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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042812 Arcobacter canalis strain LMG 29148 chromosome, complete genome 4 crisprs WYL,cas4,PrimPol,DEDDh,csa3,cas3,cas2,cas1,cas5,cas7b,cas8b1,cas6,PD-DExK 1 23 5 0

Results visualization

1. NZ_CP042812
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042812_1 910093-910390 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042812_2 1632709-1632842 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042812_3 1634398-1634664 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042812_4 2221017-2224304 TypeI-B III-B
50 spacers
cas2,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP042812_4 4.4|2221244|35|NZ_CP042812|CRISPRCasFinder 2221244-2221278 35 NZ_CP042812.1 2220982-2221016 1 0.971

1. spacer 4.4|2221244|35|NZ_CP042812|CRISPRCasFinder matches to position: 2220982-2221016, mismatch: 1, identity: 0.971

actccattttcggaaacccgaattcattcgggtca	CRISPR spacer
actcaattttcggaaacccgaattcattcgggtca	Protospacer
**** ******************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP042812_2 2.1|1632735|28|NZ_CP042812|CRISPRCasFinder 1632735-1632762 28 MN694186 Marine virus AFVG_250M615, complete genome 11518-11545 5 0.821
NZ_CP042812_4 4.43|2223787|36|NZ_CP042812|CRISPRCasFinder,CRT 2223787-2223822 36 NC_014260 Enterobacteria phage IME08, complete genome 108546-108581 6 0.833
NZ_CP042812_4 4.43|2223787|36|NZ_CP042812|CRISPRCasFinder,CRT 2223787-2223822 36 HM071924 Enterobacteria phage IME08, complete sequence 108546-108581 6 0.833
NZ_CP042812_4 4.76|2223794|36|NZ_CP042812|PILER-CR 2223794-2223829 36 NC_014260 Enterobacteria phage IME08, complete genome 108546-108581 6 0.833
NZ_CP042812_4 4.76|2223794|36|NZ_CP042812|PILER-CR 2223794-2223829 36 HM071924 Enterobacteria phage IME08, complete sequence 108546-108581 6 0.833
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 AP014281 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S23-C27, *** SEQUENCING IN PROGRESS *** 32586-32615 7 0.767
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 NZ_CP017105 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence 968981-969010 7 0.767
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 CP033543 Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-3, complete sequence 4045-4078 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_015919 Borreliella bissettii DN127 plasmid lp54, complete sequence 8872-8905 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP031397 Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence 8970-9003 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP019854 Borreliella burgdorferi plasmid lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP019765 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_011784 Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence 8782-8815 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_013130 Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence 8820-8853 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_013128 Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence 6535-6568 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_013129 Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence 8811-8844 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NC_001857 Borreliella burgdorferi B31 plasmid lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP017218 Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence 44898-44931 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 CP033543 Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-3, complete sequence 4045-4078 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_015919 Borreliella bissettii DN127 plasmid lp54, complete sequence 8872-8905 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP031397 Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence 8970-9003 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP019854 Borreliella burgdorferi plasmid lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP019765 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_011784 Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence 8782-8815 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_013130 Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence 8820-8853 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_013128 Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence 6535-6568 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_013129 Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence 8811-8844 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NC_001857 Borreliella burgdorferi B31 plasmid lp54, complete sequence 8826-8859 7 0.794
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP017218 Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence 44898-44931 7 0.794
NZ_CP042812_3 3.1|1634422|30|NZ_CP042812|CRISPRCasFinder 1634422-1634451 30 NC_019765 Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence 235303-235332 8 0.733
NZ_CP042812_3 3.1|1634422|30|NZ_CP042812|CRISPRCasFinder 1634422-1634451 30 NZ_CP010727 Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence 100870-100899 8 0.733
NZ_CP042812_3 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder 1634611-1634640 30 NZ_CP015644 Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence 29905-29934 8 0.733
NZ_CP042812_3 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder 1634611-1634640 30 NZ_CP017431 Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence 117447-117476 8 0.733
NZ_CP042812_3 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder 1634611-1634640 30 NZ_CP017429 Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence 30264-30293 8 0.733
NZ_CP042812_3 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder 1634611-1634640 30 NZ_CP016158 Staphylococcus simulans strain MR2 plasmid unnamed1 29409-29438 8 0.733
NZ_CP042812_3 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder 1634611-1634640 30 MN693524 Marine virus AFVG_25M219, complete genome 27972-28001 8 0.733
NZ_CP042812_4 4.20|2222287|35|NZ_CP042812|CRISPRCasFinder,CRT 2222287-2222321 35 NZ_LT960785 Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence 34760-34794 8 0.771
NZ_CP042812_4 4.22|2222418|37|NZ_CP042812|CRISPRCasFinder,CRT 2222418-2222454 37 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 60992-61028 8 0.784
NZ_CP042812_4 4.36|2223334|34|NZ_CP042812|CRISPRCasFinder,CRT 2223334-2223367 34 MT774401 CrAssphage cr6_1, complete genome 387-420 8 0.765
NZ_CP042812_4 4.53|2222294|35|NZ_CP042812|PILER-CR 2222294-2222328 35 NZ_LT960785 Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence 34760-34794 8 0.771
NZ_CP042812_4 4.55|2222425|37|NZ_CP042812|PILER-CR 2222425-2222461 37 NZ_CP047429 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence 60992-61028 8 0.784
NZ_CP042812_4 4.69|2223341|34|NZ_CP042812|PILER-CR 2223341-2223374 34 MT774401 CrAssphage cr6_1, complete genome 387-420 8 0.765
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019062 Synechococcus phage ACG-2014d isolate Syn7803C93, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019121 Synechococcus phage ACG-2014d isolate Syn7803US78, complete genome 90670-90699 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019126 Synechococcus phage ACG-2014d isolate Syn7803US83, complete genome 90765-90794 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019047 Synechococcus phage ACG-2014d isolate Syn7803C73, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019072 Synechococcus phage ACG-2014d isolate Syn7803US108, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019032 Synechococcus phage ACG-2014d isolate Syn7803C49, complete genome 90680-90709 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019078 Synechococcus phage ACG-2014d isolate Syn7803US114, complete genome 90670-90699 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019165 Synechococcus phage ACG-2014d isolate Syn7803C40, complete genome 90675-90704 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019124 Synechococcus phage ACG-2014d isolate Syn7803US80, complete genome 90822-90851 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019074 Synechococcus phage ACG-2014d isolate Syn7803US110, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019034 Synechococcus phage ACG-2014d isolate Syn7803C54, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019127 Synechococcus phage ACG-2014d isolate Syn7803US85, complete genome 90679-90708 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019118 Synechococcus phage ACG-2014d isolate Syn7803US64, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019075 Synechococcus phage ACG-2014d isolate Syn7803US111, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019131 Synechococcus phage ACG-2014d isolate Syn7803US95, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019057 Synechococcus phage ACG-2014d isolate Syn7803C89, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019056 Synechococcus phage ACG-2014d isolate Syn7803C88, partial genome 90704-90733 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019160 Synechococcus phage ACG-2014d isolate Syn7803C35, complete genome 90771-90800 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019112 Synechococcus phage ACG-2014d isolate Syn7803US59, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019073 Synechococcus phage ACG-2014d isolate Syn7803US109, complete genome 90676-90705 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019077 Synechococcus phage ACG-2014d isolate Syn7803US113, complete genome 90676-90705 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019129 Synechococcus phage ACG-2014d isolate Syn7803US89, complete genome 90704-90733 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019031 Synechococcus phage ACG-2014d isolate Syn7803C48, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019079 Synechococcus phage ACG-2014d isolate Syn7803US115, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019035 Synechococcus phage ACG-2014d isolate Syn7803C55, complete genome 89011-89040 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019120 Synechococcus phage ACG-2014d isolate Syn7803US71, complete genome 90676-90705 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019036 Synechococcus phage ACG-2014d isolate Syn7803C57, complete genome 90667-90696 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019048 Synechococcus phage ACG-2014d isolate Syn7803C75, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019113 Synechococcus phage ACG-2014d isolate Syn7803US5, complete genome 90724-90753 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019140 Synechococcus phage ACG-2014d isolate Syn7803C109, complete genome 90677-90706 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019119 Synechococcus phage ACG-2014d isolate Syn7803US65, complete genome 90728-90757 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019162 Synechococcus phage ACG-2014d isolate Syn7803C37, complete genome 90721-90750 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019130 Synechococcus phage ACG-2014d isolate Syn7803US94, complete genome 90677-90706 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019115 Synechococcus phage ACG-2014d isolate Syn7803US61, complete genome 90602-90631 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019139 Synechococcus phage ACG-2014d isolate Syn7803C108, complete genome 90768-90797 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019125 Synechococcus phage ACG-2014d isolate Syn7803US82, complete genome 90676-90705 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019070 Synechococcus phage ACG-2014d isolate Syn7803US104, complete genome 90819-90848 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019028 Synechococcus phage ACG-2014d isolate Syn7803C45, complete genome 90679-90708 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019083 Synechococcus phage ACG-2014d isolate Syn7803US122, complete genome 90673-90702 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019164 Synechococcus phage ACG-2014d isolate Syn7803C39, complete genome 90739-90768 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019117 Synechococcus phage ACG-2014d isolate Syn7803US63, complete genome 90658-90687 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019046 Synechococcus phage ACG-2014d isolate Syn7803C72, complete genome 90674-90703 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019050 Synechococcus phage ACG-2014d isolate Syn7803C77, complete genome 90769-90798 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019029 Synechococcus phage ACG-2014d isolate Syn7803C46, complete genome 90670-90699 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 KJ019080 Synechococcus phage ACG-2014d isolate Syn7803US116, complete genome 90672-90701 9 0.7
NZ_CP042812_3 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder 1634476-1634505 30 NC_026923 Synechococcus phage ACG-2014d isolate Syn7803C102, complete genome 90679-90708 9 0.7
NZ_CP042812_4 4.21|2222352|36|NZ_CP042812|CRISPRCasFinder,CRT 2222352-2222387 36 MN694363 Marine virus AFVG_250M224, complete genome 16083-16118 9 0.75
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 AJ972879 Yersinia phage phiR1-37 complete genome 246566-246599 9 0.735
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 NC_016163 Yersinia phage phiR1-37, complete genome 246566-246599 9 0.735
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP015809 Borrelia mayonii strain MN14-1539 plasmid lp54 9361-9394 9 0.735
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 NZ_CP015795 Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence 9361-9394 9 0.735
NZ_CP042812_4 4.54|2222359|36|NZ_CP042812|PILER-CR 2222359-2222394 36 MN694363 Marine virus AFVG_250M224, complete genome 16083-16118 9 0.75
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 AJ972879 Yersinia phage phiR1-37 complete genome 246566-246599 9 0.735
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 NC_016163 Yersinia phage phiR1-37, complete genome 246566-246599 9 0.735
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP015809 Borrelia mayonii strain MN14-1539 plasmid lp54 9361-9394 9 0.735
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 NZ_CP015795 Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence 9361-9394 9 0.735
NZ_CP042812_4 4.27|2222749|35|NZ_CP042812|CRISPRCasFinder,CRT 2222749-2222783 35 NC_019909 Yersinia phage phiR1-RT complete genome 46472-46506 10 0.714
NZ_CP042812_4 4.27|2222749|35|NZ_CP042812|CRISPRCasFinder,CRT 2222749-2222783 35 NC_028820 Yersinia phage vB_YenM_TG1, complete genome 43915-43949 10 0.714
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 NC_047948 Staphylococcus phage phiSA_BS2, complete genome 72142-72175 10 0.706
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MH078572 Staphylococcus phage phiSA_BS1, complete genome 26995-27028 10 0.706
NZ_CP042812_4 4.60|2222756|35|NZ_CP042812|PILER-CR 2222756-2222790 35 NC_019909 Yersinia phage phiR1-RT complete genome 46472-46506 10 0.714
NZ_CP042812_4 4.60|2222756|35|NZ_CP042812|PILER-CR 2222756-2222790 35 NC_028820 Yersinia phage vB_YenM_TG1, complete genome 43915-43949 10 0.714
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 NC_047948 Staphylococcus phage phiSA_BS2, complete genome 72142-72175 10 0.706
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MH078572 Staphylococcus phage phiSA_BS1, complete genome 26995-27028 10 0.706
NZ_CP042812_4 4.6|2221372|35|NZ_CP042812|CRISPRCasFinder,CRT,PILER-CR 2221372-2221406 35 MH598805 Pelagibacter phage HTVC109P, complete genome 27574-27608 11 0.686
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448791 Streptococcus phage Javan517, complete genome 40677-40710 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 NC_004587 Streptococcus prophage 315.4, complete genome 40253-40286 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 NC_003157 Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome 41523-41556 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448962 Streptococcus phage Javan496, complete genome 31524-31557 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448977 Streptococcus phage Javan530, complete genome 40158-40191 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448694 Streptococcus phage Javan179, complete genome 40127-40160 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448788 Streptococcus phage Javan511, complete genome 40158-40191 11 0.676
NZ_CP042812_4 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT 2222814-2222847 34 MK448950 Streptococcus phage Javan464, complete genome 40882-40915 11 0.676
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 KX119202 Helicobacter phage Pt1293U, complete genome 9150-9183 11 0.676
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 KX119198 Helicobacter phage Pt5322G, complete genome 8946-8979 11 0.676
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 KX119199 Helicobacter phage Pt5771G, complete genome 8996-9029 11 0.676
NZ_CP042812_4 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT 2223528-2223561 34 KX119203 Helicobacter phage PtB89G, complete genome 9027-9060 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448791 Streptococcus phage Javan517, complete genome 40677-40710 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 NC_004587 Streptococcus prophage 315.4, complete genome 40253-40286 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 NC_003157 Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome 41523-41556 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448962 Streptococcus phage Javan496, complete genome 31524-31557 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448977 Streptococcus phage Javan530, complete genome 40158-40191 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448694 Streptococcus phage Javan179, complete genome 40127-40160 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448788 Streptococcus phage Javan511, complete genome 40158-40191 11 0.676
NZ_CP042812_4 4.61|2222821|34|NZ_CP042812|PILER-CR 2222821-2222854 34 MK448950 Streptococcus phage Javan464, complete genome 40882-40915 11 0.676
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 KX119202 Helicobacter phage Pt1293U, complete genome 9150-9183 11 0.676
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 KX119198 Helicobacter phage Pt5322G, complete genome 8946-8979 11 0.676
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 KX119199 Helicobacter phage Pt5771G, complete genome 8996-9029 11 0.676
NZ_CP042812_4 4.72|2223535|34|NZ_CP042812|PILER-CR 2223535-2223568 34 KX119203 Helicobacter phage PtB89G, complete genome 9027-9060 11 0.676
NZ_CP042812_4 4.49|2224176|34|NZ_CP042812|CRISPRCasFinder,CRT 2224176-2224209 34 NZ_CP022523 Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence 412218-412251 12 0.647
NZ_CP042812_4 4.82|2224183|34|NZ_CP042812|PILER-CR 2224183-2224216 34 NZ_CP022523 Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence 412218-412251 12 0.647

1. spacer 2.1|1632735|28|NZ_CP042812|CRISPRCasFinder matches to MN694186 (Marine virus AFVG_250M615, complete genome) position: , mismatch: 5, identity: 0.821

atttccactatttataatatcatcgcca	CRISPR spacer
atttccaatatttataatatcacttaca	Protospacer
******* **************..  **

2. spacer 4.43|2223787|36|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_014260 (Enterobacteria phage IME08, complete genome) position: , mismatch: 6, identity: 0.833

agataaaggcgatataggtccacaaggtcctaaagg	CRISPR spacer
agataaaggagatacaggtccacaaggtattcaggg	Protospacer
********* ****.************* .* *.**

3. spacer 4.43|2223787|36|NZ_CP042812|CRISPRCasFinder,CRT matches to HM071924 (Enterobacteria phage IME08, complete sequence) position: , mismatch: 6, identity: 0.833

agataaaggcgatataggtccacaaggtcctaaagg	CRISPR spacer
agataaaggagatacaggtccacaaggtattcaggg	Protospacer
********* ****.************* .* *.**

4. spacer 4.76|2223794|36|NZ_CP042812|PILER-CR matches to NC_014260 (Enterobacteria phage IME08, complete genome) position: , mismatch: 6, identity: 0.833

agataaaggcgatataggtccacaaggtcctaaagg	CRISPR spacer
agataaaggagatacaggtccacaaggtattcaggg	Protospacer
********* ****.************* .* *.**

5. spacer 4.76|2223794|36|NZ_CP042812|PILER-CR matches to HM071924 (Enterobacteria phage IME08, complete sequence) position: , mismatch: 6, identity: 0.833

agataaaggcgatataggtccacaaggtcctaaagg	CRISPR spacer
agataaaggagatacaggtccacaaggtattcaggg	Protospacer
********* ****.************* .* *.**

6. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to AP014281 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S23-C27, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

gtgataatatcatcatccgctccaccatct	CRISPR spacer
tatagaatatcatcatcagctccatcatca	Protospacer
   * ************ ******.**** 

7. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 7, identity: 0.767

gtgataatatcatcatccgctccaccatct	CRISPR spacer
gcgataatatcaacatccggtccacaaagg	Protospacer
*.********** ****** ***** *   

8. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to CP033543 (Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-3, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
aaatttaatcgcttttcttttctttaaataattc	Protospacer
************.*** *********..* * *.

9. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caatttaatctcctttatcttcttt---taagttttg	Protospacer
 ********* *******.******   * ****   

10. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

11. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

12. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

13. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

14. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

15. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

16. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

17. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

18. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

19. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to CP033543 (Acinetobacter pittii strain 2014S06-099 plasmid p2014S06-099-3, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
aaatttaatcgcttttcttttctttaaataattc	Protospacer
************.*** *********..* * *.

20. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_015919 (Borreliella bissettii DN127 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caatttaatctcctttatcttcttt---taagttttg	Protospacer
 ********* *******.******   * ****   

21. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP031397 (Borreliella burgdorferi strain MM1 plasmid plsm_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

22. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP019854 (Borreliella burgdorferi plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

23. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP019765 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

24. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_011784 (Borreliella burgdorferi ZS7 plasmid ZS7_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

25. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_013130 (Borreliella burgdorferi N40 plasmid N40_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

26. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_013128 (Borrelia burgdorferi 297 plasmid 297_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

27. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_013129 (Borreliella burgdorferi JD1 plasmid JD1_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

28. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NC_001857 (Borreliella burgdorferi B31 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

29. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP017218 (Borreliella burgdorferi strain B331 plasmid B331_lp54, complete sequence) position: , mismatch: 7, identity: 0.794

aaatttaatcgcctttattttctttaggttagtt---	CRISPR spacer
caattttatctcctttattttcttt---taagttttg	Protospacer
 ***** *** **************   * ****   

30. spacer 3.1|1634422|30|NZ_CP042812|CRISPRCasFinder matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 8, identity: 0.733

aatacagtatcgcttccatctccaccataa	CRISPR spacer
tctacagtgtcgcttccatctccaaagttc	Protospacer
  ******.***************  .*  

31. spacer 3.1|1634422|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP010727 (Phaeobacter inhibens strain P88 plasmid pP88_b, complete sequence) position: , mismatch: 8, identity: 0.733

aatacagtatcgcttccatctccaccataa	CRISPR spacer
cgcatagtatcgcgtccgtctccaccattg	Protospacer
 ..*.******** ***.********** .

32. spacer 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP015644 (Staphylococcus simulans strain MR1 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tttaagatattactattaccatctcctttg	CRISPR spacer
actcctatattactattactatatccttta	Protospacer
 .*   *************.** ******.

33. spacer 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP017431 (Staphylococcus simulans strain MR4 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

tttaagatattactattaccatctcctttg	CRISPR spacer
actcctatattactattactatatccttta	Protospacer
 .*   *************.** ******.

34. spacer 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP017429 (Staphylococcus simulans strain MR3 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tttaagatattactattaccatctcctttg	CRISPR spacer
actcctatattactattactatatccttta	Protospacer
 .*   *************.** ******.

35. spacer 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder matches to NZ_CP016158 (Staphylococcus simulans strain MR2 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

tttaagatattactattaccatctcctttg	CRISPR spacer
actcctatattactattactatatccttta	Protospacer
 .*   *************.** ******.

36. spacer 3.4|1634611|30|NZ_CP042812|CRISPRCasFinder matches to MN693524 (Marine virus AFVG_25M219, complete genome) position: , mismatch: 8, identity: 0.733

tttaagatattactattaccatctcctttg	CRISPR spacer
ttaccatcattactactaccatctcctttt	Protospacer
**   . .*******.************* 

37. spacer 4.20|2222287|35|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_LT960785 (Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.771

ggtatttctggttcttttatatcttttaattttcg	CRISPR spacer
ttattttctggttcttttttatcttttatttctgg	Protospacer
    ************** ********* **.* *

38. spacer 4.22|2222418|37|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 8, identity: 0.784

aatttaaaagaacaaaataatattaatcttccaccaa--	CRISPR spacer
aatttaaaacaacaaaataatattaaaat--cattgata	Protospacer
********* ****************  *  **...*  

39. spacer 4.36|2223334|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MT774401 (CrAssphage cr6_1, complete genome) position: , mismatch: 8, identity: 0.765

aattagagcttgaagataaacttactttttttaa	CRISPR spacer
taaaagtgaatgaagataaacttactattattaa	Protospacer
 *  ** *  **************** ** ****

40. spacer 4.53|2222294|35|NZ_CP042812|PILER-CR matches to NZ_LT960785 (Lactobacillus sakei isolate MFPB19 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.771

ggtatttctggttcttttatatcttttaattttcg	CRISPR spacer
ttattttctggttcttttttatcttttatttctgg	Protospacer
    ************** ********* **.* *

41. spacer 4.55|2222425|37|NZ_CP042812|PILER-CR matches to NZ_CP047429 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-1, complete sequence) position: , mismatch: 8, identity: 0.784

aatttaaaagaacaaaataatattaatcttccaccaa--	CRISPR spacer
aatttaaaacaacaaaataatattaaaat--cattgata	Protospacer
********* ****************  *  **...*  

42. spacer 4.69|2223341|34|NZ_CP042812|PILER-CR matches to MT774401 (CrAssphage cr6_1, complete genome) position: , mismatch: 8, identity: 0.765

aattagagcttgaagataaacttactttttttaa	CRISPR spacer
taaaagtgaatgaagataaacttactattattaa	Protospacer
 *  ** *  **************** ** ****

43. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019062 (Synechococcus phage ACG-2014d isolate Syn7803C93, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

44. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019121 (Synechococcus phage ACG-2014d isolate Syn7803US78, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

45. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019126 (Synechococcus phage ACG-2014d isolate Syn7803US83, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

46. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019047 (Synechococcus phage ACG-2014d isolate Syn7803C73, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

47. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019072 (Synechococcus phage ACG-2014d isolate Syn7803US108, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

48. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019032 (Synechococcus phage ACG-2014d isolate Syn7803C49, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

49. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019078 (Synechococcus phage ACG-2014d isolate Syn7803US114, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

50. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019165 (Synechococcus phage ACG-2014d isolate Syn7803C40, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

51. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019124 (Synechococcus phage ACG-2014d isolate Syn7803US80, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

52. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019074 (Synechococcus phage ACG-2014d isolate Syn7803US110, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

53. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019034 (Synechococcus phage ACG-2014d isolate Syn7803C54, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

54. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019127 (Synechococcus phage ACG-2014d isolate Syn7803US85, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

55. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019118 (Synechococcus phage ACG-2014d isolate Syn7803US64, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

56. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019075 (Synechococcus phage ACG-2014d isolate Syn7803US111, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

57. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019131 (Synechococcus phage ACG-2014d isolate Syn7803US95, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

58. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019057 (Synechococcus phage ACG-2014d isolate Syn7803C89, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

59. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019056 (Synechococcus phage ACG-2014d isolate Syn7803C88, partial genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

60. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019160 (Synechococcus phage ACG-2014d isolate Syn7803C35, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

61. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019112 (Synechococcus phage ACG-2014d isolate Syn7803US59, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

62. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019073 (Synechococcus phage ACG-2014d isolate Syn7803US109, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

63. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019077 (Synechococcus phage ACG-2014d isolate Syn7803US113, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

64. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019129 (Synechococcus phage ACG-2014d isolate Syn7803US89, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

65. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019031 (Synechococcus phage ACG-2014d isolate Syn7803C48, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

66. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019079 (Synechococcus phage ACG-2014d isolate Syn7803US115, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

67. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019035 (Synechococcus phage ACG-2014d isolate Syn7803C55, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

68. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019120 (Synechococcus phage ACG-2014d isolate Syn7803US71, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

69. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019036 (Synechococcus phage ACG-2014d isolate Syn7803C57, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

70. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019048 (Synechococcus phage ACG-2014d isolate Syn7803C75, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

71. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019113 (Synechococcus phage ACG-2014d isolate Syn7803US5, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

72. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019140 (Synechococcus phage ACG-2014d isolate Syn7803C109, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

73. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019119 (Synechococcus phage ACG-2014d isolate Syn7803US65, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

74. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019162 (Synechococcus phage ACG-2014d isolate Syn7803C37, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

75. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019130 (Synechococcus phage ACG-2014d isolate Syn7803US94, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

76. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019115 (Synechococcus phage ACG-2014d isolate Syn7803US61, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

77. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019139 (Synechococcus phage ACG-2014d isolate Syn7803C108, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

78. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019125 (Synechococcus phage ACG-2014d isolate Syn7803US82, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

79. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019070 (Synechococcus phage ACG-2014d isolate Syn7803US104, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

80. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019028 (Synechococcus phage ACG-2014d isolate Syn7803C45, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

81. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019083 (Synechococcus phage ACG-2014d isolate Syn7803US122, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

82. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019164 (Synechococcus phage ACG-2014d isolate Syn7803C39, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

83. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019117 (Synechococcus phage ACG-2014d isolate Syn7803US63, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

84. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019046 (Synechococcus phage ACG-2014d isolate Syn7803C72, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

85. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019050 (Synechococcus phage ACG-2014d isolate Syn7803C77, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

86. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019029 (Synechococcus phage ACG-2014d isolate Syn7803C46, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

87. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to KJ019080 (Synechococcus phage ACG-2014d isolate Syn7803US116, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

88. spacer 3.2|1634476|30|NZ_CP042812|CRISPRCasFinder matches to NC_026923 (Synechococcus phage ACG-2014d isolate Syn7803C102, complete genome) position: , mismatch: 9, identity: 0.7

gtgataatatcatcatccgctccaccatct	CRISPR spacer
ggtgtaatatcctcatccgctccacttata	Protospacer
*  .******* *************.  . 

89. spacer 4.21|2222352|36|NZ_CP042812|CRISPRCasFinder,CRT matches to MN694363 (Marine virus AFVG_250M224, complete genome) position: , mismatch: 9, identity: 0.75

ctctggact---ttatactgcaaaagaatatgcagatga	CRISPR spacer
---aggatcaaattatagtgcaaaagaatatgcagttgg	Protospacer
    ***..   ***** ***************** **.

90. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 9, identity: 0.735

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
ctatcactgaaaaagatctagacaaatatcttgt	Protospacer
 * *  *********** **.**********  .

91. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 9, identity: 0.735

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
ctatcactgaaaaagatctagacaaatatcttgt	Protospacer
 * *  *********** **.**********  .

92. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 9, identity: 0.735

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
caattttatctcctttattttcttttaggttttg	Protospacer
 ***** *** ************** .* *  * 

93. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.735

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
caattttatctcctttattttcttttaggttttg	Protospacer
 ***** *** ************** .* *  * 

94. spacer 4.54|2222359|36|NZ_CP042812|PILER-CR matches to MN694363 (Marine virus AFVG_250M224, complete genome) position: , mismatch: 9, identity: 0.75

ctctggact---ttatactgcaaaagaatatgcagatga	CRISPR spacer
---aggatcaaattatagtgcaaaagaatatgcagttgg	Protospacer
    ***..   ***** ***************** **.

95. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to AJ972879 (Yersinia phage phiR1-37 complete genome) position: , mismatch: 9, identity: 0.735

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
ctatcactgaaaaagatctagacaaatatcttgt	Protospacer
 * *  *********** **.**********  .

96. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to NC_016163 (Yersinia phage phiR1-37, complete genome) position: , mismatch: 9, identity: 0.735

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
ctatcactgaaaaagatctagacaaatatcttgt	Protospacer
 * *  *********** **.**********  .

97. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 9, identity: 0.735

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
caattttatctcctttattttcttttaggttttg	Protospacer
 ***** *** ************** .* *  * 

98. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.735

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
caattttatctcctttattttcttttaggttttg	Protospacer
 ***** *** ************** .* *  * 

99. spacer 4.27|2222749|35|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 10, identity: 0.714

ctaccgcttgctatttccaactttacaattttgtt	CRISPR spacer
tttttatcttctatttctaattttacaattttgtt	Protospacer
.* .....* *******.**.**************

100. spacer 4.27|2222749|35|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 10, identity: 0.714

ctaccgcttgctatttccaactttacaattttgtt	CRISPR spacer
tttttatcttctatttctaattttacaattttgtt	Protospacer
.* .....* *******.**.**************

101. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.706

atttacctgaaaaagatataaac-----aaatatctatc	CRISPR spacer
atttaactgaaaaagatttaaacactttaagtga-----	Protospacer
***** *********** *****     **.*.      

102. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.706

atttacctgaaaaagatataaac-----aaatatctatc	CRISPR spacer
atttaactgaaaaagatttaaacactttaagtga-----	Protospacer
***** *********** *****     **.*.      

103. spacer 4.60|2222756|35|NZ_CP042812|PILER-CR matches to NC_019909 (Yersinia phage phiR1-RT complete genome) position: , mismatch: 10, identity: 0.714

ctaccgcttgctatttccaactttacaattttgtt	CRISPR spacer
tttttatcttctatttctaattttacaattttgtt	Protospacer
.* .....* *******.**.**************

104. spacer 4.60|2222756|35|NZ_CP042812|PILER-CR matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 10, identity: 0.714

ctaccgcttgctatttccaactttacaattttgtt	CRISPR spacer
tttttatcttctatttctaattttacaattttgtt	Protospacer
.* .....* *******.**.**************

105. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 10, identity: 0.706

atttacctgaaaaagatataaac-----aaatatctatc	CRISPR spacer
atttaactgaaaaagatttaaacactttaagtga-----	Protospacer
***** *********** *****     **.*.      

106. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MH078572 (Staphylococcus phage phiSA_BS1, complete genome) position: , mismatch: 10, identity: 0.706

atttacctgaaaaagatataaac-----aaatatctatc	CRISPR spacer
atttaactgaaaaagatttaaacactttaagtga-----	Protospacer
***** *********** *****     **.*.      

107. spacer 4.6|2221372|35|NZ_CP042812|CRISPRCasFinder,CRT,PILER-CR matches to MH598805 (Pelagibacter phage HTVC109P, complete genome) position: , mismatch: 11, identity: 0.686

ttaatcttttttgttgtagctcttcatttcttgct	CRISPR spacer
ttaaacttttttgttgttgctcttccacattaatg	Protospacer
**** ************ *******  . .* .. 

108. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

109. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

110. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

111. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

112. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

113. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

114. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

115. spacer 4.28|2222814|34|NZ_CP042812|CRISPRCasFinder,CRT matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

116. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to KX119202 (Helicobacter phage Pt1293U, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

117. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to KX119198 (Helicobacter phage Pt5322G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

118. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to KX119199 (Helicobacter phage Pt5771G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

119. spacer 4.39|2223528|34|NZ_CP042812|CRISPRCasFinder,CRT matches to KX119203 (Helicobacter phage PtB89G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

120. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

121. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

122. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

123. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

124. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

125. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

126. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

127. spacer 4.61|2222821|34|NZ_CP042812|PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 11, identity: 0.676

atttacctgaaaaagatataaacaaatatctatc	CRISPR spacer
tatttcctgaaaaagaaataaacaaacgggcgta	Protospacer
  ** *********** *********..  ..* 

128. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to KX119202 (Helicobacter phage Pt1293U, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

129. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to KX119198 (Helicobacter phage Pt5322G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

130. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to KX119199 (Helicobacter phage Pt5771G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

131. spacer 4.72|2223535|34|NZ_CP042812|PILER-CR matches to KX119203 (Helicobacter phage PtB89G, complete genome) position: , mismatch: 11, identity: 0.676

aaatttaatcgcctttattttctttaggttagtt	CRISPR spacer
tgatttcatcggctttattttctttatctagcgc	Protospacer
 .**** **** **************  * .  .

132. spacer 4.49|2224176|34|NZ_CP042812|CRISPRCasFinder,CRT matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 12, identity: 0.647

ctagcccagatagctggacagataaaatagcaga	CRISPR spacer
ggagcccaaatagctggagagataaacctatctt	Protospacer
  ******.********* ******* . ..   

133. spacer 4.82|2224183|34|NZ_CP042812|PILER-CR matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 12, identity: 0.647

ctagcccagatagctggacagataaaatagcaga	CRISPR spacer
ggagcccaaatagctggagagataaacctatctt	Protospacer
  ******.********* ******* . ..   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 401301 : 408163 9 Campylobacter_virus(33.33%) tRNA NA
DBSCAN-SWA_2 596246 : 606134 13 uncultured_virus(28.57%) NA NA
DBSCAN-SWA_3 921295 : 957118 52 Vibrio_phage(22.22%) integrase,portal,capsid,tRNA,tail,plate,terminase attL 925585:925602|attR 935157:935174
DBSCAN-SWA_4 1437889 : 1492068 48 Cronobacter_phage(12.5%) plate,integrase,protease attL 1446923:1446941|attR 1483440:1483458
DBSCAN-SWA_5 1921419 : 1948047 38 Bacillus_phage(16.67%) integrase,portal,transposase,tail,plate attL 1920204:1920221|attR 1949822:1949839
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage