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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041648 Klebsiella pneumoniae strain NKU_KlebA1 plasmid pKlebA1, complete sequence 0 crisprs csa3 0 0 2 0
NZ_CP041649 Klebsiella pneumoniae strain NKU_KlebA1 chromosome, complete genome 3 crisprs DEDDh,RT,cas3,csa3,DinG 0 0 6 0

Results visualization

1. NZ_CP041649
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041649_1 614874-615274 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041649_2 1260801-1260895 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041649_3 4095118-4095213 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5148 : 13925 11 Salmonella_phage(50.0%) integrase attL 4722:4735|attR 15607:15620
DBSCAN-SWA_2 133101 : 205280 69 Enterobacteria_phage(46.67%) tail,integrase,protease,portal,head,plate,capsid,terminase attL 128321:128340|attR 207822:207841
DBSCAN-SWA_3 2744293 : 2781093 44 Escherichia_phage(30.77%) integrase,tail,plate,capsid,tRNA,terminase,lysis,holin attL 2744256:2744272|attR 2745980:2745996
DBSCAN-SWA_4 4718825 : 4725254 7 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_5 4992066 : 5041314 61 Klebsiella_phage(22.92%) tail,integrase,transposase,terminase,holin attL 4983589:4983604|attR 5038621:5038636
DBSCAN-SWA_6 5156945 : 5250265 95 Enterobacteria_phage(45.61%) tail,protease,portal,head,plate,capsid,terminase,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP041648
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 7010 : 74735 62 Escherichia_phage(25.93%) transposase,integrase attL 11352:11411|attR 64280:64938
DBSCAN-SWA_2 133314 : 141256 7 Escherichia_phage(50.0%) integrase attL 136793:136806|attR 141728:141741
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage