIHTYYTAVSGLMAGGVDLILFETIQDTRNLKAAYLGLKKAMEENYTVPLMLSFTIESTGTTLAGQTADAFYYAVNHMNPFSVGLNCATGPEFMTQFLKTLNNISNTYISVYPNAGLPNEDGEYEETPDTLSAKVEPFFQNNYLNIVGGCCGTTPEHIQKIKEKSVNYSPRVIDKNKNFNDVSGLIALETPKDRPIYVGERTNVIGSRIFKNLIASEKFDEATEVARLQIKGRADVIDICLANPDRDEIADMKAFLDKVAKFAKVPLMIDSTDINVVKEGLTYLQGKGIINSINLEDGEKKFTDMAKVIKDFGASVVVGLIDEEGMAVSVERKLEIARRSYELLTKKYRIDERDIIFDTLVFPVATGDQKYIGSATATIEAIRQIKAEMPNVKTILGVSNISFGLPIAGREVLNTYYMQKAYEAGLDYAIVNTEKVIPMSEISDEEKKLSENILFHTDDENVSKFANFYREKKAVQKVVDTSNLTTEEKVSNLVVEGSKKDLTMHLDELLKKYSPIDIINGPLMTGMDEVGRLFNNNDLIVAEVLQSAEVMKASVSHLEQFMEKDESSVKGKVIMATVKGDVHDIGKNLVGIIIGNNGYEVIDLGINTPAEKIREAIIEHKADFLGLSGLLVKSATEMVNTMEVLHEAGIDIPIFVGGAALTEKFTVNKIEPAYKNNIVIYSRDAMTALADLNKMINEKKFEEFKEYLQKRRDLVTIKDAKKLEQLKVKPTVSDIKDADGTFDFSKVELPKYNFEKIYKPETLNKQIITNIKAKDVFPFVNLQMLIGKHLGMKWIVNNLIEKQDPRTIKLYNEILDIIENGDEYFDIKAIYKFFPVRRKVGERKDDFKIEVLSDDLSTVLETFDFPRQKYGQYLSLNDYVNPDRIDYIGFFVATAGEKSRLVSNELKEKGEFYRGHIVNSVGLELAEATSEYIHKMMRQDVGIIDKDITLNEILNAQYQGNRYSFGYPACPDLSDQRKLFNLLKPERYGISLTEEFMMYPEATVSAIVFSQPFCKYFNM
>NZ_AP019845.1|WP_026749270.1|1548086_1548626_+|hypothetical-protein
MYQIIKMILLSSVFIDYIDIQKLDKSGFTTHIIEIMLVLSLINSIVNLYDEKKFLIIEFLIIILFHLAGNKIILENFSFFWQSIKLIGVYILHLLITTDVGMDDNNINPFSKVEWTIVLVTVLIFLLLMLIFKIEINSLSILSLYCITLFELKGIFRNLTEYIETQKKIEKENKDKWQK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_7

2425483-2425587

Orphan

Consensus_repeat	Method
TGGTTCTCTTTTCACATATACAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019845_7

>merge|NZ_AP019845|7|2425483-2425587|CRISPRCasFinder
TGGTTCTCTTTTCACATATACAACTTTTTTTCTTCTTGGAACTCTTATAAAGATGTATCTTCTTCTTATTACTCTTCTTTTTGGTTCTCTTTTTACATATACAAC

>NZ_AP019845|7|6|2425483-2425587|CRISPRCasFinder
TGGTTCTCTTTTCACATATACAAC	TTTTTTTCTTCTTGGAACTCTTATAAAGATGTATCTTCTTCTTATTACTCTTCTTTT
TGGTTCTCTTTTTACATATACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_146999232.1\|2423716_2424394_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_AP019845.1\|WP_146999225.1\|2416846_2417707_-\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|226231
NZ_AP019845.1\|WP_146999224.1\|2415493_2416447_+\|ATPase	unknown	unknown	gnl\|CDD\|379051
NZ_AP019845.1\|WP_146999233.1\|2424374_2425034_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_AP019845.1\|WP_146999226.1\|2417786_2418605_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_AP019845.1\|WP_146999235.1\|2425985_2427776_+\|NAD-nucleotidase	unknown	unknown	gnl\|CDD\|211667
NZ_AP019845.1\|WP_026749444.1\|2436213_2436861_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|236773
NZ_AP019845.1\|WP_146999229.1\|2421689_2421908_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_036095824.1\|2428227_2428596_+\|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|212143
NZ_AP019845.1\|WP_026749442.1\|2434235_2435126_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_AP019845.1\|WP_146997579.1\|2431531_2432842_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_AP019845.1\|WP_026749441.1\|2433493_2433907_+\|adhesion-protein-FadA	unknown	unknown	gnl\|CDD\|370466
NZ_AP019845.1\|WP_146999236.1\|2428713_2430369_+\|5'-nucleotidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|223808
NZ_AP019845.1\|WP_172618393.1\|2422897_2423659_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_AP019845.1\|WP_051354473.1\|2430579_2431305_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146999228.1\|2420829_2421612_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146999227.1\|2419299_2420829_+\|dynamin-family-protein	unknown	unknown	gnl\|CDD\|366045
NZ_AP019845.1\|WP_146999237.1\|2435225_2436014_+\|META-domain-containing-protein	unknown	unknown	gnl\|CDD\|377111
NZ_AP019845.1\|WP_146999230.1\|2421991_2422840_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270412
NZ_AP019845.1\|WP_026749440.1\|2433005_2433413_+\|adhesion-protein-FadA	unknown	unknown	gnl\|CDD\|370466

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_146999232.1\|2423716_2424394_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.18032e-59
NZ_AP019845.1\|WP_146999225.1\|2416846_2417707_-\|GyrI-like-domain-containing-protein	gnl\|CDD\|226231	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown].	3.05325e-31
NZ_AP019845.1\|WP_146999224.1\|2415493_2416447_+\|ATPase	gnl\|CDD\|379051	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalyzed reaction. The delta subunit is also known as HolA.	1.18695e-38
NZ_AP019845.1\|WP_146999236.1\|2428713_2430369_+\|5'-nucleotidase-C-terminal-domain-containing-protein	gnl\|CDD\|223808	COG0737, UshA, 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism].	9.37084e-89
NZ_AP019845.1\|WP_146999226.1\|2417786_2418605_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	8.35105e-68
NZ_AP019845.1\|WP_146999235.1\|2425985_2427776_+\|NAD-nucleotidase	gnl\|CDD\|211667	TIGR01530, Probable_5'-nucleotidase, NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides].	0
NZ_AP019845.1\|WP_026749444.1\|2436213_2436861_+\|C40-family-peptidase	gnl\|CDD\|236773	PRK10838, spr, bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase.	5.84076e-34
NZ_AP019845.1\|WP_036095824.1\|2428227_2428596_+\|nucleotide-pyrophosphohydrolase	gnl\|CDD\|212143	cd11536, NTP-PPase_iMazG, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in integron-associated MazG (iMazG) proteins. This family corresponds to the iMazG proteins representing a new subfamily of MazG NTP-PPases. iMazG is likely to act as a house-cleaning enzyme capable of removing aberrant dNTPs, preventing the incorporation of damaging non-canonical nucleotides into host-cell DNA. It can convert dNTP to dNMP and pyrophosphate by cleaving between the alpha- and beta-phosphates of its dNTP substrates, with a marked preference for dCTP and dATP. Unlike typical tandem-domain MazG proteins, iMazG contains a single MazG-like domain and functions as a tetramer (a dimer of dimers) with a typical four-helical bundle. The divalent ions, such as Mg2+, are required for its pyrophosphatase activity.	1.55233e-30
NZ_AP019845.1\|WP_146997579.1\|2431531_2432842_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_AP019845.1\|WP_026749441.1\|2433493_2433907_+\|adhesion-protein-FadA	gnl\|CDD\|370466	pfam09403, FadA, Adhesion protein FadA. FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices.	1.3321e-24
NZ_AP019845.1\|WP_172618393.1\|2422897_2423659_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	9.27694e-136
NZ_AP019845.1\|WP_026749442.1\|2434235_2435126_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.138e-19
NZ_AP019845.1\|WP_146999233.1\|2424374_2425034_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.90588e-58
NZ_AP019845.1\|WP_146999227.1\|2419299_2420829_+\|dynamin-family-protein	gnl\|CDD\|366045	pfam00350, Dynamin_N, Dynamin family.	1.50763e-13
NZ_AP019845.1\|WP_146999237.1\|2435225_2436014_+\|META-domain-containing-protein	gnl\|CDD\|377111	pfam03724, META, META domain. Small domain family found in proteins of of unknown function. Some are secreted and implicated in motility in bacteria. Also occurs in Leishmania spp. as an essential gene. Over-expression in L.amazonensis increases virulence. A pair of cysteine residues show correlated conservation, suggesting that they form a disulphide bond.	1.23749e-22
NZ_AP019845.1\|WP_146999230.1\|2421991_2422840_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270412	cd13694, PBP2_Cysteine, Substrate binding domain of ABC cysteine transporter; the type 2 periplasmic binding protein fold. This subfamily comprises of the periplasmic-binding protein component of ABC transporter specific for cysteine and its closely related proteins. The cysteine-binding domains belong to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.68132e-123
NZ_AP019845.1\|WP_026749440.1\|2433005_2433413_+\|adhesion-protein-FadA	gnl\|CDD\|370466	pfam09403, FadA, Adhesion protein FadA. FadA (Fusobacterium adhesin A) is an adhesin which forms two alpha helices.	5.22541e-21

>NZ_AP019845.1|WP_146999233.1|2424374_2425034_-|ABC-transporter-permease-subunit
MDFNFIIENIPKYLEAMKLTVLIGIFGIVFSILIGIVCALVLYYRVPVARQIVEIYIELSRNTPLVIQLFFLYFGLPKIGITFNSHACAVIGLSFLGGSYMCEAFRSGLESITKGQRESGLSIGLTEFQLVTNVILPQAFTVSFPAIGANIIFLLKETSVIGILALMELMYLTRDLIGLYYKTNESLFMLVVAYLIIILPVSIILAVIERRMRYATVGN
>NZ_AP019845.1|WP_146999232.1|2423716_2424394_-|ABC-transporter-permease-subunit
MQLSGIDVIFKGVNLQRLMGGLAVTGQVALVSIVFSILFGIILGIVMTSKNKIIYGILKFYLESMRIIPLLVWLFIIYFGVAKGFGLHIDSETTTIIVFVIWGTAEMMDIVRGAIISLPKIQGESAKALGLDTSQVYRYVLLPQAVRRIAPAAVNLITRMIKTTSLAIFIEVAEVLKIGRQIIEFSSRKNPMAPFWVYLFIFFLYFIVCYPITMLSKKMEKKWVV
>NZ_AP019845.1|WP_172618393.1|2422897_2423659_-|amino-acid-ABC-transporter-ATP-binding-protein
MELSDIKKEYKKGVPALKGVSLSVNKSEVVVILGPSGCGKSTLLRCVNGLEEIQSGEIKLQGNVINKDKTKWHLIRQRIGMVFQSYELFDHMTVMQNLLLGPLKVQKRHKKEVTEQAEKLLERVGLLDKKNSYPRELSGGQKQRIAIIRSLCMNPEIMLFDEVTAALDPEMVREVLDVMLELAKEGMTMIIVTHEMEFAKAVADRIVFMDSGEVVETNYPLEFFRNPKTERAKKFLNIFNFEKKDKVESALLI
>NZ_AP019845.1|WP_146999230.1|2421991_2422840_-|transporter-substrate-binding-domain-containing-protein
MKKNFERFVKIIAILVLGVFAISCGKGEKGSAKPGSIEAIKKAGKIRIGVFGDKPPFGFVDENGKNQGYDVYLAKRLAKDLLGDENKIEFITLEAANRVEYLLSNKVDIILANFTVTDERKQKVDFAKPYMKVSLGIVSPEGAPIKDVKELKGKKLIVNKGTTAEIYFTKNHPDIELLKYDQNTETFNALLDKRGAALAHDNTLVFAWATENPGFVVDIKELGEQDYIAPAVRKGNKELLDWLNAEIDALTKEGFFEKAYKATLEPVYGNKVDPKTVIIEKK
>NZ_AP019845.1|WP_146999229.1|2421689_2421908_+|hypothetical-protein
MRLDKIIAEQEIINQRIDMLQEIINVSNEKLMNYQTKESQNMYGILNQLLLKDVLENYDGTLQELIKKHNSK
>NZ_AP019845.1|WP_146999228.1|2420829_2421612_+|hypothetical-protein
MGFWDLIENAIEGAADFVRNTGIIDKIVEIGEGIADWFKDVFNIGDAPSYDKDTATIDETKKVNEILQTYIEKCLNISEKYDNISKGEINKYFSQIKNSLTDINKISENNTENSDKVIEDYIFDSLELNRNTTLKSLDKIYSNEIKDAYSLSNFELLDILKMEQGREKKKKMNAFSVKTLTEANEFLFDELKNSINQQQNLVDKKLRDYMYSREEETRRSIEKINEILDSVKTGEKEKQELKNSYVELLDEVKLFDEIFA
>NZ_AP019845.1|WP_146999227.1|2419299_2420829_+|dynamin-family-protein
MLNLEQYIRNNNEELINIHWNETINEYVKKLNASKVLFKNLSEKEYFKSTDTLKGNTFFKEINTEISRYISDSKNPSYQIAIVGAVKAGKSTLINALIGYDLASTNVTPETATLTKIKTTDKNSITVKFYSREEWKKIWNDAQKSTNATIFKEEFDNLRAKEIESEMLGKSDIFKEFDNLDSMKDEIKKWTSSHAREHYFVKEIEIGVEKLNLPPQVCLVDTPGLNDPVQYRSNITSEYIHSANAVIICVNAKTLRNEEIATILDVLTKAQDKKDKVYILGTQIDIMNSQADWEQQQEEWLKHLKEKQFYGSLDMAKEQLIGVSSYFYSNAIKLSSDTDIDSLEDSIDDLVKKEKMTKQDRRELLRKDNITPEDIEQIKNMLIDYSNIEIVNDNIQNKLILGFNESLKNDFLNRYNYLKNKIETFKKEHIEKIQGNINSFEQSENELKQQILQNERQKEELETLNRRLRLKIRETTQAFNTDFEELNSNFRNLMREIKKVKFEEESEDR
>NZ_AP019845.1|WP_146999226.1|2417786_2418605_-|Cof-type-HAD-IIB-family-hydrolase
MNYKLIATDMDGTLLDEEHGITSENVEAIVKVQKEKGVKFVLASGRPSYAMFEYAKELQMDKYEGYVLAFNGGELIDMKTNEVIFHEGLGKKDIENVYKVSKEINVPMILYVGDTIYGTEATDGVMYETNQCKMKFQKFDSLEDLEKKGIEKTTKCMIIGTPEEVLMAEEHMNKVHGNDYFIAISKPIFLEIANKNVDKGKTLKKLGEIENIKPEEMIAVGDSANDKPLLEYVGMPVAVENAIPEIKSISKFISTSNVEHGLKTTIEEFFEF
>NZ_AP019845.1|WP_146999225.1|2416846_2417707_-|GyrI-like-domain-containing-protein
MIKAFNETMKYIEETLTDRIDVRKIALLSGYSYPLFSRMFSIMVDYPLSEYVRFRKLSCAAIDLRESDEKIIEIAFKYGYESQDSFSLAFKKFHGYTPKEVRKGSAFQIFSPIRLSLSIEGGKNMDIKVMKKSAFKIAGLVERIEEGGDFPNVWDKLFKKVSPEKLENLGNRQSYGACYEIEKNENCESKFTVNYMAGYDIQNVTEANDLGLNILEVPEAEYAIVKLKGIVPNCIHEGWKYVTGTFFPEQGYRHAETPDFEVYSEGDMYSPDYEMELWVPIVKDKN
>NZ_AP019845.1|WP_146999224.1|2415493_2416447_+|ATPase
MKLQEITEKFKNEINQDKISASYLFYGDKRVDLLSYALMFSKMIMTKDVQNDSEKEKIERLIDNFQHPDIEIINKNNENIKIDEVREIIYSSIESSFNSPKKIFILCGIENLRKESSNALLKILEEPPQNVYFILLSRTLNIISTIKSRTIKFHLSGMNNDELGVSKETYYFFDGNENDILEFKRQNLSLDDIKFKINTVEDILQIIFEMKNYATGELAIKNNLDLMIKYNKSIELLARRIRFWDIENVYFFINEIENKLKKEKEFLISFLSKFIINVKHSVEAEDLKKLINLKNSIRSNVNVKSVIFNFFDILQSS
>NZ_AP019845.1|WP_146999235.1|2425985_2427776_+|NAD-nucleotidase
MKKLLLLGLTLALFFTVNLEAKTNRKVNKQDSSGSFELNVAHINDHHSHLEEEKMPLKLNGKTVTVHIGGLPRVAQEIKNFRQNNKNTLVLHAGDAVTGTLYYTLFEGKADAELMNAINFDVYTLGNHEFDDGNKFLKAFLDVLKIPVVSANVVPDKGSILEGKWKPYIIKNIGGQKVGIIGLDVVKKTKESSSPGDDIKFFDEIETARKYVNELQSKGINKIILLSHAGYEKNVEIGQKVDGVDLIITGDTHYLLGKEFEQFGLVPEADSYPKKVNSPNGNPVYIAEAWNYSYLLGQMKAKFDKNGVITELTPTPKVLISDDFFEIKNAEGKAVQLNQKEKNEILNSIKNNKNIAAIKNDPALAKLLERYQKEKTELGKRTVGKITEEIPGGSDNRVPNEHNKDGSFATTLVAESVLHKLRNTGTGNVDFVIGNAGNVRITLNPGVFTYDLAYSLLPFTSNTVFITDITGAEVKQTLEDAIDYVLNGGSTGAFPYGAGIRYEATKEGKLGTRVKKIEVFDFKANKWVPIDAKKSYMLAVNSYIAKGKDGYTTLGKITAQKRGTDTHLSDTKIFIDYLKEKKEIGKPKSTNVIFKY
>NZ_AP019845.1|WP_036095824.1|2428227_2428596_+|nucleotide-pyrophosphohydrolase
MTLKEVQYLIKRIEKGTLDETKDDKSPQQKRENGQRLILKLIEEFGELAENIRKNVRYDGKNIKGTIEEEVFDVFYYIIAIANDYEIDLEKIFYIKDEVNEVKYDREFSIYEARNKWKSMKK
>NZ_AP019845.1|WP_146999236.1|2428713_2430369_+|5'-nucleotidase-C-terminal-domain-containing-protein
MTAKNTNTSFKKKEVSIKILGTSDVHGRVLAWNYAADEEDKSGSYAQISTLVKKIRKKNKNVILVEVGDAIQDNWIEKFAMTPKHPIPEILNYMGYDIFVPGNHEFNFGMPTLSNILRDMKFKKLTANLYYNENAENDTNFSKDKSRYLDATTIIEKDGVKIGIIGLSTPMSAQFEEDTGYLNDFYFVSPVKETQRQIKKLKEEGANAIVVVAHMGIENENGIPETGVKDLANAVPEIDVIVAGHMHQNIQKEIINGVLITEPHRYGTVISEVDLKFEVIGENIKLISKDSTTIPVKNEKPDKKIEEIYKPFHRRLCTIANEEIGETLNDMIPKEKHHGVSAAFGKDTGMSSFITDVELYYSGADVVSFAYNYENVKLDKGKIRRKDIVYNYRYTGGDVTIYEMTGKQLKDYMEWAADYFDTIQAGDTEYRYNPERANGKYVTFDIFGGVKYKIDLRNEKGNKITNLMLVNGIKITPNMKLKVGMNAYRFEQLARKGGIFDGQEIPVLWASKEAIGNIKGTIQNMMIDYIRNVKNGVIEGKSHNNWEIIGL
>NZ_AP019845.1|WP_051354473.1|2430579_2431305_+|hypothetical-protein
MSFGNDETVIGEKLNKLLAILKKDERNYIVSEDIITIYESKIGKDYEKYLDLFTKYTPYDYEKLFAKMVYYRGTGKKDKSDNYYKEIERKYSNTPIMEIIKIYNTANENDRQVQTKKVLNLLKSEEVKRQVGMTDEEVHSMNLTYTLAQVRKYYNNGEIEKSVSEYINNVANASVSNEVRDYNRRKETLLLLNALMVNEEITNKKLREQNKQKLENTYISKEIKKATVKDANYLDKYLNEM
>NZ_AP019845.1|WP_146997579.1|2431531_2432842_+|phosphopyruvate-hydratase
MTRIEDIYAREILDSRGNPTVEVEVYLEGGAMGRASVPSGASTGVHEAVELRDGDKSRYLGQGVLQAVENVNKVIAEHLIGFDALDQVAIDKAMIELDGTPNKGKLGANAILGVSLAVAKAAANQLGIPLYRYLGGVNAKELPVPMMNILNGGSHADSAVDVQEFMVQPVGAKTYKEALRMGSEIFHHLGKILKANGDSTNVGNEGGYAPSNINGTEGALDVISQAVEAAGYKLGDDITFAMDAASSEFATKNADGSYTYTFKREGGVVRNSDEMVEWYKHLTSKYPIVSIEDGLAEDDWDGFKKLTDAIGKDVQLVGDDLFVTNTQRLADGIEKGIANSILIKVNQIGTLTETLDAIEMAKKAGYTAVVSHRSGETEDDTIADIAVATNAGQIKTGSASRTDRMAKYNQLLRIEDDLAEEAVYEGKKAFYNINIK
>NZ_AP019845.1|WP_026749440.1|2433005_2433413_+|adhesion-protein-FadA
MKKVGILFVLLSALSFSAASSKSSKTTTNQTVTGRFNQLEAEYERLVNMENQEYSKLKANAEAASNKLAEKEAQKAQIEERIAKIEAAADSKAFKAQYSELAKQYKAVVKALDSEIKSLSTTVENFAAIEALKGN
>NZ_AP019845.1|WP_026749441.1|2433493_2433907_+|adhesion-protein-FadA
MKKKLAVLLGVLVLSSVSFAAPKAKAAAKPAAGGSIESSLSNLENQLVKLQQMEDAKFREQEAQANAAAQRLSNYTAMQAKIDERIAEIEANVDTSIFGKEFKAKVTEYKNLRNQLDKEIAKEQQVLDNFELIKSLR
>NZ_AP019845.1|WP_026749442.1|2434235_2435126_+|EamA-family-transporter
MQTQKKLHGMLLASLASSLWAISGISGEILFKKFNFSSDWLVSTRTLISGILLFAIVIFIEKKSVLKPLKNKKDCLGIILFGTAGMYLVQYTYFKTIELSNVSFATILQFTAPFFIFVYESAKNRKLPSVSTIILLFMTILGVVFIATKGNFSNLSVSMEALVFGLVSAIMIAFYSTYPKKLLKKYGSITVVGWGMIVGSIISNIIHPIWKIEGNVNAKSIIQVIIVVILGTSIAYLIYIASLNYISSSLAGILTAFEPVLAAILSVIIFGLKFSSVEIVGFVLVFVSIFILEKRL
>NZ_AP019845.1|WP_146999237.1|2435225_2436014_+|META-domain-containing-protein
MKKIFVLIGIFAMFVVNCFILSAAQTVNLNGTSWQLSRIRQNGVNLEIPRNTKITVSFSGNKISGFSGINRYNGTYRVRNNSTLSTDISTTLMGGSEELMNFEMAFLDILQSSPKINYNKETLTLRNSNGDTLSFNKSSNSNNQSDENSLSRLTKELSGTDWKLVNMNGKEVRNAGITISFSGNKINGNSGINSYFSDYIITAGNITIGTVGSTEMAGSDSLMKTERQYLELLQNAKKIELVNKTTLVLTTNRGKTLTFEKL
>NZ_AP019845.1|WP_026749444.1|2436213_2436861_+|C40-family-peptidase
MRKNKFLTAICMLSAFVGSNLHAKTSKTKKVSKPKTSHKPVNNKKSHSGSNTGIYGISSNNKNALIETKMTELRQRHAKAMASGSAQERRKAAVERKLLTSYSKWRGTKYAWGGDSKKGIDCSALTRRVYREAFNKELPRVSQQQIKKGTRVSAKNLKSGDIVYFTPENRTSHTAVYVGNSLFINASSSKGVVMSSLKSPYWRKYFKYGVRAHNT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_AP019845_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019845_8

2502765-2503100

Orphan

I-B

Consensus_repeat	Method
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC	CRISPRCasFinder
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC	CRT
GGTTAAAATAGAGTATCCATTAAAACAAGGATTGAAAC	PILER-CR

4 spacers

The CRISPR arrays of NZ_AP019845_8

>merge|NZ_AP019845|8|2502765-2503100|CRISPRCasFinder,CRT,PILER-CR
AATTTAATCCTTATTTTAATGGATACTCTATTTTAACAAAAGTTCAACGTAAAAAATAAAACACAGTATATTATGTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACAATATATTAATCATAGTATTACCTCTTCTAGGAGATTGTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACCTTGGCAAGTTTGCTTTTATCATTCCTGTGATAACATCGTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACCGTGAATTAGGTTCTGACAAAAGTGATTTTAATATAAAGTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC

>NZ_AP019845|8|7|2502765-2503100|CRISPRCasFinder
AATTTAATCCTTATTTTAATGGATACTCTATTTTAACA	AAAGTTCAACGTAAAAAATAAAACACAGTATATTAT
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACA	ATATATTAATCATAGTATTACCTCTTCTAGGAGATT
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC	TTGGCAAGTTTGCTTTTATCATTCCTGTGATAACATC
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC	GTGAATTAGGTTCTGACAAAAGTGATTTTAATATAAA
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC

>NZ_AP019845|8|5|2502765-2503099|CRT
AATTTAATCCTTATTTTAATGGATACTCTATTTTAAC	AAAAGTTCAACGTAAAAAATAAAACACAGTATATTAT
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC	AATATATTAATCATAGTATTACCTCTTCTAGGAGATT
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC	CTTGGCAAGTTTGCTTTTATCATTCCTGTGATAACATC
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC	CGTGAATTAGGTTCTGACAAAAGTGATTTTAATATAAA
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAAC

>NZ_AP019845|8|6|2502839-2503100|PILER-CR
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACA	ATATATTAATCATAGTATTACCTCTTCTAGGAGATT
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC	TTGGCAAGTTTGCTTTTATCATTCCTGTGATAACATC
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC	GTGAATTAGGTTCTGACAAAAGTGATTTTAATATAAA
GTTTCAATCCTTGTTTTAATGGATACTCTATTTTAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019845.1\|WP_146999273.1\|2501802_2502567_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100079
NZ_AP019845.1\|WP_146997627.1\|2514611_2514854_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146999275.1\|2503764_2505594_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_AP019845.1\|WP_146999271.1\|2498851_2499442_-\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|224653
NZ_AP019845.1\|WP_146999277.1\|2510052_2511555_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146999270.1\|2496132_2497302_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_AP019845.1\|WP_146997612.1\|2494265_2495984_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_AP019845.1\|WP_146999269.1\|2492594_2494100_-\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|223708
NZ_AP019845.1\|WP_146999268.1\|2491839_2492523_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NZ_AP019845.1\|WP_146999278.1\|2511680_2512433_+\|phosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213223
NZ_AP019845.1\|WP_051354388.1\|2497505_2497793_-\|TM2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377473
NZ_AP019845.1\|WP_146999279.1\|2512442_2513237_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273441
NZ_AP019845.1\|WP_146999276.1\|2506348_2507881_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|234660
NZ_AP019845.1\|WP_146999274.1\|2503404_2503716_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146997621.1\|2508405_2508693_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|224278
NZ_AP019845.1\|WP_146999272.1\|2499667_2500786_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146997622.1\|2508918_2509812_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|379040
NZ_AP019845.1\|WP_026748112.1\|2497842_2498202_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_AP019845.1\|WP_146997616.1\|2500803_2501685_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019845.1\|WP_146999280.1\|2513257_2514076_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273441

Protein	Function_ID	Function_description	E-value
NZ_AP019845.1\|WP_146999273.1\|2501802_2502567_-\|site-2-protease-family-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	1.50305e-55
NZ_AP019845.1\|WP_146999275.1\|2503764_2505594_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_AP019845.1\|WP_146999271.1\|2498851_2499442_-\|YigZ-family-protein	gnl\|CDD\|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	2.84556e-51
NZ_AP019845.1\|WP_146999280.1\|2513257_2514076_+\|ABC-transporter-permease-subunit	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	1.01556e-53
NZ_AP019845.1\|WP_146999270.1\|2496132_2497302_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.41661e-30
NZ_AP019845.1\|WP_146997612.1\|2494265_2495984_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP019845.1\|WP_146999269.1\|2492594_2494100_-\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|223708	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism].	4.24971e-80
NZ_AP019845.1\|WP_146999268.1\|2491839_2492523_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	3.06265e-79
NZ_AP019845.1\|WP_146999278.1\|2511680_2512433_+\|phosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213223	cd03256, ABC_PhnC_transporter, ATP-binding cassette domain of the binding protein-dependent phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only prokaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.08909e-128
NZ_AP019845.1\|WP_051354388.1\|2497505_2497793_-\|TM2-domain-containing-protein	gnl\|CDD\|377473	pfam05154, TM2, TM2 domain. This family is composed of a pair of transmembrane alpha helices connected by a short linker. The function of this domain is unknown, however it occurs in a wide range or protein contexts.	4.72357e-08
NZ_AP019845.1\|WP_146999279.1\|2512442_2513237_+\|ABC-transporter-permease-subunit	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	1.93502e-54
NZ_AP019845.1\|WP_146997621.1\|2508405_2508693_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	8.75696e-27
NZ_AP019845.1\|WP_146997622.1\|2508918_2509812_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|379040	pfam13145, Rotamase_2, PPIC-type PPIASE domain.	4.2284e-10
NZ_AP019845.1\|WP_026748112.1\|2497842_2498202_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.02773e-21
NZ_AP019845.1\|WP_146999276.1\|2506348_2507881_-\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl\|CDD\|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0

>NZ_AP019845.1|WP_146999273.1|2501802_2502567_-|site-2-protease-family-protein
MKIVKNYYNRFKVLNPEYSEIKLGIIVAIIIYFIAKIFFAVEISRDMIISLVVFVISMTLHEVAHGYVAYKFGDDTAKREGRITLNPLKHIDLTGIILPILILLSGFKFLVGWAKPVPVNFYNLRPHRLGLFCVAIAGIVVNFTLSAISLVLLKFLGKHLEIENIFMTILLYIYSINLLLGLFNLIPITPLDGGRIVYSFSGEKIRAFYNKIERYGILIIFVIVYLGSSHLTNGFFAIVEFFLRLAGINISLIF
>NZ_AP019845.1|WP_146997616.1|2500803_2501685_-|hypothetical-protein
MKKLFLILGIFLMMNFGVYGFSQKEKIQETLSKLGVKQALIDETVALDYEIRDTQYFENDEKIIRERVEKLEKLLQKDERNYIVAQALITIFESKISGDYKKYLDLFVKYTPYEYEKTFSKMMYALDKGDMPSFEKYMDEIPKKYNDTVVVTLAKIFVAKDFEEKQMLTEKVLKLLKNESERRKVGVSDEEYYFMKLTYYLNKIRNLFDKGEVKQAVSEYLNNIVNESVSEEIQNYNLRAEVILYFNVVIMNEEIKEDLLKISNGAKLEDTWIAKKIQAETEKDKDFLSKMVN
>NZ_AP019845.1|WP_146999272.1|2499667_2500786_-|hypothetical-protein
MKKIFISLSLPFFLTLGCELSAYTRAELIQDRLSKIGIKQDVIDETIKFEYEIKDEKNFFTEDGQENDNLLKLKKIYEKDERNETLGAVLVGAYMVGEKKNFRKAREYMDKIAPYSTQFDKLSNEFTYYKLKGDEKKAKFYYNLIKRRYKNSIVMELVDTLSENLDMVMFIETLGDYLVEDEKKPNTEANDLPDGFSYDNKKGIIQNKDAADDSDKDAENVLEDTRTYGESVKEILDSGKETLENQKKEINKYQRIIDYFKIGKNQKDFGIPDDYVRGFELKIAEIKIAKNMMNYGIENAVKYYLDNVSTKDVSYEDVYFNEQSELALYLAVAQMLSVADENVMNKYRKEFENTRVIKLLDEILKNERKNNY
>NZ_AP019845.1|WP_146999271.1|2498851_2499442_-|YigZ-family-protein
MKTVQKETIIEFEEKKSKFIGYIKPVSTVNEAEKFIDSIKKMHSNATHNVPLYRVMENGQEYFKYNDDGEPSNTAGKPMAEILNILDVYNVAIVATRYFGGIKLGAGGLIRNYAKTAKLAVNEAEIVEYVEKSIFILDYDYEYTSEIETFLNANTLKFGIEILEKNYSNRVTMKISASDEIEHELNGLQKIIVIKM
>NZ_AP019845.1|WP_026748112.1|2497842_2498202_-|YbaB/EbfC-family-nucleoid-associated-protein
MVRKIKGAGSKSGGNQQDIIKKAQVMQQEMLKIQEGLKDKFVETSVAGGGITVKANGQKKIVDLSISLDVLKDAIEENDATIVSDLIVNAVNEILDKAEEMAEKEMEVVTGGVSIPGLF
>NZ_AP019845.1|WP_051354388.1|2497505_2497793_-|TM2-domain-containing-protein
MSETNLPENIENEKPKYNKVIYCLLAWFFGAFGIHSFYAGRKQEGIYFLIAGIIGVLTYILLVGMVILFVEFVICVIQIIKAVQKPADEFGRISD
>NZ_AP019845.1|WP_146999270.1|2496132_2497302_-|MFS-transporter
MKKNIDKMIILMFLCIIVYNLGHPATPALIELRGWKKSISGELLAFMSTAMFISSPYLGALADRVGMKRIFMFMPVCYGMSQLIFGFGTNLPLIFLARMISGFASGGTYAVAFGYVSQLSEKGEKAKNIAKVSSATVIGGAIGQKIGGFAATAMDDPRFSFALQFVGGSIVSIIILLIMKEIVKKDSNLVEEKSKKDLNPFATFRYIKELDGYSKFFCLIILLSGIGIYSYGSALNYFLKFYEKVSSDTIGTFVMCSSLLAFFGTAFLLGKLLKKFKEKSIYKFLIFVGIILMAGIFFRVKLGVTPYILMAVYTMTYEIVRSLGNTIIAQRYRENQGKILGVASAVGSLGTAIGSLLSGHLLNFNPFLPFIVNIIVMSFVLVLILVKKL
>NZ_AP019845.1|WP_146997612.1|2494265_2495984_-|phospho-sugar-mutase
MEYMKKYEYWLNSEAVDEKDKEELRSLSGNEKEIEDRFFKDLSFGTGGIRGVRGIGTNRINKYVIRKATQGLANYMLGFDEKLAKEKGIIIAHDCRIGSREYALNTARVMAANGIKAYIYEDLRSTPELSFGVRYKGTMAGIVVTASHNPVEYNGYKVYWDDGAQVVDPHAPAIVAEVNKIQTLEEIKVISEAEGREKGLIIQLDGKIDDDYLDAIKTQTLKTNVPGKENFKIVYTPLHGTGGRPMKRILSDFGYSYEVVKEQIEPDGNFPTVTYANPEEKAAFALGTKQADEIGAKLVMANDPDADRIGIAVKDDKNEWYYPNGNQVGLLLLQYLLNNKKDIPANAKVITTVVSTPMIDVVAPSKNVGVMKTLTGFKYIGEKIRQFENKELDGTYLFGFEESYGYLIGTHARDKDALVTSMVIAEMATYYDSIGSSIYEELQKLYKEFGYYLEGIKSVTLKGKDGIEQMAALMANLRENVKDELLGKKIKIKRDFFSHKEYNLETGAETEIKLPKENVLQFVLEDDTYITARPSGTEPKIKFYFSVNADSNENVKAKLDKTMKEFSEFLGL
>NZ_AP019845.1|WP_146999269.1|2492594_2494100_-|radical-SAM-family-heme-chaperone-HemW
MIEIKEKNIDAIYIHIPFCDKKCEYCDFCTFVRMEKEYRRYVNYLIREIRMYPKFKYDTIYFGGGTPSVLPVGMIKEVMDELEWTGNAEITLELNPTDMTLEKLRKIRETGINRLSIGIQSFQNHVLKFIGRQHSSEEAINVYKMARKAGFENITVDLMFGIPNQSIEDLQKDLEILKKLRPENVSIYSLIWEEGTVFWSKLQKGILSEIDQDVEAQMYEMIIEFFNENGYCHYEISNFCRINGNFEGNRNINKNYNLEKKIDFQNFSEIKNDEVYNFGLQNRIYENDISENVNFAKIRTENRILENNNLKNQKLENKLLENVENFEIIKGRQKNGGRHNLKYWRNKKFIGVGMSAAAYYGENRHSNVRTFKKYYNLIDSANLPIDESTIEVVDEIESEKLKKMLGLRLIQEGIEYFEDKRVEKLIKNGLLEKFVVKKMDFSEKKVEKIEKFIITKEKEIKNKVKNNEYFNEKVDGNPYEIRLRLTKKGMMLANDVFVEFI
>NZ_AP019845.1|WP_146999268.1|2491839_2492523_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MELDSIKIHKNYGKILEDIKKYSPYPEKVKILFVSKYFNVEEHKALIEMGYDYFGENRAQLYRDKLNEFSDKKYKNIKWDFIGRLQKNKIKYIINSVNLIHSIDSYELLDEINKKAIENNRVINGLVQINVSKEESKTGVYIEDFKKDSGKYFSISNVKIAGFMTMAPLEASEDEINDYFSNMRKLKEEYQKQYDYVTEISMGMSNDYIEALKNGATIIRIGSKLFE
>NZ_AP019845.1|WP_146999274.1|2503404_2503716_-|hypothetical-protein
MNFDDLKKGAEDALKKTVDGAKDLADKAVDKTKEIAGSEVAQNIKKGTEDVLGKTVEGAKDLADKAANNKIVQDVKKGAEEAVDKTVEGAKGLADKVTGMFKK
>NZ_AP019845.1|WP_146999275.1|2503764_2505594_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGAKNAQEFVIDGLEKLEYRGYDSAGIAVNTGNEKFEIVKKVGRLQNLADELKKHPLSGTVAIGHTRWATHGKPSDENSHPHFNKDKTLVVVHNGIIENYLELKKDLVTKGYEFKSETDTEVVAHLLDELYTGDLLETVKKLLKVIKGAYALGIMSVNEPDRIIAARKESPLIVGLGDGENFIASDIPAILKYTRDVYLIENNEIVEIKKDSVKIMDVDGNEIKRDVTHIEWDLEAASKGGYEYFMEKEIFEQPEVLVKTLNSRVDENYNINFDDAGLTKEYLSGINDIYIVACGTAYHAGLAGKHIIEKKTRIRVDVDIASEFRYRNPVINDKALVVVLSQSGETLDTLEAMKEAKRHGARVVAITNVVGSSIAREADHVIYTWAGPEIAVASTKAYTTQMVILNLMAIDFAYKFGKITKDEAIKYIKKLYEVEQSIQKMLEYNEKIKDVADKIKDSESMFYLGRGLDYVIAVEGALKSKEISYIHSEAFASGELKHGTIALITDGVPVVVNVTQSDLFEKSVSNIKEVTSRGAYVIAIAKEGNTVVEEVADEVFYIPDVEDDYAGFPTIVIHQLLAYYLSKLKGNDVDKPRNLAKSVTVE
>NZ_AP019845.1|WP_146999276.1|2506348_2507881_-|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MYKMFKDVEYKVLKDGKNFEIKGIEYDSRKISKDFVFVAMSGSAVDGHSFIQKAIDGGAKMIIVERNVDMAEYKNAADITFVLVEDIRKKLGTIASNYYGYPQDKIKIIGITGTNGKTTSSFILENILEKTARIGTTGNRILDEEFETVNTTPESLELIKLIDKSVKKGADYFIMEVSSHALEIGRVDMLQFDSAIFTNLTQDHLDFHKTMENYFNAKKKLFSMLRNDKKNNGTGVINIDDEYGSKIYSEKKSSNYISIGVRNEEADIWGDIVNYTNNGMKVKIDLKNYLEKTNPRLKDINEEHKEEYKFEVDLVGEYNLYNILGCVASALSLGIEMSYIVKKLERMPAVPGRFETIKNDLEVRIVVDFAHTDDGLLNVGKTLKQITDNQVITIFGAGGDRDHEKRPKMAKAAAKFSDYIILTSDNPRTENPVKILADIEKGLIEEKYPFDKYLIIADRKRAIKHGMKLLQKGDSLLIAGKGHETYQIIGTEKTHFDDREVVRDILEEME
>NZ_AP019845.1|WP_146997621.1|2508405_2508693_+|antibiotic-biosynthesis-monooxygenase
MIHILASFQVKNDKLSDFIKLCNELIEESRKEEGCISYHLQQNTEKENQFVFVEEWKSNEAIKKHNSSEHFTRIVPLLVEMCENAPVIQTFNRII
>NZ_AP019845.1|WP_146997622.1|2508918_2509812_+|peptidyl-prolyl-cis-trans-isomerase
MKNKIKIGVLTLLCIFAMSCGNGGQNGKVLFESSDKKIKVYESEVNNELEKGLFSNGLTEKDLTPEQITQMKQSIIKNIAINRAIALKGKEQKLNKDKKYTESQNILQEQLLANLAIFNELNDKAKISDQDAKNIYDANAANFTRQEDSVRLQLIVFNTSDSAKANQVLKEAVANPANFTAYAQKYNASIQGVAENGETQEIPLSQLESRFGPLNEAIKNVAAGQIVNSVVTVGNDLYIVKVLEKNAKGLIPFEKVKEAIKTQLRNQKRQAEQQKFIKSITDEYKLSNIDEAIKNIK
>NZ_AP019845.1|WP_146999277.1|2510052_2511555_+|hypothetical-protein
MKILKYLLSLVLIVLIMLLFGVMFSSNIVSYMTKTKHSEFENVKFSIKNSEMNFDNFVVNGKSLGKGRATVGVVRTGLFNLVPKLTLSNLKLEDVNLDGIYKEKSSYIDTFTDKINSLTTQEKADKSTADFIKETTNKVTTLTTNTDNFINSKLRENIEKVNVLKQDYVGLTDLKSKAQKIVELNNEIKPLAKAINVEKENIEKNISEIEMERNIALTNISDNLTKLEKEISLNDFNNINSNNNAQNMNLYIFLDKGKDLETSLNTALKATALIKEIKDLNMRISDINVNDGKIVARGLDGSNAQVNGEVLLENNAKSLIKGLNNGYEITYNKDNFTSKTLFAANKISSVIEYAKNDLLEGKVIKLASELVLENNNFKNLNHTVLTDEEKTLLTQKIENLRNNNYQQIMTKYEEDNKNIEALIDNVYVQKNKLDKLQKDLLSLGTIIKFEQPTNNAAAENNNQTNNSTINILNNSNNNTDNNIKNQNENQNSNKINIGNR
>NZ_AP019845.1|WP_146999278.1|2511680_2512433_+|phosphonate-ABC-transporter-ATP-binding-protein
MLLSIKNVSKKYDNGTIALKNVSFDVEKGEFISVIGPSGSGKSTLLRSINKMIDISEGSILFEDKNIENLKKGEIELVRREIGMIFQNYNLVERLTVIENVLHGRLGYKSIIAGILGIYSEEEKKEAFNFLEKVNMTKYAYQKCNELSGGQKQRVGIARAIMQKPKLLLCDEPIASLDPKTAENIMDYLKKIVSELKITCIVNLHQVDIAKKYSDRIIALNKGEKIFDDKTGRLTDDMIEFIYKDEEQTQ
>NZ_AP019845.1|WP_146999279.1|2512442_2513237_+|ABC-transporter-permease-subunit
MNLNEKDIFKRRFYSKIIFLSIIILIYTISSIISGFQNGMAFSSIPAGIFWLLQKFIPTQNALQYFPEIMDSAIKTVLLAITSTTVSATFALFLAIIGSNSTGINIFTKITTKVIASFFRNIPIVAWALILVFSFKQSQFTGFLALFLITFGYLTRAFSETIDDVAGDVIEALKSVGASYFQIIFCGVIPSVSSQLLSWLLFFIETGVRESTLIGILTGTGIGFTFSLYYKSFRYDAAGLVILIVTVIVIGIELLSNKLRKEMM
>NZ_AP019845.1|WP_146999280.1|2513257_2514076_+|ABC-transporter-permease-subunit
MNFLLEKIRIKKLTKSKIYLYITLSLLSIITIYTLVTMDFGGVNITKATGHFFKDLGTMFFSPKLSERNTFNQILFSLAVTIALAALTTIIGSFIALFLSFFAAQNLSNRYISRTIKLGISFIRAIPTILWVMVFSVVANVGVEAAIIGMTFHSVAYLVKAYSESIEEIDNGIIEALRATGSSFWKIIFQAVLPSTITSLLSWTFIRFEINFTNAVLVGAAAGAGGIGYDMFMSGSMYFDIREIGVFVYLIFGVAIILELISYLLKRKYLKN
>NZ_AP019845.1|WP_146997627.1|2514611_2514854_+|hypothetical-protein
MKKLISIVIFLITCIFSFGNDWEFESRGEHLIPLQISNMAIKKEKLEFNLRDDNFMEVSVNFVFDSLSLQNLDMTFLKKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_AP019845_6	6.4\|1534057\|38\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1534057-1534094	38	NZ_AP019845.1	2308749-2308786	1.0
NZ_AP019845_6	6.4\|1534057\|38\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1534057-1534094	38	NZ_AP019845.1	2327185-2327222	1.0
NZ_AP019845_8	8.3\|2502951\|37\|NZ_AP019845\|CRISPRCasFinder,PILER-CR	2502951-2502987	37	NZ_AP019845.1	184050-184086	1.0
NZ_AP019845_8	8.7\|2502950\|38\|NZ_AP019845\|CRT	2502950-2502987	38	NZ_AP019845.1	184050-184087	1.0

1. spacer 6.4|1534057|38|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to position: 2308749-2308786, mismatch: 0, identity: 1.0

attttaagtcctctctcatacccaacagaacttccaaa	CRISPR spacer
attttaagtcctctctcatacccaacagaacttccaaa	Protospacer
**************************************

2. spacer 6.4|1534057|38|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to position: 2327185-2327222, mismatch: 0, identity: 1.0

attttaagtcctctctcatacccaacagaacttccaaa	CRISPR spacer
attttaagtcctctctcatacccaacagaacttccaaa	Protospacer
**************************************

3. spacer 8.3|2502951|37|NZ_AP019845|CRISPRCasFinder,PILER-CR matches to position: 184050-184086, mismatch: 0, identity: 1.0

ttggcaagtttgcttttatcattcctgtgataacatc	CRISPR spacer
ttggcaagtttgcttttatcattcctgtgataacatc	Protospacer
*************************************

4. spacer 8.7|2502950|38|NZ_AP019845|CRT matches to position: 184050-184087, mismatch: 0, identity: 1.0

cttggcaagtttgcttttatcattcctgtgataacatc	CRISPR spacer
cttggcaagtttgcttttatcattcctgtgataacatc	Protospacer
**************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019845_6	6.4\|1534057\|38\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1534057-1534094	38	NZ_AP019837	Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p2, complete sequence	21122-21159	0	1.0
NZ_AP019845_1	1.1\|618766\|27\|NZ_AP019845\|PILER-CR	618766-618792	27	NZ_CP010683	Phaeobacter piscinae strain P14 plasmid pP14_b, complete sequence	13192-13218	6	0.778
NZ_AP019845_1	1.1\|618766\|27\|NZ_AP019845\|PILER-CR	618766-618792	27	NZ_CP010718	Phaeobacter piscinae strain P18 plasmid pP18_c, complete sequence	13192-13218	6	0.778
NZ_AP019845_3	3.20\|1101279\|36\|NZ_AP019845\|CRISPRCasFinder,CRT	1101279-1101314	36	MK448590	Streptococcus satellite phage Javan634, complete genome	9466-9501	7	0.806
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MN694674	Marine virus AFVG_250M850, complete genome	1157-1191	7	0.8
NZ_AP019845_3	3.20\|1101279\|36\|NZ_AP019845\|CRISPRCasFinder,CRT	1101279-1101314	36	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	619567-619602	8	0.778
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MG592416	Vibrio phage 1.032.O._10N.261.54.F5, partial genome	15237-15271	8	0.771
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MG592492	Vibrio phage 1.118.A._10N.261.49.F6, partial genome	12278-12312	8	0.771
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MN693355	Marine virus AFVG_25M40, complete genome	5648-5682	8	0.771
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MG592493	Vibrio phage 1.118.B._10N.261.49.F6, partial genome	12278-12312	8	0.771
NZ_AP019845_3	3.16\|1101020\|36\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1101020-1101055	36	AB897757	Klebsiella phage K64-1 DNA, complete genome	166138-166173	9	0.75
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MF360958	Salicola phage SCTP-2, complete genome	158015-158049	9	0.743
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MN692958	Marine virus AFVG_117M8, complete genome	49516-49550	9	0.743
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MN694278	Marine virus AFVG_250M229, complete genome	49504-49538	9	0.743
NZ_AP019845_8	8.1\|2502803\|36\|NZ_AP019845\|CRISPRCasFinder	2502803-2502838	36	MN693989	Marine virus AFVG_250M851, complete genome	11207-11242	9	0.75
NZ_AP019845_8	8.1\|2502803\|36\|NZ_AP019845\|CRISPRCasFinder	2502803-2502838	36	MN694758	Marine virus AFVG_250M853, complete genome	22604-22639	9	0.75
NZ_AP019845_8	8.1\|2502803\|36\|NZ_AP019845\|CRISPRCasFinder	2502803-2502838	36	MN694077	Marine virus AFVG_250M852, complete genome	22610-22645	9	0.75
NZ_AP019845_4	4.1\|1110420\|36\|NZ_AP019845\|CRISPRCasFinder,CRT	1110420-1110455	36	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	1368260-1368295	10	0.722
NZ_AP019845_4	4.7\|1110811\|35\|NZ_AP019845\|CRISPRCasFinder,CRT,PILER-CR	1110811-1110845	35	MT121964	Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds	48230-48264	10	0.714
NZ_AP019845_8	8.5\|2502802\|37\|NZ_AP019845\|CRT	2502802-2502838	37	MN693989	Marine virus AFVG_250M851, complete genome	11206-11242	10	0.73
NZ_AP019845_8	8.5\|2502802\|37\|NZ_AP019845\|CRT	2502802-2502838	37	MN694758	Marine virus AFVG_250M853, complete genome	22604-22640	10	0.73
NZ_AP019845_8	8.5\|2502802\|37\|NZ_AP019845\|CRT	2502802-2502838	37	MN694077	Marine virus AFVG_250M852, complete genome	22610-22646	10	0.73

1. spacer 6.4|1534057|38|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019837 (Leptotrichia wadei strain JMUB3934 plasmid pJMUB3934p2, complete sequence) position: , mismatch: 0, identity: 1.0

attttaagtcctctctcatacccaacagaacttccaaa	CRISPR spacer
attttaagtcctctctcatacccaacagaacttccaaa	Protospacer
**************************************

2. spacer 1.1|618766|27|NZ_AP019845|PILER-CR matches to NZ_CP010683 (Phaeobacter piscinae strain P14 plasmid pP14_b, complete sequence) position: , mismatch: 6, identity: 0.778

tgattcaaggaactcataagacgggat	CRISPR spacer
ccattcaaggcattcataagacgggtc	Protospacer
. ******** *.************ .

3. spacer 1.1|618766|27|NZ_AP019845|PILER-CR matches to NZ_CP010718 (Phaeobacter piscinae strain P18 plasmid pP18_c, complete sequence) position: , mismatch: 6, identity: 0.778

tgattcaaggaactcataagacgggat	CRISPR spacer
ccattcaaggcattcataagacgggtc	Protospacer
. ******** *.************ .

4. spacer 3.20|1101279|36|NZ_AP019845|CRISPRCasFinder,CRT matches to MK448590 (Streptococcus satellite phage Javan634, complete genome) position: , mismatch: 7, identity: 0.806

caaataagaagaaaaatatttgaaaaataaaaagta	CRISPR spacer
catgagaaaagaaaaatatttgaaacataaaaagaa	Protospacer
** . .*.***************** ******** *

5. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MN694674 (Marine virus AFVG_250M850, complete genome) position: , mismatch: 7, identity: 0.8

tctttaatatattttcttattaattttgaaatact-----	CRISPR spacer
tctttaatatattttattattaattt-----tatttgtga	Protospacer
*************** **********     **.*

6. spacer 3.20|1101279|36|NZ_AP019845|CRISPRCasFinder,CRT matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

caaataagaagaaaaatatttgaaaaataaaaagta	CRISPR spacer
aagattcgaagaaaaatatttcagaaataaaaaatg	Protospacer
 *.**  ************** *.*********.*.

7. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MG592416 (Vibrio phage 1.032.O._10N.261.54.F5, partial genome) position: , mismatch: 8, identity: 0.771

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
tcttttatatattttcttattattttctatatttc	Protospacer
***** **************** ***. * ** ..

8. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MG592492 (Vibrio phage 1.118.A._10N.261.49.F6, partial genome) position: , mismatch: 8, identity: 0.771

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
tcttttatatattttcttattattttctatatttc	Protospacer
***** **************** ***. * ** ..

9. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MN693355 (Marine virus AFVG_25M40, complete genome) position: , mismatch: 8, identity: 0.771

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
ctttatagttattttcttattattttttaaatact	Protospacer
..**  *  ************* **** *******

10. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MG592493 (Vibrio phage 1.118.B._10N.261.49.F6, partial genome) position: , mismatch: 8, identity: 0.771

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
tcttttatatattttcttattattttctatatttc	Protospacer
***** **************** ***. * ** ..

11. spacer 3.16|1101020|36|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 9, identity: 0.75

ggttaaaaa---acaagaaaaaattgattataataaatt	CRISPR spacer
---tacatgttcacaagaagaaattgattctaataaatc	Protospacer
   ** * .   *******.********* ********.

12. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 9, identity: 0.743

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
tctttaatatattttattaataattattgttatct	Protospacer
*************** *** ***** * .    **

13. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MN692958 (Marine virus AFVG_117M8, complete genome) position: , mismatch: 9, identity: 0.743

tctttaatatattttcttattaatt-------ttgaaatact	CRISPR spacer
tctttaatattttttcttagtaattcattttcttg-------	Protospacer
********** ******** *****       ***

14. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MN694278 (Marine virus AFVG_250M229, complete genome) position: , mismatch: 9, identity: 0.743

tctttaatatattttcttattaatt-------ttgaaatact	CRISPR spacer
tctttaatattttttcttagtaattcattttcttg-------	Protospacer
********** ******** *****       ***

15. spacer 8.1|2502803|36|NZ_AP019845|CRISPRCasFinder matches to MN693989 (Marine virus AFVG_250M851, complete genome) position: , mismatch: 9, identity: 0.75

aaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
taggaggaacataaaaaataaaacacaatatatagt	Protospacer
 *.*   ***.****************.***** .*

16. spacer 8.1|2502803|36|NZ_AP019845|CRISPRCasFinder matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 9, identity: 0.75

aaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
taggaggaacataaaaaataaaacacaatatatagt	Protospacer
 *.*   ***.****************.***** .*

17. spacer 8.1|2502803|36|NZ_AP019845|CRISPRCasFinder matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 9, identity: 0.75

aaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
taggaggaacataaaaaataaaacacaatatatagt	Protospacer
 *.*   ***.****************.***** .*

18. spacer 4.1|1110420|36|NZ_AP019845|CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.722

tatatttataaatatcttgctgtttaaaaatactgg	CRISPR spacer
ataaaatataaatattttgttgtttaaaaatatttt	Protospacer
   *  *********.***.************.*

19. spacer 4.7|1110811|35|NZ_AP019845|CRISPRCasFinder,CRT,PILER-CR matches to MT121964 (Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds) position: , mismatch: 10, identity: 0.714

tctttaatatattttcttattaattttgaaatact	CRISPR spacer
tttttaatatattttcttatagattttcgtagttc	Protospacer
*.****************** .***** . *  ..

20. spacer 8.5|2502802|37|NZ_AP019845|CRT matches to MN693989 (Marine virus AFVG_250M851, complete genome) position: , mismatch: 10, identity: 0.73

aaaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
ctaggaggaacataaaaaataaaacacaatatatagt	Protospacer
  *.*   ***.****************.***** .*

21. spacer 8.5|2502802|37|NZ_AP019845|CRT matches to MN694758 (Marine virus AFVG_250M853, complete genome) position: , mismatch: 10, identity: 0.73

aaaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
ctaggaggaacataaaaaataaaacacaatatatagt	Protospacer
  *.*   ***.****************.***** .*

22. spacer 8.5|2502802|37|NZ_AP019845|CRT matches to MN694077 (Marine virus AFVG_250M852, complete genome) position: , mismatch: 10, identity: 0.73

aaaagttcaacgtaaaaaataaaacacagtatattat	CRISPR spacer
ctaggaggaacataaaaaataaaacacaatatatagt	Protospacer
  *.*   ***.****************.***** .*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

136870 : 171164

Clostridioides_phage(25.0%)

integrase,head,tail,transposase,tRNA

attL 134377:134392|attR 169110:169125

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
134377:134392	attL	NA	NA	NA	NA
WP_146995788.1\|136870_137836_-\|integrase	tyrosine-type recombinase/integrase	A0A2R2ZGM9	Clostridioides_phage	2.1e-21	26.3
WP_146997963.1\|138136_139831_+	M3 family oligoendopeptidase	NA	NA	NA	NA
WP_026749581.1\|139962_140880_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	8.2e-92	57.0
WP_036095876.1\|141031_141580_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_026749583.1\|141745_142240_+	flavodoxin	NA	NA	NA	NA
WP_146997964.1\|142732_145819_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_026749584.1\|146143_146419_+	hypothetical protein	NA	NA	NA	NA
WP_146997965.1\|146658_147549_+	mevalonate kinase	NA	NA	NA	NA
WP_146997966.1\|147570_148557_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_146997967.1\|148873_150541_+	hypothetical protein	NA	NA	NA	NA
WP_146997968.1\|150566_151406_+	hypothetical protein	NA	NA	NA	NA
WP_146997969.1\|151428_152622_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_146997970.1\|152729_153824_+	hypothetical protein	NA	NA	NA	NA
WP_146997971.1\|153856_155185_+	hypothetical protein	NA	NA	NA	NA
WP_146997972.1\|155201_157277_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.0e-44	35.1
WP_146995796.1\|157326_157797_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_146995797.1\|157809_158232_+	hypothetical protein	NA	NA	NA	NA
WP_026749595.1\|158252_158624_+	DUF1934 family protein	NA	NA	NA	NA
WP_026749596.1\|158872_160357_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.9e-94	41.0
WP_172618277.1\|165987_166194_-	hypothetical protein	NA	NA	NA	NA
WP_172618278.1\|166183_166513_-\|transposase	transposase	NA	NA	NA	NA
WP_146997973.1\|166581_167121_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618279.1\|167373_167604_-	hypothetical protein	NA	NA	NA	NA
WP_172618280.1\|167593_167995_-\|transposase	transposase	NA	NA	NA	NA
WP_172618281.1\|167942_168539_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_026748415.1\|168917_169349_+	hypothetical protein	NA	NA	NA	NA
169110:169125	attR	NA	NA	NA	NA
WP_146997974.1\|170046_170598_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_146997975.1\|170687_171164_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA

DBSCAN-SWA_2

502755 : 534836

Fusobacterium_phage(100.0%)

integrase,transposase

attL 499626:499642|attR 533572:533588

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
499626:499642	attL	NA	NA	NA	NA
WP_172618291.1\|502755_503049_-\|transposase	transposase	NA	NA	NA	NA
WP_172618292.1\|502954_503182_-\|transposase	transposase	NA	NA	NA	NA
WP_172618293.1\|503198_503351_+	hypothetical protein	NA	NA	NA	NA
WP_146998084.1\|503328_503724_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_146998143.1\|504092_504947_+	Rha family transcriptional regulator	A0A0E3Y6H2	Fusobacterium_phage	2.0e-07	28.5
WP_146998144.1\|504967_505291_+	hypothetical protein	NA	NA	NA	NA
WP_146998145.1\|505305_505515_+	hypothetical protein	NA	NA	NA	NA
WP_172618294.1\|505539_505704_+	hypothetical protein	NA	NA	NA	NA
WP_146998146.1\|505694_506492_+	hypothetical protein	NA	NA	NA	NA
WP_172618295.1\|506569_506737_+	hypothetical protein	NA	NA	NA	NA
WP_026745788.1\|506702_506909_+	hypothetical protein	NA	NA	NA	NA
WP_146998147.1\|506918_507209_+	hypothetical protein	NA	NA	NA	NA
WP_146998148.1\|507918_508671_+	protein rep	NA	NA	NA	NA
WP_146998149.1\|508689_508908_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_146998150.1\|508983_510042_+\|integrase	tyrosine-type recombinase/integrase	A0A0E3Y5J2	Fusobacterium_phage	2.5e-36	34.9
WP_084533582.1\|510396_510570_-	FeoB-associated Cys-rich membrane protein	NA	NA	NA	NA
WP_146998151.1\|510690_512883_-	ferrous iron transport protein B	NA	NA	NA	NA
WP_012806491.1\|512879_513098_-	FeoA domain-containing protein	NA	NA	NA	NA
WP_026748536.1\|514621_515611_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_146996050.1\|515626_516442_+	mannose/fructose/sorbose family PTS transporter subunit IIC	NA	NA	NA	NA
WP_026748538.1\|516461_517379_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_026748539.1\|517513_517888_+	DUF956 family protein	NA	NA	NA	NA
WP_146998152.1\|518174_519218_+	hypothetical protein	NA	NA	NA	NA
WP_146998153.1\|519495_520245_-	precorrin-3B C(17)-methyltransferase	NA	NA	NA	NA
WP_026748542.1\|520394_520907_-	HXXEE domain-containing protein	NA	NA	NA	NA
WP_146998154.1\|520909_521923_-	cobalt-precorrin 5A hydrolase	NA	NA	NA	NA
WP_146998155.1\|521969_522950_-	hypothetical protein	NA	NA	NA	NA
WP_146998156.1\|522993_523761_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_146998157.1\|523776_524139_-	DUF488 family protein	NA	NA	NA	NA
WP_146996057.1\|524620_525868_+	serine hydrolase	NA	NA	NA	NA
WP_146998158.1\|525957_526236_-\|transposase	transposase	NA	NA	NA	NA
WP_146996058.1\|526458_527244_+	glutamate racemase	NA	NA	NA	NA
WP_026748550.1\|527300_527936_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_146998159.1\|533615_534836_-\|transposase	IS110 family transposase	NA	NA	NA	NA
533572:533588	attR	NA	NA	NA	NA

DBSCAN-SWA_3

617269 : 688889

Aeribacillus_phage(25.0%)

integrase,transposase

attL 623962:623980|attR 691378:691396

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172618299.1\|617269_617815_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618365.1\|617811_618237_+\|transposase	transposase	NA	NA	NA	NA
WP_172618279.1\|618203_618434_+	hypothetical protein	NA	NA	NA	NA
WP_146998208.1\|619156_622663_-	hypothetical protein	NA	NA	NA	NA
WP_146998209.1\|622692_623109_-	antitoxin HicB	A0A1L2JY34	Aeribacillus_phage	2.2e-15	46.5
WP_146998210.1\|623470_623653_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_026749337.1\|623893_624100_-	preprotein translocase subunit SecG	NA	NA	NA	NA
623962:623980	attL	NA	NA	NA	NA
WP_146998211.1\|624163_624931_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_026745616.1\|625113_625524_+	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_146996110.1\|626244_626439_-	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA
WP_146998212.1\|626441_627155_-	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.0e-17	28.5
WP_146998213.1\|627191_628883_-	FTR1 family protein	NA	NA	NA	NA
WP_026748232.1\|628860_630099_-	deferrochelatase/peroxidase EfeB	NA	NA	NA	NA
WP_026748233.1\|630225_631107_-	EfeM/EfeO family lipoprotein	NA	NA	NA	NA
WP_172618300.1\|631404_632571_-\|transposase	transposase	NA	NA	NA	NA
WP_026748234.1\|632841_633321_+	hypothetical protein	NA	NA	NA	NA
WP_146996115.1\|633639_634482_+	NAD(+)/NADH kinase	NA	NA	NA	NA
WP_146998214.1\|634573_636253_+	DNA repair protein RecN	NA	NA	NA	NA
WP_146996117.1\|636228_637233_+\|integrase	tyrosine-type recombinase/integrase	A0A141DZS4	Streptococcus_phage	1.9e-09	26.9
WP_026748238.1\|637238_637658_+	hypothetical protein	NA	NA	NA	NA
WP_026748239.1\|637848_638448_+	DUF1694 domain-containing protein	NA	NA	NA	NA
WP_146998215.1\|638440_639709_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_146998216.1\|639919_641068_+	lactaldehyde reductase	NA	NA	NA	NA
WP_146998217.1\|641496_642225_-	methyltransferase	NA	NA	NA	NA
WP_026748243.1\|642341_643061_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_146998218.1\|643305_644190_+	fructose bisphosphate aldolase	NA	NA	NA	NA
WP_146999370.1\|644972_649370_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	1.5e-29	38.2
WP_146998219.1\|650377_652048_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_146998220.1\|652087_652582_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_146998221.1\|652607_653828_+	putative C-S lyase	NA	NA	NA	NA
WP_146999371.1\|654013_655663_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_146998222.1\|655698_657477_+	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_026748633.1\|657650_658370_+	queuosine precursor transporter	NA	NA	NA	NA
WP_146998223.1\|658385_659090_+	radical SAM protein	NA	NA	NA	NA
WP_146998224.1\|659291_659672_-	hypothetical protein	NA	NA	NA	NA
WP_146998225.1\|660436_661729_-	outer membrane protein transport protein	NA	NA	NA	NA
WP_146999372.1\|662180_663332_+	divalent metal cation transporter	NA	NA	NA	NA
WP_146999373.1\|663367_664099_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
WP_146998226.1\|664098_665103_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
WP_026748640.1\|665208_665625_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_146998227.1\|665885_670484_+	translocation/assembly module TamB domain-containing protein	NA	NA	NA	NA
WP_146996136.1\|670492_672823_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA
WP_146998228.1\|672920_673922_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_146998229.1\|674051_674696_+	DUF4878 domain-containing protein	NA	NA	NA	NA
WP_036095338.1\|674870_675050_+	hypothetical protein	NA	NA	NA	NA
WP_146998230.1\|675027_675387_+	hypothetical protein	NA	NA	NA	NA
WP_146998231.1\|675459_676224_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_146998232.1\|677436_677733_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_146998233.1\|677732_678716_+	permease	NA	NA	NA	NA
WP_146998234.1\|678761_679127_+	TM0996/MTH895 family glutaredoxin-like protein	NA	NA	NA	NA
WP_172618374.1\|679123_679519_+	arsenate reductase ArsC	NA	NA	NA	NA
WP_172618301.1\|679588_680077_+	hypothetical protein	NA	NA	NA	NA
WP_146999374.1\|680435_681374_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_146998237.1\|681459_682386_+	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_015769976.1\|682444_682924_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_146996144.1\|682975_683686_+	hypothetical protein	NA	NA	NA	NA
WP_172618302.1\|683723_684164_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_146997751.1\|684160_684253_+	hypothetical protein	NA	NA	NA	NA
WP_146998238.1\|685616_687584_+	hypothetical protein	NA	NA	NA	NA
WP_146998239.1\|687710_688889_-\|transposase	IS110 family transposase	NA	NA	NA	NA
691378:691396	attR	NA	NA	NA	NA

DBSCAN-SWA_4

775390 : 892129

Streptococcus_phage(30.0%)

integrase,tRNA,transposase

attL 768330:768348|attR 869314:869332

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
768330:768348	attL	NA	NA	NA	NA
WP_146998290.1\|775390_776365_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	2.2e-34	28.7
WP_146999377.1\|776396_776969_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_146998291.1\|777177_778401_+	DUF4143 domain-containing protein	NA	NA	NA	NA
WP_146998292.1\|778444_781813_+	DEAD/DEAH box helicase family protein	A0A097BY72	Enterococcus_phage	4.0e-19	26.3
WP_146996254.1\|781931_782600_+	sakacin A production response regulator	NA	NA	NA	NA
WP_172618309.1\|782612_784310_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_146998294.1\|784322_785585_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_146998295.1\|785621_787436_+	Hsp70 family protein	A0A1V0SH73	Hokovirus	1.1e-74	33.2
WP_146998296.1\|787522_788596_+	DKNYY domain-containing protein	NA	NA	NA	NA
WP_146998297.1\|788663_791936_+	DKNYY domain-containing protein	NA	NA	NA	NA
WP_146998298.1\|791996_793802_+	DKNYY domain-containing protein	NA	NA	NA	NA
WP_146998299.1\|795937_796411_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_146998300.1\|796367_796640_+	hypothetical protein	NA	NA	NA	NA
WP_084533572.1\|796606_796957_+	amidohydrolase family protein	NA	NA	NA	NA
WP_146998301.1\|796973_797720_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_146998302.1\|797756_798638_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_146998303.1\|798621_799266_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_146998304.1\|800402_802247_+	DKNYY domain-containing protein	NA	NA	NA	NA
WP_146998305.1\|802518_803217_-	esterase	NA	NA	NA	NA
WP_146998306.1\|803583_804357_+	RNA polymerase subunit sigma	NA	NA	NA	NA
WP_146996268.1\|804837_805755_+	DUF4299 family protein	NA	NA	NA	NA
WP_146998307.1\|805774_806710_+	hypothetical protein	NA	NA	NA	NA
WP_146998308.1\|806728_807493_+	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_146998309.1\|807512_808607_+	ABC transporter permease	NA	NA	NA	NA
WP_146996272.1\|808647_809022_+	hypothetical protein	NA	NA	NA	NA
WP_146998310.1\|809111_809513_+	hypothetical protein	NA	NA	NA	NA
WP_172618310.1\|809675_809846_-	hypothetical protein	NA	NA	NA	NA
WP_172618362.1\|809873_810293_-\|transposase	transposase	NA	NA	NA	NA
WP_172618293.1\|810314_810467_+	hypothetical protein	NA	NA	NA	NA
WP_146998084.1\|810444_810840_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618311.1\|810928_811279_+	hypothetical protein	NA	NA	NA	NA
WP_146996274.1\|811493_812708_+	amidohydrolase	NA	NA	NA	NA
WP_146998312.1\|812721_814410_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	E4ZFI6	Streptococcus_phage	9.6e-62	32.8
WP_009644182.1\|814428_814710_+	hypothetical protein	NA	NA	NA	NA
WP_172618312.1\|814905_815583_-\|transposase	transposase	NA	NA	NA	NA
WP_172618313.1\|815579_816128_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_146996276.1\|816205_816499_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_000863833.1\|816520_816736_+	conjugative transfer protein	NA	NA	NA	NA
WP_146998313.1\|816755_817619_+	hypothetical protein	NA	NA	NA	NA
WP_146998314.1\|817636_817900_+	conjugal transfer protein	NA	NA	NA	NA
WP_146998315.1\|817903_818293_+	PrgI family protein	E4ZFJ8	Streptococcus_phage	9.0e-48	81.7
WP_146998316.1\|822906_823320_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_146998317.1\|823316_824066_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_146999378.1\|824188_824521_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_172618269.1\|824805_824952_+	hypothetical protein	NA	NA	NA	NA
WP_146998318.1\|825101_826280_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_146998319.1\|826519_827185_+	DUF4366 domain-containing protein	NA	NA	NA	NA
WP_009643971.1\|829060_829240_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_146999379.1\|829257_830685_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_146998320.1\|838761_840231_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.7e-127	49.3
WP_146996288.1\|841755_842415_+	DNA-binding protein	NA	NA	NA	NA
WP_146998321.1\|842525_842735_+	helix-turn-helix domain-containing protein	A0A2K5B263	Erysipelothrix_phage	3.3e-12	44.9
WP_146996289.1\|842731_844192_+	SIR2 family protein	NA	NA	NA	NA
WP_146996290.1\|844193_844685_+	TIR domain-containing protein	NA	NA	NA	NA
WP_146996291.1\|844722_845325_+	TIR domain-containing protein	NA	NA	NA	NA
WP_146996292.1\|845299_846430_+	TIR domain-containing protein	NA	NA	NA	NA
WP_146998322.1\|846464_847781_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_009644452.1\|847799_848150_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_146998323.1\|848514_849039_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_146998324.1\|849455_849920_+	hypothetical protein	NA	NA	NA	NA
WP_172618279.1\|850471_850702_-	hypothetical protein	NA	NA	NA	NA
WP_172618314.1\|850668_851022_-\|transposase	transposase	NA	NA	NA	NA
WP_146998325.1\|851090_851636_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618279.1\|851889_852120_-	hypothetical protein	NA	NA	NA	NA
WP_172618315.1\|852109_852520_-\|transposase	transposase	NA	NA	NA	NA
WP_172618293.1\|852537_852690_+	hypothetical protein	NA	NA	NA	NA
WP_146998084.1\|852667_853063_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_146998326.1\|854259_855018_+	hypothetical protein	NA	NA	NA	NA
WP_172618316.1\|857125_857584_+	hypothetical protein	NA	NA	NA	NA
WP_146998328.1\|857613_858087_+	DnaJ domain-containing protein	M1PHB4	Moumouvirus	3.3e-12	56.9
WP_146998329.1\|858998_860756_+	hypothetical protein	NA	NA	NA	NA
WP_172618317.1\|860765_861638_+	hypothetical protein	NA	NA	NA	NA
WP_146998331.1\|861624_862935_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_146998332.1\|862937_863798_+	hypothetical protein	NA	NA	NA	NA
WP_146998333.1\|863856_864324_+	hypothetical protein	NA	NA	NA	NA
WP_146998334.1\|864350_864671_+	hypothetical protein	NA	NA	NA	NA
WP_146998335.1\|864685_864937_+	hypothetical protein	NA	NA	NA	NA
WP_146998336.1\|864944_866609_+	hypothetical protein	NA	NA	NA	NA
WP_146998337.1\|866623_867445_+	hypothetical protein	NA	NA	NA	NA
WP_146998338.1\|867452_868397_+	hypothetical protein	NA	NA	NA	NA
WP_146999380.1\|868515_868764_+	hypothetical protein	NA	NA	NA	NA
WP_146998339.1\|868771_869719_+	tetratricopeptide repeat protein	NA	NA	NA	NA
869314:869332	attR	NA	NA	NA	NA
WP_146998340.1\|871294_872665_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_146998341.1\|872907_873801_+	hypothetical protein	NA	NA	NA	NA
WP_146998342.1\|875674_876385_+	hypothetical protein	NA	NA	NA	NA
WP_172618318.1\|876399_877989_+	DUF4280 domain-containing protein	NA	NA	NA	NA
WP_172618375.1\|878432_879467_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_146998345.1\|879453_880260_+	peptidoglycan DD-metalloendopeptidase family protein	G9BW84	Planktothrix_phage	5.7e-20	42.0
WP_146996313.1\|880716_881304_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_146996314.1\|881340_882144_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	5.1e-37	35.7
WP_146998346.1\|882389_883208_-	oligoendopeptidase	NA	NA	NA	NA
WP_146998347.1\|883400_884048_-	OmpA family protein	NA	NA	NA	NA
WP_172618319.1\|884834_885122_-	hypothetical protein	NA	NA	NA	NA
WP_146998349.1\|885114_885876_-	hypothetical protein	NA	NA	NA	NA
WP_146998350.1\|885888_887379_-	dynamin family protein	NA	NA	NA	NA
WP_146998351.1\|887668_890908_-	autotransporter domain-containing protein	NA	NA	NA	NA
WP_146998352.1\|891151_892129_+\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA

DBSCAN-SWA_5

1074503 : 1085304

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146998454.1\|1074503_1078310_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	5.0e-34	25.4
WP_146998455.1\|1078504_1079620_+	DUF3829 domain-containing protein	NA	NA	NA	NA
WP_146999390.1\|1079913_1080420_+	hypothetical protein	NA	NA	NA	NA
WP_146998456.1\|1080460_1080940_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	2.1e-30	46.8
WP_026749155.1\|1081061_1081778_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	1.5e-43	43.9
WP_036095637.1\|1081924_1083376_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.4e-53	33.7
WP_146998457.1\|1083385_1083673_+	YciI family protein	NA	NA	NA	NA
WP_146998458.1\|1083694_1084693_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FC27	Synechococcus_phage	1.5e-62	43.5
WP_146998459.1\|1084680_1085304_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.0e-21	35.4

DBSCAN-SWA_6

1381336 : 1427571

Cyanophage(25.0%)

protease,transposase,integrase

attL 1389751:1389767|attR 1427598:1427614

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172618380.1\|1381336_1381501_-\|transposase	transposase	NA	NA	NA	NA
WP_172618292.1\|1381534_1381762_-\|transposase	transposase	NA	NA	NA	NA
WP_172618340.1\|1381709_1382306_-\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_146998628.1\|1382988_1383837_+	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_146998629.1\|1384055_1384490_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_026747410.1\|1384644_1385421_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_146998630.1\|1385686_1386490_+	UDP-2,3-diacylglucosamine diphosphatase LpxI	NA	NA	NA	NA
WP_146996730.1\|1386795_1387998_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_146998631.1\|1388034_1389486_+	MATE family efflux transporter	NA	NA	NA	NA
WP_146998632.1\|1389521_1390145_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
1389751:1389767	attL	NA	NA	NA	NA
WP_146998633.1\|1390178_1391201_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_026747404.1\|1391235_1392057_+	RNA polymerase sigma factor RpoD/SigA	M4SMP8	Cyanophage	7.3e-23	27.6
WP_026747403.1\|1392072_1393200_+	DNA polymerase III subunit beta	NA	NA	NA	NA
WP_026747402.1\|1393238_1394177_+	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_026747401.1\|1394392_1394968_-	hypothetical protein	NA	NA	NA	NA
WP_146998634.1\|1395290_1396106_+	P-loop NTPase	NA	NA	NA	NA
WP_021769808.1\|1396170_1396848_+	response regulator transcription factor	NA	NA	NA	NA
WP_146998635.1\|1396999_1397635_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.0e-64	56.6
WP_026747398.1\|1397845_1398055_+	DUF1858 domain-containing protein	NA	NA	NA	NA
WP_026747397.1\|1398134_1398521_-	hypothetical protein	NA	NA	NA	NA
WP_146998636.1\|1398620_1399490_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_146998637.1\|1401333_1402092_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_146998638.1\|1402391_1403345_+	hypothetical protein	NA	NA	NA	NA
WP_146998639.1\|1403798_1404716_+	cell division protein MraZ	NA	NA	NA	NA
WP_172618341.1\|1404969_1405548_-	DUF5362 domain-containing protein	NA	NA	NA	NA
WP_146998640.1\|1405739_1407392_+	AAA family ATPase	NA	NA	NA	NA
WP_146998641.1\|1407505_1408141_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_146998642.1\|1408224_1409079_+	hypothetical protein	NA	NA	NA	NA
WP_146998643.1\|1409257_1409974_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_146998644.1\|1410043_1410799_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_021768669.1\|1410859_1411192_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_015769455.1\|1411181_1411439_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_146998645.1\|1411951_1412605_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA
WP_146998646.1\|1412635_1413058_+	hypothetical protein	NA	NA	NA	NA
WP_146998647.1\|1413100_1413952_+	histidinol-phosphatase HisJ	NA	NA	NA	NA
WP_146998648.1\|1413984_1414299_+	hypothetical protein	NA	NA	NA	NA
WP_146998649.1\|1414405_1415485_+	OmpA family protein	NA	NA	NA	NA
WP_146998650.1\|1416050_1417445_+	hypothetical protein	NA	NA	NA	NA
WP_146998651.1\|1417504_1418137_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_146998652.1\|1418170_1419682_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_146996779.1\|1419794_1420298_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_146998653.1\|1420506_1421508_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_026747365.1\|1421515_1422241_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.6e-08	25.4
WP_146998654.1\|1422265_1423780_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA
WP_026747363.1\|1423782_1424148_+	hypothetical protein	NA	NA	NA	NA
WP_146998655.1\|1424698_1425049_+	hypothetical protein	NA	NA	NA	NA
WP_146998656.1\|1425244_1426354_-\|integrase	tyrosine-type recombinase/integrase	Q8SBN2	Clostridium_phage	2.8e-62	37.9
WP_146998657.1\|1426473_1427571_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
1427598:1427614	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1628681 : 1683426

Bacillus_phage(50.0%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146998084.1\|1628681_1629077_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618293.1\|1629054_1629207_-	hypothetical protein	NA	NA	NA	NA
WP_172618292.1\|1629222_1629450_+\|transposase	transposase	NA	NA	NA	NA
WP_172618347.1\|1629385_1629625_+\|transposase	transposase	NA	NA	NA	NA
WP_172618279.1\|1629614_1629845_+	hypothetical protein	NA	NA	NA	NA
WP_146998775.1\|1630114_1630393_-	hypothetical protein	NA	NA	NA	NA
WP_146998776.1\|1630507_1630909_-	hypothetical protein	NA	NA	NA	NA
WP_146998777.1\|1630942_1631416_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_172618348.1\|1631482_1632031_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_146997037.1\|1632350_1632848_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y3R2	Acanthamoeba_polyphaga_mimivirus	8.6e-19	43.2
WP_026747927.1\|1633046_1633226_+	hypothetical protein	NA	NA	NA	NA
WP_026747926.1\|1633357_1633534_+	hypothetical protein	NA	NA	NA	NA
WP_026747925.1\|1633986_1634223_+	hypothetical protein	NA	NA	NA	NA
WP_084533546.1\|1634603_1634681_+	hypothetical protein	NA	NA	NA	NA
WP_172618383.1\|1634776_1635964_-	Sapep family Mn(2+)-dependent dipeptidase	NA	NA	NA	NA
WP_146998779.1\|1635989_1636955_-	isoaspartyl peptidase/L-asparaginase	NA	NA	NA	NA
WP_146998780.1\|1636982_1638062_-	M42 family metallopeptidase	NA	NA	NA	NA
WP_172618349.1\|1638067_1639084_-	hypothetical protein	NA	NA	NA	NA
WP_146998782.1\|1639191_1639713_-	glycine/betaine/sarcosine/D-proline family reductase selenoprotein B	NA	NA	NA	NA
WP_026747919.1\|1639877_1641227_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_026747918.1\|1641219_1641555_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_146998783.1\|1641648_1642545_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA
WP_146998784.1\|1642834_1644031_+	RepB family plasmid replication initiator protein	NA	NA	NA	NA
WP_146998785.1\|1644154_1645339_-	hypothetical protein	NA	NA	NA	NA
WP_026747915.1\|1645603_1646275_-	HAD family phosphatase	NA	NA	NA	NA
WP_146998786.1\|1646389_1648129_-	alpha-glucosidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_026747913.1\|1648525_1649848_-	6-phospho-alpha-glucosidase	NA	NA	NA	NA
WP_026747912.1\|1650076_1650784_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_026747911.1\|1650864_1652442_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_026747910.1\|1652659_1653451_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_146998787.1\|1653487_1654618_-	hypothetical protein	NA	NA	NA	NA
WP_026747908.1\|1654607_1655195_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_146998788.1\|1655412_1657173_-	hypothetical protein	NA	NA	NA	NA
WP_146998789.1\|1657294_1658947_-	Hsp70 family protein	A0A0N9QXN8	Chrysochromulina_ericina_virus	9.4e-70	33.3
WP_146998790.1\|1658950_1659547_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_026747904.1\|1659833_1660466_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_146999408.1\|1660521_1660965_-	DUF3290 family protein	NA	NA	NA	NA
WP_084533540.1\|1662040_1664350_+	U32 family peptidase	NA	NA	NA	NA
WP_146998791.1\|1664505_1665591_+	O-antigen ligase family protein	NA	NA	NA	NA
WP_146998792.1\|1665614_1666178_+	RNA methyltransferase	NA	NA	NA	NA
WP_146998793.1\|1666237_1666657_+	diguanylate cyclase	NA	NA	NA	NA
WP_146998794.1\|1666693_1667203_+	16S rRNA processing protein RimM	NA	NA	NA	NA
WP_146998795.1\|1667242_1668013_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_146998796.1\|1668238_1668844_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_146998797.1\|1668862_1669747_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_146998798.1\|1670045_1670942_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_146998799.1\|1671053_1672028_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_146997061.1\|1672303_1673248_+	ROK family glucokinase	NA	NA	NA	NA
WP_146998800.1\|1673323_1673674_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_026747885.1\|1673705_1673984_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_146998801.1\|1674364_1675732_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	7.3e-28	34.7
WP_026747883.1\|1675767_1676451_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.4e-33	34.4
WP_172618350.1\|1676494_1677223_-	UTRA domain-containing protein	NA	NA	NA	NA
WP_146998802.1\|1677314_1678646_-	citrate synthase	NA	NA	NA	NA
WP_026747880.1\|1678655_1679657_-	isocitrate dehydrogenase	NA	NA	NA	NA
WP_146999409.1\|1679814_1681761_-	aconitate hydratase	NA	NA	NA	NA
WP_146998803.1\|1682425_1682998_+	biotin transporter BioY	NA	NA	NA	NA
WP_146998084.1\|1683030_1683426_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_8

1836135 : 1899757

Staphylococcus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_146998897.1\|1836135_1836549_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_146998898.1\|1836545_1837295_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_146998899.1\|1837437_1838781_+\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_146997179.1\|1838834_1839020_-	DNA cytosine methyltransferase	A0A141E0F9	Streptococcus_phage	4.4e-05	50.0
WP_146998900.1\|1839036_1840680_-	hypothetical protein	NA	NA	NA	NA
WP_146998901.1\|1840835_1842071_-	aminoacetone oxidase family FAD-binding enzyme	A0A2H4PQX1	Staphylococcus_phage	8.4e-07	31.3
WP_146998902.1\|1842417_1843176_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_146998903.1\|1843326_1843971_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_146998904.1\|1844425_1845469_-	type II secretion system F family protein	NA	NA	NA	NA
WP_169720569.1\|1845524_1846406_-	ROK family protein	NA	NA	NA	NA
WP_146998905.1\|1846488_1847490_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	R9S8D5	Prochlorococcus_phage	1.6e-16	29.4
WP_146998906.1\|1847654_1848839_-	general secretion pathway protein GspD	NA	NA	NA	NA
WP_146998907.1\|1848868_1849435_-	hypothetical protein	NA	NA	NA	NA
WP_146998908.1\|1849533_1850943_-	hypothetical protein	NA	NA	NA	NA
WP_146999414.1\|1850996_1851596_-	hypothetical protein	NA	NA	NA	NA
WP_146998909.1\|1851612_1852071_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_146998910.1\|1852097_1852556_-	hypothetical protein	NA	NA	NA	NA
WP_146998911.1\|1852570_1853017_-	prepilin peptidase	NA	NA	NA	NA
WP_172618386.1\|1853016_1853424_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_146998913.1\|1853826_1854048_-	hypothetical protein	NA	NA	NA	NA
WP_146998914.1\|1854233_1855145_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_146998915.1\|1855310_1855676_-	hypothetical protein	NA	NA	NA	NA
WP_146998916.1\|1855808_1856786_-	beta-ketoacyl-ACP synthase 3	NA	NA	NA	NA
WP_026748392.1\|1856974_1857166_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_146998917.1\|1857386_1858685_-	TIGR00341 family protein	NA	NA	NA	NA
WP_146998918.1\|1858748_1859996_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_146998919.1\|1860421_1863775_-	SNF2 helicase associated domain-containing protein	Q91GL2	Epiphyas_postvittana_nucleopolyhedrovirus	8.9e-43	28.2
WP_146998920.1\|1863907_1864429_-	DUF1439 domain-containing protein	NA	NA	NA	NA
WP_146998921.1\|1864576_1867405_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	4.2e-280	53.8
WP_146998922.1\|1868248_1869004_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_026748399.1\|1869032_1869902_-	ABC transporter permease	NA	NA	NA	NA
WP_026748400.1\|1869948_1871016_-	ABC transporter permease	NA	NA	NA	NA
WP_146998923.1\|1871008_1872526_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	8.7e-22	32.7
WP_146998924.1\|1872683_1873700_-	hypothetical protein	NA	NA	NA	NA
WP_146998925.1\|1873860_1875645_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_146997777.1\|1875654_1876536_-	RNase adapter RapZ	NA	NA	NA	NA
WP_146998926.1\|1876838_1877354_+	hypothetical protein	NA	NA	NA	NA
WP_146998927.1\|1877508_1879059_-	hypothetical protein	NA	NA	NA	NA
WP_146998928.1\|1879444_1880488_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	4.9e-24	23.5
WP_146998929.1\|1880765_1881263_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_146998930.1\|1881346_1881946_-	hypothetical protein	NA	NA	NA	NA
WP_146998931.1\|1881987_1884621_-	autotransporter domain-containing protein	NA	NA	NA	NA
WP_146997208.1\|1885053_1886400_+	magnesium transporter	NA	NA	NA	NA
WP_026748412.1\|1886410_1887757_+	magnesium transporter	NA	NA	NA	NA
WP_026748413.1\|1887832_1888363_+	hypothetical protein	NA	NA	NA	NA
WP_146998932.1\|1888590_1897026_-	autotransporter-associated N-terminal domain-containing protein	NA	NA	NA	NA
WP_146998933.1\|1897392_1898376_-	FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	6.4e-42	34.4
WP_146998084.1\|1898814_1899210_+\|transposase	transposase zinc-binding domain-containing protein	NA	NA	NA	NA
WP_172618387.1\|1899216_1899582_+\|transposase	transposase	NA	NA	NA	NA
WP_172618347.1\|1899517_1899757_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_AP019845.1|WP_146998694.1|1486923_1487508_-|GNAT-family-N-acetyltransferase

Click the colored protein region to show detailed information

Acr_ID: NZ_AP019845.1|WP_146998696.1|1487840_1488419_-|GNAT-family-N-acetyltransferase

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_AP019845.1|WP_146998694.1|1486923_1487508_-|GNAT-family-N-acetyltransferase

1486923_1487508_-

194 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.7061855670103093	1	1.0

NZ_AP019845.1|WP_146998696.1|1487840_1488419_-|GNAT-family-N-acetyltransferase

1487840_1488419_-

192 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|89	0.4639175257731959	0.9947916666666666	0.9948186528497409

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019845

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information