CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP042616	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-1, complete sequence	0 crisprs	NA	0	1
NZ_CP042626	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-11, complete sequence	0 crisprs	NA	0	0
NZ_CP042625	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-10, complete sequence	0 crisprs	NA	0	0
NZ_CP042624	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-9, complete sequence	0 crisprs	NA	0	0
NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	1 crisprs	NA	1	4
NZ_CP042623	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-8, complete sequence	0 crisprs	NA	0	0
NZ_CP042619	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-4, complete sequence	0 crisprs	DEDDh	0	8
NZ_CP042620	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-5, complete sequence	0 crisprs	NA	0	2
NZ_CP042618	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-3_MCR3, complete sequence	0 crisprs	NA	0	1
NZ_CP042621	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-6, complete sequence	0 crisprs	NA	0	0
NZ_CP042622	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-7, complete sequence	1 crisprs	NA	1	1
NZ_CP042615	Escherichia coli strain NCYU-26-73 chromosome, complete genome	5 crisprs	DEDDh,DinG,csa3,cas3,cas8e,cas7,cas5,cas6e,cas1	10	6

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

169714 : 232227

Escherichia_phage(41.67%)

protease,transposase,integrase

attL 163094:163108|attR 219920:219934

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
163094:163108	attL	NA	NA	NA	NA
WP_047745010.1\|169714_170890_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001285422.1\|171060_171273_+	hypothetical protein	NA	NA	NA	NA
WP_151295355.1\|171633_172716_+	hypothetical protein	NA	NA	NA	NA
WP_151295328.1\|172881_174381_-	kinase	NA	NA	NA	NA
WP_151295329.1\|174405_176043_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_151295330.1\|176042_177083_-	VWA domain-containing protein	NA	NA	NA	NA
WP_151295356.1\|177168_177807_-	VWA domain-containing protein	NA	NA	NA	NA
WP_024182867.1\|178469_179108_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|179572_180040_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000506889.1\|180057_181266_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_151295331.1\|181276_182233_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_151295332.1\|182232_183312_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	8.9e-37	33.5
WP_151295333.1\|183313_184087_-	hypothetical protein	NA	NA	NA	NA
WP_151295334.1\|184079_185222_-	adenine/guanine phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	6.5e-30	34.5
WP_000254137.1\|186607_187189_+	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_032489711.1\|187319_188345_+	TerA	NA	NA	NA	NA
WP_000007449.1\|188367_188823_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_151295335.1\|188845_189886_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	6.5e-77	47.7
WP_000116680.1\|189934_190513_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
WP_000301247.1\|190581_191157_+	tellurium resistance protein TerE	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_000398479.1\|193611_193803_-	hypothetical protein	NA	NA	NA	NA
WP_000880375.1\|195214_195469_+	hypothetical protein	NA	NA	NA	NA
WP_000211824.1\|197508_198495_-	hypothetical protein	NA	NA	NA	NA
WP_012695443.1\|199786_200098_+	hypothetical protein	NA	NA	NA	NA
WP_123906519.1\|201161_201344_+	hypothetical protein	NA	NA	NA	NA
WP_000340139.1\|201324_201822_+	membrane protein	NA	NA	NA	NA
WP_012477377.1\|203612_203906_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000134171.1\|205296_205503_+	hypothetical protein	NA	NA	NA	NA
WP_151295336.1\|205603_206014_+	hypothetical protein	NA	NA	NA	NA
WP_000278471.1\|207095_207521_+	hypothetical protein	NA	NA	NA	NA
WP_151295337.1\|208069_208378_+	hypothetical protein	NA	NA	NA	NA
WP_001162012.1\|211623_212181_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_001083725.1\|213643_214141_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|214252_214543_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_000679427.1\|215504_215852_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001993321.1\|216616_216796_-	hypothetical protein	NA	NA	NA	NA
WP_151295338.1\|217284_218277_-	AAA family ATPase	NA	NA	NA	NA
WP_151295339.1\|218787_219471_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.3e-131	99.5
WP_001447541.1\|223736_224621_+	DUF3363 domain-containing protein	NA	NA	NA	NA
219920:219934	attR	NA	NA	NA	NA
WP_001255015.1\|226078_226384_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_021545039.1\|226745_227771_+\|transposase	IS21-like element ISEc57 family transposase	A0A2L1IVA1	Escherichia_phage	6.6e-74	44.1
WP_001053381.1\|227770_228544_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.5e-73	55.4
WP_151295340.1\|228618_229893_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000602738.1\|231474_232227_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP042617

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042617_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042617_1

25494-25613

Orphan

Consensus_repeat	Method
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042617_1

>merge|NZ_CP042617|1|25494-25613|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

>NZ_CP042617|1|1|25494-25613|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	GTGCGCAGCCATCCACCTTTCATGAAAATTACAG
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042617.1\|WP_151295363.1\|12672_13686_+\|class-1-integron-integrase-IntI1	unknown	unknown	gnl\|CDD\|185315
NZ_CP042617.1\|WP_000147567.1\|14364_14925_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239737
NZ_CP042617.1\|WP_151295365.1\|22451_23429_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_001050931.1\|24404_25241_-\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP042617.1\|WP_000220560.1\|26715_26997_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP042617.1\|WP_000084745.1\|30222_30615_+\|NimC/NimA-family-protein	unknown	unknown	gnl\|CDD\|227348
NZ_CP042617.1\|WP_001532157.1\|25179_25410_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_001189832.1\|34146_34983_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_151295366.1\|30745_31429_-\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP042617.1\|WP_001185482.1\|22145_22427_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_000456533.1\|23425_23782_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_151292568.1\|32528_33212_+\|IS6-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP042617.1\|WP_000565612.1\|20123_20207_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_071852594.1\|38308_38788_+\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|377845
NZ_CP042617.1\|WP_081316080.1\|13654_14239_+\|DUF3330-domain-containing-protein	unknown	unknown	gnl\|CDD\|288642
NZ_CP042617.1\|WP_000121743.1\|26474_26726_+\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484
NZ_CP042617.1\|WP_151295367.1\|35061_35496_+\|phage-tail-protein	unknown	unknown	unknown
NZ_CP042617.1\|WP_151295364.1\|21385_22048_+\|peptidyl-arginine-deiminase	unknown	unknown	gnl\|CDD\|222854
NZ_CP042617.1\|WP_000734776.1\|27808_28123_+\|IncN-plasmid-KikA-protein	unknown	unknown	gnl\|CDD\|237548
NZ_CP042617.1\|WP_001452736.1\|28158_28470_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376849

Protein	Function_ID	Function_description	E-value
NZ_CP042617.1\|WP_151295363.1\|12672_13686_+\|class-1-integron-integrase-IntI1	gnl\|CDD\|185315	PRK15417, PRK15417, integron integrase.	0
NZ_CP042617.1\|WP_001452736.1\|28158_28470_+\|hypothetical-protein	gnl\|CDD\|376849	pfam02601, Exonuc_VII_L, Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyzes exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.	0.00640889
NZ_CP042617.1\|WP_001050931.1\|24404_25241_-\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	8.48883e-22
NZ_CP042617.1\|WP_000220560.1\|26715_26997_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.35296e-20
NZ_CP042617.1\|WP_000084745.1\|30222_30615_+\|NimC/NimA-family-protein	gnl\|CDD\|227348	COG5015, COG5015, Uncharacterized conserved protein [Function unknown].	1.3551e-35
NZ_CP042617.1\|WP_151292568.1\|32528_33212_+\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.69853e-69
NZ_CP042617.1\|WP_151295366.1\|30745_31429_-\|IS6-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.55575e-67
NZ_CP042617.1\|WP_000147567.1\|14364_14925_+\|recombinase-family-protein	gnl\|CDD\|239737	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some putative integrases including a sequence from bacteriophage phi-FC1.	2.45308e-51
NZ_CP042617.1\|WP_071852594.1\|38308_38788_+\|tail-fiber-protein	gnl\|CDD\|377845	pfam07484, Collar, Phage Tail Collar Domain. This region is occasionally found in conjunction with pfam03335. Most of the family appear to be phage tail proteins; however some appear to be involved in other processes. For instance a member from Rhizobium leguminosarum may be involved in plant-microbe interactions. A related protein MrpB is involved in the pathogenicity of Microcystis aeruginosa. The finding of this family in a structural component of the phage tail fibre baseplate suggests that its function is structural rather than enzymatic. Structural studies show this region consists of a helix and a loop and three beta-strands. This alignment does not catch the third strand as it is separated from the rest of the structure by around 100 residues. This strand is conserved in homologs but the intervening sequence is not. Much of the function of phage T4 appears to reside in this intervening region. In the tertiary structure of the phage baseplate this domain forms part of the 'collar'. The domain may bind SO4, however the residues accredited with this vary between the PDB file and the Swiss-Prot entry. The long unconserved region maybe due to domain swapping in and out of a loop or reflective of rapid evolution.	6.31787e-14
NZ_CP042617.1\|WP_081316080.1\|13654_14239_+\|DUF3330-domain-containing-protein	gnl\|CDD\|288642	pfam11809, DUF3330, Domain of unknown function (DUF3330). This family of proteins are functionally uncharacterized. This family is only found in bacteria.	1.30543e-29
NZ_CP042617.1\|WP_000121743.1\|26474_26726_+\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08
NZ_CP042617.1\|WP_151295364.1\|21385_22048_+\|peptidyl-arginine-deiminase	gnl\|CDD\|222854	PHA02518, PHA02518, ParA-like protein; Provisional.	4.49483e-18
NZ_CP042617.1\|WP_000734776.1\|27808_28123_+\|IncN-plasmid-KikA-protein	gnl\|CDD\|237548	PRK13893, PRK13893, conjugal transfer protein TrbM; Provisional.	3.28045e-06

>NZ_CP042617.1|WP_001532157.1|25179_25410_+|hypothetical-protein
MLLISFLWRIFVFFVTLSKFIHYLWFLSSDGEIITTKAEICKVVYPPYVFPPKHGSHERIFIIYIQYDRNAQVSTF
>NZ_CP042617.1|WP_001050931.1|24404_25241_-|replication-initiation-protein
MNLLSVTKKTKIRHRNEINSTFSSLPLSARRILFMAMAQIDSREELSEGATFRITAREYAFIADIDVTGAYRQLKEGAEELQASVIRIPRNQLLTPQGNQSSGHTKKRGKLPSDAVRLMNLTAFCDYVESEGYIDIAFSHVIEPYITMLKDSYTTQVLISSVRLADQNSNMLYQFIRKQYSSGKKTFFDIEVDVLKDELELFRIDNGEKVYLYQNFKDFNKVFLQKNIEKINQYTEINHLEVKIVERVARRASKLRFSYKIDKESEGLDIRIPYGFRG
>NZ_CP042617.1|WP_000456533.1|23425_23782_-|hypothetical-protein
MEYQVREFINEKYTKAVNILKDNLKENYHVFYGVRLIEILFPASEYGTDAFFKEFELINSVILPLVIFDLTQRKPMMIISFDKILDASLLEGTNIVVLECITLADLLTNDNIDFLYKS
>NZ_CP042617.1|WP_151295365.1|22451_23429_+|hypothetical-protein
MRYLTELICDLYRLTDHHKLTTATFKNLADIKLFKPTADADTILQLENIFSEYSLRYIDKDLAEILSNLITTDKKHSLDFDFNKIQSLTDSKSFGCGWSKVINGSWFKDLYSWGEGMYPAENLKAENILDWKDNIWHIEHEGFPHAPPINVKYYSWFDRYVASNSGGSHHAAMVVYQSVRDGLEYKREAVIKQLSIDPGTVEILDKNYYSFIFQIKTLNKETRIYTSEYEFTDALKDFGQNRHTILKPVNYVSNIKLVFIPKDALKTNSETFRNWFHSAISCGKIISLPDYLKNPAHYHTLHYSHEVDSITLGDPSRKFKLKGDS
>NZ_CP042617.1|WP_001185482.1|22145_22427_+|hypothetical-protein
MALKLNRPNIDESQQPATNAETARFISGATRAPVVGKPKLMNFRLSAHFEDILEAEAIRTGQSKTTVLKAALAMYNSQDENIKNHWLLESAKF
>NZ_CP042617.1|WP_151295364.1|21385_22048_+|peptidyl-arginine-deiminase
MGKILLVVSDKGGVGKSTYVANTGSMLVNKGKSVIILKTDKNHDLLSWNEKRTDNGLLTIPVHAAYGNVSNEIKRLSKLCEVLIVDCPGHDSREFRSALTVSDIVVTLVKPSSDFESETLTSVTEKIRTAQKANAATEPWVLFTRINSAKPRHRKAAIDLDKLLRSDNIWIQPLKTRISELDVYESACNEGAGVHDVSRASSLSTAKAQIELVAQEIGIL
>NZ_CP042617.1|WP_000565612.1|20123_20207_+|hypothetical-protein
MIDKAIIVLGALISLLELIRYLLQLMG
>NZ_CP042617.1|WP_000147567.1|14364_14925_+|recombinase-family-protein
MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGKDVKRPQLEALISFARTGDTVVVHSMDRLARNLDDLRRIVQTLTQRGVHIEFVKEHLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGEQKTKLAREFGISRETLYQYLRTDQ
>NZ_CP042617.1|WP_081316080.1|13654_14239_+|DUF3330-domain-containing-protein
MRCRPSLVRGRAAQVNPGGFTTPARRPSVPHRTAGCGKSSLRPLMAGSSPSLPDGSNPSAAIVQSASDVQCSRLLKTTMEVVAEGVETPDCLAWLRQAGCDTVQGFLFARPMPAAAFVGFVNQWRNTTMNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDACDSPPPG
>NZ_CP042617.1|WP_151295363.1|12672_13686_+|class-1-integron-integrase-IntI1
MKTATAPLPPLRSVKVLDQLRERIRYLHYSLPTEQAYVHWVRAFIRFHGVRHPATLGSSEVEAFLSWLANERKVSVSTHRQALAALLFFYGKVLCTDLPRLQEIGRPRPSRRLPVVLTPDEVVRILGFLEGEHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKDRALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSRPWFWVFAQHTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQDLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER
>NZ_CP042617.1|WP_000121743.1|26474_26726_+|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>NZ_CP042617.1|WP_000220560.1|26715_26997_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADLR
>NZ_CP042617.1|WP_000734776.1|27808_28123_+|IncN-plasmid-KikA-protein
MKKLLIPLIAAGSLLYLPASHAEDPCKVIMCMAGKLTGDSGGSECNSAEAAFFNIVKKNKHGFLPNHTKDARKAFLNECPDNGEGGSNQSMISQIISKYGKVRL
>NZ_CP042617.1|WP_001452736.1|28158_28470_+|hypothetical-protein
MKKIILSALACTALLTGCVSQDKGNAMQSQLNNQQRQINELSVRLQSAESRLSKQEEKLRNELLQSSGYCYLNGARYSTGTVLYGRICQNQSGSASWQVYSRR
>NZ_CP042617.1|WP_000084745.1|30222_30615_+|NimC/NimA-family-protein
MSQVVDFLNEAKTFYFATVEGDQPRVRPFNAAMERNGKVYLGTTNQKKVYQQLLANSKVEVSGMAKGKWIRLTGEAVIDDTVEAREAMLEANPPLRDWYSADDGKFTVFYLKNMQAVLYSFTGDPEILDN
>NZ_CP042617.1|WP_151295366.1|30745_31429_-|IS6-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVTECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGRASAFYYGDPRAKCAW
>NZ_CP042617.1|WP_151292568.1|32528_33212_+|IS6-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPRAKCAW
>NZ_CP042617.1|WP_001189832.1|34146_34983_+|hypothetical-protein
MQRSWFNNRLTSAKQKSLLYKSLADLVQSMMDTFVDPWLERITNRKSIFSMSKEDLETRTNELGQFFTIRTSNSSSVPMLLQQRFDEIHFKGTERPINQTIYREFNGISVLWDPIYAPVDFERHPYGTVLIPESTLETTGGTFGEMFLTSRGMISIPINDLARTMGITGTIDQSAITEEILRKFNQFVKPLLPLHIVFDGLTLYLSVVVNEQADMITLNEISDTEKAFCWFETSDTTSLTEVTSINAPITATPGGTIVKATPTFDRTRADDLLLDSDA
>NZ_CP042617.1|WP_151295367.1|35061_35496_+|phage-tail-protein
MSDVSTNLYKSQLLDYYYQRRAESSINKGSRFLISKAVFGTSSLVTKKGDGTYEIGELPKAFDLAELTSQFCTINLVPTYSGGIITVRMDLDQSQLQEGKNYPFNTLVVLDNENKPIAIICVREDSLYVGKTYTAVMAINSTTA
>NZ_CP042617.1|WP_071852594.1|38308_38788_+|tail-fiber-protein
MPVGVPIPWPSATPPTGWLKCNGAAFSSEKYPNLAKVYPTLKLPDLRGEFIRGWDDGRGIDSGRSILSEQGYATEDHAHGLPSKSTVATDRSINFYFDEAWATSGNTGVIRWGNTSDAGLPAPNYGTFKTYKQSVANLGTAGLETRPRNIAFNYIVRAD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NZ_CP042617_1	1.1\|25537\|34\|NZ_CP042617\|CRISPRCasFinder	25537-25570	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

2. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

3. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

4. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

5. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

6. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

7. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

8. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

9. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

10. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

11. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

12. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

13. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

14. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

15. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

16. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

17. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

18. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

19. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

20. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

21. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

22. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

23. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

24. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

25. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

26. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

27. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

28. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

29. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

30. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

31. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

32. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

33. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

34. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

35. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

36. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

37. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

38. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

39. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

40. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

41. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

42. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

43. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

44. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

45. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

46. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

47. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

48. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

49. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

50. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

51. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

52. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

53. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

54. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

55. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

56. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

57. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

58. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

59. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

60. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

61. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

62. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

63. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

64. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

65. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

66. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

67. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

68. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

69. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

70. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

71. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

72. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

73. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

74. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

75. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

76. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

77. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

78. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

79. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

80. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

81. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

82. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

83. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

84. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

85. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

86. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

87. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

88. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

89. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

90. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

91. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

92. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

93. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

94. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

95. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

96. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

97. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

98. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

99. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

100. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

101. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

102. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

103. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

104. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

105. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

106. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

107. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

108. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

109. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

110. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

111. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

112. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

113. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

114. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

115. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

116. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

117. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

118. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

119. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

120. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

121. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

122. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

123. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

124. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

125. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

126. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

127. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

128. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

129. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

130. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

131. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

132. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

133. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

134. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

135. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

136. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

137. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

138. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

139. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

140. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

141. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

142. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

143. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

144. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

145. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

146. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

147. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

148. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

149. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

150. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

151. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

152. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

153. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

154. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

155. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

156. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

157. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

158. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

159. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

160. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

161. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

162. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

163. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

164. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

165. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

166. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

167. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaatcacag	Protospacer
*****************************.****

168. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

169. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

170. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

171. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

172. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

173. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

174. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

175. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

176. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

177. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

178. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

179. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

180. spacer 1.1|25537|34|NZ_CP042617|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
tcgaacagccatccacctttcatgaaaattacag	Protospacer
 .* .*****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

47 : 56294

Escherichia_phage(42.42%)

holin,head,portal,tail,integrase,transposase

attL 8:67|attR 31607:31780

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
8:67	attL	NA	NA	NA	NA
WP_151295360.1\|47_1262_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	3.6e-34	42.5
WP_001288435.1\|1295_2729_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.4e-106	50.9
WP_151295361.1\|3176_3860_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.6e-132	100.0
WP_011264039.1\|3952_4192_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_151292569.1\|4337_5201_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001354008.1\|5238_5484_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|5952_6744_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_104772209.1\|7598_7862_-	hypothetical protein	NA	NA	NA	NA
WP_000800531.1\|7923_8256_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_151295362.1\|9202_10570_-	CmlA family chloramphenicol efflux MFS transporter	S4TR35	Salmonella_phage	5.3e-26	31.7
WP_001206356.1\|10831_11623_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_001336345.1\|11628_11919_-	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_151292574.1\|12030_12528_-	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	4.1e-21	40.1
WP_151295363.1\|12672_13686_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.8e-71	45.5
WP_081316080.1\|13654_14239_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000147567.1\|14364_14925_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000565612.1\|20123_20207_+	hypothetical protein	NA	NA	NA	NA
WP_151295364.1\|21385_22048_+	peptidyl-arginine deiminase	E5FFJ3	Burkholderia_phage	1.3e-06	24.8
WP_001185482.1\|22145_22427_+	hypothetical protein	NA	NA	NA	NA
WP_151295365.1\|22451_23429_+	hypothetical protein	NA	NA	NA	NA
WP_000456533.1\|23425_23782_-	hypothetical protein	NA	NA	NA	NA
WP_001050931.1\|24404_25241_-	replication initiation protein	NA	NA	NA	NA
WP_001532157.1\|25179_25410_+	hypothetical protein	NA	NA	NA	NA
WP_000121743.1\|26474_26726_+	plasmid stabilization protein	NA	NA	NA	NA
WP_000220560.1\|26715_26997_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	3.8e-24	62.4
WP_000734776.1\|27808_28123_+	IncN plasmid KikA protein	NA	NA	NA	NA
WP_001452736.1\|28158_28470_+	hypothetical protein	NA	NA	NA	NA
WP_000084745.1\|30222_30615_+	NimC/NimA family protein	NA	NA	NA	NA
WP_151295366.1\|30745_31429_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.3e-130	98.6
WP_151292568.1\|32528_33212_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	3.0e-131	99.5
31607:31780	attR	NA	NA	NA	NA
WP_001189832.1\|34146_34983_+	hypothetical protein	A0A1B0V7F2	Salmonella_phage	1.4e-154	100.0
WP_151295367.1\|35061_35496_+\|tail	phage tail protein	A0A077SLL3	Escherichia_phage	1.6e-74	98.6
WP_071852594.1\|38308_38788_+\|tail	tail fiber protein	K7P7Q7	Enterobacteria_phage	3.2e-39	54.4
WP_000367945.1\|38793_39405_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	3.6e-83	78.6
WP_097331545.1\|39404_39845_-\|tail	tail fiber protein	A0A0F7LCR3	Escherichia_phage	4.6e-40	54.5
WP_001165547.1\|41389_41962_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.4e-83	85.0
WP_000145199.1\|42397_42661_+	hypothetical protein	Q71TD9	Escherichia_phage	1.1e-22	67.1
WP_000887652.1\|42735_43065_+\|holin	holin	Q37876	Escherichia_phage	1.3e-52	100.0
WP_000580776.1\|43061_43505_+	hypothetical protein	A0A077SK09	Escherichia_phage	1.3e-82	100.0
WP_001345482.1\|43491_44094_+	hypothetical protein	Q1MVM6	Enterobacteria_phage	5.4e-100	100.0
WP_151295368.1\|46014_46380_+	ddrA	Q1MVM8	Enterobacteria_phage	5.1e-45	98.3
WP_151295369.1\|46946_47345_-	hypothetical protein	Q71TE5	Escherichia_phage	4.7e-60	97.7
WP_151295370.1\|47322_47805_+	hypothetical protein	Q71TE6	Escherichia_phage	8.8e-53	76.7
WP_001165937.1\|49370_49679_+	hypothetical protein	Q1MVN0	Enterobacteria_phage	2.4e-48	94.1
WP_151295371.1\|52065_52554_-	single-stranded DNA-binding protein	A0A1B0VAF5	Salmonella_phage	1.6e-86	98.1
WP_151295395.1\|52723_53281_+	lysozyme	Q71TF3	Escherichia_phage	3.0e-105	98.9
WP_071833043.1\|53416_53569_+\|holin	antiholin	Q71TR5	Escherichia_phage	4.4e-19	88.0
WP_151295372.1\|53572_54592_-\|head	head processing protein	Q71TR6	Escherichia_phage	1.1e-182	98.5
WP_151295373.1\|54584_56294_-\|portal	phage portal protein	Q1MVN6	Enterobacteria_phage	0.0e+00	99.6

DBSCAN-SWA_2

63169 : 90048

Escherichia_phage(74.07%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000224043.1\|63169_63610_+	hypothetical protein	A0A077SLF0	Escherichia_phage	1.7e-79	100.0
WP_151295374.1\|63606_63855_+	modulator protein	Q71TG0	Escherichia_phage	4.0e-41	98.8
WP_074403646.1\|65258_65900_-	maturation control protein	A0A077SK30	Escherichia_phage	5.3e-114	98.6
WP_151295375.1\|66088_66649_-	recombinase	Q71TG3	Escherichia_phage	9.8e-96	95.7
WP_024245510.1\|66893_67205_-	hypothetical protein	Q5XLQ4	Enterobacteria_phage	6.3e-44	93.2
WP_000542336.1\|68293_68515_-	hypothetical protein	Q5QBN7	Enterobacteria_phage	4.5e-36	100.0
WP_001312283.1\|68926_69040_+	hypothetical protein	Q5XLQ7	Enterobacteria_phage	3.2e-14	100.0
WP_012817944.1\|69058_69154_+	hypothetical protein	Q38402	Escherichia_phage	2.8e-11	100.0
WP_032305379.1\|69119_69329_+	hypothetical protein	Q5XLQ8	Enterobacteria_phage	1.4e-31	98.6
WP_151295376.1\|69439_70291_+	hypothetical protein	A0A077SLM8	Escherichia_phage	1.5e-156	98.9
WP_151295377.1\|72823_72991_-	winged helix-turn-helix domain-containing protein	Q71T62	Escherichia_phage	2.2e-19	90.7
WP_001326849.1\|73076_73529_-	late promoter-activating protein	Q71T63	Escherichia_phage	3.0e-79	100.0
WP_000648833.1\|73617_74661_-	DUF968 domain-containing protein	A0A077SLM1	Escherichia_phage	1.1e-206	99.7
WP_151295378.1\|74688_74868_-	PdcA protein	A0A077SLR6	Escherichia_phage	2.7e-23	98.3
WP_151295379.1\|74872_75253_-	type II toxin-antitoxin system death-on-curing family toxin	A0A077SK56	Escherichia_phage	9.7e-63	98.4
WP_151295380.1\|75252_75474_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	4.3e-31	98.6
WP_151295396.1\|75656_77213_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	5.5e-104	42.7
WP_151295381.1\|78179_78371_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_096106393.1\|78492_81609_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	1.7e-27	24.0
WP_000021766.1\|81873_82380_-	hypothetical protein	A0A1B0VAK0	Salmonella_phage	4.8e-94	100.0
WP_000267620.1\|83717_83936_-	hypothetical protein	Q71TI9	Escherichia_phage	3.4e-36	100.0
WP_001354545.1\|84715_85393_-	calcineurin phosphoesterase	A0A077SLQ6	Escherichia_phage	7.6e-135	100.0
WP_000484110.1\|85389_86016_-	norphogenetic protein	Q71T82	Escherichia_phage	6.1e-123	100.0
WP_151295382.1\|85913_86576_-	norphogenetic protein	Q71T83	Escherichia_phage	4.7e-121	98.6
WP_000096174.1\|86517_86673_-	hypothetical protein	Q71TJ4	Escherichia_phage	7.0e-20	100.0
WP_151295383.1\|86739_87282_-	VRR-NUC domain-containing protein	Q71T85	Escherichia_phage	2.6e-93	96.6
WP_000235786.1\|87712_88090_+	hypothetical protein	Q38620	Escherichia_phage	2.2e-67	100.0
WP_151295384.1\|89319_90048_+\|tail	phage tail protein	A0A077SK19	Escherichia_phage	7.9e-138	99.6

DBSCAN-SWA_3

93507 : 96891

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001276603.1\|93507_94872_-	replicative DNA helicase	O80281	Escherichia_phage	1.6e-253	99.8
WP_151295385.1\|95345_95510_-	DUF3927 domain-containing protein	Q71T96	Escherichia_phage	1.7e-16	98.1
WP_151295386.1\|95509_95935_-	tellurite resistance TerB family protein	Q71TK7	Escherichia_phage	9.1e-70	98.6
WP_001068935.1\|96126_96318_+	hypothetical protein	Q71T98	Escherichia_phage	6.0e-29	100.0
WP_151295387.1\|96328_96562_-	hypothetical protein	A0A1B0VAL9	Salmonella_phage	2.4e-11	97.1
WP_024134673.1\|96705_96891_+	hypothetical protein	Q71T99	Escherichia_phage	1.5e-16	100.0

DBSCAN-SWA_4

107427 : 115168

Escherichia_phage(33.33%)

plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151295388.1\|107427_109134_+	hypothetical protein	Q71TM1	Escherichia_phage	0.0e+00	99.8
WP_029401366.1\|110793_111609_+	hypothetical protein	A0A1B0V835	Salmonella_phage	9.8e-113	98.9
WP_151295397.1\|111994_112225_+	hypothetical protein	Q1MVJ8	Enterobacteria_phage	2.0e-34	97.4
WP_151295389.1\|112236_112746_+\|plate	baseplate protein	Q1MVJ9	Enterobacteria_phage	3.9e-91	99.4
WP_001313475.1\|112862_113018_-	type I toxin-antitoxin system toxin HokD	A0A1I9LJU7	Stx_converting_phage	1.0e-15	92.2
WP_151295390.1\|113177_113444_-	hypothetical protein	A0A1B0VDM5	Salmonella_phage	1.7e-13	47.4
WP_000205060.1\|113493_113763_-	hypothetical protein	Q1MVK3	Enterobacteria_phage	2.4e-44	98.9
WP_151295391.1\|113759_114338_-	MarR family transcriptional regulator	Q71TB9	Escherichia_phage	1.2e-91	99.4
WP_001187876.1\|114367_115168_-	protein kilA	A0A077SL47	Escherichia_phage	1.4e-148	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP042618

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5464 : 62796

Escherichia_phage(31.25%)

transposase,integrase

attL 19035:19094|attR 26794:27451

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151085593.1\|5464_6169_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	7.6e-138	99.1
WP_021536379.1\|9549_10227_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_001351729.1\|12558_12951_-	cysteine hydrolase	NA	NA	NA	NA
WP_001352149.1\|16456_17206_+	molecular chaperone	NA	NA	NA	NA
WP_001269817.1\|17207_18272_+	fimbrial protein	NA	NA	NA	NA
WP_151295398.1\|18314_18515_-	cell surface composition regulator GlgS	NA	NA	NA	NA
19035:19094	attL	NA	NA	NA	NA
WP_151295393.1\|19097_19781_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	6.7e-131	99.1
WP_001288435.1\|21343_22777_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.4e-106	50.9
WP_151295399.1\|25025_26195_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	9.2e-72	45.5
WP_151295400.1\|26085_26790_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.4e-136	98.3
WP_151295401.1\|26780_27371_+	hypothetical protein	NA	NA	NA	NA
WP_000239529.1\|28359_28635_-	hypothetical protein	NA	NA	NA	NA
26794:27451	attR	NA	NA	NA	NA
WP_151295402.1\|28628_29273_-	chromosome partitioning protein ParA	A0A222YXS3	Escherichia_phage	7.4e-39	43.0
WP_001103690.1\|29503_30475_+	hypothetical protein	A0A222YXF2	Escherichia_phage	7.4e-67	42.9
WP_000340829.1\|30479_30872_+	hypothetical protein	NA	NA	NA	NA
WP_151295403.1\|30876_32148_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	7.1e-142	60.5
WP_151295404.1\|32147_32585_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.1e-25	48.4
WP_000618110.1\|32581_32830_-	protein ImpC	Q2A098	Sodalis_phage	1.9e-14	48.0
WP_032072581.1\|32940_33210_+	hypothetical protein	NA	NA	NA	NA
WP_151295427.1\|33247_34150_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_001104881.1\|35220_35442_+	hypothetical protein	NA	NA	NA	NA
WP_000274500.1\|35455_35890_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_077249901.1\|37247_37550_+	antirestriction protein	NA	NA	NA	NA
WP_000271744.1\|37596_38019_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_001027495.1\|38015_38207_+	hypothetical protein	NA	NA	NA	NA
WP_001367801.1\|38772_38979_+	hypothetical protein	NA	NA	NA	NA
WP_001276107.1\|38975_39503_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	3.5e-47	73.5
WP_151295405.1\|39560_39794_+	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	7.3e-05	51.1
WP_001145485.1\|39852_41811_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	7.3e-21	29.4
WP_000117626.1\|44069_44570_+	antirestriction protein	G9FHQ1	Rhodococcus_virus	7.1e-05	26.5
WP_024131422.1\|44708_45008_-	hypothetical protein	NA	NA	NA	NA
WP_001348083.1\|45029_45275_+	hypothetical protein	NA	NA	NA	NA
WP_000218858.1\|45297_45732_+	hypothetical protein	NA	NA	NA	NA
WP_000804663.1\|45824_46091_+	hypothetical protein	NA	NA	NA	NA
WP_000150314.1\|47616_47823_+	hypothetical protein	NA	NA	NA	NA
WP_151295406.1\|49623_49947_-\|transposase	transposase	NA	NA	NA	NA
WP_001283947.1\|50179_50512_+	IncI1-type relaxosome accessory protein NikA	NA	NA	NA	NA
WP_151295407.1\|55541_56015_-	DsbC family protein	NA	NA	NA	NA
WP_151295408.1\|56147_56612_-	hypothetical protein	NA	NA	NA	NA
WP_151295409.1\|56630_57839_-	IncI1-type conjugal transfer protein TrbA	NA	NA	NA	NA
WP_000118520.1\|59123_59441_+	quaternary ammonium compound-resistance protein SugE	NA	NA	NA	NA
WP_001221666.1\|59437_59971_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	6.1e-47	54.1
WP_000608644.1\|61533_62796_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP042619

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2054

Macacine_betaherpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066942.1\|1313_2054_-	site-specific recombinase	I3WFA4	Macacine_betaherpesvirus	2.0e-24	57.6

DBSCAN-SWA_2

17834 : 19307

Cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151295436.1\|17834_19307_+	ATP-binding cassette domain-containing protein	A0A285PWH2	Cedratvirus	2.0e-07	30.1

DBSCAN-SWA_3

31455 : 32566

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096251089.1\|31455_32566_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.1e-42	37.2

DBSCAN-SWA_4

37866 : 38894

Vibrio_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001423743.1\|37866_38523_+	enterotoxin	A0A023W6A1	Vibrio_virus	7.9e-105	81.7
WP_015675362.1\|38519_38894_+	heat-labile enterotoxin LT subunit B	D1GID8	Vibrio_virus	1.1e-50	79.8

DBSCAN-SWA_5

42198 : 42753

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151295463.1\|42198_42753_-	3'-5' exonuclease	K7RFY5	Vibrio_phage	1.4e-22	40.6

DBSCAN-SWA_6

67760 : 75715

Yersinia_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_140435897.1\|67760_68582_-	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	1.3e-43	37.8
WP_000547969.1\|69011_69218_-	hypothetical protein	NA	NA	NA	NA
WP_151295456.1\|69462_69660_-	hypothetical protein	NA	NA	NA	NA
WP_001302184.1\|69843_70002_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_151295457.1\|70276_70996_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_001603646.1\|71480_73439_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	8.6e-22	30.3
WP_151295458.1\|73792_74326_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	2.6e-45	73.9
WP_000547969.1\|74351_74558_-	hypothetical protein	NA	NA	NA	NA
WP_012775864.1\|75151_75715_-	class I SAM-dependent methyltransferase	A0A2I7RQ20	Vibrio_phage	2.6e-19	42.1

DBSCAN-SWA_7

81413 : 82097

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151295461.1\|81413_82097_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.9e-29	37.4

DBSCAN-SWA_8

90819 : 91982

Acinetobacter_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085947598.1\|90819_91982_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP042622

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042622_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042622_1

45851-45946

Orphan

Consensus_repeat	Method
TATAGATTTATATAATTATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042622_1

>merge|NZ_CP042622|1|45851-45946|CRISPRCasFinder
TATATGATTATAGATTTATATAATTATATAAAACGCTTTTCATCAGCCAAAAAGTTGGTTATGCTTACCTCGTTCTATAAATATAGATTTATAGAA

>NZ_CP042622|1|1|45851-45946|CRISPRCasFinder
TATATGATTATAGATTTATATAA	TTATATAAAACGCTTTTCATCAGCCAAAAAGTTGGTTATGCTTACCTCGT
TCTATAAATATAGATTTATAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042622.1\|WP_000100624.1\|43292_43526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042622.1\|WP_001523092.1\|43522_44038_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042622.1\|WP_151295538.1\|38053_38449_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP042622.1\|WP_001521425.1\|40221_40587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042622.1\|WP_000156167.1\|45977_46631_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP042622.1\|WP_151295539.1\|40943_42011_-\|DUF3560-domain-containing-protein	unknown	unknown	gnl\|CDD\|371890
NZ_CP042622.1\|WP_094316884.1\|39459_39996_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042622.1\|WP_001014473.1\|42888_43293_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374800
NZ_CP042622.1\|WP_134347180.1\|39248_39458_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042622.1\|WP_151295537.1\|37770_38067_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|368449
NZ_CP042622.1\|WP_001523091.1\|44034_44529_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042622.1\|WP_151295539.1\|40943_42011_-\|DUF3560-domain-containing-protein	gnl\|CDD\|371890	pfam12083, DUF3560, Domain of unknown function (DUF3560). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 120 amino acids in length. This domain has a conserved GHHSE sequence motif.	3.74532e-33
NZ_CP042622.1\|WP_001014473.1\|42888_43293_-\|hypothetical-protein	gnl\|CDD\|374800	pfam16786, RecA_dep_nuc, Recombination enhancement, RecA-dependent nuclease. REF is a family of P1-like phage RecA-dependent nucleases. It does not appear to act as a positive RecA regulator. It is a new kind of enzyme, a RecA-dependent nuclease.	1.19851e-08
NZ_CP042622.1\|WP_151295538.1\|38053_38449_-\|hypothetical-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	5.42767e-35
NZ_CP042622.1\|WP_151295537.1\|37770_38067_-\|phage-holin-family-protein	gnl\|CDD\|368449	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	2.01614e-20
NZ_CP042622.1\|WP_000156167.1\|45977_46631_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.44742e-15

>NZ_CP042622.1|WP_001523091.1|44034_44529_-|hypothetical-protein
MTFQEWVDENGGQIGVARKFGFTSSLIGAWYRFERFPRADNLTLLVAYSEGRINVQQWAADFAERQRQRSDGTSVRQNKIKGNLPVNCLSRLKAVFSELGMPAERCNLRGPRFIARWKHSHVTVSEVRDAITVLELKNKDSSDIELIHKEISNARRSALGRLEE
>NZ_CP042622.1|WP_001523092.1|43522_44038_-|hypothetical-protein
MMILAFFGDNHQIQSQVVHYLDQTIKGFVIDHIDNDSKRLSVEQKIGGVQRLVASRNRRDTVTVVTGITEVMEYQMLLHRGAVFCVLPGILPAILARGFVPIDESFLYVTPSRSLLDTEAKRRIYMMPDEAFSECYRREMRLGKREVSVVRDGRFLRSRTVKSTRNDGGHQ
>NZ_CP042622.1|WP_000100624.1|43292_43526_-|hypothetical-protein
MSSYVRGAAMHCQNPQFWRFLTSKTGKNVSNSSEASVILREFCGISSRKELAKNYAARSMYVQLINEFNLFINGKGR
>NZ_CP042622.1|WP_001014473.1|42888_43293_-|hypothetical-protein
MNGRTPTKKEKLYIQAVLTHVGCIACIIDGREIENPELWTELHHDPDYGSVDENCHFHSFGLCAPHHRGVVPGGGRVPPHIAVRHPPLSNCARFVERYGTDEFLCAQTWELLPQSVKDEIGFDLSLGEVPGDTK
>NZ_CP042622.1|WP_151295539.1|40943_42011_-|DUF3560-domain-containing-protein
MNKQVIISDWINNPNSLLSTDTGYLLRHVNGRMVKSDEHETFFFVEDDGRIYEDGYSYEAQTGCIPAELVDVTEDLRKAWLEQQQRGDDYVNTYQERQNARLARYIARAEKARKEGAVAHKRAHDLLDVIPLGQPILVDHYSAKGHRRRLSKADALFRKAFVECESKASHYESKAAGVGRNGISSDDPDALFKLLRKLQGCMKSHVKMKAANKAIRKYKKDQIQQLSALIDLRFTESEAKELLAGDFCGRIGFPSYALSNNNAEIKRLQSRIKELESVKSVTGAQREEYDGFSMEIDPEDNRILFYFPGKPEANIRSLLKSRAFKWSPTRNAWVRKITPNAPADARYLKESLLKA
>NZ_CP042622.1|WP_001521425.1|40221_40587_-|hypothetical-protein
MSIKTHTGIIITNDGEKKVKLRETPTTWCVGPKETYRKEDGRRCGAPLSRRRLLLSTIKPIGQVEQPTTPVTKISDKSLANLIADADKVLERNTPVADEEWWQDFRAAMLELQERRREELK
>NZ_CP042622.1|WP_094316884.1|39459_39996_-|hypothetical-protein
MSNQWRPDICPITGRAFFMWIEHPELGNVPTYGGPLDSYTIPTKDGDGEFSCERYDHDFGGWVESECLGLYLIDDKEQCRVYELEERVKELEAREIKPAKGEVLVVVSGFTGCGKSAIAGEIEIAMKAIGVPVQWTNGDAEKRMTGADWLTAIEMYKPTVRIVEVNVPRVDGIRIKGE
>NZ_CP042622.1|WP_134347180.1|39248_39458_-|hypothetical-protein
MAIAASYTMHLYCDCCQCTEGVYPVPDFGEYIGTSWSGCAKEARKDGWRISKDKTRAFAPGHKVLRINK
>NZ_CP042622.1|WP_151295538.1|38053_38449_-|hypothetical-protein
MSAEPISGTAVAAGGLMGASVFGIATGIDYGVVFGAFAGAVFYVATAVNISRLKLIGYFFTSFIVGVIGAPLVGSFLAKWTSYNDRPLDALGAVIVAALTIKILTFVNSRDLGSIFGMLSRLRGWGSNGKQ
>NZ_CP042622.1|WP_151295537.1|37770_38067_-|phage-holin-family-protein
MVSSDPSALINAVLCTVIVMALMLYRRKDSVHRPFVSFLAYIYVIVYANVPFRYVFGLYQESHWLVVIGNLIICIVVLYFRGNLARIVDALGFNHDQR
>NZ_CP042622.1|WP_000156167.1|45977_46631_+|ParA-family-protein
MTISVGIFNGKGGVTKSTIARALAVAYAKAGWNVCLIDMDVLNGTVTRWVQRRMANNIEPAIAAQPCGTPSQVQKIIESEVYDLVIVDGGAYASESVPKLSEFLDMVILPTRFSTDDLETTVNTAHGIVKKGVPIKKICMVFSGAAENEADYIEAQEYLANTPYFVVDKYIPHKPALSKAQDKGLSLIECSYVAPRKKADDVIQGIINQLEALTTAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP048340	Escherichia coli strain 142 plasmid p142_C, complete sequence	6214-6263	0	1.0
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	CP053252	Escherichia coli strain SCU-204 plasmid pSCU-204-5, complete sequence	22928-22977	0	1.0
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_LR130559	Escherichia coli strain MS14385 isolate MS14385 plasmid 5	38317-38366	0	1.0
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP042622	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-7, complete sequence	45874-45923	0	1.0
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP020497	Escherichia coli strain 103 plasmid unnamed2, complete sequence	41364-41413	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_LT985302	Escherichia coli strain ECOR 39 genome assembly, plasmid: RCS82_pI	15771-15820	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	AP019710	Escherichia coli O145:H28 122715 plasmid pO145_122715_2 DNA, complete genome	8553-8602	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP009861	Escherichia coli strain ECONIH1 plasmid pECO-b75, complete sequence	6459-6508	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP032259	Escherichia coli strain AR_0067 plasmid unnamed2, complete sequence	29357-29406	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP020518	Escherichia coli strain 222 plasmid unnamed2, complete sequence	9207-9256	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP024865	Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence	18879-18928	1	0.98
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP023368	Escherichia coli strain 1428 plasmid p48, complete sequence	8663-8712	2	0.96
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	CP025877	Escherichia coli strain 503458 plasmid p503458_49, complete sequence	13912-13961	3	0.94
NZ_CP042622_1	1.1\|45874\|50\|NZ_CP042622\|CRISPRCasFinder	45874-45923	50	NZ_CP037450	Escherichia coli strain ATCC 25922 plasmid unnamed, complete sequence	11300-11349	3	0.94

1. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP048340 (Escherichia coli strain 142 plasmid p142_C, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

2. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to CP053252 (Escherichia coli strain SCU-204 plasmid pSCU-204-5, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

3. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_LR130559 (Escherichia coli strain MS14385 isolate MS14385 plasmid 5) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

4. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP042622 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-7, complete sequence) position: , mismatch: 0, identity: 1.0

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	Protospacer
**************************************************

5. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP020497 (Escherichia coli strain 103 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

6. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_LT985302 (Escherichia coli strain ECOR 39 genome assembly, plasmid: RCS82_pI) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

7. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to AP019710 (Escherichia coli O145:H28 122715 plasmid pO145_122715_2 DNA, complete genome) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

8. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP009861 (Escherichia coli strain ECONIH1 plasmid pECO-b75, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

9. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP032259 (Escherichia coli strain AR_0067 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

10. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP020518 (Escherichia coli strain 222 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

11. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP024865 (Escherichia coli strain AR_0015 plasmid unitig_3_pilon, complete sequence) position: , mismatch: 1, identity: 0.98

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcgt	Protospacer
********************* ****************************

12. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP023368 (Escherichia coli strain 1428 plasmid p48, complete sequence) position: , mismatch: 2, identity: 0.96

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacgcttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
********************* **************************.*

13. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to CP025877 (Escherichia coli strain 503458 plasmid p503458_49, complete sequence) position: , mismatch: 3, identity: 0.94

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacacttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
***********.********* **************************.*

14. spacer 1.1|45874|50|NZ_CP042622|CRISPRCasFinder matches to NZ_CP037450 (Escherichia coli strain ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.94

ttatataaaacgcttttcatcagccaaaaagttggttatgcttacctcgt	CRISPR spacer
ttatataaaacacttttcatccgccaaaaagttggttatgcttacctcat	Protospacer
***********.********* **************************.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33952 : 40587

Escherichia_phage(62.5%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000412080.1\|33952_34363_-	hypothetical protein	Q8W634	Enterobacteria_phage	6.1e-39	78.6
WP_000636451.1\|34559_34772_-	hypothetical protein	NA	NA	NA	NA
WP_001141358.1\|34749_35049_-	hypothetical protein	NA	NA	NA	NA
WP_151295541.1\|35123_35321_-	hypothetical protein	NA	NA	NA	NA
WP_000867916.1\|35320_35590_-	hypothetical protein	NA	NA	NA	NA
WP_000147213.1\|36966_37245_-	hypothetical protein	G8C7W1	Escherichia_phage	4.0e-18	53.9
WP_024180651.1\|37241_37787_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	3.0e-89	84.0
WP_151295537.1\|37770_38067_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.3e-26	62.6
WP_151295538.1\|38053_38449_-	hypothetical protein	K7PHB9	Enterobacterial_phage	6.7e-51	80.8
WP_134347180.1\|39248_39458_-	hypothetical protein	A0A077SL56	Escherichia_phage	1.7e-32	91.3
WP_094316884.1\|39459_39996_-	hypothetical protein	A0A2I6TD51	Escherichia_phage	3.7e-52	97.9
WP_001521425.1\|40221_40587_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.1e-10	55.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

6. NZ_CP042615

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042615_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042615_1

951213-951336

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP042615_1

>merge|NZ_CP042615|1|951213-951336|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP042615|1|1|951213-951336|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042615.1\|WP_001000002.1\|947303_948269_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_001065741.1\|944286_944481_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000212657.1\|950771_951077_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP042615.1\|WP_001237796.1\|969528_969936_-\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|182358
NZ_CP042615.1\|WP_151293790.1\|944026_944290_-\|nicotinic-acetylcholine-receptor-subunit-beta	unknown	unknown	unknown
NZ_CP042615.1\|WP_151293789.1\|943213_943816_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000412541.1\|946554_946986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_001090782.1\|946985_947189_-\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|225848
NZ_CP042615.1\|WP_096251231.1\|972141_973038_+\|aldo/keto-reductase-family-oxidoreductase	unknown	unknown	gnl\|CDD\|227322
NZ_CP042615.1\|WP_151293794.1\|968778_969426_-\|ribonuclease-T	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|179951
NZ_CP042615.1\|WP_151293792.1\|962510_963338_-\|endopeptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP042615.1\|WP_000840481.1\|971853_972093_+\|DUF1289-domain-containing-protein	unknown	unknown	gnl\|CDD\|225850
NZ_CP042615.1\|WP_151293793.1\|963672_964020_+\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|182759
NZ_CP042615.1\|WP_000493947.1\|954536_955178_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP042615.1\|WP_000102278.1\|960233_960323_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP042615.1\|WP_151293791.1\|948364_949624_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271182
NZ_CP042615.1\|WP_000181940.1\|943808_944030_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238216
NZ_CP042615.1\|WP_000190982.1\|958909_959935_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP042615.1\|WP_000042978.1\|945535_945715_-\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
NZ_CP042615.1\|WP_001298528.1\|973119_973641_+\|superoxide-dismutase-[Cu-Zn]-SodC2	unknown	unknown	gnl\|CDD\|182357

Protein	Function_ID	Function_description	E-value
NZ_CP042615.1\|WP_000212657.1\|950771_951077_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP042615.1\|WP_001237796.1\|969528_969936_-\|lactoylglutathione-lyase	gnl\|CDD\|182358	PRK10291, PRK10291, glyoxalase I; Provisional.	2.99392e-86
NZ_CP042615.1\|WP_151293793.1\|963672_964020_+\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|182759	PRK10824, PRK10824, Grx4 family monothiol glutaredoxin.	3.90205e-85
NZ_CP042615.1\|WP_001090782.1\|946985_947189_-\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	4.30534e-10
NZ_CP042615.1\|WP_096251231.1\|972141_973038_+\|aldo/keto-reductase-family-oxidoreductase	gnl\|CDD\|227322	COG4989, COG4989, Predicted oxidoreductase [General function prediction only].	0
NZ_CP042615.1\|WP_151293794.1\|968778_969426_-\|ribonuclease-T	gnl\|CDD\|179951	PRK05168, PRK05168, ribonuclease T; Provisional.	7.45537e-167
NZ_CP042615.1\|WP_151293792.1\|962510_963338_-\|endopeptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.03551e-46
NZ_CP042615.1\|WP_000840481.1\|971853_972093_+\|DUF1289-domain-containing-protein	gnl\|CDD\|225850	COG3313, COG3313, Predicted Fe-S protein [General function prediction only].	7.23459e-32
NZ_CP042615.1\|WP_000493947.1\|954536_955178_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP042615.1\|WP_151293791.1\|948364_949624_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.09828e-50
NZ_CP042615.1\|WP_000181940.1\|943808_944030_-\|hypothetical-protein	gnl\|CDD\|238216	cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.	0.00940001
NZ_CP042615.1\|WP_000190982.1\|958909_959935_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP042615.1\|WP_000042978.1\|945535_945715_-\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	3.05559e-22
NZ_CP042615.1\|WP_001298528.1\|973119_973641_+\|superoxide-dismutase-[Cu-Zn]-SodC2	gnl\|CDD\|182357	PRK10290, PRK10290, superoxide dismutase [Cu-Zn] SodC2.	4.05488e-114

>NZ_CP042615.1|WP_000212657.1|950771_951077_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP042615.1|WP_151293791.1|948364_949624_-|tyrosine-type-recombinase/integrase
MPKLTDMQIRAWIKAGDRFDGKADGNGLYICYPKNYTVPFWRFRYKLAGKQRAMVIGSYSELSLSKARETAKELSARVALGYDVAAEKQERKAEALAKMEAEKNAMRVSDLASEYFERQILPRWKHPDILRRRIDKDINPCIGHMKVEDVKPRHIDDMLKGIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVSDAGGKEVSRDRWLTRDELIRLFEAMRTAKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERSKNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPAGKMQNRMIPHIQESTLPVALAKVRAEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKAALAQWADLLVALESGKDYNVTPLRRAN
>NZ_CP042615.1|WP_001000002.1|947303_948269_-|hypothetical-protein
MNDSHETTAVHRNLWQESGIPPLDYCTIERASKLLNCEIDDIWHWKDRLHIDFYVYADFLDFIEADATIHFKKDADFITDLLLMYPEEVRFTFPFLITSASNEVYIPASESGAYELFYAHKPLTVEDRDNKNVFEQIGKNSFIVRKSIACGLLRVRGSTKRHYHSQECGEPYVRLEATFDCDLYKFKMQSSQIHLSSLSDKNIYITKADLEYLHDAKVNGSFDAAKSKKRYEMAVEQELIPEIKNSNHNAERHAENREKLFKSAIYLLSKYPDECRGKKKEISPEKWRDCIVAHKDEIPPLAITNEDVILRHLRAAANGKG
>NZ_CP042615.1|WP_001090782.1|946985_947189_-|AlpA-family-phage-regulatory-protein
MNTDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLGEKITAFDAVEIHNWLAERRGKVV
>NZ_CP042615.1|WP_000412541.1|946554_946986_-|hypothetical-protein
MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYMLRTGIEGWTENDILRYCRLSSGRNYATELERQLGITLERIDEKNPDGIGTHLRYRFSCRGDVLKVITHVNHLASINDHNGLSQQEIADILKLYPDAFNAA
>NZ_CP042615.1|WP_000042978.1|945535_945715_-|DUF4222-domain-containing-protein
MSKPTGTPQPQKRYKDAHGALVTVESVSHNRVTFYRDGYQSPCVQPLARFMKEFAEVNQ
>NZ_CP042615.1|WP_001065741.1|944286_944481_-|hypothetical-protein
MNNSINTPRLTSALQLIEQAAAVLVAVSLSAEEMDATDVVDAIKACSSLVNDARAELVILGGEK
>NZ_CP042615.1|WP_151293790.1|944026_944290_-|nicotinic-acetylcholine-receptor-subunit-beta
MNINSIYRHPCELEIESLLGREEPYPDTFTPADCATERLTRARTGLVHVMNEIIPSVGGEQATVINSWLQKVTSLIDIGLIDVESAK
>NZ_CP042615.1|WP_000181940.1|943808_944030_-|hypothetical-protein
MTNIQLIEAQCRIEQVQTVLGFWLEGASPSNRDKLMIGAVMSLLNGVPEAIQEADELLGKYELQNHSGEAKHE
>NZ_CP042615.1|WP_151293789.1|943213_943816_-|hypothetical-protein
MNNFLTFHAEATPDGVNIMYRSNDGMTERVETVSYIDAVNRLDAGDYDDKPDEGMFIHLAIASGGNRGYFDYTSQHHVIMWRWLIATAFINEMRKENGTVSIIDDSGNHSVVSVYSNGIVAMPLYPVAERLAMANNIEGAMIEKYGVDVGTKNAIIFYSNMFDVEQGTLTSFGREVLADLHNSFIAELNENGIPEAPVTH
>NZ_CP042615.1|WP_000493947.1|954536_955178_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP042615.1|WP_000190982.1|958909_959935_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP042615.1|WP_000102278.1|960233_960323_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP042615.1|WP_151293792.1|962510_963338_-|endopeptidase
MARINRISITLCALLFTTLPLTPMAHASKQAGESSATTHITKKADKKKSTATTKKTQKASQKTAKKAASKSTIKSKTASSVKKSSITASKNAKTRSKHAVNKTASASFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGGSSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR
>NZ_CP042615.1|WP_151293793.1|963672_964020_+|Grx4-family-monothiol-glutaredoxin
MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSARAVRALAACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKETAAKYKSEEPDAE
>NZ_CP042615.1|WP_151293794.1|968778_969426_-|ribonuclease-T
MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKVVRKGIKASGCNRAIMVAHNANFDHSFMMAAAERASLKRNPFHPFATFDTAALAGLALGQTVLSKACQTAGMDFDSTRAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV
>NZ_CP042615.1|WP_001237796.1|969528_969936_-|lactoylglutathione-lyase
MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGLGN
>NZ_CP042615.1|WP_000840481.1|971853_972093_+|DUF1289-domain-containing-protein
MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSDGEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF
>NZ_CP042615.1|WP_096251231.1|972141_973038_+|aldo/keto-reductase-family-oxidoreductase
MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLFNDDFFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAETLKMTRQQWFRIRKAALGYDVP
>NZ_CP042615.1|WP_001298528.1|973119_973641_+|superoxide-dismutase-[Cu-Zn]-SodC2
MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTITETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPALVVNNDGKATDAVIAPRLKSLDEVKDKALMVHVGGDNMSDQPKPLGGGGERYACGVIK

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP042615_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042615_2

1727372-1727463

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042615_2

>merge|NZ_CP042615|2|1727372-1727463|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGATCATTTTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP042615|2|2|1727372-1727463|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGATCATTTTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042615.1\|WP_001143120.1\|1728502_1728730_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP042615.1\|WP_096251460.1\|1709628_1710693_-\|phosphate-starvation-inducible-protein-PhoH	unknown	unknown	gnl\|CDD\|182529
NZ_CP042615.1\|WP_001126796.1\|1723610_1723997_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP042615.1\|WP_096251465.1\|1725414_1725909_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP042615.1\|WP_151293953.1\|1743580_1744684_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|223425
NZ_CP042615.1\|WP_151293951.1\|1724004_1724817_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP042615.1\|WP_089558625.1\|1716627_1716837_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000154371.1\|1712292_1713420_-\|iron-uptake-system-protein-EfeO	unknown	unknown	gnl\|CDD\|236677
NZ_CP042615.1\|WP_000066490.1\|1745299_1745512_-\|cold-shock-protein-CspG	unknown	unknown	gnl\|CDD\|77467
NZ_CP042615.1\|WP_096251464.1\|1724813_1725404_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP042615.1\|WP_109024226.1\|1732741_1733047_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP042615.1\|WP_151293952.1\|1739018_1739711_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP042615.1\|WP_063081541.1\|1725929_1727258_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP042615.1\|WP_000191701.1\|1720892_1721531_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP042615.1\|WP_139820609.1\|1721817_1722909_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP042615.1\|WP_000270305.1\|1747386_1747479_-\|cytochrome-bd-II-oxidase-subunit-CbdX	unknown	unknown	gnl\|CDD\|173210
NZ_CP042615.1\|WP_096251251.1\|1734575_1735175_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP042615.1\|WP_096251246.1\|1744895_1745126_-\|protein-YmcE	unknown	unknown	gnl\|CDD\|292561
NZ_CP042615.1\|WP_071528143.1\|1745100_1745289_-\|cold-shock-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_001019197.1\|1744732_1744906_-\|addiction-module-toxin,-GnsA/GnsB-family	unknown	unknown	gnl\|CDD\|285401

Protein	Function_ID	Function_description	E-value
NZ_CP042615.1\|WP_001143120.1\|1728502_1728730_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP042615.1\|WP_096251460.1\|1709628_1710693_-\|phosphate-starvation-inducible-protein-PhoH	gnl\|CDD\|182529	PRK10536, PRK10536, phosphate starvation-inducible protein PhoH.	0
NZ_CP042615.1\|WP_001126796.1\|1723610_1723997_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	1.01223e-84
NZ_CP042615.1\|WP_096251465.1\|1725414_1725909_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	1.72621e-105
NZ_CP042615.1\|WP_151293953.1\|1743580_1744684_+\|4Fe-4S-binding-protein	gnl\|CDD\|223425	COG0348, NapH, Polyferredoxin [Energy production and conversion].	2.77557e-60
NZ_CP042615.1\|WP_151293951.1\|1724004_1724817_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	1.84529e-137
NZ_CP042615.1\|WP_000154371.1\|1712292_1713420_-\|iron-uptake-system-protein-EfeO	gnl\|CDD\|236677	PRK10378, PRK10378, inactive ferrous ion transporter periplasmic protein EfeO; Provisional.	0
NZ_CP042615.1\|WP_000066490.1\|1745299_1745512_-\|cold-shock-protein-CspG	gnl\|CDD\|77467	PRK09890, PRK09890, cold shock protein CspG; Provisional.	7.29129e-43
NZ_CP042615.1\|WP_096251464.1\|1724813_1725404_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.03212e-129
NZ_CP042615.1\|WP_109024226.1\|1732741_1733047_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	1.18778e-62
NZ_CP042615.1\|WP_151293952.1\|1739018_1739711_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	4.1679e-138
NZ_CP042615.1\|WP_063081541.1\|1725929_1727258_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP042615.1\|WP_000191701.1\|1720892_1721531_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
NZ_CP042615.1\|WP_139820609.1\|1721817_1722909_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP042615.1\|WP_000270305.1\|1747386_1747479_-\|cytochrome-bd-II-oxidase-subunit-CbdX	gnl\|CDD\|173210	PRK14749, PRK14749, cytochrome bd-II oxidase subunit CbdX.	0.00173781
NZ_CP042615.1\|WP_096251251.1\|1734575_1735175_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	2.20565e-82
NZ_CP042615.1\|WP_096251246.1\|1744895_1745126_-\|protein-YmcE	gnl\|CDD\|292561	pfam15939, YmcE_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system. YmcE_antitoxin is the putative antitoxin for the supposed bacterial toxin GnsA, UniProtKB:P0AC92, family pfam08178.	2.1705e-47
NZ_CP042615.1\|WP_001019197.1\|1744732_1744906_-\|addiction-module-toxin,-GnsA/GnsB-family	gnl\|CDD\|285401	pfam08178, GnsAB_toxin, GnsA/GnsB toxin of bacterial toxin-antitoxin system. This family consists of the GnsA/GnsB family. GnsA and GnsB are multicopy suppressors of the secG null mutation. These proteins participate in the synthesis of phospholipids, suggesting the functional relationship between SecG and membrane phospholipids. Over-expression of gnsA and gnsB causes a remarkable increase in the unsaturated fatty acid content. However, the gnsA-gnsB double null mutant exhibits no effect. Both proteins are predicted to possess a helix-turn-helix structure. GnsAB is a family of putative bacterial toxins (both GnsA and GnsB) that, are neutralized by the antitoxin YmcE, pfam15939.	4.76616e-19

>NZ_CP042615.1|WP_063081541.1|1725929_1727258_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHTAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP042615.1|WP_096251465.1|1725414_1725909_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDVMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP042615.1|WP_096251464.1|1724813_1725404_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDEMLREIYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFTGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLM
>NZ_CP042615.1|WP_151293951.1|1724004_1724817_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVICYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASVTMLVSVNGWLRINAHTRRCFQVREKLLHSGGAQAWVEAQPLFLYPADWMAARAPRPEAEDALALAHFQGKYNLLRRLNALKRADFSRHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAACKELL
>NZ_CP042615.1|WP_001126796.1|1723610_1723997_+|pyrimidine-utilization-protein-C
MPKSVIIPVGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP042615.1|WP_139820609.1|1721817_1722909_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMDDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP042615.1|WP_000191701.1|1720892_1721531_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP042615.1|WP_089558625.1|1716627_1716837_-|hypothetical-protein
MMLQLCATMLNVTCIASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP042615.1|WP_000154371.1|1712292_1713420_-|iron-uptake-system-protein-EfeO
MTINFRRNALQFSVAALFSSAFMANAADIPQVKVTVTDKQCEPMTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMTCGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDAIKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHRLEKALFGDNTTKGMDKYADQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKISGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKYRTKDGFETYDKLTDADRNALKGPITALAEDLAQLRGVLGLD
>NZ_CP042615.1|WP_096251460.1|1709628_1710693_-|phosphate-starvation-inducible-protein-PhoH
MVTSCTGHVLDNQRATTRGDFSSGSHLVTLYFQPHPFFSCVTDAVNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKARREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARESRDTSPILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDEAQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVRSGLSDALERFEEDEMVGIVRFGKEDCVRSALCQRTLHAYS
>NZ_CP042615.1|WP_001143120.1|1728502_1728730_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP042615.1|WP_109024226.1|1732741_1733047_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTRVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP042615.1|WP_096251251.1|1734575_1735175_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIAALTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGSVPARRIDNLRQKTLTALWQWLSEFAVRCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP042615.1|WP_151293952.1|1739018_1739711_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTRARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP042615.1|WP_151293953.1|1743580_1744684_+|4Fe-4S-binding-protein
MVCNLTDWQNHDREKKNPLAAAASTTGGKLPWNDWRNATTRRKATQLLLLAMNIYIAITFWYWVRYYETAGSTTFVARPGGIEGWLPIAGLMNLKYSLATGQLPSVHAAAMLLLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYLLLSFFLYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGTATLISVIVLLIASLFIRHAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKNCPSRIPVDKLIQVRTVECTGCMTCVESCPVASTLTFSLQKPAANKKAFALSGWLMTLLVLGIMFAVIGYAMYSGVWQSPVPEELYRRLIPQAPMIGH
>NZ_CP042615.1|WP_001019197.1|1744732_1744906_-|addiction-module-toxin,-GnsA/GnsB-family
MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKMTGLESYDVKIKIM
>NZ_CP042615.1|WP_096251246.1|1744895_1745126_-|protein-YmcE
MRRWISQNNIRLPRGAFFISALYFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLACCCLLRPEEVNSEY
>NZ_CP042615.1|WP_071528143.1|1745100_1745289_-|cold-shock-protein
MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITFDNVALQIRTEHAPLDFTK
>NZ_CP042615.1|WP_000066490.1|1745299_1745512_-|cold-shock-protein-CspG
MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRTLNENQKVEFSIEQGQRGPAAANVVTL
>NZ_CP042615.1|WP_000270305.1|1747386_1747479_-|cytochrome-bd-II-oxidase-subunit-CbdX
MWYLLWFVGILLMCSLSTLVLVWLDPRLKS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP042615_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042615_3

2022386-2022481

Orphan

Consensus_repeat	Method
GTGGTAATTTGCTGGTAATCTGCTGGTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042615_3

>merge|NZ_CP042615|3|2022386-2022481|CRISPRCasFinder
GTGGTAATTTGCTGGTAATCTGCTGGTACAGCATTGCTTACAGGCATTGGTATTGCTGGCTTTGAGGTGGTAATTTGCTGGTAATCTGCTGGTACA

>NZ_CP042615|3|3|2022386-2022481|CRISPRCasFinder
GTGGTAATTTGCTGGTAATCTGCTGGTACA	GCATTGCTTACAGGCATTGGTATTGCTGGCTTTGAG
GTGGTAATTTGCTGGTAATCTGCTGGTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042615.1\|WP_096251958.1\|2019305_2019833_-\|phage-N-6-adenine-methyltransferase	unknown	unknown	gnl\|CDD\|273769
NZ_CP042615.1\|WP_021549877.1\|2025592_2025781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000566866.1\|2018959_2019130_-\|protein-ninF	unknown	unknown	gnl\|CDD\|283468
NZ_CP042615.1\|WP_000166207.1\|2022865_2023012_-\|DUF2740-domain-containing-protein	unknown	unknown	gnl\|CDD\|287804
NZ_CP042615.1\|WP_001054987.1\|2023447_2023672_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP042615.1\|WP_000394871.1\|2024531_2024828_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_033546449.1\|2023044_2023338_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|336083
NZ_CP042615.1\|WP_096251957.1\|2020250_2020463_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_014532157.1\|2026419_2026695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000092875.1\|2023816_2024491_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP042615.1\|WP_151294037.1\|2026951_2027557_+\|recombinase	unknown	unknown	gnl\|CDD\|377346
NZ_CP042615.1\|WP_151294031.1\|2019829_2020270_-\|recombination-protein-NinB	unknown	unknown	gnl\|CDD\|368607
NZ_CP042615.1\|WP_000131492.1\|2020547_2021984_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274672
NZ_CP042615.1\|WP_151294028.1\|2018244_2018967_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|226171
NZ_CP042615.1\|WP_151294026.1\|2017595_2017958_-\|RusA-family-crossover-junction-endodeoxyribonuclease	unknown	unknown	gnl\|CDD\|182075
NZ_CP042615.1\|WP_151294035.1\|2025261_2025534_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000167595.1\|2025859_2026330_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042615.1\|WP_000002244.1\|2017954_2018245_-\|DUF1364-domain-containing-protein	unknown	unknown	gnl\|CDD\|377777
NZ_CP042615.1\|WP_001254257.1\|2019126_2019309_-\|NinE-family-protein	unknown	unknown	gnl\|CDD\|283078
NZ_CP042615.1\|WP_000158285.1\|2020449_2020548_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042615.1\|WP_000566866.1\|2018959_2019130_-\|protein-ninF	gnl\|CDD\|283468	pfam05810, NinF, NinF protein. This family consists of several bacteriophage NinF proteins as well as related sequences from E. coli.	6.32186e-16
NZ_CP042615.1\|WP_096251958.1\|2019305_2019833_-\|phage-N-6-adenine-methyltransferase	gnl\|CDD\|273769	TIGR01712, DNA_N-6-adenine-methyltransferase_M.T1, phage N-6-adenine-methyltransferase. This model is a fragment-mode model for a phage-borne DNA N-6-adenine-methyltransferase. [Mobile and extrachromosomal element functions, Prophage functions, DNA metabolism, Restriction/modification].	2.23381e-85
NZ_CP042615.1\|WP_001054987.1\|2023447_2023672_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.18048e-21
NZ_CP042615.1\|WP_033546449.1\|2023044_2023338_-\|hypothetical-protein	gnl\|CDD\|336083	pfam05269, Phage_CII, Bacteriophage CII protein. This family consists of several phage CII regulatory proteins. CII plays a key role in the lysis-lysogeny decision in bacteriophage lambda and related phages.	7.76954e-44
NZ_CP042615.1\|WP_151294037.1\|2026951_2027557_+\|recombinase	gnl\|CDD\|377346	pfam04404, ERF, ERF superfamily. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to ERF.	3.12227e-41
NZ_CP042615.1\|WP_000092875.1\|2023816_2024491_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	4.72694e-28
NZ_CP042615.1\|WP_151294031.1\|2019829_2020270_-\|recombination-protein-NinB	gnl\|CDD\|368607	pfam05772, NinB, NinB protein. The ninR region of phage lambda contains two recombination genes, orf (ninB) and rap (ninG), that have roles when the RecF and RecBCD recombination pathways of E. coli, respectively, operate on phage lambda. NinB binds to single-stranded DNA.	3.46411e-57
NZ_CP042615.1\|WP_001254257.1\|2019126_2019309_-\|NinE-family-protein	gnl\|CDD\|283078	pfam05322, NinE, NINE Protein. This family consists of NINE proteins from several bacteriophages and from E. coli.	1.11282e-22
NZ_CP042615.1\|WP_151294028.1\|2018244_2018967_-\|DNA-binding-protein	gnl\|CDD\|226171	COG3645, COG3645, Uncharacterized phage-encoded protein [Function unknown].	1.13597e-48
NZ_CP042615.1\|WP_151294026.1\|2017595_2017958_-\|RusA-family-crossover-junction-endodeoxyribonuclease	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	7.59022e-40
NZ_CP042615.1\|WP_000002244.1\|2017954_2018245_-\|DUF1364-domain-containing-protein	gnl\|CDD\|377777	pfam07102, DUF1364, Protein of unknown function (DUF1364). This family consists of several bacterial and phage proteins of around 95 residues in length. The function of this family is unknown.	1.58548e-50
NZ_CP042615.1\|WP_000131492.1\|2020547_2021984_-\|AAA-family-ATPase	gnl\|CDD\|274672	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model. [Mobile and extrachromosomal element functions, Prophage functions].	0
NZ_CP042615.1\|WP_000166207.1\|2022865_2023012_-\|DUF2740-domain-containing-protein	gnl\|CDD\|287804	pfam10872, DUF2740, Protein of unknown function (DUF2740). This family of proteins with unknown function has a highly conserved sequence.	4.87764e-15

>NZ_CP042615.1|WP_000131492.1|2020547_2021984_-|AAA-family-ATPase
MTDNFYAPPHSIEAEQAVIGGLLLDDDSSERVQKVLAMLKPDSFYSRPHKILFEEITRMHREQKPVDGLTLFDELERKSLTASVGGFAYIAEIAKNTPSAANIVAYAMQVRETAMERYAINRMTEATELLYSRNGMTATQKYEAIQAIFTQLTDHAKTGSRRGLRSFGEVMEDWVSDLEKRFDPSGEQRGMSTGIPSLDRMLSPKGLVKGSLFVIGARPKMGKTTLYSQMAINCAVHEKKPALMFSLEMPGDQILEKLVGQKSGVNPNIFYLPATNDADDGYQGDYDGDFNRAIETANRLSEIDMLYIDDTPGLSLAQIVSESRRIKREKGCVGMILVDYLTLMTAEKADRNDLAYGMITKGLKNLAKELDCVVVLLTQLNRALESRTNKRPLPSDSRDTGQIEQDCDYWVGIHREGAFDDSVPPGETELILRLNRHGNTGTVYCIQANGAIYDTDQQSAEMRRREREEPQSKKKGGF
>NZ_CP042615.1|WP_000158285.1|2020449_2020548_-|hypothetical-protein
MTIYITELITGAIYTVALFYWIKNEGDPDGHR
>NZ_CP042615.1|WP_096251957.1|2020250_2020463_-|hypothetical-protein
MDTVNGICSDAPRAKKCKCGKSPTIFDMENGCQIYCTNHAAVAAANYRSAVTEWNNLKSVREGSHEKTNL
>NZ_CP042615.1|WP_151294031.1|2019829_2020270_-|recombination-protein-NinB
MKKLTFEIRSPAHQQNAIHAVQQILPDPTKPIVVTIQERNRSLDQNRKLWACTGDVSRQVEWHGRWLDAESWKCVFTAALKQQDVVPNLAGNGFVVIGQSTSRMRVSEFAELLELIQAFGTERGVKWSDEARLALEWKARWGDRAA
>NZ_CP042615.1|WP_096251958.1|2019305_2019833_-|phage-N-6-adenine-methyltransferase
MTIKSNTPAHDKDCWQTPLWLFDALDIEFGFWLDSAASDKNALCAHWLTEADDALNSEWISHGAIWNNPPYSNIRPWVEKAAEQCIQQRQTVVMLVPEDMSVGWFSKALESVDEVRIITDGRINFVEPSTGLEKKGNSKGSMLLIWRPFISPRRMFTTVSKAALMAIGQGVRRAE
>NZ_CP042615.1|WP_001254257.1|2019126_2019309_-|NinE-family-protein
MRRQRRSITDIICENCKYLPTKRSRNKRKPIPKESDVKTFNYTAHLWDIRWLRHRARNTR
>NZ_CP042615.1|WP_000566866.1|2018959_2019130_-|protein-ninF
MIDPNRSYEQESVERALTCANCGQKLHVLEVHVCEHCCAELMSDPNSSMYEEEDDE
>NZ_CP042615.1|WP_151294028.1|2018244_2018967_-|DNA-binding-protein
MNELINGNVIKMTSIEIAELVGKRHDNVKRTIETLVKNGVIRLPQIEVSERINNLGFNVQYEHYVFEGEKGKRDSIIVVAQLSPEFTARLVDRWRELEEAAVNIPKTLPEALRLAADLAEQKMQLENQLAIAAPKVEFADRVGEASGILIGNFAKVVGIGQNKLFAWMRDHKILIASGSRRNVPMQEYMDRGYFAVKETAVNTNHGIQISFTTKITGRGQQWLTRKLLDNGMLKATGEAA
>NZ_CP042615.1|WP_000002244.1|2017954_2018245_-|DUF1364-domain-containing-protein
MANLRKEARGRECQVRIYGVCNGNPETTVLAHYRMAGICGTGMKPDDLIGAWACSACHDEIDRRTHNLDNKDARLYHLEGVIRTQAILLKEGKIKS
>NZ_CP042615.1|WP_151294026.1|2017595_2017958_-|RusA-family-crossover-junction-endodeoxyribonuclease
MNEYQFVLPYPPSVNTYWRRRGSQYYISDKGQKYRKDVQKIIRQLKLDIFTKSRLRIKVIADVPDSRRRDLDNILKGLLDSLIHDGFAEDDEQFDDIRVIRGVKVPGGRLGIKITELENV
>NZ_CP042615.1|WP_000166207.1|2022865_2023012_-|DUF2740-domain-containing-protein
MTKQLSPYQDKIHKHILRDRFLSSFKQPGRFRAELEKVKLMQKEKGHE
>NZ_CP042615.1|WP_033546449.1|2023044_2023338_-|hypothetical-protein
MVRANKRNEALRIESALLNKIAMLGTEKTAEAVGVDKSQISRWKRDWIPKFSMLLAVLEWGVVDDDMARLARQVASILTNKKRPEATERSEQIQMEF
>NZ_CP042615.1|WP_001054987.1|2023447_2023672_-|helix-turn-helix-domain-containing-protein
MNLVIQRALKIVGSQKRLADKCGVTQPAVHKWLKGGLVSPEKVTAIVNATGGQIKAYEIRPDLPHLFPKPNQAA
>NZ_CP042615.1|WP_000092875.1|2023816_2024491_+|helix-turn-helix-transcriptional-regulator
MSSAGVSQSQLADMVGISQPAIQKMSSGKTNGSRKMVELANALKVRPEWLSSGIGEMRDGAHEEPSNVRESSLKAVVWEDIKRNDDEFVALPLLNVSLSAGSGSCELEESSEFSLVFRKHYLKKMGVSERSAKLVRVVGQSMEPTLHDGDVVGVNTQDTTIRDGKTYAICQSDLLRVKTLIATPTSVIIRSINREEYPDEVMDRDEFHETVRIIGRVFWSSHSW
>NZ_CP042615.1|WP_000394871.1|2024531_2024828_+|hypothetical-protein
MEFLIVFVVVLVIILFVLLSISKKLSQVIEHSSNRAKEEEHLIDIKEILSDIKITLDEIKYTTDLIEQYKIPTPNERKAIDQYRIDLEIDEMLSKRKD
>NZ_CP042615.1|WP_151294035.1|2025261_2025534_+|hypothetical-protein
MAVVITYLADDNARNRRRARRQAQREQAMQEQRLARKIALKLSGCVRADKTASLGSLRCKKADECSGSICLPNVALYAAGYRKSKQLTAR
>NZ_CP042615.1|WP_021549877.1|2025592_2025781_+|hypothetical-protein
MERKFEIWLDSGANIHSCKKTVVTLDDLGLSENEWNEMDQDEKDENMRDVAFETLDWGWKEI
>NZ_CP042615.1|WP_000167595.1|2025859_2026330_+|hypothetical-protein
MTKSWSVPFPESETEHDGMPVFWRFQATVEEDGIKIFALQYIAFHQTEHYAWLVPAHWIVNFKPAPNQWLQEWKQRRNRYAIKKVAKNAERSFAFPTKKLAIESLLRRKKYHLMRIKQDLAVVSTLVDGMKNIDTSTPDIEYNFGHNQETENWVFY
>NZ_CP042615.1|WP_014532157.1|2026419_2026695_+|hypothetical-protein
MEIFFALQCEGFFICIPITLHSRRFRYAIKQKEHPMQQFAIAGAASVRPFNPILSVQHSRKNILTGADFKQPRMKSLLEKLWDILKQQGRP
>NZ_CP042615.1|WP_151294037.1|2026951_2027557_+|recombinase
MSKEFYARLAAIQENLNAPKNQYNSFGKYKYRSCEDILEGVKPLLNGLFLSISDEVVLIGDRYYVKATATITDGENSHTATALAREEESKKGMDSAQVTGATSSYARKYCLNGLFGIDDAKDADTGEHKHQQNAAAKQSKPSPTPERVLKAFTDAAMQKNTVEELKQAFAKAWKMLEGTPEQHKAQDVYNIRRDELEGAAA

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Crispr_ID: NZ_CP042615_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042615_4

4798645-4798917

Unclear

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGNCAGCGGGGATAAACCG	CRT

4 spacers

cas3

The CRISPR arrays of NZ_CP042615_4

>merge|NZ_CP042615|4|4798645-4798917|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGGTTATTTAACGCCGTTGTGTTCCAGACTGAAAGAGTTCCCCGCGCCAGCGGGGATAAACCGAAAATAACCAGTCGGTTTTATATTGGGTCCGAGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTAGCTCCGCAATGCTGGATATCACTGATGAGTTCCCCGCGTCAGCGGGGATAAACCGGACTTGTTATCATTTTTTAAGTTGTCGAACTTATGTTCCCCACGTCAGCGGGGATAACCAT

>NZ_CP042615|4|1|4798645-4798856|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTTAACGCCGTTGTGTTCCAGACTGAAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACCAGTCGGTTTTATATTGGGTCCGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTAGCTCCGCAATGCTGGATATCACTGAT
GAGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP042615|4|4|4798645-4798917|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTTAACGCCGTTGTGTTCCAGACTGAAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACCAGTCGGTTTTATATTGGGTCCGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTAGCTCCGCAATGCTGGATATCACTGAT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GACTTGTTATCATTTTTTAAGTTGTCGAACTT
ATGTTCCCCACGTCAGCGGGGATAACCAT

>NZ_CP042615|4|1|4798645-4798917|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GTTATTTAACGCCGTTGTGTTCCAGACTGAAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAAATAACCAGTCGGTTTTATATTGGGTCCGA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTAGCTCCGCAATGCTGGATATCACTGAT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	GACTTGTTATCATTTTTTAAGTTGTCGAACTT
ATGTTCCCCACGTCAGCGGGGATAACCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042615.1\|WP_000206975.1\|4779562_4779892_+\|YqcC-family-protein	unknown	unknown	gnl\|CDD\|225640
NZ_CP042615.1\|WP_151295166.1\|4778394_4778940_+\|SecY-interacting-protein	unknown	unknown	gnl\|CDD\|235324
NZ_CP042615.1\|WP_151295174.1\|4810427_4812227_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP042615.1\|WP_000956458.1\|4815011_4815164_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP042615.1\|WP_151295167.1\|4780689_4781139_+\|flavodoxin	unknown	unknown	gnl\|CDD\|181230
NZ_CP042615.1\|WP_151295176.1\|4816946_4817342_+\|hypothetical-protein	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP042615.1\|WP_151295168.1\|4792364_4793156_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP042615.1\|WP_000097082.1\|4781573_4782926_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_CP042615.1\|WP_151295170.1\|4797633_4798305_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP042615.1\|WP_151295173.1\|4806550_4807411_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP042615.1\|WP_001290706.1\|4812226_4813939_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP042615.1\|WP_000021321.1\|4802061_4802847_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP042615.1\|WP_151295169.1\|4795108_4796422_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP042615.1\|WP_151295171.1\|4798962_4800441_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP042615.1\|WP_000100411.1\|4777478_4778327_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
NZ_CP042615.1\|WP_000210878.1\|4793383_4795021_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP042615.1\|WP_151295165.1\|4772730_4774098_-\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP042615.1\|WP_096251377.1\|4807557_4808133_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP042615.1\|WP_151295175.1\|4814012_4814747_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP042615.1\|WP_151295172.1\|4802916_4804371_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354

Protein	Function_ID	Function_description	E-value
NZ_CP042615.1\|WP_000206975.1\|4779562_4779892_+\|YqcC-family-protein	gnl\|CDD\|225640	COG3098, COG3098, Uncharacterized protein conserved in bacteria [Function unknown].	7.56606e-53
NZ_CP042615.1\|WP_151295166.1\|4778394_4778940_+\|SecY-interacting-protein	gnl\|CDD\|235324	PRK04968, PRK04968, SecY interacting protein Syd; Provisional.	3.95326e-112
NZ_CP042615.1\|WP_151295174.1\|4810427_4812227_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP042615.1\|WP_000956458.1\|4815011_4815164_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP042615.1\|WP_151295167.1\|4780689_4781139_+\|flavodoxin	gnl\|CDD\|181230	PRK08105, PRK08105, flavodoxin; Provisional.	3.96165e-104
NZ_CP042615.1\|WP_151295176.1\|4816946_4817342_+\|hypothetical-protein	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.09425e-27
NZ_CP042615.1\|WP_151295168.1\|4792364_4793156_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	2.50564e-158
NZ_CP042615.1\|WP_000097082.1\|4781573_4782926_+\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	6.41821e-161
NZ_CP042615.1\|WP_151295170.1\|4797633_4798305_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.04704e-151
NZ_CP042615.1\|WP_151295173.1\|4806550_4807411_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	2.15115e-88
NZ_CP042615.1\|WP_001290706.1\|4812226_4813939_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP042615.1\|WP_000021321.1\|4802061_4802847_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP042615.1\|WP_151295169.1\|4795108_4796422_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP042615.1\|WP_151295171.1\|4798962_4800441_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	3.78032e-110
NZ_CP042615.1\|WP_000100411.1\|4777478_4778327_-\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	0
NZ_CP042615.1\|WP_000210878.1\|4793383_4795021_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP042615.1\|WP_151295165.1\|4772730_4774098_-\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP042615.1\|WP_096251377.1\|4807557_4808133_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	1.05428e-87
NZ_CP042615.1\|WP_151295175.1\|4814012_4814747_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.22796e-136
NZ_CP042615.1\|WP_151295172.1\|4802916_4804371_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.15375e-80

>NZ_CP042615.1|WP_151295170.1|4797633_4798305_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTREKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRRGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTRVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
>NZ_CP042615.1|WP_151295169.1|4795108_4796422_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFWGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDPDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIREFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNPGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFSEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGRHKSDFI
>NZ_CP042615.1|WP_000210878.1|4793383_4795021_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP042615.1|WP_151295168.1|4792364_4793156_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFRVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP042615.1|WP_000097082.1|4781573_4782926_+|MFS-transporter
MSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSMFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQKELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIELKPVAGQ
>NZ_CP042615.1|WP_151295167.1|4780689_4781139_+|flavodoxin
MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDWLPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDTRGFQPNLRYGVIALGDSSYVNFCNGGKQFDGLLQEQSAQRVGEMLLIDASENPEPETESNPWVEHWGTLLS
>NZ_CP042615.1|WP_000206975.1|4779562_4779892_+|YqcC-family-protein
MTTHDRVRFQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLENNQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS
>NZ_CP042615.1|WP_151295166.1|4778394_4778940_+|SecY-interacting-protein
MDDLTAQALKDFTARYCDAWHEERKSWPLSEELYGVPSPCIISTTEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQTSSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGTRKRTHLASNLAEFLNQLKPLL
>NZ_CP042615.1|WP_000100411.1|4777478_4778327_-|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGLKADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSANLIESKSFKLYLNSFNQTRFNNWDEVRQTLERDLSTCAQGKVSVALYRLDELEGQPIGHFNGTCIDDQDITIDNYEFTTDYLENATSGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRYLVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPSTTRLVRQ
>NZ_CP042615.1|WP_151295165.1|4772730_4774098_-|L-serine-ammonia-lyase
MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTRVVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQHEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQDSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRGGIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENAAGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISGAEVGCRGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPCIERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMKIVACD
>NZ_CP042615.1|WP_151295171.1|4798962_4800441_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTRAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVENNAKRYDAMNKGIFKELTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP042615.1|WP_000021321.1|4802061_4802847_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP042615.1|WP_151295172.1|4802916_4804371_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGPVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDCKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWTLLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP042615.1|WP_151295173.1|4806550_4807411_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAATASWQAAQDFSGCTLAHWKIEPQPAVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGADKNATLPSGMQQLNIVPCALPDWLVSIENLKNVSRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHAECQ
>NZ_CP042615.1|WP_096251377.1|4807557_4808133_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISQIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNSINAGVVALSTTNTGVWTLAKKLL
>NZ_CP042615.1|WP_151295174.1|4810427_4812227_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLARVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQTAASEWRARVVDALKSRAPVAAPSQSVATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQAEVENEVHVTVGVVCYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLARSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
>NZ_CP042615.1|WP_001290706.1|4812226_4813939_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP042615.1|WP_151295175.1|4814012_4814747_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAARQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRTNLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP042615.1|WP_000956458.1|4815011_4815164_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP042615.1|WP_151295176.1|4816946_4817342_+|hypothetical-protein
MHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDSSQRAGKVLICTQVLESSVDCDMDEMISDRPLLIC

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Crispr_ID: NZ_CP042615_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042615_5

4824017-4824473

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGNCAGCGGGGATAAACCG	CRT

7 spacers

cas1,cas6e,cas5,cas7,cas8e,cas3

The CRISPR arrays of NZ_CP042615_5

>merge|NZ_CP042615|5|4824017-4824473|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGTCAGCGGGGATAAACCGGGCGCACCTGAGCTGGCGCGGCGCATCGAGGCGTGTTCCCCGCGTCAGCGGGGATAAACCGGCGCGGCTAACAACACTAAAACCCGAGGATATCGTGTTCCCCGCGTCAGCGGGGATAAACCGTACTCGATCAGGGGGCCAGGCGTTGCATTAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAACTGGCACCACAGGATGATGGCGGCGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTCGACCGACTGGAGGCGGAGATTGTCGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCCGTCGTGCCGTGTTCACCTTTACGAACCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCGAAGGACTTGCTCGTGTGGTTAAAGCCGTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP042615|5|2|4824017-4824473|PILER-CR
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGCACCTGAGCTGGCGCGGCGCATCGAGGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCGCGGCTAACAACACTAAAACCCGAGGATATC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TACTCGATCAGGGGGCCAGGCGTTGCATTAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAACTGGCACCACAGGATGATGGCGGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCGACCGACTGGAGGCGGAGATTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGTCGTGCCGTGTTCACCTTTACGAACCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCGAAGGACTTGCTCGTGTGGTTAAAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP042615|5|5|4824017-4824473|CRISPRCasFinder
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGCACCTGAGCTGGCGCGGCGCATCGAGGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCGCGGCTAACAACACTAAAACCCGAGGATATC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TACTCGATCAGGGGGCCAGGCGTTGCATTAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAACTGGCACCACAGGATGATGGCGGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCGACCGACTGGAGGCGGAGATTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGTCGTGCCGTGTTCACCTTTACGAACCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCGAAGGACTTGCTCGTGTGGTTAAAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP042615|5|2|4824017-4824473|CRT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GGCGCACCTGAGCTGGCGCGGCGCATCGAGGC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	GCGCGGCTAACAACACTAAAACCCGAGGATATC
GTGTTCCCCGCGTCAGCGGGGATAAACCG	TACTCGATCAGGGGGCCAGGCGTTGCATTAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCAACTGGCACCACAGGATGATGGCGGCGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTCGACCGACTGGAGGCGGAGATTGTCGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCCGTCGTGCCGTGTTCACCTTTACGAACCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGCGAAGGACTTGCTCGTGTGGTTAAAGCC
GTGTTCCCCGCGTCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042615.1\|WP_001295182.1\|4831891_4832653_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP042615.1\|WP_000863205.1\|4836874_4838302_+\|UbiD-family-decarboxylase	unknown	unknown	gnl\|CDD\|223121
NZ_CP042615.1\|WP_025210794.1\|4828179_4828785_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP042615.1\|WP_000956458.1\|4815011_4815164_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP042615.1\|WP_000104455.1\|4838586_4839951_-\|GntP-family-transporter	unknown	unknown	gnl\|CDD\|182094
NZ_CP042615.1\|WP_151295178.1\|4818155_4819718_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP042615.1\|WP_001290706.1\|4812226_4813939_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP042615.1\|WP_033870600.1\|4822707_4823631_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP042615.1\|WP_001521151.1\|4835727_4836135_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP042615.1\|WP_096251165.1\|4836281_4836875_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_CP042615.1\|WP_151295180.1\|4822061_4822682_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP042615.1\|WP_001521156.1\|4821333_4822080_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP042615.1\|WP_151295179.1\|4820267_4821323_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP042615.1\|WP_151295182.1\|4830861_4831911_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP042615.1\|WP_151295183.1\|4833411_4834551_+\|murein-hydrolase-activator-NlpD	unknown	unknown	gnl\|CDD\|236782
NZ_CP042615.1\|WP_151295177.1\|4817335_4818058_+\|hypothetical-protein	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP042615.1\|WP_151295176.1\|4816946_4817342_+\|hypothetical-protein	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP042615.1\|WP_151295181.1\|4826752_4828180_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP042615.1\|WP_151295175.1\|4814012_4814747_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP042615.1\|WP_074494580.1\|4832646_4833273_+\|protein-L-isoaspartate-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974

Protein	Function_ID	Function_description	E-value
NZ_CP042615.1\|WP_001295182.1\|4831891_4832653_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP042615.1\|WP_000863205.1\|4836874_4838302_+\|UbiD-family-decarboxylase	gnl\|CDD\|223121	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism].	7.18081e-171
NZ_CP042615.1\|WP_025210794.1\|4828179_4828785_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.67371e-147
NZ_CP042615.1\|WP_000956458.1\|4815011_4815164_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP042615.1\|WP_000104455.1\|4838586_4839951_-\|GntP-family-transporter	gnl\|CDD\|182094	PRK09821, PRK09821, putative transporter; Provisional.	0
NZ_CP042615.1\|WP_151295178.1\|4818155_4819718_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP042615.1\|WP_001290706.1\|4812226_4813939_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP042615.1\|WP_033870600.1\|4822707_4823631_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	9.791e-156
NZ_CP042615.1\|WP_001521151.1\|4835727_4836135_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.36784e-18
NZ_CP042615.1\|WP_096251165.1\|4836281_4836875_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	4.58923e-109
NZ_CP042615.1\|WP_151295180.1\|4822061_4822682_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.39644e-78
NZ_CP042615.1\|WP_001521156.1\|4821333_4822080_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.08958e-47
NZ_CP042615.1\|WP_151295179.1\|4820267_4821323_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.00052e-154
NZ_CP042615.1\|WP_151295182.1\|4830861_4831911_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP042615.1\|WP_151295183.1\|4833411_4834551_+\|murein-hydrolase-activator-NlpD	gnl\|CDD\|236782	PRK10871, nlpD, murein hydrolase activator NlpD.	0
NZ_CP042615.1\|WP_151295177.1\|4817335_4818058_+\|hypothetical-protein	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.18385e-39
NZ_CP042615.1\|WP_151295176.1\|4816946_4817342_+\|hypothetical-protein	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.09425e-27
NZ_CP042615.1\|WP_151295181.1\|4826752_4828180_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP042615.1\|WP_151295175.1\|4814012_4814747_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.22796e-136
NZ_CP042615.1\|WP_074494580.1\|4832646_4833273_+\|protein-L-isoaspartate-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	1.94342e-124

>NZ_CP042615.1|WP_033870600.1|4822707_4823631_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPCGARADKLLYQAKLALTEDLRLKVVRKMYELRFRELPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP042615.1|WP_151295180.1|4822061_4822682_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLLPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELRGAFRFFVLSQERPAESDIFTIECRPFAPELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVRGQVEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSRGMAKAARSAVV
>NZ_CP042615.1|WP_001521156.1|4821333_4822080_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDAPYRLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP042615.1|WP_151295179.1|4820267_4821323_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACRVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP042615.1|WP_151295178.1|4818155_4819718_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRYKDGTTGKLAPVDLADENVVDIAAPRADLRGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGAQTTKFNKDHFIKRGVTEHVCPHCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYGGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDMVFPWLGPTRTSELAGAVVTADQVNKLQAYWGMPRRIRIDFNTTTVGNCDICDEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAARRKKQEAAE
>NZ_CP042615.1|WP_151295177.1|4817335_4818058_+|hypothetical-protein
MLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIASVVKPYANGAHAWEMSVVRVRRSWWKKHRDEFSLLEGEAFRQWCIEQRKDPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP042615.1|WP_151295176.1|4816946_4817342_+|hypothetical-protein
MHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDSSQRAGKVLICTQVLESSVDCDMDEMISDRPLLIC
>NZ_CP042615.1|WP_000956458.1|4815011_4815164_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP042615.1|WP_151295175.1|4814012_4814747_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAARQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRTNLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP042615.1|WP_001290706.1|4812226_4813939_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP042615.1|WP_151295181.1|4826752_4828180_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTRGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPWHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADESLPAVQSASVDVVWMAEQPLSPGQRYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATTAPSEFSAFELELNAPVRRHFPHWGARDLLGDK
>NZ_CP042615.1|WP_025210794.1|4828179_4828785_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHHGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP042615.1|WP_151295182.1|4830861_4831911_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCRVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP042615.1|WP_001295182.1|4831891_4832653_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP042615.1|WP_074494580.1|4832646_4833273_+|protein-L-isoaspartate-O-methyltransferase
MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKARDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA
>NZ_CP042615.1|WP_151295183.1|4833411_4834551_+|murein-hydrolase-activator-NlpD
MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAPANTNSGMLITPPPKMGTTSTAQQPQIQPVQQPQIQATQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSYSGSTYTVKKGDTLFYIARITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGGNAITRADAAEQGVVIKPAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPTATTVTAPVTVPTASTTEPTVSSTSTSTPISTGRWPTEGKVIETFGASEGGNKGIDIAGSKGQAIIATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMGSTGTSSTRLHFEIRYKGKSVNPLRYLPQR
>NZ_CP042615.1|WP_001521151.1|4835727_4836135_-|MarR-family-transcriptional-regulator
MALRNKAFHQLRQLFQQHTARWQHELPDLTKPQYAVMRAIADKPGIEQVALIEAAVSTKATLAEMLARMENRGLVRREHDAADKRRRFVWLTAEGEKVLAAAIPIGDSVDEEFLGRLSAEEKELFMQLVRKMMSK
>NZ_CP042615.1|WP_096251165.1|4836281_4836875_+|UbiX-family-flavin-prenyltransferase
MRLIVGMTGATGAPLGVALLQALREMPNVETHLVMSNWAKTTIELETPYSARDVAALADFSHNPADQAATISSGSFRTDGMIVIPCSMKTLAGIRVGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHARRWQGLPQVRNFSQENE
>NZ_CP042615.1|WP_000863205.1|4836874_4838302_+|UbiD-family-decarboxylase
MAFDDLRSFLQALDDHGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPIAPERRANPAWAQNTVDGDEINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRTRPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLAARK
>NZ_CP042615.1|WP_000104455.1|4838586_4839951_-|GntP-family-transporter
MSTITLLCIALTGVIMLLLLVIKAKVQPFVALLLVSLLVALAAGIPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTIAALTLAAFFLGIPVFFDVGFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPPHPGPVAAAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKCQYAMSVEVLEQMQLAPASEEGATKLSDKINPPGVALVTSLIVIPIAIIMAGTVSATLMPPSHPLLGTLQLIGSPMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVESGVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQCVLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCVWAVI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042615_5	5.4\|4824230\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824230-4824261	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246571-246602	0	1.0
NZ_CP042615_5	5.5\|4824291\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824291-4824322	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246693-246724	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP050835	Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence	126326-126357	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_LR213454	Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 plasmid 3	61057-61088	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KU295131	Escherichia coli strain BK28009 plasmid pBK28009, complete sequence	50259-50290	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KU302802	Enterobacter cloacae strain SZECL1 plasmid pNDM1_SZ2 clone ST231, complete sequence	89990-90021	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KU302801	Enterobacter cloacae strain SZECL1 plasmid pNDM1_SZ1 clone ST231, complete sequence	89990-90021	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KJ958927	Klebsiella pneumoniae strain Kpn-3002cz plasmid pS-3002cz, complete sequence	72720-72751	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KT818627	Klebsiella pneumoniae strain U25 plasmid U25P002, complete sequence	118150-118181	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KM023153	Escherichia coli strain PGR46 plasmid pPGRT46, complete sequence	35336-35367	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KY848295	Shigella flexneri Y strain RC960 plasmid pRC960-1, complete sequence	14217-14248	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP025845	Escherichia coli strain 720632 plasmid p720632_72, complete sequence	54014-54045	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP052410	Klebsiella pneumoniae strain C17KP0008 plasmid pC17KP0008-3, complete sequence	22064-22095	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_AP018755	Klebsiella pneumoniae strain KP67 plasmid pKP6702, complete sequence	8567-8598	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_LT882487	Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2	70299-70330	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP046430	Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence	80233-80264	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NC_010886	Klebsiella pneumoniae plasmid pK245, complete sequence	11237-11268	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_KJ187752	Klebsiella pneumoniae strain 7433 plasmid pTR2, complete sequence	99761-99792	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040574	Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence	81366-81397	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	KY051550	Escherichia coli plasmid pFZ11, complete sequence	47228-47259	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP024474	Shigella flexneri 7b strain 94-3007 plasmid unnamed1, complete sequence	31389-31420	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP026764	Shigella flexneri strain 04-3145 plasmid unnamed, complete sequence	5241-5272	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP028955	Klebsiella pneumoniae strain AR_0141 plasmid unnamed2, complete sequence	17112-17143	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP006642	Escherichia coli PCN061 plasmid PCN061p6, complete sequence	137204-137235	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP033627	Klebsiella pneumoniae strain 4743 plasmid unnamed2, complete sequence	173784-173815	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	HG969996	Klebsiella pneumoniae plasmid pIT-12C47, complete sequence	32687-32718	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP045558	Citrobacter sp. S39 plasmid pS39-3, complete sequence	26875-26906	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP020531	Enterobacter cloacae strain 174 plasmid unnamed3, complete sequence	38937-38968	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NC_014725	Edwardsiella tarda strain CK41 plasmid pCK41, complete sequence	37307-37338	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP020856	Klebsiella pneumoniae strain KPN528 plasmid pKPN528-3, complete sequence	34008-34039	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	82994-83025	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	LC549808	Klebsiella pneumoniae VNCKp83 plasmid pVNCKp83 DNA, complete sequence	25949-25980	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NC_019165	Klebsiella pneumoniae plasmid pKPN101-IT, complete sequence	98093-98124	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP035381	Leclercia adecarboxylata strain R25 plasmid pLA-64, complete sequence	47432-47463	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018819	Klebsiella pneumoniae strain AR_0049 plasmid unitig_3, complete sequence	2187-2218	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP023250	Klebsiella pneumoniae strain CCUG 70742 plasmid pKpn70742_1	23405-23436	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP052417	Klebsiella pneumoniae strain C16KP0189 plasmid pC16KP0189-3, complete sequence	31224-31255	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MK648236	Klebsiella sp. strain TR5 plasmid pYK5, complete sequence	22841-22872	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040928	Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence	143256-143287	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP028993	Klebsiella pneumoniae strain AR_0142 plasmid unnamed3, complete sequence	29867-29898	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP044008	Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence	75239-75270	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029135	Klebsiella pneumoniae strain AR376 plasmid unnamed1, complete sequence	50701-50732	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	42483-42514	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	104611-104642	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP052554	Klebsiella pneumoniae strain A17KP0038 plasmid pA17KP0038-3, complete sequence	22056-22087	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021681	Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence	41601-41632	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP026200	Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence	42810-42841	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP026753	Klebsiella pneumoniae strain AR_0066 plasmid tig00000084_pilon, complete sequence	26516-26547	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021168	Enterobacter hormaechei strain 388 plasmid p388, complete sequence	74857-74888	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP045514	Salmonella enterica subsp. enterica serovar Anatum strain Sal-3948 plasmid p77k, complete sequence	69104-69135	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_LT904889	Salmonella enterica subsp. enterica serovar Typhi strain 129-0238-M genome assembly, plasmid: 2	15496-15527	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040809	Escherichia fergusonii strain EFCF056 plasmid pEF04, complete sequence	53537-53568	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040810	Escherichia fergusonii strain EFCF056 plasmid pEF05, complete sequence	77307-77338	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NC_011092	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 plasmid pCVM19633_110, complete sequence	108082-108113	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021688	Klebsiella pneumoniae strain AR_0146 plasmid tig00001189, complete sequence	62756-62787	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP047672	Edwardsiella piscicida strain CK41 plasmid pCK41, complete sequence	17765-17796	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP036311	Enterobacter hormaechei strain WCHEH090011 plasmid pCTXM65_090011, complete sequence	94154-94185	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021163	Enterobacter hormaechei strain 234 plasmid p234, complete sequence	36321-36352	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	LT009689	Klebsiella pneumoniae plasmid pIT-12C73, strain 12C73, complete sequence	96296-96327	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP042900	Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence	30764-30795	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP009116	Klebsiella pneumoniae strain carbapenem-resistant blaNDM-1 plasmid p1, complete sequence	29683-29714	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040697	Citrobacter freundii strain R47 plasmid pR47-54, complete sequence	15458-15489	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP009851	UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence	39829-39860	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP039328	Citrobacter portucalensis strain Effluent_1 plasmid unnamed1, complete sequence	82755-82786	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_AP019668	Klebsiella pneumoniae strain TA6363 plasmid pTMTA63633, complete sequence	77129-77160	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029434	Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence	15314-15345	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029428	Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence	44482-44513	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP020070	Klebsiella pneumoniae strain AR_0068 plasmid unitig_4, complete sequence	5489-5520	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP042902	Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence	67250-67281	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP028931	Klebsiella pneumoniae strain AR_0153 plasmid unnamed3, complete sequence	46733-46764	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018207	Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence	2873-2904	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP025517	Klebsiella pneumoniae strain 002SK2 plasmid p002SK2_B, complete sequence	64458-64489	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP016919	Klebsiella pneumoniae isolate 11 plasmid pIncR_DHQP1300920, complete sequence	6642-6673	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP034677	Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_80kb, complete sequence	32051-32082	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP041112	Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence	6874-6905	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP042974	Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence	100914-100945	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP022612	Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence	163928-163959	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018451	Klebsiella pneumoniae strain Kp_Goe_71070 plasmid pKp_Goe_070-1, complete sequence	6911-6942	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP040362	Klebsiella pneumoniae strain R50 plasmid pR50-74, complete sequence	66841-66872	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029723	Klebsiella pneumoniae strain AR_0140 plasmid unnamed1, complete sequence	72124-72155	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP026578	Escherichia coli strain WCHEC005237 plasmid pQnrS1_005237, complete sequence	114886-114917	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021712	Klebsiella pneumoniae strain AR_0143 plasmid tig00000857, complete sequence	33366-33397	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029860	Salmonella enterica subsp. enterica serovar Typhi strain 343077_260153 plasmid pK91, complete sequence	49315-49346	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029869	Salmonella enterica subsp. enterica serovar Typhi strain 343077_215174 plasmid pK91, complete sequence	49315-49346	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_AP018752	Klebsiella pneumoniae strain KP64 plasmid pKP6402, complete sequence	8606-8637	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP006801	Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p3, complete sequence	20773-20804	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	105818-105849	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	AP022352	Klebsiella pneumoniae E208 plasmid pE208_IMP6 DNA, complete sequence	29437-29468	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029874	Salmonella enterica subsp. enterica serovar Typhi strain 343077_211171 plasmid pK91, complete sequence	35442-35473	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021953	Klebsiella pneumoniae strain AR_0148 plasmid tig00000185_pilon, complete sequence	13980-14011	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029871	Salmonella enterica subsp. enterica serovar Typhi strain 343077_214135 plasmid pK91, complete sequence	49315-49346	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MH430882	Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP, complete sequence	35745-35776	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_AP018830	Enterobacter hormaechei subsp. xiangfangensis strain M206 plasmid pM206-NDM1, complete sequence	8606-8637	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP052479	Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-3, complete sequence	22056-22087	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP026018	Klebsiella pneumoniae strain 13190 plasmid p13190-2, complete sequence	58479-58510	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP032176	Klebsiella pneumoniae strain AR_0135 plasmid unnamed1, complete sequence	39486-39517	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029912	Salmonella enterica subsp. enterica serovar Typhi strain 343076_249107 plasmid pK91, complete sequence	49315-49346	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029963	Salmonella enterica subsp. enterica serovar Typhi strain 343078_228140 plasmid pK91, complete sequence	68599-68630	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MH430881	Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence	104013-104044	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP006662	Klebsiella pneumoniae strain ATCC BAA-2146 plasmid pHg, complete sequence	66899-66930	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	CP052471	Klebsiella pneumoniae strain C16KP0053 plasmid pC16KP0053-3, complete sequence	21421-21452	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP020344	Shigella flexneri 1a strain 0439 plasmid unnamed2, complete sequence	17800-17831	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP021734	Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence	8228-8259	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018989	Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_KPC, complete sequence	59585-59616	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_LT985234	Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence	85007-85038	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN604267	Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence	153083-153114	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN604267	Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence	154528-154559	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN604267	Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence	155973-156004	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP041086	Klebsiella pneumoniae strain Kp202 plasmid pKp202_4, complete sequence	22413-22444	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP044120	Raoultella planticola strain S25 plasmid pS25-68, complete sequence	66287-66318	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP016812	Klebsiella pneumoniae strain DHQP1002001 plasmid p_incR_DHQP1002001, complete sequence	3621-3652	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN218814	Klebsiella pneumoniae strain KB-2017-139 plasmid p101_srb, complete sequence	39568-39599	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP043007	Citrobacter portucalensis strain WCHCP085039 plasmid p1_085039, complete sequence	54002-54033	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN657241	Enterobacteriaceae bacterium strain 20-16 plasmid pCF104a-T3, complete sequence	77083-77114	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MN657243	Enterobacteriaceae bacterium strain 24-16 plasmid pEC744-T5, complete sequence	98911-98942	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_MG870194	Salmonella enterica subsp. enterica serovar London strain Sa128 plasmid pSa128, complete sequence	97457-97488	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_MG773378	Escherichia coli strain WA8 plasmid pWA8, complete sequence	35337-35368	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_MH477637	Citrobacter freundii strain 1509-02085 plasmid p02085-tetA, complete sequence	8570-8601	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018448	Klebsiella pneumoniae strain Kp_Goe_33208 plasmid pKp_Goe_208-1, complete sequence	55897-55928	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP035538	Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-3, complete sequence	48087-48118	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MG874043	Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence	64747-64778	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MG874043	Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence	66192-66223	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	MG874044	Salmonella sp. strain Sa76 plasmid pSa76-CIP, complete sequence	90614-90645	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP029440	Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence	46324-46355	0	1.0
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP018737	Klebsiella pneumoniae strain Kp_Goe_121641 plasmid pKp_Goe_641-1	44970-45001	0	1.0
NZ_CP042615_5	5.7\|4824413\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824413-4824444	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246876-246907	0	1.0
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	JQ086376	Enterobacteria phage HK630, complete genome	37489-37524	1	0.972
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_002730	Enterobacteria phage HK620, complete genome	10399-10434	1	0.972
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AF335538	Bacteriophage HK620, complete genome	10399-10434	1	0.972
NZ_CP042615_1	1.1\|951256\|38\|NZ_CP042615\|CRISPRCasFinder	951256-951293	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP042615_2	2.1\|1727398\|40\|NZ_CP042615\|CRISPRCasFinder	1727398-1727437	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	2	0.95
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NZ_CP044141	Escherichia coli O157 strain AR-0430 plasmid pAR-0430-4	12173-12208	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	MN340231	Escherichia phage phiv205-1, complete genome	35252-35287	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682385	Escherichia phage PA33, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682382	Escherichia phage PA29, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682389	Escherichia phage PA45, complete genome	14232-14267	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682383	Escherichia phage PA30, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_004914	Stx2 converting phage II DNA, complete genome	44807-44842	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682375	Escherichia phage PA11, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682387	Escherichia phage PA42, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KJ909655	Escherichia Stx1-converting recombinant phage HUN/2013, complete genome	36144-36179	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682384	Escherichia phage PA32, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682386	Escherichia phage PA36, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682376	Escherichia phage PA12, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AP000422	Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7	13473-13508	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682391	Escherichia phage PA51, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682388	Escherichia phage PA44, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_008464	Stx2-converting phage 86, complete genome	52651-52686	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682372	Escherichia phage PA4, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682377	Escherichia phage PA16, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_000902	Enterobacteria phage VT2-Sakai, complete genome	12918-12953	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AP000363	Enterobacteria phage VT2-Sakai proviral DNA, complete genome	12918-12953	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682380	Escherichia phage PA27, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AP005153	Stx1 converting phage DNA, complete genome	44807-44842	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682379	Escherichia phage PA21, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682373	Escherichia phage PA5, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AB255436	Stx2-converting phage 86 DNA, complete genome	52651-52686	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682378	Escherichia phage PA18, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682390	Escherichia phage PA50, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	KP682392	Escherichia phage PA52, complete genome	12919-12954	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_019708	Enterobacteria phage mEp235, complete genome	28862-28897	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AJ304858	Bacteriophage CP-1639 and chromosomal integration site	13418-13453	2	0.944
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	NC_002166	Bacteriophage HK022, complete genome	30451-30486	3	0.917
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	U02466	Bacteriophage HK022 (cro), (cII) and (O) genes, complete cds, (P) gene, partial cds	1258-1293	3	0.917
NZ_CP042615_3	3.1\|2022416\|36\|NZ_CP042615\|CRISPRCasFinder	2022416-2022451	36	AF069308	Escherichia virus HK022, complete genome	30451-30486	3	0.917
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	219161-219192	5	0.844
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	563095-563126	5	0.844
NZ_CP042615_5	5.4\|4824230\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824230-4824261	32	MN855767	Bacteriophage sp. isolate 11, complete genome	31880-31911	5	0.844
NZ_CP042615_5	5.5\|4824291\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824291-4824322	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	100800-100831	6	0.812
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP015989	Sphingobium sp. EP60837 plasmid pEP2, complete sequence	166686-166717	7	0.781
NZ_CP042615_5	5.4\|4824230\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824230-4824261	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	103191-103222	7	0.781
NZ_CP042615_5	5.6\|4824352\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824352-4824383	32	NZ_CP013613	Pseudoalteromonas rubra strain SCSIO 6842 plasmid pMBL6842, complete sequence	69017-69048	7	0.781
NZ_CP042615_4	4.1\|4798674\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4798674-4798705	32	LR597649	Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1	10327-10358	8	0.75
NZ_CP042615_4	4.1\|4798674\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4798674-4798705	32	NZ_CP020897	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence	14748-14779	8	0.75
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1593044-1593075	8	0.75
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	227756-227787	8	0.75
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NC_007336	Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence	254260-254291	8	0.75
NZ_CP042615_5	5.5\|4824291\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824291-4824322	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	123752-123783	8	0.75
NZ_CP042615_5	5.5\|4824291\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824291-4824322	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	136491-136522	8	0.75
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	CP049262	Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence	36752-36783	9	0.719
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	87104-87135	9	0.719
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	211180-211211	9	0.719
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	CP000663	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence	255810-255841	9	0.719
NZ_CP042615_5	5.1\|4824046\|32\|NZ_CP042615\|PILER-CR,CRISPRCasFinder,CRT	4824046-4824077	32	NZ_CP031752	Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence	253321-253352	9	0.719
NZ_CP042615_4	4.4\|4798857\|32\|NZ_CP042615\|CRISPRCasFinder,CRT	4798857-4798888	32	NC_017570	Shewanella baltica BA175 plasmid pSBAL17501, complete sequence	5394-5425	10	0.688
NZ_CP042615_4	4.4\|4798857\|32\|NZ_CP042615\|CRISPRCasFinder,CRT	4798857-4798888	32	MN855661	Bacteriophage sp. isolate 274, complete genome	1821-1852	10	0.688

1. spacer 5.4|4824230|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gtcaactggcaccacaggatgatggcggcgaa	Protospacer
********************************

2. spacer 5.5|4824291|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
caggtcgaccgactggaggcggagattgtcgg	Protospacer
********************************

3. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050835 (Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

4. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213454 (Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 plasmid 3) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

5. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU295131 (Escherichia coli strain BK28009 plasmid pBK28009, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

6. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU302802 (Enterobacter cloacae strain SZECL1 plasmid pNDM1_SZ2 clone ST231, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

7. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU302801 (Enterobacter cloacae strain SZECL1 plasmid pNDM1_SZ1 clone ST231, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

8. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ958927 (Klebsiella pneumoniae strain Kpn-3002cz plasmid pS-3002cz, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

9. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KT818627 (Klebsiella pneumoniae strain U25 plasmid U25P002, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

10. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM023153 (Escherichia coli strain PGR46 plasmid pPGRT46, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

11. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY848295 (Shigella flexneri Y strain RC960 plasmid pRC960-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

12. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025845 (Escherichia coli strain 720632 plasmid p720632_72, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

13. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP052410 (Klebsiella pneumoniae strain C17KP0008 plasmid pC17KP0008-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

14. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018755 (Klebsiella pneumoniae strain KP67 plasmid pKP6702, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

15. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT882487 (Salmonella enterica subsp. enterica serovar Typhi isolate 4714STDY6831631 plasmid 2) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

16. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046430 (Salmonella enterica strain R19.2839 plasmid pR19.2839_83k, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

17. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_010886 (Klebsiella pneumoniae plasmid pK245, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

18. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ187752 (Klebsiella pneumoniae strain 7433 plasmid pTR2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

19. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040574 (Salmonella enterica subsp. enterica serovar Typhi strain WGS1146 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

20. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to KY051550 (Escherichia coli plasmid pFZ11, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

21. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024474 (Shigella flexneri 7b strain 94-3007 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

22. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026764 (Shigella flexneri strain 04-3145 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

23. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028955 (Klebsiella pneumoniae strain AR_0141 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

24. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006642 (Escherichia coli PCN061 plasmid PCN061p6, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

25. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033627 (Klebsiella pneumoniae strain 4743 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

26. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to HG969996 (Klebsiella pneumoniae plasmid pIT-12C47, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

27. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP045558 (Citrobacter sp. S39 plasmid pS39-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

28. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020531 (Enterobacter cloacae strain 174 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

29. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_014725 (Edwardsiella tarda strain CK41 plasmid pCK41, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

30. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020856 (Klebsiella pneumoniae strain KPN528 plasmid pKPN528-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

31. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

32. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LC549808 (Klebsiella pneumoniae VNCKp83 plasmid pVNCKp83 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

33. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_019165 (Klebsiella pneumoniae plasmid pKPN101-IT, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

34. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035381 (Leclercia adecarboxylata strain R25 plasmid pLA-64, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

35. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018819 (Klebsiella pneumoniae strain AR_0049 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

36. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023250 (Klebsiella pneumoniae strain CCUG 70742 plasmid pKpn70742_1) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

37. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP052417 (Klebsiella pneumoniae strain C16KP0189 plasmid pC16KP0189-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

38. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MK648236 (Klebsiella sp. strain TR5 plasmid pYK5, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

39. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040928 (Escherichia coli strain YY76-1 plasmid pYY76-1-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

40. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028993 (Klebsiella pneumoniae strain AR_0142 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

41. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP044008 (Salmonella enterica subsp. enterica serovar Typhi strain 2018K-0756 plasmid p2018K-0756, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

42. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029135 (Klebsiella pneumoniae strain AR376 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

43. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

44. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

45. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP052554 (Klebsiella pneumoniae strain A17KP0038 plasmid pA17KP0038-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

46. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021681 (Escherichia coli strain AR_0162 plasmid tig00003056, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

47. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026200 (Escherichia coli strain ECONIH6 plasmid pECO-6dfa, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

48. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026753 (Klebsiella pneumoniae strain AR_0066 plasmid tig00000084_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

49. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021168 (Enterobacter hormaechei strain 388 plasmid p388, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

50. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045514 (Salmonella enterica subsp. enterica serovar Anatum strain Sal-3948 plasmid p77k, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

51. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT904889 (Salmonella enterica subsp. enterica serovar Typhi strain 129-0238-M genome assembly, plasmid: 2) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

52. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040809 (Escherichia fergusonii strain EFCF056 plasmid pEF04, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

53. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040810 (Escherichia fergusonii strain EFCF056 plasmid pEF05, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

54. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_011092 (Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 plasmid pCVM19633_110, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

55. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021688 (Klebsiella pneumoniae strain AR_0146 plasmid tig00001189, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

56. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP047672 (Edwardsiella piscicida strain CK41 plasmid pCK41, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

57. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036311 (Enterobacter hormaechei strain WCHEH090011 plasmid pCTXM65_090011, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

58. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021163 (Enterobacter hormaechei strain 234 plasmid p234, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

59. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LT009689 (Klebsiella pneumoniae plasmid pIT-12C73, strain 12C73, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

60. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP042900 (Escherichia coli strain CFSAN061763 plasmid pCFSAN061763, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

61. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009116 (Klebsiella pneumoniae strain carbapenem-resistant blaNDM-1 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

62. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040697 (Citrobacter freundii strain R47 plasmid pR47-54, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

63. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009851 (UNVERIFIED_ORG: Enterobacter cloacae strain ECNIH4 plasmid pENT-c88, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

64. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039328 (Citrobacter portucalensis strain Effluent_1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

65. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019668 (Klebsiella pneumoniae strain TA6363 plasmid pTMTA63633, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

66. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029434 (Klebsiella quasipneumoniae strain CAV2013 plasmid pCAV2013-61, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

67. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029428 (Klebsiella quasipneumoniae strain CAV2018 plasmid pCAV2018-51, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

68. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020070 (Klebsiella pneumoniae strain AR_0068 plasmid unitig_4, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

69. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP042902 (Escherichia coli strain CFSAN061762 plasmid pCFSAN061762, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

70. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028931 (Klebsiella pneumoniae strain AR_0153 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

71. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018207 (Escherichia coli strain MRSN346647 plasmid pMRSN346647_113.1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

72. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025517 (Klebsiella pneumoniae strain 002SK2 plasmid p002SK2_B, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

73. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016919 (Klebsiella pneumoniae isolate 11 plasmid pIncR_DHQP1300920, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

74. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034677 (Klebsiella quasipneumoniae strain D120-1 plasmid pD120-1_80kb, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

75. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041112 (Escherichia coli strain ECCTRSRTH03 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

76. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP042974 (Escherichia coli strain CFSAN061768 plasmid pCFSAN061768, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

77. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022612 (Klebsiella pneumoniae strain CDC 0106 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

78. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018451 (Klebsiella pneumoniae strain Kp_Goe_71070 plasmid pKp_Goe_070-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

79. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040362 (Klebsiella pneumoniae strain R50 plasmid pR50-74, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

80. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029723 (Klebsiella pneumoniae strain AR_0140 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

81. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026578 (Escherichia coli strain WCHEC005237 plasmid pQnrS1_005237, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

82. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021712 (Klebsiella pneumoniae strain AR_0143 plasmid tig00000857, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

83. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029860 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_260153 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

84. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029869 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_215174 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

85. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018752 (Klebsiella pneumoniae strain KP64 plasmid pKP6402, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

86. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006801 (Klebsiella pneumoniae subsp. pneumoniae PittNDM01 plasmid p3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

87. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

88. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to AP022352 (Klebsiella pneumoniae E208 plasmid pE208_IMP6 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

89. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029874 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_211171 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

90. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021953 (Klebsiella pneumoniae strain AR_0148 plasmid tig00000185_pilon, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

91. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029871 (Salmonella enterica subsp. enterica serovar Typhi strain 343077_214135 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

92. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MH430882 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

93. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018830 (Enterobacter hormaechei subsp. xiangfangensis strain M206 plasmid pM206-NDM1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

94. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP052479 (Klebsiella pneumoniae strain C16KP0050 plasmid pC16KP0050-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

95. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026018 (Klebsiella pneumoniae strain 13190 plasmid p13190-2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

96. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032176 (Klebsiella pneumoniae strain AR_0135 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

97. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029912 (Salmonella enterica subsp. enterica serovar Typhi strain 343076_249107 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

98. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029963 (Salmonella enterica subsp. enterica serovar Typhi strain 343078_228140 plasmid pK91, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

99. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MH430881 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

100. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006662 (Klebsiella pneumoniae strain ATCC BAA-2146 plasmid pHg, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

101. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP052471 (Klebsiella pneumoniae strain C16KP0053 plasmid pC16KP0053-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

102. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020344 (Shigella flexneri 1a strain 0439 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

103. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021734 (Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

104. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018989 (Escherichia coli strain Ecol_AZ146 plasmid pECAZ146_KPC, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

105. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LT985234 (Escherichia coli strain 557 plasmid RCS32TR557_p, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

106. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN604267 (Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

107. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN604267 (Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

108. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN604267 (Salmonella enterica subsp. enterica serovar London strain SAL-19-0623 plasmid pSAL-19-0623_NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

109. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041086 (Klebsiella pneumoniae strain Kp202 plasmid pKp202_4, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

110. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044120 (Raoultella planticola strain S25 plasmid pS25-68, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

111. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016812 (Klebsiella pneumoniae strain DHQP1002001 plasmid p_incR_DHQP1002001, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

112. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN218814 (Klebsiella pneumoniae strain KB-2017-139 plasmid p101_srb, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

113. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043007 (Citrobacter portucalensis strain WCHCP085039 plasmid p1_085039, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

114. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN657241 (Enterobacteriaceae bacterium strain 20-16 plasmid pCF104a-T3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

115. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN657243 (Enterobacteriaceae bacterium strain 24-16 plasmid pEC744-T5, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

116. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG870194 (Salmonella enterica subsp. enterica serovar London strain Sa128 plasmid pSa128, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

117. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG773378 (Escherichia coli strain WA8 plasmid pWA8, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

118. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH477637 (Citrobacter freundii strain 1509-02085 plasmid p02085-tetA, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

119. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018448 (Klebsiella pneumoniae strain Kp_Goe_33208 plasmid pKp_Goe_208-1, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

120. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035538 (Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-3, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

121. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MG874043 (Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

122. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MG874043 (Salmonella sp. strain Sa63 plasmid pSa63-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

123. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MG874044 (Salmonella sp. strain Sa76 plasmid pSa76-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

124. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029440 (Klebsiella quasipneumoniae strain CAV1947 plasmid pCAV1947-61, complete sequence) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

125. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018737 (Klebsiella pneumoniae strain Kp_Goe_121641 plasmid pKp_Goe_641-1) position: , mismatch: 0, identity: 1.0

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
gccgtcgtgccgtgttcacctttacgaacctg	Protospacer
********************************

126. spacer 5.7|4824413|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccagcgaaggacttgctcgtgtggttaaagcc	CRISPR spacer
ccagcgaaggacttgctcgtgtggttaaagcc	Protospacer
********************************

127. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to JQ086376 (Enterobacteria phage HK630, complete genome) position: , mismatch: 1, identity: 0.972

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacaggcattggtattgctggctttgag	Protospacer
*.**********************************

128. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_002730 (Enterobacteria phage HK620, complete genome) position: , mismatch: 1, identity: 0.972

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacaggcattggtattgctggctttgag	Protospacer
*.**********************************

129. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AF335538 (Bacteriophage HK620, complete genome) position: , mismatch: 1, identity: 0.972

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacaggcattggtattgctggctttgag	Protospacer
*.**********************************

130. spacer 1.1|951256|38|NZ_CP042615|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

131. spacer 2.1|1727398|40|NZ_CP042615|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 2, identity: 0.95

gcgctgcggatcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
*********.*****.************************

132. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NZ_CP044141 (Escherichia coli O157 strain AR-0430 plasmid pAR-0430-4) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

133. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

134. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682385 (Escherichia phage PA33, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

135. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682382 (Escherichia phage PA29, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

136. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682389 (Escherichia phage PA45, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

137. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682383 (Escherichia phage PA30, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

138. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_004914 (Stx2 converting phage II DNA, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

139. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682375 (Escherichia phage PA11, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

140. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682387 (Escherichia phage PA42, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

141. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KJ909655 (Escherichia Stx1-converting recombinant phage HUN/2013, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

142. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682384 (Escherichia phage PA32, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

143. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682386 (Escherichia phage PA36, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

144. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682376 (Escherichia phage PA12, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

145. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AP000422 (Enterobacteria phage VT2-Sakai genomic DNA, prophage inserted region in Escherichia coli O157:H7) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

146. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682391 (Escherichia phage PA51, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

147. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682388 (Escherichia phage PA44, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

148. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_008464 (Stx2-converting phage 86, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

149. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682372 (Escherichia phage PA4, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

150. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682377 (Escherichia phage PA16, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

151. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_000902 (Enterobacteria phage VT2-Sakai, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

152. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AP000363 (Enterobacteria phage VT2-Sakai proviral DNA, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

153. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682380 (Escherichia phage PA27, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

154. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AP005153 (Stx1 converting phage DNA, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

155. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682379 (Escherichia phage PA21, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

156. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682373 (Escherichia phage PA5, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

157. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AB255436 (Stx2-converting phage 86 DNA, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

158. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682378 (Escherichia phage PA18, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

159. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682390 (Escherichia phage PA50, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

160. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to KP682392 (Escherichia phage PA52, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

161. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_019708 (Enterobacteria phage mEp235, complete genome) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

162. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AJ304858 (Bacteriophage CP-1639 and chromosomal integration site) position: , mismatch: 2, identity: 0.944

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttgcaggcattggtattgctggctttgag	Protospacer
*.*******.**************************

163. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to NC_002166 (Bacteriophage HK022, complete genome) position: , mismatch: 3, identity: 0.917

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacagacattgatattgctggctttgag	Protospacer
*.***********.*****.****************

164. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to U02466 (Bacteriophage HK022 (cro), (cII) and (O) genes, complete cds, (P) gene, partial cds) position: , mismatch: 3, identity: 0.917

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacagacattgatattgctggctttgag	Protospacer
*.***********.*****.****************

165. spacer 3.1|2022416|36|NZ_CP042615|CRISPRCasFinder matches to AF069308 (Escherichia virus HK022, complete genome) position: , mismatch: 3, identity: 0.917

gcattgcttacaggcattggtattgctggctttgag	CRISPR spacer
gtattgcttacagacattgatattgctggctttgag	Protospacer
*.***********.*****.****************

166. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.844

--ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
ctggcgtac--gagctggcgcggcggatggaggc	Protospacer
  ****.**  ************** ** *****

167. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 5, identity: 0.844

-ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gggcgga-cggaggcggcgcggcgcatcgaggc	Protospacer
 **** * * *** .******************

168. spacer 5.4|4824230|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.844

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gttaactggcaccacaagatgatggcggcttc	Protospacer
**.*************.************

169. spacer 5.5|4824291|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.812

caggtcgaccgactggaggcggagattgtcgg-	CRISPR spacer
ccggtcgacccgctggaggcggaga-tgtagac	Protospacer
* ******** .************* *** *.

170. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015989 (Sphingobium sp. EP60837 plasmid pEP2, complete sequence) position: , mismatch: 7, identity: 0.781

---ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
ctccgcgta---gagctggcggggcgcagcgaggc	Protospacer
    ***.*   ********* ****** ******

171. spacer 5.4|4824230|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
atggacatgcaccagaagatgatggcggcgaa	Protospacer
.* .**  ****** *.***************

172. spacer 5.6|4824352|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013613 (Pseudoalteromonas rubra strain SCSIO 6842 plasmid pMBL6842, complete sequence) position: , mismatch: 7, identity: 0.781

gccgtcgtgccgtgttcacctttacgaacctg	CRISPR spacer
atggccatgccgggttcacctttacgaagctg	Protospacer
.. *.*.***** *************** ***

173. spacer 4.1|4798674|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to LR597649 (Escherichia phage ESSI2_ev015 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.75

gttatttaacgccgttgtgttccagactgaaa	CRISPR spacer
atcagcgcaccccgttatgttccagactgaaa	Protospacer
.*.* .  ** *****.***************

174. spacer 4.1|4798674|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020897 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5a, complete sequence) position: , mismatch: 8, identity: 0.75

gttatttaacgccgttgtgttccagactgaaa	CRISPR spacer
aatcttcttcgccgttttgttccagacggaaa	Protospacer
. * **.  ******* ********** ****

175. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
accgcaagtgagctggcgcggcgcatcctgca	Protospacer
. ****  *******************  *

176. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gcgaaagctgagcaggcgcggcgcgtcgagga	Protospacer
*  . * ****** **********.******

177. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NC_007336 (Cupriavidus pinatubonensis JMP134 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gaggtggccgagctggcgcggcgcgtggaggc	Protospacer
*. *.. *.***************.* *****

178. spacer 5.5|4824291|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. *

179. spacer 5.5|4824291|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. *

180. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP049262 (Cronobacter sakazakii strain CS-09 plasmid pCsaCS09b, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
atgctgccggagctggcgcggcgtatcgaggg	Protospacer
.   ..** **************.*******

181. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gaagagaatgagcgagcgcggcgcatcgagga	Protospacer
*. * .  ***** .****************

182. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
cacgacatcgaactggcacggcgcatcgaggc	Protospacer
 .**   ..**.*****.**************

183. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gaggttgtagagcgggcgcggcgcctcgaggc	Protospacer
*. *.  . **** ********** *******

184. spacer 5.1|4824046|32|NZ_CP042615|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 9, identity: 0.719

ggcgcacctgagctggcgcggcgcatcgaggc	CRISPR spacer
gaggttgtagagcgggcgcggcgcctcgaggc	Protospacer
*. *.  . **** ********** *******

185. spacer 4.4|4798857|32|NZ_CP042615|CRISPRCasFinder,CRT matches to NC_017570 (Shewanella baltica BA175 plasmid pSBAL17501, complete sequence) position: , mismatch: 10, identity: 0.688

gacttgttatcattttttaagttgtcgaactt	CRISPR spacer
aaaccaaactcattttttaagttatccaactt	Protospacer
.* ...   **************.** *****

186. spacer 4.4|4798857|32|NZ_CP042615|CRISPRCasFinder,CRT matches to MN855661 (Bacteriophage sp. isolate 274, complete genome) position: , mismatch: 10, identity: 0.688

gacttgttatcattttttaagttgtcgaactt	CRISPR spacer
ctgcttttatcattttttaacgtgtcgaaagc	Protospacer
   .* **************  *******  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

375305 : 469980

Escherichia_phage(40.0%)

lysis,capsid,tRNA,tail,plate,integrase,terminase,portal,holin

attL 439460:439487|attR 471546:471573

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000968208.1\|375305_376001_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_001295452.1\|375997_376396_-	hypothetical protein	NA	NA	NA	NA
WP_151293678.1\|376634_377582_+\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
WP_000691708.1\|377954_378038_-	protein YohP	NA	NA	NA	NA
WP_151293679.1\|378261_379698_+	multidrug resistance outer membrane protein MdtQ	NA	NA	NA	NA
WP_151293680.1\|379750_380512_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001295454.1\|381388_381976_+	YIP1 family protein	NA	NA	NA	NA
WP_000097369.1\|383119_384835_-	D-lactate dehydrogenase	NA	NA	NA	NA
WP_151293681.1\|385030_387328_+	beta-glucosidase BglX	NA	NA	NA	NA
WP_151293682.1\|387476_388394_+	glycine betaine ABC transporter substrate-binding protein OsmF	NA	NA	NA	NA
WP_151293683.1\|388400_389558_+	glycine betaine ABC transporter permease YehY	NA	NA	NA	NA
WP_000569342.1\|389550_390477_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8
WP_000783137.1\|390481_391213_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|391193_391301_-	protein YohO	NA	NA	NA	NA
WP_151293684.1\|391360_392092_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	8.2e-111	98.5
WP_001295430.1\|394762_395233_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001295429.1\|395274_395736_-	DUF1307 domain-containing protein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_151293685.1\|395860_397861_-	dipeptidase	Q9EYF6	Enterobacteria_phage	0.0e+00	96.4
WP_096251368.1\|397857_398994_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	7.2e-162	97.1
WP_151293686.1\|400491_400962_-	hypothetical protein	NA	NA	NA	NA
WP_151293687.1\|401275_402364_-	MoxR family ATPase	NA	NA	NA	NA
WP_001559439.1\|402938_403244_-	hypothetical protein	NA	NA	NA	NA
WP_151293688.1\|413023_414133_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_001308761.1\|414395_414677_+	YehE family protein	NA	NA	NA	NA
WP_000830475.1\|414971_415514_+	fimbrial protein	NA	NA	NA	NA
WP_096251657.1\|415595_416270_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_151293689.1\|419897_420236_-	Ni(II)/Co(II) efflux transporter accessory subunit RcnB	NA	NA	NA	NA
WP_096251654.1\|420454_421279_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_000019944.1\|421399_421672_+	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_151293690.1\|422680_423481_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_096251652.1\|423545_424364_+	glycosyl hydrolase 25 family protein	D0R7H8	Paenibacillus_phage	2.3e-24	38.9
WP_000434044.1\|424415_425162_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_042097399.1\|426095_427100_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	5.8e-14	29.4
WP_151293691.1\|427096_428374_-	MFS transporter	NA	NA	NA	NA
WP_096251648.1\|430792_432055_+	tagatose-bisphosphate aldolase subunit GatZ	NA	NA	NA	NA
WP_000823282.1\|432546_432831_+	PTS galactitol transporter subunit IIB	NA	NA	NA	NA
WP_151293692.1\|432834_434190_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_151293693.1\|435377_436157_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
439460:439487	attL	NA	NA	NA	NA
WP_000985256.1\|439566_440580_-\|integrase	site-specific integrase	Q83VS6	Escherichia_phage	1.4e-193	99.1
WP_001306384.1\|440695_440995_-	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	2.5e-50	100.0
WP_000043869.1\|441109_441385_+	hypothetical protein	Q1JS62	Enterobacteria_phage	1.3e-48	100.0
WP_000217679.1\|441564_442065_+	hypothetical protein	S4TTB7	Salmonella_phage	1.0e-91	100.0
WP_000557703.1\|442128_442353_+	DUF2732 family protein	S4TP68	Salmonella_phage	4.7e-33	100.0
WP_001277961.1\|442352_442655_+	hypothetical protein	Q7Y4C1	Escherichia_virus	3.8e-46	99.0
WP_001113264.1\|442654_442879_+	TraR/DksA family transcriptional regulator	S4TRY6	Salmonella_phage	2.9e-35	100.0
WP_000027668.1\|442875_443151_+	hypothetical protein	U5N3W1	Enterobacteria_phage	6.6e-45	98.9
WP_096252005.1\|443140_445426_+	replication endonuclease	Q858T4	Yersinia_virus	0.0e+00	98.2
WP_096252006.1\|445425_445869_+	DUF3850 domain-containing protein	Q2P9X4	Enterobacteria_phage	4.1e-73	91.1
WP_151293694.1\|446022_446784_-	hypothetical protein	P79670	Escherichia_phage	3.5e-112	82.2
WP_096251702.1\|448892_449132_+	hypothetical protein	M1TAP7	Escherichia_phage	1.3e-12	82.0
WP_000038182.1\|449108_450143_-\|portal	phage portal protein	Q858W8	Yersinia_virus	2.4e-201	99.7
WP_097335615.1\|450142_451915_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	0.0e+00	99.8
WP_001248551.1\|453001_454075_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	1.1e-201	99.7
WP_000203434.1\|454078_454822_+\|terminase	terminase endonuclease subunit	Q858W5	Yersinia_virus	3.6e-122	96.4
WP_000846409.1\|455428_455632_+\|tail	tail protein X	A0A0F7LCN2	Escherichia_phage	3.0e-31	100.0
WP_000123124.1\|455635_455917_+\|holin	holin	A0A0F7LDF8	Escherichia_phage	3.7e-43	100.0
WP_096251703.1\|455916_456414_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	5.8e-92	98.8
WP_151293695.1\|456428_456854_+	protein lysA	A0A0F7LBP4	Escherichia_phage	4.4e-56	94.3
WP_096251705.1\|456841_457267_+\|lysis	LysB family phage lysis regulatory protein	A0A0F7L9Y0	Escherichia_phage	3.6e-66	97.2
WP_001440152.1\|457238_457412_+	hypothetical protein	Q7Y4E1	Escherichia_virus	2.3e-24	96.5
WP_000917171.1\|457374_457842_+\|tail	phage tail protein	Q7Y4E0	Escherichia_virus	7.4e-81	98.1
WP_063118410.1\|458352_458988_+\|plate	phage baseplate assembly protein V	A0A0F7LDY9	Escherichia_phage	1.5e-113	98.6
WP_001393127.1\|458984_459332_+	lysozyme family protein	A0A0F7LDQ1	Escherichia_phage	2.2e-58	98.3
WP_001121485.1\|459336_460245_+\|plate	baseplate assembly protein	Q858V6	Yersinia_virus	1.2e-162	99.7
WP_069904677.1\|460237_460768_+\|tail	phage tail protein I	A0A0F7LDF3	Escherichia_phage	8.6e-102	98.9
WP_021517188.1\|463098_463626_+\|tail	tail fiber assembly protein	U5N0T1	Enterobacteria_phage	1.4e-91	95.4
WP_001251408.1\|466043_466562_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	1.4e-93	100.0
WP_151293696.1\|466619_466895_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.8e-39	97.8
WP_000785970.1\|466927_467047_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	1.0e-15	100.0
WP_000978903.1\|469500_469980_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	9.6e-84	98.1
471546:471573	attR	NA	NA	NA	NA

DBSCAN-SWA_2

618578 : 628093

Escherichia_phage(54.55%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001315544.1\|618578_618734_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	4.0e-07	53.2
WP_000787424.1\|618936_619344_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	1.7e-28	49.6
WP_000912290.1\|619420_619648_+	transcriptional regulator	NA	NA	NA	NA
WP_151293716.1\|620154_621195_+	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.7e-85	84.0
WP_024189964.1\|621226_621649_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-77	98.6
WP_151293717.1\|621833_622442_+	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.5e-86	85.6
WP_151293718.1\|623240_624014_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_122997306.1\|624496_624616_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	2.1e-08	96.6
WP_063102597.1\|624660_624873_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.6e-29	94.3
WP_000980984.1\|625089_625341_+	hypothetical protein	NA	NA	NA	NA
WP_032194507.1\|625407_625686_+	hypothetical protein	I6PCV7	Cronobacter_phage	4.8e-11	46.9
WP_001409109.1\|625687_626746_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.4e-88	47.7
WP_099481749.1\|626746_627085_+	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.9e-35	66.3
WP_000917767.1\|627895_628093_+	hypothetical protein	Q9MC00	Enterobacteria_phage	2.1e-29	100.0

DBSCAN-SWA_3

1043581 : 1141885

Enterobacteria_phage(37.21%)

protease,tail,integrase,transposase,portal,holin

attL 1032394:1032410|attR 1064826:1064842

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1032394:1032410	attL	NA	NA	NA	NA
WP_096251744.1\|1043581_1044601_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	7.4e-17	26.2
WP_001389342.1\|1044658_1044787_+	hypothetical protein	NA	NA	NA	NA
WP_151293810.1\|1044788_1046069_-\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	1.5e-155	62.3
WP_122989168.1\|1046103_1046340_-	excisionase family protein	S4TND0	Salmonella_phage	1.8e-14	49.3
WP_151293811.1\|1046427_1048899_-	exonuclease	A0A192Y6E0	Salmonella_phage	2.7e-57	55.6
WP_001083276.1\|1048992_1049184_-	DUF1482 family protein	NA	NA	NA	NA
WP_000854559.1\|1049180_1049369_-	cell division inhibition protein DicB	NA	NA	NA	NA
WP_151293812.1\|1049855_1050431_-	hypothetical protein	NA	NA	NA	NA
WP_000379589.1\|1050432_1050588_-	DUF1391 domain-containing protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_001003381.1\|1050780_1051188_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.5e-24	46.2
WP_000476993.1\|1051265_1051493_+	transcriptional regulator	NA	NA	NA	NA
WP_001375679.1\|1051537_1051999_+	hypothetical protein	NA	NA	NA	NA
WP_151293813.1\|1051979_1052945_+	hypothetical protein	U5P0A0	Shigella_phage	1.8e-52	60.0
WP_001151189.1\|1052985_1053387_+	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	2.4e-64	95.5
WP_096252019.1\|1053821_1055171_-	hypothetical protein	A0A1W6JNS5	Morganella_phage	1.5e-259	98.0
WP_001328008.1\|1055495_1055699_+	hypothetical protein	NA	NA	NA	NA
WP_001546200.1\|1055705_1055813_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	2.5e-08	96.6
WP_000887491.1\|1055857_1056070_+	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	1.7e-29	97.1
WP_151293814.1\|1056286_1056538_+	hypothetical protein	NA	NA	NA	NA
WP_012775982.1\|1056604_1056883_+	hypothetical protein	I6PCV7	Cronobacter_phage	5.7e-12	48.4
WP_096251138.1\|1056884_1057898_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-105	55.5
WP_085947598.1\|1057911_1059074_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
WP_001204787.1\|1059213_1059591_+	antitermination protein	Q777W5	Enterobacteria_phage	1.8e-53	82.5
WP_000780584.1\|1059746_1060271_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.0e-46	52.9
WP_032201951.1\|1061829_1062543_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000839588.1\|1062732_1062948_+\|holin	holin	A5LH82	Enterobacteria_phage	1.2e-30	91.5
WP_151293815.1\|1062952_1063504_+	DUF1327 domain-containing protein	Q08JA0	Stx2-converting_phage	2.9e-36	51.1
WP_001557934.1\|1063451_1063712_-	hypothetical protein	NA	NA	NA	NA
WP_001101173.1\|1063825_1064359_+	lysozyme	K7PLY1	Enterobacteria_phage	1.4e-96	93.8
WP_000066495.1\|1065217_1065430_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
1064826:1064842	attR	NA	NA	NA	NA
WP_071528545.1\|1065440_1065629_+	cold-shock protein	NA	NA	NA	NA
WP_001443523.1\|1065776_1065932_+	hypothetical protein	NA	NA	NA	NA
WP_001019207.1\|1066104_1066278_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_151293816.1\|1066628_1066778_+	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	1.5e-16	89.8
WP_000421823.1\|1067328_1067868_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	1.8e-94	99.4
WP_001072975.1\|1069970_1070183_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_151293817.1\|1070182_1071691_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	1.6e-286	99.2
WP_151293818.1\|1071635_1073663_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.1
WP_001097045.1\|1073748_1074072_+	DUF2190 family protein	K7PLV6	Enterobacteria_phage	8.5e-52	100.0
WP_001283153.1\|1074064_1074340_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_151295252.1\|1076151_1076538_+\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	1.6e-65	99.2
WP_001161009.1\|1076546_1076876_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_000447256.1\|1079901_1080231_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.9e-60	99.1
WP_151293819.1\|1080240_1080939_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	4.4e-130	97.0
WP_151293820.1\|1081583_1082231_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.5e-111	96.3
WP_151293821.1\|1082257_1082617_-	superoxide dismutase	NA	NA	NA	NA
WP_000654143.1\|1088140_1088422_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.6e-17	47.8
WP_151293822.1\|1088431_1089472_+\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	1.2e-123	67.0
WP_000355601.1\|1089514_1089808_+	hypothetical protein	NA	NA	NA	NA
WP_096252091.1\|1090035_1090626_-	recombinase family protein	A0A219Y912	Aeromonas_phage	4.0e-23	35.9
WP_042966590.1\|1090942_1091176_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.9e-32	87.0
WP_120795384.1\|1091244_1091358_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_096251989.1\|1093332_1094793_+	mannitol dehydrogenase family protein	G8DCZ3	Micromonas_pusilla_virus	5.1e-43	29.4
WP_000214712.1\|1094828_1095032_-	putative selenium delivery protein YdfZ	J9Q802	Salmonella_phage	1.6e-11	55.2
WP_151293823.1\|1095207_1095894_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_151293824.1\|1095982_1096729_-	bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG	NA	NA	NA	NA
WP_151293825.1\|1096865_1098911_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA
WP_096252022.1\|1099274_1099667_+	YdeI family stress tolerance OB fold protein	NA	NA	NA	NA
WP_151293826.1\|1099921_1100812_+	diguanylate cyclase DgcZ	A0A127AWB9	Bacillus_phage	1.5e-18	36.4
WP_000901367.1\|1101030_1101126_-	protein MgtS	NA	NA	NA	NA
WP_059328086.1\|1101252_1102440_-	efflux MFS transporter YdeE	NA	NA	NA	NA
WP_151293827.1\|1102634_1103534_+	O-acetylserine/cysteine exporter	NA	NA	NA	NA
WP_151293828.1\|1103578_1104049_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_151292997.1\|1104045_1104276_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000722571.1\|1104474_1104786_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_151293829.1\|1108311_1109751_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.6e-28	26.7
WP_000803518.1\|1109807_1110026_-	multiple antibiotic resistance protein MarB	NA	NA	NA	NA
WP_000091199.1\|1110057_1110441_-	MDR efflux pump AcrAB transcriptional activator MarA	D0R0F8	Streptococcus_phage	4.7e-09	32.3
WP_151293830.1\|1110460_1110895_-	multiple antibiotic resistance transcriptional regulator MarR	NA	NA	NA	NA
WP_151293831.1\|1111107_1111773_+	MarC family NAAT transporter	NA	NA	NA	NA
WP_000210785.1\|1111797_1112988_-	L-arabinose MFS transporter	NA	NA	NA	NA
WP_151293832.1\|1113138_1114254_-	putative protein YneK	NA	NA	NA	NA
WP_000366507.1\|1114337_1115213_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_096251301.1\|1116762_1117689_+	glutaminase B	NA	NA	NA	NA
WP_001191032.1\|1117688_1118048_+	DUF4186 domain-containing protein	NA	NA	NA	NA
WP_096251298.1\|1121476_1122391_+	hypothetical protein	NA	NA	NA	NA
WP_000774178.1\|1123521_1124397_-	3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA	NA	NA	NA
WP_151293833.1\|1124423_1125446_-	autoinducer 2 ABC transporter substrate-binding protein LsrB	NA	NA	NA	NA
WP_001222721.1\|1125457_1126450_-	autoinducer 2 ABC transporter permease LsrD	NA	NA	NA	NA
WP_001551132.1\|1126449_1127478_-	autoinducer 2 ABC transporter permease LsrC	NA	NA	NA	NA
WP_151293834.1\|1127471_1127735_-	ribonucleotide-diphosphate reductase subunit alpha	A0A2H4PQG7	Staphylococcus_phage	1.7e-05	27.5
WP_151293835.1\|1138304_1139627_+	type II toxin-antitoxin system serine/threonine protein kinase toxin HipA	NA	NA	NA	NA
WP_151295253.1\|1139820_1140453_+	hypothetical protein	NA	NA	NA	NA
WP_151293836.1\|1140481_1141885_-\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1339047 : 1354295

Escherichia_phage(60.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151293876.1\|1339047_1339305_-	hypothetical protein	A0A1B1INL5	uncultured_Mediterranean_phage	4.9e-18	57.7
WP_151293877.1\|1339301_1339589_-	hypothetical protein	K4HZA5	Acidithiobacillus_phage	7.4e-07	54.5
WP_151293878.1\|1339557_1339833_-	hypothetical protein	A0A0R6PD10	Moraxella_phage	1.9e-20	54.9
WP_001305859.1\|1340141_1340255_-	hypothetical protein	A0A2L1IV24	Escherichia_phage	2.5e-11	89.2
WP_096251529.1\|1340474_1341020_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	2.1e-90	85.6
WP_096251547.1\|1341288_1341681_-\|holin	holin	Q8W636	Enterobacteria_phage	6.5e-54	96.2
WP_151293879.1\|1341954_1342266_-	hypothetical protein	NA	NA	NA	NA
WP_096252102.1\|1343764_1344364_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	1.9e-105	91.0
WP_151293880.1\|1347019_1348174_-	AAA family ATPase	A0A2H4UTU5	Bodo_saltans_virus	1.9e-13	31.3
WP_071998695.1\|1348149_1348371_-	hypothetical protein	NA	NA	NA	NA
WP_096251802.1\|1348367_1348799_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.6e-61	89.1
WP_151293881.1\|1348814_1349423_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.1e-87	85.1
WP_151293882.1\|1349597_1350344_-	DNA replication protein DnaC	V5UQI5	Shigella_phage	4.5e-112	79.3
WP_069903275.1\|1351633_1351888_-	hypothetical protein	A0A2I6PIE5	Escherichia_phage	1.3e-18	61.6
WP_000233320.1\|1351967_1352387_+	helix-turn-helix domain-containing protein	A0A2I6PIE7	Escherichia_phage	4.2e-19	47.5
WP_000233807.1\|1352675_1352810_+	hypothetical protein	NA	NA	NA	NA
WP_001312793.1\|1352973_1353462_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|1353903_1354125_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001352098.1\|1354124_1354295_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4

DBSCAN-SWA_5

1947129 : 2032466

Enterobacteria_phage(41.94%)

coat,integrase,terminase,head,transposase,portal,holin

attL 1949286:1949301|attR 2044335:2044350

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039026397.1\|1947129_1947951_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_000100800.1\|1948088_1948592_+	DNA starvation/stationary phase protection protein Dps	A0A222YYG6	Streptomyces_phage	4.9e-06	29.0
WP_151293990.1\|1948995_1949742_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA
1949286:1949301	attL	NA	NA	NA	NA
WP_151293991.1\|1949881_1950541_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA
WP_151293992.1\|1950537_1951260_+	glutamine ABC transporter ATP-binding protein GlnQ	G9BWD6	Planktothrix_phage	7.3e-35	41.3
WP_151293993.1\|1954795_1955056_+	DUF1471 domain-containing protein	A0A1B2ICL8	Erwinia_phage	1.6e-05	51.0
WP_096251718.1\|1955320_1957603_+	catecholate siderophore receptor Fiu	NA	NA	NA	NA
WP_000990177.1\|1957644_1958322_+	PKHD-type hydroxylase YbiX	Q5GQB0	Synechococcus_phage	1.2e-18	30.1
WP_000146357.1\|1958395_1958662_+	C4-type zinc finger protein YbiI	E5G6L7	Salmonella_phage	3.1e-07	45.6
WP_096251717.1\|1960641_1961604_-	DNA-binding protein YbiB	NA	NA	NA	NA
WP_096251716.1\|1961631_1963782_-	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	6.3e-42	26.8
WP_151293994.1\|1969765_1970437_+	DNA-binding transcriptional regulator CecR	NA	NA	NA	NA
WP_151293995.1\|1971426_1973163_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.3e-18	29.8
WP_151293996.1\|1973155_1974289_+	ABC transporter permease	NA	NA	NA	NA
WP_000871982.1\|1975368_1975779_-	hypothetical protein	NA	NA	NA	NA
WP_096251881.1\|1975911_1976673_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_151293997.1\|1976669_1977911_+	cardiolipin synthase ClsB	NA	NA	NA	NA
WP_151293998.1\|1977910_1978867_+	UPF0104 family protein	NA	NA	NA	NA
WP_151294000.1\|1978902_1979292_-	hypothetical protein	NA	NA	NA	NA
WP_000373624.1\|1979495_1980200_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_000852278.1\|1980336_1980789_-	molybdopterin synthase catalytic subunit MoaE	NA	NA	NA	NA
WP_001208766.1\|1980790_1981009_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA
WP_001295301.1\|1982046_1983036_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_151294002.1\|1983431_1984340_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.1e-27	31.1
WP_000042533.1\|1984377_1986399_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_151294004.1\|1988387_1989542_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA
WP_151294006.1\|1989538_1990579_-	biotin synthase BioB	NA	NA	NA	NA
WP_000767411.1\|1992014_1992491_+	kinase inhibitor	NA	NA	NA	NA
WP_151295262.1\|1992741_1993041_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_001210981.1\|1996534_1996756_-	hypothetical protein	I6RSG6	Salmonella_phage	1.9e-34	100.0
WP_001161119.1\|1996752_1996911_-	Arc family DNA-binding protein	I6S1K8	Salmonella_phage	7.6e-22	100.0
WP_052869845.1\|1996998_1997253_+	Arc family DNA-binding protein	E7C9U8	Salmonella_phage	7.7e-24	68.4
WP_000820796.1\|1997249_1997567_+	hypothetical protein	NA	NA	NA	NA
WP_000151196.1\|1997576_1997762_-	hypothetical protein	I6RSG3	Salmonella_phage	1.1e-08	100.0
WP_000454769.1\|1997903_1998107_+	hypothetical protein	NA	NA	NA	NA
WP_000091997.1\|1998150_1998573_-	hypothetical protein	I6S1K6	Salmonella_phage	1.2e-32	57.7
WP_151294007.1\|1999397_1999787_+	hypothetical protein	I6S5X4	Salmonella_phage	1.3e-67	98.4
WP_151294010.1\|2003117_2003810_-	DNA transfer protein	A0A2H4FUQ9	Salmonella_phage	3.6e-116	98.3
WP_151294012.1\|2003812_2004268_-	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	3.3e-86	98.0
WP_151294014.1\|2004267_2005221_-	hypothetical protein	Q716G6	Shigella_phage	1.6e-93	84.5
WP_151294016.1\|2005220_2006639_-	hypothetical protein	A0A088CQ70	Enterobacteria_phage	1.5e-273	98.9
WP_001140510.1\|2006648_2007110_-\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
WP_151294018.1\|2007321_2008575_-\|coat	coat protein	A5VW72	Enterobacteria_phage	8.3e-236	99.3
WP_151294020.1\|2008593_2009487_-	scaffolding protein	A0A088CPT0	Enterobacteria_phage	1.0e-123	90.2
WP_151295263.1\|2009577_2011779_-\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	96.6
WP_001549451.1\|2011778_2013275_-\|terminase	large terminase	A0A2D1GLW6	Escherichia_phage	8.2e-283	93.8
WP_000729920.1\|2013252_2013741_-	hypothetical protein	G8EYI7	Enterobacteria_phage	1.4e-90	100.0
WP_000807792.1\|2013776_2014019_-	DUF2560 family protein	A5VW77	Enterobacteria_phage	2.9e-36	98.8
WP_001059339.1\|2014319_2014844_-	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	4.5e-87	94.2
WP_001139676.1\|2015045_2015198_-	hypothetical protein	A0A088CQ22	Enterobacteria_phage	1.2e-21	100.0
WP_151294022.1\|2015226_2015433_-	hypothetical protein	H6WRZ6	Salmonella_phage	7.1e-28	92.6
WP_151294024.1\|2015649_2016126_-	glycoside hydrolase family protein	A5VW81	Enterobacteria_phage	2.2e-88	99.4
WP_000783734.1\|2016109_2016433_-\|holin	phage holin, lambda family	G5DA93	Enterobacteria_phage	1.3e-52	100.0
WP_016063210.1\|2017404_2017599_-	NinH protein	K7PMJ0	Enterobacteria_phage	6.0e-29	100.0
WP_151294026.1\|2017595_2017958_-	RusA family crossover junction endodeoxyribonuclease	K7P6I9	Enterobacteria_phage	2.3e-61	98.3
WP_000002244.1\|2017954_2018245_-	DUF1364 domain-containing protein	A0A192Y6R9	Salmonella_phage	1.0e-51	100.0
WP_151294028.1\|2018244_2018967_-	DNA-binding protein	A5VW87	Enterobacteria_phage	2.1e-127	96.7
WP_000566866.1\|2018959_2019130_-	protein ninF	K7PLU6	Enterobacteria_phage	2.5e-26	100.0
WP_001254257.1\|2019126_2019309_-	NinE family protein	A0A0P0ZC71	Stx2-converting_phage	4.3e-29	100.0
WP_096251958.1\|2019305_2019833_-	phage N-6-adenine-methyltransferase	K7PJZ4	Enterobacterial_phage	2.1e-100	99.4
WP_151294031.1\|2019829_2020270_-	recombination protein NinB	M1FPM8	Enterobacteria_phage	5.9e-80	99.3
WP_096251957.1\|2020250_2020463_-	hypothetical protein	A0A1V0E5J7	Salmonella_phage	1.8e-34	97.1
WP_000158285.1\|2020449_2020548_-	hypothetical protein	Q9MCP6	Enterobacteria_phage	7.5e-12	100.0
WP_000131492.1\|2020547_2021984_-	AAA family ATPase	Q8VNP7	Enterobacteria_phage	6.1e-275	100.0
WP_151294033.1\|2021973_2022873_-	DNA replication protein	A0A0N7C1Z7	Escherichia_phage	5.1e-163	99.0
WP_000166207.1\|2022865_2023012_-	DUF2740 domain-containing protein	Q687G5	Enterobacteria_phage	1.1e-19	100.0
WP_033546449.1\|2023044_2023338_-	hypothetical protein	K7P6Y2	Enterobacteria_phage	1.4e-45	99.0
WP_001054987.1\|2023447_2023672_-	helix-turn-helix domain-containing protein	A0A0N7C1T6	Escherichia_phage	1.4e-29	86.3
WP_000092875.1\|2023816_2024491_+	helix-turn-helix transcriptional regulator	A0A0N7C1P9	Escherichia_phage	5.3e-104	84.4
WP_000394871.1\|2024531_2024828_+	hypothetical protein	NA	NA	NA	NA
WP_151294035.1\|2025261_2025534_+	hypothetical protein	K7PH69	Enterobacterial_phage	2.0e-25	94.4
WP_021549877.1\|2025592_2025781_+	hypothetical protein	K7PMF8	Enterobacteria_phage	1.1e-16	90.9
WP_000167595.1\|2025859_2026330_+	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.7e-88	100.0
WP_014532157.1\|2026419_2026695_+	hypothetical protein	K7PGS9	Enterobacteria_phage	5.9e-46	98.9
WP_151294037.1\|2026951_2027557_+	recombinase	Q9MCQ9	Enterobacteria_phage	4.6e-107	99.0
WP_096251947.1\|2027556_2027940_+	hypothetical protein	A0A2I6PID1	Escherichia_phage	1.9e-66	98.4
WP_047668784.1\|2027963_2028260_+	DUF2856 family protein	A5VWB0	Enterobacteria_phage	5.0e-51	98.0
WP_096251948.1\|2028430_2028961_+	hypothetical protein	Q9MCR3	Enterobacteria_phage	2.2e-44	64.4
WP_096251949.1\|2028957_2029272_+	hypothetical protein	B1GS43	Salmonella_phage	8.9e-38	83.9
WP_052433760.1\|2029258_2029660_+	ead/Ea22-like family protein	A0A077SLK5	Escherichia_phage	3.5e-31	50.5
WP_024187529.1\|2029656_2029980_+	carboxylate--amine ligase	A0A222YZB4	Escherichia_phage	1.9e-43	89.2
WP_151294039.1\|2029976_2030636_+	hypothetical protein	A0A2I6TCG8	Escherichia_phage	2.5e-34	82.1
WP_096251950.1\|2030635_2030920_+	ASCH domain-containing protein	A0A2D1GLL3	Escherichia_phage	3.5e-49	96.8
WP_001593197.1\|2030992_2031160_+	hypothetical protein	K7P728	Enterobacteria_phage	3.7e-27	98.2
WP_001303849.1\|2031199_2031418_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_151294041.1\|2031395_2032466_+\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	2.1e-200	99.2
2044335:2044350	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2852461 : 3012120

114

Enterobacteria_phage(40.43%)

protease,tRNA,tail,transposase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151294361.1\|2852461_2853916_-\|tRNA	class I tRNA ligase family protein	A0A2P1ELB8	Moumouvirus	8.6e-27	27.3
WP_151294363.1\|2853801_2855277_-\|tRNA	class I tRNA ligase family protein	A0A1V0SJ93	Klosneuvirus	6.9e-40	25.5
WP_000767329.1\|2855319_2856261_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA
WP_001300728.1\|2856268_2856487_-	DUF2575 domain-containing protein	NA	NA	NA	NA
WP_001274021.1\|2856589_2856853_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_151294365.1\|2857336_2858779_+	type III secretion system effector EspX1	NA	NA	NA	NA
WP_000759929.1\|2859835_2860369_+	fimbrial protein	NA	NA	NA	NA
WP_001306194.1\|2860418_2861102_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_151294367.1\|2866954_2868199_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_151294369.1\|2869641_2869821_-	hypothetical protein	NA	NA	NA	NA
WP_033870199.1\|2869840_2870602_-	membrane protein	NA	NA	NA	NA
WP_001181672.1\|2871158_2871368_+	type I toxin-antitoxin system toxin MokC	A0A0P0ZAX5	Stx2-converting_phage	5.2e-18	72.5
WP_000843579.1\|2874983_2875388_+	DUF2541 family protein	NA	NA	NA	NA
WP_151294371.1\|2875413_2876127_+	acidic protein MsyB	NA	NA	NA	NA
WP_000528541.1\|2876275_2876842_+	acetate uptake transporter	NA	NA	NA	NA
WP_001600972.1\|2876876_2877464_-	molybdopterin adenylyltransferase	NA	NA	NA	NA
WP_000906178.1\|2880310_2881087_+	peroxide stress protein YaaA	NA	NA	NA	NA
WP_151294373.1\|2881126_2881423_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_151294375.1\|2881637_2882924_-	threonine synthase	NA	NA	NA	NA
WP_001386572.1\|2886402_2886468_-	thr operon leader peptide	NA	NA	NA	NA
WP_151294377.1\|2886680_2887367_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001303782.1\|2887766_2887907_-	hypothetical protein	NA	NA	NA	NA
WP_151294379.1\|2888002_2888719_+	two-component system response regulator ArcA	NA	NA	NA	NA
WP_000920350.1\|2888778_2890131_-	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_151294381.1\|2891611_2892301_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	1.4e-27	33.9
WP_151294383.1\|2892313_2892787_-	protein CreA	NA	NA	NA	NA
WP_151294385.1\|2892997_2893867_+	MDR efflux pump AcrAB transcriptional activator RobA	NA	NA	NA	NA
WP_000942344.1\|2893863_2894511_-	phosphoglycerate mutase GpmB	NA	NA	NA	NA
WP_151294387.1\|2894562_2895078_+	non-canonical purine NTP phosphatase	NA	NA	NA	NA
WP_000068678.1\|2895071_2895398_-	trp operon repressor	NA	NA	NA	NA
WP_151294388.1\|2901507_2902305_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_151294390.1\|2902330_2902747_+	SRPBCC family protein	NA	NA	NA	NA
WP_000848792.1\|2902904_2903117_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_071779356.1\|2903165_2903351_+	hypothetical protein	NA	NA	NA	NA
WP_151294392.1\|2904831_2906214_-	DNA repair protein RadA	NA	NA	NA	NA
WP_001577677.1\|2907335_2907977_+	YtjB family periplasmic protein	NA	NA	NA	NA
WP_151294394.1\|2909051_2909315_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000224877.1\|2909475_2910195_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_000477811.1\|2911526_2912849_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-79	39.8
WP_001295412.1\|2912926_2913706_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_151294396.1\|2913963_2915514_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_096251787.1\|2916381_2917161_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_151294398.1\|2917157_2918231_-	patatin family protein	NA	NA	NA	NA
WP_000490275.1\|2918352_2918514_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2
WP_151294400.1\|2918640_2919246_-	molecular chaperone OsmY	NA	NA	NA	NA
WP_061335757.1\|2922193_2924077_+	AAA family ATPase	NA	NA	NA	NA
WP_151294402.1\|2924552_2924846_-	hypothetical protein	NA	NA	NA	NA
WP_096252090.1\|2924871_2925561_-	chaperone of endosialidase	A0A1X7QGH6	Escherichia_phage	1.2e-58	61.7
WP_061158085.1\|2925570_2925852_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	6.3e-19	51.1
WP_151294404.1\|2925851_2928224_-\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	1.4e-167	69.3
WP_151294406.1\|2931742_2932375_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.1e-93	88.6
WP_151294408.1\|2932311_2933055_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.3e-148	96.8
WP_001152632.1\|2933060_2933759_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	9.5e-133	99.1
WP_000847321.1\|2933758_2934088_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	8.9e-57	97.2
WP_151294410.1\|2935204_2935555_-\|tail	phage tail tape measure protein	A5LH38	Enterobacteria_phage	1.2e-11	60.3
WP_001161009.1\|2937129_2937459_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_151295269.1\|2937467_2937854_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.8e-65	99.2
WP_151294412.1\|2937914_2938658_-\|tail	phage tail protein	A5LH35	Enterobacteria_phage	3.5e-133	99.6
WP_054575898.1\|2939666_2939942_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	6.6e-45	98.9
WP_001097050.1\|2939934_2940258_-	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_151294414.1\|2940344_2942372_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.4
WP_001072975.1\|2943823_2944036_-	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_151294416.1\|2945927_2946137_-	hypothetical protein	K7PH40	Enterobacteria_phage	2.1e-27	100.0
WP_000373425.1\|2946136_2946631_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_000745291.1\|2947016_2947208_+	hypothetical protein	NA	NA	NA	NA
WP_001680321.1\|2947338_2947491_-	hypothetical protein	K7PKL2	Enterobacteria_phage	6.8e-20	94.0
WP_000092310.1\|2947478_2947916_-\|lysis	lysis protein	Q716B4	Shigella_phage	2.5e-70	97.9
WP_000839561.1\|2948410_2948626_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	5.9e-33	95.8
WP_000115362.1\|2949440_2949866_-	hypothetical protein	A0A291AWZ9	Escherichia_phage	1.0e-73	98.6
WP_151294418.1\|2950147_2950900_-	antitermination protein	K7PGU5	Enterobacteria_phage	3.5e-133	96.8
WP_014639527.1\|2950913_2951903_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-193	99.1
WP_001061422.1\|2951910_2952753_-	KilA-N domain-containing protein	S5MC03	Escherichia_phage	5.7e-140	91.8
WP_000767113.1\|2952772_2953162_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_000066917.1\|2953480_2954134_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_151294420.1\|2954133_2954628_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	3.1e-85	96.9
WP_000620696.1\|2955439_2955664_-	hypothetical protein	A5LH70	Enterobacteria_phage	5.7e-39	100.0
WP_096251738.1\|2955660_2956812_-	peptidase	A0A0P0ZE80	Stx2-converting_phage	5.3e-213	98.4
WP_096251739.1\|2957351_2957612_-	helix-turn-helix transcriptional regulator	A0A0P0ZCZ7	Stx2-converting_phage	7.3e-38	95.3
WP_071594161.1\|2957583_2957736_-	amino acid permease	NA	NA	NA	NA
WP_151294422.1\|2957709_2958402_+	helix-turn-helix transcriptional regulator	S5FUZ3	Shigella_phage	6.4e-121	96.5
WP_151294424.1\|2959125_2959488_+	hypothetical protein	U5P4J6	Shigella_phage	1.4e-58	97.5
WP_151294426.1\|2959554_2960379_+	DUF2303 family protein	A5LH63	Enterobacteria_phage	1.7e-149	99.6
WP_000008174.1\|2960506_2961043_+	5'-deoxynucleotidase	A5LH62	Enterobacteria_phage	2.8e-100	99.4
WP_151294428.1\|2961033_2961396_+	DUF551 domain-containing protein	A5LH61	Enterobacteria_phage	4.0e-66	98.3
WP_001061366.1\|2962016_2962211_+	hypothetical protein	A5LH59	Enterobacteria_phage	3.4e-32	100.0
WP_151294430.1\|2966020_2966122_-	peptide chain release factor 3	NA	NA	NA	NA
WP_151294432.1\|2966874_2967321_-	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA
WP_000204018.1\|2967289_2967703_-	DNA polymerase III subunit psi	NA	NA	NA	NA
WP_001272308.1\|2967805_2968837_+	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA
WP_001445803.1\|2969274_2969511_-	DUF1435 domain-containing protein	NA	NA	NA	NA
WP_000331573.1\|2969651_2970440_+	siderophore-iron reductase FhuF	NA	NA	NA	NA
WP_001300509.1\|2970477_2971155_-	DNA-binding transcriptional activator BglJ	NA	NA	NA	NA
WP_151294434.1\|2971112_2971787_-	response regulator transcription factor	NA	NA	NA	NA
WP_001346517.1\|2972459_2973230_+	threonine/serine exporter ThrE family protein	NA	NA	NA	NA
WP_000538191.1\|2973220_2973694_+	threonine/serine exporter	NA	NA	NA	NA
WP_151294436.1\|2973800_2974340_+	primosomal protein DnaT	T1SA92	Salmonella_phage	2.9e-28	62.8
WP_151294438.1\|2974342_2975080_+	DNA replication protein DnaC	V5UQI5	Shigella_phage	7.1e-62	50.4
WP_151295270.1\|2975128_2975623_+	DUF2501 domain-containing protein	NA	NA	NA	NA
WP_151294440.1\|2980592_2981954_+	MFS transporter	NA	NA	NA	NA
WP_151294442.1\|2982002_2983667_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	6.2e-13	39.6
WP_000543916.1\|2983785_2984232_-	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA
WP_001577661.1\|2984503_2985793_+	4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase	NA	NA	NA	NA
WP_151294444.1\|2985811_2987257_+	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA
WP_000459750.1\|2988567_2989371_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA
WP_151294447.1\|2989381_2990170_+	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA
WP_151294449.1\|2990287_2991664_+	4-hydroxyphenylacetate permease	NA	NA	NA	NA
WP_151294450.1\|2992813_2994376_+	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA	NA	NA	NA
WP_001175455.1\|2994393_2994906_+	4-hydroxyphenylacetate 3-monooxygenase reductase subunit	NA	NA	NA	NA
WP_000467859.1\|2997496_2997700_+	YbdD/YjiX family protein	NA	NA	NA	NA
WP_001418369.1\|3000104_3000389_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_151294453.1\|3003164_3004634_+	N-6 DNA methylase	J7I0U9	Acinetobacter_phage	1.3e-33	27.3
WP_001589603.1\|3006601_3006943_+	endoribonuclease SymE	NA	NA	NA	NA
WP_000394263.1\|3009180_3009345_-	DUF1127 domain-containing protein	NA	NA	NA	NA
WP_096251899.1\|3011175_3012120_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.7e-60	51.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

7. NZ_CP042620

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2575 : 23213

Escherichia_phage(94.44%)

transposase,lysis,holin,tail,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151295468.1\|2575_3421_+\|tail	phage tail protein	A0A222YWB7	Escherichia_phage	9.1e-146	90.4
WP_001396839.1\|3813_3963_+	hypothetical protein	A0A222YXS1	Escherichia_phage	7.9e-21	98.0
WP_151295469.1\|7120_7723_+\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	1.4e-95	89.5
WP_151295470.1\|7694_8108_-\|tail	tail fiber assembly protein	U5P083	Shigella_phage	7.5e-69	95.6
WP_151295471.1\|8359_9572_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.9e-169	99.3
WP_151295472.1\|10173_10500_+\|holin	holin	A0A222YZ46	Escherichia_phage	8.3e-47	93.5
WP_110459104.1\|10499_10946_+\|lysis	lysis protein	A0A222YXP5	Escherichia_phage	1.0e-79	98.6
WP_151295473.1\|10935_11553_+	hypothetical protein	A0A222YXB2	Escherichia_phage	3.6e-75	96.6
WP_151295474.1\|11549_13499_+\|head	head protein	A0A222YWA3	Escherichia_phage	1.8e-285	86.7
WP_151295475.1\|15303_16668_+	hypothetical protein	A0A222YY44	Escherichia_phage	2.8e-245	98.9
WP_000094097.1\|16793_17351_+	DUF4145 domain-containing protein	A0A222YYQ2	Escherichia_phage	2.3e-97	99.5
WP_001244352.1\|17395_17728_+	hypothetical protein	A0A222YZ97	Escherichia_phage	2.6e-56	99.1
WP_151295476.1\|18262_18760_+	hypothetical protein	A0A222YXQ7	Escherichia_phage	1.0e-88	97.0
WP_151295477.1\|18769_19495_+	hypothetical protein	A0A222YXQ7	Escherichia_phage	7.9e-130	97.9
WP_151295478.1\|21194_21671_+	replication protein RepL	A0A222YXV1	Escherichia_phage	8.3e-80	97.5
WP_071587727.1\|21926_22082_+	transcriptional regulator	NA	NA	NA	NA
WP_151295479.1\|22084_22309_+	host cell division inhibitor Icd-like protein	A0A222YWB3	Escherichia_phage	6.3e-38	98.6
WP_151295480.1\|22308_23016_+	DNA-binding protein	A0A222YXY0	Escherichia_phage	2.2e-129	99.1
WP_001344836.1\|23015_23213_+	hypothetical protein	A0A222YWF5	Escherichia_phage	3.1e-33	100.0

DBSCAN-SWA_2

44563 : 78572

Escherichia_phage(77.27%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072756863.1\|44563_45058_+	dUTP diphosphatase	A0A222YYP1	Escherichia_phage	3.9e-88	96.9
WP_151295486.1\|45072_45735_+	DUF2829 domain-containing protein	A0A1B0VBT1	Salmonella_phage	2.1e-97	79.6
WP_151295487.1\|46630_47011_-	type II toxin-antitoxin system death-on-curing family toxin	Q71T66	Escherichia_phage	6.7e-56	90.2
WP_151295380.1\|47010_47232_-	type II toxin-antitoxin system Phd/YefM family antitoxin	A0A222YXU1	Escherichia_phage	4.3e-31	98.6
WP_000506726.1\|47304_47694_-	DNA repair protein	Q1MVE7	Enterobacteria_phage	1.4e-69	99.2
WP_151295488.1\|47789_48068_-	DNA polymerase III subunit theta	A0A077SLL5	Escherichia_phage	6.0e-38	100.0
WP_071779389.1\|48241_48451_+	hypothetical protein	A0A222YY00	Escherichia_phage	1.4e-31	97.1
WP_151295489.1\|48704_49211_-	hypothetical protein	A0A077SK55	Escherichia_phage	9.5e-66	61.5
WP_000267999.1\|49442_49736_-	hypothetical protein	A0A077SK23	Escherichia_phage	2.0e-47	95.9
WP_105459169.1\|49722_50022_-	ASCH domain-containing protein	A5VWB6	Enterobacteria_phage	8.4e-46	94.5
WP_001716797.1\|50021_50282_-	hypothetical protein	A0A1B0V7L4	Salmonella_phage	6.0e-40	95.3
WP_151295490.1\|50278_51229_-	DUF551 domain-containing protein	A0A222YWE8	Escherichia_phage	3.2e-131	95.1
WP_000951706.1\|51225_51435_-	hypothetical protein	A0A077SL56	Escherichia_phage	4.2e-36	100.0
WP_151295491.1\|51958_52414_-	DUF4014 domain-containing protein	A0A222YXP4	Escherichia_phage	2.2e-77	97.4
WP_033816870.1\|52415_52607_-	hypothetical protein	A0A0F6R8N3	Escherichia_coli_O157_typing_phage	1.2e-08	53.6
WP_151295492.1\|52766_53444_-	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	3.4e-66	61.3
WP_116986855.1\|53430_53697_-	hypothetical protein	Q1MVG1	Enterobacteria_phage	6.6e-42	96.5
WP_151295493.1\|53693_54281_-	hypothetical protein	A0A077SLQ8	Escherichia_phage	3.0e-87	81.8
WP_151295494.1\|54285_55281_-	DUF968 domain-containing protein	A0A222YWL6	Escherichia_phage	2.1e-189	96.1
WP_000613619.1\|55378_56071_-	serine/threonine protein phosphatase	A0A222YWF0	Escherichia_phage	7.0e-136	99.1
WP_151295495.1\|56067_56379_-	hypothetical protein	A0A222YY67	Escherichia_phage	1.3e-57	98.1
WP_032342045.1\|56375_56600_-	hypothetical protein	A0A222YYR6	Escherichia_phage	3.2e-34	93.2
WP_151295496.1\|56577_56871_-	DUF4752 family protein	A0A222YWQ2	Escherichia_phage	2.0e-39	93.3
WP_119743278.1\|56867_57116_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	1.6e-29	86.1
WP_151295497.1\|57112_57865_-	hypothetical protein	A0A088CQ73	Enterobacteria_phage	1.2e-53	88.7
WP_047648367.1\|57873_58284_-	hypothetical protein	A0A076G6X8	Escherichia_phage	1.1e-32	75.7
WP_000834210.1\|58280_58769_-	hypothetical protein	A0A0U2QW67	Escherichia_phage	7.8e-41	65.2
WP_151295498.1\|58758_59043_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.1e-42	91.5
WP_151295499.1\|59970_60549_+	recombinase	A0A222YXV2	Escherichia_phage	1.2e-72	95.8
WP_151295500.1\|60795_61047_+	hypothetical protein	A0A222YWH9	Escherichia_phage	1.7e-23	100.0
WP_151295501.1\|61338_61554_+	host cell division inhibitor Icd-like protein	A0A222YWG3	Escherichia_phage	7.4e-36	97.1
WP_151295502.1\|62552_62864_+	transcriptional regulator	A0A222YY28	Escherichia_phage	2.2e-33	81.8
WP_000509541.1\|62860_63058_-	hypothetical protein	NA	NA	NA	NA
WP_151295503.1\|64165_64819_+	maturation control protein	A0A222YZ79	Escherichia_phage	5.4e-114	98.6
WP_151295504.1\|65148_65478_+\|plate	baseplate protein	A0A222YYR0	Escherichia_phage	2.2e-55	94.5
WP_021551809.1\|67499_67859_-	transcriptional regulator	A0A222YXG1	Escherichia_phage	3.5e-62	98.3
WP_021551810.1\|67862_68165_-	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	1.3e-17	43.3
WP_151295505.1\|68350_69103_+\|tail	phage tail protein	A0A222YXU3	Escherichia_phage	4.0e-129	90.0
WP_151295506.1\|69185_69866_+\|plate	baseplate	A0A222YWF4	Escherichia_phage	8.5e-110	89.4
WP_151295507.1\|71561_72467_+	recombination-associated protein RdgC	A0A222YY21	Escherichia_phage	3.6e-156	94.0
WP_151295508.1\|72450_73131_+	hypothetical protein	A0A222YXN3	Escherichia_phage	1.1e-133	99.1
WP_151295509.1\|74172_74457_-	hypothetical protein	A0A222YZA7	Escherichia_phage	1.2e-30	75.8
WP_151295510.1\|74449_75091_-	AAA family ATPase	A0A222YXS3	Escherichia_phage	8.8e-109	93.0
WP_151295511.1\|75380_75719_-	plasmid stabilization protein	A0A222YWJ6	Escherichia_phage	3.7e-50	97.3
WP_151295512.1\|78113_78572_+	hypothetical protein	A0A222YWG1	Escherichia_phage	6.2e-64	94.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage