CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042432	Anseongella ginsenosidimutans strain Gsoil 524 chromosome, complete genome	23 crisprs	csa3,cas3,RT,PD-DExK,WYL,cas9,cas1,cas2,DEDDh	3	39	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042432_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_1

126723-126816

Orphan

Consensus_repeat	Method
GTCAGGGTCCTGCTTTGTTCCGATCCGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_1

>merge|NZ_CP042432|1|126723-126816|CRISPRCasFinder
GTCAGGGTCCTGCTTTGTTCCGATCCGAAGGCTAAAAGCGGAAAAGCACATGATCCCTTACTTCGTCAGGGTCCTGCTTTGTTCCGATCCGAAG

>NZ_CP042432|1|1|126723-126816|CRISPRCasFinder
GTCAGGGTCCTGCTTTGTTCCGATCCGAAG	GCTAAAAGCGGAAAAGCACATGATCCCTTACTTC
GTCAGGGTCCTGCTTTGTTCCGATCCGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_158640474.1\|139781_140768_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042432.1\|WP_132127923.1\|125070_125799_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP042432.1\|WP_132127788.1\|128958_130590_-\|Zn-dependent-hydrolase	unknown	unknown	gnl\|CDD\|215425
NZ_CP042432.1\|WP_132127781.1\|138628_139210_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP042432.1\|WP_132127783.1\|134389_136318_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP042432.1\|WP_132127798.1\|119588_120473_-\|NAD-kinase	unknown	unknown	gnl\|CDD\|179352
NZ_CP042432.1\|WP_132127792.1\|124267_125074_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP042432.1\|WP_132127800.1\|117979_118723_-\|isoprenyl-transferase	unknown	unknown	gnl\|CDD\|259850
NZ_CP042432.1\|WP_132127789.1\|127755_128904_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP042432.1\|WP_132127784.1\|134006_134336_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132127786.1\|131346_132210_+\|UbiA-family-prenyltransferase	unknown	unknown	gnl\|CDD\|237247
NZ_CP042432.1\|WP_132127797.1\|120486_121143_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341419
NZ_CP042432.1\|WP_132127793.1\|123496_124258_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187604
NZ_CP042432.1\|WP_132127796.1\|121633_122416_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP042432.1\|WP_132127794.1\|123023_123473_-\|GatB/YqeY-domain-containing-protein	unknown	unknown	gnl\|CDD\|370480
NZ_CP042432.1\|WP_132127785.1\|132206_133907_+\|M3-family-oligoendopeptidase	unknown	unknown	gnl\|CDD\|341069
NZ_CP042432.1\|WP_132127799.1\|118722_119583_-\|outer-membrane-beta-barrel-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132127791.1\|125928_126552_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
NZ_CP042432.1\|WP_132127780.1\|139210_139738_+\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP042432.1\|WP_132127787.1\|130738_131350_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_158640474.1\|139781_140768_+\|hypothetical-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	5.4203e-41
NZ_CP042432.1\|WP_132127923.1\|125070_125799_-\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	4.03867e-112
NZ_CP042432.1\|WP_132127788.1\|128958_130590_-\|Zn-dependent-hydrolase	gnl\|CDD\|215425	PLN02791, PLN02791, Nudix hydrolase homolog.	5.48497e-125
NZ_CP042432.1\|WP_132127781.1\|138628_139210_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	0.000548865
NZ_CP042432.1\|WP_132127783.1\|134389_136318_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.57975e-103
NZ_CP042432.1\|WP_132127798.1\|119588_120473_-\|NAD-kinase	gnl\|CDD\|179352	PRK01911, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	1.25786e-149
NZ_CP042432.1\|WP_132127792.1\|124267_125074_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	0.00904648
NZ_CP042432.1\|WP_132127800.1\|117979_118723_-\|isoprenyl-transferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	1.31639e-134
NZ_CP042432.1\|WP_132127789.1\|127755_128904_-\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	7.33071e-27
NZ_CP042432.1\|WP_132127786.1\|131346_132210_+\|UbiA-family-prenyltransferase	gnl\|CDD\|237247	PRK12886, ubiA, prenyltransferase; Reviewed.	6.17444e-98
NZ_CP042432.1\|WP_132127797.1\|120486_121143_-\|CBS-domain-containing-protein	gnl\|CDD\|341419	cd17783, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	3.07076e-37
NZ_CP042432.1\|WP_132127796.1\|121633_122416_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.31737e-29
NZ_CP042432.1\|WP_132127794.1\|123023_123473_-\|GatB/YqeY-domain-containing-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	1.57612e-42
NZ_CP042432.1\|WP_132127785.1\|132206_133907_+\|M3-family-oligoendopeptidase	gnl\|CDD\|341069	cd09606, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3 oligopeptidase F (oligendopeptidase) is mostly bacterial and includes oligoendopeptidase F from Geobacillus stearothermophilus. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids and may cleave proteins at Leu-Gly. The PepF gene is duplicated in Lactococcus lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	0
NZ_CP042432.1\|WP_132127793.1\|123496_124258_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.41709e-129
NZ_CP042432.1\|WP_132127791.1\|125928_126552_+\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	1.42998e-44
NZ_CP042432.1\|WP_132127780.1\|139210_139738_+\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	1.22428e-53
NZ_CP042432.1\|WP_132127787.1\|130738_131350_+\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	4.6832e-92

>NZ_CP042432.1|WP_132127791.1|125928_126552_+|hypothetical-protein
MQKTDLTKLYKSYYSAKNTPELVETEAAAFLSLAGKGDPSGESFAADIQALYATAYTLKFMYKATDQDFVVAKLEGLWDFDEQLYSGFSLSEAPIKIPRKDWRYRLLIRLPEFVRPEDITEAANRVLLKKQLDRALDISFFNLPESKAVQMLHTGPFDKEVETLRQIQAFISARNLQKNGLHHEIYLSDFRKTPKEKLRTILREPVK
>NZ_CP042432.1|WP_132127923.1|125070_125799_-|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MSRTVKPYKELATGKKEQVAQMFNNIAGKYDFLNHFLSAGIDRSWRRKAIDELKEIHPRRILDVATGTGDLAFEALRLKPGKITGVDISEGMLAIAREKALKRGVEQIVQLRKADSEKLPFSDNSFDAVTVGFGVRNFENLENGLADMYRVLRPGGKLVVLEFSKPRAFPVKQLYSFYSFKILPFFGRLFSRDKKAYSYLPESVAAFPDGKDFALLMEKGGFRETKVRHLTLGICAIYTGKK
>NZ_CP042432.1|WP_132127792.1|124267_125074_-|outer-membrane-beta-barrel-protein
MKKCCVLVLSIFLWLPCVAQFINDGGNIDQQPYNFGFSLALNYGSFNVIKRSDYMEEFQYTNVNEETTTVPPLAAIKSIGKPGFSLGLLANLNLHRNFDLRFTPNIIFVDRDIEYIYQREEAGGQPGNNEPPADVLVPEDRRLNIRFTNLQYPLLLKFKSNRQGNVRAYVIGGAKFCMDVTSRKKYDEAMSNADEFPADAENSLFIDRNYFAWEAGIGMDLYYEFFKCSPELKISRSFGNVLNNDDNLYSRPLAGLFAELVQFTIHFE
>NZ_CP042432.1|WP_132127793.1|123496_124258_-|SDR-family-NAD(P)-dependent-oxidoreductase
MPMIVLITGATSGIGKACASIFARNKYNLILNGRREDRLTELAEQLAGRYGTVSHLLPFDVRDRAAVNAAVESLPQEWKQIDLLINNAGLALGLAPLPDGDADDWDTMIDTNIRGLLYVSKAVASMMRASERGHIINIGSIAGKEVYPDGGVYCATKHAVDALSRAMRIDLLPYRVKVTAVNPGAVETEFSIVRFKGDAGRAKSVYKGFEPLAAEDIAETVYFAASRPPHVNIDDITVMPAAQAGATRFNRND
>NZ_CP042432.1|WP_132127794.1|123023_123473_-|GatB/YqeY-domain-containing-protein
MELITTIDSDIKEAMLARDAARLRGLRSIKAALLLAKTEEGASGTISPETELKVLQKLAKQRKESAEIYREQQRPDLEQTETEELEVIESYLPKQMDPAELEAEIKKIIESSGAASMKDMGRVMGQASKQFAGRADGKTVSETVKRLLS
>NZ_CP042432.1|WP_132127796.1|121633_122416_-|alpha/beta-hydrolase
MNYQIREENGFSYVEEGKGQVLLLLHGLFGALSNWEMVIERFRSDYKVIIPLMPIYQMPLIKTSAKSLARFIHKFVVYKKLDRFTLLGNSLGGHVALIYALEHQERVHSMVLTGSSGLYENSFGGSFPKRESYDFIKERVEFTFCDPATATKELVDEVFAIVNDRNRVMKILAMAKSAIRHNMSKDLQHIHVPVSLIWGREDRVTPPEVAEEFHALLPNSELSWIDKCGHAPMMEKPNEFNDHLSAFLKKVYAKEASDLK
>NZ_CP042432.1|WP_132127797.1|120486_121143_-|CBS-domain-containing-protein
MLAVELLSDYIPALKTSNSVQTAFDRMDEFRVSHLPVVNGMDFLGLVSDQDLIEIADHSQPIGTSLPLYQSVQDSQHVYDVIRMVHELQLTAVPVVDEKKKYLGLISMNSLVTYFAQLTAVDHPGGIVVLELGARDFQLSEIARIVEANDAFVLSSYIRSFSGSTKLELTMKISKTDLTHIIASFERFNYLVKASFHQASHRDDTMDRFDSFMHYLNI
>NZ_CP042432.1|WP_132127798.1|119588_120473_-|NAD-kinase
MRIAIYGRQFGEHSFPYIQEVLQILEKYDAEVSIYEPFRNFILEQQIGEAARTGVFSSHEDLPRDASFLLSLGGDGTLLDTVTLIRDSGLPVLGINLGRLGFLASINKIDIEKAIESLFQGEFTFDERSLLQLRTDDQLFGGLNYALNEMTIYRGEDASMIIIHSYLNGEFLNSYWADGLIVATPTGSTAYSLSCGGPIILPGSNNFLITPICPHNLSVRPVVVNDMSELSFEVDSRGCRFQVFMDSRKETVDIGTRLSIRKERFSINLVRLNNESYFGTLRNKLMWGLDTRNY
>NZ_CP042432.1|WP_132127799.1|118722_119583_-|outer-membrane-beta-barrel-protein
MPGIVKITGIVLILLLSFGEAGAQKIEVGLLAGGSGYMGDLNTHNYQRYSHPALGALLRWNINPRNSVKFSFLHGTLQGSDATSGNPYQESRNLYFRSPLNEFSVQFEFNFFRYNPLWGNEKFSPYLFTGISVFSFDPEAKGTPSGSGSEEWYRLRDLGTEGQGLPGYPDKYKLAQMAIPIGIGVKFNLGRNWNLTGEMGYRPTFTDFLDDVSGYYPDPAVFETTDPPAPLSKYFSDRRLNRAPENPSGLQRGDLLKKDTYLFAVIGISYTFVSSWCPAFSDWGRE
>NZ_CP042432.1|WP_132127800.1|117979_118723_-|isoprenyl-transferase
MSKQDQIDKARLPRHVAIIMDGNGRWAKKKGLRRVLGHQNGVKAVRDTVEAAAELGIKYVTLYAFSTENWKRPQYEVNALMELLVSTIHKEVKTLMKNEIRLGTIGNLGELPKNCYTELMEAIELTRKNTRMTLNLALSYSARWEITQAMKKAAAMAAEGRVQPDDITEEYVSSLLCTADMPDPELMIRTSGEHRISNFLLWQIAYAELYFTEKFWPDFRRDDFYDAIISFQGRERRFGQTSEQIVH
>NZ_CP042432.1|WP_132127789.1|127755_128904_-|FtsX-like-permease-family-protein
MKIKTVSALRNPHAAPGNRLFARSLVVIQFALALLLITGCLVINLQSRFLQGKDLGYNEENLLKVSLPVNMDGGGISLKNELRQHIRFGSAALGALRTNSGLEMEAGTGRLLSYSMAVDENFLETAEIRLKAGRNFDSREHHSNVLVNEAFVQKFDIDRPVGRKISSSQDSEFTIIGVVNDFQAGALDRMSPLILFKAGSAWGDGSDLFLRLPPGDISKDLSEFAAIFRKHFPYYPFDAQFQADINLRSYRAALRWQRIVNYSCAMAIFIACFGLLGLSLLSAQSRTKEIGIRKVLGASVSGIVALLSGNFIKPVLLAIILATPLAWYIMGQWLEDFAYRISLQWWMFALAGLLALIIALFTVCFQSIKAALANPADSLRNE
>NZ_CP042432.1|WP_132127788.1|128958_130590_-|Zn-dependent-hydrolase
MKKPYILLAGILLSGAFSCEKPGENMADDQNMQEKLEQYVSVRLTADLSGLSGNQREMIPLLIEAAKVMDSLFWREAYGDPDSLLNSLEDEATREYVRINYGPWDRLDNNAPFIEGIGEKPEGANFYPEDMTKEEFEQADLPGKDSLYTVLRRDNAGELYTIPYHELFSQQVQYAAGLLEKAAALAEDEGLKKYLELRAEALRTDRYRRSDLAWMDMKDNTIEVVIGPIETYEDRLFGYKAAHEAYVLLKDREWSERLEKYAAYLPELQQNLPVEDRYKQEKPGSDADLNAYDVIYYAGDCNAGSKTIAINLPNDEQVQLQKGTRRLQLKNAMQAKFDKIMLPITGLLIDSAQRANVTFDAFFANTMFHEVAHGLGIKNTLTDKGTVREALKEHASALEEGKADILGLYMIMQLLEKNELEGSPEDYMTTFMAGIFRSVRFGASSAHGVANMIRFNYFREQDAFQRLANGTYRVDYAKMKMAADSLSRLILTLQGNGDYAGVAKLVEEKGRITPQLQSDLDRLGEAGIPVDVVFEQGVEVLGL
>NZ_CP042432.1|WP_132127787.1|130738_131350_+|YihA-family-ribosome-biogenesis-GTP-binding-protein
MEIRSAEFICSNTKVDKLPLPDKPEHAFIGRSNVGKSSLINMLTGKRKLAKTSQTPGKTQLINHFLINGIWYMVDLPGYGYARTSKKNRRSWEGFITDYLERRPNLQCVMVLIDSRLEPQAIDLEFINWLGSRGVPFSLVFTKADKQSKQKTIQNIRLFEREMLKTWETVPEIFITSAEKQLGKEELLEFIEGVNQASQTSEE
>NZ_CP042432.1|WP_132127786.1|131346_132210_+|UbiA-family-prenyltransferase
MKKYLSLVKFSHTVFAMPFAFIGFFLAIQNTGAKFSWVKFLLMLACMVFARSAAMAFNRYLDRHIDAKNPRTSVREIPRGVISARSALVFTLLNCLLFLAATWFINPLCFYLAPLALLIVLGYSYTKRFTALCHLVLGLGLSLAPIGAYLVITGQFALLPILFSLAVITWVSGFDIIYALQDEEFDREEQLHSIPVLLGKRKALSFSIILHGLSAAFVAAAGILGDFSWLYWTGALVYGGMLVYQHSLVKPHDLSRVNIAFMTANGIASVVFALFFLADIFLINPLQ
>NZ_CP042432.1|WP_132127785.1|132206_133907_+|M3-family-oligoendopeptidase
MSTPKRNYLPAQLNIDFETLRTFYEELLNREITSAASLERWLRDRSELEAALEEDFAWRYIKMTCDTPNESLRKDFEYFATEIEPKIAPYSDKLNRKLQGSPFREQLDKEKYFVYLRAVEKEISLFREENIPLFSQLQVEQQKYGAISGAMTVTVNEKEYTLQQAANFLKDNRRELRQEVFEKIGNRRLEDSGQLDELFDKLLQLRHQVALNAGYNNYRDYAFAAMGRFDYSPEDCFRFHEAIEKEIVPLLRRQAEKRRSDLGLDQLRPWDTEVDTSGKPALKPFQGPEELTDKSIACFSNLDPYFGACLGTMKARGLLDLESRKGKAPGGYNYPLSETGMPFIFMNSADSMRDLTTMVHEGGHAVHTFLTAGLELNAFKNLTPEIAELASMSMELLSMQHWDHFFDEKDDLRRAKREQLHDILKTLPWVATIDAFQHWLYTHPGHSAAERRSAWLEIFDRFGAGFTDWTGYEQLKGNLWQKQLHLFEVPFYYIEYGMAQLGAIAVWKNFAENPERAVAQYTAALKLGYTRPIPEIYRAAGIRFDFSAAYVRSLAAFVSGELEKIS
>NZ_CP042432.1|WP_132127784.1|134006_134336_+|hypothetical-protein
MKKKEEKRIPDEPMIREPRKPREKKETPDKNLIEAQLRNEAGDRNRTATSGKGTIEVTALSDPPLRRETRSMPRTSKAVTDALVKKPGKKKTGAAGGNTASRGRHPAGK
>NZ_CP042432.1|WP_132127783.1|134389_136318_+|amino-acid-permease
MGELFRRKTIASILREADRPHDDAERPALRRTLGVRDLIAFGIAAIVGAGIFSTIGKASADGGPAVIYLFLFTAVACAFTAFAYAEFASIVPVSGSAYTYSYVAFGELIAWIIGWSLIMEYAIGNTMVAISWSDYLTSLLSSGGIELPPWMTMDYLSARNGFQDAAILMESGKSFNQLDYSIKAAYHAWEGAPSIGGFHVVADLPALLIIWIITWLVYRGIRESRNASNTMVVVKLAIILLVIAVGVFYIDTDNWDPFMPNGLSGVLRGVSAVFFAYIGFDAISTTAEECKNPQRDLPRGMMWAIVLCTLLYIAIALVLTGMVHYDLLAVGDPLAFVFEQLDLKWLSGIIAASAVVAMASVLLVFQMGQPRIWMSMSRDGLLPKAFSRIHPRFKTPSFATIVTGFVVATPVLFMNMYVVADLCSIGTLFAFTLVCAGVLRIQSDPDAPKGKFKTPYINARYVLPLLAVALLAWAFTSNRENTLAFLKNSPQAYAPHTIITSLNNTELAQLKNNVAAADSLAFAASGNDLERYLTSLPSKEYEKRLAGFDIPAAKKYESGWKLFRHKIPAWVFFLVSLGALYYSVRKNLSLIPVLGMLCCLYMMSEMGVSNWLGFGIWLLVGLVIYFSYGIRKSRLRAQATQP
>NZ_CP042432.1|WP_132127781.1|138628_139210_+|T9SS-type-A-sorting-domain-containing-protein
MKKLYSIHYLFFLFTLVTTVVFTKVGKVSAFANPVEAFAIAGADSTLKPDPVLKDNRKNKPKIFQDPVKTYDDRQLLFFTTFGFDDYSTVAVNMKDLSVEAEKIISNFKVYPNPLYVNSQNLRISYNIKKNALVTVKMLDVLGNEVSTLFAQRVGAGSKTSEFNISSKVSGGFYFIRLSADSDHVTKKISVVQ
>NZ_CP042432.1|WP_132127780.1|139210_139738_+|RNA-polymerase-sigma-70-factor
MKPAPAITKAIFEKLFNLHYEALCRCAFRIVQDKPATEDIVQDVFLSLWNKRDTLQADAGLRSYLYKASINSSLNYLRKQKNSASRNAAFQEEVTAAGLSADQHLHHKETANRIQELINALPPACRTVFVLSRYENMSYREIAASLGISVNTVENHMSKALKFFRKYLISIFLIF
>NZ_CP042432.1|WP_158640474.1|139781_140768_+|hypothetical-protein
MELHKKEYWDLVSAYLAGTISDEERSRLLQWLEEDPARTLQLKELEKIWDRSKNNPLPAFDVEQAWKKLQPQIRERKKPVLRKVSGWSFRAAASVALLILAGTLVYFLLKPGYSDVFIATLPGETKNIVLPDGSRVVLNENSSISYDAGLDRNRERRVKLKGEAFFEVSKDPQKKFIVGAGETETRVLGTSFNVLFDDAAQQVKVSLLSGIVRFVPGRNEKAVGLAPGEEVIYNSRDRSLSKKAFENENFLFWKNRKLEFADQQLEDVLALVGESYGVSFRIKDPQLGGLRVTSAFDQSSLAEVINVLENLLDIRIEGTGNVYTVWAE

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Crispr_ID: NZ_CP042432_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_2

183279-183355

Orphan

Consensus_repeat	Method
ACCGGCACAAAATCTACCGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_2

>merge|NZ_CP042432|2|183279-183355|CRISPRCasFinder
ACCGGCACAAAATCTACCGCCGGACCCAAGCTTACCACCCGGCGCAAACCTACTGCCGGGCCCAAACTTACCACCGG

>NZ_CP042432|2|2|183279-183355|CRISPRCasFinder
ACCGGCACAAAATCTACCGCCGG	ACCCAAGCTTACCACCCGGCGCAAACCTACT
GCCGGGCCCAAACTTACCACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132127736.1\|194091_195966_+\|aromatic-amino-acid-hydroxylase	unknown	unknown	gnl\|CDD\|237598
NZ_CP042432.1\|WP_132127738.1\|191657_192779_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|238082
NZ_CP042432.1\|WP_132127752.1\|175791_177516_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP042432.1\|WP_132127737.1\|193318_194041_+\|EcsC-family-protein	unknown	unknown	gnl\|CDD\|378945
NZ_CP042432.1\|WP_132127744.1\|184304_185237_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP042432.1\|WP_132127739.1\|189933_191610_+\|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	unknown	unknown	gnl\|CDD\|274627
NZ_CP042432.1\|WP_132127755.1\|173487_173721_-\|twin-arginine-translocase-TatA/TatE-family-subunit	unknown	unknown	gnl\|CDD\|224739
NZ_CP042432.1\|WP_132127749.1\|179489_179786_-\|acylphosphatase	unknown	unknown	gnl\|CDD\|224174
NZ_CP042432.1\|WP_132127742.1\|186858_188304_-\|glycine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235240
NZ_CP042432.1\|WP_132127747.1\|181137_182223_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|223890
NZ_CP042432.1\|WP_132127743.1\|185233_186859_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP042432.1\|WP_132127745.1\|183430_184300_-\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP042432.1\|WP_132127746.1\|182295_183261_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187563
NZ_CP042432.1\|WP_132127750.1\|177999_179481_-\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP042432.1\|WP_132127741.1\|188382_189078_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|132561
NZ_CP042432.1\|WP_132127748.1\|179810_181139_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238637
NZ_CP042432.1\|WP_132127751.1\|177561_177993_-\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NZ_CP042432.1\|WP_132127740.1\|189205_189940_+\|gliding-motility-associated-ABC-transporter-permease-subunit-GldF	unknown	unknown	gnl\|CDD\|132557
NZ_CP042432.1\|WP_132127753.1\|175010_175799_-\|DUF4292-domain-containing-protein	unknown	unknown	gnl\|CDD\|372917
NZ_CP042432.1\|WP_158640476.1\|173757_174999_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|227278

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132127736.1\|194091_195966_+\|aromatic-amino-acid-hydroxylase	gnl\|CDD\|237598	PRK14056, PRK14056, aromatic amino acid hydroxylase.	0
NZ_CP042432.1\|WP_132127738.1\|191657_192779_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	9.27573e-127
NZ_CP042432.1\|WP_132127752.1\|175791_177516_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	6.17652e-28
NZ_CP042432.1\|WP_132127737.1\|193318_194041_+\|EcsC-family-protein	gnl\|CDD\|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	7.26146e-95
NZ_CP042432.1\|WP_132127744.1\|184304_185237_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.64378e-73
NZ_CP042432.1\|WP_132127739.1\|189933_191610_+\|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	gnl\|CDD\|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	5.34847e-175
NZ_CP042432.1\|WP_132127755.1\|173487_173721_-\|twin-arginine-translocase-TatA/TatE-family-subunit	gnl\|CDD\|224739	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion].	8.47946e-16
NZ_CP042432.1\|WP_132127749.1\|179489_179786_-\|acylphosphatase	gnl\|CDD\|224174	COG1254, AcyP, Acylphosphatases [Energy production and conversion].	1.41278e-29
NZ_CP042432.1\|WP_132127742.1\|186858_188304_-\|glycine--tRNA-ligase	gnl\|CDD\|235240	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional.	0
NZ_CP042432.1\|WP_132127747.1\|181137_182223_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|223890	COG0820, COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only].	7.4921e-139
NZ_CP042432.1\|WP_132127743.1\|185233_186859_-\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	8.96173e-23
NZ_CP042432.1\|WP_132127745.1\|183430_184300_-\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	9.75849e-22
NZ_CP042432.1\|WP_132127746.1\|182295_183261_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187563	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs. This subgroup contains UDP-D-glucuronic acid 4-epimerase, an extended SDR, which catalyzes the conversion of UDP-alpha-D-glucuronic acid to UDP-alpha-D-galacturonic acid. This group has the SDR's canonical catalytic tetrad and the TGxxGxxG NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.4266e-121
NZ_CP042432.1\|WP_132127750.1\|177999_179481_-\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.32949e-27
NZ_CP042432.1\|WP_132127741.1\|188382_189078_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|132561	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	9.7563e-117
NZ_CP042432.1\|WP_132127748.1\|179810_181139_-\|amidohydrolase-family-protein	gnl\|CDD\|238637	cd01312, Met_dep_hydrolase_D, Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	6.18384e-34
NZ_CP042432.1\|WP_132127751.1\|177561_177993_-\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	4.6803e-82
NZ_CP042432.1\|WP_132127740.1\|189205_189940_+\|gliding-motility-associated-ABC-transporter-permease-subunit-GldF	gnl\|CDD\|132557	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.9837e-94
NZ_CP042432.1\|WP_132127753.1\|175010_175799_-\|DUF4292-domain-containing-protein	gnl\|CDD\|372917	pfam14125, DUF4292, Domain of unknown function (DUF4292). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 243 and 287 amino acids in length.	3.7459e-38
NZ_CP042432.1\|WP_158640476.1\|173757_174999_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	5.86392e-29

>NZ_CP042432.1|WP_132127746.1|182295_183261_+|NAD-dependent-epimerase/dehydratase-family-protein
MNHVLVTGGAGFIGSSLCEHLLKDPGVKVTCIDNFDPFYPESFKRRNLSELEKNPRFKLVEQDISELGDLEVWLPDDYDAIVHLAAKAGVRPSIQQPAQYQQVNVIGTQNLLDFARIRGIKQFVFGSSSSVYGINPNVPWREEEKLMPISPYASTKLSGEMIGHTYMHLYGIRFIALRFFTVYGPRQRPDLAIHKFTRDIFQGDPITVYGDGSSSRDYTYVDDIVQGILAAVRYDQSSFEIINLGNHQGVRLSEMIETIEKISGRKATIDRRPEQPGDVPQTYADISKAGKLLNYHPKTNFEQGIRRFTAWFEENQDWLLL
>NZ_CP042432.1|WP_132127747.1|181137_182223_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MFKGTEIPYLCTVETLREKKDIRVLSLERLKEVFAEMDEPAYRAVQVYEWLWKKPVFTFEAMSNLPKSLRQRLEESYAIRAVKINTSQKSTDGTVKSSFRLHDGNLIEGVLIPAEERMTACVSSQVGCSLTCKFCATGYMERKRNLDAAEIYDQVVLIDRQARETYGLPLSNIVYMGMGEPLLNYKNVMASVDRLTSPDGLGLSYKRITVSTAGIAKMIRRLGDDGAKFNLALSLHAANDRKRNEIMPINEQNSLEALRDALKYYFAATRNPVTYEYIVFNNFNDELADAKELAFFCKHIPCKVNIIEYNPIEFADFKNTGEDKLDAFAAYLRKQGVNVNIRRSRGKDIDAACGQLAVKEK
>NZ_CP042432.1|WP_132127748.1|179810_181139_-|amidohydrolase-family-protein
MRKLTADWVFDGSRLHPGAVLVLEEDGAVADLLLSGPDTGSENADAEYMEGVLTPGFINAHCHLELSPMKGLVQKGRGLVDFILQLQRSRHFPEEEVIAAMEQAESEMLAGGIVAVGDIANSNLSFSLKHNSRLQYHTFLEVFGFDPCKAEKILSDAVRLKEAFTTGPGSGTGTASPGVHASGTPAASGFGPAPGSRAGIVPHSPYSVSRKLFELIAGQAANGSGPELFSIHNQESAEEDLFYGDGSGDFNRLYREFGIDISFFRPYGCAALAAWLPWLGESGKILLVHNTYTRAEDIALASKGSNAWWCLCPNANLYIEQRLPDIPLFVEQGLNLVLGTDSLASNDRLSILEEMKTIAGRFPGISLEQLLQWATRNGAEFFGWEHLGSFKKGKKPGVNLLSGLDGLRPGENTRVTPLVQAGRPTGETGAASQEGRWQQGSE
>NZ_CP042432.1|WP_132127749.1|179489_179786_-|acylphosphatase
MKKHLNIRITGKVQGVWFRDSTKAVANQLGITGFVRNEPDGSVYAEAEGIPLNLDQFLEWCHEGPERASVENVEVQESEVLQGFSDFVVRKKGIFGPK
>NZ_CP042432.1|WP_132127750.1|177999_179481_-|oligosaccharide-flippase-family-protein
MSVYRKFAGQTAIYGISTIAARLLNFLLTPLYTRVYQEEVYGIFTEMYAWAALINALLAFGMETTYFRYLQKHDDKQAVYSNGFLLVGALSALFLAGSFANAQGLAALMQKDLLVPAGEYTDYIRLFAWIVFFDNLAVLPFARLRAEGRAVRYSLLKFLNIAVFILLNLLLIVVVPYAIREKWAFHDTLQQLYGADWIGYVFIANLAASALTFLLLTPELLKVRFRVNLELMKKMLAYSWPILIANISFIINENISRILMGFLLPAQQGMRDLGIFGACSKLAIFLNIFVQAFRLGAEPFFFSHSAAAGARQTYAVIMRYFVIASATCFLAIITNISLLKYFIGSEYWEGLNVVPILLLGYLCLGVYMNLSIWYKLSDQTRFGFYISGLGALSTILLNIWLIPRYSYIGSAWATLGAYGFMMVLSYVLGQRNYPIPYELKKNLQYIGISIILAFLSFTVMDSNIWAGNLLLLLYVGFIYAKEQKNIKRMLNRK
>NZ_CP042432.1|WP_132127751.1|177561_177993_-|dUTP-diphosphatase
MKIRVINRSSHPLPAYETESSAGMDLRAFLEEGITLRPLERKIIPTGLFMELPDGYEAQIRPRSGLAFKSGITVLNSPGTIDADYRGEIKVLLINFSDTEFTVNNGDRIAQMVISRHETAGWEEAAELTDTTRGAGGYGHTGV
>NZ_CP042432.1|WP_132127752.1|175791_177516_-|tetratricopeptide-repeat-protein
MRIPLLIVLGIALSGTYGSAQEKPRGSAPVMRGMSEPDSMLFSNEFFAGLKAKTLGNTEAALGHFSKCVQLNPAGDAAWYELAILHYSRGAEQEALKMINNAIAMNDRQPWYLGFKADLLQKEGKYEAIVETFNRLIELQPGNMDHYYNKANALLMLSRASEALEVYEQIEAAEGPGTELTLARQRVYLKKGETDKAVEEISGLIRKYPGEARYYLILGELYDAGNRPGKALDSYKKALKIEPENGYARLAMADHYRTNGKYKDSFDELKRAFRSPGLRIDAKIKILLDNYIKPGNSLARWDQGEELAGILMAVYPRDARAYAVAGDILLQQDKQAEASNAYREAVKYEKNILLLWEQLLRLEIAQDNFQGIEKTSKEALEYFPEQADFYLFNGVANMQLGKYREAVASLNKGLELAGDSALKLQFYSNLGDAYHATGNHAASDRAFEAALQLDRSNSLIMNNYAYYLALREQHLEKAQRMSRQSISLEPGNVSYQDTYAWVLYKAGNYEEACKWIEKAIEGFPHSPTFMEHYGDILFRLGEEEEAVNMWNKAKELGGKSGLLDKKIREKELYE
>NZ_CP042432.1|WP_132127753.1|175010_175799_-|DUF4292-domain-containing-protein
MNKRYLTCFILLLLLAGGCKTRKKAVEGRADAGDRLVRKEKEVGAFHEAVQRSDLEFSWLAARGKAEIADGNRNYQVSLNLRMQKDKVIWASVTAILGLEVARAMITPDSIKFFNRLERTYVSQDLDYLREHVHPGISFALLESALTGNSPRYLMESKGQLWEMPGGYRLEGVEELFSYLLRFNQDYKVEKISIREKASGGNFNVDYHNFENRSGKWIPRSVSFTSDASEKELSIHLTYDTFSLNEPQDFPFTVPGRYKRMQ
>NZ_CP042432.1|WP_158640476.1|173757_174999_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MFKSISVIVVLLLVSLAGYGQTRAELEKRKQQLEKDIAYTQRILNETQKDKSASLEELQALNSQIRNRQKLINNVNSQINVLDNEIYGNQRQIASLREKLEKLQEEYASMVSFAFRNKNSYSKLMFIFAAKDFQQAFRRIRYLQDIGEYRRKQAGYIKETQAALNAEIEKLKNNKSRQVKLLAENEKQRDVLNQDKQQQSAVVSQLQDKEETLKEKLATQQQEARRLDAAITAAIKREIEEARRKAEAAAKARGEAPAPEVSRGSSALALTPEAKALSAGFANNRGKLPWPVEAGVIVSRFGRQEHPVLENVIVDNLGVGIKTDPGAVARAVFEGEVTSIVQIGGNLAVIVKHGEYFTVYSRLKSVLVEQGDKVILKQALGVVRTSPDEGTKVEFQLWKGTVKLNPEYWLYGR
>NZ_CP042432.1|WP_132127755.1|173487_173721_-|twin-arginine-translocase-TatA/TatE-family-subunit
MFHNSLLFLGGIGAGEIVVVSLIVLLLFGGKKIPELMRGLGRGVREFKDAQDGMKEELDDSVKKSEAKKQSAPQPQQ
>NZ_CP042432.1|WP_132127745.1|183430_184300_-|flippase-like-domain-containing-protein
MQIAPRLRKTLFTAAKLLLTAAALWFVFAKIDFQSLLAQLRTAHPLWLLLAAVFFIFSKALSSLRLNTYFRCTGLVLEEKINLRLYALGMYYNLFLPGGIGGDGYKIYLLNKHYEVPGKKLFQAVLLDRLSGLAAICSLCFLLLLFVDAPFGVKAAAIAGALLVFLVYKFMIRRFFPIFRANLAVSNWYSLAVQLAQTFCVLLIMLSLGIREEYQAYLLIFFISSVAAVLPVTIGGVGAREVVFLFGARYFGLDAHQAVAISLLFFGITALTSLCGIYFSFNTQQLLRK
>NZ_CP042432.1|WP_132127744.1|184304_185237_-|glycosyltransferase-family-2-protein
MTLSVVITVMNEEENIRPLVAAIRQALQDIDYEVIFVDDGSTDRTRQVIREEANARITLLELRKNYGQSTAMTAGIDHARGEFIATMDGDLQNDPSDIPMMLRKMLEEDCDVVAGNRANRQDGMVMRKLPSKAANFIIRNLTDVHIRDYGCTLKVFRREIASELGLYGELHRFIPVLAQLQGARIVQVDVKHHPRRFGRSKYGINRTFKVSADLMLMLFFQKYMQKPMHLFGPIGLAAFTVGALINIYLLVLKIMGHDIWGKPILILGVLLLLGGIQFITIGLIAEVTVRTYYESQGKKTYRIRRVYEGG
>NZ_CP042432.1|WP_132127743.1|185233_186859_-|hypothetical-protein
MNKLAGYLQKNPLLLAACCVALLIPAYFINLGLLPLHSDEPTRAVVSMEMIFSGDYLVSTLGGAYYYNKPPLYNWVLAAAYHLGGNFSEFVTRLPAMIPLFLFGASIYLFSKRYLGREIAALAAIFWMTNGRLLTYDSLFGHIDVLYSWLTWLGFMAVIYFDEKKKYWLLFFLTYFITFLGFMMKGLPSFLFQGITLLVFYTYKKEFRRLFSIQHITGFLFLAALLTGYFWVYSRSNSLDGYVATLWDQSIQRTVVEKSVWNSISFFLRFPFESLLHMAPWGLLVVFCFRKGFLREVMANPFLKFNLLILLGNIVVYWLSPATMPKYIFMLYPCIFTLIAYGFVRFAREAHFWRKLFDGLFILVTLALCLGTLYLPFADLGTAVIPWIYLKATVLFLLLLLLSFLVIRLPAQRILVFACVLAVFRLGFSWFSLPERFAGNGLKEQMEALQEIGRESKGNDLYFYYQPGTSSVEVHRSLYYLERERGETVALTDHVTDYDALYFSTGERVAGLPHEELRGFEYNGIRYVLVKFYPVKTGSEL
>NZ_CP042432.1|WP_132127742.1|186858_188304_-|glycine--tRNA-ligase
MQNKEQLFKNIIAHSKEYGFVFPSSEIYDGLGAVYDYGQYGAELKNNIKTYWWKAMVQMNENITGIDSAIFMHPEIWKASGHVDGFNDPMIDNKDSKKRYRADNLLEDRIAKYEKEGKTEKAAQLREQMEGFLKADNLSGLKQLIEEHEIACPVSGTRNWTDVRQFNLMFSTRMGATAGENDVVYLRPETAQGIFVNFLNVQKTGRMKIPFGIAQIGKAFRNEVIARQFIMRMREFEQMEMQFFVRPGTELEWYAHWKEARLKWHLALGPDQARYRYHDHAKLAHYANAAVDIEYEFPFGFKEVEGIHSRTDFDLSQHQEFSGKKMQYFDPELNKNYVPYVIETSIGLDRMFLSVFCNAYTEEQLENDSRVVLKFHPALAPVKATVLPLTRKDGLPDKARAIMDSLKLDFNMQYDEKDSIGKRYRRQDAIGTPFCITVDYESLENDTVTIRHRDSMEQERVPVQQLHDIIGRLVSWKTLLQ
>NZ_CP042432.1|WP_132127741.1|188382_189078_+|ATP-binding-cassette-domain-containing-protein
MIEVQELTKRYGKQLAVDHISFGASGGSVVGLLGPNGAGKSTTMRMLAGYIPPSSGTAKINGYDVVRQSMLARKSTGYLPENNPLYPHMYVREYLGFMGALHGMNRKKQRIEEVIGLTGLGPESHKKLGQLSKGYRQRAGLAQALLHDPPVLILDEPTSGLDPNQLSGMRQLIRDLGREKTVILSTHIMQEVELLCKDVLIINKGKIVADDELKALTAVRSLEEVFRELTR
>NZ_CP042432.1|WP_132127740.1|189205_189940_+|gliding-motility-associated-ABC-transporter-permease-subunit-GldF
MKVLAILRKEINEFFSSLTAYITVSLFLVTMGLFLWVFPDTSILEYGYASLESLFSVAPWVFIFLLPAITMRFFAEEKRMGTYELLATAPVSHWQVILGKFLAGILLILFCLLPTLVYYYTVYQLGAVKGNLDSGAIAGSYIGLLLLGTAFCAIGLFASTLSSNQVVAFLLAVFLCFFSWSGFDSISRMTSLGAIDFFLVQLGMYEHYQSLSRGVVDTRDLAYFGSFTLFFLLLAKLRLEGRKW
>NZ_CP042432.1|WP_132127739.1|189933_191610_+|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG
MVKRSLRNLLLWTILLIAGNIILFRNFTRFDLTADKRHTLSETTRQLLGKLEGPLVIRVFLEGDLRTDIKRLQSAASDLLDEYGAWAGGNLHVEFIDPLETADGGEGNAAYEELAEAGLEPTSLNIRREEGTLQKIIFPGALLYYQGKQLPVNFLGTHFQTRSSAESIHIAIQNLEFHFSNAIEKLLSGEREKLGFLSGHGELDGRRIIDITGTLNRAYDVKQVNLKEESLSGLDTYAALILAKPLEAFSESEKYKLDQYLMHGGNLLIFIDQFNASLDSMRARGNMLALPLDLNLDDLFFRYGFRINYDLVRDMNCAPIPVVLQTGAQGNQQLMPWVYFPLIFPRSPHPVVRNIDPIRLQFASSIDTIASEGVRKTILLKTSPYTQKAAAPVYLSLEAIQEAADPKAFNSGEVPVGVLLEGTFTSAFTNRGRELFDQSLPFREKSREARIIAIADGDLPANEISAIDDSYFPLGYDKYTRQTFGNKTFVQNCVDYLSGKAELLQLRRKEMGLRMLDRQQAAVESMRWKLINTALPVGLVLLFSLTYNSLRKQKYGRR
>NZ_CP042432.1|WP_132127738.1|191657_192779_+|DNA-polymerase-III-subunit-beta
MRFIVSTSALLKHLQAISGALSSNTVLPILENFLFEIHDGSLRISATDLQTSMSTNLQVEARDSGKIAIPSRILIDTLKTLPEQPVTFTINNETHAIEISAGEGKYKLAGEDGDDFPKIPVIENASSISLPADVLTNAITKTLFAVSNDELRPNMTGVYCQMAGGEIIFVATDAHKLVRYTRKDVSSEAASSFIIPKKALTLLKNTLPDDDSTVSIDYNASNAFFRFGQLHLICRLIDEKYPDYEAVIPANNPNKLTLDRSQFLNCLKRVVIYSNKTTHQVRLKISGSELSISSEDPDFANEAYERLTCQYEGEDMEIGFNARFLIDMLATLDSDEVVVEMSTPNRAGLIIPTNQDEQEDILMLVMPVMLNNY
>NZ_CP042432.1|WP_132127737.1|193318_194041_+|EcsC-family-protein
MNTYEEQALRQLGKWQADMQAHPSFTSKVSGNIQGRINRAIPEKVHEVITTSIRQMTRAVFYGAGFANPKPLKNASLRVREHRVQGRIRFYRNAATAEGALTGAGGILLGLADFPLWLALKMKLLFEISALYGFDVSDYRERLYMLHIFQLTFSNQQQRNKVYATLADWEGYLQSLPQDINAFDWRSFQQDYRDYIDIAKLIQLIPGIGAVAGAYVNHRLTEKLGDYAMNAYRLRLIPKQ
>NZ_CP042432.1|WP_132127736.1|194091_195966_+|aromatic-amino-acid-hydroxylase
MNDFNNPVLKKLPAHLRQYLVEQHYENYTPIDHAVWRYVMRQNYSYLKDVAYYPYIPGLKKAGLSIERIPNLQTMNDHLRKLGWGAATVKGFIPPAAFMEFQACRVLVIAADIRQIGHIEYTPAPDIIHESAGHAPIIADPDYAEYLRYFGEIGARAIFSRKDFQLYEAIRRLSVLKEMPAADPREISKAEEELAERQRSLGQPSEMALLSRLHWWTVEYGLIGTLENPKIYGAGLLSSIGESVTCMQPSVKKLPYTIETVNYPYDITQPQPQLFVTPDFENLLNVLEHFAGSMAFRRGGLEGILKAVECGETCTVVYSSGLQVSGVFRDVDVDGLVYIQTSGPSALATDGKQLPGQGPSVHPGGYGSPVGKLKGYSIALEDFSPGELKSIGLERGKFAKLEFENGLWLEGLPQATEYRNGKLILISFTDCTVKDGKTGKLLFEPSMGKYHMGVGEKILSVFYGPADREAFDRELKAAGAGKKPAAGETLAGENSAAGEIRGAGDMPGAREGSGKAGKAGGGNVHHGQGRLGELYQKVRDVRERRLDATALPKLWQELKERFPADWLCALEILEILESDGIFKDIATEIASWLEQKSVREPALAKLISDGLAVMRQPGIEALTR

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Crispr_ID: NZ_CP042432_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_3

323441-323661

Orphan

Consensus_repeat	Method
GCAGCAGCGCAACCGGAAGCGGCGGCACCAGCAGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP042432_3

>merge|NZ_CP042432|3|323441-323661|CRISPRCasFinder
GAAACAGCACAGGCGGAAACAGCGGCACAGGCGGGAATTATTCATCCCACAGCCCCCCCGGCAGATCTGGTGCAAGCGGCAAAGGCGCAAGAGGCTCCCCCTGCAACACCGGCAGCAGCGCAACCGGAAGCGGCGGCACCAGCAGCGACGCCCGGAACAGCGAAACTTATGCCGGCGCAACCGGAAGCAGCAGCGCAACCGGAAGCGGCGGCACCTGCAGC

>NZ_CP042432|3|3|323441-323661|CRISPRCasFinder
GAAACAGCACAGGCGGAAACAGCGGCACAGGCGGG	AATTATTCATCCCACAGCCCCCCCGGCAGATCTGGTGCAAGCGGCAAAGGCGCAAGAGGCTCCCCCTGCAACACCG
GCAGCAGCGCAACCGGAAGCGGCGGCACCAGCAGC	GACGCCCGGAACAGCGAAACTTATGCCGGCGCAACCGGAA
GCAGCAGCGCAACCGGAAGCGGCGGCACCTGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132127635.1\|338355_338841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132127640.1\|327244_329131_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|369630
NZ_CP042432.1\|WP_132127911.1\|319066_319555_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132127648.1\|318452_318956_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_158640486.1\|320990_322385_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|376360
NZ_CP042432.1\|WP_132127910.1\|334035_334635_-\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP042432.1\|WP_132127649.1\|317510_318125_+\|PorT-family-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP042432.1\|WP_132127652.1\|310786_312139_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP042432.1\|WP_132127645.1\|322377_323220_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132127639.1\|329161_332641_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132127638.1\|332832_333993_-\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042432.1\|WP_132127636.1\|337007_338330_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP042432.1\|WP_132127641.1\|326007_327207_-\|DUF4959-domain-containing-protein	unknown	unknown	gnl\|CDD\|374513
NZ_CP042432.1\|WP_132127643.1\|324094_324673_+\|non-canonical-purine-NTP-diphosphatase	unknown	unknown	gnl\|CDD\|237823
NZ_CP042432.1\|WP_132127912.1\|312131_312719_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP042432.1\|WP_132127650.1\|315438_317418_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|223101
NZ_CP042432.1\|WP_132127647.1\|320018_320987_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP042432.1\|WP_158640487.1\|334710_336990_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372475
NZ_CP042432.1\|WP_132127651.1\|312799_315223_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376626
NZ_CP042432.1\|WP_132127642.1\|324873_325989_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379841

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132127638.1\|332832_333993_-\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.03896e-18
NZ_CP042432.1\|WP_132127641.1\|326007_327207_-\|DUF4959-domain-containing-protein	gnl\|CDD\|374513	pfam16391, DUF5000, Domain of unknown function. This family around 200 residues locates in the C-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.	1.66892e-54
NZ_CP042432.1\|WP_158640486.1\|320990_322385_-\|peptidylprolyl-isomerase	gnl\|CDD\|376360	pfam00639, Rotamase, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	5.37351e-29
NZ_CP042432.1\|WP_132127910.1\|334035_334635_-\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	4.86907e-44
NZ_CP042432.1\|WP_132127651.1\|312799_315223_-\|hypothetical-protein	gnl\|CDD\|376626	pfam01835, A2M_N, MG2 domain. This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin.	1.67049e-08
NZ_CP042432.1\|WP_132127652.1\|310786_312139_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	0.000521976
NZ_CP042432.1\|WP_132127639.1\|329161_332641_-\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP042432.1\|WP_132127636.1\|337007_338330_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	2.25985e-66
NZ_CP042432.1\|WP_132127640.1\|327244_329131_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|369630	pfam07980, SusD_RagB, SusD family. This domain is found in bacterial cell surface proteins such SusD and SusD-like proteins, as as well RagB, outer membrane surface receptor antigen. Bacteroidetes, one of the two dominant bacterial phyla in the human gut, are Gram-negative saccharolytic microorganisms that utilize a diverse array of glycans. Hence, they express starch-utilization system (Sus) for glycan uptake. SusD has 551 amino acids, and is almost entirely alpha-helical, with 22 alpha-helices, eight of which form 4 tetra-trico peptide repeats (TPRs: helix-turn-helix motifs involved in protein-protein interactions). The four TPRs pack together to create a right-handed super-helix. This is predicted to mediate the formation of SusD and SusC porin complex at the cell surface. The interaction between SusC and TPR1/TPR2 region of SusD is predicted to be of functional importance since it allows SusD to be in position for oligosaccharide capture from other Sus lipoproteins and delivery of these glycans to the SusC porin. The non-TPR containing portion of SusD is where starch binding occurs. The binding site is a shallow surface cavity located on top of TPR1. SusD homologs such as SusD-like proteins have a critical role in carbohydrate acquisition. Both SusD and its homologs, contain about 15-20 residues at the N-terminus that might be a flexible linker region, anchoring the protein to the membrane and the glycan-binding domain. Other homologs to SusD have been examined in Porphyromonas gingivalis such as RagB, an immunodominant outer-membrane surface receptor antigen. Structural characterization of RagB shows substantial similarity with Bacteroides thetaiotaomicron SusD (i.e alpha-helices and TPR regions). Based on this structural similarity, functional studies suggest that, RagB binding of glycans occurs at pockets on the molecular surface that are distinct from those of SusD.	4.98693e-53
NZ_CP042432.1\|WP_132127643.1\|324094_324673_+\|non-canonical-purine-NTP-diphosphatase	gnl\|CDD\|237823	PRK14823, PRK14823, putative deoxyribonucleoside-triphosphatase; Provisional.	2.4512e-104
NZ_CP042432.1\|WP_132127912.1\|312131_312719_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	1.20614e-31
NZ_CP042432.1\|WP_132127650.1\|315438_317418_+\|dehydrogenase	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	1.1178e-139
NZ_CP042432.1\|WP_132127647.1\|320018_320987_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	7.90411e-92
NZ_CP042432.1\|WP_158640487.1\|334710_336990_-\|hypothetical-protein	gnl\|CDD\|372475	pfam13100, OstA_2, OstA-like protein. This is a family of OstA-like proteins that are related to pfam03968.	2.52554e-38
NZ_CP042432.1\|WP_132127649.1\|317510_318125_+\|PorT-family-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	2.07514e-23
NZ_CP042432.1\|WP_132127642.1\|324873_325989_-\|hypothetical-protein	gnl\|CDD\|379841	pfam16389, DUF4998, Domain of unknown function. This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.	1.38531e-67

>NZ_CP042432.1|WP_132127645.1|322377_323220_-|hypothetical-protein
MRNVCSWAFLVVIVSCSSARKEELPVARVYQEYLYPSDLEGVVPADVKGADSVQIIRSYIDNWVRQAVILHKAEQNIAVNEMDFQKQVADYKNSLMIYYYEQALVNEQLDTLITENEARAYYDENKENFLLSRDVYRVAYAELAANAPDLLDIKEKLLDPSPETISELTRYCLLHARSFSFADTSWYSFRELSAFLPADSVGEMNVSPGRVFEIKNKNTVFLIAFRELRKKDSISPYGMERQNIRHLILNQRRLDLLSEMENEVFNEALQNNEFEIYSNE
>NZ_CP042432.1|WP_158640486.1|320990_322385_-|peptidylprolyl-isomerase
MNKIFLLLAGMIAGTAAMAQESSIDEIIAVVGDKIILKSDVENQYALYLRENQTPNEAIKCTILQGLLSQKLLVAQAEIDSLAEKNANFPAQVEAELDKRVQFFVRSYFGGSVAELERFYGKPLLQLKEEFREQIGDQMKAELMQMEITAGLDVSPADIRKYYNSVPPDSLEIYNTEVEVGQIVIYPKVTEAQKMVARTRLAALRAEIQAGEDFERLAIVNSDDPGSASSGGDLGFVSRGQMVPEFEAAAFRLKEGELSQIIETEYGFHLIQGIERRGEQIHVRHILIKPEYSKVELDSARKLLAEVREKILVDTLSFAAAAVEYSDDELTRGNGGIFAPQGRQGFNMIPLDKINEYTGDAGIFNIIDTMEVGQISKPLVYVNQQTGEQGYRIVYYKSRSEPHRASLETDYPRLRNAALAVKQEEVVEEWFKDKITEQYVRIDESYQSCESLQHWLRASAQFEN
>NZ_CP042432.1|WP_132127647.1|320018_320987_-|MoxR-family-ATPase
MTVPFSSDVAGITALNEACARAKKEIGKMIVGQDAIVESVMIAIFCNGHCLLVGVPGLAKTLLVQTVARVLDLSFNRIQFTPDLMPSDITGSEILDEERHFRFVKGPVFANIVLADEINRTPPKTQAALLEAMQERAVTVGGKQNRLEQPFFVLATQNPIEQEGTYPLPEAQLDRFMFNIFLDYPTFEQEVQVVKNTTANQVQDLQKVLNAEEIIAFQQLVRSVPVTDHVLEYAVKLASKTRPGTFLASEDVNNYLTWGAGPRASQYLVLGAKCHAAIKGKYAPDIEDVQAVALPVLRHRIVRNYKAEAEGITIEEIIQKLL
>NZ_CP042432.1|WP_132127911.1|319066_319555_+|hypothetical-protein
MKKTLLVLTIAVLGSCFLASESQAQDYKNAIGGRFGTANGLTFKHFFNSNGALDLILNIRDHNAHDHFYLVGLYEVHNPIPNAGGLNWYYGGGAHIFFVDHDHDGPDDDVDGGFGIDGVLGLDYKFNGAPINLSLDWKPALDIAPDTDGDLGWFGLSIRFAW
>NZ_CP042432.1|WP_132127648.1|318452_318956_+|hypothetical-protein
MKKLIMSACIAGALFAANGVTAQDAPGLRLGNIGFETGFSLEDGFTIPLGGTFKFETPISSQLHGTATAGYISVQGDEIEGFEIPSYDYVPLKAGLKYYAAGNFYVDGEIGAGIGVSDGSETKFLWAPGVGYQFPVADNKFVDLSARFENVGELSNLGIRLGYSFNL
>NZ_CP042432.1|WP_132127649.1|317510_318125_+|PorT-family-protein
MKKHLLLFAIACMAFGISTSYGQATFGVKAGANLANANFDTGSSLSVKPDAIIGFYAGPTARFDVSSRFAIQPELLLSLQGFKWEFDFETGGEDVGFDATFQNLYLNLPVMARFSATEALHLEAGPQVGLLLSSKVKNEDVSVDWEENNELDFGLNIGAGYQLPMGLSVEARYNFGLANIFGDMEDDNTSVTNRVLSLGLGYTF
>NZ_CP042432.1|WP_132127650.1|315438_317418_+|dehydrogenase
MNRQEYMDTAFFRKVCQLLLRPRLIEEKMLVLLRQGRLGKWFSGIGQEAIAVGAAMAMQENEYILPMHRNLGVFTTRGVPLKRLMSQFQGKMNGFTQGRDRSFHFGSREHRLVGMISHLGPQLAIACGIALADKLSGKGQATLAFTGEGATSEGDFHEALNLASVWDLPVIFLIENNGYGLSTPVSEQYRCQSLAGRAAAYGMEGIQIDGNDVLSVFDTVKKAREYCIREQRPYLIECLTFRMRGHEEASGTGYVPASLLEEWAARDPIAAFERFLREERIMSPQELDSLKSSLREEINADVKASLEEEPGITASAETELADMYAPAAPRDVLSGTDKISKKRFIDALSDSLRLAMQRNPDLILIGQDIAAYGGVFKVTEGFLEEFGRERVRNTPLCESAVIGAAYGLSIAGYRSVVEMQFADFISMGFNQVVNNLAKSHYRWKQPASLVIRMPTGAGTGAGPFHSQSTEAWFIKTPGLKVLYPAFPSDAKGLLLAAVEDPNPVLFFEHKYLYRQLSDEVPEGYYTTPIGKARLVREGRDVSIITYGLGVHWALEVLGRHPEIAADLLDLRSLLPWDKEAVSATVKKTGKVLVLHEDTLTGGFGGEISAWIAEHCFRDLDAPVIRCCSLDTAVPMNPLLEANFLAKSRLEDRLLQLLAY
>NZ_CP042432.1|WP_132127651.1|312799_315223_-|hypothetical-protein
MKKPLTLFFFAAVFTLGALAQENPQDSLFQEKLLTPYGKYFELPSEGIYTHFNKSAYMTGEGVWFKIYLLDTREKRPFDLMQNVYAELFDPQGNPVRRQVLFAEKGAASGMIHLADTLAPGIYTFRAYTNWMRNMDEGNFYTRTFRVNGGVQKSGEGPAGDEAGEAPGGFSSGARESAYDISFFPEGGHLLAGIVNTVAFKITGPSGKGAALDGLLKSGQGDTLLKLSGGKWGMNSLQLNPQPGERYYAEFFLPGENGGVQTVELPPVEEQGIGLSAQWFFPEKASILVRTNAASLPGLNGKKFYLLVHNQGKVARMLIVNWTNRPVLKIDMDKSLLLKGINHVTLFNEQFQPVADRMIFNRRKEQLGQISIDSRLEGDSLAFSLIAEDSSSEPLEADLSISFLPAQTGLANFETSIYAALLLESDIKGNIEYPAWYFEEEEDFERIKGLDHLLLTQGWRSYDWEAISKGSRPAPVHEFEQGFTIRGKVLNSISRKEMEQSQLSVFSPENGLMTVVDVDSSGAFILPNVFLMDSTRVIINATNAKGRSGFRELEAKITEPRYEKNPPPLPLRDPEAPVKNTASLILPEGSELLEGVTVTGQAIDKEASPFAGSTYFSNINDRVVVITKDNYFQYNSLRDLLMKEFNIMGNSMGRGGGAPVLIVDDMPMEDLSWLDMIHISEVEAVAVNKSGNAMLGQRGAGGSINIKTRTQQVDWGPRRELNIVNMLVKGFSAPVAYYAPKYEVPATDPAFRERAAVYWKPDAKSDFSGRSVFKVPVPSGIDSLHVRTEGISSTGVLIVDDRVIRVK
>NZ_CP042432.1|WP_132127912.1|312131_312719_-|RNA-polymerase-sigma-factor
MLMDNLVKGCLEQNRSSQKALYRQYFGYSMSICLRYAPNREEAVEIVNDGFMKVFTRIGTYDPKRSFKSWLGRIMVNSSIDHYRAAHKHYHHDGLDSALEAEFPVSVIDKLSYDELIGLVQQLPSSYRTVFNLHVIDGYKHEEIADMLSISVGTSKSNLFKARESLKLKIRQQLRPVSPGRPDRMMITSIKLKNG
>NZ_CP042432.1|WP_132127652.1|310786_312139_-|outer-membrane-beta-barrel-protein
MDKWDQEFESKIRKKLSEGRVDFDETAWERMEQQLAERKGRRRLIPLWWLRAAAAVLLAGLGVWAYTGYFRDAGDKTRDIPSLAGNRPPANGELPPVSGEEQPGTKVLPAAPVEEPGASAEGRAEPGKGPVTAAEQRPAAGEQHPAPEDSRPVAGKTPQLTKELAGADLKPNTGEEMQERERWLAAKRERGLDVKGLSSGLALSAAAAPALAADFSGGHKQSGTASISAAGNGVPESGGTDASGTRLPVSGKKGITFSLGLLAAPDLNGVVNFNEGKLGVNMGLGLGVHFSERLSLHTGVVYSQKPYNARPSDYHTGYSPRDLVNIAANCNVIDIPLNLRYTVYRKGLNSISLNAGLSSYLMLREQYEYEYSSAEPRLYEYHNENQHFMGVGNAGLTLERKISDKMSIGLTPFIKVPLTGIGHGGVRLISAGAAVGLTLDMSKKQNTRNK
>NZ_CP042432.1|WP_132127643.1|324094_324673_+|non-canonical-purine-NTP-diphosphatase
MPEKKLVFATNNLHKLEEVRQMLGPEFTLFSMKEIGCKEDIPETGSTFRENASIKARYIHERYGLDCFADDSGLEVDALGGAPGVFSARYAGSHGNAAANIDKLLRELKDKDVRSARFRAVIALIVGGNEHFFEGTVNGSIRPGRSGEGGFGYDPVFQPEGYDITFAEMKPEEKNRISHRGRAIEQLIAFLT
>NZ_CP042432.1|WP_132127642.1|324873_325989_-|hypothetical-protein
MKKTINYILILLAAGWMMSSCEEADSTYKEFIVEGGLVYPGRATSPLAHSGKHKVLLTWLRGTDPSVTSAKVFWDNYTDSVSVPIPANADTISVLIDNLVEKPYSFQIVTYDDKGNVSVPVELLTAAYGDKYQASLLSRPVDLTVSSIDGTLSLQWGSPDIANGAIASELKYVNADDETITMRIPAEINESSVTGLKPGTGFTYRTIFLPDSLSIDTFYTEFRENDSFIFDKEDWEIIDFSSQHGGAANTVENVIDGTDGTRWHSHSGPSSYPHHVTIDMGAERTVTEFAVWRTTFENGGDDRAPDKIQFLVSPDNVTWTDLGIFDFNRFINGEQLFQMPEGTKARYFKLVGVEGPNDTNFVLGEISAYGL
>NZ_CP042432.1|WP_132127641.1|326007_327207_-|DUF4959-domain-containing-protein
MMNINRILLVFLGSLLVFSGCKEESRIDYIDDSMPAPAQVSNVEIVETPGGAIVTYDLPDDPNLAYVKAIYDIRPGITREAKASLYTDTLKLVGYGNTDPHQVSIFTVGKNEKMSEPLTRSFTPLTPPIKETYEALEVVETFGGVQIRFENESKADLSIVLMADTAGTGTMEPVYTLYTAAPEGVFAVRGFDTLETEFQAFVRDRWNNKSDTLSRVLKPIYEQEIPKSTWAAVHLPTDTWKPAESYHLHHLWNNNIVGYAGTIFASTNSSILPQWFTIDLGVSAAISRIVVHQSEPGGHFYKGSGPKRWEIYGSNNPANDGSWESWTLMGTFESFKPSGLPMGQENDEDKQYGWTNGEDCTFIERQPPYRYLRFKTLETYGSSGQVVMAELDVWGQLAE
>NZ_CP042432.1|WP_132127640.1|327244_329131_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKTYKILTLTVLVLLGSLSSCKQYLDVVPDNVATIDNAFANRHEAEKYLFTCYSYLPRNGDLGDDPGMVGGDELWRFANEGGFFSLAKGLQNIVGPLGGRWGTYFRAIHDCNIFLENIGRVADIEQTERDRWIAEVTFLKAYYHFTLVKMYGPIPLLKENVSTDVSADMAQVSRDPVDSCFNYVVQLIDEAAAALPAVINDPAKEMGRITRPAALSIKALALVTAASPLFNGNADQAQLINPDGTVLFNQQYSDAKWEAAALACKEAIDACEAAGMKLYEYLPAFNQYSLTDTIMTQLSIRNSITERWNDEIIWGNTMSWSAGLQALVTPRMDPTNLDITAIHGVLSPPLRMAELFYSDNGVPIAEDKEWNYEGRYDIRTAGVGDKLYIRNGYTTASMNFDREPRFYATMGFDGGVWYGQGRYDDKKDVDLFYLEAKYRQRNGFGKPGFASVTGYFLKKLVHYQNVIGTGNSYSINNYPFPIMRLADLYLLYAEALNEWQGPGPAVNEYVDRVRARAGLEPVASAWSNYSTNPSKPGSKTGMREIIHQERMIELAFEGKRFWDIRRWKTAADILNTPIRSWDIQQINAKDYYRPTVVFNLSFGLKDYFFPIRESDIDNNRGLVQNLGW
>NZ_CP042432.1|WP_132127639.1|329161_332641_-|TonB-dependent-receptor
MNFNLFPKARLFPGLPSNVLLVMKLTVFLAIITLTQVSASVYSQRITIDAKNVQLETVLEKIRQQSGFDLFYDAEDIRNAGRISINVTGVSVEEALKSCFAGQDLSFKVIENTIVIKGKEDFAKDKGVSAPEYEMRLARDISGTVSDSISTLPGVSVTIKGTNIGTSTDQNGKYILNVPDDNAILVFSMIGYLTQEIPVAGKQIIDVKLQADMQGLDEVVVVAFGKQKRSDMVGSVVSVNPADLKVPSSNLTSALAGRVAGMIAFQRSGEPGMDNADFFIRGVTTFGYKKDPLILIDGIELTTTDLARLQVDDIASFSVLKDATATALYGSRAANGVILVTTKEGAVGKAKFSIRMENSISAPTRNVELADPVTYMIMANEATLTRNPLEAVLYSDRKIENTASGNNPLAYPTNDWRAQMFKEYTMNQRANMSVSGGGGVARYFVSGSFNQDNGLMEVDKRNNFNSNIDLKSYSLRSNVNINLTKTSELVVRLHGMFDDYTGPMEGGAQMYRRVMRANPVLFPAYYPIDEDHEHVKHIMFGNFEEGNYINPYADMVRGYKEYSSSLMLAQLELKQDLGFLTEGLSFNGMLNTHRRSFFDVRRFYNPFWYVPAGFNPQTGAYSVTNVNPDGGTDYLDYDEGGKDISTTFYAESRVNYNRTFAEKHGVSAMLVFMAQQRLNANAGDLQRSLPSRNLGVSGRMTYDYDNRYYAEFNFGYNGSERFDEDHRFGFFPSAGLAWTASNEDFFEPVKSVVSNLRIRATYGKIGNDAIGRPEDRFFYLSNVNMNNGSRGAAFGQDPGVQYRLNGISISRYANPGITWEIATQKNLALEIGLFDKANIIAEVFSQDREQILMNRASLPAELGFAAEVRSNVGSASAKGVDISLDYNHSFGNGIWVQSMGNFTYATSQFEFYEEPKYEEWYRYHKGNSLNQNYGYIAERLFVDDQEALNSPRQNFGEYGGGDIKYTDVNRDGQITAADRVPLGHPTVPEIVYGFGFSAGYKSFDVSAFFQGLANESFWIDPAATAPFARYVYDGEAVPANQILQNQVLKAFADSYWSEDHRDVYALYPRLSSTLNSNNAQTSTWWMRNGSFLRLKQVEIGYTLPARVLERLKASTFRIYLNATNLVNFSSFSLWDVEMGGNGLGYPIQRVFNIGLDLTI
>NZ_CP042432.1|WP_132127638.1|332832_333993_-|FecR-family-protein
MTNKEAKELVRKYRAGNCTEEEKALLNAWYLSLASGNGQTPAREEIEKALKDVSGSLPLKKYYFIRSLQLGQIAAAVLVLFLFSASIYFLREQRPASGFSGNIYKNDVAPGGNKAVLELADGSVIDLNNAAIGSIDHKGPVRITKTREDQVIYQPALEKGKVAEMRYNTIRTPRGGQYQVVLPDGSGAWLNSASSIRFPAMFTDGERKVEITGEVYFEVVRKYRLSDTGKVVIPFIVVASNQRIEAIGTQFNINAYPGEGAIRTTLLEGSVRISLPAGSKFRLLKPGQQAQIGLDPSRSISISQANVEKIIAWKNGQFQYDMEGIETIMRQVERWYDVEVVYEGEIPEKKFVGTISRNISLSKFLDILSYTGVNFRIEGRKIVVMS
>NZ_CP042432.1|WP_132127910.1|334035_334635_-|RNA-polymerase-sigma-70-factor
MRAYCNCGDKELAQLLKEGDKAAYTELYNRYKGLLYVHAYRILQDKEEAKDVIQDLFIVLWTKREELNYRGGIASYLYASARNRVFDRIARKKVASSYFESLKDFAGHYECSTDKQLEEKELAAIIEKEISALPLKMREIFQLSRMENLSHKEIAEQLIISDKTVKKQVSNALKILRLKLGAFLFIIHLLPLTMLTVIY
>NZ_CP042432.1|WP_158640487.1|334710_336990_-|hypothetical-protein
MKLRLFIVILCCCFAALLKAQDTTTTIRVLDSDYLVAEEDRSWIINGTFEHEDATMQCDSTFFNQQNNTLEAYGDVFIRQDDTITVRADRLFYDGTTRMARFYENITLSDGQAVLTTNFLTYDLVTREGTYNNGGQIVNQRDTLNSRKGYYFVGSKDAYFRENAIVNTPDALIKSDTLRYNTGTKTAYFYGPTTIEGEDDFIYAENGTYNTGTDQAHFQENAYYRSGSHLLRGNELYYDRKQNFGRAIEDVFIIDTIENIILRGELGEYNKATETAFVTDSAQVIMIAEQDSARNDTIYMAADTLMTRLLPVPLIKEWIAASYERDVLGKDIPVPEMLRTAPGIPSAGDSTQFLSGDSTLLEAPGLPDAADSLGRRLNGRDSLVSDSARIALSAEGVIPSNDPARQDSLPARDALQDSLPARDRLVQPGNPARQEDTIPRQDSLPQQDSLLTEAEVAANAAKPSPRFIGPPPLKPSDYLPRAVADSLSRALAAADSLKNLPADSVVLPVDSARVLFAFNRVRVFKSDLQAISDSLVYTSVDSVMRVYKTPVVWSEGSQMSSEFMTITMRHKKVDRLNMYRSAMIISEAETDSSRYNQMSGKEMTGFFTEGALTRLVVEGNARTIYYVPEDSVGTLGINYAENSRTILYFKDNELEVVELLKDAEQITYPEGDPEAITRLEGFHWRQNERPRDKNDIFRIVEPSPPPPAPEEKAPKALQAGSSGTRSSGTTVSPVPPSSVPPSSVPPSSVPPSQAQPDEE
>NZ_CP042432.1|WP_132127636.1|337007_338330_+|tRNA-lysidine(34)-synthetase-TilS
MLERFLKYIREEDLCKGGDRVLLAVSGGMDSMFMYALFSRSPFSFGIAHCNFGLRGEESDEDQMFVKQEAGKSGVPFYTVRFKALDYAREHKLSTQMAARQLRYDWFETLRREEGYQAIAVAHHLNDQVETMLINLVRGTGPAGLHGILPKNGKIIRPLLCFTREEIAAAVNREAIPYREESSNASDKYLRNRLRHQVVPVLKALNPGLEHTFAATARHFLEAEQFIEHHMEPYRALLQKEGESFRISCKALPEPGMGETILYQLIKPFGFAAGQSRDILNACQSQPGKQFFSATHQLIKDRGYLIIIPLQNTSGQGLLQNEALSFEKMFEAEILRAEDAGTSPGAGTAFLDYEKLQLPLTVRYWQDGDRFHPLGMKGSKKLSDFFVDQKIPLHLKGRIPLLLSGKEIAWVAGYRIADPFKVTEGTKKVYRIKFNSRKIN
>NZ_CP042432.1|WP_132127635.1|338355_338841_+|hypothetical-protein
MEETFLFREKQYLGRNSYWISRRMVLAAFCFLVYFLEKEGRNAELLLIVGISITVISVLLLFIVHFKTSVYPDAIELDGFWSTRKVKIGFDSILKAEKIPYSRFMLNNPVYNLHKKGTIRFYTRGKEAVKLTDKDGLEYIIGSQLAAELLAAVKKAMATAR

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Crispr_ID: NZ_CP042432_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_4

1580810-1580916

Orphan

Consensus_repeat	Method
CCTGAGGTGCCGCGGCCCCTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_4

>merge|NZ_CP042432|4|1580810-1580916|CRISPRCasFinder
CCTGAGGTGCCGCGGCCCCTGGCCTGTGGTGTCCCTTAGCTGCCGCGCCGCTGACCTGCGGGTACCACCTGCTTGTGGTTACTCCTGAGGTGCCGCGGCACCTGGCC

>NZ_CP042432|4|4|1580810-1580916|CRISPRCasFinder
CCTGAGGTGCCGCGGCCCCTGGCC	TGTGGTGTCCCTTAGCTGCCGCGCCGCTGACCTGCGGGTACCACCTGCTTGTGGTTACT
CCTGAGGTGCCGCGGCACCTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132130063.1\|1592784_1596006_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132130066.1\|1585168_1587454_-\|cytochrome-C	unknown	unknown	gnl\|CDD\|379104
NZ_CP042432.1\|WP_132130141.1\|1563998_1565417_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|226195
NZ_CP042432.1\|WP_132130140.1\|1590051_1592355_-\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872
NZ_CP042432.1\|WP_132130074.1\|1571972_1573163_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP042432.1\|WP_132130075.1\|1570149_1571958_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP042432.1\|WP_132130069.1\|1581921_1582899_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_CP042432.1\|WP_132130077.1\|1565531_1566566_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380632
NZ_CP042432.1\|WP_132130064.1\|1588563_1590033_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP042432.1\|WP_132130078.1\|1562655_1563885_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP042432.1\|WP_132130068.1\|1582902_1583472_+\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP042432.1\|WP_132130071.1\|1578396_1580757_+\|DUF255-domain-containing-protein	unknown	unknown	gnl\|CDD\|226685
NZ_CP042432.1\|WP_132130079.1\|1562015_1562654_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP042432.1\|WP_132130067.1\|1583538_1585074_+\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|223679
NZ_CP042432.1\|WP_132130070.1\|1580986_1581529_+\|CHRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377837
NZ_CP042432.1\|WP_132130072.1\|1576611_1578312_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP042432.1\|WP_132130073.1\|1573197_1576596_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132130065.1\|1587484_1588513_-\|6-bladed-beta-propeller	unknown	unknown	gnl\|CDD\|271328
NZ_CP042432.1\|WP_132130076.1\|1566751_1570135_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132130062.1\|1596017_1597499_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130063.1\|1592784_1596006_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	8.95971e-178
NZ_CP042432.1\|WP_132130066.1\|1585168_1587454_-\|cytochrome-C	gnl\|CDD\|379104	pfam13287, Fn3_assoc, Fn3 associated.	1.28227e-11
NZ_CP042432.1\|WP_132130141.1\|1563998_1565417_-\|alpha-L-fucosidase	gnl\|CDD\|226195	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism].	2.31883e-74
NZ_CP042432.1\|WP_132130140.1\|1590051_1592355_-\|DUF1553-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	1.48186e-120
NZ_CP042432.1\|WP_132130074.1\|1571972_1573163_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.68142e-57
NZ_CP042432.1\|WP_132130075.1\|1570149_1571958_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	2.87423e-21
NZ_CP042432.1\|WP_132130069.1\|1581921_1582899_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	2.35106e-160
NZ_CP042432.1\|WP_132130077.1\|1565531_1566566_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|380632	cd19977, PBP1_EndR-like, periplasmic ligand-binding domain of putative repressor of the endoglucanase operon and its close homologs. This group includes the ligand-binding domain of putative repressor of the endoglucanase operon from Paenibacillus polymyxa and its close homologs from other bacteria. This group belongs to the LacI-GalR family repressors and are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.	3.01124e-106
NZ_CP042432.1\|WP_132130064.1\|1588563_1590033_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	1.19055e-172
NZ_CP042432.1\|WP_132130078.1\|1562655_1563885_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.07079e-94
NZ_CP042432.1\|WP_132130068.1\|1582902_1583472_+\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	3.88733e-101
NZ_CP042432.1\|WP_132130071.1\|1578396_1580757_+\|DUF255-domain-containing-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	4.89537e-39
NZ_CP042432.1\|WP_132130079.1\|1562015_1562654_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	4.88874e-52
NZ_CP042432.1\|WP_132130067.1\|1583538_1585074_+\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|223679	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP042432.1\|WP_132130070.1\|1580986_1581529_+\|CHRD-domain-containing-protein	gnl\|CDD\|377837	pfam07452, CHRD, CHRD domain. CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in chordin, an inhibitor of bone morphogenetic proteins. This family includes bacterial homologs. It is anticipated to have an immunoglobulin-like beta-barrel structure based on limited similarity to superoxide dismutases but, as yet, no clear functional prediction can be made. Its most conserved feature is a GE[I/L]RCG[V/I/L] motif towards its C-terminal end Most bacterial proteins in this family have only one CHRD domain, whereas it is found repeated in many eukaryotic proteins such as human chordin and Drosophila SOG..	3.37921e-29
NZ_CP042432.1\|WP_132130072.1\|1576611_1578312_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	1.54083e-48
NZ_CP042432.1\|WP_132130073.1\|1573197_1576596_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	1.57113e-152
NZ_CP042432.1\|WP_132130065.1\|1587484_1588513_-\|6-bladed-beta-propeller	gnl\|CDD\|271328	cd14958, NHL_PAL_like, Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5). PAL catalyzes the N-dealkylation of peptidyl-alpha-hydroxyglycine, which results in an alpha-amidated peptide and glyoxylate. Amidation of the C-terminus is required for the activity of many peptide hormones and neuropeptides. The catalytic residues of PAL are located on several NHL-repeats. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.24423e-36
NZ_CP042432.1\|WP_132130076.1\|1566751_1570135_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	4.72773e-143
NZ_CP042432.1\|WP_132130062.1\|1596017_1597499_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	2.98922e-167

>NZ_CP042432.1|WP_132130071.1|1578396_1580757_+|DUF255-domain-containing-protein
MMKKVILIWLFLAAAVGAGAQIFDPVTWAFSAKPSGENEVTLILKAEIDPGWHVYSQYIEEGGPIPTSFTFTPSADYELIGEVAEKSEVEKVMDPNFGMEVLYFSNEAVFEQRIRLKKASSTVKGVLEFMVCDDQRCLPPAEVEFSIDASHPDFKASGATSGPGGAEKAASGKAVSDKAASEKASPGTNDGSERNTAESPGDQENSQSNAASPGSAGQAPGNGQAGGVAGQSGQAGAQNPDAGESSAGQTSGATGESVTGQEPGGADASPSLPPALEQAAENADAKNENKSLFGIFIAGFLGGLLALLMPCIFPMIPLTVSYFTKRGAVGGRSKAIGSAALYGLSIIVIYVALGLLITVLFGSGKLNELASNGILNILFFIILVIFAISFFGAFELNLPSSWTTFADKKADSRGLTGIFFMAVALGLASFSCTGPIIGSLLVEAASKGTLLGPATGMFGFALALAIPFTLFAIFPQWLQSLPKSGGWLNTVKVSLGFLELAFALKFLSTVDMAYHWNLLDRDIFIVLWIVIFGMWGFYLLGKLRFAHDSETTHLSVPRLFFAIFALGFAIYLIPGLWGAPLKPISSFLPHQGSQDFDMYTASLGGSTSGGSGNASAEASGAEKKYTDLFHAPLGLNAFFDYEEGLAYAEKVNKPIFIDFTGWSCTNCRRMEASVWPDAQVLERLRNDFVLVQLYVDDKTALPEDEQYVSEFSGKTINTIGKKWSDFQASRFNTNSQPYYVIVNHQGQVLVPPRAFDLDIPEYVAFLDKGIEAFRTGEGVLTKAGVR
>NZ_CP042432.1|WP_132130072.1|1576611_1578312_+|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKTHINRRYSNLAIATLAALLALPALSSCTKDFGDINTDPSLVTEPDVKFLFTYSANAVPPTGGEWIWESLEQTMRFTQQVTASPYEITGNVNSRYGRYYSEVLPNLVEIRRQIDLKEDAERYQKMKALTYILDVYMGIRATDMNGSMPYSEALLARYEDKYNPVFDPQEQLFNTWLTHLNQAIAVLSDNSLADQESYGNADIFYAGDWLQWVKLANTLKLRIAVRLELGNNELAQQLFREVMEDPTGPIDGEEAEMRYLNPEQNPIGNDVDYRSRRFATREMVDFMKRTGDPRIQIYFDANDLTGSYADTLAKYGETLPSFIDPADPLIQYQGGPPDWTVSPDVATYLSNPFTVSQYSRYFLISPINRSLLSPKLNGATGNSLQVLVSYAETCFYIAEFIEKGYGGGVDTRGTAAEWYNKGLASSLRTMNQVAAEAQSETAFSGSGDAEIAAWLADPDVMLNGTNDLERIYIQQYLAFFLLPNEAYVFCRRTGYPRNNSAYYQMEEFNEPIPRRFWINDPGEVNRDNWLNAYEAQGFTPRAVDAQTLSQERVWYDKTAPAFGEGS
>NZ_CP042432.1|WP_132130073.1|1573197_1576596_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MSYRYIFQKGWLLVLMLGVTLSLSAQQLVTGTVSDGAEPLPGVSILVRGTNQGTQTDANGAYSINVGPEAVLEFSLLGFRPREETVGDRKVIDVVLTQDASRLDEVVVTALGMEKDEKSLGYSVTEISGAELAVTNETNPVNALQGRVAGVQIDMGAGGLFGNSKILIRGNSTLGKNNQPIFVIDGVIMDNDIFEGNGRDFGNDLKNLNMNDFESVSVLKGSAAAALYGSRAINGVVLITTKKGKRNTGLGINLTQTFNSYQPYSGPDFQNVFGGGTAGPFFSDRRDPNYTADQAYITKVFPVDPATGKPYIDQGINRELENWGPRMEGQEVLNYDGTPTRFLPQPDNFLDAFQNGFGSNTNLSLDGGTEKSTFRLSYNRNESEGVVRNNELVKNAFGLRVTHELHSRINLDVSANYSSFRGLNPPRLGGLDAFASYNYGKLFTWMLPRNYDTEYWMQPEHYISALGGAPNPNSNEETNKAPESRFWFNLFENNYFQKEQMLRSRVAITAELTGWSNLILEGSLNNVYTETEDKELGQGEDFAGGLYRLGHRAKENYFLKAMVTAQRDITPDLDISGYIGGEIQRTTSSYNKGETSGGLSYPGNYFLANSVNEPVSEGGIDYRRAFNSLYASADLSFKDQLYLQATWRGDWSSALTYTNGTGNNFFHYPSVSLSWIFTETFDLPSWISYGKFRTNIAALGSDTDPFVINPGFAFEGFTNIGGQDLPISTFGDRRVRVSNLKPERKIAKEIGAEMRFFNGRLGFDLSLYQDNTRNQILDISTPVESGVDAILINAGNIQNKGIELAIDAIPVEMPSFSWSTALNYSRNRNLIVELYEGRSEFNLGANIAEISSWAVVGKSYGTLRSSIQAARFQATDDSGNPVDHPHNGKVQLAWRSDARAAFPARSNIIQDVGDINAKFRGGWDNTIRYKNFSLNVLVDAKIGGDFVLATYRYGTHTGVLPNTLFGRDEEYGGIPWTSEWDDIAYDDGIIPDGVFAEGQIITKHDGTQVDVGGMTYEEAYKQKIVEPTHAPHFYYRYGSSSTGVSDYWIFENSWVSLRQVALDYQFPQEFCRKLKLNTLSLGVVGRDLLYLYNSLPYNYNPASNNSNNTAFYGEEGFLPMIRSLAFTLRVGL
>NZ_CP042432.1|WP_132130074.1|1571972_1573163_+|ROK-family-transcriptional-regulator
MRLKDKNKELKNRVLKQLYFRQSMSHADLSALINKSLPIVSRAVSELIEEGLVVEQGYAPSSGGRRPLIYSLRPDGMFVLSVAMDQLSTQMVMVDMLNRPVTDTETFDLELPRNSPALSTLTDRIKAFIKKSGIQKEKIIGVGIGMPGFVDPQKGINYTFLDAGESSIPGYISNALDLPVYIDNDSSLVALAELKFGAAKSLENAMVVNMGWGIGLGMIVNGELFRGHSGFAGEFSHIPISENGALCGCGKRGCLETECSLLVVARKAREEITGGRVSNLQFSVNDPPEKIIEVVTEGARKGDQLAVELFSDAGYVIGKGLAILIHIMNPEVIILSGKGAAVGRILLASAQQALHKYAIPRLAGATSLEVSELGPNAGLIGAAALVIDNFDKIRLS
>NZ_CP042432.1|WP_132130075.1|1570149_1571958_+|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKKINIFIIGLSLVAVWTSCQKELQEINTNPNQLNDSRPEFLFTNATLNFNLEGRSQLSTRYSSVMRYMQYIVSDGADKEGLESPYWDASETAGPNPGFNYYADYYNGDGRDLHRIIEKIDMMDEAQQASYANIKAICRILDTYQAWRVADVYGAMPYSQAFNPVEFPLPAYDYDFGLYQVFDTQLKESAAVLMANSPNQVNLARQDFFYGGDTGKWLRFANTLRIKIAQRYEERDPDQLASVLNDIEANFDGQIISANEESFGYSHPRDWNNNVDDINVILFEYNAAYPFVEFLKSTADPRIAFMVRKNDFGTEFSGYTNVQQNGDAAAKAALLEPENQVRYWGKHVFSASREPEYGATGADRFKTFTVEGGTQDLGFLSAIQSRLFVKNGGFGGFDSRSSRDLMHSDETYVDGSTIKMRMPYLSYAETCFMMAEIAAKGGNGLGKGASQWYNDGVTASFEHYKTIGVATNIPGAASVELGDFLSRYPYNGLTSIYSQAWVHFLIQPEEAWAMWKRTGYPQSVDFRSGQPSPIGDGSGIAYLENLWTGSQNLVVPRRMPLPEPQDQNRENFNKAIQDMTEKDAAYGVSTNDTKGRIWWDAN
>NZ_CP042432.1|WP_132130076.1|1566751_1570135_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MMKMYILKRSWIIVLVLISAIDAYAQKVVTGRVTDGAAPLPGVTILEKGTSNGTQTGEDGSFSISVSSEAAVLEFSFLGFQNQEIAVGDQSSLDVVLTEDAEQLSEVVVTALGVEKENSRLGYSVTTVDGSDLARTNTVNPITALQGKVAGVNINVMGSSGVQTSPSILIRGVTSLSKNTQPIFVVDGIVIENNRFGADDGVDYGSQLKNLNPDNYESITVLKGAAATSLYGSRGINGAIVITSKKGKGGQGLGIELNSTYTITRAYENSIPLQNVYGMGSPFLREGNFRPDGTTNLTSYSFGPRMDGRMYPALYNSDLQVPFSPRPDNWRAFYQDGGFLNNNIALSGGSEKYTYRISYSNTNNKGILVNNKLQRNAFDFRASGQLNNVFSIDAGLNYANTSTTNPYGQNRYSWPGGTNVGFMTYYALPRNADLATWRKDYRNPDGSVRNYGYSLWDGQLMSSFSRFDNRNEERNENSVLANLQLKAQVNPWLDFSARGNFNFYKIFTEVKEKGNGAGGTGGYYGLSGSYNSSYNMLISGHATASAMDGDLGMDFRVLNEIYGNSISETYSRNTRGGLIIPNEFILGNSVLNTIDAGSINYTYATPSNRVIGIAGIANFSYKDFLNLELTARNDWVSSLTYPEGFAGANNYSVFYPSGNVSYSFVDHFREGMPSWLSSGRLRASLAFVGTGTEPYATSFSGFIPSVIFDQDGNSISIASQQNANILPNPNLKPEIQRAIELGTNFGLFDDKLTVDFAYYKTNTFNQILTIPGIQETGYSNMRINAGDIQNQGIELLVSANPVRTKDWNLDMAFNFTRNRGKIKEFYPGITSYALMGNYDGASVYAYEGGAFGMLSAEKGAYVDTDPASGLPLIRVADRIVETNPDSKMDVAHYEYVYDTYDTEKPREDIGSIEPDFLAGFNTSLRYKNFSLYAQVDSRVGGLLYSESFNYGMGRGNPEASLRFRDREHGGMERTDSYTGETVYDGAIPDAVFDQGQTSPITGADISGMTFREAYDQGLVEPWKAGIYYPYTFGWGTNLNTNGSVTENTWVMLREISLTYHIPTSLLSKIKVGGASLRFTARNILYIYNGLNAKQNPESLQSNNPFNPVITGGVPFSRNYGLSLNVTF
>NZ_CP042432.1|WP_132130077.1|1565531_1566566_+|LacI-family-transcriptional-regulator
MPEQKISIRDMADRLGVSPTTVSFVLNGKQKEKRISEKVAKRIIAMAKKLKYEPNHMARGLRTGKTKTIGLIVEDISNHFFAHIAKVVEHRALLHGYRVLYCSTEDNIKKARELLQMLKYRQVDGFIITPTASLENEISMLLEEKRPVVLIDRYLPGLPVSYVIADNFTGSYQAVTHLIKQGYRKIGFITTTSGQMQMKSRFDGYQQSLHDRGIPYNEDLVLRIPFGGARSNAPRTIMEMLEKQAPEALFFATNYLGICGIEGIKKLGMRMPGNVAIASFDEHDLFRLHDPGITCIAQPIERIARKVVDILVSEMESESDRTTTQIMLPPKLVIRGSSAGRNNS
>NZ_CP042432.1|WP_132130141.1|1563998_1565417_-|alpha-L-fucosidase
MTVLASCKTTRQETAVNNQEISTEGLVLPSPQQVEWQQMEYYMFIHFGPNTFTDMEWGHGDEDPEVFNPTALDAEQWARVAKQAGMKGIIITAKHHDGFCLWPSKYSTHTVKESGWKDGKGDVLRELSAACKKYGLKMGVYLSPWDRNHPAYGTPEYNQVFVNMLTEVLTGYGDIFEVWFDGANGEGPNGKRQVYDWDLFNGTVHKYQPDALIFSDVGPGCRWIGNENGIAGETNWSTINTEGFEPGTKAPAREVLNQGQAEGRQWVPGEADVSIRPGWFFSPSTNDKVKSLEHLLDIYYSSVGRNANLLLNVPVNREGLIHPNDSARLMELRRNLDDTFDENLAENAKITSESGKTASLKKLTDGDFHTFWTPGKAATSASFTLDLGGVKEFNRLELQEYIAAGQRVKSFSIEIWDEQQQEFRELDRQTTIGYKRLLRFPNVKTSRVRINITDSKPGPVLSGLGLYLGTGF
>NZ_CP042432.1|WP_132130078.1|1562655_1563885_-|insulinase-family-protein
MSYSLFTLKNGIRVLHNPAGNTDIVHACVVINSGSRDEPDDKTGLAHFIEHLLFKGTLKRNTFQVLNRLEAVGGDLNAYTTKEQTCIHASFLGAHLDRALDLLSDVLFRSTFPEGELAKEKGVILDELDSYRDTPEEQINDDFEEIIFRHHPLGNNILGTPESIPEFTREDIFRFRQDNYSTHEMVIGISSGAPHAKIRQLCEKHFGLIPENAAKRKRLPVNGYHPQEKTEKKPIFQAHFMLGGRSYPLDHEKKTAMLLMNNLLGGPSMSARLNLTVREKHGICYTIESGYSPMSDTGLFSIYFGTDKEKADKCLKLIHRELKKLREQPLGTTQLYQARERFKGQIALAEEARLSVIIYMSKSVLDYGRIDSLQEIFEKIDRVSAADIMDVANEALEPRNLSLLGFIPQ
>NZ_CP042432.1|WP_132130079.1|1562015_1562654_-|O-methyltransferase
MEHLTDKKLTEYAEKHSSPESELLAELNRETNLKVPMPRMLSGHLQGRALALFSRLLQPSRILEIGTYTGYSAICLCEGLKPDGKLITIDINEELEDMVRGYFGRSGYGTRIDYLLGNALEIIPGLQESFDLVFIDADKKSYGAYYDLVIEKVRPGGLIIADNVLRHGTVVAGNTDKETRNMQQFNEKVQADSRVENLLLPIRDGLMIARKR
>NZ_CP042432.1|WP_132130070.1|1580986_1581529_+|CHRD-domain-containing-protein
MNTNNPFKARPAAWITSLLCACVLVLPACEDEEDAPEEKVTVEASATLNAEQETDDVTSPGTGTFTGTYNKNTGEFTFTLNWTNLTGPPTMMHFHGPAGPGTNASVKIGITGFPADAAGSVSGTVTVEEGDRADLLAGKWYVNIHTEAYPPGEIRGQVTFPAGSGGDNGGGGGGGDGDGY
>NZ_CP042432.1|WP_132130069.1|1581921_1582899_+|6-phosphofructokinase
MSSIQHIGVFTSGGDAPGMNACIRAVVRTSIFHNLRVSGIMRGYEGMINGEIESLGVKSVANIIQRGGTVLKTARSDEFITPEGRKKAYEQLKKAGIDALVAIGGDGTFTGADIFQSEFDIPVIGIPGTIDNDLYGTDFTIGYDTAINTVIDAVDKVRDTAESHDRLFFVEVMGRDSGLIALRSGIGVGAEAILLPEVDTDLEQMYERLEKGRKDKSSKIIIVAEGDNEGGAFPIAQKVKERFPHYDTKVAVLGHIQRGGKPTCADRVLASRLGFAAVEALMDGKRGVMAGVMNHEVVFTPFERAIKHISELDPAWVRMVGILST
>NZ_CP042432.1|WP_132130068.1|1582902_1583472_+|D-sedoheptulose-7-phosphate-isomerase
MKDRIKQHFLEAASVLDQFLSDEHNIEKIASAGNIMVQAIRSGKKIISCGNGGSMCDAMHFAEELSGRYRDDRPALPALSISDPSHLSCVGNDYGYPYVFSRYIEAIGQKGDVLLAISTSGNSENILLAIEAARKKNMEVIGLTGKTGGKMAGWCDVEIRAPQSPYADRAQEIHIKIIHSFIDFIEQHL
>NZ_CP042432.1|WP_132130067.1|1583538_1585074_+|YifB-family-Mg-chelatase-like-AAA-ATPase
MLIKTYGGAVQGIEAITITAEVNVSGGNNYSIVGLPDSAVRESYKRIDTALRNKGLHMPRRGILVNLAPADIRKEGSAYDLCIATGILAASGQMKAEEVHKYMIMGELSLDGGLQPVKGLLPIAIQARKEGFKGFILPKQNVREAAIVNGLEIYGAANLVEVFRFFNGEESLEPSGMNTREVFFSGINRYEQDFSDVKGQENVKRSLEIAAAGGHNIILIGPPGAGKTMLAKRLPTILPPLTLNEALETTKIHSVAGKLSASDALLTARPFRSPHHTISDAALVGGGGAPQPGEISLAHNGVLFLDELPEFKRAVLEVLRQPLEERKVTISRSKFSVNYPASFMLVASMNPCPCGYYNHPSKECECPPGSVKKYLNRISGPLLDRIDIHVEVTPVAFSELAGTRTSEKSEQVRERVVTAREVQRARFREREGIYANAQVPSRDVREICRIGSTGQSLLKTAMERLNLSARAYDRILKVSRTIADLAGSPEIHTEHLAEAIHFRSLDREAWK
>NZ_CP042432.1|WP_132130066.1|1585168_1587454_-|cytochrome-C
MKLLKNITLNLIFGLNIFILFFVLFEGRIAIPAPLQVAGRMHPLLLHFPIVLLILALVFEFFNRHLREELPAGPGDGYSARHREGLPDRQRKSPATALREEVPYDGARAAEIRADSAGKKAVGLLLYGGAISAALTVVFGLILSKEEGYGGATLNWHKWTGIAISFFAALLLWYQQGKAARPRVLRIGMAVTCLVLLLAGHLGASLTHGENFVLQPILPEKSKKVDLATAVVFSDLVLPIMEEKCVSCHNEDKAKGQLVLTDTAAFLAGGKNGALFEPGDPAASLLMERLLLEPGHKHHMPPKNKPQLSPEELSLIQAWIRSGADFNIPLAALPPNDTIHQLAKVIYDTAPVAEKFDFPAPDPGLVKDLNTAYRVIAPLAKGSPALDVSFFNSRVFSGESLEALKPLSRQVVRLNLSGMPLKAGEFQLLKEFVNLRQLNLNYTPLTDKELAVITQLPRLRSLMLTGTAVTPAGLDSLVSMPRLRHLYVWNTAVTKEKALEWVSRRPGLAVETGFYDDGSMVLPLNKPEMNPARAFFREAFTLRLNHPISGAELRYTLDGSEPDSLNAPVFKEPLSISENTLVKVKAYKKGWTGSETVQTYFHKASFRPDSARLEFPPDPQYKGRGAFTLFDLDNGSMDIRDGKWLGYRGGELSASLEFKEPHTLNGVALSTFMNTGGYIFPPASVEVWGGADSSQLALLYKKSFEMPGEHQPAGKHIYECPLEKQAVSYLKVVVKPLAELPSWHAGKGQPAWVFVDEILLN
>NZ_CP042432.1|WP_132130065.1|1587484_1588513_-|6-bladed-beta-propeller
MERRSFIRNTAVLSSGILITGNLFGMKKPAKVYGHNGMTYAQEEGWGILDSSRFPVKDCHEMVQDKKGRIVLLTNEVKNNILVYNKSGKLKDSWGHAFPGAHGLTLSREGGEEFFFITDTQRHQVFKTTADGKVIMTIDYPAETGLYEKKEQFVPTETTVAPNGDIYIADGYGLQHIMQYDSKGKLKAHFGGKGETDANLDNAHGICVDYRKGDPTLLITDRTRCCFKRFSMDGKLLEIINLPGACVCRPVIKGDHLYAAVLRSPDLSHENSGFVTILDKDNKVVSNIGGSEPVYKDGILQPMRQETPLFKHPHDVCIDDDENIYVAQWASGKVYPYKFKRV
>NZ_CP042432.1|WP_132130064.1|1588563_1590033_-|DUF1501-domain-containing-protein
MKKDAIHDAIIESRLKVNRRQFLSRLSVGIGSAALGSLLIPDLFSRSVAAGEEFTPGIPHFAPKAKRVIYLFQSGAPSQLESFDYKPMLREMMGKDLPESVRGGQRLTGMTANQASFPLVGSYYDFQQYGKARAWVSDLFPFTAKVVDDICIVRSLHTDAINHDPAITFFQTGAQQGNRPSMGAWLSYGLGSENQNLPAFCVLVSKGKGNGQGVYSKLWTNGFLDSVHQGVQFMPGPDPVLYLGHPAGTDGKSRRALLDKLGELNQLQYDEFGDPEITAKIQQYEMAYRMQTSVPDVTDLSGEPDHVIKLYGPDCLVPGTYAANALLARRLVEKGVRFVQLYHQGWDQHGNLPNEMAGQAKDVDQASAALVTDLKQRGLLEDTLVIWGGEFGRTNYCQGHLEFNNYGRDHHPRAFSMWMAGGGVKPGIVYGETDEFGYNIVKDPVHIHDFHATVLNLLGLDHERLTFKHLGRRYRLTDVAGKVIDGLMA
>NZ_CP042432.1|WP_132130140.1|1590051_1592355_-|DUF1553-domain-containing-protein
MIAATATSLLLINCNRSEPEGITGSGKLPDKVDFNFHVKPVLSDRCFACHGPDDNAREADLRLDLEENAYAALKDMPEAHAIVPGKPEESMVYLRITSDDPDLKMPPPSSNLKLSEYEIKLIGKWIKQGAEYEKHWAFLPPEKPALPEVSREDWPRNDIDRFVLSKMDLVGLEPNEPADKEHLLRRVSVDLTGLPPDLEMMDAFLADDSPQAYEKIIDQLLASPAYGEKMALHWLDVGRYADSYGYQDDDRRTQWPWRDWVIHAFNENMPYDQFLLWQLAGDMLPEANKEQILATAFNRNHKYTEEGGVIEEEYRVTYNIDKTNTFSKGILGITMECAQCHDHKYDPFSQQDYYEMYAFFNNTPEKGLEGLVGSEPAKTPILYINDEDVKGILDFVNKPDTGRMMVSVMEELDTLRKTYILNRGLYDSPGKRVFAATPEAILPLDTTRYPRNRLGLAKWTISKENPLTARVFVNQVWNKIFGRGIVESTGDFGAQGKLPSHPELLDYLAVSFMEHDWDIKWLVKELVTSATYRQSAKISEKKLYTDPDNIYLARASRLRLPAELIRDHLLASSGLLVKQLGGPSFKGYQPDGIWEVTSSGRGTLARYVQDHGQDLYRRGIYGFIKLTVPPPNMLIFDASNRDQCEVERQRTNTPLQALVMMNDPAVLEAARVLSGTLLSQQELAPQERITRAFRRILCRTPKEKELELLMEFYKQELERYGKEPEKAKAFLQAGEYPHRRGLDAVQHAALMSLVHGIYNLEEAITRS
>NZ_CP042432.1|WP_132130063.1|1592784_1596006_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKRQLFTLLILTLSMLLPALSWAQVQVSGKVTDAATDEPLPGVAVTVQGTTIGTQTDLEGNYQINVPSSGSMLEFRFLGYTNQTIAADRELINVELATSAQALNEVVVTAMGTQRSRNELPFAAEEVSAEELTRTRGANFMNSLSGKVSGLAIRQNNSLGGSTNVVIRGYKSITGNNQALFVIDGVPVSNANTNTEDQMEGFAGYDYGNAAADINPDNIASVNVLKGAAATALYGSRGANGVIMITTKKGRKNSLEVLVNSGFTVGSIDKTTFAEYQNEYGAGYESGFYDVSFPDGDGEGQAVLFDHDASFGSAFDPNLMVYQWDALDPASPNYHRKTPWVAAPNDPSDFYENSTNSNQSIVIRGGGDRSTFKAGYTRIDQTGVLPNSSLDKNLFNFSAAYDATPKLKISANANYSKIDGLGRYGTGYSGINVNQQFRQWWQVNVDIEKQKEAYFRNRRNVTWNWADLEGTGPIYSDNPYWTRYENYQNDTRNHYFGYAAADWIVTDWLSIMGRAAIDATDDFQEERVAVGSAGGTAAAEYGRYNRTYSEANYDLILNFNKSLSADLSLTGLLGGNMRRIKINSVRATTNGGLVVPGLYSLSNSVSPIEPPDENYERVGVDGIFASATLGYKETVFLDLTARRDQSTTLPEGNNVYYYPSAAASFLFSNVMEDSPWLSYGKLRVNYAEVGNDAPALSLFDVYDKPAGFGSIPIFSLPDVKNNEELKPERTKSIEAGLDMAFLDNRFGFEFSWYKTRSVDMIIPVRVSAATGYTERFINSGEMQNKGIELSAFITPVLSDNFSWRMDLNFTRNRNKVVSLYGEGDNKVENIIIGDFQAGSANAAVGYGYGVIKGSTYVYHENGQPIVRPNGYYEISSTSDNVIGDPNPDWIGGISNTLRYKGVSLNFLVDIRHGGDIFSLDQWYGMGTGLYPETAGLNELGVPKRAPVSENGGILLPGVQEDGSPNDVRAALSNGSANPYGYVESPEIFGIFDASYVKLREVALTWSLPDNWIENLRAFKGIDVSLIGRNLWIIHKNLPYSDPEEEDSAGNINGYQGGAYPTVRTLGMNVRFRF
>NZ_CP042432.1|WP_132130062.1|1596017_1597499_+|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKKLIIFLFPLIFLASCVENLDDYNIDQKRADEAPPATLFTSALLNLTDDMATPNVNINNFRFYIQQWSATTYLQEPRYDLLSRIIPQNWWEGKYRDVLSDLKEAKELLLADEFLEAAVKDNQRAQIEIIEVYTWSVLVNTFGNIPYSEALNINDPLPKYDDAATIYNDLLARLDTALALLDPSAEGFGDGDLLYNYGDITTGVEGWVKFGNSLKLKLGMILADVDPAKAKAIVEEAAPNVFESNEDKARFPYISTPPNHSTIADNMHPDFSTRQDYVAGKPFVDKLNELEDPRRPFYFTTVDGEYKGGYIGFTNAYADYSHVSDKVIAPDFEYLLMDYSEVEFLLAEAVERGFNVGGTAAGHYNDAITASITYWGGSQAQASAYLLQPDVAYLTAEGNYKQKIGVQKWIALYNRGYDAWTSWRRLDYPELEPVGPGTAPPDTDPQDIPAGLNIPVRLIYPVSEQGENGANRAEAAAAIGGDEVTTKLFWDVN

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Crispr_ID: NZ_CP042432_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_5

1623564-1623654

Orphan

Consensus_repeat	Method
CTGCGGCCCCTATGCCAGGACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_5

>merge|NZ_CP042432|5|1623564-1623654|CRISPRCasFinder
CTGCGGCCCCTATGCCAGGACGCGGGGCGACAGGCAAAAAATAGCCCCGGCCTGCGACAACCTTATACCTGCGGCCTCTATGCCAGGACGC

>NZ_CP042432|5|5|1623564-1623654|CRISPRCasFinder
CTGCGGCCCCTATGCCAGGACGC	GGGGCGACAGGCAAAAAATAGCCCCGGCCTGCGACAACCTTATAC
CTGCGGCCTCTATGCCAGGACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132130044.1\|1615933_1617727_+\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|273597
NZ_CP042432.1\|WP_147698259.1\|1625093_1626089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274225
NZ_CP042432.1\|WP_132130047.1\|1614158_1614638_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|376811
NZ_CP042432.1\|WP_132130042.1\|1618884_1620036_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340860
NZ_CP042432.1\|WP_132130032.1\|1633554_1634715_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
NZ_CP042432.1\|WP_132130034.1\|1631105_1631381_-\|DUF4834-domain-containing-protein	unknown	unknown	gnl\|CDD\|374375
NZ_CP042432.1\|WP_132130045.1\|1615693_1615873_-\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_147698260.1\|1626287_1626719_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340851
NZ_CP042432.1\|WP_132130035.1\|1628496_1630965_-\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|370572
NZ_CP042432.1\|WP_147698261.1\|1626868_1627552_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340851
NZ_CP042432.1\|WP_132130041.1\|1620066_1620831_+\|macrocin-O-methyltransferase	unknown	unknown	gnl\|CDD\|377550
NZ_CP042432.1\|WP_132130033.1\|1631383_1633411_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP042432.1\|WP_147698256.1\|1622302_1622752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130036.1\|1627562_1628396_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP042432.1\|WP_132130043.1\|1618204_1618885_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|372616
NZ_CP042432.1\|WP_132130031.1\|1635123_1635906_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|277343
NZ_CP042432.1\|WP_132130040.1\|1620830_1622318_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP042432.1\|WP_147698257.1\|1622817_1623540_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340831
NZ_CP042432.1\|WP_147698258.1\|1623789_1625121_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP042432.1\|WP_132130046.1\|1614773_1615550_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|349977

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130040.1\|1620830_1622318_+\|hypothetical-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.16661e-19
NZ_CP042432.1\|WP_147698259.1\|1625093_1626089_-\|hypothetical-protein	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	5.74151e-29
NZ_CP042432.1\|WP_132130047.1\|1614158_1614638_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|376811	pfam02542, YgbB, YgbB family. The ygbB protein is a putative enzyme of deoxy-xylulose pathway (terpenoid biosynthesis).	1.53846e-95
NZ_CP042432.1\|WP_132130042.1\|1618884_1620036_+\|glycosyltransferase	gnl\|CDD\|340860	cd05844, GT4-like, glycosyltransferase family 4 proteins. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to glycosyltransferase family 4 (GT4). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	4.17526e-57
NZ_CP042432.1\|WP_132130032.1\|1633554_1634715_-\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	3.29011e-08
NZ_CP042432.1\|WP_132130034.1\|1631105_1631381_-\|DUF4834-domain-containing-protein	gnl\|CDD\|374375	pfam16118, DUF4834, Domain of unknown function (DUF4834). This family consists of uncharacterized proteins around 90 residues in length and is mainly found in various Parabacteroides and Bacteroides species. Protein in this family are characterized by a strongly conserved KDEGEYVD motif on the C-terminal and a very divergent N-terminal. The function of this family is unknown.	6.03329e-09
NZ_CP042432.1\|WP_132130046.1\|1614773_1615550_-\|RNA-methyltransferase	gnl\|CDD\|349977	cd18104, SpoU-like_RNA-MTase, SAM-dependent RNA methylase related to SpoU-TrmH. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	1.01747e-78
NZ_CP042432.1\|WP_147698260.1\|1626287_1626719_+\|glycosyltransferase	gnl\|CDD\|340851	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.	3.16871e-19
NZ_CP042432.1\|WP_132130035.1\|1628496_1630965_-\|YfhO-family-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	9.48951e-09
NZ_CP042432.1\|WP_147698261.1\|1626868_1627552_+\|glycosyltransferase	gnl\|CDD\|340851	cd03825, GT4_WcaC-like, putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.	4.31626e-56
NZ_CP042432.1\|WP_132130041.1\|1620066_1620831_+\|macrocin-O-methyltransferase	gnl\|CDD\|377550	pfam05711, TylF, Macrocin-O-methyltransferase (TylF). This family consists of bacterial macrocin O-methyltransferase (TylF) proteins. TylF is responsible for the methylation of macrocin to produce tylosin. Tylosin is a macrolide antibiotic used in veterinary medicine to treat infections caused by Gram-positive bacteria and as an animal growth promoter in the swine industry. It is produced by several Streptomyces species. As with other macrolides, the antibiotic activity of tylosin is due to the inhibition of protein biosynthesis by a mechanism that involves the binding of tylosin to the ribosome, preventing the formation of the mRNA-aminoacyl-tRNA-ribosome complex. The structure of one representative sequence from this family, NovP, shows it to be an S-adenosyl-l-methionine-dependent O-methyltransferase that catalyzes the penultimate step in the biosynthesis of the aminocoumarin antibiotic novobiocin. Specifically, it methylates at 4-OH of the noviose moiety, and the resultant methoxy group is important for the potency of the mature antibiotic. It is likely that the key structural features of NovP are common to the rest of the family and include: a helical 'lid' region that gates access to the co-substrate binding pocket and an active centre that contains a 3-Asp putative metal binding site. A further conserved Asp probably acts as the general base that initiates the reaction by de-protonating the 4-OH group of the noviose unit.	2.52105e-46
NZ_CP042432.1\|WP_132130033.1\|1631383_1633411_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP042432.1\|WP_132130036.1\|1627562_1628396_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	2.79427e-72
NZ_CP042432.1\|WP_132130043.1\|1618204_1618885_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|372616	pfam13489, Methyltransf_23, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.7986e-15
NZ_CP042432.1\|WP_132130031.1\|1635123_1635906_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|277343	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.28021e-51
NZ_CP042432.1\|WP_132130044.1\|1615933_1617727_+\|translational-GTPase-TypA	gnl\|CDD\|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_CP042432.1\|WP_147698257.1\|1622817_1623540_+\|glycosyltransferase	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.05722e-31
NZ_CP042432.1\|WP_147698258.1\|1623789_1625121_-\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	2.12952e-10

>NZ_CP042432.1|WP_147698257.1|1622817_1623540_+|glycosyltransferase
MADALIFYVDTAFELMSSYGIPRDRVFITANSPDTDRLLATFERVRQQPLLLSPNPQRLIHVGRLVKWKRVDLILEAIKDLEGLYPQIELVVVGFGPEEAALKQQAESLGIAGRVTFTGGIYDEVVLGQYLHASAVYVLAGMGGLSINDAMCFAKPVICSEADGTEKRLVRENINGKYFENGDAADLARQISFFIEDPARVRSFGENSLKIIREEVNIHTVLQEFRRAFQYAVDQGGKQK
>NZ_CP042432.1|WP_147698256.1|1622302_1622752_+|hypothetical-protein
MEKKLRILFLLGGLPHYFKLLLNKMNSLEDMEVMLVMPGKRGATLGSGVHESREGADFKLFELEERQAWYGKAAFSGLRPLLKREKPDVLVVGWPYMLQFFFDPLLPRFLRKNNIRLVYRDIPFNMPPTERRANTSGNSGSGTKPAARA
>NZ_CP042432.1|WP_132130040.1|1620830_1622318_+|hypothetical-protein
MGIVKRQGFYNSVMIYAGLAMGYVNTILLIPRALDIEEAGLYGVFLSISLTFAQLPTSSITSLIGRFFPYFRSSDKKHKGFVSLAGTAALAVFALFAILFIALRKPVLEFYEKGSPFLGEYYYLVLPMAFFILWFSIFEVLARATYKTVFATFLREFFLKFASSAGLLLVLFGYMGFSSFLLYYILAYGLICVFLLFQLIASGEFRFSWKMNFSRQQGREFLRYGFYTMLAGTPWVLIQKIDLNILSHYALPAVLGGYYLYSNMSAAIGIPRNAMNKVTYQIVSDAWERNDLSKIDEIYRKTSVVQLLMGSLLFIGIIVNRDNLFSLMSNEDYFPYFPLFYFLGLGQLVDITGGLNAHIISISPRYRTGTLLVFLACIFCVGLNFLLVPVYGGMGATFVYFLTMLIYNFSTWWFLRKQYNLQPFSGKHLYILAFAGIAFLAGRYLPYLGHILIDLPVRSLLTTIVFAVPVLAFRVSEDVNEQFWQLLKKAGWKRS
>NZ_CP042432.1|WP_132130041.1|1620066_1620831_+|macrocin-O-methyltransferase
MKKIIQRFLNRYGYHIIKFDKNNPPWEYPADFGGELRGIIEKVKPYTMTLPERLFANYEAVNYITRNGIEGAITECGVWRGGSTMTMLHTLLNRQDTRREIFMYDTFDGMSEPGEEDKAYSGDPAALLLKNSDKHDPRSVWCYASLEDVQRNVLSTGYPQERIHFVKGKVEDTIPATIPEKIAILRLDTDWYESTLHELEHLYPRLQPGGVLLIDDYGHWEGARKAVDEYIREKGLRLLLCRTDYSGRIAIKPN
>NZ_CP042432.1|WP_132130042.1|1618884_1620036_+|glycosyltransferase
MQTAGQQLTLCIIKPNKVNYSEPFVEAHIQRLPGNKKVVYGGFFPLFRHDGSFLIRNKLKLALYLIQKRILGQKSIPVRDKAFASYLKEEKIDIVLAEYGPAGALVTEACREAGVPLVIHYHGFDAHDREVLAEYGELYRESYDYAAAVVGVSEDMCKALEDLGCPPEKVVYNPYGVDLGLFYPVNVSASPINFLSVARFAEKKAPHLTIRAFAKVRKKYPEARLIMAGIGPLWKQSKSLAAELGLEGAIDFAGVLSHEEVYELMKTSRAFVQHSVTAAGGDSEGTPNSILEAAAAGLPAVSTRHAGIKEAVLHEKTGFLVEEQDVEGMAAYLLKLAGDASLAAALGANARLHMEENYSFDHRIGRLWNIICRSSEAGENAWP
>NZ_CP042432.1|WP_132130043.1|1618204_1618885_+|class-I-SAM-dependent-methyltransferase
MSNYRLNPSLFSTRYLHLRELKKYTLRLLDKYDPRKGESLLLDFGCGDMPYREVIGPRVGRYVGVDLEMNPKAEHHIDFDSKTSLPDEYADIILSNQVLEHVDSPQGYLQEARRLMKPDAVMVLSTHGYWFYHPTPNDYWRWTSAGLRKTIEAEGFEIMEFRGIMGLISSGLQLFQDGVGNKLPGVLKSAWALVMQTVIRGADKMNSQAQKDRDASLYIMVVRKKN
>NZ_CP042432.1|WP_132130044.1|1615933_1617727_+|translational-GTPase-TypA
MQSIRNIAIIAHVDHGKTTLVDKILHTCNLFRDNEETGDLILDNNDLERERGITIVSKNVAVNYKGVKINIIDTPGHADFGGEVERVLKMADGVLLLVDAFEGPMPQTRFVTQKALSLGLKPILVINKVDKENCRPEEVHEAVFELFFNLEATEEQLDFQTIYGSSKQGWMSTDWRQPTTDLTPLLDLILEEIPPVPVKEGTLQMQITSLDYSSFVGRIAVGRVARGVIRENMPVSLVKKDGKIVKSRIKELYTFDGLGKLRVQEVKGGDICAVVGVEGFEIGDTIADFEKPEALPGIKIDEPTMNMLFTINNSPFFGKEGKYVTSRHLRDRLFKETEKNLALRVEESDSPDSLLVYGRGILHLSVLIETMRREGYELQVGQPQVIVKEIDGVKCEPVESLIVDVPAESAGKVIELVTQRKGEMKVMEPKGDLQHLEFEIPSRGIIGLRNAVLTATAGEAIMAHRFKSYEPLRGEIPQRLSGVLISMDKGSATAYRIDKLQDRGRFFVSPGDEVYEGMIIGENSRDNDMVVNITEGKQLTNFRTTSKDDAAKIAPAVKFSLEEALEYVQNDEYVEVTPHSMRLRKIVLKETDRKRKN
>NZ_CP042432.1|WP_132130045.1|1615693_1615873_-|FeoB-associated-Cys-rich-membrane-protein
MDVQVFIVGVLFAAALFYVGRIVYRMFRPKPGAGGCASGCGKCGADFSKIGETARIHAN
>NZ_CP042432.1|WP_132130046.1|1614773_1615550_-|RNA-methyltransferase
MISSLQNPRVKQLVKLREKSSERQKQGLFIIEGHGEIALACEAGVVFREIFYCAEIADPALLTRFDPHLLQEVTLPVFEKIAYREHSGGIIGLAEYHPLGLRELRLSANPFLIILEAVEKPGNLGAILRTADAAKADAVIICDPKTDLGNPNVIRSSLGCVFSTQVVAASSDETLDFLKEKKIKSYAAALTAVNYYHETDLTAACAIVMGTESTGLTEKWLREADDQIKIPMRGRIDSLNVSTSCAIIVFEAMRQRGF
>NZ_CP042432.1|WP_132130047.1|1614158_1614638_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MNFRIGFGYDVHQLKEGSPLFIGGLQLPAEKGAVGHSDADVLLHAICDALLGAANLRDIGFHFSDTDERWKGISSIILLEKTAGLLKEKGYRTGNIDCTLCLERPKVNPHIPAMQEKIAEALGVSPADISIKATTSEKRGFVGREEGVTAYAVALIFSL
>NZ_CP042432.1|WP_147698258.1|1623789_1625121_-|c-type-cytochrome
MPEPSANLVKRDSIHYQVNHVSGKQAYENKEFLASTDERFRPVSAYNGPDGALYLVDMYRGIIQHVTYLTDYLKNEISERELSDPLNRGRIYKIIPEGSEPERVTFPSEINGLIALLDHENGWVRDKAQQLIVDRRHPESIPLLREKLKSGGNETGLIHTLWTLEGLYALEWNDLKPFLQSNNEVLVAQALTAIPSVVTRANHAAILEALKPLAANVKLAPYLAYLLPAIHAFAPGAAGEFLLELAKQYPNDAYVADAVISNLHKREADFLEQLNRWNTDTTLVIKKHLEEVLQDIREKEQARLKKELLKELSRGRELFKNICQTCHGADGKGIRSMAPPLNRSEWVTGDKNRLAAIVLFGLTGPIEVNGHVYDQKEIAGEMPGIGNNDALSDGDVAQILSFVRNAWNNNAGLVSAEDVARVREKLKDREGAFTVEELQKLSF
>NZ_CP042432.1|WP_147698259.1|1625093_1626089_-|hypothetical-protein
MYKLRLIAVSLFVISVVTSCKPKQTPEEKRLADSLAIREKYDESPVLSAEESLEHFRIEEGFEIKLVASEPDVRTPVAMTFDEKGRIWVVEMPNYMPDTVGTGEDAPTGTIAILEDSNQDGRMDKRSVFMDSLVLPRAICLIEDGVLVAEPPKLWFVENNNGQAGKKTLVDPEYAAGGNVEHQPNGLYRALDNWIYNAKSAKRYRKKGDRWLIERTVFRGQWGISQDNQGRLFYNHNSANLLGDYFPPRFGAANPSQEDVAGYSENIVPNNRVYPIRPNTGINRGYLEGMLSDSLRLVNFTAASGPVIYRGDCSAGNMPGMPLCRNLPPTW
>NZ_CP042432.1|WP_147698260.1|1626287_1626719_+|glycosyltransferase
MRIVHVNAYDGNGGAGRAMMRLHHALKHTGAQSDALCMYQFDPHSDVTPIYRNWWGKLRSIATIFGERYLGKALAPSRGIPFSLQKMGLPVHRHPLVLNADIIHLHWVNHGMLAPRQMKKLLELGKPLVWSLHDCNPFTGGAT
>NZ_CP042432.1|WP_147698261.1|1626868_1627552_+|glycosyltransferase
MGESVRKASLARGNEVAVIGNALETNVFHPGDRHSARQQLGISQDAFVLLAGHMPSSTDRHKGGAELIQAIRRFRELPGVDHAKILLVFFGGKDRDEADSWPYPAHFAGKIGQEEKLAGYYQAADVFLFPSLQESMGYTALESLACGTPVVAFRTSGVTDVVLHEENGYLATLGDTDQFAEGISWIYHHPSRGELASRGVAHATGHFESGLIAEKHLALYKRLLKAD
>NZ_CP042432.1|WP_132130036.1|1627562_1628396_+|glycosyltransferase
MSTDIHLSVITVTFNCRELLPRTLESVQAQAFSSIEHIIVDGASTDGTLELIRENEAYLGAWISEPDKGIYDAMNKGLRMARGKYVLFLNAGDTFYSEGTLLEVFSAPAAGEASIVSGEAISGSGEAISGSGEANTVFGEANSGSADIYYGQTKLTDLEGRITGDRRLKAPEQLNWRSFRYGMLVCHQSFIVRRAIAPEYDLSWRICADIDWCIRCMKAAEKIENTHSYISCFLEGGISRQQEKKAWKERFAIMKKYYGLGETLLSHLYIAFRFLRH
>NZ_CP042432.1|WP_132130035.1|1628496_1630965_-|YfhO-family-protein
MNDRFSKLLPHLYVVLAFLALSFIYFSPLLNGQELAQSDNIQMKGMSSELVKYKELEGEVPLWTNAMFSGMPSFQIWLEYPSNIASYFIRFWNSLFPNPVHTILLYLLGAYLLFCTMRMKPMLAALGAIAIAFVSYNFIILEAGHSTKAVAVAYFAPIIAGILLALRGRLITGAALTATFLALEIRANHLQMTYYLMLVILVFMAVQLVFAVRNKTFPAFLRSSLVLLGAVVLAVGVNFGSLWVNYEYAKETIRGKSELTAEVTGQESTGGLDKEYAYQWSQGIGESITFFIPNAYGAATNYPVGKNSELYETLVRNNIPPVQAEQITAQPAAIGYATYWGDKTFTSGPYYFGIITLFLFILGLSLVKGPLKWGLLLATVLVVLLSFGRHMQWFSDLFFDYFPLYNKFRAVESILMVAGLTIPLLALIALKQLLDTPETGRKELEKNFRYTLYALGGIYLVLLAVPGLFFSFSSPYDAQRFAQIPFADQLQNALLADRKSMFRMDALRSLVFTAIAGGILWAFLKGKLKTQTVIVLLGIALLADLWTVNKRFLNEEDFVAKSQTEQFFPLRPADQQILQDSTYFRVYDLSARGGAFQSAYASYYHYSIGGYHAAKLHRYQELVDHQIAKGNMNVINMLNTKYFIVPDSASQQIIAHRNPDALGNAWFVNGVRFVADANEEIEALTVAIPRTTAVVDERFRDQIDISKIIQLDSADASIRLTSYHPEKLTYSYESPAERIAVFSEIYYDKGWKAYVDGKEHPYFRANYVLRAMQLPAGKHTVEFRFHPTAYYAGEKVSLVSSILLVLLLGGGIYFGNRRRETA
>NZ_CP042432.1|WP_132130034.1|1631105_1631381_-|DUF4834-domain-containing-protein
MKFLQFLVVFFAIFFLVRLLFRALLPGLLRMVVRKMGSQFTQQYEEPARRPEPEEGNIRVEYIPPKKKEKNGGAGVPGEFVQFEEVKAKKE
>NZ_CP042432.1|WP_132130033.1|1631383_1633411_-|excinuclease-ABC-subunit-UvrB
MQFQLNSHFKPTGDQPEAIRQLVEGVENQEPFQVLLGVTGSGKTFTVANVIEKTQRPTLVLSHNKTLAAQLYGEFKQFFPENAVNYFVSYYDYYQPEAYMPSTNTYIEKDLNINEEIEKLRLKTTSALMSGRRDVIVVSSVSCIYGMGNPEDFSNSIFRVGVGTRVSRNAFLHRLVELLYSRTAAEFRRGTFRVKGDTVDIFLAYADYAYRVSFFGDEIEELSAIDPVNGRTLEKYDTVAIFPANLFVTPKERMLKAIWGIQEELENRKQQFVNEQRFMEAKRLEERVNYDLEMMRELGYCSGIENYSRFFDGRPPGMRPFCLLDYFPEDYLMVIDESHVTIPQLRAMYGGDRSRKLSLVDYGFRLPAALDNRPLNFNEFEQLAPQTIYVSATPADYELEKTGGVIVEQVIRPTGLTDPVIEIRPASNQVDDLLEEIDVTVKKGDRVLVTTLTKRMAEELTKYLARLNIRSRYIHSEVKTLERVDILRGLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSQTALIQTIGRAARNEEGRVIMYADQITNSMQRTIDETNRRRERQINYNIEHNITPKTVRKEKEAIIGQTSVVDFKGGVQQPYVESEETNILADPVIQYMSKAQMEKSAEKTRRQMQEAAKEMDFLKAAKLRDELFAMEKLIREKFG
>NZ_CP042432.1|WP_132130032.1|1633554_1634715_-|hypothetical-protein
MTYDITVFILKFYPGDVRPESGEILYEPGNATRKYGSVILPSGEREWKRRNMMVEDADEASNYHGKDDLLWKWVLEDVFDDFLDFFFPDARHYFDLESGFEWLDKELEQLFPPDNKQYAPRQVDKLVKVFNRQGKEECILIHIEIQGYKQDNFPYRMFQYFSRILDKHQKPVTAFAILTEDNKSFHPDRFEMACRGSRLLYIYNTYKILEQDETALERSENPFALIVLIAKTALKGKKLTDARLYELKIDIMKLLLRKNFPKKKIESVLMFLQNYISFKDKSLDEQFEKQKDLLIKGRTEPMGRTEPIGIKKGMILMAMEEGREEGMKVGMEKGIMKGKQQLARNLIVQLGLDDSQVARLTEMTESEVEKIRAALHLHNNHATSKR
>NZ_CP042432.1|WP_132130031.1|1635123_1635906_+|UDP-2,3-diacylglucosamine-diphosphatase
MTERNVEMVVISDVHLGTYGCHAVELLQYLRSIRPKVLVLNGDIIDIWQFSKRYWPDAHMQVIRKIMKFITEDVQVFYLTGNHDEMLRKFADLKLDSFQLKNKLVLNIGQEKVWLFHGDVFDVTMQHSKWLAKLGAFGYDSLILLNSFVNWLLKMAGRPKMSFSRKIKSSVKSAVKFMSDFEATAASIAIENGYDYVICGHIHHPEIRKVKTESGSITYLNSGDWVESLSALEYDEGKWNLYYYKPEHFASEKMAAVIHA

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Crispr_ID: NZ_CP042432_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_6

1805809-1805883

Orphan

Consensus_repeat	Method
CGCCTCGCTGTTATTCTCCGGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_6

>merge|NZ_CP042432|6|1805809-1805883|CRISPRCasFinder
CGCCTCGCTGTTATTCTCCGGCGCATCCAGGTTTCCCCGTGCCGCATCCGGCGCGTCGCTGTTATTCTCCGGCGC

>NZ_CP042432|6|6|1805809-1805883|CRISPRCasFinder
CGCCTCGCTGTTATTCTCCGGCGC	ATCCAGGTTTCCCCGTGCCGCATCCGG
CGCGTCGCTGTTATTCTCCGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129342.1\|1815984_1816845_+\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224042
NZ_CP042432.1\|WP_132129334.1\|1806565_1807492_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_CP042432.1\|WP_132129333.1\|1806080_1806533_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP042432.1\|WP_132129329.1\|1800654_1801743_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP042432.1\|WP_132129324.1\|1795593_1796439_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	unknown	unknown	gnl\|CDD\|226479
NZ_CP042432.1\|WP_132129336.1\|1808584_1812271_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|236539
NZ_CP042432.1\|WP_132129335.1\|1807559_1808513_-\|methylenetetrahydrofolate-reductase-[NAD(P)H]	unknown	unknown	gnl\|CDD\|273212
NZ_CP042432.1\|WP_132129328.1\|1799931_1800537_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NZ_CP042432.1\|WP_132129339.1\|1813299_1814358_+\|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270372
NZ_CP042432.1\|WP_132129330.1\|1801789_1802533_+\|2-phosphosulfolactate-phosphatase	unknown	unknown	gnl\|CDD\|377205
NZ_CP042432.1\|WP_132129326.1\|1797813_1798803_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP042432.1\|WP_132129327.1\|1798783_1799929_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133035
NZ_CP042432.1\|WP_132129331.1\|1803051_1803378_-\|nucleotide-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|212138
NZ_CP042432.1\|WP_132129323.1\|1793898_1795551_+\|altronate-dehydratase	unknown	unknown	gnl\|CDD\|377287
NZ_CP042432.1\|WP_132129340.1\|1814359_1815235_+\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NZ_CP042432.1\|WP_132129338.1\|1812894_1813074_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129341.1\|1815227_1816085_+\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
NZ_CP042432.1\|WP_132129474.1\|1797191_1797746_-\|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl\|CDD\|234587
NZ_CP042432.1\|WP_132129325.1\|1796492_1796672_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129337.1\|1812535_1812811_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129334.1\|1806565_1807492_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.1169e-154
NZ_CP042432.1\|WP_132129333.1\|1806080_1806533_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	7.24368e-88
NZ_CP042432.1\|WP_132129329.1\|1800654_1801743_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP042432.1\|WP_132129324.1\|1795593_1796439_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	gnl\|CDD\|226479	COG3970, COG3970, Fumarylacetoacetate (FAA) hydrolase family protein [General function prediction only].	9.43241e-43
NZ_CP042432.1\|WP_132129336.1\|1808584_1812271_-\|methionine-synthase	gnl\|CDD\|236539	PRK09490, metH, B12-dependent methionine synthase; Provisional.	0
NZ_CP042432.1\|WP_132129335.1\|1807559_1808513_-\|methylenetetrahydrofolate-reductase-[NAD(P)H]	gnl\|CDD\|273212	TIGR00676, 510-methylenetetrahydrofolate_reductase., 5,10-methylenetetrahydrofolate reductase, prokaryotic form. The enzyme activities methylenetetrahydrofolate reductase (EC 1.5.1.20) and 5,10-methylenetetrahydrofolate reductase (FADH) (EC 1.7.99.5) differ in that 1.5.1.20 (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while 1.7.99.5 (assigned in many bacteria) is flexible with respect to the acceptor; both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as 1.5.1.20 and 1.7.99.5, this model describes the subset of proteins found in bacteria, and currently designated 1.7.99.5. This protein is an FAD-containing flavoprotein. [Amino acid biosynthesis, Aspartate family].	1.84255e-99
NZ_CP042432.1\|WP_132129328.1\|1799931_1800537_+\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	5.82942e-105
NZ_CP042432.1\|WP_132129339.1\|1813299_1814358_+\|PstS-family-phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270372	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.10345e-139
NZ_CP042432.1\|WP_132129330.1\|1801789_1802533_+\|2-phosphosulfolactate-phosphatase	gnl\|CDD\|377205	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase. Thought to catalyze 2-phosphosulpholactate = sulpholactate + phosphate. Probable magnesium cofactor. Involved in the second step of coenzyme M biosynthesis. Inhibited by vanadate in Methanococcus jannaschii. Also known as the ComB family.	4.81177e-100
NZ_CP042432.1\|WP_132129326.1\|1797813_1798803_+\|hypothetical-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	3.63411e-06
NZ_CP042432.1\|WP_132129327.1\|1798783_1799929_+\|glycosyltransferase	gnl\|CDD\|133035	cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.76958e-95
NZ_CP042432.1\|WP_132129331.1\|1803051_1803378_-\|nucleotide-pyrophosphohydrolase	gnl\|CDD\|212138	cd11531, NTP-PPase_BsYpjD, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain putative pyrophosphatase YpjD from Bacillus subtilis and its bacterial homologs. This family includes a putative pyrophosphatase Ypjd from Bacillus subtilis (BsYpjD) and its homologs. Although its biological role has not been described in detail, BsYpjD shows significant sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, BsYpjD contains a single MazG-like domain.	1.74887e-40
NZ_CP042432.1\|WP_132129323.1\|1793898_1795551_+\|altronate-dehydratase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	0
NZ_CP042432.1\|WP_132129340.1\|1814359_1815235_+\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	3.4896e-92
NZ_CP042432.1\|WP_132129474.1\|1797191_1797746_-\|crossover-junction-endodeoxyribonuclease-RuvC	gnl\|CDD\|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	4.50099e-72
NZ_CP042432.1\|WP_132129342.1\|1815984_1816845_+\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	0
NZ_CP042432.1\|WP_132129341.1\|1815227_1816085_+\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	8.87472e-91

>NZ_CP042432.1|WP_132129331.1|1803051_1803378_-|nucleotide-pyrophosphohydrolase
MTIKQAQEQVDQWINTTGVRYFSELTNMAILTEEVGEVARIMARKYGEQSAKTSDTGKELPDELADVLWVLLCIANQTGVDLTTALEKNFEKKTARDSQRHRNNEKLK
>NZ_CP042432.1|WP_132129330.1|1801789_1802533_+|2-phosphosulfolactate-phosphatase
MVRKLEVCFTPALLPLYDIRDSIVVIIDIFRASSSICYGIDNGAEGIIPVATVEECLQYGGSDFLLAAEREGKVVEGFDFGNSPFSYTIEKVKGKQIVLTTTNGTQALHQSLQADKIVIGSFLNKTALCDYLQGQQKSVLLLCAGWKGMFNLEDTLFAGAVVNCLREDIQNVDDAGIAAEELYLMAKDDLRDFLRKSSHSIRLEKLNIEEDICFCLQTDICTSVPILENGRLRKMTPTTISRVRRGS
>NZ_CP042432.1|WP_132129329.1|1800654_1801743_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MNFTAFHRLHEQLGAKMVPFAGFSMPVQYEGISAEHEAVRKGVGVFDVSHMGEFILKGEGALDLVQYVTSNDASVLVDGKVQYSCLPQENGGIVDDLLVYRIDEKTYMLVVNAANIGKDWAHLSKYNRFDVEMIDISSRTSLLAVQGPLAAEALQPLAEIDLRAMEHYTFKKGVFAGISNVLVSATGYTGSGGFEIYFEKTHSEEIWKRIFEAGAPYGIKPAGLGARDTLRLEMGFCLYGNDIDDTTSPLEAGLGWITRFTKDFVNSANLQLQKEKGVSRKLVGFEMLERGIPRQGYEITDKEGALIGKVTSGTQAPSLRKGIGMGYVQKAFAKEGTLLNILIRGQAVGARVVKPPFYKAGQ
>NZ_CP042432.1|WP_132129328.1|1799931_1800537_+|ribonuclease-HII
MNKLLAYYKKDVVEAGCDEAGRGCLAGPVVAAAVVLPADFEHPLLNDSKQLPEDTRYLLREYILEHALAWAVGFAGHEEIDSINILNASFLAMHRAVEQLSCQVQHLIIDGNRFKKFREVPHQCIVKGDSLYYSIAAASVLAKTYRDDHMRELHSECPYYRWDSNKGYPTSAHRDAIRQFGLSAYHRRSFRLLPEQLEMEF
>NZ_CP042432.1|WP_132129327.1|1798783_1799929_+|glycosyltransferase
MAETIIEFISILLTVAYLVIVISFIRGWNRLERPAPPKKGFSTRVSVLIAARDEEKAIGRCLEAVIAQHYPPELLEVIVIDDHSTDRTAEMVRSFQQPGLQPELRLITMNEHKPINSYKKKAIAQAIQVAKGELIVTTDADCWMGPQWLAAIVSAYEEHGYKLISSPVAFSEENSLFERLQSLEFMYLIGLGASAIGNAFPSTCNGANLAYTREVFFQVEGFKGIDDLASGDDELLLHKVAALYYNKIGFVKSRQAIVYTHAKANLREFLDQRKRWASKSIKYRNKLVVALGLSVYFFNVFILLNACLTLFNFNFAVPLLGMLGLKILVEIVFLYFLAGFFRRLPLLVWMPLLNLLHVVYMSYIGLAGQRRSYRWKGRQVK
>NZ_CP042432.1|WP_132129326.1|1797813_1798803_+|hypothetical-protein
MRIRKRTIAVLLKLIILALTCWFIYNKLSEPQSLEKIRAFFKQPFSPRTIWLLSFAGGLMLVNWGVEVFKWKYLVRKIEKVSLWKSTESLLAGLTLAIFTPNRVGEYGGRILYLERGNRVKGAFAMWVGAFGQMLVTNVVGAVAFYFFALRFIDLNQALQIALGLGILIFCLLFVLFYFNVRWLYMILLSFRFLKKFRRYFKVLLMYRKKELMVSLLYSLLRYAIFTTQHFLLIHLFLPSIDYVTSMMLISVILMVQSIIPTMAMLDDLGVRGATSAYFFGFVVSPADASFVLASAFGVWIVNIILPAIAGLFFVFKANFFGGNGGNNH
>NZ_CP042432.1|WP_132129474.1|1797191_1797746_-|crossover-junction-endodeoxyribonuclease-RuvC
MEKDEIILGIDPGTSVMGYGLVNRCGQKLSLISLGVVQLGAFDNHPLKLKNIFERTLSLINQYKPDSLALEAPFYGKNVQVMLKLGRAQGVAMAAGLYRGIPIFEYSPKKIKQSITGNGNAGKEQVAGMLKQLLSFSESPEFLDATDGLAVAVCHAFQRNPTGAPQKQYSGWEAFVKANPGRKK
>NZ_CP042432.1|WP_132129325.1|1796492_1796672_+|hypothetical-protein
MKKKSLIVASITSLGYFIIAFFVYYRGEKDFLVEVLIQTLLFFISGGLFYYFLNKKFLS
>NZ_CP042432.1|WP_132129324.1|1795593_1796439_+|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase
MRVFKTGSATVFIEHEGEFYQKDIPAWDTFINRKGLYSLLKEELKDFAKVAGELPEEAEFAAPVGSQEIWAAGVTYMRSMEARMEESKTAGGGSFYDRVYNAERPELFFKATAARTAGPGGTVNIRKDSAWDVPEPELTLFISSAGTIEGYTVGNDMSSRSIEGENPLYLPQAKVYDACAGLGPCIYVTEKPLPPETEISLEIRRGGQPVFTGRTSLSRIKRSFPELKDFLFRECSFPNGCFLMTGTGIIPPDDFTLALHDEIRISIPPIGVLVNYVGKNL
>NZ_CP042432.1|WP_132129323.1|1793898_1795551_+|altronate-dehydratase
MRNVLRVHASDNVLVALSDLEAGAMVGTGEDSVELRGAVPAKHKIALSAIPRGELLYMYGICVGVATEDIPAGSLITTGNVRHATGSYSVNGAGNMAWEQPDVSKWRGRTFMGYHRADGRVGTANYWIVLPLVFCENRNVDAIRDAFNDLFNPGGGLYYKRFLHELSRQHQQGKSMEELLRYELPEGGYEYPESSLFPNIDGIKFLTHAMGCGGTRDDARTLCGLLAGYITHPNVAGATVLSLGCQNAQIALLKNEIAARFPEYDRPLHFLEQQQMGSEKKMLSEALKLTYTGLIKANEQVRQPAPISKLCLGMECGGSDGFSGISANPAVGKVADKLVASGGSVILSEFPELCGVEQELSDRCVSRELAARFLELMQNYNQRAKAVGSGFDANPSPGNIRDGLVTDAIKSAGAARKGGSSPVVDVLDYPELVRKPGLNLLCTPGNDVESTTAEVAAGANIVLFTTGLGTPTGNPIAPVIKISSNTSLFRRMRDIIDIDSGSIIEGKESLDEVSDRMLEYVLEVASGNRKTKAQQLSQDDFIPWKRGVSL
>NZ_CP042432.1|WP_132129333.1|1806080_1806533_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRTIIQRVTQASVEIADQVKGSIGPGLLVLLGIEEGDSEEDAAWLAAKIVNMRIFGDADGLMNLSVQAVNGDILLVSQFTLHAQIKKGNRPSFIRAARPEKAIPLYERFIALLETQLGKKVQTGEFGAYMKVNLLNDGPVTIFIDTKNKE
>NZ_CP042432.1|WP_132129334.1|1806565_1807492_-|ribosome-small-subunit-dependent-GTPase-A
MQGIVTKSTGSWYILRDEAGNFHECRIKGKFRIRGISTTNPLAVGDRVEFDPGTGAIEQLYERRNYIIRRATNLSKQAHIIAANIDQALLIVTLARPRTSMGFIDRFLVTAEAYSIPAVLVFNKIDIYTAEGKELLTEIKDIYTSIGYPCLEVSALENINLDDLRKTLLIKTSLFAGHSGAGKSTLINKLIPDLDLKTASISDFSGKGIHTTTFAEMFALPGESGGTAAGYLIDTPGIREFGIFDIKREEISHYFVEMRERFNQCKFDNCRHINEPGCAIIRAVENGEIALSRYESYLSMYEGFDNRA
>NZ_CP042432.1|WP_132129335.1|1807559_1808513_-|methylenetetrahydrofolate-reductase-[NAD(P)H]
MKVTDHLKNAKKTLFTIEILPPVKGKSIQSIYDAIDPLMEFKPAFIDVTYLREEFIYKKRENGLLEKVAYRKRPSTISICAAIMNKYKVDAVPHLICGGFSKEDTENALIDLNFLGIENVLALRGDGDKVTGEFVPEPKGHAYGCELVEQIVCMNKGKYLDDELLNAHPSDFCIGVAGYPEKHFEAPNLKTDLRYLKQKVDKGADYIVTQMFFDNKKYFEFVKACRDFGINVPIIPGLKPITTLKQLSTLPKVFYIDIPEELSEEVINCKTNADVCQVGTEWMIAQCKELIDYGVPCLHFYTMGRSEPTRQIAEALF
>NZ_CP042432.1|WP_132129336.1|1808584_1812271_-|methionine-synthase
MSIEEILRQRIVVLDGAMGTMIQRYKLSEEDFRGERFHDHPKEVKGNNDLLSLTRPDIIKDIHKAYLDAGADIIETNTFSSNTISMADYSMESLSYELNFESARIAREAAAEFTRLNPDKPRFVAGAVGPTNRTLSLSPDVNDPGYRAITWEQLYQAYSEQISGLIDGGADIILIETVFDTLNCKVALYAANELFAEKGKKLPLMVSGTITDASGRTLSGQTVEAFLNSVSHADLLCIGLNCALGAKEMRPYVEELANKSTAFVHAYPNAGLPNEFGEYDETPNQMAAVLKDFIAHRFVNMVGGCCGTTPDHIREIAALVEGVPPRELPVVEPHLRLSGLEALTVTPESNFVNIGERTNVTGSPKFSKLILSGDYESALAIARQQVEGGAQIIDVNMDEGMLDGVEAMTKFLNLLSAEPDIAKLPIMVDSSKWDIIEAGLRCLQGKAVVNSISLKEGEEKFIEQAKKVRLYGAAVVVMAFDEQGQADNFERRKEICKRSYDILTQEVGFPPQDIIFDPNILTVATGLEEHNNYAVDFIKATRWIKENLPLAKVSGGVSNLSFSFRGNNHVREAIHSAFLYHAIKAGLDMGIVNAGMIEVYDEIPKDLLEMVEDVILNRREDATERLITYAESVKSAGKTLVKDDAWRTGTVEERLAHSLVKGIIDYLDEDVEEARQKYPKPLEVIEGPLMDGMNIVGDLFGSGKMFLPQVVKSARVMKKAVAYLLPFIEKEKAAQPGSSSSAGKILMATVKGDVHDIGKNIVGVVLACNNFEVIDLGVMVPAQKILQTAREEKVDMIGLSGLITPSLDEMMHVAREMEREGFDIPLLIGGATTSRIHTSVKISPGYSGPTVHVLDASRSVNVASNLMNTETRGEYIRKIAEEYRKAREQHLSKRSIKTYVSLQHAREHRTPIDWAATAITRPRFLGVKVFKDMNLSELENFIDWTPFFQTWQLHGKFPDIFQDKLVGTEAAKLFEDGQALLKRVIREKMLTASGVIGFWPANSVGDDIELYTDESRSEVLATIHTLRQQGEKAKGLPYHALSDFIAPKETGIADYWGGFAVTSGIGIEQHLEDFRKNMDDFNSILLKSLADRLAEAFAECMHEKVRKEYWGYAQGEHLSNEELISEKYAGIRPAPGYPACPDHTEKRTLFNLLQAEKNAGIELTDSYAMYPASAVSGFYFSHPASKYFGLGKIEKDQIEEYATRKGMGVEEVERWLAPNLAYEPASRV
>NZ_CP042432.1|WP_132129337.1|1812535_1812811_-|hypothetical-protein
METIQFIPGWTSFYIDGGIELDIVTEMKGLENLSFVECLGLASIANLEGINIPFLHINHLIENKKKTNRPKDQIDVMELEKIREIREKSEG
>NZ_CP042432.1|WP_132129338.1|1812894_1813074_-|hypothetical-protein
MEDKKKVDSNLPGSDHSRFDQETKRLRRDIFRSDEEKFNLFIRMLRTNALFKKAIVTHK
>NZ_CP042432.1|WP_132129339.1|1813299_1814358_+|PstS-family-phosphate-ABC-transporter-substrate-binding-protein
MKKIQLLFYVSFALAVSACGGNRSSKGLTGEITVDGSSTVYPITEAVAEEFRAVGPDVRVTVGVSGTGGGFKKFGRGETDISNASRPITASEVALCEENGVEFIELPVAYDGLAVVVNPANDFVDYLTVEELKKIWEPAAQGNINRWSQVREGWPDEPINLYGAGVASGTYDYFTEAIVGKAKSSRGDYTASEDDNVLVQGVANDKNGLGYFGLAYYQENAGKLKLVPIEDGNDENGAGPIAPSLETVSNGTYQPLARPEFIYINAESAQREEMKAFVNFYLENAPQLVEEVDYVPLETEAYELAAQKFERGVTGTIFGQGTSIVGVSMIDLLKQQVSADTVSGEKDSISVQ
>NZ_CP042432.1|WP_132129340.1|1814359_1815235_+|phosphate-ABC-transporter-permease-subunit-PstC
MRIREKIIEWLLFLCSAVTVLTTFGILFVLLSESVKFFSEISIIEFLTDKEWTPLFADKQFGIMPLVSGTLLTTFIAILVALPLGLTIAVYLNEYASRRFTEVVKPILEILASVPTVVYGFFALLFVTPLLQQLFPTMSGFNALSAGLVMGVMILPYVSSLSEDALRAVPQSLREAAYGMGSTRFQTAFRVMIPAASSGIIVSIILAISRAIGETMIVAIAAGQEPKLTLNPLQSVETITTYIVQVSMGDVPRDSLEYRTIFAAGITLFVFTFALNNVSVWIRKKYQQKYE
>NZ_CP042432.1|WP_132129341.1|1815227_1816085_+|phosphate-ABC-transporter-permease-PstA
MNSSQINRIKDQLFKFFAIICTAVGILVLLVLLFDVFSKGLGRLSWDFLTNLPSRFAERSGIYTALHGMIWMLILTILISFPIGIGAGVYLEEYGTKNRLSRFIEVNIANLAGVPSVIYGILGLQVFNRMLQLGNSLLTGALTLALLILPIIIVSTREAVKAVPKSLREASLALGATKWQTIRRVVLPSSFGGIITGLILSVSRAIGETAPLIVIGALVYVPFVPRGPMDEFTVLPIQIFNWTTRPQQGFVTNAAAAIIVLLIFTFFLNGIAVYLRNRWYRKIKS
>NZ_CP042432.1|WP_132129342.1|1815984_1816845_+|phosphate-ABC-transporter-ATP-binding-protein
MRLRLSLYCLSLPFSLTALLCISATGGTGKSNRSIQMFKLEAKNLDLYYGSKQALKNISMGIKPNTVTAFIGPSGCGKSTLLRCFNRMNDLIDNVRIEGEVLIDGRDIYHSRINLDDHRKKIGMVFQKPNPFPKSIFENVAYGLRINGVKHKKFIVETVERSLRQAALWDEVKDNLNKSALALSGGQQQRLCIARALAVEPSVVLMDEPASALDPISTSKIEELVHALKSKYTIVIVTHNMQQAARISDKTAFFYIGELIEYDDTSKIFTNPSHEKTQNYVTGRFG

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Crispr_ID: NZ_CP042432_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_7

1827189-1827264

Orphan

Consensus_repeat	Method
TTAATTTATATCTGGCCAAAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_7

>merge|NZ_CP042432|7|1827189-1827264|CRISPRCasFinder
TTAATTTATATCTGGCCAAAACTACAAAAAAAAGTGAGTTTTGGCCAATTATATGAATTTATATCTGGCCAAAACT

>NZ_CP042432|7|7|1827189-1827264|CRISPRCasFinder
TTAATTTATATCTGGCCAAAACT	ACAAAAAAAAGTGAGTTTTGGCCAATTATA
TGAATTTATATCTGGCCAAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129347.1\|1821885_1822083_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129357.1\|1830804_1831554_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270257
NZ_CP042432.1\|WP_132129343.1\|1816859_1817528_+\|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl\|CDD\|273990
NZ_CP042432.1\|WP_132129353.1\|1827274_1828414_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129354.1\|1828434_1829400_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP042432.1\|WP_132129345.1\|1819277_1820087_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP042432.1\|WP_132129356.1\|1830131_1830812_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NZ_CP042432.1\|WP_158640564.1\|1820182_1821787_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP042432.1\|WP_132129475.1\|1834064_1835279_-\|mannonate-dehydratase	unknown	unknown	gnl\|CDD\|235172
NZ_CP042432.1\|WP_132129359.1\|1832499_1833363_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187578
NZ_CP042432.1\|WP_132129362.1\|1835659_1836979_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP042432.1\|WP_132129358.1\|1831632_1832463_-\|alpha/beta-hydrolase-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|369561
NZ_CP042432.1\|WP_132129361.1\|1835520_1835691_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP042432.1\|WP_132129344.1\|1818671_1819241_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129360.1\|1833484_1833817_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP042432.1\|WP_132129348.1\|1822156_1823461_-\|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl\|CDD\|234628
NZ_CP042432.1\|WP_132129352.1\|1825733_1827164_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|376582
NZ_CP042432.1\|WP_132129349.1\|1823457_1824333_-\|GTPase-Era	unknown	unknown	gnl\|CDD\|234624
NZ_CP042432.1\|WP_132129351.1\|1825417_1825711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129350.1\|1824567_1825389_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129348.1\|1822156_1823461_-\|ribosome-biogenesis-GTPase-Der	gnl\|CDD\|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP042432.1\|WP_132129343.1\|1816859_1817528_+\|phosphate-signaling-complex-protein-PhoU	gnl\|CDD\|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	3.70973e-48
NZ_CP042432.1\|WP_132129352.1\|1825733_1827164_-\|AAA-family-ATPase	gnl\|CDD\|376582	pfam01637, ATPase_2, ATPase domain predominantly from Archaea. This family contain a conserved P-loop motif that is involved in binding ATP. There are eukaryote members as well as archaeal members in this family.	1.36581e-11
NZ_CP042432.1\|WP_132129345.1\|1819277_1820087_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.57954e-151
NZ_CP042432.1\|WP_132129356.1\|1830131_1830812_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	5.80712e-81
NZ_CP042432.1\|WP_158640564.1\|1820182_1821787_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	8.56029e-92
NZ_CP042432.1\|WP_132129475.1\|1834064_1835279_-\|mannonate-dehydratase	gnl\|CDD\|235172	PRK03906, PRK03906, mannonate dehydratase; Provisional.	0
NZ_CP042432.1\|WP_132129359.1\|1832499_1833363_-\|SDR-family-oxidoreductase	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.22495e-77
NZ_CP042432.1\|WP_132129362.1\|1835659_1836979_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.16597e-87
NZ_CP042432.1\|WP_132129360.1\|1833484_1833817_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.1973e-40
NZ_CP042432.1\|WP_132129361.1\|1835520_1835691_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	8.80108e-05
NZ_CP042432.1\|WP_132129357.1\|1830804_1831554_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270257	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins that serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. In contrast to the structure of the two ModA homologs from Escherichia coli and Azotobacter vinelandii, where the oxygen atoms are tetrahedrally arranged around the metal center, the structure of Pyrococcus furiosus ModA/WtpA (PfModA) has shown that a binding site for molybdate and tungstate is where the central metal atom is in a hexacoordinate configuration. This octahedral geometry was rather unexpected. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.53665e-96
NZ_CP042432.1\|WP_132129354.1\|1828434_1829400_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	8.16876e-37
NZ_CP042432.1\|WP_132129349.1\|1823457_1824333_-\|GTPase-Era	gnl\|CDD\|234624	PRK00089, era, GTPase Era; Reviewed.	6.22667e-144
NZ_CP042432.1\|WP_132129358.1\|1831632_1832463_-\|alpha/beta-hydrolase-fold-domain-containing-protein	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.19359e-44
NZ_CP042432.1\|WP_132129350.1\|1824567_1825389_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	3.21717e-12

>NZ_CP042432.1|WP_132129352.1|1825733_1827164_-|AAA-family-ATPase
MKNVTGRQDEKALLLEIETSGEPELVAVYGRRRVGKTFLILSVFNEKLAFEFTGTHHATLNEQLENFSLALTRASKSLPLATPPNWINAFSLLIDYLTPLIKKQRKVIFFDEFPWINTPRSGFLKAFENFWNGWASRQQNLVVVICGSAASWMIQKVINNRGGLHNRVTRRIRLMPFTLGETADFLKARKINLDHYQILQLYMAMGGIPHYLKEVKIGESATQAIDRTCFTKDGLLHDEFKNLYYSLFDNASSHMEIIRALARKNSGLSRNEIIKFSKLTSGGGMTRLLDELTESGFITAYIPFNRTSKDSIYKLTDEYSRFYLKFIENSRSRGKGSWIRFSNGTSWKSWSGIAFENICMKHASRLKRALGIENVYAEISVWHSRPRNEEKGVQIDLLIDRQDQCINICELKFSTAAFEITKSYAAELESKVAAFRNQTRTRKTLFLTMVTTFGIKNPQKYAGLIQHDLKMDILFG
>NZ_CP042432.1|WP_132129351.1|1825417_1825711_-|hypothetical-protein
MAWTTIFETIILLGATQGFIVSILLFVRKEPRLPNRLLGVLLFLMALASFCLYASFNSWFGYPLLEFLSYLIPLIIIMPFGPLIFFMSRHTWIRALH
>NZ_CP042432.1|WP_132129350.1|1824567_1825389_-|helix-turn-helix-domain-containing-protein
MIIDIVPQLAAIIFLLGVLWGLLKDNPRPWGNFIDQYNVYSDIPRWISVTVYLWLSERFLSGLKTKNDGQQYTDVKWLRHFVRIFLVFQLIWLLYLIPYVIPRYTDFMLDTFDWYPIYVPLALLIYWLGIKGYSMSYRLASRPPAKGSPSQSLSGEIVAQSIRQLQKAMEEDKLFLDRSFSLQRLSAHTGIPQKTISAVLNQHIDKSFNEFVNSYRVSTVKTSMLKPESRKLTIAALAFDAGFNSLATFQRAFKASENMTPKEFLSLHEKKRA
>NZ_CP042432.1|WP_132129349.1|1823457_1824333_-|GTPase-Era
MTHKAGFVSIIGKPNAGKSTLMNAMVGEKMSVITSKAQTTRHRIIGIVNEPDMQMVFSDTPGMIEPKYGLQKSMMSSVNESLTDADVVLLVTDVNERHDESRMVEKLKRLEAPVAVLINKADTSDEATLKEKVLYWEQTLQPKAVFVISAREGYNVQAVYEFIKENLPEHPPFYGEDELTDRNERFFVSEIIRGKIFEHCRKEIPYSTEVVINSFKEEPGINRISAEIITERDTQKGIIIGKNGELLKKIATASRLEMEEFLQKKVFLEVHVKVIKDWRNRENYLKQFGYE
>NZ_CP042432.1|WP_132129348.1|1822156_1823461_-|ribosome-biogenesis-GTPase-Der
MSNIVAIVGRPNVGKSTLFNRLTETRQAIVDNVSGVTRDRHYGFAEWTGRPFTVIDTGGFVAHSEDVFEKAIREQVHIAIEEATVLLFVVDVTTGVTDMDDHIAALLRRSNKPVLVVANKVDNNKQLPDIHEFHSLGLGEIFGIAANSGSGTGELLDAVVSHLNPDAETDKEKLPGFAIVGRPNVGKSSLINALLGKDRNIVTTVAGTTRDAIETTYNQFGYEFRLIDTAGLRKKTKVKENIEFYSVMRTIKAVEQADICILMIDAGSEFESQDVNIFHLAEKKRKGVVIVVNKWDLIEKDQASTRHYEKQIREKIAPFTDVPILFTSVPEKQRILKVIETAFKVFKNREKHIPTSKLNDVMLEVINQTPPPSLKGKYIKIKYITQLKSASPAFAFFCNLPQYIKDPYKRFLENKLRENFDFSGVPVSIYFRQK
>NZ_CP042432.1|WP_132129347.1|1821885_1822083_-|hypothetical-protein
MKKVFALLLSAGMFAAVACNPQASQESEEKALQDSLEMAAQADSIAAAEQAAAEESADSVSADSL
>NZ_CP042432.1|WP_158640564.1|1820182_1821787_+|S41-family-peptidase
MYNLRLAMAGALIMVLGMYFGSKMNDNSGLRSAFDFPFNFRKSDKLEEIMELIEERYVDSIDFARLERNALEEILKHLDPHSSYIPASEFKRMNAKLKGRFDGIGVEFRMMNDTVLAVTVERDGPAEQAGIRPGDKIITVDGTTVSGEGMTNGSIVNLIRGPEGTSVRLEVKRYKTPDILEFDVKRGKIPINSVEVSFMLNEETGYIKVNRFAASTHSEFVLAAGELKDLGMINMVLDLRNNGGGYLSQAIALADEFLTRRQLIVYTEGYNYPKEEYFATSNGLFEEGKLVVLINEGTASASEVLSGALQDLDRATLIGRRSFGKGLVQRQTTFPDGSALRLTIARYYTPLGRSIQKPYSQGTDVYFQELSRRLERGELYSLDSMEAAFPDSLKVVTAAGKVLYGGGGILPDIFVPVDTVGVTAFYRELYANDVVYDFTYRYIDRQMASLSAYESLDDFAASFSLADSSFARLVSLAAEEEVRAPEPEVSASEALLKNQVKALIARRFWGYAGFYKVTLTRDEAINQALQVISE
>NZ_CP042432.1|WP_132129345.1|1819277_1820087_-|N-acetylmuramic-acid-6-phosphate-etherase
MKRITESDSSYDNLENMETGEILSSINKEDQTVPLAVAKAIPAIEKLVDVIINKMKAGGRLFYIGAGTSGRLGILDASECPPTFGVDHNTVIGLIAGGDKAIRKAVEFAEDNKTQAWKDLLSYNIGKNDVVVGIAASGTTPYVIGGLEEANRNGLETGCIVCNEGSPVARSARHPVEVVVGPEFVTGSTRMKAGTAQKLVLNMISTSVMIKLGRVKGNKMVDMQLSNTKLVDRGIRMIMNALKTDQETAEKLLKEFGSVRKAIDGNQKV
>NZ_CP042432.1|WP_132129344.1|1818671_1819241_-|hypothetical-protein
MHELEPFYKWRDDYIASEDSKSPFYKQQYSEFLFDKQIYNYYIHPQWDYFGSQTLYLKILFADYDNNYCIIELIGEWNDCINNDIMFLKRYVAEWLMQHGINKFILIGENILNFHVSDDCYYEEWFQEIEDGWIAFINFREHVIEEFRSQNIDYYVNFGGELDTLNWRTLQPQQVFQKVEYVLSRRLSA
>NZ_CP042432.1|WP_132129343.1|1816859_1817528_+|phosphate-signaling-complex-protein-PhoU
MKHLEEDLQRLKSNMVDMSNLVISQIHKGITALINNDKAMAREVIFNEKRVNAYELRIDKDCENIITLQNPMAHDMRFVFATLKINSNMERIGDNAEGIAKYAMDVEKDLDNALIEKTRLLEMTDTVKLMIANAAEAYLNNNGNLGRAIFNQDMILDEINAQATGIIADYVKHNPDNIIQALYLLSIIRKLERVGDHITNIAEEVIFYLEAKILKHGKKDED
>NZ_CP042432.1|WP_132129353.1|1827274_1828414_-|hypothetical-protein
MISEPTYLAARMVSSTLEAHFTEHWDAGCFGKKEEKQLPPAAYIEAIIDAAFWASLQREEGYSPKISLAFLKPAQAGKPLIFGQKVRLTPYNLVKLSPAVTQPGIHLGVWHEDNDLYIWGSTHFIPEFCFVLEVVEPGLLVVKHKQIGGFGKFVNVAILKGDQIKIVDKNSIASDTSPSLLTSLLGHPMSLRTGEAVNVLVELAASIRSHGKGALVLVVPPGTQKWRESVIHPISYPVIPAYEALADLLQMDEHQRGTPEWQESFLRAVDIVGGFTAVDGATILTQQHSLLAFGAKVARAAMSDPAEQVMMTEPVSGSEARIVHPAKIGGTRHLAAAQFVHDQRDSIALVASQDGRFTVFVWSEKLSMVHAHRIDVLLL
>NZ_CP042432.1|WP_132129354.1|1828434_1829400_-|sterol-desaturase-family-protein
MFDNYISLEEIGAADWPNVILWAAPVMFILVFAEWGLSIYQNKDVYDKKDFLAAATIGLVNVGISALLKVIVFGAVLFFWNLVPWKIPATWWSFIPCFILLDLARYWAHRVAHEQRFWWATHVTHHNSQKYNFSVSFRLSWTQHIKFIFFVPVVMVGFDPFVFFICHQVAVLYQFWIHTEYIKKLPAPIEYIFTTPSHHRVHHASDKKYLDKNYGSTFIIWDRIFGTFMEEDERPHYGITKPVKSYNPIYLVFHEWADIVRDMKKARNFKEGFRILFSPPREEIAPNEPVTDAMATADSAVAEEAAIRNTPAVKKEVQQEG
>NZ_CP042432.1|WP_132129356.1|1830131_1830812_-|molybdate-ABC-transporter-permease-subunit
MINWEPLVLSFKLAFITTLLLLALSVPLAYWLACTRTRIKPLIEALISLPLVLPPTVLGFYLLIAFSPAGAFGSWLDQWIGLRLVFSFEGLVLASVIYSLPFMVQPIQSGLSGISPSLAEAAHVLGKSKTTTLFKVLLPNIKPALLTGIVLTFAHTLGEFGVVLMIGGNIPGRTRVASIAIYNEVEALSYGTANKYSLVLLAVSFFILLIVYLVRGGYLFKSGWND
>NZ_CP042432.1|WP_132129357.1|1830804_1831554_-|molybdate-ABC-transporter-substrate-binding-protein
MKKARTIFLVLSCLLPAGCRPENSENLVIAAAANTRFAMEELVAAFSRETGIMCETIFASSGKLTVQIRQGAPFDVFIAADMNYPEKLFREGFSKKPPRLYAYGKLVLWSSDTSRLLAGKNVNHIALANPRTAPYGQAAVEALKSFALYKAVESKLVYGESISEVNHFIISGTAEMGFTSLSSVMAGEMKGKGQWILIDTASYSRLTQGAVLLKRSKRRPQAQRFYDFLLSHKGKQILREFGYKVNQND
>NZ_CP042432.1|WP_132129358.1|1831632_1832463_-|alpha/beta-hydrolase-fold-domain-containing-protein
MDSIANKINADRAFFNDLGTIYPADKRVGITQEHIAGVSCYWFTPSQVEEERLIVYLHGGSFGLGSIQSHRAMVSHLASALTSKILFVEYSLAPEKPFPNAVNDVFSVYQQLILRSPKEKISLIGDSAGGGLAASFIHKAASEQIALPSCVVLISPWINLYCDTGSHITRKDMDKVLTKELLLEYAGYYANGNWEEADPARLNFERFPPLFILVGSDEILFDDSRIFYEKIRILQANCEMREYTNQGHVWLLADIDSASSKEALIHIDAFLRRTAG
>NZ_CP042432.1|WP_132129359.1|1832499_1833363_-|SDR-family-oxidoreductase
MILVTGATGRLGSATIEHLLKHVSPESIVAFARDERKAKHWKETGVKVRFGAYDDTESLVRAMRDVEKILLVSAPDPNGRLQRHRNVLNAAKKAGVKHIAFTGMATNDIRTSVIKPFMEDLFNFEDELRESGMIYTILRNTLYTDGIALFAGENVFRTGIFLPAGHGRVAFALRREMGEAAANVLLQTGHENKTYIFTGSRLYSYEDVARVLSELSGKDITYTAADPGTFSDTLKGLGIPEIVVFVVNGFSADVSNGQYESVSRDLEIVLAREPASLKDGLKEVYNF
>NZ_CP042432.1|WP_132129360.1|1833484_1833817_+|helix-turn-helix-transcriptional-regulator
MVEEKQNFECPITAMLELIGGKWKPIILYNLTFGTRRFGELAFRISGISRKVLTEQLKELEKDGLISRKQYQEIPPRVEYSLTGLGNSLVPVFKEMAGWSYEHVLGKGSC
>NZ_CP042432.1|WP_132129475.1|1834064_1835279_-|mannonate-dehydratase
MEQTWRWYGPGDPVSLADVMQAGASGIVTALHHVPNGEIWTVEEIEKRKQDIRLDLKNSRERDLRWSVVESIPVHEDIKIRSGNYKTYIEHYKQSIRNVGKCGIKVICYNFMPVLDWTRTDLAWEVADGSRALRFDAVHFAAFELFLLKRPGAEAVYGPEMTEKAQAFISSATVEEKELLIRNIIAGLPGSEASYSLAQFQAMLDTYRETGAAELRENLKEFLKAIIPVAAEEGVRMAIHPDDPPYPILGLPRVVSTEADARQVLDAVDDPANGLCFCTGSYGVRPDNDLAAMAERLGSRIHFVHLRSTQREADGSFYEANHLEGNVDMFAVVKALVKEQQNRRQQGRADHNIPMRPDHGHQMLDDLHKQTNPGYSAIGRLRGLAELRGLEMGIERSLPENSFA
>NZ_CP042432.1|WP_132129361.1|1835520_1835691_-|pentapeptide-repeat-containing-protein
MRRNWNGPNYKLESFKFIVSGSRFHGSRFQGSRFQGSRFHGSRFHGSRFEGSRFKV
>NZ_CP042432.1|WP_132129362.1|1835659_1836979_-|MFS-transporter
MNRFLKGYRWRILALLFFITTVNYIDRQVISFTVIDEEFQRAIMNIPEGDAITEEHHAEFNEVKGWIDASFKIAYALGFILVGWFVDRIGTRKGFASAMTIWGFAAIGTGFVGSIGGLLSLRFLLGFGEAGNFPASIKTVAEWFPKRERSFATGIFNAGTNVGVILTALFVPWIILSWGWEYSFIITGLVGFVLLYFWLKMYKRPEEHENISKEELELINSDADEKDNADVTKVPWARLFKYRQTWAFAAGKFMTDCVWWMFLFWLPSFFQDSQSLDQNLDLKSIGLPFILIYLVSDVGSIFYGWLATRFIEKGWTVNKARKVTMLICGITVIPIFFASMTDSLVVAIALIAIATSAHQGFSCNLFSLVSDMFPKKAVASVVGIGGVWGAIGGTILTAATGYIVNAAGYLPIFIYASCAYLIALLLIHLLAPKLERAKL

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Crispr_ID: NZ_CP042432_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_8

1848510-1848605

Orphan

Consensus_repeat	Method
CCCCGGCGCCGCGCGCGAATGCCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_8

>merge|NZ_CP042432|8|1848510-1848605|CRISPRCasFinder
CCCCGGCGCCGCGCGCGAATGCCGCGAGGCGATGTTGATTCTCCGAACGGCGAGACCGGGCGGGCCAATGCCCCGGCGCCGCGCGCGAATGCCGCG

>NZ_CP042432|8|8|1848510-1848605|CRISPRCasFinder
CCCCGGCGCCGCGCGCGAATGCCGCG	AGGCGATGTTGATTCTCCGAACGGCGAGACCGGGCGGGCCAATG
CCCCGGCGCCGCGCGCGAATGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129476.1\|1854409_1856155_+\|M61-family-metallopeptidase	unknown	unknown	gnl\|CDD\|226483
NZ_CP042432.1\|WP_132129368.1\|1845630_1846965_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129370.1\|1848644_1849949_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP042432.1\|WP_132129367.1\|1841754_1845507_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173791
NZ_CP042432.1\|WP_132129366.1\|1840208_1841678_-\|tagaturonate-reductase	unknown	unknown	gnl\|CDD\|235147
NZ_CP042432.1\|WP_132129374.1\|1857918_1859616_+\|gamma-glutamyltransferase	unknown	unknown	gnl\|CDD\|223482
NZ_CP042432.1\|WP_158640565.1\|1865201_1866029_-\|CHRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377837
NZ_CP042432.1\|WP_132129371.1\|1849964_1853087_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP042432.1\|WP_132129363.1\|1837005_1837671_-\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|235939
NZ_CP042432.1\|WP_132129475.1\|1834064_1835279_-\|mannonate-dehydratase	unknown	unknown	gnl\|CDD\|235172
NZ_CP042432.1\|WP_132129362.1\|1835659_1836979_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP042432.1\|WP_132129373.1\|1856195_1857953_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|341233
NZ_CP042432.1\|WP_132129376.1\|1862038_1863220_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181626
NZ_CP042432.1\|WP_132129361.1\|1835520_1835691_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP042432.1\|WP_132129369.1\|1847091_1847550_+\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP042432.1\|WP_132129372.1\|1853086_1854145_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP042432.1\|WP_132129377.1\|1863323_1865102_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850
NZ_CP042432.1\|WP_132129379.1\|1866200_1868657_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl\|CDD\|181856
NZ_CP042432.1\|WP_132129364.1\|1837742_1838777_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP042432.1\|WP_132129365.1\|1838800_1840204_-\|glucuronate-isomerase	unknown	unknown	gnl\|CDD\|376859

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129476.1\|1854409_1856155_+\|M61-family-metallopeptidase	gnl\|CDD\|226483	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only].	1.04287e-158
NZ_CP042432.1\|WP_132129370.1\|1848644_1849949_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.53339e-38
NZ_CP042432.1\|WP_132129367.1\|1841754_1845507_-\|S8-family-serine-peptidase	gnl\|CDD\|173791	cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases. Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases.	1.07149e-47
NZ_CP042432.1\|WP_132129366.1\|1840208_1841678_-\|tagaturonate-reductase	gnl\|CDD\|235147	PRK03643, PRK03643, tagaturonate reductase.	0
NZ_CP042432.1\|WP_132129374.1\|1857918_1859616_+\|gamma-glutamyltransferase	gnl\|CDD\|223482	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism].	0
NZ_CP042432.1\|WP_158640565.1\|1865201_1866029_-\|CHRD-domain-containing-protein	gnl\|CDD\|377837	pfam07452, CHRD, CHRD domain. CHRD (after SWISS-PROT abbreviation for chordin) is a novel domain identified in chordin, an inhibitor of bone morphogenetic proteins. This family includes bacterial homologs. It is anticipated to have an immunoglobulin-like beta-barrel structure based on limited similarity to superoxide dismutases but, as yet, no clear functional prediction can be made. Its most conserved feature is a GE[I/L]RCG[V/I/L] motif towards its C-terminal end Most bacterial proteins in this family have only one CHRD domain, whereas it is found repeated in many eukaryotic proteins such as human chordin and Drosophila SOG..	1.55899e-20
NZ_CP042432.1\|WP_132129371.1\|1849964_1853087_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP042432.1\|WP_132129363.1\|1837005_1837671_-\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl\|CDD\|235939	PRK07114, PRK07114, bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase.	1.44866e-129
NZ_CP042432.1\|WP_132129475.1\|1834064_1835279_-\|mannonate-dehydratase	gnl\|CDD\|235172	PRK03906, PRK03906, mannonate dehydratase; Provisional.	0
NZ_CP042432.1\|WP_132129362.1\|1835659_1836979_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.16597e-87
NZ_CP042432.1\|WP_132129373.1\|1856195_1857953_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|341233	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases. This family includes long-chain fatty acid (C12-C20) CoA synthetases and Bubblegum-like very long-chain (>C20) fatty acid CoA synthetases. FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Eukaryotes generally have multiple isoforms of LC-FACS genes with multiple splice variants. For example, nine genes are found in Arabidopsis and six genes are expressed in mammalian cells. Drosophila melanogaster mutant bubblegum (BGM) have elevated levels of very-long-chain fatty acids (VLCFA) caused by a defective gene later named bubblegum. The human homolog (hsBG) of bubblegum has been characterized as a very long chain fatty acid CoA synthetase that functions specifically in the brain; hsBG may play a central role in brain VLCFA metabolism and myelinogenesis. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_CP042432.1\|WP_132129376.1\|1862038_1863220_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181626	PRK09052, PRK09052, acetyl-CoA C-acyltransferase.	0
NZ_CP042432.1\|WP_132129361.1\|1835520_1835691_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	8.80108e-05
NZ_CP042432.1\|WP_132129369.1\|1847091_1847550_+\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.00107535
NZ_CP042432.1\|WP_132129372.1\|1853086_1854145_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.04469e-69
NZ_CP042432.1\|WP_132129377.1\|1863323_1865102_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	2.94953e-141
NZ_CP042432.1\|WP_132129379.1\|1866200_1868657_+\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl\|CDD\|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
NZ_CP042432.1\|WP_132129364.1\|1837742_1838777_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	5.92935e-92
NZ_CP042432.1\|WP_132129365.1\|1838800_1840204_-\|glucuronate-isomerase	gnl\|CDD\|376859	pfam02614, UxaC, Glucuronate isomerase. This is a family of Glucuronate isomerases also known as D-glucuronate isomerase, uronic isomerase, uronate isomerase, or uronic acid isomerase, EC:5.3.1.12. This enzyme catalyzes the reactions: D-glucuronate <=> D-fructuronate and D-galacturonate <=> D-tagaturonate. It is not however clear where the experimental evidence for this functional assignment came from and thus this family has no literature reference.	0

>NZ_CP042432.1|WP_132129369.1|1847091_1847550_+|carboxypeptidase-regulatory-like-domain-containing-protein
MRNLAIHTTLCGFFLLLLTGQTTPGCQSQQGIEGKIVFESGNQMPGPGVQREPAKGVKRELLIYPLLKATELEAEGNGFYSEPAQPPVKTVTSNDDGSFRVQLPPGNYSLLVREKEKLYANLSDGAGHIHPVEVKPNEMLQIEFKITYAAHY
>NZ_CP042432.1|WP_132129368.1|1845630_1846965_+|hypothetical-protein
MFTLTTILCTLMRDTRYLAAAFLLISMLYASCGRQLPEPKPGMAASGEQRKPATPAERELVKKIREVAAVLNSIYHDPSVVAEVNAAIASGFYEDERVLLADLLYPEESALYSFMHERKTEAGEAISWGSFSRKFREAAPEILNPERAAGIIALVKRSEPGLRRMETANENQGLSGTALSIYYPYSEDFPPGQHPLAVPATVEADWVDVADPACGKAHEHRATDCDKIRIDENYVRENPVHIIGSGAEPAAVARENALLSGGQDFSPALIYLGKVKCTRQYDRLISFTGNGGGSELKFIRGEAYITLNNDQQVVNTEFDVISVHFRRKDIRKEREKAVYAIWDPNWDTARVEQVFGIYEADTRGEREFSGAVDTEIEHPGGETTITPVSYSYTVSTQDNIIRQINWARASFFRYNRSGLAGCGLRNGYTWYDCRLPVSYSLPEL
>NZ_CP042432.1|WP_132129367.1|1841754_1845507_-|S8-family-serine-peptidase
MKPYLFLILTLASIFPARGQESGVPLSNRAPLVRLAGKYKAVGDLRSDIALRLAREKNWPVFQQLPGGGVIRLERIDKLGLPVYTLTSNNIRSAATTGTDLLWPGGSSGLNLRGASPLLLSRLGIWDGGATLASHQEFGGRIVQKDRALPANQHATHVAGTLVAAGINRPARGMAFGASNLIAYDFLNDNAEMAREAPMLLVSNHSYGALAGWRFNEGQNRWEWYGESGTNEDYKFGYYDITAREWDEIAWNAPYYLIVKSAGNNRNVNGPAEGSAYYRYNKEGVMAPAPGDAPFPSANDGYDILPLYANAKNILLVGAVNPIPAGYSEASDVVMASFSGWGPTDDGRIKPDIMGNGVGVLSTSSASDDGYTILSGTSMSSPNVAGTLFLLQELYSNLHEGEFMRSATLRGLAIHTAGEAGASPGPDYRFGWGVLNAGKAAEVILNTSGSHRILEASLEQGTQDSYELLASGYAPLEVTICWTDPEADTISEEQALDNPSPRLVNDLDVRAGSPGNNERFYPWILNPSQPAAAAEKGDNVLDNVEKLVIPAPVHGRRYVVTISHKAALKRGPQPYSLIISGAGGTSYCSSGAQENTGLSISSIQAGTLNYTAGEECTTYTNLLGEYIQARPGAIVPFSIQTGSCGSSGSHTIKVFGDWNNDGDFTGEGELLAVSAVLTGNSTFEGNIHIPSSLSAGAFIRLRIVAVSTSSAAEVSPCGAYQKGETLDTSIEIIKPARDLSVEALISPSASGFCPGGRNLLSILLRNRGTEALEGFPLNAEIREGASVIASLQETFNGILQPGDTAVYTFPYFIAAAPATRYTFTVHAGPDDDQVIANNSLEAVRQSNTAADSPAGIRALICEDGQKAVLIDEEQETVYWYDQLQGGNLIGAGDTVTTAFTGSNTTFYGAINEFSGRLGPATKSDLPPVTQGDAYHQYTPSVMIETKVPLVIESARMYTGNPGKISFTVYDNGGTEIARSVQHVGASRSTAAPGPLPDDPLDTGRTYYLDLRIPRPGNYLITVDYEGTDASIFRSTSSPDYPYSIPGIMSITGTTASQEAENNYYYFYGMSVSALGCPGPRTAVQGTPLEAPGITQVGDTLFSSRGTELQWYLNGEPLEDETGARLQAKVSGTYQVTTSLGNCIVFSEPYSFTTLDDLISGLENHGLIIYPNPGTANRETPLTIEFYAREQDDAEVRVVDMQGKILYREKPRLQSGKNTIPLILEHLSPGIYALSLSINGESFAGKFIIHR
>NZ_CP042432.1|WP_132129366.1|1840208_1841678_-|tagaturonate-reductase
MDEILSRKLVETTEKQEIKELSKGIRFDLPEKILQFGTGGFLRGFTDYLVDKANKQQLFNGSILVVKSTPGQPGNFARQDNLYTVNIKDKEINEFVLAAALNRVVSATDQWELVLEAAQSPSLQLLISNTTEAGLQYLEEDLSTGKTPASFPGKVAVVLHERFKASGGSPESGLVILPCELVVNNGKVLQEMVVKLAGKNNFEPEFIKWLNDANHFCNTIVDRIIPGKPDPGQQQETFARLGYTDQLLLECESYLLWAIEGGQRVKDVLEFAKADDRVIITDDIEPYREQKLRLLNGTHTFSVPLAFLCGQETVYQAVNDPLVSRFMQQLMQVEIAPTLEGISPRPSSYARQVFERFQNPHIVHKLINIMFQQSTKMKLRNAATIQRYFKLEGKAPRHMALGLAAYLLFMKNAADLAVEDDMAVWFKELWAGNSPGKVVNATLEKLALTKDAEQTALFAAAVLSFLEQLLQTPAREVLEQFLNTTPARP
>NZ_CP042432.1|WP_132129365.1|1838800_1840204_-|glucuronate-isomerase
MESFLSEHFLLQTESARLLYHDYAAGMPVIDYHNHLPPAEIAADRRYENMTQLWLHGDHYKWRAMRANGVEERYITGDADDETKFIKWAETVPYTMRNPLYHWTHMELRNPFGITDILNSQSAGAIYRECNRQLQETFSARSLLRHYRVEALCTTDDPCDSLEHHLAIARDPFGVRVLPAFRADKALAIENPEAFNQYMDRLSEAADIDISNYSSLLEALKARHDFFHQAGCRVSDHGLDTFYSEEYTDEEVLLIFLKVREGTVPSPAETAKFKSALLYFLAVMDYEKGWVQQFHVGALRNANSRLLSKLGADAGVDSIDDLVHARRMMRFFDRLDREEKLARTIVYNLNPADNEIFATMMGNYQDSSIPGKMQFGSGWWYLDQKDGMEKQLNTLSNIGLLSRFIGMLTDSRSFVSFPRHEYFRRILCNLIGRDVENGELPNDTKWLGQMIQNICYYNAKTYFSFLP
>NZ_CP042432.1|WP_132129364.1|1837742_1838777_-|sugar-kinase
MKSIVTFGEVMLRLATPGYQRFQQAKQFEASFGGGEANVAVSLANYGLPARFVTRLPDNDLSDALISELRGLQVDTGSILRGGERLGIYFLETGSVSRSSKVIYDRAHSSISSIAPGMVDWDKVFEGVRWFHWTGITPAISQGAADVCLEGIRKANEKGITVSCDLNFRKNLWKYGKTASEVMPELVAGCDVILGNEEDAEKVFGIHPEGADVTSGHVEAAGYESVCRQLMQRFTRAKKAIITLRGSINANHNSWSGVLFDGNKLFTAPTYQITHIVDRVGGGDSFMGGLIYGLVTYEGDDQKALNFATAASCLKHTIQGDYNRVTVAEVEKLMSGDASGRVSR
>NZ_CP042432.1|WP_132129363.1|1837005_1837671_-|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MARFSRLEVYGALHATKFVPLFYNEDPETCKEVFRACYRGGVRVIEYTNRGDFAHEIFAELSRFVKKELPDLVFGAGTIMDAPTAALYIQMGADFIVAPVIKSDVALLCNRRKIAWMPGASTMTEISSAEELGAEVVKLFPANILGPDFIKALKGPMPWTSILVTGGVEPTRENLTKWFKAGAACVGMGSSLFPKELIRNKDWDQLEDTARSALEIIQSIK
>NZ_CP042432.1|WP_132129362.1|1835659_1836979_-|MFS-transporter
MNRFLKGYRWRILALLFFITTVNYIDRQVISFTVIDEEFQRAIMNIPEGDAITEEHHAEFNEVKGWIDASFKIAYALGFILVGWFVDRIGTRKGFASAMTIWGFAAIGTGFVGSIGGLLSLRFLLGFGEAGNFPASIKTVAEWFPKRERSFATGIFNAGTNVGVILTALFVPWIILSWGWEYSFIITGLVGFVLLYFWLKMYKRPEEHENISKEELELINSDADEKDNADVTKVPWARLFKYRQTWAFAAGKFMTDCVWWMFLFWLPSFFQDSQSLDQNLDLKSIGLPFILIYLVSDVGSIFYGWLATRFIEKGWTVNKARKVTMLICGITVIPIFFASMTDSLVVAIALIAIATSAHQGFSCNLFSLVSDMFPKKAVASVVGIGGVWGAIGGTILTAATGYIVNAAGYLPIFIYASCAYLIALLLIHLLAPKLERAKL
>NZ_CP042432.1|WP_132129361.1|1835520_1835691_-|pentapeptide-repeat-containing-protein
MRRNWNGPNYKLESFKFIVSGSRFHGSRFQGSRFQGSRFHGSRFHGSRFEGSRFKV
>NZ_CP042432.1|WP_132129475.1|1834064_1835279_-|mannonate-dehydratase
MEQTWRWYGPGDPVSLADVMQAGASGIVTALHHVPNGEIWTVEEIEKRKQDIRLDLKNSRERDLRWSVVESIPVHEDIKIRSGNYKTYIEHYKQSIRNVGKCGIKVICYNFMPVLDWTRTDLAWEVADGSRALRFDAVHFAAFELFLLKRPGAEAVYGPEMTEKAQAFISSATVEEKELLIRNIIAGLPGSEASYSLAQFQAMLDTYRETGAAELRENLKEFLKAIIPVAAEEGVRMAIHPDDPPYPILGLPRVVSTEADARQVLDAVDDPANGLCFCTGSYGVRPDNDLAAMAERLGSRIHFVHLRSTQREADGSFYEANHLEGNVDMFAVVKALVKEQQNRRQQGRADHNIPMRPDHGHQMLDDLHKQTNPGYSAIGRLRGLAELRGLEMGIERSLPENSFA
>NZ_CP042432.1|WP_132129370.1|1848644_1849949_-|TolC-family-protein
MKKTVRIFLTIGTSIIFTGASSQDIFTLEDAVRTGLENNYSIKISAGDEEIAATNLGMAKSALFPSLELTGGADGRSTNSDLTFFDGRVQSRKNAQSSSYNAALALDWTIFDGFGMFASIDKYEELKSIGSLNARLTVLNTVSDIVSTYYDIVRLKQELKSIAEALDISRLRVNQADDRYFVGTGSKLELLNSRVDFNEDTSSFVSQQEAVKTAKTRLNEILARDLSTTFDVADTIIIDMDLRYEDLRTRLIEENPQLAIAQARKKVAELEYKEIRANRYPTVSVNSSYNFVKSDSESGQLLSNQSYGLNYGITASMNIFSGFLQKKQERSAQIVVENQQLVYDQLLQTVESDLTIAFSNYENSKVLMQLEEENREVARQNLDITLEMFRLGNITQLELREAQQNLLLAENRFIDAKYQAKLAEIALKELSGAF
>NZ_CP042432.1|WP_132129371.1|1849964_1853087_-|efflux-RND-transporter-permease-subunit
MSLSTTSIKRPVLAIVMNLIIILFGVLGYTFLGVREYPSIDPPIVSVRTTYTGADAEVIESQITEPLEKEINSIEGIKNISSASNQGSSSITIEFNLDRDLEGAANDVRDKVSRAVRNLPEDIDGLPVVSKADANASSIIAMTLQSDIRTHLEISDYAENYVAQRLQTIAGVSRVQVWGEKRYAMRLWLDPGKLASYGLTPLDVRNALNRENIELPSGKLVGSNTELLIRTAGNLTTEEEFNNMVLLNDGANLLRLRDVGKASLEPENLETNLRESGKTMIGLAIVPQPGANYLDIAEEFYERFEQLKSELPPDYKINIAFDDTLFIKQSVTEVAETILIALALVILIIFIFFRDWSIAFRPLIDIPVSLIGTFFIMYLLGFSVNILTLLAIVLATGLVVDDGIVVTENIFKKLEEGESPIQAAIKGANEIFFAVISISVTLAAVFLPIIFLEGFVGRLFREFGVVIAAAVLISAFVSLSLTPMLNAFLLKKRGHKHTRFYERTEPLFEKMNAGYAGSLNNFLNRRWLALPILALCLGMIALFWVLLPKETAPYEDRGALRLSMSMQEGASYEYTDAYMMNLIELINDSIPEKNILLTVTSPGFSGSGAANTGFGFIRLKPAGDRERSQEEIANKINQLTKNYTAGRVFVTQQPTISVGRRGGLPIQYVLQAPNFEKLEAHLPEFMAEVNKDPTFTITDVDLKFNKPELSIMIDRGKASSLGVSVMDIAQTLQLAFSGGRFGYFTMNGRQYSVIGQFPDANRNEPLDLTSLFVRNNQGEIIQMDNLVKIEETSSPPQLYHYNRFMSATVSAGLAPGYTIGDGIEAMDGIADRVLDDTFSTALSGEARDYTESSSNTFFAFIMALILIYLILAAQFESFIDPFIIILTVPLAVAGAFLSLWLFGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKEQGLSKAEAIRRGAVSRLRPILMTSLAIAIGALPIALALGAAATSRIGMGVVIIGGTLFSLVLTLYVIPAMYSYWSKEGSNLSFAEEEEETAPEKEVKELASIT
>NZ_CP042432.1|WP_132129372.1|1853086_1854145_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKFKHVVYALIILVVGFLVYRRISASAGNATAGGQGAGMQTMSVNAYVVKPGSISDKIIITGSIQANEEVNIRPEAAGIITGIHFQEGKPVSKGALLLKINDSELQAQLSKALTMQKLAAEKEYRQRQLLEKGGVSKQDYDAILAELNSLKAETRLIEAQIEQTEIRAPFSGKIGLREVSLGDYVDPSTVITSLVDNNPAKIVFSAPEQYANNIPDNATINFTVKGIDKKFTANVYARGANINVGTRTLELKAMVPNDDNLLIPGSFAEVELVLTQTNNALLVPTESIIPVMNGQKAYVTRNGKAEEVMVETGIRNDSMVHITSGLKAGDTIITTGIMTLTPGVPVQLKTIQ
>NZ_CP042432.1|WP_132129476.1|1854409_1856155_+|M61-family-metallopeptidase
MTTSLAKGDDLNLSYELSFEEPYTHYAEVSMTVSGLDREYVDLKMAVWAPGSYLIREFSKNVEAFKAESSGKELNSGKISKNTWRVFTGGAAEITVNYRVYAFEMSVRTSFIDSDHAYLNGTSIFMYVDGAQELPATIKINPYREWKQISTGLEADAADPFLLSSPNYDILADSPIEIGNQDIIEFEAAGLPHEVAIYGGGDYDREKVIADFTKIIEEQTAIFGDHPCERYVFIVHFLASGGGGLEHLNSTTLQFPRQAVESAQGWASFLGLVAHEYFHLWNVKRLRPAALGPFNYEAENYTHMLWVSEGFTAYYDDWTVRRTGFYSPEEYLEKIAGVIGTVENTPGNRVQPVTEASFDAWIKYYRPNENSYNTTISYYSKGAILGMLIDMSIRENSKGKHSLDDLMRYMYDRYYKELDRGFEDAEFKEAVEKFAGDMDDFFENYVWGTEEIPYNEFFDAVGLKLVESQPRTGEAYLGASFEQTGNGLVVSRVVRGTAAYTSGINVNDLLLSVNGKAVADVESLLEGRKPGDELSLKLLRNGMVRTIGVVLGGNENSSFRFEKISNPGAQQQENYKAWMGL
>NZ_CP042432.1|WP_132129373.1|1856195_1857953_+|long-chain-fatty-acid--CoA-ligase
MSITRVSDLLGLYMNRYRKADVFAARREGQWTCCSSDDFVRFANEISLGLLALGVRKGDKLGIMSPNRPEWNFVDFGAMQIGAVTVPLYPTMSAHDLEYVLKDAEIKVLFIGGAELYEKTNSLQDAVPGISLFSFEQVEGVRSWEDVKNMGKGKDAAAIEPIRLAQQPDDLLTLIYTSGTTGNPKGVMLTHRNIISNMLSCEPLLPESLRKALSFLPLCHIFERMVSYLYLYKGISIYYAESIESIASDIKEVQPDVFTTVPRLLEKVYDKIVAKGGDLSGIKKVLFYWALGLGLQYDPGKAGNAWYRLRLRLANRLIFSKWRAALGGNIKVIVSGGAALQPRLTRVFNAANIPVVQGYGLTETSPVIAVNFLGRGNHKLGSVGRPVEGTEVKIAPDGEILCRGENVMMGYFKRPDATASEIDEDGWFHTGDIGRLDGDGFLFITGRKKELFKTAGGKYVSPPVIENKFKESPFIEYMVVVGENRRFPAALIVPSFTFLREWCVRKEIPWSSNEEMMKHPQVLERYRQETEKFNQLFGQWEQVKRIALIPKEWSVDSGELTPKLDVKRKVVLEKHAKEIEELYEI
>NZ_CP042432.1|WP_132129374.1|1857918_1859616_+|gamma-glutamyltransferase
MRKKLRNCMRYRISYLLLFLLACSGQLAGQGYENGLVVSAHPEASQVGLEILQDGGNAVDASVAVQFALAVVYPSAGNLGGGGFMVFRQADGATASLDFRERAPGKAHRDLYLNEKGEVVPGLSIRGHLAAGVPGTVAGMVEAHEKYGKLSWNEVLRPAIRLALGGFPITGAQAAGLNGHQDLFRKYNPGSAYFLKEKWKAGDTLVQEDLGHTLERIRDKGIAGFYKGRTARLIVREMKEGGGIISRSDLKNYKAVWREPVTGMYKDYKVISMPPPSSGGVALLQMLKMAAPYEPGAFHNAPQVHLLAEIERRVFADRAAYLGDPDFYEVPVEKLLDEDYLRQRMESFEAGKASPSSEITAGKLAAANALQAESMETTHFSIVDKEGNAVALTTTLNGSYGCQVVVDGAGFLLNNEMDDFSAKPGVPNMFGLVGGEANAIEPGKRMLSSMTPTILEKGGRLFMMVGSPGGSTIITTVFQTILNVVDYGMTISEAVDAKRFHHQWLPDQILAERDAFDEAVMQGLEKKGHQLKFTGSIGRCDAILVKDGKYYGGADRRGDDTAAGY
>NZ_CP042432.1|WP_132129376.1|1862038_1863220_+|acetyl-CoA-C-acyltransferase
MTEAFIISAYRSPVGKAPRGQLRFMRPDDLAAEVIRHMLNTLPGLEKERIDDVIVGNATPEAEQGLNIGRMISLLSLDTEKVPGMTVNRYCSSGLETIAIASAKIQAGMADCIIAGGVESMSCIPFGGWRITPNYELAKTHPEYYWGMGLTAETLAREYGVSREDQDAFAYRSHQRTISAIDRGAFKDEIVPIPVRETYVDGEMQRKIRETIVDTDEGARRDTSPEKLAKLKPVFDARGTVTAGNSSQTSDGAAFVMIVSEKMLNELNVRPIARLLSYRVAGVPPRIMGIGPVEAVPAALAAAGKKLQDIDLVELNEAFAAQSLAVMRGLDMDPEKVNVNGGAIALGHPLGCTGAKLSVQLFGELKRRGQRYGLVTMCVGTGQGAAGVFELLS
>NZ_CP042432.1|WP_132129377.1|1863323_1865102_+|acyl-CoA-dehydrogenase
MKQHIPKGGEFLVKETDPGSIFTPEELDEEQRMIAQACNEFLTREVFPRLEELDRQEEGLMESLLKKAGELGLLGVTVPEEYGGSGKGFNTGLLVGEAIGAGHSFAVAFLAHTGIGTLPILYYGTDKQKEKYVSGLAAGEQLACYCLTEPDAGSDARAGKTRAAIVEDGKAYLLNGQKMWITNGGFADLFIVFAKIEDDRELSAFIVEKGFGGITMNPEERKMGIKGSSTRQVFFNDCRVPAENLLSGRGQGFKIAVNILNTGRAKLCAAALGACKEVIAKSEKYANERVQFGAPIASFGAIKHKLAEMRLQTFALESAMYRTGKYVEEVCDEYLREGLPADQARLKSTEQFAIECAILKVCGSECLDYVVDEGVQVFGGMGYSAEGPMERAYRDARINRIFEGTNEINRLLVVDMLLKRAMKGELNLMGPAREVAGELMRLPDMGSAEPDTVLAAEKRLLANLKKVVLMVAGAAVRKFMQHLEKEQELLMNIADMVSFIYLAESALLRAASLSEKQGEENASLYLDMARVYLQEAADKIWLAGKEAVNSFAEGDELKAMQLGLKRFTKAAPFNMKEARRRIFNGSNSPENQ
>NZ_CP042432.1|WP_158640565.1|1865201_1866029_-|CHRD-domain-containing-protein
MKKLTIYGLGAAASLLAITGCEEDNGAGNGDVVKEWTIALSGELEVPSTNRTETGTAHLVLYTNNELEYEIRVDELASGDELTMAHVHTGDPVTSGPVAITIVDGDTRSFSGTTAVGSVALTQENVDLMMGDSIYFNVHSAQAPAGLIRGQIDQEIVFADDIRLESDNEVPPVAVNEASASAHIRLTADNILFYKVKDVEVAVPDPITAGHIHKGAAGTNGEVEIDLAFEQDDVNTTKKLTLNAGQVDLLNNEDTYLNLHSTLAPDGLMRGQIDR
>NZ_CP042432.1|WP_132129379.1|1866200_1868657_+|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MKVLKFGGSSIADPGRVTAVIELVKSRLEAEEKICLVFSAFGGVTDKLIEAGVTAASGNEGYKKGYMELEMRHIQAVKALLPPKEQSMPLTKVKLLLNDLADVLHGIYLLQELSPKILDFVSSFGERLSAYIISEVLRSRGVNAAFSDARELILTDDNFGSARVDFAKTNENITALFDNNSTLQVITGFIAADEKGQTTTIGRSGSDYTAAIVGGAVLAEEIEIWTDVDGMMTADPRRVPEAFPVASMSYQEAIEMSHFGAKVIYPATMQPAMAKNIPIRIKNTFNPSFGGTLISGKTEGGKAMIKGISSINEVALLSLQGSGMMGVVGTSMRLFGALARKGINVILISQASSEYSICIAVDPKLADAARKELESEFRYEMSLEQIESIKVMRELSVVALVGENMKHSPGVAGRMFRALGRNGINVFAISQGSSELNISAVVSRRDEAKALNALHEAFFLSDRKTVPVFLVGTGLVGSTLLAIIRKNMERIGKEQSISIRLAGLSNSRKMLVDERGIDPGDWQARLQEGTPADMDGFVQKMQELNLPNSIFVDCTASDEIVAHYRQVLDGSISVVTPNKRANTGSLEQYRELRRASSKFGVKYLYETNVGAGLPVINTLNDLLNSGDQLLKIEAVLSGTISYIFNTFGEGARFSQVVREAREKGLTEPDPREDLNGMDVARKILILAREVAVDLELDNVSVENLVPENCRNAASVDAFFEELEKADEYFRQKAGEAAREEKKLRYIATLENGKASVALRAVGPDHPFYNLSGSDNIISYTTNRYRERPLVIKGPGAGAEVTAAGVFADLLKIANYSLE

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Crispr_ID: NZ_CP042432_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_9

2372163-2372263

Orphan

Consensus_repeat	Method
TGGCGGCTGTGCGGGGGGGGGCTCACCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_9

>merge|NZ_CP042432|9|2372163-2372263|CRISPRCasFinder
TGGCGGCTGTGCGGGGGGGGGCTCACCTTCGGTGTTGGCTTGCCGCATTAGCTTGCCGCTTCACCTTCGGTGTGGCGGCTGTGCGGGGGGCGGCTCACCTT

>NZ_CP042432|9|9|2372163-2372263|CRISPRCasFinder
TGGCGGCTGTGCGGGGGGGGGCTCACCTT	CGGTGTTGGCTTGCCGCATTAGCTTGCCGCTTCACCTTCGGTG
TGGCGGCTGTGCGGGGGGCGGCTCACCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129541.1\|2381245_2382103_-\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP042432.1\|WP_132129618.1\|2374523_2376620_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|289732
NZ_CP042432.1\|WP_132129535.1\|2372313_2374440_-\|RNA-binding-transcriptional-accessory-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP042432.1\|WP_132129538.1\|2378941_2379391_-\|cold-shock-domain-containing-protein	unknown	unknown	gnl\|CDD\|239905
NZ_CP042432.1\|WP_132129542.1\|2382333_2383893_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|130187
NZ_CP042432.1\|WP_132129531.1\|2368034_2369243_+\|glucuronyl-hydrolase	unknown	unknown	gnl\|CDD\|369381
NZ_CP042432.1\|WP_132129529.1\|2362822_2363044_-\|DUF3098-domain-containing-protein	unknown	unknown	gnl\|CDD\|378629
NZ_CP042432.1\|WP_132129536.1\|2376696_2378190_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374201
NZ_CP042432.1\|WP_132129533.1\|2370104_2371220_+\|DUF4861-family-protein	unknown	unknown	gnl\|CDD\|379779
NZ_CP042432.1\|WP_132129530.1\|2366982_2368014_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP042432.1\|WP_132129534.1\|2371212_2371983_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	unknown	unknown	gnl\|CDD\|188170
NZ_CP042432.1\|WP_132129537.1\|2378252_2378891_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129532.1\|2369258_2370098_+\|5-dehydro-4-deoxy-D-glucuronate-isomerase	unknown	unknown	gnl\|CDD\|179169
NZ_CP042432.1\|WP_132129617.1\|2364028_2366851_+\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|178177
NZ_CP042432.1\|WP_132129539.1\|2379452_2380538_-\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349906
NZ_CP042432.1\|WP_132129616.1\|2363043_2363925_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|225088
NZ_CP042432.1\|WP_132129528.1\|2362018_2362813_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|376891
NZ_CP042432.1\|WP_132129527.1\|2361260_2361989_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|211339
NZ_CP042432.1\|WP_132129540.1\|2380555_2381104_-\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
NZ_CP042432.1\|WP_132129543.1\|2383970_2384651_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129541.1\|2381245_2382103_-\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	4.17505e-32
NZ_CP042432.1\|WP_132129618.1\|2374523_2376620_+\|hypothetical-protein	gnl\|CDD\|289732	pfam12981, DUF3865, Domain of Unknown Function with PDB structure (DUF3865). Family based of Structure 3B5P encoded by ZP_00108531 from nitrogen-fixing cyanobacterium Nostoc punctiforme pcc 73102 is a CADD-like protein of unknown function. Superposition between protein structures encoded by CT610 from Chlamydia trachomatis (Structure 1rwc), pyrroloquinolinquinone synthase C (PqqC, Structure 1otv) and ZP_00108531 revealed that putative active sites in CT610 and ZP_00108531 are identical.	0.00877658
NZ_CP042432.1\|WP_132129535.1\|2372313_2374440_-\|RNA-binding-transcriptional-accessory-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP042432.1\|WP_132129538.1\|2378941_2379391_-\|cold-shock-domain-containing-protein	gnl\|CDD\|239905	cd04458, CSP_CDS, Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. CSP expression is up-regulated by an abrupt drop in growth temperature. CSP's are also expressed under normal condition at lower level. The function of cold-shock proteins is not fully understood. They preferentially bind poly-pyrimidine region of single-stranded RNA and DNA. CSP's are thought to bind mRNA and regulate ribosomal translation, mRNA degradation, and the rate of transcription termination. The human Y-box protein, which contains a CSD, regulates transcription and translation of genes that contain the Y-box sequence in their promoters. This specific ssDNA-binding properties of CSD are required for the binding of Y-box protein to the promoter's Y-box sequence, thereby regulating transcription.	1.1603e-16
NZ_CP042432.1\|WP_132129542.1\|2382333_2383893_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP042432.1\|WP_132129531.1\|2368034_2369243_+\|glucuronyl-hydrolase	gnl\|CDD\|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	2.02626e-16
NZ_CP042432.1\|WP_132129529.1\|2362822_2363044_-\|DUF3098-domain-containing-protein	gnl\|CDD\|378629	pfam11297, DUF3098, Protein of unknown function (DUF3098). This bacterial family of proteins has no known function.	7.91665e-18
NZ_CP042432.1\|WP_132129536.1\|2376696_2378190_+\|hypothetical-protein	gnl\|CDD\|374201	pfam15892, BNR_4, BNR repeat-containing family member. BNR_4 is a family which carries the unique sequence motif SxDxGxTW which is so characteristic of the repeats of the BNR family, pfam02012. It is unclear whether or not this unit is repeated throughout the sequences of this family, but if it is then the family is likely to be bacterial neuraminidase.	1.61388e-17
NZ_CP042432.1\|WP_132129533.1\|2370104_2371220_+\|DUF4861-family-protein	gnl\|CDD\|379779	pfam16153, DUF4861, Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding.	1.24573e-85
NZ_CP042432.1\|WP_132129530.1\|2366982_2368014_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.2427e-88
NZ_CP042432.1\|WP_132129534.1\|2371212_2371983_+\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	gnl\|CDD\|188170	TIGR01832, 2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase, 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	3.04599e-111
NZ_CP042432.1\|WP_132129532.1\|2369258_2370098_+\|5-dehydro-4-deoxy-D-glucuronate-isomerase	gnl\|CDD\|179169	PRK00924, PRK00924, 5-keto-4-deoxyuronate isomerase; Provisional.	0
NZ_CP042432.1\|WP_132129617.1\|2364028_2366851_+\|leucine--tRNA-ligase	gnl\|CDD\|178177	PLN02563, PLN02563, aminoacyl-tRNA ligase.	0
NZ_CP042432.1\|WP_132129539.1\|2379452_2380538_-\|M42-family-metallopeptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.28476e-131
NZ_CP042432.1\|WP_132129616.1\|2363043_2363925_-\|FtsX-like-permease-family-protein	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	2.10038e-45
NZ_CP042432.1\|WP_132129528.1\|2362018_2362813_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|376891	pfam02673, BacA, Bacitracin resistance protein BacA. Bacitracin resistance protein (BacA) is a putative undecaprenol kinase. BacA confers resistance to bacitracin, probably by phosphorylation of undecaprenol. More recent studies show that BacA has undecaprenyl pyrophosphate phosphatase activity. Undecaprenyl phosphate is a key lipid intermediate involved in the synthesis of various bacterial cell wall polymers. Bacitracin, a mixture of related cyclic polypeptide antibiotics, is used to treat surface tissue infections. Its primary mode of action is the inhibition of bacterial cell wall synthesis through sequestration of the essential carrier lipid undecaprenyl pyrophosphate, C55-PP, resulting in the loss of cell integrity and lysis. The characteristic phosphatase sequence-motif in this family is likely to be the PGxSRSGG, compared with the PSGH of the PAP family of phosphatases.	5.81577e-87
NZ_CP042432.1\|WP_132129527.1\|2361260_2361989_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|211339	cd02573, PseudoU_synth_EcTruB, Pseudouridine synthase, Escherichia coli TruB like. This group consists of bacterial pseudouridine synthases similar to E. coli TruB and Mycobacterium tuberculosis TruB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). E. coli TruB and M. tuberculosis TruB make psi55 in the T loop of tRNAs. Psi55 is nearly universally conserved. E. coli TruB is not inhibited by RNA containing 5-fluorouridine.	1.35583e-84
NZ_CP042432.1\|WP_132129540.1\|2380555_2381104_-\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	7.06522e-94
NZ_CP042432.1\|WP_132129543.1\|2383970_2384651_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.38783e-85

>NZ_CP042432.1|WP_132129534.1|2371212_2371983_+|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD
MNSITSFSLDGKVALVTGCKRGIGKGMAEALAEAGADIIGVSASLEPEGSEVEKAVQAAGRNFYAYQCDFAKRDALYAFVEQVKNDHPRIDILVNNAGTILRKPAAEHPDEYWDEVIAINQTAQFVLTREIGKGMLERGSGKVIFTASLLTFQGGINVPGYAASKGAVGQLTKAFANEWASKGVNVNAIAPGYIATDNTAALRADADRSRSILERIPAGRWGNPEDFKGPAVFLASEASAYVHGAIIPVDGGWLSR
>NZ_CP042432.1|WP_132129533.1|2370104_2371220_+|DUF4861-family-protein
MKRIHIIFGGVLAAGLWTCSGPDTGVLTTVSLQNPGEKRTGKVMEIPYGEIASKLEGVREFRVVEAVSGKEVPYQVEYRGQEEPLNLLVQVDLPEKEALELELRKGTPAPFASKTFARYVPERMDDFTWENDKVAFRMYGKALEGTSGDAHGIDVWVKRTPELVIDKWYKTGDYHADHGEGLDYYSVGMTLGAGDIVPYLNDSLWFPKHYRKHQVLDNGPLRSTFRLDYEQWNAAGIPVTVSKLISLDAGSQLNRVEVLFETAEASELPVAIGIVQRQEPGVHLMDKEAGIMGYWEPQHGEDGITGVGVVIDAPVKDISIQGEHLLGIVNIKPGAPLVYYTGAAWNKAGDISSAEDWFAYLEDYQENSKYE
>NZ_CP042432.1|WP_132129532.1|2369258_2370098_+|5-dehydro-4-deoxy-D-glucuronate-isomerase
MVKDETRYACSPHEVKEMDTARLRENFLIEVLFEPDATRWTCSHYDRYMAGGIHPVKSALKLEPLDQLKAGYFLERRELGIINVGGAGKVQVDGETVELGFKEALYIGRGKREVIFSSNDPAAPARFYLNSAPAHKEFPMKKVSQADAEVVILGSLETANHRTINKLLVNSKVETCQLQMGMTELKPGSVWNTMPAHTHDRRMEVYFYFEVPEGQSVCHFMGQPQETRHIWMQNQQAVISPPWSVHAGAGTSNYSFIWGMAGENLDYDDMDKCAINDLR
>NZ_CP042432.1|WP_132129531.1|2368034_2369243_+|glucuronyl-hydrolase
MNRSVFYPLLLLILAGTLLSACRVKQAGKTGLDAQFVDENLQSAIAQYKVMMEGLPDDRLPKSYTAAQDELVTSGSGSWTSGFYPGTLLLLYEFSKDESLLEEAKKKLAIIEKEKNNRGTHDLGFMLYCSFGNALRLTGDTAYKKVLLTGAGSLSSRFDPEVGCIKSWDHNGDKWKFPVIIDNMMNLEFLSWASRESGNPEYLDIALNHANTTIENHFRPDNSSWHVVDYDPETGEVRGKQTHQGAADESAWARGQAWGLYGYTMMYRETEKKPYLDQAKKIAAFMLKHPNLPEDGIPYWDFDAPGIPDTYRDASAGAIMASALLELNHITGDREYLAAAEKMIRSLSGEKYKAPVGENGGFILLHSVGHLPGNSEVDVPLSYADYYYIEALMRYKKWFLEK
>NZ_CP042432.1|WP_132129530.1|2366982_2368014_+|LacI-family-transcriptional-regulator
MKSNDKLESTIVDIARELRISPATVSRALNDHPKISHRTKERVREKALEMGYRRNKLASGLRNNRTYTIGMIVPRISMFFHAEVITIVQNLLHRQGYNLIICQSNDSRELEVDLASALYSSRVDGVLVASTLYTTDYSHFDVFVQKGIPLVFYDRVPVDFYPAQMVKGDEYRGGYLAGEHLAEAGCKNIAAIFGLLGCCLYKGRYAGFKAALKAHKLALKKDQVFFHELTHENALATLDKLFSSKPYPDGLFTANDTSALAVLEFARENKIRIPGDLKLIGYSNDPRAASVTPAITTVDQFPGEVARQLVAALNKLLDNRSKKIMEKPEALVTPVALIKRMTT
>NZ_CP042432.1|WP_132129617.1|2364028_2366851_+|leucine--tRNA-ligase
MDYNFRSIEKKWQGFWAENQTFKAETGGNKPKYYVLDMFPYPSGAGLHVGHPLGYIASDILARFKRLKGFNVLHPMGYDAFGLPAEQYAIQTGQHPALTTDNNIRTFRRQLDNIGLSFDWSREVRTSDPDFYKWTQWIFIRFFHSWYNKKTGKAEAIDTLINEFEQEGNARVEAASGEVAVFTAPEWKAYSEKEKEAVLQHYRLAYQADAYVNWCPRLGTVLANDEVQDGLSVRGGYPVERKLMRQWFMRITAYAERLLNDLEEIDWPEPIKEMQRNWIGRSEGAMVRFELAPGSVANGAAAEPGAGQMQERANPNIEVFTTRPDTIFGCTFLVLAPEHELVDQITSAEQLGEVRAYVQTAKNRSERDRMADVKTVSGAFTGAYALHPFTGEKIPVWIADYVLAGYGTGAVMAVPSGDNRDFRFARHFNLPIPAIAKDRDISEEAYEGKDAIMINSGFLNGMTMAEAIGKAIEAIEKKGIGKGKIQYRLRDAAFSRQRYWGEPFPLYYKDGIPHTLGEDQLPLVLPEVDKYLPTESGEPPLARAKDWQTAEGYPLETNTMPGWAGSSWYYLRYMDAENAKEFAGHEAVDYWRQVDLYLGGPEHATGHLLYVRFWTKFLYDIGRIPVKEPAKKLINQGMIQGRSNFVYRVKGSNTFVSYGLKDQYDTTSLHVDVNIVQNDILDTEKFKAFNPDYAHAEFILEEGKYICGFEVEKMSKSRFNVVNPDIIIEQYGADTLRMYEMFLGPLEQSKPWNTNGIEGVFKFLRKFWKLFFDDSWNFRVSEEKATAGELKALHKLIKKVEDDVERFSFNTSVSNFMICVNELTALACHKRAILQDLVIVLASYAPHICEELWERLGNAPGSLSYASYPRFNEAYLKEDSFEYPVSVNGKVRTKMNFALDMDQAGMEKEILSAEAVQRYLEGKPPKKIIIVKGRIVNVVV
>NZ_CP042432.1|WP_132129616.1|2363043_2363925_-|FtsX-like-permease-family-protein
MQEQVESRPGSRKKKGLSVSTVISISLVLLMVGVLGMIILAGKNLSNYVKENIYLSVIFQKTAAEKQVLQLQKEIAELPGVRATEYISKEKAAESLQKELGEDFMTFLGYNPLPASMDVHVEAEYAATDSIAGLEKQIREEKLVEDVVYQKSLVESVNSNIRTISLVLLGVCALLAIIAIALINNTIRLAIYSQRFIIKSMQLVGATKNFIKRPFLWLGILHGLIGALVAIGLLVALVYFAEQQLPELKAVLNYRELGTVFIIMFICGIIISLISTYFAVSKYLRKRMPQLYH
>NZ_CP042432.1|WP_132129529.1|2362822_2363044_-|DUF3098-domain-containing-protein
MSKKTTPPAESQTTGLLFNRKNYRLMLIGLAVTILGFALMYGKTDIYDFRKTVLAPIVVLAGFAVQFFAILKK
>NZ_CP042432.1|WP_132129528.1|2362018_2362813_-|undecaprenyl-diphosphate-phosphatase
MTIFQAIILAIIEGLTEFLPVSSTGHMIIGSSLMGIATLEFTKVFTVAIQFGTILSVVALYWKRFFQSFEFYGKLLIGVIPAAVIGLLLSDWIDLMLENVVIVAVMLLLGGIVFLLLDKWFERSENNPDKTLTYGNAFRIGLFQCIAMIPGVSRSASTIIGGLVQKLNKKQAAEFSFFLAVPTMFAATCKKLYDFHELGFEFTGDYLLLLLIGNVVGFVVAILAIKSFISYLTRHGFKLFGYYRIAVGLLILGLYLAGVDLQIV
>NZ_CP042432.1|WP_132129527.1|2361260_2361989_-|tRNA-pseudouridine(55)-synthase-TruB
MNLGKKASDFDFEEGEILLFNKPLHWTSFDVVNKVRQVLKKYTGQKKLKVGHAGTLDPLATGLLLICSGKMTKSIDKFQGQEKEYTGTMLLGATTPSFDLETAIDRRFDISHLKEGELHAAAQTLTGEIEQVAPAFSALKIEGERAYEKARRGEKPVIRARKVHIPVFELTAIRRPEVDFRVICSKGTYIRSLMHDFGQALNNGACLTVLTRTRIGDFKLSSAWEVNDFVQMIKAEGNESLS
>NZ_CP042432.1|WP_132129535.1|2372313_2374440_-|RNA-binding-transcriptional-accessory-protein
MKNQYYGLIAENLSISEKQLLSVARLLEEGGTIPFIARYRKEATGNLDEVKLAAIREKLAYFRDLEKRKETVLKTIDEQGKLSPALKEQIEKCTDQHQLEDLYLPYKPKRKTRAIAALEKGLGPLADIIYLQATVNLDAKAGEFLGETVKTTEEALQGARDIIAERVSEDAGARTAIRNLFSREALLTSAVIKSKAEEAAKYRDYFNFSEPLKQCPSHRVLAIRRGEKEGFLSMDIAVEADKAISRLKKMFVRSANACTPHLEAAVEDAYKRLLKPSIETEFRLLHKNKADEEAIAVFSENLRQLLLAAPLGPRRILAIDPGYRTGCKVVLLDEQGSLLENTTVFPHPPQNERERTIKQLKDLVSRHRTEAIAIGNGTAGKETEKLVRSIDFGTNPRIFLVNESGASIYSASEAAREEFPDKDVTVRGAVSIGRRLMDPLSELVKIDPKSIGVGQYQHDVNQTRLKESLDTVVESCVNLVGVDLNTATKHLLNYVSGLGPKLAANIVQYRQQKGAFTSRKELLKVPLLGDKAFEQCAGFLRILNAAHPLDESAVHPESYPVVEKMAADLGCTVAELITKKELRKKIELRKYLKEGAGELTLKDILKELEKPGRDPREELQDFSFAEGIDSIEDLRPGMVLPGVVTNITKFGAFVDIGIKQDGLVHISHLANRFIKDPAEAVKLQQIVRVKVLEIDQARSRVQLSIKEA
>NZ_CP042432.1|WP_132129618.1|2374523_2376620_+|hypothetical-protein
MTYLLLPFLLIANLVKAQVPVNLSGWEKKSGVEVNQDGKLLNITWMAGESPNGNDRTGGISISLEKEAPLFHRIMLNEGGDSHEIASAMDPVFLLTVGKRNLDVERNDTKLGWTIFFDNPSASPFETYPVVLDKEDVQVVSEGAQTRIIVGGAEAGPFTGAIEITLFRGSPLVNMAAVMQTEKDSLAIIYDAGLVSKQQPWEKLFWSDPQDYLQDRGAVSGEEAQTLAVKYRTIIGQGEEGSLAVFPPPHQYFYPLDNCYNFNHTWFGTGYRDLVPGYGIGIRHELLGDRRWVPWFNAPPHTKQRLNFFCLLSAEKDGKVLEEVKQFTHEDKYLPVPGYYTMSSHFHTEHTDDVLTHKPLPEIPGFVKAFRNTGVNIVHLGEFHGPGSPRGPEIERFSELQLLFAECERLSSGNFLLLPGEEPNNFFGGHWMNIFPNPVYWVMSRDEGEAFTEQHPVYGKIYRIGDTEDMMRLLEEEKGLAWTAHPRIKGSAGYPDKYKDEAFYRSDRFLGGAWKAMPADLSQDRLGTRVLDLLDDMANWGQKKQVIAEADLFKVEPEYELYGHMNVNYLQMEELPEFEDGWQPVLDAMQQGKFFSTTGEILLPSVTLNGKGPGETAAVNGKATLTATVSWTFPLAFAEIISGDGKEVYRERISLKDTEAFGKKTFEFPVNLENRKWVRLEVWDAAVNGAFTPCIWLE
>NZ_CP042432.1|WP_132129536.1|2376696_2378190_+|hypothetical-protein
MREFRCFFVCVFLFISNTAFSQTEPDSRTGAEAEVYGNARLINKQDDGYRGIWYHIGGAGQRGPVTNKYRYKYSGGLGTYPANHYPFSVYAGEVNKTFFCYGGTDKSGKTLYHMVSYFDHASGKVPRPTIVLDKATNDAHDNPVMQIDREGYIWIFSTSHGTGRPSFIHRSSRPYDISEFERVAATKLVNGKKVPLDNFSYLQVYYSDESGFAALFTHYEKRGGRVIAWMTSKDGVEWSAWKDLSLLDEGQYQTSGSRGELIGTSFNYHPAREVRGGLDFRTNLYYLQTTDFGKTWQTVDGSPVKLPLTEVNNSALVYNYDSEKRNVYICDLNFDKKKRPVILYLTSKGPMPGPEDGPRNWYTACWTGDEWEIRPFTSSGNNYDMGSIYTEKGKWIVVAPTEPGPQEYNTGGEMVLWKSANKGKSWKKVKQLTRDSEFNHTYARRPVHVHPDFYAFWADGHGRQPSASRLYFCDKKGNVFKLPEVMDKPLMKPIPVR
>NZ_CP042432.1|WP_132129537.1|2378252_2378891_+|hypothetical-protein
MTQILRYICLPAVFLAVTACKKDFLWNLEGMEPVSADWMFRDLKLPETYDYIELRMSYGPWEAMYHVQDSLGLKCDETIPDCFTRFDTLRTYRHSFHQGCLPGYCDHYLVTRQGNTIRTWVGLDELSSFLGPVDDSGDALLWVYANGYYFEAGNSRNSGVKRLNDDIFYMIALRMVKDCMPVQTDRFLLEVHRSGEIKILAQALHHQSGGCI
>NZ_CP042432.1|WP_132129538.1|2378941_2379391_-|cold-shock-domain-containing-protein
MGRSQESFSKKEKEKKRLKKKKEKEEKREERQANSKKGKGLDEMMAYVDEYGNILDAPPDPSQKETINSEDIEVSVSKLEKAEMNPIRKGVVTFFNDSRGYGFIRDLETQESIFVHVNETDFPIKENDRVTFEIAKGPKGANAVSVRLT
>NZ_CP042432.1|WP_132129539.1|2379452_2380538_-|M42-family-metallopeptidase
MAILNKQSLSFLEKYINNPSPVSYESSGQKLWLDYLKPYVDEHYVDNYGTAVGIINPGAEYKVVIEAHADEISWYVNYITGEGIIYVCRNGGSDHQIAPSKRVHVHTDKGIIPGVFGWPAIHTRHKENGKEEAPSLKNIFVDVGCTSKEEVEELGIHVGCVITFSDEFTTLNNRYYVGRALDNRAGGFMIAEVARLLKENKKKLPFGLYVVNAVQEEIGLRGAEMIAHHIRPDVAIVTDVTHDTQTPMIDKKVQGDVFCGKGPVVSYAPAVQTNLNRLIVETAEKKKIPFQRQASSRSTGTDTDAFAYSNAGVVSALVSLPLRYMHTTVEMVHKEDVDNCIRLMYESLLAIRAGQDFRYLK
>NZ_CP042432.1|WP_132129540.1|2380555_2381104_-|ATP-dependent-Clp-protease-proteolytic-subunit
MEKFKSLKDRIDYSLLEERKVFLWGVVNDESAKHVIERLIYLESIAPGKEISLIINSPGGYVTSGFAIHDTMKNIKSPVSTICMGLAASMGSILLSAGEKGKRFIYPYAKVMIHQPSGGAQGPTSDIEIQAREILKTKELGAKILAENCGQSVEKIMKDFNRDYWMDADESVAYGVVDDILK
>NZ_CP042432.1|WP_132129541.1|2381245_2382103_-|DUF1080-domain-containing-protein
MTILKPFKLQLACSLLLSFLLTSCTAQEQEPEWIQLFNGKDLNDWVVKIRGYELNENFGNTFRVEDSLMKVSYEAYEDFKQQYGHIYYKEPFSAYLLSVEYRFTGEQAPGGEGWAFRNSGAMLHCQDPATIHKGQDFPISIEAQFLGGDGEHERSTANLCTPGTNVVMENELFTPHCVNSSSKTYHGDQWVQVDLLVLADSVIKHIVEGDTVLEYTHPQIGGGSVSDYDPAVKQDGKALTGGYIALQSESHPIEFRKVALVNLEPYMDDPAKLRKVLDKLKNRKD
>NZ_CP042432.1|WP_132129542.1|2382333_2383893_-|acyl-CoA-carboxylase-subunit-beta
MSEDKPKTGEEILEEKREKALLGGGNARIESQHRKGKLTARERLHFLLDEGSFRETGMLVTHRTAGFGMEQEKYPGDGVVTGYGTVQGRLVYVYSQDFTVFGGSLSETHAEKICKVMDLAMKTGAPLIGLNDSGGARIQEGVVSLGGYADIFYRNTLASGVIPQLSAIMGPCAGGAVYSPAITDFILMVENTSYMFVTGPNVVKTVTHEEVTSEELGGADTHAVKSGVTHFACKNEIECINTIKGLLSYMPQNCEEQPPFLPFEGDPLAPVPQLDKLIPANANQPYDMCELVSLLADEGSFLEVHKDFAGNMITGFARLAGRSIGVVANQPAVLAGVLDIQASRKAARFVRFCDSFNIPLLVLVDVPGFLPGTDQEWNGIISNGAKLLYAFSEATVPRITVITRKAYGGAYCVMNSKHIGADMNYAWPNAEIAVMGARGAAEIIFKKEIAAAADPDAKWKEKEEQYSTIFANPYRAAERGFIDEVIAPRETRARLISAFEMLAQKVVNAPRKKHGNIPL
>NZ_CP042432.1|WP_132129543.1|2383970_2384651_+|response-regulator-transcription-factor
MKILLVEDEPGVASFIKKGLEEQQHEVQLAYDGETALQLLEGTAWDMIILDVILPHLSGLDVCRIIREKLHLATPVLMLTALGSTDNIVKGLETGADDYLVKPFKFKELLARIKALVRRHDGETVPSRQLVFADVELDLHKKTVVRAGRPIVLTSREFLLLEYFMRNPNRVISRTEILENVWEINFDLGSNVIDVYISYLRNKMDRGFTRKLIHTKVGMGYIMQSS

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Crispr_ID: NZ_CP042432_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_10

2403424-2403554

Orphan

Consensus_repeat	Method
GGAACAATCCTGCCGGCGTTTGCCGCTGCGGCCCGTAAGCGGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_10

>merge|NZ_CP042432|10|2403424-2403554|CRISPRCasFinder
GGAACAATCCTGCCGGCGTTTGCCGCTGCGGCCCGTAAGCGGCTTTCTGCGTTCCCCTTCCTTATATCCCTGCTCCAGCCATCCCTGGAACAATCCTGCCGGCGTTTGCCGCTGCGGCCCGCAAGCGGCTT

>NZ_CP042432|10|10|2403424-2403554|CRISPRCasFinder
GGAACAATCCTGCCGGCGTTTGCCGCTGCGGCCCGTAAGCGGCTT	TCTGCGTTCCCCTTCCTTATATCCCTGCTCCAGCCATCCCT
GGAACAATCCTGCCGGCGTTTGCCGCTGCGGCCCGCAAGCGGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129561.1\|2407917_2408631_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129553.1\|2397259_2400400_+\|glycoside-hydrolase-family-92-protein	unknown	unknown	gnl\|CDD\|377950
NZ_CP042432.1\|WP_132129556.1\|2402707_2403403_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP042432.1\|WP_132129562.1\|2408728_2409202_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|376840
NZ_CP042432.1\|WP_158640597.1\|2411765_2412143_-\|DUF2752-domain-containing-protein	unknown	unknown	gnl\|CDD\|378499
NZ_CP042432.1\|WP_147698301.1\|2403619_2406448_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379720
NZ_CP042432.1\|WP_132129550.1\|2392486_2393851_-\|DUF839-domain-containing-protein	unknown	unknown	gnl\|CDD\|253386
NZ_CP042432.1\|WP_158640596.1\|2393865_2394006_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129551.1\|2394051_2395125_+\|tetraacyldisaccharide-4'-kinase	unknown	unknown	gnl\|CDD\|376853
NZ_CP042432.1\|WP_132129552.1\|2395146_2397099_+\|putative-porin	unknown	unknown	gnl\|CDD\|379481
NZ_CP042432.1\|WP_132129563.1\|2409224_2411486_-\|aconitate-hydratase	unknown	unknown	gnl\|CDD\|273561
NZ_CP042432.1\|WP_132129560.1\|2407469_2407946_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|241075
NZ_CP042432.1\|WP_132129566.1\|2412475_2413138_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP042432.1\|WP_132129559.1\|2407041_2407473_+\|DUF5606-domain-containg-protein	unknown	unknown	gnl\|CDD\|375774
NZ_CP042432.1\|WP_132129558.1\|2406601_2407045_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_CP042432.1\|WP_132129549.1\|2391568_2392042_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223976
NZ_CP042432.1\|WP_132129565.1\|2412127_2412439_-\|CD225/dispanin-family-protein	unknown	unknown	gnl\|CDD\|377375
NZ_CP042432.1\|WP_132129548.1\|2389780_2391412_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143441
NZ_CP042432.1\|WP_132129555.1\|2401758_2402721_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129554.1\|2400463_2401723_-\|asparagine-synthetase-B	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129553.1\|2397259_2400400_+\|glycoside-hydrolase-family-92-protein	gnl\|CDD\|377950	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation.	0
NZ_CP042432.1\|WP_132129562.1\|2408728_2409202_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|376840	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase. This family of proteins are predicted to be SPOUT methyltransferases.	1.27333e-76
NZ_CP042432.1\|WP_158640597.1\|2411765_2412143_-\|DUF2752-domain-containing-protein	gnl\|CDD\|378499	pfam10825, DUF2752, Protein of unknown function (DUF2752). This family is conserved in bacteria. Many members are annotated as being putative membrane proteins.	3.75416e-16
NZ_CP042432.1\|WP_147698301.1\|2403619_2406448_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	8.55795e-35
NZ_CP042432.1\|WP_132129550.1\|2392486_2393851_-\|DUF839-domain-containing-protein	gnl\|CDD\|253386	pfam05787, DUF839, Bacterial protein of unknown function (DUF839). This family consists of several bacterial proteins of unknown function that contain a predicted beta-propeller repeats.	1.94437e-83
NZ_CP042432.1\|WP_132129552.1\|2395146_2397099_+\|putative-porin	gnl\|CDD\|379481	pfam14121, Porin_10, Putative porin. This family of membrane bet-barrel proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 655 and 722 amino acids in length. SRI_1264 is identified by Gene3D as a membrane bound beta-barrel. These sequences are putative porins.	1.24726e-135
NZ_CP042432.1\|WP_132129559.1\|2407041_2407473_+\|DUF5606-domain-containg-protein	gnl\|CDD\|375774	pfam18347, DUF5606, Domain of unknown function (DUF5606). This is a domain of unknown function found at the N-terminal region of bacterial proteins.	1.22865e-14
NZ_CP042432.1\|WP_132129565.1\|2412127_2412439_-\|CD225/dispanin-family-protein	gnl\|CDD\|377375	pfam04505, CD225, Interferon-induced transmembrane protein. This family includes the human leukocyte antigen CD225, which is an interferon inducible transmembrane protein, and is associated with interferon induced cell growth suppression.	1.11577e-19
NZ_CP042432.1\|WP_132129563.1\|2409224_2411486_-\|aconitate-hydratase	gnl\|CDD\|273561	TIGR01340, Homocitrate_dehydratase_mitochondrial, aconitate hydratase, mitochondrial. This model represents mitochondrial forms of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. [Energy metabolism, TCA cycle].	0
NZ_CP042432.1\|WP_132129560.1\|2407469_2407946_+\|hypothetical-protein	gnl\|CDD\|241075	cd12631, RRM1_CELF1_2_Bruno, RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins. This subgroup corresponds to the RRM1 of CELF-1, CELF-2 and Bruno protein. CELF-1 (also termed BRUNOL-2, or CUG-BP1, or EDEN-BP) and CELF-2 (also termed BRUNOL-3, or ETR-3, or CUG-BP2, or NAPOR) belong to the CUGBP1 and ETR-3-like factors (CELF) or BRUNOL (Bruno-like) family of RNA-binding proteins that have been implicated in regulation of pre-mRNA splicing, and control of mRNA translation and deadenylation. CELF-1 is strongly expressed in all adult and fetal tissues tested. The human CELF-1 is a nuclear and cytoplasmic RNA-binding protein that regulates multiple aspects of nuclear and cytoplasmic mRNA processing, with implications for onset of type 1 myotonic dystrophy (DM1), a neuromuscular disease associated with an unstable CUG triplet expansion in the 3'-UTR (3'-untranslated region) of the DMPK (myotonic dystrophy protein kinase) gene; it preferentially targets UGU-rich mRNA elements. It has been shown to bind to a Bruno response element, a cis-element involved in translational control of oskar mRNA in Drosophila, and share sequence similarity to Bruno, the Drosophila protein that mediates this process. The Xenopus homolog embryo deadenylation element-binding protein (EDEN-BP) mediates sequence-specific deadenylation of Eg5 mRNA. It binds specifically to the EDEN motif in the 3'-untranslated regions of maternal mRNAs and targets these mRNAs for deadenylation and translational repression. CELF-1 contain three highly conserved RNA recognition motifs (RRMs), also known as RBDs (RNA binding domains) or RNPs (ribonucleoprotein domains): two consecutive RRMs (RRM1 and RRM2) situated in the N-terminal region followed by a linker region and the third RRM (RRM3) close to the C-terminus of the protein. The two N-terminal RRMs of EDEN-BP are necessary for the interaction with EDEN as well as a part of the linker region (between RRM2 and RRM3). Oligomerization of EDEN-BP is required for specific mRNA deadenylation and binding. CELF-2 is expressed in all tissues at some level, but highest in brain, heart, and thymus. It has been implicated in the regulation of nuclear and cytoplasmic RNA processing events, including alternative splicing, RNA editing, stability and translation. CELF-2 shares high sequence identity with CELF-1, but shows different binding specificity; it binds preferentially to sequences with UG repeats and UGUU motifs. It has been shown to bind to a Bruno response element, a cis-element involved in translational control of oskar mRNA in Drosophila, and share sequence similarity to Bruno, the Drosophila protein that mediates this process. It also binds to the 3'-UTR of cyclooxygenase-2 messages, affecting both translation and mRNA stability, and binds to apoB mRNA, regulating its C to U editing. CELF-2 also contains three highly conserved RRMs. It binds to RNA via the first two RRMs, which are also important for localization in the cytoplasm. The splicing activation or repression activity of CELF-2 on some specific substrates is mediated by RRM1/RRM2. Both, RRM1 and RRM2 of CELF-2, can activate cardiac troponin T (cTNT) exon 5 inclusion. In addition, CELF-2 possesses a typical arginine and lysine-rich nuclear localization signal (NLS) in the C-terminus, within RRM3. This subgroup also includes Drosophila melanogaster Bruno protein, which plays a central role in regulation of Oskar (Osk) expression in flies. It mediates repression by binding to regulatory Bruno response elements (BREs) in the Osk mRNA 3' UTR. The full-length Bruno protein contains three RRMs, two located in the N-terminal half of the protein and the third near the C-terminus, separated by a linker region. .	0.00138449
NZ_CP042432.1\|WP_132129566.1\|2412475_2413138_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	4.32627e-52
NZ_CP042432.1\|WP_132129551.1\|2394051_2395125_+\|tetraacyldisaccharide-4'-kinase	gnl\|CDD\|376853	pfam02606, LpxK, Tetraacyldisaccharide-1-P 4'-kinase. This family consists of tetraacyldisaccharide-1-P 4'-kinase also known as Lipid-A 4'-kinase or Lipid A biosynthesis protein LpxK, EC:2.7.1.130. This enzyme catalyzes the reaction: ATP + 2,3-bis(3-hydroxytetradecanoyl)-D -glucosaminyl-(beta-D-1,6)-2,3-bis(3-hydroxytetradecanoyl)-D-glu cosam inyl beta-phosphate <=> ADP + 2,3,2',3'-tetrakis(3-hydroxytetradecanoyl)-D- glucosaminyl-1,6-beta-D-glucosamine 1,4'-bisphosphate. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS). The family contains a P-loop motif at the N-terminus.	2.00974e-91
NZ_CP042432.1\|WP_132129558.1\|2406601_2407045_+\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	1.61829e-56
NZ_CP042432.1\|WP_132129556.1\|2402707_2403403_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.38076e-43
NZ_CP042432.1\|WP_132129548.1\|2389780_2391412_-\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|143441	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.	0
NZ_CP042432.1\|WP_132129549.1\|2391568_2392042_+\|peptidylprolyl-isomerase	gnl\|CDD\|223976	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones].	1.41731e-49

>NZ_CP042432.1|WP_132129556.1|2402707_2403403_+|ABC-transporter-ATP-binding-protein
MLKIENLSLSYDGKKTILEGLCLDAKEGSLHGLVGGNGSGKTSLFNCLYGTVVFQQGTILLNGSPLKRDAIAYLETENFFYPKITGKEYLNLFAHVNPGFDFRGWNELFVLPLNRLTDTYSSGMKKKLAFLGIMSFDRPVMILDEPFNGVDMETVQIMKVILDKLRHAGKIILITSHILESLTSICDSISYLSGKNIVFTYNRSDYDKIQEAVFGLDNAGTKARVARLLQS
>NZ_CP042432.1|WP_132129555.1|2401758_2402721_+|hypothetical-protein
MEGRIRSFFLSLLLIRFLQAARFLKELGIIRAVILISCCFYLVMPAGKVYFTDTVAGGAFAALTLLLIHISRKDRRFLTTVFGRRGYRAMAIEYALISLPCCCYYLYSGNIASLAVLLPAIFGVPFIQFRLKRAGGAGAMAGLFPARAFELRSCFRENWFLFLLILPAGLIFSRQPAIPALAMLSITLIFTFSTSMNEPRVMLETFRSGSELLRYKVSTYLNVLLVCLSPLLLAFLLFHYQYWYLLAALLLACCMILLLGICLKYAFYVPETDMLANKILVGSSVACFVIVYLAPLPFIMLPFYYRKARKNLDNYFYAED
>NZ_CP042432.1|WP_132129554.1|2400463_2401723_-|asparagine-synthetase-B
MKSFLVFCVSLLLLVKTAVASSILIYMDETQKNHLKAYGIAYWTLGKEQPVDWLLNYRGGSFLTAYSQQLENECKIRGVSYEVVPDAKVSAILGEIADPQSNTDLVRLEKAPKMAVYSPKNKQPWDDAVTLVLTYAEIPYDIIYDKDVLEGKLPAYDWLHLHHEDFTGQYGRFWANFRNAPWYQSDVRSNEELAAEMGYDKVSQLKLAVAKNIRDFTAGGGFLFAMCSGTDSFDIALAAEGVDICEAMFDGDPADPAAQQKLDFSRTFAFLDFTLDANPYNYEFANIDVSPMRPVNEQNDVFVLFDFSAKWDVVPSMLTQCHQKVIRGFMGQTTAFRKEIIKPDVLIMGENKALNEARYIHGEYGKGTWTFYSGHDPEDYQHMVGDPPTDLNLHPNSPGYRLILNNVLFPAARKKKQKT
>NZ_CP042432.1|WP_132129553.1|2397259_2400400_+|glycoside-hydrolase-family-92-protein
MRILTLATYLLFVVTDGFAQAPALWKIGENDGSTRGMALEGNAYGRFIEHDFGFEDGFFLAGYSAGEEDFPYVLPGPASAWGGTGPTAGIRSHFLNIYFEVGEKGTAGDWRFVLDVLDTDPLHPPLVKITVNGAAWKRRMEKGSGMENPDGEFSNEHEQLFAIELPDSLIREGFNEITITTLEGGWLAFDQVKLESSTGSSLLDAAEVLVREVKSASYEIKKENGLFQPLLLDILHLSGTPSIRLELDGKPILDQTAERGAYVLEAPMPAVQQERTSRYSLFINGKLAKKGSVKRFPARVAGPAGYVNTLMGTGHSRWMIAPGPWMPFSMVKLSPDNQDGGWQAGYDPTFESIGTFSHIHEWTMAGLGTFPVNGPLQIRMGNQNDPESGYRSRIDKSTEAAPLGYYQVRLSDYDITAELTATTRAGFQRYTYHQGDTGRIMIDLLVPAEYGYQIRDFRMNLVGDRRIEGYSHQLSKGVWSGGVNQDYIVHFVIEFDRPVINAGAWLDGKVKPVTALQSDSAENAGMYVEFDVRDNRSVQMRSAISYVSIENAALNLETEISRPFGWDFNAVRGNQENTWNELLSRLQIFSADRREKMRFYTNMYRSLASRNIFSDVDGRWVDAGEQVRQFKDPADVALGCDAFWNTFWNLNQFWNLVTPEWSEKWVKSQLAMYDTGGWLAKGPAGMEYIPVMVAEHEIPLIVAAYQMGIRDFDVEKAFKAVYKMQTTPPEWVGGGLAGNLDLVTYLEHHYVPYDEGRFSNSLEYSFDDWAVSQFAKALGKDSAWNEFRDRGTWWRNAIDPETGYARMRDAAGEWLPDFDPFKSGANHHYVEGNAWQLTFFVPQDVPGLAGMIGKDDFTERLEWGFEESYKWRFNGPNDQYWDYPVVQGNQQSMHFAYLFNWVEKPWLSQKWSRAIADRYYGYGVSNAYLGDEDQGQMSAWFVMNALGLFQIDGGARANPIYEIGSPLFEKTVIDLGERYGRGRTFTIEARNSSRKNKYVQKATLNGKPLQNFWFDARELLKGGSLVLEMGPEPNQQWGRGQLPPAP
>NZ_CP042432.1|WP_132129552.1|2395146_2397099_+|putative-porin
MFRIKLLFIILLLPFAALAQQPDTTDTPGRRESGTPGNDTLRIYSPLTVTLINERSMNSDSLVTHPIDTSINKFQNYSEFYRNDDYYVNLGNLGLAARNLLTDFDKGIGFRTGQRALDIYQYDKSKLDYYRTRSPYTELYYVSGGRPEQIFRFIHTQNIKPRLNAGVEYRKIGSEGYYPNQNTNHLNLAAFTWYQSENLRYNLIGNIVYTDLRAPENGGLVNDSIFEIPSNEDQILQERVFLEDARTRWRGTAIYLKQYYNIGRVDRIDTGKTYAEKVYPHQRVSHSIYLENRSYTYQDKSGNPSYYYFIYNSEPNPLDSIHYRNIENEFTLSVFGRTGQKQRAFSKAAILQAGIKHRLVSYAQGPIDTTFNVLSLKGQAGYQLSEKLGIIFNGERVFLGPYDGDVTLSADARLFISENIGEIRLGGLYQRKRPEFMFENYYSSYHRWEQDYERINLSQLSFSYYHDKLKLGLSGEYSLISNYTFFRGRDNYVVPYQFTGEMDILKVTLEKDLNFLKNFVFSGHLVYQYSNYRNILLTPEAYAYGSLFYRNKLFGVLDFQLGVDVRYFTETEAYSYAPELGRFFVDDNAKTIGDYPIVDLFLTADLRRTRFLVKFDHANQGFPERGYYTVKRYPMPNRTLKFGISWRFYD
>NZ_CP042432.1|WP_132129551.1|2394051_2395125_+|tetraacyldisaccharide-4'-kinase
MLKIIRLLLLPFSWLYGLVVVLRNLFYDKGLFKSRGFDLPVIVVGNLEVGGSGKTPVIEYLIRLLKDRCRVAVLSRGYGRKTAGFIRTDSKEKSKVSAASIGDEPFQYLSKFSNITVAVDADRVAAIRRLEADHDAILLDDAFQHRRLIPGFSILVLDYNTLFRTRLLLPAGNYREPFSGRRRAGLLLVSKAPHDLSPAERQRIIKRLAPASGQPVCFSSLEYDELRSLDPANVPTDLSGETRVLLLTGIARPEPLVSQLKKVTPHVTHLKYPDHHSYTVKNIAKIAEVFEGIDSRDKIILTTEKDAARLRGEELKGMLVQLPVFYWPVRIKIHEPDRELFNGKILEYVKLGEARLN
>NZ_CP042432.1|WP_158640596.1|2393865_2394006_-|hypothetical-protein
MKKIPPGEGAADRGSPDRSWRAGVAGLLGNHYESKSTGKPSEEIKK
>NZ_CP042432.1|WP_132129550.1|2392486_2393851_-|DUF839-domain-containing-protein
MSTHKNTFRDSRRSFLKNSGIVSIGFLGLHRFALGASRQGTPGVYDRYGPLLPDPAGIMDLPKGFSYKIISRKGEKMADGLLSPGRNDAMATFQGPGDKVIIIRNHEITSDDLENGPFGLQQELLKKIDPEYVYDYGFGKTPSLGGTTTLVYNERSQKLELEYLSLAGTIRNCAGGPTPWGSWLTCEETYESRKEGQNEQDHGYVFEVPASAKIKPAKPVALKAMGRFNHEAVAVDPETGIVYETEDRHDGLIYRFIPTQPGKLSAGGKLQALAVKGEKSFDTRNWEQTTIEEGKPLDTEWIDLENVDSPVDDLHIRGFEQGAARFARGEGMWYGNNEVYFACTNGGKEKQGQVFRYIPRSGKLELFAEPNDKQLLRHCDNLTVSPWGDVVLSEDNESPRILGITPAGEIFHLAHNVGYESELAGVVFSPSGKTLFVNIQHAGLTLAITGDWKH
>NZ_CP042432.1|WP_132129549.1|2391568_2392042_+|peptidylprolyl-isomerase
MIMSEKITSGKVVGLTYTLKNDAGDTVDQSQPEQPFQYLHGHQNIVPGLEKQLDGLEVGTEKKIAVSPEEGYGAFDDQLVFRVPAANFPQEVELQPGMQFQSEGPQGAMVVTVTGVENDVVTVDGNHPLAGQVLHFDVKVDSVRDATDIELEHGHVH
>NZ_CP042432.1|WP_132129548.1|2389780_2391412_-|L-glutamate-gamma-semialdehyde-dehydrogenase
MSTGFFKVPAPVNEPVLNYAPGSPERKALKSAIEAARSATADIPMFIGRKEIHTEDKQEIRPPHDHQHVLGHYSKGDESHVQAAIEAALAAKPAWEDLAWEQRAAIFLKAADLLAGPYRARINAATMLGQSKNAYQAEIDAACEMIDFLRFNVSYMSEIYAQQPGSAKGIWNRTEQRALEGFVFALTPFNFTAIAGNLPTAPAMMGNVVVWKPANTQIFAAHVLMEVFREAGLPGGVINLIYTDGPVAGEVIFSHREFAGIHFTGSTAVFQQIWKEIGNHIGNYRSYPRIVGETGGKDFVLVHPSASINMTSTALVRGAFEYQGQKCSAASRAYIPKSLWPELKKRLLEDISSLRMGGVEDFRNFINAVIDEKSFDKITSYINRVKNDPQAEIIAGGDHDKSTGYFISPTIIQTTDPMYVTMCDELFGPVLTVYVYEDEDFRSIPRLIDSTSIYALTGAVIARDRYAIEWLEKELRHSAGNFYINDKPTGAVVGQQPFGGSRGSGTNDKAGSMVNLLRWVSTRSIKETFDPPVNYRYPFMEEE
>NZ_CP042432.1|WP_147698301.1|2403619_2406448_-|outer-membrane-beta-barrel-protein
MRLKIYFSLFPFLVLLLSAGQTSGQSASVSGLVADSADQLPLRGAHVKLATPQDSTVQETILNDKGNFLFRNIPGGDYHLTIQFLGYATHSSQLTVKEGQEYQAGTILMGVNATELGLIEVLGKPVPVQIKGDTTEFNAAAYTTPPYSDAEELIKKLPGVEVGADGSVKAQGEEIRKVLVDGKEFFGNDPQIAMKNLPADIIDKIQIIDDQSEQAKFTGFDDGNRIKTMNIVTRPDKRVGQFGRMNASLGNQDRYSAGGNYNYRNGGNRYTVIGMTNNVNQQNFANQDLLGVMGGGGGRGRRNNDFYIGSRNGNTVTNALGVDFNGEWLEDTDISGSYFYNSASNNLDQFTNREYILGKNTNQLNQRESGSESRNFNHRVNLQVEYEIDSMNSISLRPNLSFQDHNSHRTSYSETMLSTGEALNNSRSNNFSDNSGYRFDGGMTFRHRFQKRGRTISMNIDASSNTNRSLSNNNSLNLFYKNGVENRLDTIDQLGNSESGGWGFTSRISYTEPLGEYSRLRTNYSLRNTESSSEREIYDYLVATGQYELLNTDLSNEFLNDYMYHRAGLAYQYSKEKFSVDFGMEYQHAHIENRQVFPEVFDAGRSFSSILPEASLSYEFAERQRLRLSYRTDTDAPSISQLQNVIDNSNPLNIRSGNPDLKQAFAHNFSLRYNSFDRETEQHFFASFSADFSNNRIVNSTFIASGDTTIDGHIVLGKGARFSRPENINGFYALRSHASYGKPIEALKLNVNLNTGLSHTHDVGFLNRESTWSNSYGINQGVSLHSNISENINFGAATNINFNITRNDRQAELDRNYFSQNVSVYGTYIFWKGLRVSTNFNYNYNKGYADGYDERFLLWNASVGKSFLKKENAEIRLSAYDLLNNNTNISRNVTERYIEDSRSNTLQQYFLLSINYHLRSFGSGGEGFRRGGPGGRGGRRSF
>NZ_CP042432.1|WP_132129558.1|2406601_2407045_+|peptidylprolyl-isomerase
MTKGIIKTEKGDLPVIFYDKDAPGTVENFLKLARSGYYDGTTFHRVIPDFVIQGGDPTGTGAGGPGYSIKCELDGDNQYHDRGVLSMAHRGRDTGGSQFFICHSRNNTAHLDRNHTCFGKVEANLEVIDQIKQGDKILSIEIIEEEA
>NZ_CP042432.1|WP_132129559.1|2407041_2407473_+|DUF5606-domain-containg-protein
MNLKGIVSVTGKPGLYKVIGQNKSGFILETLDEARNKLLINPNTRIAALTEITIFGLEDDIRLRDIFEKMGARAKELPVPEPKADNKALKDYFEKISPDHDKDRVYVSDIKKIVSWYGILSSLPLWEEKEEAPEAEQDEDGTE
>NZ_CP042432.1|WP_132129560.1|2407469_2407946_+|hypothetical-protein
MIPAFKYTGLGAVLFCLLLSACEESACDTSTRTAIQLKFYSRTTDSIPKDTVITLDLEGIYGIGREDSILFEGASVSLVTLPLPLEGDSCQFVMEFPTQSDTLTLTFDRQLRYISKGCGFVTWFTIRDATITENAVRNISIVEPSVTTSNEENIKLYF
>NZ_CP042432.1|WP_132129561.1|2407917_2408631_+|hypothetical-protein
MRKILSCIFSLLLFCGGLSAQDTTATVPADTAGTSEPPKPRRIDTIPWERSGLRVGIDLLKPILSFVNNQPQGAEFSLDYEVKKNYFAVLEAGWQQLELDEVRYNYTTKGMFTRLGVDYNFMKRRQPLSGEMAFVGIRYGFSSFSLQADSVLLTEKYWGDLLTSVPKTTLQGHWAELLLGVKAEISENLFLGWTIRAGFLVAGGVTKREVVPIRVPGYGRTEKKPVFGFTYSVYYRF
>NZ_CP042432.1|WP_132129562.1|2408728_2409202_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MRIKLIQAGKTEEKFLREGVELFEKRLKHYISFQTLTLPALKNTRNLTEQQQKEKEGTALLDSFQPNDRIVLLDEKGKHFSSEEFAAYLNAAMNKSVQQLVFVIGGPYGFSPAVYEKAHEQISLSKMTFSHQMIRLFFTEQLYRAFTILRNEPYHHG
>NZ_CP042432.1|WP_132129563.1|2409224_2411486_-|aconitate-hydratase
MAFDIAMIKKVYEELPGRIAAARNLVNRPLTLTEKILYAHLSDELPGEAFARGNSYVNFAPDRVAMQDATAQMALLQFMQAGKPRVAVPSTVHCDHLIQAKTGAQEDLNRAIDTNREVYDFLSSVSRKYGIGFWKPGGGIIHQVVLENYAFPGGMMIGTDSHTPNAGGLGMVAIGVGGADACDVMAGMPWELKFPRLIGIKLTGKMNGWTSAKDVILKVAGILTVKGGTGAIIEYFGEGAESLSATGKGTICNMGAEVGATTSIFSYDSRMADYLRATDRADIASLAEGIAEHLTGDPEVYANPENYFDQVIEIDLSELEPHVNGPFTPDLAWPISKLAQVVKEHNWPAKLEVGLIGSCTNSSYEDISRAASVAKQAVSKNLKVRSEYTVTPGSEMVRYTVDRDGFLDIFKEMGGVVLANACGPCIGQWARHSDDPDRKNSIITSFNRNFAKRNDGNPNTHAFVASPEIVTALAIAGDLTFNPITDTLVNENGEQVKLDEPQGIEFPAKGFAVEDNGYVAPAADGSGQEVAVKPDSDRLQLLEGFKPWKGTDLNGLKLLIKAKGKCTTDHISMAGPWLKYRGHLDNISNNMLIGAINFFNEKSDSVKNQLTGEYGPVPAVQRAYKAAGVGTVVVGDENYGEGSSREHAAMEPRHLGVLAILVKSFARIHETNLKKQGMLAITFSDPADYDKVQEDDTIDITGLTDFAPNKQLTVILNHRDGSKDEFPVNHTYNEQQIEWFKAGSALNLIKQKQ
>NZ_CP042432.1|WP_158640597.1|2411765_2412143_-|DUF2752-domain-containing-protein
MESILKIALPKRWAKLLFGAGAVIALGLYFAFDPSMAGFFPPCPVKKFTGLECPGCGSQRALHALLHLHFADAFRFNPLAFTAILFLVYDRLAGKGPLRHPHAPWIVLVIVILYWMLRNVSFYPF
>NZ_CP042432.1|WP_132129565.1|2412127_2412439_-|CD225/dispanin-family-protein
MDEINLTNQAPDNPTPPPARPKNWLVESILVTVLCCLPFGIVGIIYAAGVNSKYDAGNYPDALESSRQAGKWTKIGFFVGIAGIVLYVLFFVILGFGAMWSQF
>NZ_CP042432.1|WP_132129566.1|2412475_2413138_-|polysaccharide-deacetylase-family-protein
MYLVKTPYLLKKLYPTSLIWNMPRDEKVVYLTFDDGPIPGVTPWVLETLKQYEAKATFFCIGDNVRKHSEIYREVLEEGHAVGNHTFNHLKGWKTPDQVYLENIGKCAGFVKSNLFRPPYGRIKRSQIKELRQAALIPPPGGNIAAPFPANIIMWDVLSGDFDPGLSPEKCLKNVLAYAENGSIVVFHDSIKAEKRLRFALPRALAHWKEKGIQLKKLKF

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Crispr_ID: NZ_CP042432_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_11

2547173-2547271

Orphan

Consensus_repeat	Method
CGCCCTGCTTCTCTGAACATTTAGGATGGTTCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_11

>merge|NZ_CP042432|11|2547173-2547271|CRISPRCasFinder
CGCCCTGCTTCTCTGAACATTTAGGATGGTTCTGCACATTCATGAATGAAGTCGAATGCTTACGCGCCCTGCTTCTCTGAACATTTTAGGATGGTTCTG

>NZ_CP042432|11|11|2547173-2547271|CRISPRCasFinder
CGCCCTGCTTCTCTGAACATTTAGGATGGTTCTGC	ACATTCATGAATGAAGTCGAATGCTTACG
CGCCCTGCTTCTCTGAACATTTTAGGATGGTTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132130184.1\|2533880_2534063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130191.1\|2541568_2543038_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP042432.1\|WP_132130186.1\|2535773_2537303_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP042432.1\|WP_132130197.1\|2550867_2551578_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP042432.1\|WP_158640604.1\|2552225_2552393_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP042432.1\|WP_132130189.1\|2539721_2540435_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP042432.1\|WP_132130196.1\|2550242_2550644_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP042432.1\|WP_132130200.1\|2553929_2557013_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|188247
NZ_CP042432.1\|WP_132130202.1\|2558053_2558593_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP042432.1\|WP_132130203.1\|2558748_2559126_-\|glyoxalase	unknown	unknown	gnl\|CDD\|319947
NZ_CP042432.1\|WP_132130193.1\|2547551_2547776_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130198.1\|2551610_2552210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380133
NZ_CP042432.1\|WP_132130182.1\|2532832_2533330_+\|3-deoxy-D-manno-octulosonate-8-phosphate-phosphatase	unknown	unknown	gnl\|CDD\|319769
NZ_CP042432.1\|WP_132130194.1\|2548049_2549354_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|223362
NZ_CP042432.1\|WP_132130190.1\|2540978_2541545_-\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP042432.1\|WP_132130183.1\|2533320_2533911_+\|septum-formation-protein-Maf	unknown	unknown	gnl\|CDD\|234807
NZ_CP042432.1\|WP_132130181.1\|2532059_2532836_+\|DUF2520-domain-containing-protein	unknown	unknown	gnl\|CDD\|378484
NZ_CP042432.1\|WP_132130188.1\|2538518_2539682_+\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223222
NZ_CP042432.1\|WP_132130195.1\|2549377_2550238_-\|energy-transducer-TonB	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130187.1\|2537259_2538522_+\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380582

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130191.1\|2541568_2543038_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.45375e-127
NZ_CP042432.1\|WP_132130186.1\|2535773_2537303_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP042432.1\|WP_132130197.1\|2550867_2551578_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	1.30037e-25
NZ_CP042432.1\|WP_158640604.1\|2552225_2552393_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	3.10324e-05
NZ_CP042432.1\|WP_132130189.1\|2539721_2540435_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.35497e-116
NZ_CP042432.1\|WP_132130196.1\|2550242_2550644_-\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	1.27983e-21
NZ_CP042432.1\|WP_132130200.1\|2553929_2557013_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|188247	TIGR02795, Uncharacterized_protein_in_oprL_3'region, tol-pal system protein YbgF. Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction.	8.805e-19
NZ_CP042432.1\|WP_132130202.1\|2558053_2558593_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	4.43827e-56
NZ_CP042432.1\|WP_132130203.1\|2558748_2559126_-\|glyoxalase	gnl\|CDD\|319947	cd08359, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	2.17391e-26
NZ_CP042432.1\|WP_132130182.1\|2532832_2533330_+\|3-deoxy-D-manno-octulosonate-8-phosphate-phosphatase	gnl\|CDD\|319769	cd01630, HAD_KDO-like, haloacid dehalogenase-like (HAD) hydrolase, similar to Escherichia coli 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase KdsC, and rainbow trout N-acylneuraminate cytidylyltransferase. KDO 8-P phosphatase catalyzes the hydrolysis of KDO 8-P to KDO (3-deoxy-D-manno-octulosonate) and inorganic phosphate and is the last enzyme in the KDO biosynthetic pathway. KDO is an 8-carbon sugar that links the lipid A and polysaccharide moieties of the lipopolysaccharide region in Gram-negative bacteria. An interruption in KDO biosynthesis leads to the accumulation of lipid A precursors and subsequent arrest in cell growth. The KDO biosynthesis pathway involves five sequential enzymatic reactions. This family also includes rainbow trout CMP-sialic acid synthetase which effectively converts both deaminoneuraminic acid (KDN, 2-keto-3-deoxy-D-glycero-D-galacto-nononic acid) and N-acetylneuraminic acid (Neu5Ac) to CMP-KDN and CMP-Neu5Ac, respectively. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.51182e-57
NZ_CP042432.1\|WP_132130194.1\|2548049_2549354_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	7.13927e-129
NZ_CP042432.1\|WP_132130190.1\|2540978_2541545_-\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	1.54164e-22
NZ_CP042432.1\|WP_132130183.1\|2533320_2533911_+\|septum-formation-protein-Maf	gnl\|CDD\|234807	PRK00648, PRK00648, Maf-like protein; Reviewed.	9.17156e-85
NZ_CP042432.1\|WP_132130181.1\|2532059_2532836_+\|DUF2520-domain-containing-protein	gnl\|CDD\|378484	pfam10728, DUF2520, Domain of unknown function (DUF2520). This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases.	4.96422e-45
NZ_CP042432.1\|WP_132130188.1\|2538518_2539682_+\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	6.50756e-49
NZ_CP042432.1\|WP_132130198.1\|2551610_2552210_-\|hypothetical-protein	gnl\|CDD\|380133	pfam18175, HU-CCDC81_bac_2, CCDC81-like prokaryotic HU domain 2. Second of two HU domains found in bacterial proteins typically fused to a C-terminal transmembrane helix and an extracellular peptidoglycan-binding domain. The HU domains in many of these proteins are predicted to function in tethering the nucleoid to the cell envelope.	1.79754e-07
NZ_CP042432.1\|WP_132130187.1\|2537259_2538522_+\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380582	cd06359, PBP1_Nba-like, type 1 periplasmic binding component of active transport systems predicted to be involved in 2-nitrobenzoic acid degradation pathway. This group includes the type 1 periplasmic binding component of active transport systems that are predicted to be involved in 2-nitrobenzoic acid degradation pathway; their substrate specificities are not well characterized.	0.00243268

>NZ_CP042432.1|WP_132130191.1|2541568_2543038_-|amino-acid-permease
MFYKKPLQVLLAESEAEGGLKRTLTARNLVALGIGAIIGAGIFTLTGTAAATNAGPAVMLSFLLAAFACVFAGLCYSEFASMIPIAGSAYTYAYATMGEFIAWIIGWDLILEYLFAASTVAVSWSGYVVSFFRDIGIHLPSNIASAPYDYNSATGELTSTGGLINFPAMFIVAIVTTLLVVGIRESTKFNNIIVLIKVTIILLFIGFGIAYIDTDNLTPFIPENEGPGLYGWSGVLRGASIIFFAYIGFDAVSTAAQEAKNPQKDMPKGILGSLAVCTLLYILVSLVMTGVVSYEALNVPDPVAVAVNAAGPDLFWLRFPVKIGAIAGLSSVILVMLMGQPRIFYAMAHDGLLPAVFSKIHPKFRTPYISTISTGLVAILIAGFAPINLLGELVSIGTLLAFMIVCGGILVLRYTNPELPRPFKAPLFPFTPIMGILVCGFLMVSLPWHTWERLLIWMAIGILIYFLYSKRHSKIGKLARLAGKDEKLK
>NZ_CP042432.1|WP_132130190.1|2540978_2541545_-|MarC-family-protein
MGFSLKEIASVTMILFAIIDILGSIPVVIELRNRAGHIQSEKATIVAMALMILFLFIGEELLQLIGVDLPSFAIAGSFVIFFISMEMILGINVFKDEVPETVSIVPLAFPLLAGAGTMTTILSLRSEYRIENIITGIVINCIIIYLVLKNVRRLEAILGKTGVSILRKAFGVILLAIAIKLFRGNTGL
>NZ_CP042432.1|WP_132130189.1|2539721_2540435_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEFRKERKLKRWGKMAKVFTKLGKEISMAVKEGGPDPASNARLRVVIQNAKGANMPKDRIESAIKRASSKDEKGYEELVYEGYGPHGVAILIETATDNINRTVANIRSYFSKHNGSLGTSGMLNFIFERKGIFRVNPEGVDMEELELELIDCGAEEVFEDENELIIYTQFEDFGKMQKALEEKQLNVISSELQRFPLSVVEVTAEQEEELNKLIEKFEDDEDVNAVYHNMDTA
>NZ_CP042432.1|WP_132130188.1|2538518_2539682_+|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase
MRYHHYLRTAEKIIGEYGYETPLPFFLRNYYRANRRMGSTDRRTAGSLVYGYFRTKALLEHLPVDEHLKASWFLCHEESTPLLAALQPEWDQHATLPSADKLALLEGVYGLLDPLRLLPFRDHLSEGIDAGPYSLSMLKQPRLFIRLRPEKAGEIKERLEAEGLSFAQPEPFCLSLDNSSRADQLLEAFKGYFEIQDYSSQLTGRCFHPAAGESWWDACAGSGGKALLLQALEPDVKLYLSDNRASILRNLKERLKAAGITDYRLQETDLISEKPSWEKESFDGIILDAPCSGSGTWGRSPEMRAAFKEEHIKEFRSLQERLVKNVLPYLKPGSPLVYITCSVFREENEQLVEAVCQAGELEVEEQALLKGYEYSADTMFVARMLKR
>NZ_CP042432.1|WP_132130187.1|2537259_2538522_+|amino-acid-ABC-transporter-substrate-binding-protein
MTSVPNLLQRLNGNSRFFLCLFLAAGLGFSSCSRKVFTGKGRQKEKEKEEVKEEPEVEKDKGPFKREAPVLSLLLPFRLDQVDPGSANSLESLRKSEVALDFYQGFRMGLDSLSAMGASFKLQVYDTRDENTTISRLTMKPELAESELIVGPVFPSGMNIIGRFAQNHQVYFISPLAPRIAVEDNAYQIVATAPMEMHTNKAAGFIAGRLRPSSVLVLSTANAEESKYIGSFMKQMREKSSSLQVTEIDVGSFGSNISSLKEYLHEGQNVLVVPSLSSTFWKILFSYLDMQPGSYQFSIIAHPELPEVENIDMVKAEKYQVYLTSSGGMPPKAESSGFYHAYEQKYGLPPSAYAAKGFDLAMYFGTALWNQGQELTEAIKEPYSGYHNEFDFSQTPDGYINRGVKVLKAHNYEFSEVEQE
>NZ_CP042432.1|WP_132130186.1|2535773_2537303_+|glutamine-hydrolyzing-GMP-synthase
MPEKIIILDFGSQYTQLIARRVRELDVYCEIHPYNHLPEFDADVKGVILSGSPCSVRDEDAPDIDLSLLNGKFPLLGVCYGAQYIAQHSGGNVLPSTIREYGRAKLQFIKEENALLRGLSLGTQVWMSHGDTIASLPAEFEVIAGTDTVKVAAFHVPGTKTYGIQFHPEVTHSLEGKKLLENFLVDICGCARDWTPFAFIESTIEDLQKTLGSDKVVLAISGGVDSSVAALLLHKAIGPQLHCIFVDNGLLRKNEFGDVLDSYKHMGLNIRGIDAKERFYSALSGISDPELKRKAIGRVFIEVFDDAAHEIKDVRWLAQGTIYPDVIESVSVKGPSATIKSHHNVGGLPDFMKLKVVEPLKSLFKDEVREVGRSLGLDPSILERHPFPGPGLAIRILGEVSPEKVRILQEADAIYINILKETGWYHKVWQAGTIFLPVQAVGVMGDERTYEHVVALRAVESMDGMTADWSHLPYELLARVSNEIINNVKGINRVVYDISSKPPATIEWE
>NZ_CP042432.1|WP_132130184.1|2533880_2534063_-|hypothetical-protein
MKTLNVMYFSIVIILAGTFFRFIDLHSSLVQWTANILLIAGAVICLMSVFAYIRPDEDRA
>NZ_CP042432.1|WP_132130183.1|2533320_2533911_+|septum-formation-protein-Maf
MGLILASKSPRRQELLRGMGLEFEVMLREVDETYPPGLAPAEVAVYIAEKKARAFHNEAIEDKLVLTADTIVVLEQEVLGKPAGRDEAARMLEKLSGKKHEVITGVALLIKGELITFSDKTAVRFARLSAEEICFYIDNYQPFDKAGAYGIQEWIGYNKISGIEGSYTNVVGLPTEKLYSYLSGLYPQALSSSGRM
>NZ_CP042432.1|WP_132130182.1|2532832_2533330_+|3-deoxy-D-manno-octulosonate-8-phosphate-phosphatase
MTFHSRLGSITTFIFDMDGVLTDGSLFATETGELVRRFNIKDGYALKLAKEKGFHVALISGGKSPSAKQRFLDLGIPDVYMGVADKAEVFKDYLFENDIEAGQVLYMGDDLPDYDVMKMVGLPACPSDASGEIKAISLYISPFCGGEGCVRDVIEKVLKVQDKWV
>NZ_CP042432.1|WP_132130181.1|2532059_2532836_+|DUF2520-domain-containing-protein
MRISIIGSGNVATHLGKAFYHSGHEIADICSPSPGHARALASLVNARALTQPSALRKDIDLCLIAVKDDVIEQLASALDFRETVVAHTAGSISMQTLSGSSPYYGVFYPFQTFSAFREPDISRVPFCLEANRQQALERLRELAESIGGKIVEVDSPGRKTLHLAAVFASNFTNHLYALAGELIREKGLPFDIMRSLILETAEKAVNADPFTAQTGPAVRNDQKVIREHLHQLEGQPALKQLYSLLSASILNSHKKPNI
>NZ_CP042432.1|WP_132130193.1|2547551_2547776_+|hypothetical-protein
MKLSKMSIKKSMALFGIAGMFAGAVACNSPQNDSQNDSEELDPGTENMYEEPMPSDDTTSAVDTTLTDTLDNGF
>NZ_CP042432.1|WP_132130194.1|2548049_2549354_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MDYRETIDYLYSRLPVFHKIGLPAYRPDLRNINTLCQRLENPQNRFRSVHIGGTNGKGSVSHMLAAILQTAGYKTGLYTSPHLVDFRERIRVNGCMIPEEDVVRFVAANRSGIEGISPSFFEVTVAMAFWYFALQEVDIAVVEVGMGGRLDSTNIITPELSVITNIGLDHVHVLGSTLDAIAGEKAGIIKFGVPVVIGEYQEETAPVFREKAAQMQAPVHFASLDWDVNSINREEGFLEIAVRSSTFGKTLDLQLDLTGGYQKKNIRTVLSAVEELKKRGFTVGDKIVRDAVRRVKALTGFAGRWQILSAAPLMVCDTGHNQDGIREVLQQISATPHEKLHIVFGMVNDKDVEKILTILPQKACYYFCKAGVPRAMDENVLQEKAFAAGLRGEAFTSVKEAVEAARQAASVLDMIFIGGSTFVVAEAIVAANTL
>NZ_CP042432.1|WP_132130195.1|2549377_2550238_-|energy-transducer-TonB
MANYQYIDQPPQWKKALAYASGVYIVILLVLYFVYIRTQQETREEILSGGIEINYGPDEVGMGTDYTSMEAVSASPEANNRPPVETQEEVAASSNPVPEADERRIATQDFEEAPAVKSSNNPEVTAKPVEGPVTNNDHSQPEEKKEPVVNQNALYKGNQSEGAGSGDGTGTQAGNQGAQTGNNLSNSYEGTGSGGGGIALNLAGRYFTSRPTLQDDGQSTGKIAVQITVDRSGNIKTAKAGARGTTISSAALWAKCEQAVMNAKLNPIAKGPEIQAGTVVFTFILR
>NZ_CP042432.1|WP_132130196.1|2550242_2550644_-|biopolymer-transporter-ExbD
MNIRKRHKVQAEVNAASMNDIMFFLMLFFLIASLVINPNVIRVQNPRSESGDTYSKQTVNITLTKDLQLYIDKRPVSVGMLDSLLQNYPRGNNNELSAVLYVDRSVDVQHLVDIMDACNRNQVKMVLATDKEQ
>NZ_CP042432.1|WP_132130197.1|2550867_2551578_-|MotA/TolQ/ExbB-proton-channel-family-protein
MLLLQIGDTLNQAADTLQQALPQNSVIAAEQKVNILSLLIKGGWVMLPIALLLFLGIYIFFERYFTIRKAARYEANLTMQIKQYVLAGNLDGAIALCRNSATPIGRMLQKGLLRIGKPIKDIEGAIENQGKLEVSKLEKNISILGIIAGIAPMLGFIGTIIGVITIFYDISATGEYSIDTVSSGLYQKMITSAAGLFIGILAYIGHHILTMMVDKVILQMETDSIDFIDLLEEPTK
>NZ_CP042432.1|WP_132130198.1|2551610_2552210_-|hypothetical-protein
MDITKSIAILLSTEKQVCIPGLGTLSTSVQHADEHPKKKPAEQSGQKKEGRDHFFPFLAGLAFSEKYDARDRKLAEKIAESRQINPNLAGYEVDKFVIRVKQELSRNGSFELPEVGKLTAGQSGKVIFESLLNDRAIFGLSPVELKPLEHGNMVEVITRKIGFKNVRKNKFKLVWAILIGLIILGLVSLLLVRLNIIGV
>NZ_CP042432.1|WP_158640604.1|2552225_2552393_-|TonB-dependent-receptor
MLDPYADLNFGASYKINTNFGIFLNANNVLNKQYERYLNYQGMGFNMMAGLTFSL
>NZ_CP042432.1|WP_132130200.1|2553929_2557013_-|tetratricopeptide-repeat-protein
MMQFRKKLFPLIFLFFASSYTLFAQQPAYYETNATFRKGLELFDHNQFASAAEMFRQVYTDKQVAGSTPAENGDITMMKADARYYEILCGLELGNRQSQEALLSFITDYPESEKTKSAMFHVGKLYYARKDYPQAIEWFSKVKENDLAGNDRAEYNFKMGISHLETGEDIRALGFFKKAQQPRNPYTNDATYYYAHVSFLKKDYDVSLREFEKLRDVPQYKDAYIYYKSQILLVLDKVDAAIALAEPAFENGRGSEYEAQLAKLLGSAYFNKGEYEKAVEYFGFFLNSTHAADQSSQDSYQIGYSYYKTGDYKNAIILLEPLVNGDDIWTQYAMYTLGDCFLKTDNKQNARAAFERASKLAHDEEIQQHALLQYAKLSYELGFNSFALTATQQYIERFPNSVYIDEARTVRGEVLLSSRNYAEALKVLESVRNKTRQSNELYQKVSYYRGAELFNEKKYEQAIELFKQAVYYSEDRNITALANYWAGEAYYELRYFSEAVANYRAFFANERAASTNVMPFAYYTAGYAYFQNDDFRQAAQHFQQYISSGGSEQGVINDARLRLADSRFVLKNYGQALDVYNSVIASGGSGVDYALYQKGMIEGLRGQNANKAGTLQGIISKYPESGYADDAQFEIGNTYLLEGNVAQATAEFNSLISRYPNSSRAPEAMMKLGLIQYNAGNDEAALATYKKVVSNYGSTAQRREAIQAIRNIYVEQGNAEAFLSYSKTVPNVNISTSEQDSISYQAAYSMYLKGDCEKGVATFSNYLSNFPQGQFTNDVHFYRAECLVRSNKHDEALSDFLYLAEQPKNQYSQRALVAASEIYITREDFVNVLPLLKTLEGDPEYQENQGFAIVNLMRAYNAQGNADSTFYYSQEVLKNEKASTNELNMAHLYAGKSYLARGEAARALEEFRAASKTAKTAVAAEAKYLEAQIQNTSGDYDASEKSCFEVINNMPNQDYWVARSFVLLADNYAKKGNIFQARSTLQSVIDNYQGDDDIVPSAKQKLEEINAADKAEEAAQDSTSNEN
>NZ_CP042432.1|WP_132130202.1|2558053_2558593_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MQQKLLLGSRKFDLVIQRLCHQLIEIHDDFSESAIIGLQPRGIYLADRIHEELKKILPASTVPCGHLDITFFRDDFRRRDTPLVANSTSIDFMIENKKVILVDDVLYTGRTIRSGLDAMMAFGRAARVELLVLVDRRYSRHLPIEPDYIGIQVDSIASQSVKVTWKETEGEDAIYLLNT
>NZ_CP042432.1|WP_132130203.1|2558748_2559126_-|glyoxalase
MKLNAGIITAKMAETKAFYTEVLGFGISFENEFYLLMHSPGGNSEISFLLPDHSSQQPLFHAPFEGRGVYFTIEVEDVDAIYNDVKSKGAAISIPLRDEPWGDRHFAIQDPNGVSIDIVTYSPPA

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Crispr_ID: NZ_CP042432_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_12

2601297-2601396

Orphan

Consensus_repeat	Method
CGCTTCCCGGAGCAGCTGTTGCCGGGCCGCCGGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_12

>merge|NZ_CP042432|12|2601297-2601396|CRISPRCasFinder
CGCTTCCCGGAGCAGCTGTTGCCGGGCCGCCGGCCGCAGGTGGATCCTTAGCGGTGGGGGCGACGCTTCCCGGAGCAGCTGTTGCCGGGCCGCCGGCCGC

>NZ_CP042432|12|12|2601297-2601396|CRISPRCasFinder
CGCTTCCCGGAGCAGCTGTTGCCGGGCCGCCGGCCGC	AGGTGGATCCTTAGCGGTGGGGGCGA
CGCTTCCCGGAGCAGCTGTTGCCGGGCCGCCGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132130229.1\|2584784_2585834_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP042432.1\|WP_132130259.1\|2589302_2592305_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132130235.1\|2594723_2595740_+\|DUF4974-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042432.1\|WP_132130261.1\|2613540_2614248_+\|ATP-binding-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130234.1\|2594025_2594598_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP042432.1\|WP_132130245.1\|2615164_2616187_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP042432.1\|WP_132130240.1\|2606096_2607212_+\|DUF1624-domain-containing-protein	unknown	unknown	gnl\|CDD\|226749
NZ_CP042432.1\|WP_158640607.1\|2614266_2615067_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187602
NZ_CP042432.1\|WP_132130239.1\|2603832_2606070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130243.1\|2612062_2613253_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP042432.1\|WP_132130260.1\|2611035_2611965_-\|D-glycero-beta-D-manno-heptose-7-phosphate-kinase	unknown	unknown	gnl\|CDD\|238577
NZ_CP042432.1\|WP_132130241.1\|2607208_2609611_+\|peptide-binding-protein	unknown	unknown	gnl\|CDD\|238487
NZ_CP042432.1\|WP_147698314.1\|2602581_2603757_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130236.1\|2595750_2599416_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132130232.1\|2587901_2588864_+\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP042432.1\|WP_132130231.1\|2587280_2587823_+\|RNA-polymerase-sigma-70-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP042432.1\|WP_132130242.1\|2609735_2611034_-\|winged-helix-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377630
NZ_CP042432.1\|WP_132130237.1\|2599427_2601152_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP042432.1\|WP_132130233.1\|2592323_2593850_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|380159
NZ_CP042432.1\|WP_132130230.1\|2585950_2587201_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130229.1\|2584784_2585834_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP042432.1\|WP_132130259.1\|2589302_2592305_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP042432.1\|WP_132130235.1\|2594723_2595740_+\|DUF4974-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	2.02239e-35
NZ_CP042432.1\|WP_132130245.1\|2615164_2616187_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP042432.1\|WP_132130234.1\|2594025_2594598_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	8.10504e-22
NZ_CP042432.1\|WP_158640607.1\|2614266_2615067_-\|glucose-1-dehydrogenase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	9.69481e-90
NZ_CP042432.1\|WP_132130237.1\|2599427_2601152_+\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	4.25871e-40
NZ_CP042432.1\|WP_132130243.1\|2612062_2613253_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP042432.1\|WP_132130260.1\|2611035_2611965_-\|D-glycero-beta-D-manno-heptose-7-phosphate-kinase	gnl\|CDD\|238577	cd01172, RfaE_like, RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.	9.33933e-114
NZ_CP042432.1\|WP_132130242.1\|2609735_2611034_-\|winged-helix-DNA-binding-domain-containing-protein	gnl\|CDD\|377630	pfam06224, HTH_42, Winged helix DNA-binding domain. This family contains two copies of a winged helix domain.	4.61258e-61
NZ_CP042432.1\|WP_132130230.1\|2585950_2587201_+\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	3.70494e-42
NZ_CP042432.1\|WP_132130236.1\|2595750_2599416_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP042432.1\|WP_132130232.1\|2587901_2588864_+\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.58218e-27
NZ_CP042432.1\|WP_132130231.1\|2587280_2587823_+\|RNA-polymerase-sigma-70-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	1.65707e-44
NZ_CP042432.1\|WP_132130240.1\|2606096_2607212_+\|DUF1624-domain-containing-protein	gnl\|CDD\|226749	COG4299, COG4299, Uncharacterized protein conserved in bacteria [Function unknown].	6.45188e-68
NZ_CP042432.1\|WP_132130233.1\|2592323_2593850_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|380159	NF033071, SusD, starch-binding outer membrane lipoprotein SusD. SusD (Starch Uptake System D) is an outer membrane lipoprotein that binds starch and participates in a TonB-dependent nutrient uptake complex. Related proteins from similar TonB-dependent complexes that import other, usually multimeric nutrient substrates include RagB and NanU.	7.9405e-46
NZ_CP042432.1\|WP_132130241.1\|2607208_2609611_+\|peptide-binding-protein	gnl\|CDD\|238487	cd00987, PDZ_serine_protease, PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.	2.3167e-10

>NZ_CP042432.1|WP_132130237.1|2599427_2601152_+|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKIKKILSGSLLVLALMAAGSCSDQLSELNENPNGVNPEDGNPNMIMPTVQSGLAMEYLRLGFGNGNLSGVIQHTQEDGWFTSFNHYDWTETDWSVWYGLLRNNKFMMEQAVALDYPFHQGVALTLRAFIYGTITDLWGDAPYTEAVKGDESDELLRPVFDSQETIYKGIIEDLKAASALFAGGDKTGYLENYDIYYNGNTAQWQQFAGTLLLRYSMRLSEKLPELARSGVESVYSSGVYIEEAADDAVMDFPGTNSGNSWPLNVAFNSDESNWRRRKPCQTLLDKLLQYGDPRLEVWVQPVHVQWVANPGLATAVDPFIRQDGVILNGVKAYTDEEFQEKINQQGHTYTRHFNPSLYQPNPPFTVGPLNTAEYVGLPPGLLYPDYHNMNPTTGQSVENQHVSQIANLFKGTGGGLLKARLASAAETHFILAEAALKGWSAGNAKDHYEAGVRSSMETWGVDDQYASYIAGSGVAFNNTLARIMEQKWIAAWTSSAEAWFDFRRTGLPALSPGPASSEPVLPLRFIYGNDELFNNTENANAAVDRLEETSYSGPKGKNSQWSKPWILQGTGEPW
>NZ_CP042432.1|WP_132130236.1|2595750_2599416_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MRHRLTRNLRLIVLLCFFSGSLSLKAQDLASAGAENSSSGAESSPARAENLPDVLGRLESFFNIYFGYDHRLVKDVLVPSRLSRIVYRDPEQQLNFLLRPLHLDFVKVGEKDYVIRAADTGSGEAEGKLEAGAYLHRPFPQENRETFDLLSGRQQELRGTVSNESGEPLPGVSVQVKGTANGTSTDADGQFSLRVPGEDAVLVFTLIGYETREVTPGNQTELAVQLQPDAAQLDEVVVTALGISRDKKSLGYSVGEVDGEAMDNVGNENLLTSLSGRVSGVTINQTSGIGSSTSIIIRGASSLRNNQPLFVVDGVPVASSLGNVSDKGSGNKVDYGNAISDINPDDIESISVLKGPSAAALYGSRAGNGVILITTKSGKKGQGLGVNFSSSNVFEVPYRFLDFHYKYANGERPFLLEESSAYWGGLPLDVGNTAEQWNSPLDENGNKVPTELRSYPDNMKNFLETGITSTNNIALSGSSDKATYRVSYNNMTHKGLIPNSDLHRNGLSANGTYRILDDVSLSTNINFTRSNSKSRPQTAERNGNPLQHVYNWPHVDVRELENYWQEEGTQQLSPAPGDMDNPYFLAYELKNAYTRDRIFGNIKLDWTIAPGFTAFARISHDAYNENRETRIPWSYSEMGQGGYYLENLNRRETNADFLLSHQRNFGSFDLNVSGGGNYMKQRGFNNDVGGAGLSIPNLYRISNIPAGNRLANNYAYEKAIYSLYALASLGFSNQVYLDLTARNDWSSTLPADNRSYFYPSASLSWLANYTFDLPASISLLKLRGGWAQVGNDADPYQLKQSLGPGNWGDLVTTGISGTMLNAALKPEIATSVEGGIDLNMFNDRLRFDITYYNMVNRNQILPIKTASSSGFDNKLINAGKLQSRGWEAGLGFTPIDNRNGWTLDVNTNFSRNRVTLKELIPGMEYYELWGENGGGAYTFVGEQMGNMYGRGHAYVEDPASPYYRWPIIDYDGSNGGMQWQELDGRDNNVKVGNFNPDFLMGLQLNLRYKRFSVDMSFDWRSGGEFMSFTYRYGESDWKSQRQIDNLIPGSHYSPEELVNLLKSDPEKYIIPQNGNYPRVGGHTPETGGFGPDGDGVFIPGVWQDADGEYHEWLGGEGTQYIPITNAYPWGFNRQVTFDASFIKMRELSVSYRIPELFGVIQNATLSVFTRNLMLWNAAKIGIDPERAFWADPGRGGFRQGIERQNVMPWTMPLGFKLDVNF
>NZ_CP042432.1|WP_132130235.1|2594723_2595740_+|DUF4974-domain-containing-protein
MDYREFSVEDFVLDPFFRSWIKYNTPGASEFWSDWLAANPGMTARVEEARELVLCLDFKAGEPSETEIREVKDALTKKFRKPEPGAETASAAARSRRFSFSYPVAAALVFLLLAPLAVHFLRSSKLNISTTFGETRNITLPDGSRVSLNANSRISYARDWEGEDGREIWLEGEAFFDIAEKPQGMKPEFYVHAGELTIKVLGTAFNVYRRAGKTSVVLQEGSVELSSASQPASAGKLLMKPGEKVDFEKGNYKIEKVAVEPFLSWKDHRMVFENTELSGIARMLEDNYGYQVIFKDPALEKLRFTGSYSTERIDVFLKALSEAFNIRVSLKDKTITIQ
>NZ_CP042432.1|WP_132130234.1|2594025_2594598_+|RNA-polymerase-sigma-factor
MAAQTKPGASDWEQAYDCYFPLLFRYSLRFTADRDIIKDLLQDLFLDLYLKRELPGSIRNLRSYLLVSVRRNLLKRLSREAARRMIPFSEESNDFLLELSAESRIIAGELLESRSHYLQKAVDSLTRRQKEAVYLRFYENLSYDEIGEIMGMKEVKYARTLIYRAISEMKATLKKAGSPICLALLLSPRF
>NZ_CP042432.1|WP_132130233.1|2592323_2593850_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKKARLYGIAIAALLMQAGCTDLSEEVYDKLPVGEFGNSEREINALVAPIYRTLKGVYPSNFFLLSECSSDMAITPTRKGGDWWDGGQFKELRLHTWTPNTAVVRDSYNSAFSAITSCNKIYSMVEENPNVPEKEQVLAEIRGMRAYWYYMLLDYFGNVPIVTDFENTELPSTNSRKEVYEFVVSELNAIKDIVRSDVTPASYGKVTQGFVYTLLAKMYLNAEVWNPEGGAKWQECIDACNKVMELDYILEPDWKTNFIVQNENSKEIIFPVVFSTADGGNHIAQRTLHYLDPIALGLKIGTWNGISAMPEYVEAFDPDDKRLAGSFLTGPMLDPATGEVLITAHNRPLIHTVDITLKYNMDADGWGQVEQEDGARCFKWEFESGLNGDAENDFGIFRLADVYLMKAEALVRSGGSNAEATTLVNKIRERAFDDPSKLKTSVTLDDIYQERRFELAWEATSRQDNIRFGKFLDAIPGWKGATPEKCLLFPIPITAINANDNLEQNPGY
>NZ_CP042432.1|WP_132130259.1|2589302_2592305_+|TonB-dependent-receptor
MAFKPIDNTITVIHSARRTINSSPLRRTARITETWNTNLSLAFPDIKSHLEFQQGTVNGTVTDKETGAALPGVSVQVKGTTIGTSADENGKYEVDVPAGAVLVFSMMGYRSLEVPVGNRSVVNVQLEMDLARLEEVVVVGYGTQQQRNISGSVTNLSERDFNKGVNRNAVDMLQGKVAGLIVTTGSGDVSSEKTIRLRGTSSLTGSSAPFVVIDGVPGLNMNSVAPQDIESISILKDASAAAIYGSRAASGVILITTKKGTKGAGKPVVEYEGFVATDKVTNMPEVLDAATWRSYTTENDINTEGMDLGASTNWFEEIMRTAVTQSHSLSMSGGNQASSYRGSLTYLDKQGVVRDNALERFNARLSFNQRALDDRLNLTFTGAMTERNYSPTDTRNFVLAYNMIPVVPVKMEDGSWYDSQSYDQGNPVRNMTYNSFNHKNSLYYGNLKANLTLAEGLTAGINLLKQRESNDYDEYLNSQTERGRNDQGFAKRESWTADKQLIETTLNYELTTGEHDLNFLAGYSYEDNNYQRSGAQNRQFVTDFFGSDNLGAGENLRPADVWSEANMFKLASFFGRVNYTFNSKYILTASLRRDGSSKFGENHKWGTFPSVSAAWLVSDEDFMQSAAFFDYLKIRTGYGVSGNQAGIDPYKTLQLYGQSGRYYDNGSWYTAYQISQNANPNLKWEETAMFNIGVDYSLFNGRLNGTIEYYDKRTSDLLYTYQVPVPPNLYPDMLANVGSMSNKGVEFLFNTDAIRKNDFRWNISLNIAHNENEITELSNEDFSTSSIKTGSAWIRGGSDNTTHIVEEGREVGTFYGWRALGLDENGKYIMDDMVDGKAGLTDEDRTYIGSAQPELTYGIANSFTYKNWEFNFFLRGVSGNDVLNFSRMSYATTQWLPGANVLEDALVNGLTDNPKYSSFYIEDGSFLRLDNASLAYNFDTQNFLGISRFRVFVTGQNLFIITNYTGLDPEITMDGLDPGVEGREYYPKSRTLSFGVNLSF
>NZ_CP042432.1|WP_132130232.1|2587901_2588864_+|FecR-family-protein
MSPISRNMLEKYLRGECSPDEEKHVRNWFDLNDAGEYPTVLDEKEYSRKEQKLWGRLTRSLRGAGMSVKGNRRPYRRAIPYAAAVVLLLSVWFAWEQLNPGFWRNGSSYSTASGEVRSFSLPDGTVVTLNAMSRIKIPADYGRKDRSVYLEGEGYFMVQKNPDLAFTVYSNDIATTALGTIFNVSAYPTDGETIVSLHEGSVSVNRKGGEENSVQHMVLEPGEEIICSGNGNFVRKLFNRMERLGWKDQVIYFDQADLQEVIRKLERYYGVSFDYRELEGDNWELTGEYRYVPLKDILESLSFNYGIKYKIEDEQVTLFK
>NZ_CP042432.1|WP_132130231.1|2587280_2587823_+|RNA-polymerase-sigma-70-factor
MRLFTDEDQLIEGLCNSDPVSFRIIYRLHWKRLFDLACHIMQDEADAEDVVQDVFCSLWYRREQLQIRTALENYLVKAVKYTAFFYLKMQAARRNATLPEEAIPSPVNSTEESLFHKELEAMMNRLLGTLPFKTRRIFSLSRFQGLSYPEIANEMGVSVKTVEYHISKALRRLSARRGLF
>NZ_CP042432.1|WP_132130230.1|2585950_2587201_+|FtsX-like-permease-family-protein
MLFLRSIKESILFALEALRVNKLRTILSLLGVTIGIFLIISVFTVVDTMESKIRTSVQKLGDNVVYIQKWPWGGFGDYPWWDYFQRPVPTLEEHQKLSDRLQTAEASTFNVGIGDRMLEFGTNTVEGVDIIGTTFQFDKVRDLEFSGGRYFTNMEMAKGSNVAIIGATIADGLFGSVDPIGKEIKAAGRQVTVIGTLVKEGDDMFGNTTDEWVIVPVNFARNLVNIRSESSNPDIWVKGKEGVGAAEVEAELRGVMRSIRKLSPGETDDFALNRNDIVAQQLEPVFAIVNFAGWVIGLFSILVGGFGIANIMFVSVKERTNIIGIQKSLGAKNYFVLSQFLVESIALCLIGGTIGLFLVFMLTLVFSSLTGTAVVLSAWNITLGLLISVIIGIVAGYWPAYSAAKLDPVEAIRSGF
>NZ_CP042432.1|WP_132130229.1|2584784_2585834_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MKLSQFGFKLPESLIAHSPAGHRDESRLMVVHKDSGKIEHKVFKDVIDYFDEKDVLILNNTKVFPARLYGTKEKTAAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYFGENDLLVAEVVDNTTSRGRTIRFLFDGTDEEFREAIEILGETPLPKYIKRRPTPEDKDRYQTIYAKHEGAVAAPTAGLHFSRELMKRLELKGVDFAEVTLHVGLGTFRQVEVEDLTKHKMDSEHFMISPEHAEMVNKALAAKQRICAVGTTSMRAIESAVSANKKLKPANDWTSKFIFPPYEFSIANSMVTNFHTPESTLLMMVAAFGGYDLIMQAYNIAVKEKYRFYSYGDAMLII
>NZ_CP042432.1|WP_147698314.1|2602581_2603757_+|hypothetical-protein
MNPRPVFYTGVYRQTAAFTNGFITYSDGIHDDVNKIVWSLLGWDSSLSEQEMLLEYASFFFGAEAAEEAATALLELEKNWEGPIAANKGIDACLRLWENIGKGQPSLSGSWRWRMHLMRAYYDAYTRRRAIYEQELEQEVNQVLLKSAETGPAKAMENAKSILSRADQRVMPVWRQRIVALCDSLFQSVCLQTSVGKYGAKNPERGAVLDFLDRPLNNRWWLEDAFRRIDSLESRQQQVKELETIARWENPGKGSFYDNVGNVSRSPHVLRGPGTDIPGFDWWESGYSRERLSHMVSMRWPEEMVYNGLDTKSGYLVRVSGYGECLLRANGRRLKPSRYGKGIGEIKEFHIPPELLKNGRLTLTWDTINEEHLNWRQHSRVSEVWLIRTED
>NZ_CP042432.1|WP_132130239.1|2603832_2606070_+|hypothetical-protein
MVTLTAGKSPAPGNDPDTSFRQAVSVKYELPEELKGAQLKKLAVDYNGIVYLLTDKGLYRAYETKVAKDLRYTPLSGRIPLDIAVQEGTGHLYYLYGNQFLTNGYAGAPYGMLPEGKYSRLAVASDGKVLLAGEREVAVVENGRLREIGQTMEALISVHVYKGAFYGLTAAAVYRFSGGAINRIHEGEELRAIAFREKEAVLGTDSGYYGIGLSPGSPVFPLQNRVPVPQITALLSVNNVLWAGTPLGVFMEEPAISGSPGTVAAPGLTAAPRQTDTAGSGAPRRQYRYYASKRWLDQDRVTGLAAGPEGNVFVLTPTGLNEIRFITQTLAEKAAFFQHKIRQRHIRYGLIANLNLRIPGDKTTSEMVDTDNDGLWSAFYLGSQAFRYAVTGEAKAKRYAWEAFEAYERLLSVNQLKGFPSRTFERKGFRHSDPERWRDSPDPEWEWKGHTSSDEFVAYIFVSAVLDQLAAETGEEKARVATFIDKILTHIIENDYYLVDIDGKPTMWGRWNPEYINWYPKTIGDRKLGSETIIAGLQLGYALTGKELYKTEAVRLMEEHGYLENILIDLNDIQPTPGYVYMGKDMGMGGWNHSDDEMAFLTYWVLYHYALDDDLREKFSRAIHNRWEIELSERNALWNMITLGTEGSFDKASAFWHLREFPVDLVRWNVRNSHRKDIVLLAPNFRGQSTEELLPPGERMIHRHNANPFKLDGGEGGKSELAGDEFLLPYWMGRYLEVIDAAETF
>NZ_CP042432.1|WP_132130240.1|2606096_2607212_+|DUF1624-domain-containing-protein
METPTTPAKGERLISLDAFRGFTIAAMIIVNDPGGSHHDAYPPLRHADWNGITPTDFIFPFFIFIVGVSIVLSYSPQQARGVPRGKMVGKILKRSAIIFALGVFLNLFPDFNFAEVRLPGVLQRIALAFLACALLFLYTGRRTQAWLSAGILVVYWLLMTLVPVPGYGESLLEPGKNLAAWMDSLLIPGTLYQGTWDPEGILSTFPAIATGITGMLAGHLLISGRTREQKIIWLFFAGLIAYALGNIWNWFFPINKNLWTSSYVLYTSGLAAMTLGAFYFFIDVLGYRKWTKPGLVFGSNAITAYVIAGLLPALLYLSPGGGESINSLFMDGLTGAGLSQPFASLLWALGFCLICYIPVYFLYKKQLFIKV
>NZ_CP042432.1|WP_132130241.1|2607208_2609611_+|peptide-binding-protein
MRKPKLYLLVWLLAVVSCGPGEKVFYVSPEGSDSAEGTLEAPFATLAFAKEQAKTLKAKGFDGALCIYLREGTYYPAEALVFGPEESGSKKDPYLISAYQNEKVVLSGARELTLTWEQYNDSLWKAAVPGGLVFERLFLNGELQQLARYPDYQENVLPFNGWAPDAAAPSRSKHWKNPAGGYVHALHSGRWGGFHYRILGKDAQGELRLEGGWQNNRPSEMHPEYRYAENIFEELDAPGEWYLDRENKLVYFYPPAGKDLSVARVEVPRLLHLIEFRGSMEAPVHDIIIRGLTFTQTARTFMLTREPLLRSDWAIYRGGAVFLEGTERCYIENSMFTNLGGNAVFFSNYHRKSSVTGNEFSHIGASAIAFVGDPGAVRSPSFQYGEFVPAGEMDTIPGPLSANYPAFCLAEDNLIHDIGLVEKQVAGVQIAMASAITVRHNSIYQVPRAGINIGDGTWGGHLIEFNDVFSTVLETSDHGAFNSWGRDRFWHPHRETMDSLAAQHPDWVKLDAIAPTIIRNNRFRCDHGWDIDLDDGSTNYVIYNNLCLSGGIKLREGFYRTVYNNIMLNSGFHPHVWFKDSHDVFRQNIVMDRHRDILLQAWGDTVDRNFFVDSADLAYALSKGLDSNSMAGNPLFRAPGKGDFRVASRSKALLTGFRNFPMDRFGVTSASLRSRALTPEIPDLNFMKTQTAGASQRWMGALVKNIESLAEQSAAGLNEAKGVLVLEIAAESAAAESAAGESAAGSSGLREGDVILACEGTPTPELSALVKSALSNRWKGQLTLLVFRNQAEQEVLLKLQ
>NZ_CP042432.1|WP_132130242.1|2609735_2611034_-|winged-helix-DNA-binding-domain-containing-protein
MASNHRIEGQSRVLQSLARQRIAAQRIENSGCRSAAEVVGWMGAMQAQDYAMAKWAVGLRLPGSNEEQIETALDKGEIIRTHILRPTWHLVAAADIHWMLALSSPHVKAKVKSQDHALELNESLFERSNTIIRRALEGGKHLTRPELMTLLEEKGIRTGDTRSAYFMFRAELDGLVCSGPRREKQFTYALLSERVPGGRIFPREEALALLAERYFTSHGPATIQDLAWWSGLPLKDIRTALAAIQPALGSEKIGEQIYYYSLTASPDAATGTTGPDAAGTSTPDAAAGTPGSDAAAGTTGPDPAAGIPALAPNSGAAGEDRSALSTNKRPAARSRQAHLLPAFDEYLVSYQDRSPALASSLFREVFTQNGIFKPVIVLNGQVAGTWKRTLKKDSVLIELSPFGELSKTAGQAVTSAAARYGRFLGLRAEIIT
>NZ_CP042432.1|WP_132130260.1|2611035_2611965_-|D-glycero-beta-D-manno-heptose-7-phosphate-kinase
MLDSYVWGKVDRISPEAPVPVLSVLRREFRPGGAANVALNVRALGATPLICSLTGNDEAGRTFLSLFGEAGISTEGLIQSDNRPTTIKTRIIGHQQQLMRIDEESTANSSPEETRRLLDRIEQLLREQAISVIIFEDYDKGVITPELIGQVTARALEKKIPVVVDPKKRNFLAYRNCTLFKPNLKELREGLKTELHTGDPGAIIRAAGALQEKLDAELVMVTLSEAGILIRGKDIETIIPAHRRNITDVSGAGDTVVSVAALGLAAGLPPSEFTAIANLAGGLVCEKVGVVPIDREQLLAEVRNFYKED
>NZ_CP042432.1|WP_132130243.1|2612062_2613253_-|pyridoxal-phosphate-dependent-aminotransferase
MSNFLSERINKVSESATIQMAKKARELAAQGHKVISLSLGEPDFGTADHIKQAATKAMEDGFTFYSPVPGYADLREAIVSKLKNDNGLEYTPDQVVVSTGAKQSIANLVISLVNPGDEVIIPAPFWVSYSEIVKLVEGECVFVEAGVENDFKITPEQLEAAITPKTKLFMYSSPCNPTGSVYSKEELAALAEVFARHPHVFIMSDEIYEYINFIGKHESIAQFGDLKERTAVINGCSKGYAMTGWRIGYLAAPKAIAQACDKIQGQVTSGTCSIAQKAAVEAINAGADEAMIEAFRKRRGLVYDLLSEIDGLKLNMPEGAFYFFPDVSSFFGKKYRGETINNAGDLSMLLLKEAHVAVVTGEAFGSAKCIRLSYATSEEVLTEAISRIRKVLEQIS
>NZ_CP042432.1|WP_132130261.1|2613540_2614248_+|ATP-binding-protein
MYDPEAGVIYVSCGNTDAGAKDGDGFIAVLNPDGSVKEMSWVSGLHAPKGMALLNGKLYVTDIDEVKIIDVAGAAVEKSIPVEGAQFLNDLATDGTTAYFSDSRSGKIYSLSQEGTVETVVENAEGINGLECYEGNLYTLDKEGLKMYDVSGYTPTLIDSTVKGGDGLVILNDSTFVASRWAGEIYFIRGSESTVLLDTKAAKSNTADIGYIPDEQLVIVPTFMKNEVAAYKLEM
>NZ_CP042432.1|WP_158640607.1|2614266_2615067_-|glucose-1-dehydrogenase
MDLQLKNKTALVTGGSKGIGKAIALELAKEGANVIICARSEEELADARREIESEGWGVLALVADVTKEEDLNNLVKKSRETFGSIDILVNNAGGIGRQGSFADLNTQDWRSLFELNLFSVVTLTRLVLPLMQEKQWGRIINISSENAEQPYPDMPAYNVTKGALNNLTKTLSKAYGKDGILVNSVAPAFIKTPLVEGMLKNMASGKEGGTTAAEKEFATEKRPGIVRGNAGTAEEVAGLVAFLCSERSSFITGAVYRVDGGSVETI
>NZ_CP042432.1|WP_132130245.1|2615164_2616187_-|LLM-class-flavin-dependent-oxidoreductase
MDQEQLSPIPFSVLDLAVVAEGKTPADAFAQSLDLAREAEKLGYKRFWMAEHHNMEHVASSATSVLLSYIAGGTTSIRVGSGGIMLPNHTPLIVAEQFGTLATLYPGRIDLGLGRAPGTDQTTALAIRRERFHAADSFPEDIRELQSFLSDDNSEARVRAFPGEGTNIPIFLLGSSTFSALLAADYGLPYAFASHFAPREFLRAVRLYRENFKPSEYLQTPYVMSCINVIAAPTDEEAEFLSSSMKLMFRGIVTGLRRPLQPPVKNIDDIWTEMEREAVYQMLAVSFIGGPESLRSGIQSFREQTGVDEVIVSSNIYDHQDRLRSYRLFAEVMKSFAGTT

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Crispr_ID: NZ_CP042432_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_13

2634525-2638065

TypeII

Consensus_repeat	Method
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CRISPRCasFinder

46 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP042432_13

>merge|NZ_CP042432|13|2634525-2638065|PILER-CR,CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGCCGGAAGGGCGCGAACTCTTTTGGTGCAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGAAAAGGTATCCTAATCAGGACCTTGATAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGATACCGACCTATGGGAAAAAGAGTGGTTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAAAAACAGGCGGGGATGGACATAGTTAAAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGATAGGATAATATAGACCGCAGCCCGTCAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAAGGGGCTGCCAGCAATGGTAGTCGCCGAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTCCTCGGTCAAGGTAGCCCAGCTCAAAGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGCAAAGAGTTTTGCGACCCTTCCGATGGCGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCAAAATATGAAAACCGTAACCGGCAGTACGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTTTAGGACGTCTGCGTGGCCGCTTATCTCTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTCCTTTTGCAGAAGAAGTCACGAAAATCGTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCGCCCAAGAGGCGAAGATTGTAAAAGAGTAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCGGATCAAATCCGAAGACCCGGACGAGGAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTAATTCATGCGCGGTAGTAGCATGCATTGTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACACTACGCTTGAACTCGCAAATGGGTCGTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTTGAAAACCGAACATAAAAACAGCGATATGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGATCGACAACTCGGATCTACCTATGGTTCCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTAGGAGAAAATAAAACATGGGCGGAATAGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCCCGCTGGAAGGTATTCCGCAGGGCAAAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAAGTATAACGCAGTTCCGATCTCACTAGGTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGTATCGCTCTGTTCATCGTGTTTATTTTGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTTCGCAGCCTGCGTTGAATGCTGACTTTATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGGCGGTAGCTTGTCTGCTAGTTATGTTATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCGGAAGACAGTTTTTTCGGAAGCAGCGGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGTTTTTGATTAAAGGCCCATCATTGTTTCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTCCGCTGCACCGGGGTCGATCCGGCATATAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCGGGGTCTGCCCGAACGCGTGACGAATCTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTACCCATTGTTTGCGAAATCCATAGGTTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGAAGAAGCAGCCGAAATATACGCAAGCGAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGTGTACGGCGAGATGTATGCATGAAGGCGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAATTGAGAACAACGAAAACGTGCAGAAATGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGGTTTTTAAATTCCATTGCCGGGTTGCCCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTACCCATTGTTTGCGAAATCCATAGGTTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGAAGAAGCAGCCGAAATATACGCAAGCGAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGTGTACGGCGAGATGTATGCATGAAGGCGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAATTGAGAACAACGAAAACGTGCAGAAATGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCAAAAATGCCGTTCGATGATAATATTTTCCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAATACTTGTACGATGGCAAGTCCTTGATAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGCAAAAGGATATTGAGATCAACGATATAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGCAAAAGGATATTGAGATCAACGATATAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCGAGTATGGCTTCAGCTGTTTTTGGTGTTTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGCAGCACTTGCGGAAATTCTCCGTCATCATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGGGGATTCAATCGTTTTTAAAATGTTTGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACACCGTCACGCCAATATTATCCCCGACAAAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCATAGTGGATATTCAGTTTGCCGGAGATAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTACGTTGCCGGATGAAAACATGAATAAGATACTGTGATAAATTTCGTGATTCTGATAATTGAAAGCAAATTGGATA

>NZ_CP042432|13|1|2634525-2637989|PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCCGGAAGGGCGCGAACTCTTTTGGTGCAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GAAAAGGTATCCTAATCAGGACCTTGATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGATACCGACCTATGGGAAAAAGAGTGGTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAAACAGGCGGGGATGGACATAGTTAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATAGGATAATATAGACCGCAGCCCGTCAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAGGGGCTGCCAGCAATGGTAGTCGCCGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCTCGGTCAAGGTAGCCCAGCTCAAAGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCAAAGAGTTTTGCGACCCTTCCGATGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAAATATGAAAACCGTAACCGGCAGTACG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTTAGGACGTCTGCGTGGCCGCTTATCTCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCTTTTGCAGAAGAAGTCACGAAAATCGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGCCCAAGAGGCGAAGATTGTAAAAGAGTA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGGATCAAATCCGAAGACCCGGACGAGGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAATTCATGCGCGGTAGTAGCATGCATTGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTACGCTTGAACTCGCAAATGGGTCGTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTGAAAACCGAACATAAAAACAGCGATATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATCGACAACTCGGATCTACCTATGGTTCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAGGAGAAAATAAAACATGGGCGGAATAGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCCCGCTGGAAGGTATTCCGCAGGGCAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAGTATAACGCAGTTCCGATCTCACTAGGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGTATCGCTCTGTTCATCGTGTTTATTTTG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTCGCAGCCTGCGTTGAATGCTGACTTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGCGGTAGCTTGTCTGCTAGTTATGTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGAAGACAGTTTTTTCGGAAGCAGCGGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGTTTTTGATTAAAGGCCCATCATTGTTTC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCGCTGCACCGGGGTCGATCCGGCATATA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGGGTCTGCCCGAACGCGTGACGAATCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATCCATAGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGAAGCAGCCGAAATATACGCAAGCGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGTGTACGGCGAGATGTATGCATGAAGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATTGAGAACAACGAAAACGTGCAGAAATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGTTTTTAAATTCCATTGCCGGGTTGCCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATCCATAGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGAAGCAGCCGAAATATACGCAAGCGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGTGTACGGCGAGATGTATGCATGAAGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATTGAGAACAACGAAAACGTGCAGAAATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAAAATGCCGTTCGATGATAATATTTTCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATACTTGTACGATGGCAAGTCCTTGATAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCAAAAGGATATTGAGATCAACGATATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCAAAAGGATATTGAGATCAACGATATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGAGTATGGCTTCAGCTGTTTTTGGTGTTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCAGCACTTGCGGAAATTCTCCGTCATCAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGGGATTCAATCGTTTTTAAAATGTTTGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACCGTCACGCCAATATTATCCCCGACAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CATAGTGGATATTCAGTTTGCCGGAGATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC

>NZ_CP042432|13|13|2634525-2638065|CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCCGGAAGGGCGCGAACTCTTTTGGTGCAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GAAAAGGTATCCTAATCAGGACCTTGATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGATACCGACCTATGGGAAAAAGAGTGGTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAAACAGGCGGGGATGGACATAGTTAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATAGGATAATATAGACCGCAGCCCGTCAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAGGGGCTGCCAGCAATGGTAGTCGCCGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCTCGGTCAAGGTAGCCCAGCTCAAAGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCAAAGAGTTTTGCGACCCTTCCGATGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAAATATGAAAACCGTAACCGGCAGTACG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTTAGGACGTCTGCGTGGCCGCTTATCTCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCTTTTGCAGAAGAAGTCACGAAAATCGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGCCCAAGAGGCGAAGATTGTAAAAGAGTA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGGATCAAATCCGAAGACCCGGACGAGGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAATTCATGCGCGGTAGTAGCATGCATTGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTACGCTTGAACTCGCAAATGGGTCGTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTGAAAACCGAACATAAAAACAGCGATATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATCGACAACTCGGATCTACCTATGGTTCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAGGAGAAAATAAAACATGGGCGGAATAGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCCCGCTGGAAGGTATTCCGCAGGGCAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAGTATAACGCAGTTCCGATCTCACTAGGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGTATCGCTCTGTTCATCGTGTTTATTTTG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTCGCAGCCTGCGTTGAATGCTGACTTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGCGGTAGCTTGTCTGCTAGTTATGTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGAAGACAGTTTTTTCGGAAGCAGCGGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGTTTTTGATTAAAGGCCCATCATTGTTTC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCCGCTGCACCGGGGTCGATCCGGCATATA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGGGTCTGCCCGAACGCGTGACGAATCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATCCATAGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGAAGCAGCCGAAATATACGCAAGCGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGTGTACGGCGAGATGTATGCATGAAGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATTGAGAACAACGAAAACGTGCAGAAATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGTTTTTAAATTCCATTGCCGGGTTGCCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATCCATAGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGAAGCAGCCGAAATATACGCAAGCGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGTGTACGGCGAGATGTATGCATGAAGGCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATTGAGAACAACGAAAACGTGCAGAAATG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAAAATGCCGTTCGATGATAATATTTTCC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AATACTTGTACGATGGCAAGTCCTTGATAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCAAAAGGATATTGAGATCAACGATATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCAAAAGGATATTGAGATCAACGATATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGAGTATGGCTTCAGCTGTTTTTGGTGTTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GCAGCACTTGCGGAAATTCTCCGTCATCAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGGGATTCAATCGTTTTTAAAATGTTTGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACCGTCACGCCAATATTATCCCCGACAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CATAGTGGATATTCAGTTTGCCGGAGATAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACGTTGCCGGATGAAAACATGAATAAGAT
ACTGTGATAAATTTCGTGATTCTGATAATTGAAAGCAAATTGGATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_147698316.1\|2651706_2652288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP042432.1\|WP_132130248.1\|2621399_2622041_+\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|227091
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP042432.1\|WP_132130249.1\|2622040_2625313_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP042432.1\|WP_132130246.1\|2616232_2617528_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225990
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	unknown	unknown	gnl\|CDD\|379455
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042432.1\|WP_132130247.1\|2617539_2621295_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.40249e-104
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	1.22925e-71
NZ_CP042432.1\|WP_132130248.1\|2621399_2622041_+\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	7.50162e-35
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	gnl\|CDD\|227091	COG4748, COG4748, Uncharacterized conserved protein [Function unknown].	6.92001e-127
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.28315e-49
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	4.16357e-132
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.02586e-23
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.97769e-99
NZ_CP042432.1\|WP_132130249.1\|2622040_2625313_+\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	1.95387e-41
NZ_CP042432.1\|WP_132130246.1\|2616232_2617528_+\|hypothetical-protein	gnl\|CDD\|225990	COG3459, COG3459, Cellobiose phosphorylase [Carbohydrate transport and metabolism].	3.78604e-05
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.14756e-52
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	8.68491e-51
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	9.92732e-38
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.03329e-21
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	gnl\|CDD\|379455	pfam14079, DUF4260, Domain of unknown function (DUF4260). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 126 amino acids in length. There is a conserved GLK sequence motif.	6.16401e-48
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000413076
NZ_CP042432.1\|WP_132130247.1\|2617539_2621295_+\|hypothetical-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	6.48119e-81
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	3.59763e-17
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.35947e-10

>NZ_CP042432.1|WP_132130255.1|2634070_2634418_+|CRISPR-associated-endonuclease-Cas2
MSKSYYNRFNQYRILWVFVSFDLPTETKTDRKNYAVFRKNLKQDGFSMLQFSIYARHCNSRENAEVHIKRVKSFLPKKGEVILFTLTDKQFGMMEFFRGKSPGEKPETPQQLELF
>NZ_CP042432.1|WP_132130254.1|2633171_2634074_+|type-II-CRISPR-associated-endonuclease-Cas1
MIKRTLYFGNPVRLRLQQNQLVVEYSDEEQENKSVPVEDIGMVLIDHQQVSVTHGIINTLIEHNAAVLWCDNRHMPNGLVLPMSAGHIFTKKLRSQLDASEPLKKQLWKQTIQAKIRNQAGVVEWIGKDAQALRKMASRVWSGDPENIEGQASFVYWKLLFTGDSAFRRHRYGSPPNHMLNYAYAILRAIVARSLVASGCLPAVGIFHRNQYNAFCLADDIMEPYRPVVDRLVLQVLMDHQGDISEELTPELKQELLKVPVLDVVIEKQNSPLMVGMQRTTSSLMKCFEGDSRKINYPEM
>NZ_CP042432.1|WP_132130253.1|2628621_2633175_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKKLGLDLGSNSVGWALVEQDFKSKDGRILGMGSRIIPMSQDILGDFDKGNSVSQTAERTGYRATRRLRERYLLRRERLHRVLYVLGFLPEHYAKQIDFERRLGKFIKEAEPKLAYKVVEDKIKGKNEYEFVFIESFNEMLSDFREHQPQILLSEDGESRLVPYDWTIYYLRKKALTKKIKKEELAWILLNFNQKRGYYQLRGEEEEGNPNKMVEFYSLKVVDVNADEGQKGSSEIWYSLTLENGWVYRRSSKTPLSNWKGKVRDFIVTTDLNDDGTVKTDKESNEKRSFRAPGEDDWTLLKKKTERDIEQSDKTVGTYIYDTLLQNPKQKIKGKLVRTIERKFYKNELRRILQKQKEFHPELRNGDIYNDCVRELYRNNDAHRLLLSKKDFVHLLVDDIIFYQRPLRSQKLSIGNCTLEYRKYKDASGVEHTKYLKAIPKSHPYYQEFRLWQWLCNLSIYKREDDTNVTLKFLTNTSDYAKLFDFLNNRKEVDQKSLLKYFKLNEKTHRWNFVEDKKYPCNDTGYEIRRRFAKIETLPEGFLNPDIEKKIWHIIYSVTDKKEYEKALKSFANKYQVDEIQFVDAFRKVPPFKREYGAYSEKAIKKLLPLMRLGKYWCWDAIDKCSRERIEKIITGEYDENIDDRIREKARHFRDESDFQGLQHWLAQYVAYGRAAITDKWNSVDDLEQYLEDFKLHSLRNPIVEQLIMETLRVVKDIWIKYGNGVKDFFDEIHIELGREMKNTKDERKRIANQIAENENTNLRIKAILAEMVKYTEMENVRPYSPMQQEILKVYEDGVLNSDIEIDEDILKISKMAQPSSADLRKYKLWLEQRYRSPYTGAIIPLNKLFTPEYEIEHIIPQSRYFDDSFSNKVICEAAVNTLKDNQLGYEFVRHHHGEKVQIGHKTVQVFEITEYEDFIKRHYAKSRSKRNKLLMEDIPEDMVKRQMNDTRYISKFISSVLSNLVRAEANDDGINSKNLIPVNGKITNQLKQDWGLNDVWNELILLRFERMNQLTNSSNFTAWSKNHQKYLPTVPLEFSKGFSKKRIDHRHHSMDALVIACTTRDHVNLLNNKYAKSKERFDLSRKLRLFERVNYVDPRTGRRVEREVPKDFIKPWINFTSEAKTAMENIVVSFKQNLRVINKATNRYEKWVERDGVKVKEVRAQKGVNWAIRKPLHKDTVAGLVLLRRRKIVSLNAALETVNEIADRELRKEIQSMQLKGLDRKQITKYFKDIKYQWRGQDISRLEIFYWDNDNVASRVSLNDTFDEKRIGTITDTGIQKILLNHLDSCKGRLDARGKDIPAPLIAFSPEGIEEMNKNIVSLNNGRPHQPILKVRTYEPKGNKFYVGQTGNKRAKYVEAAKGTNLFFAIYQDQVGKRKYETIPLNIVIERQKQGLGSVPSENEQGDKLLFYLSPNDLVYVPSEEEKGDADNADFGDLSTPQLYNIYKVVSFTGYQIFFVKHDVAAPIVNKGEFSPLNKMERAWDGRMIKEHCIKLKVDRLGVISRFNAYIDITV
>NZ_CP042432.1|WP_132130252.1|2627244_2628291_+|restriction-endonuclease
MDFKDSIMQFAGRVEKLLPQIQTEEATKNALIMPFIQLLGYDVFNPFEVNPEFIADLGIKKGEKVDYAIIRDGQPVILVECKHHADSLDPHNSQLFRYFHTTDAKFGLLSNGLHYRFYTDLIKPNKMDEKPFFEFKINEIRDNEIQELKKFHKSYFNLENIANTASELKFLNEVKMLLNKELSSPTEDFVRFFAKQTYPTIVTAKVLEQFTSITKRAFNQILNDLINERLKTALNKENESEAALIKPETKDTLKAETTQDEIDGYLIIKSILRAKVDVQRVVMRDNQTYCAILLDDNNRKPICRLYFNGKKKQLALVGANKKEAKYEIASLDDIYQYSEELLKTAEVY
>NZ_CP042432.1|WP_132130251.1|2626633_2626993_-|DUF4260-domain-containing-protein
MNLLLKLEEIALFGFSIYLFAQTSFAWWWYPLLLLAPDISMLGYVRGPKTGAWVYNFFHHKALGAVLICVGWHFSREWVELSGIILLGHACMDRIAGYGLKYPDDFKHTSLGWLGAGRN
>NZ_CP042432.1|WP_132130250.1|2625296_2626658_-|MATE-family-efflux-transporter
MAGRWAKLENYRVIVRLAIPIILANASVPLLGLADTAAIGRTATARELGAIALGALVFSFVYWSFGFLRMGTTGFIAQAAGARDDQEARLALTRALLLGLGIGVVLVLFQSGICWAALRLLSASDEVSELVKRYFFIRIWGAPATLATFALLGALIGLGHTRKLLITQLFLNGVNVCLNLFFVFELKMGVEGIALGTLIAEWAAFGLALWLVLRSLHFNLFRFLRKSRADVLRKGPLLGMLKTNSDIMIRTLALLGGFAWFTNQGAKFGDATLAANHVLLQFVSLSAFFLDGFAYVVEMLTGRALGAKDRSRFIRDVKNATQLAGGTALLLALMVWTFGRPAISFLTRDAGVQEIAGQHLSYAAIYIAISFFAFQLDGVFIGAIRSREMRNASIASLLLFIGLEIVLTSWTHNNGLWLAFIAYVFIRGITLYLYLPRLMESFRKPSENTISSS
>NZ_CP042432.1|WP_132130249.1|2622040_2625313_+|c-type-cytochrome
MRLLFLAICCLPCWGYGQQLSGRTGALSPEEELAGFKLPEGFVIELVASERDGVVKPIDLAFDDAGRLWTQTARMYPLDPVTDIQWEQLLELMNDREKQESHPAFRRVLDLYQGKTKGDDKILVISGLYGEEKREVAVWADGLANPMSILPYKNGAYVAQGSELFFLDDTNQDGLADKRLPLLTGFGFTDSHTMTHLLTRGPGGWIYFSHGALNKGEVSSLTGNARQNVDYSKIGRFSLDAARLELVTAGLNNIWGLQLRGKGQWYGSEANDLGYSVAPMDPGTSFPGIGNERLRPYQPFMPALHEFRVGGTGLSGLAFAEDASGSFPAEWKDVAFLANPITSTINAVRIVRHADGSVSAEHLPDLLTSKDDWFRPVNLKFGPDGCLYIADWYNKIISHNEVPTSHPERDKTHGRIWRIRHVSQAPRPIPNLYEAKARQLITSLQSPSLWEKRAAWHQLAEREVKPATVGSLQDLLADNSRDEITRIHALWSLEALNGYDAALWRSLLEPGTAADRQGEDPDRKGGTPDLKSEVTDRQEGTSVQQRRTPDQQGGTPERSGKAPDPREGAADDLRREAIRSLASFQLSPAEIAELLKGPAEDPNPMIRSQVLRTIAEIDSANEDLLAILVRACRPELPGKGLGGPYERRFERYLARKALEQYPEALEAFLKNVPAGIPVENILWAVQSLPQKQKEAAFLEFWPQAQLRTIDESTFVSIAGMLGNQAIYDAVRPLMEAPGNAADIVRFAIANQSQVQSPEMASLLQQPVSNLLQENDPEGIKLALDAANRFKIDLPAETVAALFAGQPSEQTTELIINALEARPGANEAVFSRIVKDDQFSFALRSTALHHLAKANQQSAFSVLKSWLPGLDTTQAGKLAETLSGSPQGAALLVSVYEKKLLPARAFSLSTAERIREAQPESSGATRLLAYVKEQQSARRQQVHSKMERFLAIATNNKGNPVKGAALFQTCLMCHQVGSQGVNLGPALDGSANRDSEALLTAILSPDAAVESGYAAYRITKKDGTSYQGLLVEKNDRGATIAFMGGSTVFIQAAEIKSQGFLPGRSFMPKGLIESYSDEQVADLLAYIRSLK
>NZ_CP042432.1|WP_132130248.1|2621399_2622041_+|DUF1080-domain-containing-protein
MKVTRFLLLAVCSLCVAQDRLFAQSTSVSLFDGRTLNGWEVVDPADSKYWKVSDSVITGGDGVTAIPKNTYLRTVKEYEDFEFRCLFRLTGDESTGMINSGIQYRSTDSGTDMIGYQADIGNGYWGDIYDEHRRGKLVGGDLAALRFLLKENGWNSYIVRVKGDLHELYINGIKACEYVEKDPDVPRKGVIAIQLHGGGAAKIELRNPTITEL
>NZ_CP042432.1|WP_132130247.1|2617539_2621295_+|hypothetical-protein
MNIKNITAAALLCCISAICQGQRLRLWYEEPARQWEETLPLGNGRLGMMPGGGIAEETIVLNEISLWSGGPQDANNYEARKVLPKIRSLIAAGRNDEAQELINKEFICRGEGSGHGNGANVPFGCYQVLGELHLKFDHGNTDSLPAQNYQRELSLDSAIASCRYRLNGVNYRREYFTAFGGDVAVVRLTADKPGSLNLSVGISRPERAVVTVEGTTLKLSGQLNNGTDGKGMQFLSKIAARLRGGTLSTGKDVLHIKGATEVVLIISAATNFREPAFDEKADSLLRAAMKKPYEVLKQEHITRYRELFTRVSLDLGGKQEADKRSTPERLADFYKDPAADKGLAVLFFQFGRYLTISSTREGLLPPNLQGLWANQVQTPWNGDYHLDVNVQMNHWPVEVCNLSELNLPLAALVKGMVKPGERTAKAYYDAEGWVAHVIANIWGYTAPGEEASWGATTAGSGWLCNNLWEHYAFSGDKQYLECIYPILKGAALFYNSVLVRDPETGWLVTSPSVSPENSFYLPNGNRASICMGPTMDNQIIRELFTNMIRASELLGKDEEFRKVLSQKLEEIPPAGVVGKDGRLMEWLEEYKETDPQHRHISHLYGLYPASLITPEGTPELAEACRKTLEVRGDDGPGWTIAYKMLFWARLHDGNKAYQLFTQLMRPTLKTDMNYGAGGGVYPNLLSAGPPFQIDGNFGGTAGIAEMLIQSHAGYIELLPALPSAWKASGSVKGLKARGNYTVDFSWKEGKVIKYRVSSPLSGEGTGRKVQVKINGRLQEVTAEVLPETSRTAPGSEGKEGTEGRDQIPQQVRLRNEDYIQRNGGLQHVFRRIKKEGKATVAFLGGSITHMKGWRDLVCEQLRKDYPEVEFTFVEAGIPSLGSLPHAFRLQRDVLDKGAPDLLFLESAVNDETNGTPVRTQVRALEGIIRHTREQHPRAGIVLMAFADPGKMENYRAGKVPAEVRVHETVARHYQLPFIDLAKEITDRIDAGEFTWEDDFKDLHPSPFGQQKYFETIYTLLREEMKGGDQPEEALMPATSTPATSTPATATPATATPVTATPVTATPVTATPVTATPVTATPETAMQVPAITMASMPAAIDPFNYSKGHYLDVRRASRLKGFKVIENWTPAASGHPGKTVAAAGTREGFTNVPVLEGTGPGARFRLEFSGPVIGIGLVSGPDAGILKYRIDGKKYEPVDLYTQWSRQLHLPWYLLLADELGPGKHLLEVRISSRHHPASEGRAARLVCFLEN
>NZ_CP042432.1|WP_132130246.1|2616232_2617528_+|hypothetical-protein
MNVCIKSFLVLSLLLPAAELSAQNAPESAGSEKDMNRLMDEVKNKAEDLVKSGFTAGDGYGEVWIRDFNTFIEVACQVNDRELIRRHLLTFFRFQQEDGQIVDGYIPAGKASAGYEYIYSRLAPEYAGHKNTVETDQESSLVQALARYVRATGDEEILEEEIGGINVETRLEMALDFLFSERFNQEYGLIWGATTADWGDVQPEHPWGVELDSNSHLAIDIYDNAMLLIALQDFLEIALPEGNADAKWLNRKKALEKNIRKHLWDRSRGQFRPHIYLDGSPFPATFDEEAIYYHGGTAVAIEAGLLSRKEVKEAYARMQQNVRESGAASIGLTLYPVYPEGFFLNKSMGPYSYQNGGDWTWFGARMVTQLARYGFLSEAKAALRPMLERVVDNDGFYEWYSRENQPRGSGSFRGSAGVLWTAIKALESKAE
>NZ_CP042432.1|WP_132130815.1|2638298_2639876_+|IS21-family-transposase
MAGKPRPMSQVKQLIRLHLQGNGKKTIARELGISKNTVKQYLEKAAADPLSIKELLELDDPVLEGRFHAGNPAYKDLRFEDLKRRLPYLEKELEKVGVNKMLLWEEYKQAYPAGYGRTQFFFHFAQLSRARKPSAVLTHKPGDKLYIDFSGKKVHYTDRETGEMIVCELFVACLPFSDYAFCIAVPSQRLNDFIYALIRCLEALGGAAQALVPDNMKTAVTRADRYEPTINQTLEDLANHYQMTVVPARPRKPKDKSLAENQVKLIYTRVLAKLRNRQFFDLDSLNTAITEKIREHNQTRRQQKPYTREEEFLAAEKDQLTPLPDKRFELKYYAELKVAQNGHVYLGRDKHYYSVPYTYIGSKVKVIYTRMLVRIYAQGKQIALHQRNYAPGKYTSVKEHLCSQHQHYHNRSPAYYLDRARHTCRELYDLLEALFGQNRYPEQLYNTCDGLFSLARRSDPGRFARACQIAAEHRVYSYKFVQSILENNMTELEQDRPMDHPLPGGSNVRGKDYYQQLTLTLKTPS
>NZ_CP042432.1|WP_132130814.1|2639877_2640597_+|ATP-binding-protein
MQELLSQLKTLRLSGMSRSLEAMTATRQHQELTLIEGLALLLQAEEEDRDHKRFDRLIKNARFRYQASMEELHIDAARGIDKTLVTELASNNYVSKGMPVLVEGATGTGKSFLISALGHQACAGGYKVAYYNLQKLLLRIKLTRLDGSIYKFLEKLSRTDLLILDDFGLAHLDQQQRLDLMEIIEDRHGKTATVIASQLPIASWYDVIGDDVIADGILDRLVHSAYKIQLKGDSLRKKR
>NZ_CP042432.1|WP_132130828.1|2642579_2643395_-|IS3-family-transposase
MITPSHRLSVRRQCELLELHRSGIYYTPVGEGEKNLALMRRMDERHLQYPTEGVLQLQDYFRDEGLQVNHKRIRRLMRKMGIRAQYPRRILTKLGKAEYIRPYLLRNLKIERPNQVWAVDITYIPMKKGFMYLAAIIDLHSRFVVAWSLSNSMTSEWVCSLVKEAVKRHGKPEIVNSDQGSQFTCREWISLLPQLGIKISMDGKGRAIDNVFIERLWRTVKYEYVYLNPALDGWELEQGLRAFFHRYNFYKSHQGIGRRKPASLYLTGKAA
>NZ_CP042432.1|WP_132130829.1|2643409_2643691_-|transposase
MKGKRRKFSSAFKAKVALEALKEKETLAELAQRFEVHAVMISKWKQEFLEKSAHVFDKEADQEEQVDPDRLYAKIGQLELENDFLKKSLKKLH
>NZ_CP042432.1|WP_132130799.1|2646022_2647366_+|hypothetical-protein
MQLAYFKKVLLFALTGLLSAVADGHGLQGLRGSHTLTESSLTTTFREPIANDTNHLKIVYFGSSVPAGQGATNHKGYTSLFSDILKNRASEGGNVWETANISIGGDNTIRVLKRYETDLLPQKGDYVVFALALGNEGIHERGQPVFDQFERNMKVLIKKARADGYVPVVTNNYTRNDYNEKDYRFIKQMNILIHGWDVPSINLLGAIDDLSGHWVDGFWDDGFHPNDAGHAEMSYTIVPSLFEALESGKPMPKKVEGSYIRLTKRRSEGKYLTFKPEHIVHPFTTAISFKTSGPGVLLRMEDVDGTGVVSVNDKGRLVYSSAKSGVITGTGKVDDGQWHKVIVSHYYAKGLTMLYCDSTLQGTVEERLVTTGVKIGGAGIPKKLAYKDWLFYRSGMNQDEISCLAKDALLKSSLELYAPLDGKGVSVSDPLVNLAQSMNVIREVSRR
>NZ_CP042432.1|WP_132130800.1|2647352_2648123_-|type-I-methionyl-aminopeptidase
MSITKESELLGMQKASEAVACTLKEMVNHARPGMSTKELDNFGAKVLSGFGARSAPYLAYGFPGWTCISVGDEFCHGIPRRKRILKEGDLVNIDVSAELDGFWADNGGSFVLGEDINQHQKLVDASKEILHKAISHIKGGTKIADIGHLMETEARKRGYKVIKNLGGHGIGRSLHEAPEELLNYRNCLDQRRFKKNSVVAIETFISTSSTYAVERNDGWTMVGNKGGHMAQHEHTIVVTDGKPMILTEMNGIFNAC
>NZ_CP042432.1|WP_132130801.1|2648333_2650730_+|FtsX-like-permease-family-protein
MLRNYFKIALRNLWKHRVFSFINITGLAVGMTACFLIFLYVSFESSYDSFHQKGDRIYRLVSDLKIPTGRNSFGTVPWPVGPAIKNDFPEVESFVRMLSEDLVLTKGNVKFEEANVLYADSAFFQVFDFKLLNGNFRTALKDPFSIVLSRRAAKKYFGNEDPLGQTLTLPRNDTVLTASVTGIMENMPENSQIQADILVSASTLTQFLFPWLDEQWGGIGCSTYLLLKPGANAGALKAKFPAFLDRKAGEQAEARQSERSLQLEPLKEVYLHSRYAGPGMEMGNIQNIRIFSLVAVLIMLIACFNFINLTTARAAERAREVGVRKAVGAVKKHLVLQFIVESVLLCLMAFVLTLILSMLLIPAFNHLAGKTITPGLFASGGVILIVFLAAIGVGLLAGLYPALVLSSFRPVGVLKGRFVANTKGILFRKGMVVAQFTISLMLIIATIVVYRQLHYMRSQDLGFRKDQMMVIKTYSNPAIEAFNQSIERLSGVNSTTFSSSAPGDRNPRANSEIENTQGDLQPLDLDAYFVDFDYMHQYEMEMAAGRPFSRNFGTDSAQALILNEAAVRLLGYTSPEQIIGKRFRQWDKNGKVIGVVKDFHVRSLQDKITPLSIGIDPTLNRFLLSVDVRGANLSATITAIEKEWQKFIPDYPFSYEFLDAAFDQQYRSEERFGNIFSYFTMLAIFISCLGLLGLASYTALQRTKEIGIRKVMGASVASILALLSRDFVKLIAISILIAVPVAWYAMSNWLEGFAYRVNVEWWVLSLASLLLILIALLTISFQSVKAALMNPLKSLKSE
>NZ_CP042432.1|WP_147698315.1|2650864_2651626_-|ATP-binding-protein
MESVKQEIKQLCEQFRLGALYPALDQAVQAAEKNNMGYATFTLQLLKAEAAHRTQRDELKRLKTAGLPKGVDLDHFDTSVDIGFPPKRMGQLRELNWVDQLFNIVLMGPSGVGKTRIASGLCLDAVRAGYSAYFRTMQDIVHTLQTKDAVPSQNTEYRRLMKANLIVIDDIMLFPLNKETAVAFFNFINQIYESASIIITTNKAPAEWAKMLDDEVIATALLDRMLYRCEIIKLSGDSYRMKNRKSFFDNSDN
>NZ_CP042432.1|WP_147698316.1|2651706_2652288_-|hypothetical-protein
MRRDNTISWKSNLYSVPLGTYKGPGTTVTIKPSAEGITVLGVQGNLLCVHRISPLKGQKIILTDHKRDKSTAIAEMMESFAAMMPDHDAALAWIKIVKDSKPRYIRDQVQSLVETVSTLELQVTAATLEYCVAHGINGAADFKAVSAKLQGQSKKRETKVIRMNPLGGGRIAGADIQPDRSDIADYDDLLEKF
>NZ_CP042432.1|WP_147698317.1|2652203_2653262_-|IS21-family-transposase
MNYYLSKIMLYHHIHKMSREGHSISRISMELGLNWRTVKRMLSMDERTFTQELERGRTREKVLDAYEGFVREKLSLHPETPAAQLHDWLKEYHAGFPRVSQKTVFNFVQYVRDKHNIPRTDPVREYMAVEELPYGQQGQADFGFYNMRTTTGKIKKVQFFTFVLSRSRHKYVIFSDSPFTCELLVYAHERAFEFTGGVPREVVYDQDRLMMVSENLGDIILTGAFRSYVRQRGINTWFCRKADPESKGKVENVVKYVKRNFLYNRYYRDLETLNDQTVAWLHRTANNLPHGTTGKVPREELDTEQAFLSPGTRWPYHRRNIPCMPCGATIPSAGRATCTVSRWVPTRGPELP

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Crispr_ID: NZ_CP042432_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_14

2640729-2642371

TypeII

Consensus_repeat	Method
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	PILER-CR

21 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP042432_14

>merge|NZ_CP042432|14|2640729-2642371|PILER-CR,CRISPRCasFinder,PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCTGGACAAATTGGCGGACGAAGACAAAGAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGAAGGCGAGTAAGCTTTCCAGGCCATTCAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGCAGGAAATAGGCGCCGGGATTAACTTCTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGCGGTTTTTAAGTGCTTCCGCCGCCTTGTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAAAACTACGTTTACCGGGGCGTATGCTTATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGATAATAGTTTGGAAGATGAAGGGCAAAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGTAATTAGCGTCGACATGTTCTTCGCTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGGATATGCGACGTTGGAAGAGTTAGGGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAAAAAGTGTGGGAATCCCTTCAAAAGACGGAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACATACCCCGACAAATCGGGAGGAACTACATCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGCTTCCGGCAGTAGTAACTACATGCCCACACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTTTCGGCTTTGCCTCCGGGGCGGTTGTGCTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGATGCGCCGGCAACGACCCGGCTTTGTGAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACATTGATAATTATCTTAAAGAGTATGAGTAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACACGTGAGTAAATATCGGGAAGCTGATGACTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCAATCCTACCCGATCTCCTTTGTTGAAAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGGATGTACCATATATACAGATTTCCTTGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGGATCCCGCTCCAAGGCAGAGTAGTATTTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGAGATAAGATCAAGCAGGGAGATATTGCAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGTGATCGCCTATAAGCACTACTTCCTAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCGGTATCGCCTGCCCTTGTTTAATTCTAGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC

>NZ_CP042432|14|2|2640729-2642371|PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CTGGACAAATTGGCGGACGAAGACAAAGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGGCGAGTAAGCTTTCCAGGCCATTCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCAGGAAATAGGCGCCGGGATTAACTTCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCGGTTTTTAAGTGCTTCCGCCGCCTTGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAACTACGTTTACCGGGGCGTATGCTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGATAATAGTTTGGAAGATGAAGGGCAAAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGTAATTAGCGTCGACATGTTCTTCGCTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGGATATGCGACGTTGGAAGAGTTAGGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAAAGTGTGGGAATCCCTTCAAAAGACGGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATACCCCGACAAATCGGGAGGAACTACATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCTTCCGGCAGTAGTAACTACATGCCCAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTTCGGCTTTGCCTCCGGGGCGGTTGTGCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATGCGCCGGCAACGACCCGGCTTTGTGAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATTGATAATTATCTTAAAGAGTATGAGTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACGTGAGTAAATATCGGGAAGCTGATGACT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCAATCCTACCCGATCTCCTTTGTTGAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGGATGTACCATATATACAGATTTCCTTGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGGATCCCGCTCCAAGGCAGAGTAGTATTTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGAGATAAGATCAAGCAGGGAGATATTGCAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGTGATCGCCTATAAGCACTACTTCCTAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCGGTATCGCCTGCCCTTGTTTAATTCTAG
	GGGATCCCGCTCCAAGGCAGAGTAGTATTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGAGATAAGATCAAGCAGGGAGATATTGCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGTGATCGCCTATAAGCACTACTTCCTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGTATCGCCTGCCCTTGTTTAATTCTAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC

>NZ_CP042432|14|14|2640729-2642371|CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CTGGACAAATTGGCGGACGAAGACAAAGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGGCGAGTAAGCTTTCCAGGCCATTCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCAGGAAATAGGCGCCGGGATTAACTTCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCGGTTTTTAAGTGCTTCCGCCGCCTTGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAACTACGTTTACCGGGGCGTATGCTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGATAATAGTTTGGAAGATGAAGGGCAAAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGTAATTAGCGTCGACATGTTCTTCGCTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGGATATGCGACGTTGGAAGAGTTAGGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAAAGTGTGGGAATCCCTTCAAAAGACGGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATACCCCGACAAATCGGGAGGAACTACATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCTTCCGGCAGTAGTAACTACATGCCCAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTTCGGCTTTGCCTCCGGGGCGGTTGTGCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATGCGCCGGCAACGACCCGGCTTTGTGAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATTGATAATTATCTTAAAGAGTATGAGTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACGTGAGTAAATATCGGGAAGCTGATGACT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCAATCCTACCCGATCTCCTTTGTTGAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGGATGTACCATATATACAGATTTCCTTGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGGATCCCGCTCCAAGGCAGAGTAGTATTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGAGATAAGATCAAGCAGGGAGATATTGCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGTGATCGCCTATAAGCACTACTTCCTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGTATCGCCTGCCCTTGTTTAATTCTAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC

>NZ_CP042432|14|3|2642022-2642371|PILER-CR
	CTGGACAAATTGGCGGACGAAGACAAAGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGAAGGCGAGTAAGCTTTCCAGGCCATTCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCAGGAAATAGGCGCCGGGATTAACTTCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCGGTTTTTAAGTGCTTCCGCCGCCTTGT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAACTACGTTTACCGGGGCGTATGCTTAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGATAATAGTTTGGAAGATGAAGGGCAAAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGTAATTAGCGTCGACATGTTCTTCGCTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGGATATGCGACGTTGGAAGAGTTAGGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AAAAAGTGTGGGAATCCCTTCAAAAGACGGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATACCCCGACAAATCGGGAGGAACTACATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGCTTCCGGCAGTAGTAACTACATGCCCAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTTCGGCTTTGCCTCCGGGGCGGTTGTGCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GATGCGCCGGCAACGACCCGGCTTTGTGAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATTGATAATTATCTTAAAGAGTATGAGTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACGTGAGTAAATATCGGGAAGCTGATGACT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCAATCCTACCCGATCTCCTTTGTTGAAAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGGATGTACCATATATACAGATTTCCTTGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGGATCCCGCTCCAAGGCAGAGTAGTATTTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGAGATAAGATCAAGCAGGGAGATATTGCAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGTGATCGCCTATAAGCACTACTTCCTAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCGGTATCGCCTGCCCTTGTTTAATTCTAG
	GGGATCCCGCTCCAAGGCAGAGTAGTATTT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGAGATAAGATCAAGCAGGGAGATATTGCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGTGATCGCCTATAAGCACTACTTCCTAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCGGTATCGCCTGCCCTTGTTTAATTCTAG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_147698316.1\|2651706_2652288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP042432.1\|WP_132130248.1\|2621399_2622041_+\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042432.1\|WP_158640608.1\|2653817_2654303_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP042432.1\|WP_132130688.1\|2654277_2655009_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	unknown	unknown	gnl\|CDD\|379455
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP042432.1\|WP_132130249.1\|2622040_2625313_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|227091

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.40249e-104
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	1.22925e-71
NZ_CP042432.1\|WP_132130248.1\|2621399_2622041_+\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	7.50162e-35
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.35947e-10
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.28315e-49
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	4.16357e-132
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.02586e-23
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.97769e-99
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	9.92732e-38
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.14756e-52
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	8.68491e-51
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.03329e-21
NZ_CP042432.1\|WP_158640608.1\|2653817_2654303_+\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	2.80316e-16
NZ_CP042432.1\|WP_132130688.1\|2654277_2655009_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.79088e-15
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	gnl\|CDD\|379455	pfam14079, DUF4260, Domain of unknown function (DUF4260). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 126 amino acids in length. There is a conserved GLK sequence motif.	6.16401e-48
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000413076
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	3.59763e-17
NZ_CP042432.1\|WP_132130249.1\|2622040_2625313_+\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	1.95387e-41
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	gnl\|CDD\|227091	COG4748, COG4748, Uncharacterized conserved protein [Function unknown].	6.92001e-127

>NZ_CP042432.1|WP_132130814.1|2639877_2640597_+|ATP-binding-protein
MQELLSQLKTLRLSGMSRSLEAMTATRQHQELTLIEGLALLLQAEEEDRDHKRFDRLIKNARFRYQASMEELHIDAARGIDKTLVTELASNNYVSKGMPVLVEGATGTGKSFLISALGHQACAGGYKVAYYNLQKLLLRIKLTRLDGSIYKFLEKLSRTDLLILDDFGLAHLDQQQRLDLMEIIEDRHGKTATVIASQLPIASWYDVIGDDVIADGILDRLVHSAYKIQLKGDSLRKKR
>NZ_CP042432.1|WP_132130815.1|2638298_2639876_+|IS21-family-transposase
MAGKPRPMSQVKQLIRLHLQGNGKKTIARELGISKNTVKQYLEKAAADPLSIKELLELDDPVLEGRFHAGNPAYKDLRFEDLKRRLPYLEKELEKVGVNKMLLWEEYKQAYPAGYGRTQFFFHFAQLSRARKPSAVLTHKPGDKLYIDFSGKKVHYTDRETGEMIVCELFVACLPFSDYAFCIAVPSQRLNDFIYALIRCLEALGGAAQALVPDNMKTAVTRADRYEPTINQTLEDLANHYQMTVVPARPRKPKDKSLAENQVKLIYTRVLAKLRNRQFFDLDSLNTAITEKIREHNQTRRQQKPYTREEEFLAAEKDQLTPLPDKRFELKYYAELKVAQNGHVYLGRDKHYYSVPYTYIGSKVKVIYTRMLVRIYAQGKQIALHQRNYAPGKYTSVKEHLCSQHQHYHNRSPAYYLDRARHTCRELYDLLEALFGQNRYPEQLYNTCDGLFSLARRSDPGRFARACQIAAEHRVYSYKFVQSILENNMTELEQDRPMDHPLPGGSNVRGKDYYQQLTLTLKTPS
>NZ_CP042432.1|WP_132130255.1|2634070_2634418_+|CRISPR-associated-endonuclease-Cas2
MSKSYYNRFNQYRILWVFVSFDLPTETKTDRKNYAVFRKNLKQDGFSMLQFSIYARHCNSRENAEVHIKRVKSFLPKKGEVILFTLTDKQFGMMEFFRGKSPGEKPETPQQLELF
>NZ_CP042432.1|WP_132130254.1|2633171_2634074_+|type-II-CRISPR-associated-endonuclease-Cas1
MIKRTLYFGNPVRLRLQQNQLVVEYSDEEQENKSVPVEDIGMVLIDHQQVSVTHGIINTLIEHNAAVLWCDNRHMPNGLVLPMSAGHIFTKKLRSQLDASEPLKKQLWKQTIQAKIRNQAGVVEWIGKDAQALRKMASRVWSGDPENIEGQASFVYWKLLFTGDSAFRRHRYGSPPNHMLNYAYAILRAIVARSLVASGCLPAVGIFHRNQYNAFCLADDIMEPYRPVVDRLVLQVLMDHQGDISEELTPELKQELLKVPVLDVVIEKQNSPLMVGMQRTTSSLMKCFEGDSRKINYPEM
>NZ_CP042432.1|WP_132130253.1|2628621_2633175_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKKLGLDLGSNSVGWALVEQDFKSKDGRILGMGSRIIPMSQDILGDFDKGNSVSQTAERTGYRATRRLRERYLLRRERLHRVLYVLGFLPEHYAKQIDFERRLGKFIKEAEPKLAYKVVEDKIKGKNEYEFVFIESFNEMLSDFREHQPQILLSEDGESRLVPYDWTIYYLRKKALTKKIKKEELAWILLNFNQKRGYYQLRGEEEEGNPNKMVEFYSLKVVDVNADEGQKGSSEIWYSLTLENGWVYRRSSKTPLSNWKGKVRDFIVTTDLNDDGTVKTDKESNEKRSFRAPGEDDWTLLKKKTERDIEQSDKTVGTYIYDTLLQNPKQKIKGKLVRTIERKFYKNELRRILQKQKEFHPELRNGDIYNDCVRELYRNNDAHRLLLSKKDFVHLLVDDIIFYQRPLRSQKLSIGNCTLEYRKYKDASGVEHTKYLKAIPKSHPYYQEFRLWQWLCNLSIYKREDDTNVTLKFLTNTSDYAKLFDFLNNRKEVDQKSLLKYFKLNEKTHRWNFVEDKKYPCNDTGYEIRRRFAKIETLPEGFLNPDIEKKIWHIIYSVTDKKEYEKALKSFANKYQVDEIQFVDAFRKVPPFKREYGAYSEKAIKKLLPLMRLGKYWCWDAIDKCSRERIEKIITGEYDENIDDRIREKARHFRDESDFQGLQHWLAQYVAYGRAAITDKWNSVDDLEQYLEDFKLHSLRNPIVEQLIMETLRVVKDIWIKYGNGVKDFFDEIHIELGREMKNTKDERKRIANQIAENENTNLRIKAILAEMVKYTEMENVRPYSPMQQEILKVYEDGVLNSDIEIDEDILKISKMAQPSSADLRKYKLWLEQRYRSPYTGAIIPLNKLFTPEYEIEHIIPQSRYFDDSFSNKVICEAAVNTLKDNQLGYEFVRHHHGEKVQIGHKTVQVFEITEYEDFIKRHYAKSRSKRNKLLMEDIPEDMVKRQMNDTRYISKFISSVLSNLVRAEANDDGINSKNLIPVNGKITNQLKQDWGLNDVWNELILLRFERMNQLTNSSNFTAWSKNHQKYLPTVPLEFSKGFSKKRIDHRHHSMDALVIACTTRDHVNLLNNKYAKSKERFDLSRKLRLFERVNYVDPRTGRRVEREVPKDFIKPWINFTSEAKTAMENIVVSFKQNLRVINKATNRYEKWVERDGVKVKEVRAQKGVNWAIRKPLHKDTVAGLVLLRRRKIVSLNAALETVNEIADRELRKEIQSMQLKGLDRKQITKYFKDIKYQWRGQDISRLEIFYWDNDNVASRVSLNDTFDEKRIGTITDTGIQKILLNHLDSCKGRLDARGKDIPAPLIAFSPEGIEEMNKNIVSLNNGRPHQPILKVRTYEPKGNKFYVGQTGNKRAKYVEAAKGTNLFFAIYQDQVGKRKYETIPLNIVIERQKQGLGSVPSENEQGDKLLFYLSPNDLVYVPSEEEKGDADNADFGDLSTPQLYNIYKVVSFTGYQIFFVKHDVAAPIVNKGEFSPLNKMERAWDGRMIKEHCIKLKVDRLGVISRFNAYIDITV
>NZ_CP042432.1|WP_132130252.1|2627244_2628291_+|restriction-endonuclease
MDFKDSIMQFAGRVEKLLPQIQTEEATKNALIMPFIQLLGYDVFNPFEVNPEFIADLGIKKGEKVDYAIIRDGQPVILVECKHHADSLDPHNSQLFRYFHTTDAKFGLLSNGLHYRFYTDLIKPNKMDEKPFFEFKINEIRDNEIQELKKFHKSYFNLENIANTASELKFLNEVKMLLNKELSSPTEDFVRFFAKQTYPTIVTAKVLEQFTSITKRAFNQILNDLINERLKTALNKENESEAALIKPETKDTLKAETTQDEIDGYLIIKSILRAKVDVQRVVMRDNQTYCAILLDDNNRKPICRLYFNGKKKQLALVGANKKEAKYEIASLDDIYQYSEELLKTAEVY
>NZ_CP042432.1|WP_132130251.1|2626633_2626993_-|DUF4260-domain-containing-protein
MNLLLKLEEIALFGFSIYLFAQTSFAWWWYPLLLLAPDISMLGYVRGPKTGAWVYNFFHHKALGAVLICVGWHFSREWVELSGIILLGHACMDRIAGYGLKYPDDFKHTSLGWLGAGRN
>NZ_CP042432.1|WP_132130250.1|2625296_2626658_-|MATE-family-efflux-transporter
MAGRWAKLENYRVIVRLAIPIILANASVPLLGLADTAAIGRTATARELGAIALGALVFSFVYWSFGFLRMGTTGFIAQAAGARDDQEARLALTRALLLGLGIGVVLVLFQSGICWAALRLLSASDEVSELVKRYFFIRIWGAPATLATFALLGALIGLGHTRKLLITQLFLNGVNVCLNLFFVFELKMGVEGIALGTLIAEWAAFGLALWLVLRSLHFNLFRFLRKSRADVLRKGPLLGMLKTNSDIMIRTLALLGGFAWFTNQGAKFGDATLAANHVLLQFVSLSAFFLDGFAYVVEMLTGRALGAKDRSRFIRDVKNATQLAGGTALLLALMVWTFGRPAISFLTRDAGVQEIAGQHLSYAAIYIAISFFAFQLDGVFIGAIRSREMRNASIASLLLFIGLEIVLTSWTHNNGLWLAFIAYVFIRGITLYLYLPRLMESFRKPSENTISSS
>NZ_CP042432.1|WP_132130249.1|2622040_2625313_+|c-type-cytochrome
MRLLFLAICCLPCWGYGQQLSGRTGALSPEEELAGFKLPEGFVIELVASERDGVVKPIDLAFDDAGRLWTQTARMYPLDPVTDIQWEQLLELMNDREKQESHPAFRRVLDLYQGKTKGDDKILVISGLYGEEKREVAVWADGLANPMSILPYKNGAYVAQGSELFFLDDTNQDGLADKRLPLLTGFGFTDSHTMTHLLTRGPGGWIYFSHGALNKGEVSSLTGNARQNVDYSKIGRFSLDAARLELVTAGLNNIWGLQLRGKGQWYGSEANDLGYSVAPMDPGTSFPGIGNERLRPYQPFMPALHEFRVGGTGLSGLAFAEDASGSFPAEWKDVAFLANPITSTINAVRIVRHADGSVSAEHLPDLLTSKDDWFRPVNLKFGPDGCLYIADWYNKIISHNEVPTSHPERDKTHGRIWRIRHVSQAPRPIPNLYEAKARQLITSLQSPSLWEKRAAWHQLAEREVKPATVGSLQDLLADNSRDEITRIHALWSLEALNGYDAALWRSLLEPGTAADRQGEDPDRKGGTPDLKSEVTDRQEGTSVQQRRTPDQQGGTPERSGKAPDPREGAADDLRREAIRSLASFQLSPAEIAELLKGPAEDPNPMIRSQVLRTIAEIDSANEDLLAILVRACRPELPGKGLGGPYERRFERYLARKALEQYPEALEAFLKNVPAGIPVENILWAVQSLPQKQKEAAFLEFWPQAQLRTIDESTFVSIAGMLGNQAIYDAVRPLMEAPGNAADIVRFAIANQSQVQSPEMASLLQQPVSNLLQENDPEGIKLALDAANRFKIDLPAETVAALFAGQPSEQTTELIINALEARPGANEAVFSRIVKDDQFSFALRSTALHHLAKANQQSAFSVLKSWLPGLDTTQAGKLAETLSGSPQGAALLVSVYEKKLLPARAFSLSTAERIREAQPESSGATRLLAYVKEQQSARRQQVHSKMERFLAIATNNKGNPVKGAALFQTCLMCHQVGSQGVNLGPALDGSANRDSEALLTAILSPDAAVESGYAAYRITKKDGTSYQGLLVEKNDRGATIAFMGGSTVFIQAAEIKSQGFLPGRSFMPKGLIESYSDEQVADLLAYIRSLK
>NZ_CP042432.1|WP_132130248.1|2621399_2622041_+|DUF1080-domain-containing-protein
MKVTRFLLLAVCSLCVAQDRLFAQSTSVSLFDGRTLNGWEVVDPADSKYWKVSDSVITGGDGVTAIPKNTYLRTVKEYEDFEFRCLFRLTGDESTGMINSGIQYRSTDSGTDMIGYQADIGNGYWGDIYDEHRRGKLVGGDLAALRFLLKENGWNSYIVRVKGDLHELYINGIKACEYVEKDPDVPRKGVIAIQLHGGGAAKIELRNPTITEL
>NZ_CP042432.1|WP_132130828.1|2642579_2643395_-|IS3-family-transposase
MITPSHRLSVRRQCELLELHRSGIYYTPVGEGEKNLALMRRMDERHLQYPTEGVLQLQDYFRDEGLQVNHKRIRRLMRKMGIRAQYPRRILTKLGKAEYIRPYLLRNLKIERPNQVWAVDITYIPMKKGFMYLAAIIDLHSRFVVAWSLSNSMTSEWVCSLVKEAVKRHGKPEIVNSDQGSQFTCREWISLLPQLGIKISMDGKGRAIDNVFIERLWRTVKYEYVYLNPALDGWELEQGLRAFFHRYNFYKSHQGIGRRKPASLYLTGKAA
>NZ_CP042432.1|WP_132130829.1|2643409_2643691_-|transposase
MKGKRRKFSSAFKAKVALEALKEKETLAELAQRFEVHAVMISKWKQEFLEKSAHVFDKEADQEEQVDPDRLYAKIGQLELENDFLKKSLKKLH
>NZ_CP042432.1|WP_132130799.1|2646022_2647366_+|hypothetical-protein
MQLAYFKKVLLFALTGLLSAVADGHGLQGLRGSHTLTESSLTTTFREPIANDTNHLKIVYFGSSVPAGQGATNHKGYTSLFSDILKNRASEGGNVWETANISIGGDNTIRVLKRYETDLLPQKGDYVVFALALGNEGIHERGQPVFDQFERNMKVLIKKARADGYVPVVTNNYTRNDYNEKDYRFIKQMNILIHGWDVPSINLLGAIDDLSGHWVDGFWDDGFHPNDAGHAEMSYTIVPSLFEALESGKPMPKKVEGSYIRLTKRRSEGKYLTFKPEHIVHPFTTAISFKTSGPGVLLRMEDVDGTGVVSVNDKGRLVYSSAKSGVITGTGKVDDGQWHKVIVSHYYAKGLTMLYCDSTLQGTVEERLVTTGVKIGGAGIPKKLAYKDWLFYRSGMNQDEISCLAKDALLKSSLELYAPLDGKGVSVSDPLVNLAQSMNVIREVSRR
>NZ_CP042432.1|WP_132130800.1|2647352_2648123_-|type-I-methionyl-aminopeptidase
MSITKESELLGMQKASEAVACTLKEMVNHARPGMSTKELDNFGAKVLSGFGARSAPYLAYGFPGWTCISVGDEFCHGIPRRKRILKEGDLVNIDVSAELDGFWADNGGSFVLGEDINQHQKLVDASKEILHKAISHIKGGTKIADIGHLMETEARKRGYKVIKNLGGHGIGRSLHEAPEELLNYRNCLDQRRFKKNSVVAIETFISTSSTYAVERNDGWTMVGNKGGHMAQHEHTIVVTDGKPMILTEMNGIFNAC
>NZ_CP042432.1|WP_132130801.1|2648333_2650730_+|FtsX-like-permease-family-protein
MLRNYFKIALRNLWKHRVFSFINITGLAVGMTACFLIFLYVSFESSYDSFHQKGDRIYRLVSDLKIPTGRNSFGTVPWPVGPAIKNDFPEVESFVRMLSEDLVLTKGNVKFEEANVLYADSAFFQVFDFKLLNGNFRTALKDPFSIVLSRRAAKKYFGNEDPLGQTLTLPRNDTVLTASVTGIMENMPENSQIQADILVSASTLTQFLFPWLDEQWGGIGCSTYLLLKPGANAGALKAKFPAFLDRKAGEQAEARQSERSLQLEPLKEVYLHSRYAGPGMEMGNIQNIRIFSLVAVLIMLIACFNFINLTTARAAERAREVGVRKAVGAVKKHLVLQFIVESVLLCLMAFVLTLILSMLLIPAFNHLAGKTITPGLFASGGVILIVFLAAIGVGLLAGLYPALVLSSFRPVGVLKGRFVANTKGILFRKGMVVAQFTISLMLIIATIVVYRQLHYMRSQDLGFRKDQMMVIKTYSNPAIEAFNQSIERLSGVNSTTFSSSAPGDRNPRANSEIENTQGDLQPLDLDAYFVDFDYMHQYEMEMAAGRPFSRNFGTDSAQALILNEAAVRLLGYTSPEQIIGKRFRQWDKNGKVIGVVKDFHVRSLQDKITPLSIGIDPTLNRFLLSVDVRGANLSATITAIEKEWQKFIPDYPFSYEFLDAAFDQQYRSEERFGNIFSYFTMLAIFISCLGLLGLASYTALQRTKEIGIRKVMGASVASILALLSRDFVKLIAISILIAVPVAWYAMSNWLEGFAYRVNVEWWVLSLASLLLILIALLTISFQSVKAALMNPLKSLKSE
>NZ_CP042432.1|WP_147698315.1|2650864_2651626_-|ATP-binding-protein
MESVKQEIKQLCEQFRLGALYPALDQAVQAAEKNNMGYATFTLQLLKAEAAHRTQRDELKRLKTAGLPKGVDLDHFDTSVDIGFPPKRMGQLRELNWVDQLFNIVLMGPSGVGKTRIASGLCLDAVRAGYSAYFRTMQDIVHTLQTKDAVPSQNTEYRRLMKANLIVIDDIMLFPLNKETAVAFFNFINQIYESASIIITTNKAPAEWAKMLDDEVIATALLDRMLYRCEIIKLSGDSYRMKNRKSFFDNSDN
>NZ_CP042432.1|WP_147698316.1|2651706_2652288_-|hypothetical-protein
MRRDNTISWKSNLYSVPLGTYKGPGTTVTIKPSAEGITVLGVQGNLLCVHRISPLKGQKIILTDHKRDKSTAIAEMMESFAAMMPDHDAALAWIKIVKDSKPRYIRDQVQSLVETVSTLELQVTAATLEYCVAHGINGAADFKAVSAKLQGQSKKRETKVIRMNPLGGGRIAGADIQPDRSDIADYDDLLEKF
>NZ_CP042432.1|WP_147698317.1|2652203_2653262_-|IS21-family-transposase
MNYYLSKIMLYHHIHKMSREGHSISRISMELGLNWRTVKRMLSMDERTFTQELERGRTREKVLDAYEGFVREKLSLHPETPAAQLHDWLKEYHAGFPRVSQKTVFNFVQYVRDKHNIPRTDPVREYMAVEELPYGQQGQADFGFYNMRTTTGKIKKVQFFTFVLSRSRHKYVIFSDSPFTCELLVYAHERAFEFTGGVPREVVYDQDRLMMVSENLGDIILTGAFRSYVRQRGINTWFCRKADPESKGKVENVVKYVKRNFLYNRYYRDLETLNDQTVAWLHRTANNLPHGTTGKVPREELDTEQAFLSPGTRWPYHRRNIPCMPCGATIPSAGRATCTVSRWVPTRGPELP
>NZ_CP042432.1|WP_158640608.1|2653817_2654303_+|hypothetical-protein
MKELIWEIALFLRDKEESSTYCFFYRKEGTGAEADWFLASAKLNACSKGFPEEIVVVSYNLQLLGDQKNRIYRVLNNGDFFKKHFSKVAALTKREKEVVRLLAAGMNSSEIAGTLCVSMHTVQAHRKNIIKKLDIRNFAGLLKFAEVFDLMSPNEHECPVN
>NZ_CP042432.1|WP_132130688.1|2654277_2655009_+|response-regulator-transcription-factor
MSMNARLTDQEIADTNSRQTFSLAAKIHKGEFTIESVGDYLPGNVLVTDLSKPGTVYMNKRGCSHLKHSVEELQALGPAYFQQFFVPDEIGMVIRNYGKMYQRQDMTAGFNFVHRVKHPDEKFYKWHFASARLLFAPGKEHTDKIVLIVNEVHSAESITKKINSALDESDWMKKNFLKFCRLTRREKDIIALIVDGNSTADIADFFCISQLTVKTHRKNLLSKLEVNSFAELYKFALTYGLVR

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Crispr_ID: NZ_CP042432_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_15

2643764-2645774

TypeII

Consensus_repeat	Method
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CRISPRCasFinder

25 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP042432_15

>merge|NZ_CP042432|15|2643764-2645774|PILER-CR,CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGAGCAAAGTACGGCTCTTTAGTACAGTCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACACTAAATGGCAAACCCGGACTTAACTGGATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACACTCCCCAACGGGCGCAGACACTTCAATATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGAGATAAGATCAAGCAGGGAGATATTGCAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTAGATTTTTAAATGAAGTCGCTATCTGATCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCAAGATCGGAGGGCTTTGGGCTTTCTGAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTGGTGCTTGGGATTTCCGCTATTACCACGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCATCCGTCAACGATTCCCTAAGCCCTGGAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCAGGGGCAGTACGTTGTTTTTGTGGATGATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTGGCGAAGGTGTGTACAATAGGCTGGCACACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTTGCCGATTACGGCGCAGGCGAATACAGGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTACCCATTGTTTGCGAAATTCATGGGTTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTACCCATTGTTTGCGAAATTCATGGGTTGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTCAAGGGTATATGAAATGTAATTCCCCGCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGGCGGGGTTAACCATACGTCCGTTTCCATCACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACATGGAACCACTGTACTCTACTACTATACCTACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACATCTGGCCGGGCTGAACAGCGTTTGCCTACACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACAGGACGACCTGGGGGACGACAGCGTTGCCGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACGTAAGGCAATAGCTGAAACAAAATACCAGAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCTACGCAGGAAGGCATTGCGTATATAAATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCCTACGCAGGAAGGCATTGCGTATATAAATACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACATTTTCGGTTAAATCTCTGTTGGGGGGGGACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACCGGGAATGTCGCGAAGTGAGCCTCTTTAAAACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAACTCGTCAGATGGGATAATTACCTCTGAAATCACTGTGGTAAATCTCGTCATTCTGAAAATTGAAAGCAAATCACAACGAACTGAACAACATCAAGGATCACCGTGGTTTATCTCATGATTCCAAAATTTGAGAGCAATTCACAACTTTTGCAGGCGCTGAACCTTCAGATCGATGACTGTGGTAAATATCGTGATTCTGGAAATGGAGGCAAATCACAACG

>NZ_CP042432|15|4|2643764-2645630|PILER-CR
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGAGCAAAGTACGGCTCTTTAGTACAGTC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTAAATGGCAAACCCGGACTTAACTGGAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTCCCCAACGGGCGCAGACACTTCAATAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGAGATAAGATCAAGCAGGGAGATATTGCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAGATTTTTAAATGAAGTCGCTATCTGATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAGATCGGAGGGCTTTGGGCTTTCTGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGTGCTTGGGATTTCCGCTATTACCACG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCATCCGTCAACGATTCCCTAAGCCCTGGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAGGGGCAGTACGTTGTTTTTGTGGATGAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGGCGAAGGTGTGTACAATAGGCTGGCAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTGCCGATTACGGCGCAGGCGAATACAGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATTCATGGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATTCATGGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTCAAGGGTATATGAAATGTAATTCCCCGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCGGGGTTAACCATACGTCCGTTTCCATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATGGAACCACTGTACTCTACTACTATACCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATCTGGCCGGGCTGAACAGCGTTTGCCTAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGGACGACCTGGGGGACGACAGCGTTGCCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTAAGGCAATAGCTGAAACAAAATACCAGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCTACGCAGGAAGGCATTGCGTATATAAAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCTACGCAGGAAGGCATTGCGTATATAAAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATTTTCGGTTAAATCTCTGTTGGGGGGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGGGAATGTCGCGAAGTGAGCCTCTTTAAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCGTCAGATGGGATAATTACCTCTGAAATC
ACTGTGGTAAATCTCGTCATTCTGAAAATTGAAAGCAAATCACAAC

>NZ_CP042432|15|15|2643764-2645774|CRISPRCasFinder
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGAGCAAAGTACGGCTCTTTAGTACAGTC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTAAATGGCAAACCCGGACTTAACTGGAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ACTCCCCAACGGGCGCAGACACTTCAATAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGAGATAAGATCAAGCAGGGAGATATTGCA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TAGATTTTTAAATGAAGTCGCTATCTGATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAAGATCGGAGGGCTTTGGGCTTTCTGAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TGGTGCTTGGGATTTCCGCTATTACCACG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCATCCGTCAACGATTCCCTAAGCCCTGGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CAGGGGCAGTACGTTGTTTTTGTGGATGAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTGGCGAAGGTGTGTACAATAGGCTGGCAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TTGCCGATTACGGCGCAGGCGAATACAGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATTCATGGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TACCCATTGTTTGCGAAATTCATGGGTTGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTCAAGGGTATATGAAATGTAATTCCCCGC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GGCGGGGTTAACCATACGTCCGTTTCCATC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATGGAACCACTGTACTCTACTACTATACCT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATCTGGCCGGGCTGAACAGCGTTTGCCTAC
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	AGGACGACCTGGGGGACGACAGCGTTGCCG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	GTAAGGCAATAGCTGAAACAAAATACCAGA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCTACGCAGGAAGGCATTGCGTATATAAAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CCTACGCAGGAAGGCATTGCGTATATAAAT
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	ATTTTCGGTTAAATCTCTGTTGGGGGGGG
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	CGGGAATGTCGCGAAGTGAGCCTCTTTAAA
ACTGTGGTAAATCTCGTGATTCTGATAATTGAAAGCAAATCACAAC	TCGTCAGATGGGATAATTACCTCTGAAATC
ACTGTGGTAAATCTCGTCATTCTGAAAATTGAAAGCAAATCACAAC	GAACTGAACAACATCAAGGATCACCGTGGTTTATCTCATGATTCCAAAATTTGAGAGCAATTCACAACTTTTGCAGGCGCTGAACCTTCAGATCGATG
ACTGTGGTAAATATCGTGATTCTGGAAATGGAGGCAAATCACAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_147698316.1\|2651706_2652288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130686.1\|2655876_2658276_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|274576
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|274576
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|237252
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|227091
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP042432.1\|WP_132130688.1\|2654277_2655009_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	unknown	unknown	gnl\|CDD\|379455
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP042432.1\|WP_158640608.1\|2653817_2654303_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP042432.1\|WP_132130687.1\|2655123_2655627_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238141

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130686.1\|2655876_2658276_+\|ABC-transporter-permease	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	5.72666e-68
NZ_CP042432.1\|WP_132130828.1\|2642579_2643395_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	9.92732e-38
NZ_CP042432.1\|WP_132130801.1\|2648333_2650730_+\|FtsX-like-permease-family-protein	gnl\|CDD\|274576	TIGR03434, ADOP, Acidobacterial duplicated orphan permease. Members of this protein family are found, so far, only in three species of Acidobacteria, namely Acidobacteria bacterium Ellin345, Acidobacterium capsulatum ATCC 51196, and Solibacter usitatus Ellin6076, where they form large paralogous families. Each protein contains two copies of a domain called the efflux ABC transporter permease protein (pfam02687). However, unlike other members of that family (including LolC, FtsX, and MacB), genes for these proteins are essentially never found fused or adjacent to ABC transporter ATP-binding protein (pfam00005) genes. We name this family ADOP, for Acidobacterial Duplicated Orphan Permease, to reflect the restricted lineage, internal duplication, lack of associated ATP-binding cassette proteins, and permease homology. The function is unknown.	1.22925e-71
NZ_CP042432.1\|WP_132130829.1\|2643409_2643691_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000413076
NZ_CP042432.1\|WP_132130815.1\|2638298_2639876_+\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.35947e-10
NZ_CP042432.1\|WP_132130250.1\|2625296_2626658_-\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	4.16357e-132
NZ_CP042432.1\|WP_132130255.1\|2634070_2634418_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.02586e-23
NZ_CP042432.1\|WP_132130800.1\|2647352_2648123_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|237252	PRK12896, PRK12896, methionine aminopeptidase; Reviewed.	5.97769e-99
NZ_CP042432.1\|WP_132130254.1\|2633171_2634074_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.40249e-104
NZ_CP042432.1\|WP_132130252.1\|2627244_2628291_+\|restriction-endonuclease	gnl\|CDD\|227091	COG4748, COG4748, Uncharacterized conserved protein [Function unknown].	6.92001e-127
NZ_CP042432.1\|WP_132130253.1\|2628621_2633175_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	1.14756e-52
NZ_CP042432.1\|WP_132130814.1\|2639877_2640597_+\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	8.68491e-51
NZ_CP042432.1\|WP_147698317.1\|2652203_2653262_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.03329e-21
NZ_CP042432.1\|WP_132130688.1\|2654277_2655009_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.79088e-15
NZ_CP042432.1\|WP_132130251.1\|2626633_2626993_-\|DUF4260-domain-containing-protein	gnl\|CDD\|379455	pfam14079, DUF4260, Domain of unknown function (DUF4260). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 126 amino acids in length. There is a conserved GLK sequence motif.	6.16401e-48
NZ_CP042432.1\|WP_147698315.1\|2650864_2651626_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	2.28315e-49
NZ_CP042432.1\|WP_158640608.1\|2653817_2654303_+\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	2.80316e-16
NZ_CP042432.1\|WP_132130799.1\|2646022_2647366_+\|hypothetical-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	3.59763e-17

>NZ_CP042432.1|WP_132130829.1|2643409_2643691_-|transposase
MKGKRRKFSSAFKAKVALEALKEKETLAELAQRFEVHAVMISKWKQEFLEKSAHVFDKEADQEEQVDPDRLYAKIGQLELENDFLKKSLKKLH
>NZ_CP042432.1|WP_132130828.1|2642579_2643395_-|IS3-family-transposase
MITPSHRLSVRRQCELLELHRSGIYYTPVGEGEKNLALMRRMDERHLQYPTEGVLQLQDYFRDEGLQVNHKRIRRLMRKMGIRAQYPRRILTKLGKAEYIRPYLLRNLKIERPNQVWAVDITYIPMKKGFMYLAAIIDLHSRFVVAWSLSNSMTSEWVCSLVKEAVKRHGKPEIVNSDQGSQFTCREWISLLPQLGIKISMDGKGRAIDNVFIERLWRTVKYEYVYLNPALDGWELEQGLRAFFHRYNFYKSHQGIGRRKPASLYLTGKAA
>NZ_CP042432.1|WP_132130814.1|2639877_2640597_+|ATP-binding-protein
MQELLSQLKTLRLSGMSRSLEAMTATRQHQELTLIEGLALLLQAEEEDRDHKRFDRLIKNARFRYQASMEELHIDAARGIDKTLVTELASNNYVSKGMPVLVEGATGTGKSFLISALGHQACAGGYKVAYYNLQKLLLRIKLTRLDGSIYKFLEKLSRTDLLILDDFGLAHLDQQQRLDLMEIIEDRHGKTATVIASQLPIASWYDVIGDDVIADGILDRLVHSAYKIQLKGDSLRKKR
>NZ_CP042432.1|WP_132130815.1|2638298_2639876_+|IS21-family-transposase
MAGKPRPMSQVKQLIRLHLQGNGKKTIARELGISKNTVKQYLEKAAADPLSIKELLELDDPVLEGRFHAGNPAYKDLRFEDLKRRLPYLEKELEKVGVNKMLLWEEYKQAYPAGYGRTQFFFHFAQLSRARKPSAVLTHKPGDKLYIDFSGKKVHYTDRETGEMIVCELFVACLPFSDYAFCIAVPSQRLNDFIYALIRCLEALGGAAQALVPDNMKTAVTRADRYEPTINQTLEDLANHYQMTVVPARPRKPKDKSLAENQVKLIYTRVLAKLRNRQFFDLDSLNTAITEKIREHNQTRRQQKPYTREEEFLAAEKDQLTPLPDKRFELKYYAELKVAQNGHVYLGRDKHYYSVPYTYIGSKVKVIYTRMLVRIYAQGKQIALHQRNYAPGKYTSVKEHLCSQHQHYHNRSPAYYLDRARHTCRELYDLLEALFGQNRYPEQLYNTCDGLFSLARRSDPGRFARACQIAAEHRVYSYKFVQSILENNMTELEQDRPMDHPLPGGSNVRGKDYYQQLTLTLKTPS
>NZ_CP042432.1|WP_132130255.1|2634070_2634418_+|CRISPR-associated-endonuclease-Cas2
MSKSYYNRFNQYRILWVFVSFDLPTETKTDRKNYAVFRKNLKQDGFSMLQFSIYARHCNSRENAEVHIKRVKSFLPKKGEVILFTLTDKQFGMMEFFRGKSPGEKPETPQQLELF
>NZ_CP042432.1|WP_132130254.1|2633171_2634074_+|type-II-CRISPR-associated-endonuclease-Cas1
MIKRTLYFGNPVRLRLQQNQLVVEYSDEEQENKSVPVEDIGMVLIDHQQVSVTHGIINTLIEHNAAVLWCDNRHMPNGLVLPMSAGHIFTKKLRSQLDASEPLKKQLWKQTIQAKIRNQAGVVEWIGKDAQALRKMASRVWSGDPENIEGQASFVYWKLLFTGDSAFRRHRYGSPPNHMLNYAYAILRAIVARSLVASGCLPAVGIFHRNQYNAFCLADDIMEPYRPVVDRLVLQVLMDHQGDISEELTPELKQELLKVPVLDVVIEKQNSPLMVGMQRTTSSLMKCFEGDSRKINYPEM
>NZ_CP042432.1|WP_132130253.1|2628621_2633175_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKKLGLDLGSNSVGWALVEQDFKSKDGRILGMGSRIIPMSQDILGDFDKGNSVSQTAERTGYRATRRLRERYLLRRERLHRVLYVLGFLPEHYAKQIDFERRLGKFIKEAEPKLAYKVVEDKIKGKNEYEFVFIESFNEMLSDFREHQPQILLSEDGESRLVPYDWTIYYLRKKALTKKIKKEELAWILLNFNQKRGYYQLRGEEEEGNPNKMVEFYSLKVVDVNADEGQKGSSEIWYSLTLENGWVYRRSSKTPLSNWKGKVRDFIVTTDLNDDGTVKTDKESNEKRSFRAPGEDDWTLLKKKTERDIEQSDKTVGTYIYDTLLQNPKQKIKGKLVRTIERKFYKNELRRILQKQKEFHPELRNGDIYNDCVRELYRNNDAHRLLLSKKDFVHLLVDDIIFYQRPLRSQKLSIGNCTLEYRKYKDASGVEHTKYLKAIPKSHPYYQEFRLWQWLCNLSIYKREDDTNVTLKFLTNTSDYAKLFDFLNNRKEVDQKSLLKYFKLNEKTHRWNFVEDKKYPCNDTGYEIRRRFAKIETLPEGFLNPDIEKKIWHIIYSVTDKKEYEKALKSFANKYQVDEIQFVDAFRKVPPFKREYGAYSEKAIKKLLPLMRLGKYWCWDAIDKCSRERIEKIITGEYDENIDDRIREKARHFRDESDFQGLQHWLAQYVAYGRAAITDKWNSVDDLEQYLEDFKLHSLRNPIVEQLIMETLRVVKDIWIKYGNGVKDFFDEIHIELGREMKNTKDERKRIANQIAENENTNLRIKAILAEMVKYTEMENVRPYSPMQQEILKVYEDGVLNSDIEIDEDILKISKMAQPSSADLRKYKLWLEQRYRSPYTGAIIPLNKLFTPEYEIEHIIPQSRYFDDSFSNKVICEAAVNTLKDNQLGYEFVRHHHGEKVQIGHKTVQVFEITEYEDFIKRHYAKSRSKRNKLLMEDIPEDMVKRQMNDTRYISKFISSVLSNLVRAEANDDGINSKNLIPVNGKITNQLKQDWGLNDVWNELILLRFERMNQLTNSSNFTAWSKNHQKYLPTVPLEFSKGFSKKRIDHRHHSMDALVIACTTRDHVNLLNNKYAKSKERFDLSRKLRLFERVNYVDPRTGRRVEREVPKDFIKPWINFTSEAKTAMENIVVSFKQNLRVINKATNRYEKWVERDGVKVKEVRAQKGVNWAIRKPLHKDTVAGLVLLRRRKIVSLNAALETVNEIADRELRKEIQSMQLKGLDRKQITKYFKDIKYQWRGQDISRLEIFYWDNDNVASRVSLNDTFDEKRIGTITDTGIQKILLNHLDSCKGRLDARGKDIPAPLIAFSPEGIEEMNKNIVSLNNGRPHQPILKVRTYEPKGNKFYVGQTGNKRAKYVEAAKGTNLFFAIYQDQVGKRKYETIPLNIVIERQKQGLGSVPSENEQGDKLLFYLSPNDLVYVPSEEEKGDADNADFGDLSTPQLYNIYKVVSFTGYQIFFVKHDVAAPIVNKGEFSPLNKMERAWDGRMIKEHCIKLKVDRLGVISRFNAYIDITV
>NZ_CP042432.1|WP_132130252.1|2627244_2628291_+|restriction-endonuclease
MDFKDSIMQFAGRVEKLLPQIQTEEATKNALIMPFIQLLGYDVFNPFEVNPEFIADLGIKKGEKVDYAIIRDGQPVILVECKHHADSLDPHNSQLFRYFHTTDAKFGLLSNGLHYRFYTDLIKPNKMDEKPFFEFKINEIRDNEIQELKKFHKSYFNLENIANTASELKFLNEVKMLLNKELSSPTEDFVRFFAKQTYPTIVTAKVLEQFTSITKRAFNQILNDLINERLKTALNKENESEAALIKPETKDTLKAETTQDEIDGYLIIKSILRAKVDVQRVVMRDNQTYCAILLDDNNRKPICRLYFNGKKKQLALVGANKKEAKYEIASLDDIYQYSEELLKTAEVY
>NZ_CP042432.1|WP_132130251.1|2626633_2626993_-|DUF4260-domain-containing-protein
MNLLLKLEEIALFGFSIYLFAQTSFAWWWYPLLLLAPDISMLGYVRGPKTGAWVYNFFHHKALGAVLICVGWHFSREWVELSGIILLGHACMDRIAGYGLKYPDDFKHTSLGWLGAGRN
>NZ_CP042432.1|WP_132130250.1|2625296_2626658_-|MATE-family-efflux-transporter
MAGRWAKLENYRVIVRLAIPIILANASVPLLGLADTAAIGRTATARELGAIALGALVFSFVYWSFGFLRMGTTGFIAQAAGARDDQEARLALTRALLLGLGIGVVLVLFQSGICWAALRLLSASDEVSELVKRYFFIRIWGAPATLATFALLGALIGLGHTRKLLITQLFLNGVNVCLNLFFVFELKMGVEGIALGTLIAEWAAFGLALWLVLRSLHFNLFRFLRKSRADVLRKGPLLGMLKTNSDIMIRTLALLGGFAWFTNQGAKFGDATLAANHVLLQFVSLSAFFLDGFAYVVEMLTGRALGAKDRSRFIRDVKNATQLAGGTALLLALMVWTFGRPAISFLTRDAGVQEIAGQHLSYAAIYIAISFFAFQLDGVFIGAIRSREMRNASIASLLLFIGLEIVLTSWTHNNGLWLAFIAYVFIRGITLYLYLPRLMESFRKPSENTISSS
>NZ_CP042432.1|WP_132130799.1|2646022_2647366_+|hypothetical-protein
MQLAYFKKVLLFALTGLLSAVADGHGLQGLRGSHTLTESSLTTTFREPIANDTNHLKIVYFGSSVPAGQGATNHKGYTSLFSDILKNRASEGGNVWETANISIGGDNTIRVLKRYETDLLPQKGDYVVFALALGNEGIHERGQPVFDQFERNMKVLIKKARADGYVPVVTNNYTRNDYNEKDYRFIKQMNILIHGWDVPSINLLGAIDDLSGHWVDGFWDDGFHPNDAGHAEMSYTIVPSLFEALESGKPMPKKVEGSYIRLTKRRSEGKYLTFKPEHIVHPFTTAISFKTSGPGVLLRMEDVDGTGVVSVNDKGRLVYSSAKSGVITGTGKVDDGQWHKVIVSHYYAKGLTMLYCDSTLQGTVEERLVTTGVKIGGAGIPKKLAYKDWLFYRSGMNQDEISCLAKDALLKSSLELYAPLDGKGVSVSDPLVNLAQSMNVIREVSRR
>NZ_CP042432.1|WP_132130800.1|2647352_2648123_-|type-I-methionyl-aminopeptidase
MSITKESELLGMQKASEAVACTLKEMVNHARPGMSTKELDNFGAKVLSGFGARSAPYLAYGFPGWTCISVGDEFCHGIPRRKRILKEGDLVNIDVSAELDGFWADNGGSFVLGEDINQHQKLVDASKEILHKAISHIKGGTKIADIGHLMETEARKRGYKVIKNLGGHGIGRSLHEAPEELLNYRNCLDQRRFKKNSVVAIETFISTSSTYAVERNDGWTMVGNKGGHMAQHEHTIVVTDGKPMILTEMNGIFNAC
>NZ_CP042432.1|WP_132130801.1|2648333_2650730_+|FtsX-like-permease-family-protein
MLRNYFKIALRNLWKHRVFSFINITGLAVGMTACFLIFLYVSFESSYDSFHQKGDRIYRLVSDLKIPTGRNSFGTVPWPVGPAIKNDFPEVESFVRMLSEDLVLTKGNVKFEEANVLYADSAFFQVFDFKLLNGNFRTALKDPFSIVLSRRAAKKYFGNEDPLGQTLTLPRNDTVLTASVTGIMENMPENSQIQADILVSASTLTQFLFPWLDEQWGGIGCSTYLLLKPGANAGALKAKFPAFLDRKAGEQAEARQSERSLQLEPLKEVYLHSRYAGPGMEMGNIQNIRIFSLVAVLIMLIACFNFINLTTARAAERAREVGVRKAVGAVKKHLVLQFIVESVLLCLMAFVLTLILSMLLIPAFNHLAGKTITPGLFASGGVILIVFLAAIGVGLLAGLYPALVLSSFRPVGVLKGRFVANTKGILFRKGMVVAQFTISLMLIIATIVVYRQLHYMRSQDLGFRKDQMMVIKTYSNPAIEAFNQSIERLSGVNSTTFSSSAPGDRNPRANSEIENTQGDLQPLDLDAYFVDFDYMHQYEMEMAAGRPFSRNFGTDSAQALILNEAAVRLLGYTSPEQIIGKRFRQWDKNGKVIGVVKDFHVRSLQDKITPLSIGIDPTLNRFLLSVDVRGANLSATITAIEKEWQKFIPDYPFSYEFLDAAFDQQYRSEERFGNIFSYFTMLAIFISCLGLLGLASYTALQRTKEIGIRKVMGASVASILALLSRDFVKLIAISILIAVPVAWYAMSNWLEGFAYRVNVEWWVLSLASLLLILIALLTISFQSVKAALMNPLKSLKSE
>NZ_CP042432.1|WP_147698315.1|2650864_2651626_-|ATP-binding-protein
MESVKQEIKQLCEQFRLGALYPALDQAVQAAEKNNMGYATFTLQLLKAEAAHRTQRDELKRLKTAGLPKGVDLDHFDTSVDIGFPPKRMGQLRELNWVDQLFNIVLMGPSGVGKTRIASGLCLDAVRAGYSAYFRTMQDIVHTLQTKDAVPSQNTEYRRLMKANLIVIDDIMLFPLNKETAVAFFNFINQIYESASIIITTNKAPAEWAKMLDDEVIATALLDRMLYRCEIIKLSGDSYRMKNRKSFFDNSDN
>NZ_CP042432.1|WP_147698316.1|2651706_2652288_-|hypothetical-protein
MRRDNTISWKSNLYSVPLGTYKGPGTTVTIKPSAEGITVLGVQGNLLCVHRISPLKGQKIILTDHKRDKSTAIAEMMESFAAMMPDHDAALAWIKIVKDSKPRYIRDQVQSLVETVSTLELQVTAATLEYCVAHGINGAADFKAVSAKLQGQSKKRETKVIRMNPLGGGRIAGADIQPDRSDIADYDDLLEKF
>NZ_CP042432.1|WP_147698317.1|2652203_2653262_-|IS21-family-transposase
MNYYLSKIMLYHHIHKMSREGHSISRISMELGLNWRTVKRMLSMDERTFTQELERGRTREKVLDAYEGFVREKLSLHPETPAAQLHDWLKEYHAGFPRVSQKTVFNFVQYVRDKHNIPRTDPVREYMAVEELPYGQQGQADFGFYNMRTTTGKIKKVQFFTFVLSRSRHKYVIFSDSPFTCELLVYAHERAFEFTGGVPREVVYDQDRLMMVSENLGDIILTGAFRSYVRQRGINTWFCRKADPESKGKVENVVKYVKRNFLYNRYYRDLETLNDQTVAWLHRTANNLPHGTTGKVPREELDTEQAFLSPGTRWPYHRRNIPCMPCGATIPSAGRATCTVSRWVPTRGPELP
>NZ_CP042432.1|WP_158640608.1|2653817_2654303_+|hypothetical-protein
MKELIWEIALFLRDKEESSTYCFFYRKEGTGAEADWFLASAKLNACSKGFPEEIVVVSYNLQLLGDQKNRIYRVLNNGDFFKKHFSKVAALTKREKEVVRLLAAGMNSSEIAGTLCVSMHTVQAHRKNIIKKLDIRNFAGLLKFAEVFDLMSPNEHECPVN
>NZ_CP042432.1|WP_132130688.1|2654277_2655009_+|response-regulator-transcription-factor
MSMNARLTDQEIADTNSRQTFSLAAKIHKGEFTIESVGDYLPGNVLVTDLSKPGTVYMNKRGCSHLKHSVEELQALGPAYFQQFFVPDEIGMVIRNYGKMYQRQDMTAGFNFVHRVKHPDEKFYKWHFASARLLFAPGKEHTDKIVLIVNEVHSAESITKKINSALDESDWMKKNFLKFCRLTRREKDIIALIVDGNSTADIADFFCISQLTVKTHRKNLLSKLEVNSFAELYKFALTYGLVR
>NZ_CP042432.1|WP_132130687.1|2655123_2655627_+|hypothetical-protein
MNNRPLLILMLLISCFHVSCQKDKAVPCEKVLNDGPTEMVGILVVDEETGESIILAHDLDSTDVKVTSVNDGKPYKDYQIANAIDDRLMRGAVIFYAPKQEGVYLYELRVGDHGRVKFSYTVSRVGTGDACRPYVYPVSEVKIIDRPSEPIEHSMLPEQLTLLQVAL
>NZ_CP042432.1|WP_132130686.1|2655876_2658276_+|ABC-transporter-permease
MLRNYLKIAFRNLWKHRLFSIINITGLAVGMTACFLIFLYVSFELSYDKFHSKADRIYRLVCNIKTPTETIDNFSNTGWAMAPNIQSGLPEVESFVRLKEDDVLVRKGTLKFQEKNAVWADSAFFRVFDFKLLSGHAGTVLKEPFSIVLTQSAAKKYFGNEDPVGQTLTLPRNDMTITATVTGLMQDIPENSQIKGDILISMSSRKAFSPGEDEQWNNLQAISYLLLKPGASASTLEAKFPAFLEDRRGDIMRHEQMFFSLFLEPLKDIYLHSNRVSFEGKTETGSMRNVYVFSSVALLILLIACFNFINLTTARASQRAREVGVRKVVGAVKKNLSLQFIGESVLMCLMAYVLAVILSALLLPVFNYLAGKAVAQNLFENPFSLLILLLGAIGIGILAGFYPAWVLASFKPVTVLKGRFVTSAKGIMLRRGLVVAQFAISLILIASTIIVYKQLTYMRTQDLGFRKDHTMVIDSYSDPARYAFKEAIDGLSGVQSTTISSHVPGGDHSGYYAEIENRQGDMQVTTFEVYLVDFDFISQYQVKMAAGRQFSRNFATDSTQAMILNEAAADMLGYRSPEEALGGRFNQNGRVGKIIGVVKDFHYHSLREKIQPLTMRIEPNEWKLISVKVSAADLPATIAAIENAWNALIPARPFTYRFLDTSFDNQYRGEERFGRLFLNFAILAIFISCLGLLGLASYTTLQRTKEIGIRKVMGASVASVVTLLSKDFIKLVGIAILIAVPLVLYAMRQWLEGFAYQTAIAWWVFVLAGLLALVVALLTIGFQSVRAALMNPVKSLRSE

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Crispr_ID: NZ_CP042432_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_16

2674720-2674994

Orphan

Consensus_repeat	Method
GCCGAATTATTCGAGATAGTCGTATTCAGGATGGTTGGGGAAGAGCTAGAAT	PILER-CR
GCCGAATTATTCGAGATAGTCGTATTCAGGATGGTTGGGGAAGA	CRT

3 spacers

The CRISPR arrays of NZ_CP042432_16

>merge|NZ_CP042432|16|2674720-2674994|PILER-CR,CRT
GCCGAATTATTCGAGATAGTCGTATTCAGGATGGTTGGGGAAGAGTTAGAATTACCCATTCCGCCGCCATAATTCGCCGAATTATTCGAAATAGTCGTATTCAGGATGGTTGGGGAAGATCCAAGATTGTACATTCCGCCACCGTTTAGGGCTGAATTATTCGAGATACTCGTATTCAGGATGGTTGGGGAAGAGCTAGAATAAAGATTACCGATTCCGCCGCCATAGTTCGCCGAATTATTCGAGATCGATGTATTCAGGATAGCAGGGGAAGA

>NZ_CP042432|16|5|2674720-2674921|PILER-CR
GCCGAATTATTCGAGATAGTCGTATTCAGGATGGTTGGGGAAGAGTTAGAAT	TACCCATTCCGCCGCCATAATTC
GCCGAATTATTCGAAATAGTCGTATTCAGGATGGTTGGGGAAGATCCAAGAT	TGTACATTCCGCCACCGTTTAGGGCTGAATT
ATTCGAGATACTCGTATTCAGGATGGTTGGGGAAGAGCTAGAAT

>NZ_CP042432|16|1|2674720-2674994|CRT
GCCGAATTATTCGAGATAGTCGTATTCAGGATGGTTGGGGAAGA	GTTAGAATTACCCATTCCGCCGCCATAATTC
GCCGAATTATTCGAAATAGTCGTATTCAGGATGGTTGGGGAAGA	TCCAAGATTGTACATTCCGCCACCGTTTAGG
GCTGAATTATTCGAGATACTCGTATTCAGGATGGTTGGGGAAGA	GCTAGAATAAAGATTACCGATTCCGCCGCCATAGTTC
GCCGAATTATTCGAGATCGATGTATTCAGGATAGCAGGGGAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_147698322.1\|2689618_2690065_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP042432.1\|WP_132130683.1\|2660292_2660745_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP042432.1\|WP_132130682.1\|2660765_2661755_+\|gluconolaconase	unknown	unknown	gnl\|CDD\|380207
NZ_CP042432.1\|WP_147698320.1\|2677933_2682190_-\|BspA-family-leucine-rich-repeat-surface-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP042432.1\|WP_147698323.1\|2690070_2694882_-\|RecQ-family-ATP-dependent-DNA-helicase	unknown	unknown	gnl\|CDD\|223588
NZ_CP042432.1\|WP_132130691.1\|2663656_2664343_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP042432.1\|WP_132130679.1\|2666203_2667403_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379049
NZ_CP042432.1\|WP_132130676.1\|2682359_2683139_-\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|379306
NZ_CP042432.1\|WP_158640601.1\|2687873_2689490_-\|IS1634-family-transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP042432.1\|WP_132129001.1\|2696754_2697267_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237118
NZ_CP042432.1\|WP_147698318.1\|2668440_2671131_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376100
NZ_CP042432.1\|WP_158640611.1\|2695150_2695303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_158640610.1\|2683129_2683612_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379049
NZ_CP042432.1\|WP_147698321.1\|2684531_2687657_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP042432.1\|WP_158640609.1\|2667504_2668410_-\|type-IX-secretion-system-membrane-protein-PorP/SprF	unknown	unknown	gnl\|CDD\|274625
NZ_CP042432.1\|WP_132130674.1\|2683766_2684387_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP042432.1\|WP_132130681.1\|2661780_2663547_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|225044
NZ_CP042432.1\|WP_132130684.1\|2659056_2659950_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP042432.1\|WP_132130680.1\|2665418_2665877_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380361
NZ_CP042432.1\|WP_132130685.1\|2658401_2658968_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_147698322.1\|2689618_2690065_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.29617e-12
NZ_CP042432.1\|WP_132130683.1\|2660292_2660745_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.13807e-16
NZ_CP042432.1\|WP_132130682.1\|2660765_2661755_+\|gluconolaconase	gnl\|CDD\|380207	NF033206, ScyE_fam, ScyD/ScyE family protein. This family includes ScyE, a protein involved in scytomenin biosynthesis and export, and its paralog ScyD. Some members of the family contain a C-terminal PEP-CTERM domain that predictions anchoring to the outer membrane.	1.68392e-09
NZ_CP042432.1\|WP_147698320.1\|2677933_2682190_-\|BspA-family-leucine-rich-repeat-surface-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	8.4945e-60
NZ_CP042432.1\|WP_147698323.1\|2690070_2694882_-\|RecQ-family-ATP-dependent-DNA-helicase	gnl\|CDD\|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	1.46807e-107
NZ_CP042432.1\|WP_132130691.1\|2663656_2664343_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	2.39147e-07
NZ_CP042432.1\|WP_132130679.1\|2666203_2667403_+\|AAA-family-ATPase	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.44188e-27
NZ_CP042432.1\|WP_132130676.1\|2682359_2683139_-\|DUF4143-domain-containing-protein	gnl\|CDD\|379306	pfam13635, DUF4143, Domain of unknown function (DUF4143). This domain is almost always found C-terminal to an ATPase core family.	2.75194e-40
NZ_CP042432.1\|WP_158640601.1\|2687873_2689490_-\|IS1634-family-transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	2.76082e-14
NZ_CP042432.1\|WP_132129001.1\|2696754_2697267_-\|hypothetical-protein	gnl\|CDD\|237118	PRK12496, PRK12496, hypothetical protein; Provisional.	1.3701e-07
NZ_CP042432.1\|WP_147698318.1\|2668440_2671131_-\|hypothetical-protein	gnl\|CDD\|376100	pfam18676, MBG_2, MBG domain (YGX type). This domain is found in a variety of bacterial extracellular proteins. This domain is related to the MBG domain (pfam17883). But it replaces the characteristic YDG motif close the N-terminus with a YGX motif.	1.07945e-18
NZ_CP042432.1\|WP_158640610.1\|2683129_2683612_-\|AAA-family-ATPase	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	3.4154e-16
NZ_CP042432.1\|WP_147698321.1\|2684531_2687657_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	9.39625e-21
NZ_CP042432.1\|WP_158640609.1\|2667504_2668410_-\|type-IX-secretion-system-membrane-protein-PorP/SprF	gnl\|CDD\|274625	TIGR03519, bacteroidetes-specific_membrane_protein, type IX secretion system membrane protein, PorP/SprF family. This model describes a protein family unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that have type IX secretion systems (T9SS) and exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility.	7.0412e-55
NZ_CP042432.1\|WP_132130674.1\|2683766_2684387_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.15232e-55
NZ_CP042432.1\|WP_132130681.1\|2661780_2663547_+\|c-type-cytochrome	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	7.18777e-42
NZ_CP042432.1\|WP_132130684.1\|2659056_2659950_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	4.84344e-19
NZ_CP042432.1\|WP_132130680.1\|2665418_2665877_+\|cupin-domain-containing-protein	gnl\|CDD\|380361	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain. This family includes archaeal, eukaryotic, and bacterial proteins homologous to hydroxynitrile lyase from Granulicella tundricola (GtHNL), a novel class of HNLs that does not show any sequence or structural similarity to any other HNL and does not contain conserved motifs typical of HNLs. HNLs comprise a diverse group of enzymes that vary in terms of their substrate specificity, enantioselectivity and the need for a co-factor. In plants, they catalyze the reversible cleavage of cyanohydrins, yielding HCN and aldehydes or ketones. Also included in this family is TM1010 from Thermotoga maritima, a protein of unknown function. Some but not all members of this family have N- or C-terminal carboxymuconolactone decarboxylase domains in addition to the cupin domain. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.00833e-56

>NZ_CP042432.1|WP_147698318.1|2668440_2671131_-|hypothetical-protein
MGYSGNSQGAAAVGQYEIIPAGYTPLNNYTFNYQPGTLTIIPAGQVVINFPQPDPMIYGDPDFDPDATSSDGRQIEYTSSDENVAIITINGLVQIVGAGTTNITAILPEDQNYEDVMPVSRELVVSPAPLTVTADDDSKTYDGLAYSGGNGVTVAGWQYEDTDALLEGMVSYNGSSQGAIDAGAYEIIPSGYELLDNYTLNYQPGTLTIIPAGNVVINFPELEDVIYGFADFAPGASASNDSEVEYTSSDENVAVITSAGEIQIIGAGTTEITASLAIDPNYENADPVTRVLVVNPATLTVIANDDSKTYDGAPYSGGNGVTTTGWQYEDTDALLEGTLSYSGSSQGATDVGIYEIIPSGYEALGNYTFSYQPGTLTTTPAEKAVITFPAPEAVVYGAPDFDPAATSSDGRQVEYASSNENVALVTAGGFIQIVGAGEIEITAFLPDDPNYENVPPVIQELTIKPAMLTITAVDDSKTYDGAAYSGGNGVTVTGWQYDDTDALLEGTLNYTGNSQGAVNTGEYLIVPGGYSADNYEIVYKSGALRVSKAPLVITAVNKTRKFGWENPVFTFNYQGFVSGENEDDLAALPTAVTTANETSPPGIYPITTSGAASENYQISYVNGTLTVIPATRSLVFEALPEKTYGDADFDPGAEARPEETILYSSSNTGVAEIINGMVHITGAGTAVITATLAENPNYDNRPSISRELIVHKASQTIDFVLPGEVERDAGIIALQISASSGLPVTLSSSDDQVAIVAGGAGENQLEILRLGTSFITAVQPGNANYLPAEPVSRQLLVVDPAGNLIKVHQVVSPNSDGINEFLLVEGIRDYPENKMTIVTRSGAKVFEIQGYDNGSRVFKGIANTRVNYEFLPRARISTCWNSRPAASGNVKRDGLS
>NZ_CP042432.1|WP_158640609.1|2667504_2668410_-|type-IX-secretion-system-membrane-protein-PorP/SprF
MKTIYNTLLLLLCTTGLAYAQQPFTYTQYMDNLAPINATYSLLDKAGAVHALVRKQWVGIDGAPSTLIANGHLPLASIGAAAGLNIMHDEFGPEKMTEASAFLAKSVRLSEKEYLAASMSFGVRRYEARYSGLDPHDPLFQDDILETVGTLGLGLMYFIPEKFYAGVSVPRISFRELGRASVEDSRYFKNHYYLMMGFLGSLGEDIKIKPAILASYASNIPLHADISTTLYLKEAIGLGLNYRTNNEMGAILSVFLNNRLRFGYSYQFGLNSYRLGQVNDGTHEITLGYRFGEGIGFSKLL
>NZ_CP042432.1|WP_132130679.1|2666203_2667403_+|AAA-family-ATPase
MEPLIEYQQNLVDEVNNDFHRFLYHRLPWESRMLAIKGLRGAGKTTMLLQHLKYGQPQGTKSLYITADHPWLYTHTLLDTARMWVQNGGQALYIDEVHKYANWSREIKNIYDGYPKLQLFFTASSALDIYRGESDLSRRVLTFTLPGMSFREYLNLMYGRALAPVSLTELLSNPIEISSTLRKQIEIPIPLFHEYLMKGYLPFVHDDRGKSYLPKLMRVIETSITDDLAFIENYSATHIVKIKKLLGVIAESAPFEPNISSLAQKLQLGRDTVNNFLHQLERAFLLNLANRPSEGVAALQKPDKIYLENTNLSYALREHPDPGTTRETFFLNQLRNAGYKIHLAGKGDFLVDKTYTFEVGGRNKSIKQIAGIPNAYIVSDNIEIGFNNKIPLWLFGFLY
>NZ_CP042432.1|WP_132130680.1|2665418_2665877_+|cupin-domain-containing-protein
MKHNLIYILPLAIALLTACNNNALVFPKGEKIMNENFTGTAYLQMLMEADSLNSISVGNVTFEPGARSNWHLHPAGQILLVTDGVGYYQEKGQSKKILRKGDAVKCPPNTPHWHGASADTAFIQVAITGRENGPTVWLEEVTDEEYHSEPER
>NZ_CP042432.1|WP_132130691.1|2663656_2664343_+|carboxymuconolactone-decarboxylase-family-protein
MTMVAMFSTVNAQQKSKAEEPLSPKQESIIVIASYTAQGGLENLHQALGTGLDNGLTVNQIKEAIVHAYAYCGFPRSIRGLQTFMEVLDERKARGINDDWGPEASPIADERNKYERGAETLYELTGKKWDKPESGYGAFSPEIDRFLKEHLFADIFERDVLSYAERELVTVSVLSGIGGVEPMLRSHLNICLNVGLTPKQLQQFAGIIKRTIGKQEAKAVQTALDEVL
>NZ_CP042432.1|WP_132130681.1|2661780_2663547_+|c-type-cytochrome
MDIKNTFFKKHILYRLNSLVMRAGRLLSILSLLVLLIAGCSNQAQKEEAATKIVCAAGNGGITLPEGFCATLVIDSLGLRDDHSARHIAVAPNGDIYVKTRSQEGGIAALRDTTGDFRADIIEYFGDMTGTGDGILWETGIAIHDGYLWASNTVAVYRWPMPEGNALIPEGEPEIVVSGFPEQQSHASKSFAFDGRGHLYVSVGAPSNACQEQERTNGSPGIEPCPLLEEHGGIWRFDANQTGQTFSADARYATGLRNVVGLDWNVAGDALYVMQHGRDQLHTLWPDFYTVEESAELPSEAMYKVNEGDRFGWPYGYYDHLKDTLMLSPEYGGNGKITISESKYAGEFEEPVIGFPGHWAPNDLLFYTGEQFPERYRGGAFIAFIGSWNRAPLPQKGYKIAFVPFRDGQPSGDYETFADGFAGVEPIPDRGAAEYRPTGLALGPDGALYISDYKKGRIWRVVYTGKAAPADDTTVSMPADTTGTPSARTAAASSLTGEALFRRMECATCHTVDPNAPASTGPSLYDLYGSEVTLQNGRAVMADEAYLRESILQAGAKIVAGYMPVMPSYEGQLMKEELSLLVSYMKSL
>NZ_CP042432.1|WP_132130682.1|2660765_2661755_+|gluconolaconase
MQKRKLGKILTLMMAVSIFSNPVFAQEQETEPYPVGNPLSSNVKVYGGIYGAESCSYDAARGVIVVPNRGAPQNVRTNDAWISFINHDGSVHTLRWIGIQHADGRKTLSPPLVLNEPFGSDIVNDVLYVADRDGGTANDDPSVAVIRQFDMKSGKPLKEFRIEDSPWVNDIEVREGGTIYATQTGDFFGEDPNPETWKVWKITPDGKATVFVQGEPLNAPNGIAFDPEGNIVVANFGNAEVLTFSEDGKLLKTESAAQPGSDGLVIMPDGTKYVCSVTQGGVSRIRPGESAELIANNIPNAASMCYDAGANQLVIPMNSSNSLAFIPLD
>NZ_CP042432.1|WP_132130683.1|2660292_2660745_+|nuclear-transport-factor-2-family-protein
MRASIIGLFLVLISTQWSFAQNSATEQEIKDLSKMKWEWMAEKDVDKLAKLFHERSKFVHMSGTWKKAEELDIIKTGRIWYKKADVHDVAVEVFDDTAILWNRITLQAVVRGNEVSNEFTVTEVYQQQGSGWKLLALTFSSVRDTHTIEH
>NZ_CP042432.1|WP_132130684.1|2659056_2659950_-|AraC-family-transcriptional-regulator
MEDIVNFHTIHEYNVFNNNETLHPLVSIVDLDKAEPRRLRRLQYDFYTVFFKKIYCGDLRYGLNNYDYEEGTLIFLAPGQVIGENKDEYYQPQGIALVFHPDLLLGTALGKKMADYTFFSYAVNEALHLSEYERKTILDCFEKIQYELKRSIDKHTRQLIVSNIELFLNYCERFYDRQFITRENANKGILEKFETQLNNYFTSEKPYSIGLPSVAYFADALHLSSNYFGDLIKKETGKSAQEYIQNKIIEIAKDKVFGTQTSISEIAYELGFKYPQHFTRLFKQRVGYTPNEYRNLN
>NZ_CP042432.1|WP_132130685.1|2658401_2658968_+|hypothetical-protein
MELKYIAILPFLLFCNTCFSQENTKQAGYFNITEVGYIKGMSASYSGSKGYKAPSAGSLRTINGVFLSPEWSLGIGIGLDGYNKSHDEGLFRQYHNTAPVFFDARYYIDNSPNTPLVFTDIGYSLSWGDNFDKGLMLNIGGGYKFFPGSKTCLIAALGYNLQQIEGAVNAASDNLNLHSASLHVGFLF
>NZ_CP042432.1|WP_147698320.1|2677933_2682190_-|BspA-family-leucine-rich-repeat-surface-protein
MKKFYALPLVFLLFLTANARAQNAAFITKWKVSDGSISIPTEGGGYNYNITWTDLDNSASGTVNNITGDYTISGLTDGHTVQVAITGSFPRIWFDYSDNGDKIIEIVQWGDIQWTSMQYAFAGCENLNITAIDIPDLSGVTDCSGMFHGCTSLAGSGANWHWETGNVTDMDRMFAGAYSFNQNIGDWDVSSVTTMNGMFSGAGSFNQNIGNWNVSSVTNMQYMFSNAYAFNQNIGNWNVSNVKKMTRMFNMAFVFNQDIGNWDVSNVDNMQSMFENASAFNQDIGDWIFPNITPINGMYKMLDNCGLSIANYDATLIGWAGQNNLPNGVSFGAAGLSYCLGSIARQTLIDIYGWTINGDGEAAGCPGIHADANNVFYVDSAAAPGGDGSSWATAVNQLSDALTAAAQFHSVNPDILYQIWVTEGTYYPQYAPANTTSTGNPVTDRDKTFFLPHQTNIIGGFKGTETSPDQRTPVTGKGTVLSGDIGVKGDASDNVYHVAMTLDDGSGSTRGGILGYMTITGGNANGTGSITVNGFQVKQNQGGGLYARGLDFSIYNCLLTANYAADKGGGVMNVYGPTSIFGRTFVVSSTLANNNAGNLGDDIFNYQLQNSMSIVSSILADGINYTGTTDPADIQYSLVKGKPADAAKHNLDGNANPHFKNEAAGDYRLAGNSPSINAGFLDGLDPSTLTDLAGYPRVYDYNNGGIIDMGAYEFQGNPVRPDAGGILYVDIAAAPGGDGSSWAKALPQLSDALHFARGNAAIWESGSLRIYVAKGTYFPEYRAHDNRKAINDRNNAFVMVKNVQLYGGFDPAAGAGTMDTRNWAANPTVLSGDIGTLNNIADNAHHVVISAGDVGSALLNGFIITRGNATGSGTIAVNGQTVEVIAGGGIYNLASDPVLTNLIISGNTAGSGGGMYNIGSSPHLTNAAISGNSAGTNGGGIRNFNGSDPVLTNVTIAGNTTAGSGGGMANNASSPSVNNSILYGNTAATGNNIINAVGSTIAFRYSLLEGSSWDSNWGTDDGNNIIATTSPFADADTRNYRLTVASPAVNAGNNTLYTNAGGNIADDNDLAGQHRVYNQASSGIIDMGAYEYQGTPVTPGTGNILYVNQNVSGGNGSGDSWANAIPELADALKWARQQHNADNNWLQNDSLRIFIAKGTYKPLYNAEDGAYTTDGSRDNAFVLVKNVQLYGGFPDTGNPGIGDRDWNANPTILSGDIGTPDDNSDNTYHVVISCGYVDNAGLNGLTISGGNANGENYILINQNVFDQNSGGGMFNQSSSPTILNIMISNNSAEYGGGMYNFISAHPTILNTFISNNSAEHGGGMYNYQSSPTIVSTIISNNSAQAGGGGVYNYNSSPTILNTTISNNSAEDLVGGVANFQSSLVVNNSIVFGNRLADATVSNIFNENGGSVLLFSNIV
>NZ_CP042432.1|WP_132130676.1|2682359_2683139_-|DUF4143-domain-containing-protein
MELIIDKMIVGGFPTLLNKRVTQAADLNRAYVELLAEVDMSRVSDVKRDPVKVRSLLRSLARNTATLVDISALESDIREKDNVGITRPTVYDYLNALNRLMIVEDQPAWNTHIRSSSALRKSPKRHFTDVCLAIAALGANETALLNDLHFTGFLFESLVTHELRVYAQANDAKVYHYRDSSGLEVDSIVQKYNGDWCAFEIKLGTGQIDEAAAALNKFISILDDKKINPPKSLNIITGTGISYTRQDGINVISLASLGA
>NZ_CP042432.1|WP_158640610.1|2683129_2683612_-|AAA-family-ATPase
MDYTKRISDNELQRKLNASGAVLIRGAKACGKTESAKQLARSVLNVDSDEQVQALINIAPKRLLIGNVPRLVDEWQAQPKLWDYIRHEIDDRKKNAQFILTGSANPEESAKMHSGAGRFTIVDMRTMSWQELGFSSGKVSLQKLLKVIKLIFTTNPPAWN
>NZ_CP042432.1|WP_132130674.1|2683766_2684387_-|response-regulator-transcription-factor
MIRLGIIEDDRTVRRSLVGYFSREPGFSCLLNAGSVEEFMDSWAEDIYFDIILSDIGLPGVSGSDGVRLIRKKAPKCQVVMLTVYEDSHHIFEALRAGASGYLSKQTLPQKIKEALNTVHEGGAYMSPGIARRITDYFHPLPPSSSRESLTIREEEILQAVEEGLTNKEIAANLGITSETVKSHIKKIYTKLEVTSRRDIVRGKYK
>NZ_CP042432.1|WP_147698321.1|2684531_2687657_+|hypothetical-protein
MTRTYCLFILLLCLCAGASAQKSTLHFSTVKLPDDFPVYSIRFIERDEAGLLWLVTGNGLYRFDGSNLLHFDLKSEPALPSFPVTALRADQRGNLWLGFRNGAARFDLRNWKITSLYAEDWPRGLPNDKSIESINYTPDGSVYYGSTSGKLYRYRDHRLQLMLDMTEPYGEYGGPSIESVQEPYPGQLWLTTGNGMLVHLPLEGSGYGEPVYFKPIELKERTTRICFGPDGKFLISVRSDGMFLGDTRELLKRWQADSLKLDGPVRRGYLRRVVLPEDDNGNIYSPFYIAAKTGTKVAAILSHDRYSNNIYTFDFSGEDWKLETPARPVNFPGTKINKVSGDGLSTFICSGEGLVSLGFRQSALSSLLTGFNDPNSIRTAYKSEDGALYVSSYRDRFIRYNENTGERTPLSRMYIYSVLPWGRDTLLLATEGDGMQWYLPRENRFVPILTDKESSYVTALCRMNDTLVWAGTYEGINLVNPVRRIIYPVLKGPLFSRLQGAKVYAIIPDPGTATKSAGSGRAGRYLVATTAGVFRINAATGEIEYFIDGSDTLQHTVVYSLLEIGGNVWMGTNGQGVLVSDGVGNLMNTEWLDGRLAGNMAFSLSRVGDIVLAGTDNGMSLIRLRDSSVTAYSIYNGLPAGEFNHSAVFSNGREAYLGTVNGLVHWQGGERYDRDNEHAIGRIPVTRLLIEDEKDVKKNDYRLPYLPSDSIQVVIPPGTGYFSLSFGPATGTERLLPLFYRLGSESNWNEMGNQREINFLKTEPGSYRLEVAARTPGGTWMPGLLNIPLVVEPAFYQTAVFKLLLMLIPVLVVILLFHYRELQLQKERRLRIKIAGDLHDEVGSSLTRIWHQAAMGAPLLEAKAEVTTMDLEYDGPEPDASRLKVISETSREALATMSDIVWSIDARFDTMKDLVLRMKDYTYRLRYELDIPLAFKLSGPYENKKVSQIVRQNLFLLFKEAVNNAIKHGDDGQVSVQMTFSNDHLELQVINSCTGNGQKAADTIQGGRGLENMRRRALKMQAHLRAGREGDEFRVRVGLGC
>NZ_CP042432.1|WP_158640601.1|2687873_2689490_-|IS1634-family-transposase
MAFLKVERKPSGTYLRILESYRNAEGKPTSRVLYSLGKAEDYTPGQLRRMGIQLYELGGGEVKALLTGQIEELARYNYGFAQVYKRVFSHYGLDILLRRIARKQKLEFDLRNAVLLMLLERLQEPSSKRSNWLNQQEYAGVDPVSLHHLYRALDRLAENERLIQERIFQTGRDMFSQRLDVVFYDVTTLYFESEVEQEGALRQKGFSKDGKIGRTQILFCLMIDKEKNPIGYRIFKGDTFEGHTFGQALCDLKAHYQIDKVIVVADRGMLSRKNIDLTTENGFEFIVGERLKALPRSVQSALLDHSAFQHEWVYSDHTGEEIKLRYKMISHEGRKIIATWSAKRAAKDKSDREERLQTAQKLLQHPSLIDKKAGRFFLQKQGGGSYALDQEKIARSERYDGLLAISTNNTTLSVPAVLEQYKQLYKIEHSFRTFKSHLETRPMFHWTDKRIQGHICLCYIAFTLQNYVLQKINQSQVKLTENELRKTLERMQVSLLQHNQEQVCIRSKPQGKEAVLQQKLGLKQLPPILPQTQLANYL
>NZ_CP042432.1|WP_147698322.1|2689618_2690065_+|hypothetical-protein
MSNSSDIVWSIDARFDTMKDLVLRMKDYTYRLRYELDIPLAFKLSGPYENKKVSQIVRQNLFLLFKEAVNNAIKHGDDGQVSVQMTFSNDHLELQVINSCTGNGQKAADTIQGGRGLENMRRRALKMQAHLRAGREGDEFRVRVGLGC
>NZ_CP042432.1|WP_147698323.1|2690070_2694882_-|RecQ-family-ATP-dependent-DNA-helicase
MKQIVFIDIEVDPTTRNIRDLGGIKSDGSLFHKGAITEFTRFIQGTHFICGHNIVNHDLNYIGDTISNVGINPANIIDTLFLSPLLFPSKPYHALLKDDKLQYDESNNPLNDAIKARDLFYDEITAFNQMGERLKQICYLLLKNKPQFRAFFDFMAYSSPETNPEKLIRQHFRHELCESADLTQIITNQPVALAYCLSLINANNRYSITPRWVLKNHPEVERILFRLRNQPCLTGCAYCNMALDTHHGLKKYFGFESFRTYGEEPLQEMAVKAAINNQSILAVFPTGGGKSITFQVPALMSGETSKALTIVISPLQSLMKDQVDNLEKTGITDAVTINGLLDPIERAKSFERVEDGSASILYISPESLRSPTIERLLLGRKISRFVIDEAHCFSSWGQDFRVDYLYIGDFIKSIQEKKNIEDGIPVSCFTATAKQKVIEDIRNYFSEKLGLDLQLFTSTASRTNLQYQVYEKGDEEEKYQAVRDLIEAKNCPTIIYVSRTRKAYLLAERLTADGFKASPYHGKMEAKEKTANQNAFLAGEVPIMVATSAFGMGVDKKDVGMVIHYEISDSLENYIQEAGRAGRDENVVADCFVLFNEEDLGKHFILLNQTKLSIKEIQQVWKAIKEITRFRSTVSNSALEIARKAGWDDNVVEIETRVTTAIAALEDAGYLKRGQNMPRVFANSILSKNAQEAIDKINASSRFAENQKEKAIRIIKKLFSSKSRKRTQEDAAESRIDYISDHLGIVKKDVIGIVNLLREEKILADGKDLTAFIRKGENKNRSLDIVKTFNRIEDFLVPIIEEQETTFHLKELNEKAQAQGYEDTNTNRIKTVINFWAIKNWIKRQQLPYSKNHVNIRSLHPKAILEDKLKKRHDLATFIIELLHERSRLSAPVAEATKEELLVEFSVHELKEAFENSIASFGMKVSIDDIEDTLFYLSRIGAIKIEGGFLVVYNRLTIERLEPDNKKGYTKEDYKKLGQFYENKVHQIHIVGEYAKKMINDYRDALQFVEDYFQLNYASFLIRYFPGSKANELKLKMTPTKFKQLFGELSPTQLKVINDNDAKYIVVAAGPGSGKTKVLVHKLASLLLMEDVKHEQLLMLTFSRAAATEFKKRLLKLIGNAANFIEIKTFHSYCFDLLGKVGSLEKSDAILQKTVEKINRGEVEPSRITKTVLVIDEAQDMNVDEFNLVKALMDQNEEMRVIAVGDDDQNIYEFRGSNSHYLKQFIQLEHAVKYELIENYRSKRNLVEFTNQFAHRIGQRLKTTPVIAKQPDNGDIKLVRHQGYNLITPLVQGVLKTGLSGSTCILTKKNEEAEQITGLLLKHKVQARLIQSNDGFNLYNLAEVRFFLDQLNMCNDIFLISDDNWSTAKQVLTDRFRSSTKLDICVNLIKDFETTNPKRKYKSDLEIFIRESKLEDFFNQSSETFFVSTIHKAKGREFDNVFLLLERFVSTSDETQRQLYVAMTRAKRNLTIHMNADFLDNIAVDSVEKLVDPNHYPPPEELAIHLTYQDVWLDYFINRQHFVSQLVSGDNLVIVDDKCLTHSGQSVLKFSKKFLDQIEKKKKMGYELKSAKVNFIVHWLKEGTEREIKIILPEVVFERNGNV
>NZ_CP042432.1|WP_158640611.1|2695150_2695303_+|hypothetical-protein
MNGPLIKYQQKLVDEVNNDFHRFPATALERPGGIVLTEKLAEKLFGPMNP
>NZ_CP042432.1|WP_132129001.1|2696754_2697267_-|hypothetical-protein
MTMKLTITDACIFIDLHLLGLVVPFFELDVETHTSLDVFNELNEEQQHLLSAYQSMGKLTVHTIHHEDRIAIHKVGYPKALSEMDCTVLYLAVQLGAIVLSSDKTVRNFAKKSSIEYHGMLWILDELVVQNRIASTVAASKLRQLITSNYIYQNNAVLVKEMNKRLRIWQ

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Crispr_ID: NZ_CP042432_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_17

2792180-2792267

Unclear

Consensus_repeat	Method
AATTGACAACTTTGAACTTTAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_17

>merge|NZ_CP042432|17|2792180-2792267|CRISPRCasFinder
AATTGACAACTTTGAACTTTAAACCGTTGCGAAGAGTTTAAAGTTCAACGTTCAAGGTTTTAGAATTGACAACTTTGAACCTTAAACC

>NZ_CP042432|17|16|2792180-2792267|CRISPRCasFinder
AATTGACAACTTTGAACTTTAAACC	GTTGCGAAGAGTTTAAAGTTCAACGTTCAAGGTTTTAG
AATTGACAACTTTGAACCTTAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129069.1\|2789725_2790718_+\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|273464
NZ_CP042432.1\|WP_132129067.1\|2787746_2788442_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|184722
NZ_CP042432.1\|WP_132129068.1\|2788465_2789716_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422
NZ_CP042432.1\|WP_132129065.1\|2784521_2786114_+\|sodium/solute-symporter	unknown	unknown	gnl\|CDD\|271360
NZ_CP042432.1\|WP_132129076.1\|2798822_2799269_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372314
NZ_CP042432.1\|WP_132129075.1\|2797859_2798414_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP042432.1\|WP_132129070.1\|2790830_2792135_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP042432.1\|WP_132129066.1\|2786323_2787676_+\|trigger-factor	unknown	unknown	gnl\|CDD\|272913
NZ_CP042432.1\|WP_158640618.1\|2800021_2800543_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP042432.1\|WP_132129061.1\|2778917_2780180_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP042432.1\|WP_132129079.1\|2800953_2802513_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP042432.1\|WP_132129077.1\|2799259_2799850_-\|uracil-DNA-glycosylase-family-protein	unknown	unknown	gnl\|CDD\|381683
NZ_CP042432.1\|WP_132129064.1\|2781966_2784435_+\|glycoside-hydrolase-family-95-protein	unknown	unknown	gnl\|CDD\|379625
NZ_CP042432.1\|WP_158640617.1\|2780869_2781931_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99810
NZ_CP042432.1\|WP_132129062.1\|2780224_2780755_+\|DUF4142-domain-containing-protein	unknown	unknown	gnl\|CDD\|379301
NZ_CP042432.1\|WP_147698326.1\|2802538_2803591_+\|TonB-dependent-receptor-plug-domain-containing-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132129071.1\|2792318_2792990_-\|DUF4290-domain-containing-protein	unknown	unknown	gnl\|CDD\|379482
NZ_CP042432.1\|WP_132129072.1\|2792995_2795320_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273429
NZ_CP042432.1\|WP_147698327.1\|2803833_2805720_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|274948
NZ_CP042432.1\|WP_132129074.1\|2796815_2797817_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129069.1\|2789725_2790718_+\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|273464	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven. [Amino acid biosynthesis, Serine family].	1.06918e-137
NZ_CP042432.1\|WP_132129067.1\|2787746_2788442_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|184722	PRK14514, PRK14514, ATP-dependent Clp endopeptidase proteolytic subunit ClpP.	1.02883e-117
NZ_CP042432.1\|WP_132129068.1\|2788465_2789716_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0
NZ_CP042432.1\|WP_132129065.1\|2784521_2786114_+\|sodium/solute-symporter	gnl\|CDD\|271360	cd10325, SLC5sbd_vSGLT, Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute binding domain. vSGLT transports D-galactose, D-glucose, and alpha-D-fucose, with a sugar specificity in the order of D-galactose >D-fucose >D-glucose. It transports one Na+ ion for each sugar molecule, and appears to function as a monomer. vSGLT has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP042432.1\|WP_132129076.1\|2798822_2799269_+\|hypothetical-protein	gnl\|CDD\|372314	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase. Members of this family belong to the PD-(D/E)XK nuclease superfamily. These proteins are transposase proteins.	1.10895e-12
NZ_CP042432.1\|WP_132129075.1\|2797859_2798414_-\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	2.48453e-19
NZ_CP042432.1\|WP_132129070.1\|2790830_2792135_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP042432.1\|WP_132129066.1\|2786323_2787676_+\|trigger-factor	gnl\|CDD\|272913	TIGR00115, tig, trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome. [Protein fate, Protein folding and stabilization].	3.27281e-46
NZ_CP042432.1\|WP_158640618.1\|2800021_2800543_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.58031e-09
NZ_CP042432.1\|WP_132129061.1\|2778917_2780180_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.26039e-78
NZ_CP042432.1\|WP_132129079.1\|2800953_2802513_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	7.926e-18
NZ_CP042432.1\|WP_132129077.1\|2799259_2799850_-\|uracil-DNA-glycosylase-family-protein	gnl\|CDD\|381683	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil may arise from mis-incorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations; thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other. UDG family 1 is the most efficient uracil-DNA glycosylase (UDG, also known as UNG) and shows a specificity for uracil in DNA. UDG family 2 includes thymine DNA glycosylase which removes uracil and thymine from G:U and G:T mismatches, and mismatch-specific uracil DNA glycosylase (MUG) which in Escherichia coli is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. UDG family 3 includes Human SMUG1 which can remove uracil and its oxidized pyrimidine derivatives from, single-stranded DNA and double-stranded DNA with a preference for single-stranded DNA. Pedobacter heparinus SMUG2, which is UDG family 3 SMUG1-like, displays catalytic activities towards DNA containing uracil or hypoxanthine/xanthine. UDG family 4 includes Thermotoga maritima TTUDGA, a robust UDG which like family 1, acts on double-stranded and single-stranded uracil-containing DNA. UDG family 5 (UDGb) includes Thermus thermophilus HB8 TTUDGB which acts on double-stranded uracil-containing DNA; it is a hypoxanthine DNA glycosylase acting on double-stranded hypoxanthine-containing DNA except for the C/I base pair, as well as a xanthine DNA glycosylase which acts on both double-stranded and single-stranded xanthine-containing DNA. UDG family 6 hypoxanthine-DNA glycosylase lacks any detectable UDG activity; it excises hypoxanthine. Other UDG families include one represented by Bradyrhizobium diazoefficiens Blr0248 which prefers single-stranded DNA and removes uracil, 5-hydroxymethyl-uracil or xanthine from it.	4.49172e-106
NZ_CP042432.1\|WP_132129064.1\|2781966_2784435_+\|glycoside-hydrolase-family-95-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	1.39437e-81
NZ_CP042432.1\|WP_158640617.1\|2780869_2781931_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99810	cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase. PA oxidoreductases of E. coli hydroxylate PA-CoA in the second step of PA degradation. Members of this group typically fuse a ferredoxin reductase-like domain with an iron-sulfur binding cluster domain. Ferredoxins catalyze electron transfer between an NAD(P)-binding domain of the alpha/beta class and a discrete (usually N-terminal) domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal portion may contain a flavin prosthetic group, as in flavoenzymes, or use flavin as a substrate. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria and participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	4.72586e-81
NZ_CP042432.1\|WP_132129062.1\|2780224_2780755_+\|DUF4142-domain-containing-protein	gnl\|CDD\|379301	pfam13628, DUF4142, Domain of unknown function (DUF4142). This is a bacterial family of unknown function.	3.90429e-47
NZ_CP042432.1\|WP_147698326.1\|2802538_2803591_+\|TonB-dependent-receptor-plug-domain-containing-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	6.38119e-48
NZ_CP042432.1\|WP_132129071.1\|2792318_2792990_-\|DUF4290-domain-containing-protein	gnl\|CDD\|379482	pfam14123, DUF4290, Domain of unknown function (DUF4290). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 221 amino acids in length. There are two conserved sequence motifs: EYGR and KLWD.	1.75283e-103
NZ_CP042432.1\|WP_132129072.1\|2792995_2795320_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP042432.1\|WP_147698327.1\|2803833_2805720_+\|TonB-dependent-receptor	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	5.89727e-53
NZ_CP042432.1\|WP_132129074.1\|2796815_2797817_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	1.24332e-56

>NZ_CP042432.1|WP_132129070.1|2790830_2792135_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MDSFEIIGGKPLKGEIIPQGAKNEALQVISAVLLSEEKITIENVPDIKDVNNLINLLEDLGVAVQRHGKGSFAFQAKTIDLDYLRSEEFKRKGAALRGSIMIVGPLLARFGKAWIPKPGGDKIGRRRLDTHFIGLQKLGARFDYDASESFFSLSATELKGTYMLLDEASVTGTANIVMAAVLAKGVTTIYNAACEPYIQQLCRMLTSMGAIINGIGSNMLSIEGVDKLGGASHRMLPDMIEIGSFIGLAAMTRSEITIKDVHYPELGQIPGVFRKLGIHFELRGDDIYIPSRDSYEIETFIDGSILTIADAPWPGFTPDLLSIVLVVATQASGSVLIHQKMFESRLFFVDKLIDMGARIILCDPHRANVIGLGRKYPLKGIEMTSPDIRAGVSLLIAALSAEGKSIIRNVSQIDRGYQDIEQRLQALGAEIKRV
>NZ_CP042432.1|WP_132129069.1|2789725_2790718_+|pyridoxal-phosphate-dependent-enzyme
MDYHANILGTIGNTPLVKINRLAEDIPALVLAKIETFNPGNSIKDRMALKMIEDAEKAGKLKPGGTIIEGTSGNTGMGLAIAAAVKGYKCIFTTTDKQSKEKIDALKAFGAEVIVCPTDVEPEDPRSYYSKSFQLEKEIPGSWKANQYDNVSNLIAHYEQTGPEIWEQTGGKVTHFIAGVGTGGTISGVGRFLKEKNPAVKIWGIDTYGSVFKKYKETGIFDKEEIYPYITEGIGEDFLPKCVDFDVIDLFEKVDDKDAALMTREIAIKEGIFVGNSSGAVIAGLRRLKGLLGPEDVVVALFHDHGSRYMGKMFNEDWLREKGFLEAKEG
>NZ_CP042432.1|WP_132129068.1|2788465_2789716_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MSKTNKDVRCSFCDARKQDVMMLIAGLNGHICDRCITQGYQILTEEFNNAPGKKKKPNSFDLNGIKPIDIKNHLDQYVIGQDDAKRVMSVAIYNHYKRLNQNQEKEEVEIEKSNILMVGETGTGKTLLARTVARILQVPFCICDATVLTEAGYVGEDVESILSRLLQAADYDVAAAERGIVYIDEVDKIARKSDNPSITRDVSGEGVQQALLKILEGTTVNVPPQGGRKHPDQKMISVNTQNILFICGGAFDGIDRKIAKRLNKHAIGYSAAREHFKIDDENLLQYITPVDLKSFGLIPELIGRMPVLTYLSPLDKETLLCILTEPKNSLIKQYKKLFEYEGIDLEIDREVLEFVVDKAIEFKLGARGLRSICEAILMDAMFELPSLSDVKRLHITLEYAREKFERSAEIRKLKAA
>NZ_CP042432.1|WP_132129067.1|2787746_2788442_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MINKDEFRKYAVKHRRISSIHVDKFISRVEDKLLPGNITPYIIEERQLNVAQMDVFSRLMMDRIIFLGDPIYDMTANIIQAQLLFLQSTDARRDIQVYLNSPGGSVYAGLGIYDTMQYIQPDVATICTGMAASMAAVLLCAGAEGKRAALKHARVMIHQPMGAAEGQASDIEITAREIGTLKEELYKIIAQHSKQTYEKVWESSDRDFWMKAEDAREFGMIDEVLLSSKPE
>NZ_CP042432.1|WP_132129066.1|2786323_2787676_+|trigger-factor
MNITQEKTGELNALVTINIEAEDYREQVEKAIKSYSKKVRIPGFRPGMVPKGHIKKLYGKSILLEEINNLLSDSLNNYISENKLEILGQPLPKAADDKEFKWDFGEAFDFSYELGLAPDFDAKFSDKDKFTLYRVKADEETVNNRIKNLRRGYGKVSNPEESAEGDVINGVFTQLATDKTVMEEGIEAPGTLRLELVEDKKILKSLTGLKEGDEVDIDLHKAFKEDASHKISHLLNIEEDIAKDLKSEFRLKVKGINRMEEAELNEEFFKKVFPEGDVSTEEEMREKVAKEVEDVMGSHADNKLQSDIYAHALEKFKIELPDDFLQRWLKATNENIPDEQIEKEYPDFAKNLRLTLLENKILKESGVEVKSEDIIALAKEKIAAQFRMYSANMPLTDEQLSEYAVNFLQDRERANQLYEEIRSKTVFEQVKSQVKLNEKEISYKDFLELK
>NZ_CP042432.1|WP_132129065.1|2784521_2786114_+|sodium/solute-symporter
MNFSNLDLTLFALYCLAIIVMGLYVSRKKRGHQTDSSDYFLAGKNLPWWAIGSALIAANISAEQFIGMSGSGYSIGLAIASYEWMAALTLLVVAKYFLPIYLKRGIYTMPQFLENRFDKRVKTSLAIFWVLLFVFVNLTSVLYLAGLAISTIFQINLMTAIIGLALFAAIYSLFGGFQAVAWTDVVQVVILVSGGLITAWIALDYVGDGNGLIAGLTKLYDLAPEKFNMILNRGEVIKPDGSDAYNDLPGLAVLIGGMWIANLYYWGCNQYIIQGSLGAKSLQQAQRGLAFASYLKMLLPLIVVIPGIIVFAMDIEISNMDEAYPILFDKFVPTGLKGIALAALVAAAASSLSAMVNSVSTIFTMDIYKDVFRKNASERQLVKVGRITAAVAFIIGILLAPQVAQLGSGGFQFIQKFTGYVSPGILSIFLFGLFWKKTTTRAALTVAVVLLPLSILVDKVLFPSMPFMNQMGLCFLILSALTVIISLVRPEDNTGKVVEFHKGFFKTDRVFNAAAIGVIILLAILYTVFY
>NZ_CP042432.1|WP_132129064.1|2781966_2784435_+|glycoside-hydrolase-family-95-protein
MKLYFTAALFFCVLTAFSQQSAAPELHRSGSRSPEPAGLELWYRQPASEWVEALPVGNGRLGAMVFGGVNTERIQINEESLWAGNRFNDNNPNALEVLDTVRKLLFADKNAEASAIAQENMVAVREEGSDSIARSFRSYQSLMDLHIDFGRENGSRPQHYKRSLDLVKGIAVTSYELDGVIFTEEVFASAPDDVLMIRLTASEPGKLNATFRFTRWDDDRKDSLKDCRVTTRGTNGLLLRGQVVDEAGERGPGGAHMKFAGLLRVMNKDGELLAGEGELVLRGASEAMLYITGATNYDFENLSLDPEKDPVAACDKDLDRLVRKKYVAIKAAHVSDHTGFMNRVSFHLGAESKENEGSGTVKADIPTDLRLENVKKGAEDQHLTELYFQYGRYLLLGSSRAPGLLPSNLQGIWNPHLNAPWQSDFHTNINLQMNYWPAEVGNLSETTAPLFAFMDKLRLPGRATAREMYGADGWVMHHCTDAFGKTGLQNSVWWGTFPMATGWMCLHFWDHYLYGKDESFLREKAYPIMKEHAAFLEDYLVEGPKGMLVTAPAYSPENRFIHPITGKEEYLTYAPTMDNQIIREFLQSCIKAANVLKEDKGLVQKWKGILARIPETKTGSDGRILEWIKEYKEAEPGHRHMSHVFGLHPGTQISPETPELFEGVRKTLEFRLKNGGGHTGWSRAWMINIYARLLDGEAAHFHLQKLFEKSTLSNLFDTHPPFQIDGNFGGTAGIAEMLLQSHLGKVELLPALPKAWQEGSVSGLRARGGLTVSINWEQSRLTGAKVRADQSGDYIVASGGREVTLRLKKGEEIALDEKLERK
>NZ_CP042432.1|WP_158640617.1|2780869_2781931_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MKGYLILRIRQIIRETPDAATFVLEQEDGSPVRYRAGQFLTLIFERHGKEVRRSYSLSSSPGIDAGLRITVKQMENGEFSRYLLSRLKPGDCLKALSPAGRFTFPDSFSGPADVFLLAAGSGIVPVFSILKMLLTSRPDLKITLVYSNYNEESTIFRKEIDALSRDYSQQFHYIHILSQPHRVAVNVIHGHLNNLLLERLVEKHLHFERSEALFFICGPFTYMRMVQITLRVAGFRDEQLRKENFVVNEPVPPRFTFPEGPYPKEVFLDVSGEAHRLQLSRGQTVLEAALQAGLNLPYSCKAGVCATCTARCSQGEVKMAVNEVLTSADLERGLVLTCVAFPVTQKVHIEIEI
>NZ_CP042432.1|WP_132129062.1|2780224_2780755_+|DUF4142-domain-containing-protein
MKTYKKTWMLPILSLLLCGSAYAFTAPAADTSGKKDAGFAKKAAAGGMFEVEAAELAKENGESQAVKDFAEMMIKDHTSVNEKLKGIAADKNIELPASLPEDKASKLETLSTLSGAAFDKAYAEEMVSSHEKTIALFEEEAESGEDPDLSGLAEESLPTLRHHLAEAEALKGEAGE
>NZ_CP042432.1|WP_132129061.1|2778917_2780180_+|MFS-transporter
MTARKITRNFRLYFYRQKALFHRNYRLFMAGQVLSLTGTWIQRLAMMWLAYQLTGSEFLLGMVAFCEQIPILLLAPLAGVYADRWNKHKALIYIEGFGMLQAILLGILTLAGMVNIWHIMVLSLCLGVINAFEIPIRQAFVVEMVDRNKKALASAIALNSTTFNLSRLVGPSVAGMLISAAGEGWCFLINGISYGAVMISLLLMRVSTSVYYSVSKEDVFSRLREGVRYIASRQGMRNLLLLLAVISFANASLRTLAPVFAQDILHGDAQTLGYLMSAAGVGAITGALYLTNSRSAGTMIRIISSTGILLGISIVCFAFSGMLVFSLLFIAIAGLSQMLHTASTNTLLQLYTDDDKRGRVMSFYTVCLQGTMPLGSLLAGSLAGIIGGPWAMALMGSICLGATFFYRKTRRAQTSPQNRH
>NZ_CP042432.1|WP_132129071.1|2792318_2792990_-|DUF4290-domain-containing-protein
MEKFTGPFEYNSTRPHLKLAEYGRNVQNMVDFVMSLPSKEERNLYAQAVIELMGQLNPHLRDVSDFTHKLWDHLFIISDFQLDVDSPYPVPSRESINNKPERLTYPSGRIKFRHYGKTVEMMIEKAKAIDDPERKSMYVNQLANFMKLAYITWNKDSVNDETIKSDLSILSGGELELEEGVNLSKVDPRTTRGNLRDKASAKSHQSNTGGGKKRYNQNGGKRY
>NZ_CP042432.1|WP_132129072.1|2792995_2795320_-|UvrD-helicase-domain-containing-protein
MNYLELLNPSQRSAVESTEGPMMIVAGAGSGKTRVITYRIAHLLQKGVDAFRILALTFTNKAAKEMRERVTSVTGDEARNLWMGTFHSIFARILRSEAELIGYPANFTIYDTDDSKSLIKAILKELMLDDKLYNPNFVYSRISSAKNNLISAKEYMESSQIQADDISSGRERMGEIYQTYVKRCYKAGAMDFDDLLFKTNVLFRDHPEALHKYQHKFRYIMVDEYQDTNFSQYLIVKRLAAVHQNICVVGDDAQSIYAFRGANIQNILNFEKDYPDLKVFKLEQNYRSTKNIVNAANSIIANNRDQLEKVIFSENEAGEKIKVIRTHSDNEEGKTVAASIMAEQASRGMNYNDFAILYRTNAQSRAMEEALRKLNIPYKIYGGLSFYQRKEIRDLISYFRLTVNHNDEQALKRIINYPVRGIGKTSMDKLVLAADEQDKSLWEVVENSKQYIGGRSGEAIQNFAIMIKSFAAMLKNQHAYEVAHHIASQSGLLKDLYNDKSIEGLSRYENIQELLNGIKEFSEREDIEDKSLTQYLQDIALLTGDDKVEEKEGDSDTVSLMTIHAAKGLEFPHVYVVGMEENLFPSQLSLNSRTDLEEERRLFYVAATRAEKKLTLTYATTRYRWGSLIHCEQSRFIDEVDPKYLELDIGSPAAAPDNTFFDDERKAWNNSPGSAGAGERLSFSRPKPKANNTPAKPVPATKHVPTANFTADDPAAIREGMEVEHEKFGFGTIVKLEGRLPDSKATVLFKDAGQKQLLLKFAKLRIVKNNDPIL
>NZ_CP042432.1|WP_132129074.1|2796815_2797817_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MLYVVITFLALSIILYFLLGGADFGAGIIELFTSQKNRGRTRKALYRAIGPVWEANHMWLIIAIVILFVGFPVMYTTMSVYLHIPLLIMLLGIIARGTAFVFRHYDAVKDEMQWLYNRIFVYSSFITPLFLGVLAGSLISGRINPDADSFAGAYIAGWLHPFSFAVGFFTVALCGFLAAIYLIGEANNAEDRRRFIIKARHMLIAAWLLGGLVFLTARLEAIPLQEWVFGNVPGLTAVILASLSLILLWYLLLRGKTQVLRVLAGFQVCMILFAVSYAHFPDFIIMQGGLTLSLFEHYSAPAIRGLGWALLLGSVLILPFLFYLFYSFQKKEE
>NZ_CP042432.1|WP_132129075.1|2797859_2798414_-|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MDAALKEIEDFAGKAHGAQRRKYKDEPYIVHPVRVMNICREYTASQPVLAAALLHDVLEDTPVRKKEIKAFLEGLFNPAETAETVMLVDWLTDIYTKDAYPKLNRKKRKVREAERLTKAPAAAQTVKYADIIDNAGDIAANDADFAKVFLRECRQLLKKMDQGDPRLYRRAEETVENCLNSLRR
>NZ_CP042432.1|WP_132129076.1|2798822_2799269_+|hypothetical-protein
MALRSADVSWTDTREPFGQVKWIFIQLPGFDKKPEELDSDLERWIYLMKQLHLIQKRPAFFNNTAFRKLFNVTEIDKLNPEEQKMYKLTIDADRNWRNVISYAKYEEKLIFAETLIRDTSFNDQKIAALVGVEECFVRQVRAKVSAYD
>NZ_CP042432.1|WP_132129077.1|2799259_2799850_-|uracil-DNA-glycosylase-family-protein
MKNLLNEIKSCMVCRDHLPNAPRPVVQVSENSKILIIGQAPGRKVQKSGIPWDDPSGDQLRTWLGVNKDQFYNEQLFALVPMGFCYPGKGTSGDLPPRPECAPLWHERLLRSMPNVKLTILIGKYAQDYYLVASKGVSLTDRVKNFNRYLPGYLPLVHPSPRNKAWHKKNPWFAQEVIPLLQKTVKETLESAAVQS
>NZ_CP042432.1|WP_158640618.1|2800021_2800543_-|helix-turn-helix-transcriptional-regulator
MKKRYPDYITAYIKAFGQNVKKIRLEKKLTQLQLANIADVERNHIYRLEKGHHGATLTTVIAVALALGKLPRELHEFYHKLPLNKDPEIPSSKHGENETTRLVRMLVYEEGFFDDEYRKAGDVVTHFRNQDKNLNSSAVSGALRTLWLNKVLDRLPGEKKGTFKYQKKKKSSE
>NZ_CP042432.1|WP_132129079.1|2800953_2802513_+|TlpA-family-protein-disulfide-reductase
MESKMAFMGRLCLPGSILHFLKIILTSILLAILLWSLTEASAQSEQSVASLPELKIGDKIPEEIWTLPLTVVNYPDGEKTITLNDYKGKLIVFELWATWCGPCVTTLPHVLDLQEHFKDEMVVLPVTAENRNLIASILKNSPSKGIEALRKRSFTTLVGDSVLYALFPTGSLPHTVVLGKDGRVKAITLPEYLNEETIQELLGGETPYIPQKVKKVTQLPPLLTFSLGGIQTYKPIYYSTIMGELDGVTGRMTNYQVDSANNRIRYIARNNPILLHYAFSGWNMAAMPSRRILEVSDPSKYTYYYDEVTGKGISYNLEWRRESRYTYEAVLPLSFTKESLFLKMREDLNNFFNVKARIEKREVECWVLKRFGDAKPSFISSGKGESLSVVNGSLYRRLKGDTLLGPADSGALTYVRNEKMNLFVINCLRHMDVFYGKRKQFAVPPIIDETGYTGKVDIDLPEKYTNLEDLRNILRPQGLDLVPEVREIEMFVITEPGNETSDSNELRLTKFGFVPARNL
>NZ_CP042432.1|WP_147698326.1|2802538_2803591_+|TonB-dependent-receptor-plug-domain-containing-protein
MKFKILLILYLALPCLALSQNATRIIEGQVIAEEDGRPLSGAAVHLTGNLKTVGTDANGRFRMEIPFDSTVTIICSYLGYLDTATRVHPETQSPVLIELRNDVALLDEVVVSTGYQQLPRERATGSFEYIDNELFNRQISTDVISRLDGITGGVLFDKRSGGSTRFNVRGLSTFLSEERPLIVLDNFPYEGDIQNINPNDIESVTILKDAAAASIWGTRAGNGVVVITTKKATYNQPFKLSVSSNVSVVQRPDLFYQSQMSSGDYIDAERFLFERGAYDADINNTRSRPVLTPVVEILNKQRNGLITEAEATRQINALRKHDVRKDLEEYFYRRAINQQYNMQLQGAVLI
>NZ_CP042432.1|WP_147698327.1|2803833_2805720_+|TonB-dependent-receptor
MEQAYRLSYLDTAGAGRLLDWKYRPLEELGLSDNTNKLQDLLFKFNARYQLFPFLNAQLNYQFERAVSEDRDYRSEETWFTRNMINRFTQIDGEATTYNVPLGGILDQSRDDLNSHALRGQVNAYHVWNQRHRLAALVGGELRDNRRRSDVNRTYGFDEDLLTYQSVDFINRYPIYDNLSSSSYIHDARSFYGTVNRFISVFGNASYTYDERYTLSASARRDASNLFGVETNDKWKPLWSAGIAWNVGNERFYNWKAVPDLKLRFTYGYAGNVNNSIAAVTTIEYRSVNQRLTPLTHAYVRNPPNPSLRWEQVRTINAGVDFTVKGDWLKGSFEYYSKKSTDLISRVSPTDATSGFTDLTVNSAILRTDGIDINLDIVPLDRAIRWGSQLLFSYNQHKVLKYLVEESSVSRMVGHGAVISPIEGHGAYDIVSHKWGGLDPATGDPRGYINGKLSSEDYRDLINDATLNDVVFHGSALPKYFGGFRNTISWKNISVSANITYRFSYFFRKPTINYNELYDRGLVGHGDYYLRWQQPGDELHTTVPSIGYPVNRYRDQFYQNSEVTVEKGDHLRLQDVHLSYDLSNEVWVSSPFRKLSLTFYARNLGIIWRANDVNLDPDYRSALPAPSA

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Crispr_ID: NZ_CP042432_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_18

2870594-2870913

Orphan

Consensus_repeat	Method
GGGGCGCGTTTCGCTTCGCTTACGCT	CRT

4 spacers

The CRISPR arrays of NZ_CP042432_18

>merge|NZ_CP042432|18|2870594-2870913|CRT
GGGGCGCGTTTCGCTTCGCTTACGCTACGAAGAGCGTAGGGGCGCGTTTCGCTTCGCTCACGCGTTTGGAATGCGGGGGGCGTTTCGCTTCGCTTACGCTTTTGCATGCGGGGGTGCGTTTCGCATGGTCGCTTTGCTCCATGCGTGGGCGCGTTTCGCTTCGCTTACGCTACGAAGAGCGTAGGGGCGCGTTTCGCTTCGCTCACGCGTTTGGCATGCGGGGCGCGTTTCGCTTCGCTTACGCTTTTGCATGCGGGGGTGCGTTTCGCATGGTCGCTTTGCTCCATGCGAGCGGGGGCGCGTTTCGCTTCGCTCACGCG

>NZ_CP042432|18|2|2870594-2870913|CRT
GGGGCGCGTTTCGCTTCGCTTACGCT	ACGAAGAGCGTAGGGGCGCGTTTCGCTTCGCTCACGCGTTTGGAATGC
GGGGGGCGTTTCGCTTCGCTTACGCT	TTTGCATGCGGGGGTGCGTTTCGCATGGTCGCTTTGCTCCATGCG
TGGGCGCGTTTCGCTTCGCTTACGCT	ACGAAGAGCGTAGGGGCGCGTTTCGCTTCGCTCACGCGTTTGGCATGC
GGGGCGCGTTTCGCTTCGCTTACGCT	TTTGCATGCGGGGGTGCGTTTCGCATGGTCGCTTTGCTCCATGCGAGCG
GGGGCGCGTTTCGCTTCGCTCACGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129139.1\|2875875_2876766_-\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|180269
NZ_CP042432.1\|WP_132129134.1\|2869934_2870438_+\|phosphoheptose-isomerase	unknown	unknown	gnl\|CDD\|380343
NZ_CP042432.1\|WP_132129136.1\|2872484_2873435_+\|arginase	unknown	unknown	gnl\|CDD\|212515
NZ_CP042432.1\|WP_132129135.1\|2871029_2872415_-\|arginine-decarboxylase	unknown	unknown	gnl\|CDD\|143503
NZ_CP042432.1\|WP_132129133.1\|2869292_2869772_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129142.1\|2880906_2882373_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760
NZ_CP042432.1\|WP_132129130.1\|2863879_2864566_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP042432.1\|WP_132129132.1\|2865651_2867670_-\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NZ_CP042432.1\|WP_132129138.1\|2875279_2875843_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366645
NZ_CP042432.1\|WP_132129126.1\|2858113_2860777_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP042432.1\|WP_132129128.1\|2861787_2863248_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP042432.1\|WP_132129131.1\|2864589_2865630_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|274368
NZ_CP042432.1\|WP_132129140.1\|2876829_2877447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129129.1\|2863253_2863781_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP042432.1\|WP_132129127.1\|2860896_2861784_+\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|226149
NZ_CP042432.1\|WP_132129255.1\|2867721_2868447_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP042432.1\|WP_132129256.1\|2883074_2884202_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|223234
NZ_CP042432.1\|WP_132129143.1\|2882449_2883064_-\|dethiobiotin-synthase	unknown	unknown	gnl\|CDD\|379223
NZ_CP042432.1\|WP_132129137.1\|2873434_2875213_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223097
NZ_CP042432.1\|WP_132129141.1\|2877675_2880888_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129139.1\|2875875_2876766_-\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|180269	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	5.79635e-150
NZ_CP042432.1\|WP_132129134.1\|2869934_2870438_+\|phosphoheptose-isomerase	gnl\|CDD\|380343	cd02213, cupin_PMI_typeII_C, Phosphomannose isomerase type II, C-terminal cupin domain. This family includes the C-terminal cupin domain of mannose-6-phosphate isomerases (MPIs) which have been classified broadly into two groups, type I and type II, based on domain organization. This family contains type II phosphomannose isomerase (also known as PMI-GDP, phosphomannose isomerase/GDP-D-mannose pyrophosphorylase), a bifunctional enzyme with two domains that catalyze the first and third steps in the GDP-mannose pathway in which fructose 6-phosphate is converted to GDP-D-mannose. The N-terminal domain catalyzes the first and rate-limiting step, the isomerization from D-fructose-6-phosphate to D-mannose-6-phosphate, while the C-terminal cupin domain (represented in this alignment model) converts mannose 1-phosphate to GDP-D-mannose in the final step of the reaction. Although these two domains occur together in one protein in most organisms, they occur as separate proteins in certain cyanobacterial organisms. Also, although type I and type II MPIs have no overall sequence similarity, they share a conserved catalytic motif.	6.18355e-17
NZ_CP042432.1\|WP_132129135.1\|2871029_2872415_-\|arginine-decarboxylase	gnl\|CDD\|143503	cd06830, PLPDE_III_ADC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase. This subfamily includes plants and biosynthetic prokaryotic arginine decarboxylases (ADC, EC 4.1.1.19). ADC is involved in the biosynthesis of putrescine, which is the precursor of aliphatic polyamines in many organisms. It catalyzes the decarboxylation of L-arginine to agmatine, which is then hydrolyzed to putrescine by agmatinase. ADC is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Homodimer formation and the presence of both PLP and Mg2+ cofactors may be required for catalytic activity. Prokaryotic ADCs (biodegradative), which are fold type I PLP-dependent enzymes, are not included in this family.	2.19583e-139
NZ_CP042432.1\|WP_132129136.1\|2872484_2873435_+\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	4.68603e-123
NZ_CP042432.1\|WP_132129142.1\|2880906_2882373_+\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	1.93016e-27
NZ_CP042432.1\|WP_132129130.1\|2863879_2864566_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.45183e-80
NZ_CP042432.1\|WP_132129132.1\|2865651_2867670_-\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	7.972e-12
NZ_CP042432.1\|WP_132129138.1\|2875279_2875843_+\|hypothetical-protein	gnl\|CDD\|366645	pfam01442, Apolipoprotein, Apolipoprotein A1/A4/E domain. These proteins contain several 22 residue repeats which form a pair of alpha helices. This family includes: Apolipoprotein A-I. Apolipoprotein A-IV. Apolipoprotein E.	0.000144736
NZ_CP042432.1\|WP_132129126.1\|2858113_2860777_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP042432.1\|WP_132129128.1\|2861787_2863248_+\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP042432.1\|WP_132129131.1\|2864589_2865630_+\|sensor-histidine-kinase	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	8.91716e-70
NZ_CP042432.1\|WP_132129129.1\|2863253_2863781_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	7.3594e-34
NZ_CP042432.1\|WP_132129127.1\|2860896_2861784_+\|TIM-barrel-protein	gnl\|CDD\|226149	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism].	2.25999e-30
NZ_CP042432.1\|WP_132129255.1\|2867721_2868447_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	6.06713e-52
NZ_CP042432.1\|WP_132129256.1\|2883074_2884202_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|223234	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism].	1.52165e-126
NZ_CP042432.1\|WP_132129143.1\|2882449_2883064_-\|dethiobiotin-synthase	gnl\|CDD\|379223	pfam13500, AAA_26, AAA domain. This domain is found in a number of proteins involved in cofactor biosynthesis such as dethiobiotin synthase and cobyric acid synthase. This domain contains a P-loop motif.	6.75564e-65
NZ_CP042432.1\|WP_132129137.1\|2873434_2875213_+\|arginine--tRNA-ligase	gnl\|CDD\|223097	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.7443e-141
NZ_CP042432.1\|WP_132129141.1\|2877675_2880888_+\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0

>NZ_CP042432.1|WP_132129134.1|2869934_2870438_+|phosphoheptose-isomerase
MHIEDQKAAIFRKTEKELQEKGFSIRQQDMTRPWGGFFVIEESQAQAFADAYFDGIKADDLKISGKLSPKILLVEPQKRLSWQYHHRRAEIWKVLNGTVGVVTSDTDEEGELKTLHPGDLITLKQGERHRLVGLDGWGVLAEIWQHTDALYASDEHDIIRLQDDYNR
>NZ_CP042432.1|WP_132129133.1|2869292_2869772_+|hypothetical-protein
MKKLFLTLTAIAGMLLSLQNTSFAQDAGTEYNTAIGLRVGDIDFRGVGITGKHFFSPNNAGEAILTFYDTAFFISALYEFHKEIPNAEGLKWLAGIGPFLGIPDGGGDAGFGVSPIVGLDYKINDVPLNFGLDWRPHFLFTPSTEFEASSLGLSIRYAF
>NZ_CP042432.1|WP_132129255.1|2867721_2868447_+|RluA-family-pseudouridine-synthase
MKIPPFKELILFENDDLITVNKPPFLSTLDERSGEGQSMLRLVKSYHEDAQICHRLDKETSGVLLIAKHSAAYRHFSMQFEHREMDKVYHAVLEGIHDFKDLRVNLPIQNLGKGHVKIDRREGKKAETIFNTVRLFRHYTLAECRPLTGRMHQIRIHLATQRAVICNDEQYGGKPVYLSSLKRNYHLGRGEEEQSIIMRFALHAFSLSFRLMDDEKKTVTAPYPKDFATLLKVLDKFDGIS
>NZ_CP042432.1|WP_132129132.1|2865651_2867670_-|right-handed-parallel-beta-helix-repeat-containing-protein
MNKILPLFAGCFFIYLLAGFNVRTNPVPLEKEITYYVSARGNDSGQGTKKLPFKTIQKARDVIRQLPADNRPSVTVLIQGGTYYLQHPVIFNKEDAGTESAPVIYKAVKGETPVFTGSVALDNWEPVKDQEVLQHVNPEIRRKLYVRDLAAAGITNYGDPAEKGRRPALYCNQQLQTLARWPNKGFTRSGKAKGKTPLPEVWTGEKGTKEGIFEYLDERIDKWATSPDIRLGGYWFWDWSEQYHEVERIDAGANTIYIRQPYHGYGYKDQLNFFGMNILSELDQPGEWYLDRRKGKLYWYPPVDMASSPTVSLTIYDQPYMVEMNDASYLQIEGLYFQESRGSGILIKGGSRNLVKNCSVERLGTDGIHIEGGSHHGVSGTYLGHLGYSGLRVIGGDRATLEPGGHYVEHCIVEHFSLFKRTYEPAVYMQGCGNSIRHNRFQYSSSSAMRLEGNDFLVEFNEIGHVVNESDDQGGLDAWYNPTYRGNIIRYNYWHDITGGSHAGAAGVRLDDMISGYTVYGNIFERCGSKNFGGVQIHGGKDNIIDNNLFLDCQYAVSFTLWGKDRWLRELDKPQMKKKLYEEVDITSPAYMQKYPELARLKENADVNILRNNLAIGAKSLFKNGQDQVAAGNHLISREEKKELSDYLSPRFLKSYGLQPIPFDKIGPQKKQ
>NZ_CP042432.1|WP_132129131.1|2864589_2865630_+|sensor-histidine-kinase
MIKNPTPRMLALFTALLIALVVGVLSIVYRLTFIQGLLVMAVVTLVAYILIYYSLEYFIYRKIKLIYKSIHQLKTQRTDSASVPYFGDSSDDPIAAVASDVQEWAEARKGEIETLKKTEEYRKEFLGNVAHELKTPIFNIQGYINTLLDGAMDDPEVLRHFLNKAAKSADRIADMVDDLEAISNLESGRESMEFEIFDINDLIKDVFDSLEYMASHKKIILDFKEGCNYTMIVEADKYRIRQVLVNLITNSIKYGRQNGKTLAGMYDMDENVLIEITDNGLGIGPEHLPRVFERFYRVDKSRSRIEGGTGLGLSIVKHIIESHEQTINVRSTPGIGTTFGFTLKKA
>NZ_CP042432.1|WP_132129130.1|2863879_2864566_+|response-regulator-transcription-factor
MTTGKQRILIVDDEPDILELIEYNLRKEGYQVFSAGNGQEAISMAKKVLPEMIILDIMMPKMDGIETCRTLRALPEFKNTFMVFLTARSEEYSEIAGFNVGADDYIAKPIKPRALLSRINAILRRNSNADESPADKLEIDDLVIDREAYLVFQAGRKTVLAKKEFELLYLLASKPGKVFSREVILKNIWEDSVVVTNRTIDVHIRKIREKLGDHYVTTIKGVGYKFEV
>NZ_CP042432.1|WP_132129129.1|2863253_2863781_+|TlpA-family-protein-disulfide-reductase
MLKPYVWILILVCFSCGGAGTREAEQAGKEIPVGTEVGQRAPEILLPDPDGKEIALSSLRGKVVLVDFWASWCAPCRRENPNIVAQYQKYKDKGFTIYSVSLDLKKEDWVKAIEKDHLGWPYHVSDLKFWYSEPAAVYGIDAIPANFLLDEEGLILARNLRGDQLSAFLNKMFSN
>NZ_CP042432.1|WP_132129128.1|2861787_2863248_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTGKVYSRYEAVIGLEVHAQLSTQSKAFSTDPAAFGGLPNTHVSPVSLGHPGTLPVVNEKLLEYAVKMGLATHCSIRKESFFARKNYFYADLPKGYQITQDTMPVCYDGFIRISLKDGSHKQLRIHRIHMEEDAGKSMHDQDQHNSLIDLNRAGVPLIEIVSEPDIRSGEEAGLYLAEVRRILRYLEICDGNMEEGSMRCDANISVRLKGEARLGTRCEVKNLNSIRNVQRAIDFEARRQIDILESGGSIEQHTLNFDPDSGETTPLRAKETANDYRYFPEPDMPPLLLTEEYIQEIRATLPMLPEEWQQKLINEYSLPEYDAQVLTESKRMVLYFESMTAETRNYKAAANWLMGPVKSFLNEEGLGMAGFPVPAASLAGLINLIDEGKLNYSVAAQTVFPAMLKDTSAGPASLIEKLGVGIDNSADQLTGFIEEVIARYPDKVKQYQSGKKGLIGMFMGEVMKLSKGKIDPKAANRLMAEKLEKA
>NZ_CP042432.1|WP_132129127.1|2860896_2861784_+|TIM-barrel-protein
MTISRRQALGKMAAGTAALMISDTLSGRLSAADKKLDPKMKGRINHSVCKWCFPDTSLEDLCKAGKELGLQSIELLTVIDFPLLQKYGLECGMVSGVPGGIPQGLNRMENHDKIVEFFEEHIPLVAASGFRIKNIICFSGNRDGMDEEEGLENCKKGLQRIMPLAEKHKVTVCMELLNSKVDHPDYMCDHTAWGAELAKSVGSESFKLLYDIYHMQIMEGDMIRTIRDNHQYIGHYHTAGVPGRNEIDESQEIYYPAVMRAIAETGFNGYVAQEFIPKGEDKLGALAAGIKLCDV
>NZ_CP042432.1|WP_132129126.1|2858113_2860777_+|alanine--tRNA-ligase
MTSNEIRSAFLDFFAAKGHEIVPSAPLVIKNDPTLMFTNAGMNQFKDIFLGVRSPEWPRVADTQKCLRVSGKHNDLEEVGYDTYHHTMFEMLGNWSFGDYFKKEAVSWSWELLTRVYGLPEDRLYVTIFEGDAGESLVKDEEALECWKQHIAPGRILEGSKKDNFWEMGDTGPCGPCSEIHIDLRPDAERALLEGKELVNRDHPLVVEIWNNVFIQYNRKADGNLEALPTKHVDTGMGFERLCMALQGKTSSYDTDVFQPLIRYIADRSGKEYGKDKMESVAMRVMADHIRAIAFAITDGQLPANTGAGYVIRRILRRALRYGFTFLGFKEPFLYQLTDVLAGQFNGVFSELTEQKEFVKKVIQEEEAAFLRTLAGGIQRFEKYAEELQATSAEAGQTAGEQAAGGKVEGAFAFELYDTYGFPVDLTQLLAREKGLEVDMEAYREALEKQKARSRTATAVDTGDWVELLPGIETAFVGYDKLECEARIVKYRKITTKGKEQYQLVLDQTPFYGESGGQVGDTGVLSNESGSVPIIDTKKENNLIVHFSETLPAQPEAGFRAIVDQAKRRDTAANHTATHLLHAVLKEVLGAHVQQKGSLVNPEYLRFDFSHFSRLTEEELAAVERLVNERIRENIPLEERRFVPYQDALEEGVTALFGEKYGDLVRVITFDPDFSRELCGGTHVAATGQIGFLKITSESAVAAGVRRIEAITAEKAETYVNTQLAVLKQGRDLLKNPSDLLKSLQALLQENQQLKKEKEQAVLQQAAGIKDELLAGMEELNGARLIARQVQIPSAEAIKSLAFELRSAVDNLFLVLGAELDGKAHLTVMISDALVKEKGLNAGAIVRELGKEIRGGGGGQAFYATAGGKDPGGLQKALDKARQFILP
>NZ_CP042432.1|WP_132129135.1|2871029_2872415_-|arginine-decarboxylase
MQSYQEFLDLSVGFPQEGFEVYEDELYFHDINLMELIETYGTPLKFTYLPIITKKIQQARLWFQRAIVNNNYRGKYRYCYCTKSSHFRHIVEEAFKNDIHLETSAAFDMSMIDALEKKGVLNKEVYVVCNGFKTQQYKQYIVDMIHDGFKNIIPILDNKEEFNFYDDELDMECNLGIRIATEEQPDSQFYTSRLGIRAEDIVDLYQNKIASHSNFKVTMLHFFINSGISDTQYYWNELEKCVTLYCKFKKVNPHLSMLDIGGGMPFKDSLIFDFDYEYMVNEIIKRIKEICAEHEVMEPDIITEFGKYTVAEASGILYKVLGRKLQNDREKWLMLDGSFITNLPDVWALNQRYILLPINNWDSEYERVNMGGITCDGQDYYNQEAHMNNVFMPKTRKVQYIGFFHTGAYQETLGGYGGIHHCLLPTPKHILIRRNRDETFNYEVFGEEQNSKQVLKILGYI
>NZ_CP042432.1|WP_132129136.1|2872484_2873435_+|arginase
MHKLKLIEVRSEIGAGTRGASLGPDAIRIASLDFSSRFFKRYPCVSIPDENHLLFESSGDRYAKRISGILTMTERIGEEVCRTLEKGEFPIIVGGDHSIAAGTVAGIRMAFPKIRLGVIWIDAHADIHSPYTTPSGNMHGMPNAISLDEDNLESTLNAPDQETLNFWYQLKNVGGICPKITYENIVMIGVRDTEPAEDHLLEKRGIRNFSAKEIRRAGVEKVAVETLKYLDDCDLIHVSFDVDVLDPSVSRGTGTPVPNGITIKEARTLVIRLMQSKKIGTFELVEVNPTLDRENLMAEQAFDILLRASNQLTHNI
>NZ_CP042432.1|WP_132129137.1|2873434_2875213_+|arginine--tRNA-ligase
MTITEFVAGITAETIAKLYQETIPASSVTLNETRKEFEGDLTVVTFPFTRFSKKSPEETARELGNYLQENYEEVARFNVVKGFLNLVISDRYWLERVKEMALSENYGAHSRNGQKVMVEYSSPNTNKPLHLGHVRNNLLGYSVSRILDAAGYDVIKSNLINDRGIHICKSMLAWLRFGDGESPATAGMKGDHFVGKFYVLFEKKFKEQVKGLMEVGMTEEEAKYASPLMREAQEMLRQWEEGEKEVVDFWKIMNGWVYEGFDVTYKKLGVDFDKIYYESDTYLLGKDIVNEGLEKGVFFRKPDGSVWIDLSGDGLDEKLLLRADGTSVYITQDLGTAQLKYDDYGMEKSIYVVGNEQDYHFKVLFLILEKLGKPWAGGLHHLSYGMVDLPSGKMKSREGTVVDADDLMVEMIDKARQNTLELGKANELPEAEKEELFRKVGMGALKYFLLRVDPKKRLLFDPNESIDMQGHTGPFIQYTYARIRSVLEKAGKREAAFNLEGLSLNADEKNLVILLNKFGEIIAEAAAEYNPAIVANYLYDLGKTFNKFYHDNSILKAEDPQLQQFRLGLSVITAGIISRGMALLGIDVPDQM
>NZ_CP042432.1|WP_132129138.1|2875279_2875843_+|hypothetical-protein
MNTLTSTAKMYDLLSVKIGKQTAETLLVFIRENIKEEMMHRINALATNENLFKVNGMLKDKINLVHTELKENIATVRAELKEDIAAVRTELKEDISAVRTALKEDIAAVRTELKEDIAAVRTELKQDIAAVRSELKEDISGVNTALTKEMGTLQVNVEKGFKQQFWLILVLFLPFYFTLILLVFRML
>NZ_CP042432.1|WP_132129139.1|2875875_2876766_-|3-hydroxybutyryl-CoA-dehydrogenase
MKKITIIGSGTMGNGIAHVFALHGYPVSLVDVSAGALEKAMQTIAGNLDRMIKKELITPEKKERALSAIRTFTTIDRATEDAGLVVEAVSEDPELKLSLFRQLDDLCPPDTILASNTSSISISRIAAATKRPEKVVGMHFMNPVPVMKLVEVIKGYATSGETCAAVMELAQNLEKIPVAVNDYPGFVANRILMPMINEAIYAVHEGVAGVKEIDTVMKLGMSHPMGPLQLADFIGLDVCLSILRVLFDGFGNPKYAPCPLLVNMVTAGVLGVKSGAGFYSYENGTKDAPVAGRFRN
>NZ_CP042432.1|WP_132129140.1|2876829_2877447_+|hypothetical-protein
MTRIFTCLFLLSIAGIPVSCKKTNPPEELQIENVTTIHPVQDLYYWSSGGKIPIAVDSSTVIINSDLDLTSLSNLLSSQLSNGLVLSELSENLFILKSEENLLQLIIEKGNLSAVKEVFSSYEFDGSFEMIPTGEILLELKNDVSIDNVLSNFGKQVELVKTKERNTFTIRATDLSDVISIANQIYEGGAVEWCHPDFIAPMELN
>NZ_CP042432.1|WP_132129141.1|2877675_2880888_+|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKKSLLYAFLLVCSTLTAWSQEQTISGKVTGEDGAPLPGASVLVKGTSVGTSTDLEGEFTLDVPEGAIIEVSFIGFLSEEINTAGQSQFQVTLAPDIHSLEEVIVVGYGTATRQSFTGTATQIDAEALEGKSYSDVSKALAGEAAGVRIINDSGQPGESATIRIRGAGSVNGNRDPLYVVDGVPYTGNVNAINPADIESLTVLKDASATAIYGARGANGVIVINTKKGQIGKSGIEIDVKTGTNMSLLPRYNTLSSPEQYIGLSWEALYNRGTFGTFEEPVDPIAFANSRLFSEDGISPKYNLWDVSDASDLIDPATGEVRPDVTREYDPENWEDHAFNASNRTEANLRISGGSEKTSYFTSFGYLTDKGYAINTDFERISTRININHQVKDWLSGSLNLGYAATDMNNGGQTEDSGSLFWFVDNMPPIYPLFLRDEEGNRIPDEIYGGDQYDYGDGRGFAGLTNSIADTYYNIRNTKRHELNTNAFLKADITPNLSAEVRFGNQYFNSDNNQQDNPFYGSAASQGGSIFKLKTERLSYNFQQMLRYRTDIGEHHIDALAAHESNLWETKSLSASKFNMVDPGGIEFDNAVGSNPPESFTDKFTLESYFGQVNYDFKDTYFLSATVRRDGSSRFLKDKWGTFGSVGAAWLISNEAFMSNQTIFENLKLKASYGLIGEQGGVGYYPGYDLFTVSNLDGGISLAFDTKGNPDLTWETSKMFQAGVEFSLGKYLDGAIDYYVKNTDDLIFDRRVGPSIGYALIKVNDGALRNQGLEFNLLAHLVQNEDFYLDFGINGEMVKNKMTRMPIDPATNEEKHINIDGYYGQAKGHSIYDFYLREWAGVDAEDGRAMWNQYFYDTDGDGALGEDEEIILSLYDSRLENADRADQIAMTTTKNYTQATEKFIDKSAFPTVRGAFSLHTGYKGFELSAQFLYAVGGYAYDFVYARLMANEQIGNNNWHEDILNRWQEPGDITDVPRLSDDLDPNVGSSSSKYVTKASFLNLNNIMLRYTIPSQIVERWGVANLNIWVSGDNLWLLSERKGFNPSTNEAGESDWYRYSPLSTFTAGLGVRF
>NZ_CP042432.1|WP_132129142.1|2880906_2882373_+|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKAYIKHFIPVIASAMLVAGCGKDFLETEPTEFISAQQIKDATEKNPDIQAGSIAGLYSTMYTPGTGGTDLNHDDFGQKGWDIYMDLISSDMVLGGTVYGWYSSLARLQATTDYTRDECYMPWRYYYRIIFGANIVIDGLGGNDAALESDEARYYMGQAKAMRAYGYFYLANLYARSYDPSEPILPIYTDLEAPNQPKSTTQEVYDLIISDLTEAIELLDGFSRQSKSQINQSVAKGLLAYAYATTGQYDLAMQEAQDIVQSGNFPLMDEAAVTGGFNDINTAGWMWGVDITLDNGLDLVSWWGQVDIYTYSYAWVGDFKAIDKNLYDAIPDNDVRKAQFGNEDDYKLVPIGKFYDPGKTQGGQRNVTTDYVYMRVAEMYLLLAESAARSGNEQVARETLKDLLEERIPDASYVDALSGQALLDEIYLQTRIELWGEGKSYLAMKRNKATITRGPNHLSLAGQSFSFDDERLTLSIPQVEIQNNPQID
>NZ_CP042432.1|WP_132129143.1|2882449_2883064_-|dethiobiotin-synthase
MKPLFVTGIDTGIGKTIVSAMLVEKLQADYWKPIQSGDLDQSDTLKVRSLVSNAVSRFHPETYRLTQPFSPHKSAAIDGIEITLESFRTPQGSRPLIVEGAGGLMVPLNIKDLMIDLIRCLEAEVIVVSKNYLGSINHTLLTLEMLKAKSLPVRGLIFNGKPDTDSEKIIQRFSEVKYLGRVPEMPLLNRESIRAAAKAISFLP
>NZ_CP042432.1|WP_132129256.1|2883074_2884202_-|8-amino-7-oxononanoate-synthase
MHRHLEQKLRERFSENKYRRLSCNSGMADFCSNDYLGFARSPALQAKIRDELGKHPGYPAGATGSRLLSGNSTYAEHLEEEIALFHHAQAGLIFNSGYAANLGLFSAIARRGDTVICDELAHASIIDGIRLSGANRYTFSHNDTGSLEQKLKQAEKGPGRIFIAVESIYSMDGDKAPLEKITSLTEKHNAALIVDEAHAGGIFGKNGRGLVPLWGLEEQVFARIYTFGKALGSHGAIITGSKTLKDYLVNFARPLIYTTALPFHNLASIKCAYELLIDRTGLQKELDAKIALFKTLAKGIRGIIPMDGPIQTVTVPGNKAVREAAGQLQASGLDVRPILSPTVPEGKERIRICLHLYNTEEEIKKLTGLLTTILT

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Crispr_ID: NZ_CP042432_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_19

3257947-3258047

Orphan

Consensus_repeat	Method
AACCATTGCGAAGCAACGTTAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_19

>merge|NZ_CP042432|19|3257947-3258047|CRISPRCasFinder
GGCGATCGAAAAGCAACGTTAAACTTTGAACCGTTGCGAAGCAACGTTAAACTTGAAACTTGAAACTTAAAACTTTAAACCGTTGCGAAGCAACCTTAAAC

>NZ_CP042432|19|17|3257947-3258047|CRISPRCasFinder
GGCGATCGAAAAGCAACGTTAAAC	TTTGAACCGTTGCGAAGCAACGTTAAACTTGAAACTTGAAACTTAAAACTTTA
AACCGTTGCGAAGCAACCTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132128981.1\|3267237_3268176_-\|hydrogen-peroxide-inducible-genes-activator	unknown	unknown	gnl\|CDD\|176103
NZ_CP042432.1\|WP_132128974.1\|3253999_3254467_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP042432.1\|WP_132128968.1\|3248330_3249479_-\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP042432.1\|WP_132128977.1\|3259979_3261869_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP042432.1\|WP_132128998.1\|3259198_3259780_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|223675
NZ_CP042432.1\|WP_132128997.1\|3254969_3256019_-\|nucleoside-hydrolase	unknown	unknown	gnl\|CDD\|239118
NZ_CP042432.1\|WP_132128972.1\|3252942_3253389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_147698340.1\|3270479_3271346_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP042432.1\|WP_132128967.1\|3246195_3248313_-\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_CP042432.1\|WP_132128975.1\|3256154_3257942_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP042432.1\|WP_132128969.1\|3249484_3250789_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|236376
NZ_CP042432.1\|WP_132128971.1\|3251520_3252930_+\|phosphoglucomutase/phosphomannomutase-family-protein	unknown	unknown	gnl\|CDD\|100093
NZ_CP042432.1\|WP_132128978.1\|3261886_3262708_-\|3-deoxy-8-phosphooctulonate-synthase	unknown	unknown	gnl\|CDD\|235363
NZ_CP042432.1\|WP_132128979.1\|3262895_3265088_-\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_CP042432.1\|WP_132128973.1\|3253385_3254003_+\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP042432.1\|WP_132128976.1\|3258174_3259059_+\|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|184556
NZ_CP042432.1\|WP_132128980.1\|3265193_3266147_+\|KpsF/GutQ-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|182814
NZ_CP042432.1\|WP_132128999.1\|3266146_3267229_+\|mannose-1-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|133003
NZ_CP042432.1\|WP_132128982.1\|3268279_3269764_+\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP042432.1\|WP_132128970.1\|3250909_3251395_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132128981.1\|3267237_3268176_-\|hydrogen-peroxide-inducible-genes-activator	gnl\|CDD\|176103	cd08411, PBP2_OxyR, The C-terminal substrate-binding domain of the LysR-type transcriptional regulator OxyR, a member of the type 2 periplasmic binding fold protein superfamily. OxyR senses hydrogen peroxide and is activated through the formation of an intramolecular disulfide bond. The OxyR activation induces the transcription of genes necessary for the bacterial defense against oxidative stress. The OxyR of LysR-type transcriptional regulator family is composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The C-terminal domain also contains the redox-active cysteines that mediate the redox-dependent conformational switch. Thus, the interaction between the OxyR-tetramer and DNA is notably different between the oxidized and reduced forms. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.87294e-64
NZ_CP042432.1\|WP_132128974.1\|3253999_3254467_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	1.80266e-05
NZ_CP042432.1\|WP_132128968.1\|3248330_3249479_-\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	6.35519e-157
NZ_CP042432.1\|WP_132128977.1\|3259979_3261869_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.71361e-43
NZ_CP042432.1\|WP_132128998.1\|3259198_3259780_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|223675	COG0602, NrdG, Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones].	8.71198e-44
NZ_CP042432.1\|WP_132128997.1\|3254969_3256019_-\|nucleoside-hydrolase	gnl\|CDD\|239118	cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. .	3.88693e-65
NZ_CP042432.1\|WP_132128973.1\|3253385_3254003_+\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.85278e-29
NZ_CP042432.1\|WP_147698340.1\|3270479_3271346_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.04368e-29
NZ_CP042432.1\|WP_132128967.1\|3246195_3248313_-\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.42242e-62
NZ_CP042432.1\|WP_132128975.1\|3256154_3257942_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP042432.1\|WP_132128978.1\|3261886_3262708_-\|3-deoxy-8-phosphooctulonate-synthase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	8.15748e-169
NZ_CP042432.1\|WP_132128971.1\|3251520_3252930_+\|phosphoglucomutase/phosphomannomutase-family-protein	gnl\|CDD\|100093	cd05800, PGM_like2, This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.	0
NZ_CP042432.1\|WP_132128979.1\|3262895_3265088_-\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP042432.1\|WP_132128969.1\|3249484_3250789_-\|aspartate-kinase	gnl\|CDD\|236376	PRK09084, PRK09084, aspartate kinase III; Validated.	5.03527e-122
NZ_CP042432.1\|WP_132128980.1\|3265193_3266147_+\|KpsF/GutQ-family-sugar-phosphate-isomerase	gnl\|CDD\|182814	PRK10892, PRK10892, arabinose-5-phosphate isomerase KdsD.	2.72938e-99
NZ_CP042432.1\|WP_132128999.1\|3266146_3267229_+\|mannose-1-phosphate-guanylyltransferase	gnl\|CDD\|133003	cd02509, GDP-M1P_Guanylyltransferase, GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose. GDP-mannose-1-phosphate guanylyltransferase, also called GDP-mannose pyrophosphorylase (GDP-MP), catalyzes the formation of GDP-Mannose from mannose-1-phosphate and GTP. Mannose is a key monosaccharide for glycosylation of proteins and lipids. GDP-Mannose is the activated donor for mannosylation of various biomolecules. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase and mannose-1-phosphate guanylyltransferase. This CD covers the N-terminal GDP-mannose-1-phosphate guanylyltransferase domain, whereas the isomerase function is located at the C-terminal half. GDP-MP is a member of the nucleotidyltransferase family of enzymes.	4.04481e-134
NZ_CP042432.1\|WP_132128982.1\|3268279_3269764_+\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP042432.1\|WP_132128976.1\|3258174_3259059_+\|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|184556	PRK14185, PRK14185, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	6.78367e-140

>NZ_CP042432.1|WP_132128975.1|3256154_3257942_+|elongation-factor-4
MKNIRNFCIIAHIDHGKSTLADRLLQITHTISERERQEQQLDDMDLERERGITIKSHAIQMKYQLDGEDYTLNLIDTPGHVDFSYEVSRSIAACEGALLIVDATQGIQAQTISNLYLALEHDLEIIPILNKMDLPGAMPEEVKDQIIDLIGCKAEDIIPASGKTGMGVPEILKAIIDRIPPPEGNPKAPLQAMIFDSIFNSFRGIIAYYKVANGEIRKGDRVKFVNTGREYIAEEVGVLRLQRQPKDVLAAGEVGYIISGIKDAREVKVGDTITQVLNPCSEAIKGFEVVKPMVFAGIYPVDTEDYEELRDAMDKLQLNDASLVFEPESSAALGFGFRCGFLGMLHMDIVQERLEREFDMTVITTVPNVSYKAYSTRGDLTVVNNPADLPDVNKLDFVEEPFIKASVITKSEYIGPIMTLCIAKRGIVVNQHYLTADRVELIFEMPLAEIVFDFYDKLKTISKGYASFDYHPIGYRQSSLVKLDIRLNGEPVDALSSLIHRDRAYDFGKKICEKLKELLPRQQFEIVIQASIGAKVIARETVRALRKDVTAKCYGGDISRKRKLLEKQKKGKKRMRQVGNVEIPQSAFMAVLKLD
>NZ_CP042432.1|WP_132128997.1|3254969_3256019_-|nucleoside-hydrolase
MTRMAAFCLPVIIGLLNSCANYKQQQQSRNAMKDLPLKVIFETDMGNDIDDALALDMLYKYADRGKIELLGISTNKNSPYSVQFLDLMNTWYGYPRIPLGNVIGGADSEGDAKNYTQVVSEYAVDGKPVFKRSVENYAKVPGSVELYRKILSEQPDSSVTIISVGFSTNLDRLLASPPDKYSTLNGRELVARKVKLLSIMAGNFRKEKQVEYNVVKDPAAAREVFASWPGKIIVSPFEVGEQVLYPASSIENDFPAEPPHPLVLAYESYLEMPYDRPTWDLTSVLYAVEGSEGYFDLSPPGTVSVDENSFTHFREDPDGKHRYLLMNSRQAVAVKDRFIELINPRNLEK
>NZ_CP042432.1|WP_132128974.1|3253999_3254467_+|cytochrome-c
MMRSLLILAAILCLFGACDNKQELKKKKYIAEGMVLYRNHCQNCHQTNGTGFEKLIPPLTDTLYLRLNRDRLACIIRYGMDEAITINGQVYNQPMVPNEKLTDMEIAEILTYITNAFGNSQEMFTIREVRLALQSCGEAGVESEAGIESNAGIQP
>NZ_CP042432.1|WP_132128973.1|3253385_3254003_+|SCO-family-protein
MRIFVILAGIALLCGCSSGKDKKLPILGRQEISGNDTLYQRIADFRFMNQDSAWISNETFAGKAYVADFFFTSCPSICPIMKKQMLRVYKTFKGNSGISFLSHTIDPRHDSVPVLHEYAADLGVSSDQWHFVTGTRDSVYSLAEKSYMVATLEDETAPGGFIHGGHFILVDKNRHIRGIYDGTSEESVDQLIKDIPLLLNEGTAE
>NZ_CP042432.1|WP_132128972.1|3252942_3253389_+|hypothetical-protein
MKILYKALLLAAVAFLAGCQPGTNEADALKSEVIKVHDRIMPRNSELLAAKRDLIKVISSLDSLKQAKPETDTASIHQQADSLLQSLDAADKAMSDWMYAFKTDYSEMGQQQVMDYLEAEKTRITGIEEAYEASIGGARSLLDSIDKK
>NZ_CP042432.1|WP_132128971.1|3251520_3252930_+|phosphoglucomutase/phosphomannomutase-family-protein
MTKIKFGTDGWRAIIADEFTVENVQRVAYATALWLKDNASAPAAVVGNDCRFAGKLFSATVARVFASQGIKVFLAGNEFVSTPMVSLGTVKLETDLGIIITASHNPPSYNGFKIKANYGGPATPDIIDSVESRIPESVSLELNSLEEYQQEGLIEEVDLETLYCDHIQSSFDLEAIRGSGLKLAYDAMYGAGQNVMRRLFPEITFLHAENNPGFDGQAPEPIHKNLSELSEMIKLSGNIDSALATDGDADRIGFYNGKGEFVDSHHIILLLIQYLHKYQGLSGEVVTTFSCTGKIAALCSKYNLPHTITKIGFKYICDLMVNSGKSYLVGGEESGGIAVSGYLPERDGIWIGLTLWEYMAKTGRSLDDLIDDLYAEVGSFAVERYDLHVSEALKQQIIENCRSGKYTAFGKYGVIRTEDMDGYKFHFSDDSWVMIRPSGTEPVLRVYAEAASSDEAFSVLDATKAVLLG
>NZ_CP042432.1|WP_132128970.1|3250909_3251395_-|hypothetical-protein
MMKKIIPLLALAATLSGCAALQNKAPDYRKMMVGNWMLDDISVEGQEGSFKVTLFNEAPLECFSGSAWTLTRPNSLGTYVLNEGVDCQAGLQREIRWTIYKTGTGEQQFQFKRLDAEGDPMDNNVGYRLDILSLDASGMQLRDEVTVNGQPLYLVYTFSRQ
>NZ_CP042432.1|WP_132128969.1|3249484_3250789_-|aspartate-kinase
MKVLKFGGTSVGNPERIRNLMSLINRDERQIVVLSAVAGTTNDLVSICREYAEGRNPAALIDSLNGKYEDFIGDLFVSNEFRVKAKELIDAHFATISSFSAGVFTPIHERVILAQGELLSTHLFHYHLQELGIPSVLLPALDFMKINEESEPVMPSISEKLKELLAKHPANNIFITQGYICRNSFGEIDNLKRGGSDYTASLIGAALLAEEIQIWTDIDGMHNNDPRVVKNTRPIAQLSFEEAAELAYFGAKILHPQSVFPAQKYKVPVRLLNTMQPDAPGTIISDQRSEGEIKAVAAKEGIYAIKIQSSRMLLVYGFLRKVFEVFERYKTPIDMVTTSEVAVSLTIDNTKYLSEITEELEAYGQITVDREQTIICVVGDFVASKAGIAARVLDTLKHIPLRMISYGGSRNNISILLDTAYKNEALQSLQRLFN
>NZ_CP042432.1|WP_132128968.1|3248330_3249479_-|diaminopimelate-decarboxylase
MFTAARLARFQQEETPFYFYDMDLLRQTVAACRTASEKRNFHVHYALKANVNNELLGIIREAGFGADCVSGGEVEKALENGFRKDQIVFAGVGKSDREINYALDQDIFCFNVESVQELEVINELARARNKRARIALRINPNVNANTHHYITTGLEENKFGINSWEFDTVVEKLRSLENIDCAGLHFHIGSQVTDENVFKSLCVKVNEFKEWFAERGVYFKLLNVGGGLGVDYHAPDVQPIVDFERHFAIFEQFLELDAGQEVHFELGRALVAQCGSLITKVLYIKKGINTNFAVVDAGMTELIRPALYHAYHKIENISASSAESVKYDVVGPICESSDCFGKEVELPETSRGDLMAIRTAGAYGEVMTSSYNLRPKIRPLFL
>NZ_CP042432.1|WP_132128967.1|3246195_3248313_-|cation:proton-antiporter
MLLLFDFSLPLTDPVLVFSLVLFIILFSPIILKRLRIPSLLGLILAGILVGPNGFNILMLDSSIVLFGTVGLLYIMFLAGLELDMNEFKKSRHRSVIFGLLTFAIPMLVGLPVCYFLLDFDPVASVLISSMFATHTMVAYPIASRFGITKNEAVTISVGGTIVADTLVLLILAVITGTTEGTLNTQFWIRLIISLAIFIAIVFIGFPIIGRWFFKKIEGEKTSQYIFVLAMVFLAGFLAELAGVEPIIGAFMAGLALNRLIPHTSTLMNRIEFVGSALFIPFFLINVGMMVDMTVIFSGQRALVVAGVLTVVAIFSKWLAAWVTQVVFKYSGVQRNLIFGLTSSRVAATLAVILIGYNLGIVNENVLNGTILLILVTCLIATFATESAARKLVILESNKKQELPEMHERILIPLANPATVEERIDYALYISDKASSEPIYPLAVVRDDEEAREKLLESGKMLEKALKHASAAETPVELLTRVDLNVSNGIVRAAKEHLITHIIMGWVERSATDRFFGSILDNLLNGSGQMVSVVRFNQPLNTLRRMVLVVPRNAQLEAGFNRWIKKVKNLSRQSGADMIVYCHGDLNNLLRNLLVEKKPAVSAVFKSLDDLDDILVVSKDLKEDDMLVVVCARRGTISYQSNMDIIPSKVNRHFPGNNIIIIFPEQNSDLNYPRFESEGFEISPIQENLERISKLGRSMRKMFKS
>NZ_CP042432.1|WP_132128976.1|3258174_3259059_+|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MGILDGKKAAEYYKEEIAREAAEFTRRTGKKPYLVTILVGNNGASETYVASKLRNSEKVGFNASLVRFEDTVTEEALLGKIDELNASEEVDGILVQLPLPAHIEEKKVIMRISPLKDVDGFHPESLGKMLIGLPTFLPATPYGIMELLDYYKVETEGKHCVVMGRSNIVGTPISLLLSRQGNPGNCTVTITHSRTKDLETITRQADILIVAVGRPEFVTADMVTEGAVVIDVGIHRIADKNRKSGYRLVGDVKFDEVAPKCGGISPVPGGVGLMTIVGLLKNTLEAAKRRTLPS
>NZ_CP042432.1|WP_132128998.1|3259198_3259780_+|7-carboxy-7-deazaguanine-synthase-QueE
MEEFYTIQGEGYNTGKAAYFIRLGGCDVGCHWCDVKESWDAALHPLTAADTIVANAARHPARAVVITGGEPLLYNLDYLCNELRKKGIKTFIETSGAYPLSGSWDWICLSPKKFKKPVPEILSLANELKVIVFNKSDFGWAEEHASHVSSLCKLYLQPEWSKAEETTPLIIDYVKENPRWQISLQTHKFMNIP
>NZ_CP042432.1|WP_132128977.1|3259979_3261869_+|OmpA-family-protein
MKRLLLLFCVSFTFFHTLAQSTNSKKALQAYETAQQHIGGKEYTQALNELYKAIQEDPGFIEAYQVLGDIFRIQENHVNAVTNYRKVLEIKPDFSARTRYGLGVSLFHLEKYAEAKEQLKKFLQDGNPGSQELARVKKYIANCGFAETAIKSPVAFEPVNLGETVNSIHDEYLPAITVDGSTLVFTRKTQQGEDFYTSSRSDSTWSRAVFLSEVINTPVYNEGAEALSADGRTIYFTICAKPGGMGSCDIYYSRFNGSQWSAPLNLGHPVNSPAWESQPSLSPDGRTLYFASNRAGTLGGIDLWKSVLQEDGSWSKPVNLGPHINTPWEEQSPFIHPDNKTLYFTSEGWPGMGGKDIFFSRKKDGEWQKAENIGYPINTVKDESSLIISAGGKTAYFASNSLKGLGAYDLYTFEMPPEARPGFVSYVKGLIYDEATNAKLSARVQLINTANKEIVFESGSNELTGEFLASLPAGNNYAFNVSKPGYLFYSGSFFLEDLSASDPFRLDVPLKKIAKGEKIVLQNVFFETDSYKLKPESYAELDKIIEFMKQNPRVVIELSGHTDDVGTGEHNQQLSENRAKAAYAYLVRGILQPERFVYKGYGESQPLAENTTEEGRAKNRRTELKIVSE
>NZ_CP042432.1|WP_132128978.1|3261886_3262708_-|3-deoxy-8-phosphooctulonate-synthase
MISQLPHIKFSDSNNFFLIAGPCAIEGEEMALRIAERITTITDRLNIPYIFKGSYRKANRSRLDSFAGIGDEKALKVLGKVSAEFDLPTLTDIHEPGEAAMAAEYVDVLQIPAFLCRQTNLLVAAAETGKFVNIKKGQFLSAGAMKHAVTKVTESGNPNVILTDRGTMFGYQDLIVDYRGLVEMKGFNVPVVMDCTHSLQQPNQESGVTGGRPALIDTIASAAIAVGADGLFIETHFDPANAKSDGANMLHLDLLEGLLEKLVRIRRALQARD
>NZ_CP042432.1|WP_132128979.1|3262895_3265088_-|DNA-helicase-RecQ
MSEVKRSLFDNLNSFFGFDKFKGDQEAIITNILSGNDTFVIMPTGGGKSMCYQLPALMSDGTAIVISPLIALMKNQVDQVRAYGSDDSIAHFLNSSLNKGEILQVKKDVVEGKTKLLYVAPESLSKPENIDFLNKAGISFVAVDEAHCISEWGHDFRPEYRKIRSVISQLGENTPIIALTATATPKVQQDILKNLQMQDATIFKSSFNRNNLYYEVRPKKNPNKEIIKYIKGMQGKSGIIYCLSRKKVEEVAETLNVNGIRALPYHAGLDAKMRAATQDKFLMEEVEVIVATIAFGMGIDKPDVRFVIHYDMPKSMEGYYQETGRAGRDGGEGHCIAFYDEKDIDKLAKFMKDKPVSEREIGTQILKEVVNYAESAVCRRKQILHYFGESYNEAACNNMCDNCRHPGEKFEAEQELLTVLKLIKKLEENFDEDHLVKILVGVDTPQTIKYQHNKLPEFGKGREQGELTWKSVLRQAVLNNFLIRDVDNYGLLKLSKFGTSYIGAPYSIKFVMNKDMDIDQARDSSDHNGPGGALDEVLLGALKELRKKIARQRNLPPFVIFQDPSLEDMATHYPVSMEEMKHISGVGAGKAMRYGGPFIELIKNYVEENEIDRAQDLTVRSTANKSGNKIFIIQNIDRKIPLEDIADSKGLSYQEILHEIETIVSSGTRLNLDYYIDDIIEEDRQDEVYDYFRSAEADSIEAALNELGETDYSREELQLLRIKFLSEFGN
>NZ_CP042432.1|WP_132128980.1|3265193_3266147_+|KpsF/GutQ-family-sugar-phosphate-isomerase
MHILESARRTLQIESEAILKLSQLLNNDFEKIVSLLLHLKGRVIVTGVGKSAIIAQKIVATFNSTGTPAIFMHAADAIHGDLGIIQEADAVLCISKSGNTPEIKVLVPLLKRGGNLLIAMVGELNSFLAREADYILNTSVDQEACPHNLAPTTSTTAQLAMGDALAICLLEQRNFGPGDFAHYHPGGALGKKLYLKVGDIAKNNEKPSVAASGSIREVIMEISSKRLGMVAVMENGELAGIITDGDLRRMMEKTTDLSVLKARDIMSLHPKTIDWNEMAVKAVEIIKKHSISALLVTKEGKYAGVVHFHDLIKEGII
>NZ_CP042432.1|WP_132128999.1|3266146_3267229_+|mannose-1-phosphate-guanylyltransferase
MNKNFYAVIMAGGIGSRFWPVSRQNRPKQFIDILGAGKTLIQLTYERFSKICPPENIYIVTNESYRDTVREQLPDIQDEQVLCEPIMRNTAPCIAFACYKIARLNPDAVTVIAPSDHLILKEDLFGDSIEKAMTTALGQNVLLTLGIVPSRPDTGYGYVQYTEKKLNEHFHKVKTFTEKPNLELAQTFIRSGDFLWNAGIFIWNVKALKGAFERFLPEMHEIFQEGAPYFNTKKEADFIRTAYAQCTNISIDYAIMERADNVYVMPGNFGWSDLGTWGSLHSVKEKDERSNAINGKQVMTYETSDCMVHVPENKLVILQGMENFIVVDTGDVLMICKKSAEQQIKQIAGDVRQKEGDKFS
>NZ_CP042432.1|WP_132128981.1|3267237_3268176_-|hydrogen-peroxide-inducible-genes-activator
MTIVQLEYILAVDTYRNFARAAEKCFVSQPTLSMQLQKLEEELGEKLFDRSKQPVIPTERGLKVIEQARNVLREFQKIPEIIKESRGEVSGELRLGIIPTVAPYLLPLFITDFLEKYPKVSLVIEELVTGEILKRLANDSIDAGIASTPLQEPVVQEIPLYYEPVVAYVSAAHPLYEREWISSSELETQDLWTLGEGHCFRSQVVNLCRKSPAKNEAGSLEYQNGSMEFLARLADMTGKITLLPEMATYGWPEERKRAIRPMEGRSPVREISMIIQRNHAKRYIIDLLRQSILSHIPPALKEAAGSERIEWK
>NZ_CP042432.1|WP_132128982.1|3268279_3269764_+|catalase
MTDKKLTTASGRPVADDQNSLTAGPRGPVLIEDYILHEKMAHFNRERIPERIVHAKGSGAFGKFTVTHDLTAFTKAKLFSEVGKETKVMVRFSTVGGEKGSADTERDPRGFAVKFYTEDGNWDLVGNNTPVFFIKDAYKFSDFIHTQKRDPKTNCKNAAMMWDFWSLNPESLHQVLIVMTNRGTPYSYRHMHGFSSHTLSFINSKNERFWVKFHFITQQGIKNFTDDEAAEMRGKDPDFAQRDLVEAIEKGDFPRWALKVQVMPEKDADTYEINPFDLTKVWPHADYPLQDLGIMELNQVPSNYFAFVEQAAFAPAHIVDGIGFSPDKMLQGRILSYPDAQRYRLGVNYEQLPVNRCPYAVNNYQRDGSMALGDNGGDAPNYFPNSFDSPAPDPSYAEPPRKLSESMIDRYDRNAPGENDHYTQPGNLFRLLSEEEKRHTIHNIVASMKGITGPRREEIINRQLCHFFRADLTLGTGVARGLEISIDLGRFATV
>NZ_CP042432.1|WP_147698340.1|3270479_3271346_-|IS3-family-transposase
MSQDKQQRQRHIDKAGMLSIVRQCELLEVPRSSFYYKPLGESELNLELMRLIDEEYLLHPWLGVPRMTTWLRKDKGYKINPKRIERLYRLMGLSATGPKPNTSKKGKGALHRVYKYLLKGLKIVRPNQAWAMDITYIPVQGGYLYLCAIIDLYSRYVVGWSLSNAMSADWCKQTLQGAIARHGCPEILNTDQGSQFTAYEFCDWVTHPERGIKLSMDGKGRAIDNIFIERLWRSVKYKHVYLFPASDGLECYRGLQVYFEYYNTQRRHQSLDDQVPLTVYGQALKQVA

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Crispr_ID: NZ_CP042432_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_20

3529251-3529367

Orphan

Consensus_repeat	Method
CTGTTGCGAAGCACCCTCGAGAAGCACTAAAAACTTTAAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_20

>merge|NZ_CP042432|20|3529251-3529367|CRISPRCasFinder
CTGTTGCGAAGCACCCTCGAGAAGCACTAAAAACTTTAAACTAAAAACTTTAAACTTTAAACTTTAAACTTTAAGCTGTTGCAAAGCACCCTCGAGAAGCACTAAAAACTTTAAACT

>NZ_CP042432|20|18|3529251-3529367|CRISPRCasFinder
CTGTTGCGAAGCACCCTCGAGAAGCACTAAAAACTTTAAACT	AAAAACTTTAAACTTTAAACTTTAAACTTTAAG
CTGTTGCAAAGCACCCTCGAGAAGCACTAAAAACTTTAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_147698410.1\|3540218_3540914_+\|DUF4905-domain-containing-protein	unknown	unknown	gnl\|CDD\|379805
NZ_CP042432.1\|WP_158640644.1\|3537555_3537780_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239583
NZ_CP042432.1\|WP_132128566.1\|3526282_3527668_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP042432.1\|WP_132128563.1\|3520929_3521832_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP042432.1\|WP_147698354.1\|3537776_3538658_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|239583
NZ_CP042432.1\|WP_132128570.1\|3531390_3532860_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236327
NZ_CP042432.1\|WP_132128572.1\|3533973_3535467_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224978
NZ_CP042432.1\|WP_132128691.1\|3523269_3524922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132128562.1\|3519853_3520741_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP042432.1\|WP_132128567.1\|3527680_3528205_-\|DUF1905-domain-containing-protein	unknown	unknown	gnl\|CDD\|379149
NZ_CP042432.1\|WP_132128573.1\|3535503_3537417_+\|menaquinone-biosynthesis-decarboxylase	unknown	unknown	gnl\|CDD\|163413
NZ_CP042432.1\|WP_132128575.1\|3538691_3540074_-\|nodulation-protein-NfeD	unknown	unknown	gnl\|CDD\|132932
NZ_CP042432.1\|WP_132128560.1\|3517159_3518722_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|379837
NZ_CP042432.1\|WP_132128571.1\|3532971_3533871_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237864
NZ_CP042432.1\|WP_132128561.1\|3518736_3519687_-\|L-histidine-N(alpha)-methyltransferase	unknown	unknown	gnl\|CDD\|378355
NZ_CP042432.1\|WP_132128569.1\|3530671_3531388_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132128564.1\|3521926_3523117_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379049
NZ_CP042432.1\|WP_132128692.1\|3528213_3529128_-\|TIGR02757-family-protein	unknown	unknown	gnl\|CDD\|378237
NZ_CP042432.1\|WP_132128568.1\|3529435_3530575_-\|cystathionine-gamma-synthase	unknown	unknown	gnl\|CDD\|366438
NZ_CP042432.1\|WP_132128565.1\|3525218_3526253_+\|phosphotriesterase	unknown	unknown	gnl\|CDD\|238295

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_147698410.1\|3540218_3540914_+\|DUF4905-domain-containing-protein	gnl\|CDD\|379805	pfam16248, DUF4905, Domain of unknown function (DUF4905). A small family of uncharacterized proteins around 270 residues in length and found in various Cytophagales, Sphingobacteriaceae and Ignavibacteriaceae species. The function of this family is unknown.	6.59628e-11
NZ_CP042432.1\|WP_158640644.1\|3537555_3537780_-\|hypothetical-protein	gnl\|CDD\|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	4.40612e-11
NZ_CP042432.1\|WP_132128566.1\|3526282_3527668_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP042432.1\|WP_132128563.1\|3520929_3521832_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.49799e-24
NZ_CP042432.1\|WP_147698354.1\|3537776_3538658_-\|fatty-acid-desaturase	gnl\|CDD\|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	1.78074e-16
NZ_CP042432.1\|WP_132128570.1\|3531390_3532860_-\|proline--tRNA-ligase	gnl\|CDD\|236327	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional.	0
NZ_CP042432.1\|WP_132128572.1\|3533973_3535467_+\|hypothetical-protein	gnl\|CDD\|224978	COG2067, FadL, Long-chain fatty acid transport protein [Lipid metabolism].	1.4978e-11
NZ_CP042432.1\|WP_132128692.1\|3528213_3529128_-\|TIGR02757-family-protein	gnl\|CDD\|378237	pfam09674, DUF2400, Protein of unknown function (DUF2400). Members of this uncharacterized protein family are found sporadically, so far only among spirochetes, epsilon and delta proteobacteria, and Bacteroides. The function is unknown and its gene neighborhoods show little conservation.	9.78184e-115
NZ_CP042432.1\|WP_132128562.1\|3519853_3520741_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.00993e-62
NZ_CP042432.1\|WP_132128567.1\|3527680_3528205_-\|DUF1905-domain-containing-protein	gnl\|CDD\|379149	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated. This is a family of archaeal and bacterial proteins predicted to be periplasmic. YdeI is important for resistance to polymyxin B in broth and for bacterial survival in mice upon oral, but not intraperitoneal inoculation, suggesting a role for YdeI in the gastrointestinal tract of mice. Production of the ydeI gene is regulated by the Rcs (regulator of capsule synthesis) phospho-relay system pathway independently of RcsA, and additionally transcription of the protein is regulated by the stationary-phase sigma factor, RpoS (sigma-S). YdeI confers protection against cationic AMPs (Antimicrobial peptides) or bacteriocins in conjunction with the general porin Omp, thus justifying its name of OmdA, for OmpD-Associated protein.	3.40938e-17
NZ_CP042432.1\|WP_132128575.1\|3538691_3540074_-\|nodulation-protein-NfeD	gnl\|CDD\|132932	cd07021, Clp_protease_NfeD_like, Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cleaving hydrophobic substrates. Difference in oligomeric form and catalytic residues between 1510-N (forming a dimer) and ClpP (forming a tetradecamer) shows a possible functional difference: 1510-N is likely to have a regulatory function while ClpP is involved in protein quality control.	8.61012e-74
NZ_CP042432.1\|WP_132128560.1\|3517159_3518722_+\|metallophosphoesterase	gnl\|CDD\|379837	pfam16370, MetallophosC, C terminal of Calcineurin-like phosphoesterase. This is the C-terminal of Calcineurin-like phosphoesterases. It is around 150 residues in length from various Bacteroides species. The function of this family is unknown.	1.44224e-48
NZ_CP042432.1\|WP_132128571.1\|3532971_3533871_+\|hypothetical-protein	gnl\|CDD\|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	2.0813e-06
NZ_CP042432.1\|WP_132128561.1\|3518736_3519687_-\|L-histidine-N(alpha)-methyltransferase	gnl\|CDD\|378355	pfam10017, Methyltransf_33, Histidine-specific methyltransferase, SAM-dependent. The mycobacterial members of this family are expressed from part of the ergothioneine biosynthetic gene cluster. EGTD is the histidine methyltransferase that transfers three methyl groups to the alpha-amino moiety of histidine, in the first stage of the production of this histidine betaine derivative that carries a thiol group attached to the C2 atom of an imidazole ring.	7.91524e-130
NZ_CP042432.1\|WP_132128573.1\|3535503_3537417_+\|menaquinone-biosynthesis-decarboxylase	gnl\|CDD\|163413	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family. Members of this protein family are putative decarboxylases involved in a late stage of the alternative pathway for menaquinone, via futalosine, as in Streptomyces coelicolor and Helicobacter pylori. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP042432.1\|WP_132128564.1\|3521926_3523117_-\|AAA-family-ATPase	gnl\|CDD\|379049	pfam13173, AAA_14, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	1.74653e-36
NZ_CP042432.1\|WP_132128568.1\|3529435_3530575_-\|cystathionine-gamma-synthase	gnl\|CDD\|366438	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.	0
NZ_CP042432.1\|WP_132128565.1\|3525218_3526253_+\|phosphotriesterase	gnl\|CDD\|238295	cd00530, PTE, Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.	4.29431e-55

>NZ_CP042432.1|WP_132128692.1|3528213_3529128_-|TIGR02757-family-protein
MKGFLDAKVEQYNQPGFIENDPVCIPHLFTRKQDIEIMGFWAAVLAWGQRKTIIAKCRELIGLMDGTPYEFITQHEESDLKRLLGFKHRTFNATDTLYFIEFFRRHYAEFDSLEEAFTGSFSSFGATGSGKTNLGKAALGETNSNETESGETGSFKTASGEPNPGERDSNETGSGGSEPMEACLNAFRRRFFSLEDFPRRTMKHIPAPERDSACKRLNMFLRWMVRKDDKGVDFGLWTKILPASLICPCDVHVERVARKLELIRRPRGGWQTALELTRNLRKLDPSDPVKYDFALFGMGVAGEI
>NZ_CP042432.1|WP_132128567.1|3527680_3528205_-|DUF1905-domain-containing-protein
MVQFSAEIARFEKNGEKTGWFYILIPEATAQEIKAGNRQFFRIRGTINGHEFAGLGLIPTGGGGFILAVNAGIRKTLEARLGDMLHLSVEEDTDFEIIIPADLEICLAEDPRLLENFMKFNKANRNYFINWINGAKTEPTRTRRIAMTVEAMELGLDFGAMIRRDKARRQSGEI
>NZ_CP042432.1|WP_132128566.1|3526282_3527668_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MQQDFQNDTIVALATPAGTGAIAVIRLSGPDSIRIVNKVFHGKNLEEQPSHTLHLGTINDGETLIDEVLVSLFIAPRSYTKEHSAEVSCHASPYIIDRLIRLFIREGARAAKPGEFTQRAFLNGQLDLSQAEAVADLIASTSGASHRVALQQLRGGISGKLQQLREQLIQFASLIELELDFSEEDVEFANREQLSSLVHQIRLELGRMISSFELGNAIKSGLPVVISGKPNAGKSTLLNALLNEERAIVSDIPGTTRDIIEDELVIGGIRFRFIDTAGIRETTDKIEAIGVERAYGKIKQSAIVLYLFDPREVSPVELGGILDEIRTHMAKPENLLAVANKIDLLESEKVRSDYSFAENLLLISAREQQNITILTDALLEKAQAARLDSDETIISNIRHIEALTRTDEALANALEMMEQLVSGELLAFEIRQALHYLGEITGSISNEDLLDSIFSKFCIGK
>NZ_CP042432.1|WP_132128565.1|3525218_3526253_+|phosphotriesterase
MKRRVFIQKGLLATAPLAGLDRFQLLRPPDHVVTVNGPVPTRKLGFILSHEHILVDFIGADQVNPMRYGQDEVFDTMLPFLEDARRRGVRTFVDCTPEWLARDAQLLKRLADASGLHIITNTGYYGAAGEKYLPPHAYTETAEQLAERWISEWRNGIDNTGIKPGFIKTGVDRYPLSAVQRKLMRAAALTHLETGLTIFVHTGDGRAALEELTIITDTGAAPEAWVWTHAQSEPDRALHLQAAKAGGWVAFDGLYPQLADRYVAFLQDMKARRLLHRVLISHDAGWYEVGKPRGGMIRPYVSVFEDLIPALKKAGFTTAERRQLFETNPAEALTIRIRKTPPQF
>NZ_CP042432.1|WP_132128691.1|3523269_3524922_-|hypothetical-protein
MKHWLLLFFLLTSISGIAPGQANNPQENVVITSNNEKTRVRTTETGGLQINVSKKDLLKFKENGYVRYSDFGAKGDGKTDDIDAIAAAHAFANQEGLPVKADEGASYYIGGKARTAVIQTETDFGTAEFIIDDTEVKDRNLHVFLVSSTLLPFTPGGISSLKKNQEKINVPLPGPSLITVTNSFVKRYIRFGPNQNNGASQTDIFIVDKVGNVDMNAPIIWDFDKITDITAIPIDQTRLTIKGGKFTTIANRAESKYTYYSRGIAIRRSNVLVEGLVHRITGEGEHGAPYGGFLNFRDCANVTVRNCILTGHKTYRTIGSAGVPVSMGSYDISLSRALNISFEHCSQTNDINDPTYWGIMGSNFCKNLVLDHCTFSRFDAHMGVANATIRNSTLGHMGINAIGSGTFLIENSTLNGRSLINLRPDYGSTWQGKFIIRNCVFIPAGGRTATPILIGGSNSGQHNFGYTTYMPELIIIENLHIDDSNHPEDYHGPAIFANFNPKMTDDSYVEKYPHIRTEEVILKNITIESGKKLRVSDNMYLFKDVKISAE
>NZ_CP042432.1|WP_132128564.1|3521926_3523117_-|AAA-family-ATPase
MEKLFEKFQQKIAHISTQFVRSSISAINWKARLIGIKGPRGVGKTTLMLQYIKLYLGENINSTLYVSLDDIWFSNNKLVDLAEDFVKRGGTHLFLDEVHKYPDWSQELKNIYDDHPMLQVVFTGSSLLEILNARADLSRRAVIYYMQGLSFREYLAIEQGVYFDPLQLETIIHDHSSLSAMVLKKIKPLQYFSQYLKNGYYPYYQEEADLYARRVEEVINMMLEIELPLLRQMDIGYIRKIKQLLLIIAESAPFIPNVSKISEKIGINRATLLSYLHYLQEIGLTRNLFRSASGISRLQKPDKIYLENTNLAYILGNANIGNVRETFFANQLDHQHQLLFPEKGDFLVDNEYVFEIGGKDKSAEQLRGIVNGFIAADDIEHGFLQKIPLWLFGFLY
>NZ_CP042432.1|WP_132128563.1|3520929_3521832_+|alpha/beta-hydrolase
MNTRIKTGFLAAIILTVIACRPQQDTVVSQETKPAESGYADINGLKMYYEVYGKGQPIVLLHGSFMNIPLNWSRIIPLLAKDRKVIVAEMQGHGRTKDISREISYEGMADDVSGLLKHLKIDSADILGYSMGGGVAFQIAVRHPEQVRRLVILSGAYAHDGWWPDVEASFATFTPEMFENTPIKKQYDSLGNDPEHFPEFVKKVISIDLKPYDWSREVKNIKAPIFMAIGDADGVRYEHALELFRAKGGGKMGDIYGLPESRLAILPGTTHIGMMQQTDWLIPMITDFLDSDLNAPPPTF
>NZ_CP042432.1|WP_132128562.1|3519853_3520741_-|dienelactone-hydrolase-family-protein
MKEIRKEDIKQEVFDLYDDYAHNRVGRREFMQRLSTYAVGGLTVASLASFLMPDYKNAIQIRQDDPRLKSEYVNYPSVKGGGTIKALLSMPADAEQRLGGVIVVHENRGLNPHIEDVGRRAALAGFISIAPDALTPLGGYPGNDDDGRELQRKRDRNEMLEDFIAAFEYLKDHKNCNGKAGVVGFCFGGWISNMMAVRIPDLAASVPFYGGQPESEDVPKIQAPLLLHYAELDTRVNEGWPAYEAALKANNKEYTAHMYAGANHGFHNDTTPRYDKAAAELAWKRTIDFFNEKLT
>NZ_CP042432.1|WP_132128561.1|3518736_3519687_-|L-histidine-N(alpha)-methyltransferase
MKGFLNEILRGLRACPKYLPAKYFYDETGDRLFQQIMSSPEYYLTRCEYEIFSLKTPAIADLLQSHLPLFDLVELGAGDCLKSRFLLKELVHRNLSFTFYPVDISANVIEQLTQTLPEAIPGLKLHGLNGEYLAMLEKARQLSDRPKVVLFLGANIGNLEKDQTGIFLAQIRATLKKGDLLCIGFDLKKDPDIILSAYNDKAGLTRAFNLNLLKRINREFEADFDLTAFKHFPVYDPVSGACRSFLISLKQQRVNMKTAGESFCFEPYEPVFMEISQKYSRDEILALALTSGFRPLTTFCDSKHWFGDAIWEVDDK
>NZ_CP042432.1|WP_132128560.1|3517159_3518722_+|metallophosphoesterase
MKKQVIIGSLGLMFISFTAFAQEIAKGYVYEDVNQNGVKERREKGIPGVSVTNGIQVVQTDDKGRYELPAGNDQIISVIKPGTYNVTVNDQQLPQFYYIHKPQGSPELEYAGVESTGDLPKEVNFGLKKNEVTENFKMILFGDPQVYTLDEVSYYRNAVINELRGVEGFEFGMSLGDLVGNKPTLFNPYIEATSEVGIPWFNVMGNHDINFDVEADSLSDESYEAHFGPANYAFNHGKVHFIVLDDIIYPDPRDKKGYWGGLNDQQLEFIKNDLQFVPKDHLIVLAFHIPISHENSFRTEDRDRLFELLKDFPYTLSLSAHTHRQTHFFMDRRQGWLQDKPHHHFNSGTTSGNWYSGRLNEKGIPYSMMADGTPKGYSFITFDGNQYIIDYKAVDKPAEHQIGIYAPKVTGYKVKGSSPVYANFYMGSADDEVMMRVDNGEWKEMKRVEEFDPTFIAKQVAWDMTEELWEGRRPGAAAISDHLWKASLPDDLPRGTHTIEIKATDMFGRTFIEKRSYRIE
>NZ_CP042432.1|WP_132128568.1|3529435_3530575_-|cystathionine-gamma-synthase
MKFGTKAIHAGVFPDPSTGAIMTPIYQTSTYVQAAPGEHKGYEYSRTQNPTRHQLQNNIAALENARHGFCFSSGMGAIDTLVKLLSPGDEVIATNDLYGGTYRIFTKVFEKYGIRFHFAGMEDASAVQSFVNERTRMIWVETPTNPTLKINDIAAISAIAKQCGALLAVDNTFASPYLQTPMDLGADVVMHSLTKYMAGHSDVVMGALVCNDDKLAEDIAFLQNSCGAVPGPQDCFLVLRGIKTLHLRMQRHSENGAAVARFLNEHPAVSKVYWPGLPDHPNHDVARRQMRDFGGMLSFSLKGDRIEDAMRVLSATKVFSLAESLGGVESLLGHPASMTHAAIPREERLKSGVTDGLIRLSVGVEDVEDLIGDLEQALI
>NZ_CP042432.1|WP_132128569.1|3530671_3531388_-|hypothetical-protein
MTEKKEALVKKIRDENYEAILKNLKGRAALKQAVYKEVCQVYKELLSSLEMISGKLKDDIAEVKDVEIELREINQFESMLKFGSDVLIVSMHSNVFYVNPAHFIHKTGYVKEDNSKAYCGVIHIHNFLADSIKYNRTNDTGYLVARIFINKERHFFVEGRGQFSFLYEDFSESVLDKLVIDNIVELAINHSIEFDLVAPDFEHIKAISLMDKQLQYANSGYQTDKQLGYKFSAQAGVK
>NZ_CP042432.1|WP_132128570.1|3531390_3532860_-|proline--tRNA-ligase
MANVLTSKEEDYSQWYNDLVDEAGLAEHSAVRGCMVIKPYGYSIWEKMQGALDKMFKDTGHSNAYFPLFIPKSFLAKEASHVEGFAKECAVVTHYRLKDSDEGIIVDPDARLEEELIVRPTSETIIWNTYRGWIQSYRDLPVLVNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATRDEAVKEAEQMLEVYADFAENWMAMPVLKGIKTPNERFAGALETYCIEALMQDGKALQAGTSHFLGQNFAKAFDVKFTDREGKLDHVWATSWGVSTRLMGALIMAHGDDNGLVVPPRLAPLQVVIVPIYKKAEEIGAISEAVEKIMEALKSKGISVKYDDSDKQRPGFKFAEYELKGIPVRIAIGPRDLEKGTVEIARRDTREKMTVSMEETPAKVAALLEEIQQNIYKKAKDFRDANTRPADSYDEFKQLLEEKGGFIMAHWDGTAETEQRIKEETKATIRCIPLNNPKEKGKCILTGKPSEQRVIFAKAY
>NZ_CP042432.1|WP_132128571.1|3532971_3533871_+|hypothetical-protein
MKKLVYITAIGSLLLGSCAAPKLAKESVDDDFYGKEYTPEESYASNVSEEAYEEDEYAYRRSYDDSYDENYEEDSYYNSYTHRLRRFHSPFYGFSYFDYYDPFYYDPWLRPGFGLGLSLGFGGYYGGYRPWGYYSYSPYFYSPYYYSTPYMGYNYASYGGYWGGYHPGYYYSRPIYRPSNGTYNRPRPRVGSVNDGNYSRPRPGSGTISERPSSRPRQTTQPARRPSSSADRPAARPGSTERPRTERAAPPRETSRPQARPRPQSRPTYSPPPRSSSPRSSGSSGRSGGSSGSSRPRPR
>NZ_CP042432.1|WP_132128572.1|3533973_3535467_+|hypothetical-protein
MNFKHIKTLAALSFACLSLPAFAQNYEDDALGYSQSELIGTARIQAIGGAQVALGGDLGTFGINPAGIAFYRSSDLGITFNFKNVSNKATYLDSNTDDPFSKFTVPQFGLVIANARKENDGSFNGRWNNFAFGLSYMRTNDFNNRYSYQGYNGSSSITSFFADLAYNRYQGDELPDINDPFYLEDVAYAAGIIDDAEIDGQPTFIGLSEFGDLQQFREVETKGGISETSVTLGGNYGNQLFLGAALTYVNVRQENESYYTEYDINDPSYPFDITSFDYVRNYEQRGAGFNAKLGAVYLPVKDVRIGLSVQTPTFIKFEEDNYDEIVTLESNGESYNSSIEGTFDYDIRTPLKVNAGLAKFFGDQGFLSADVEFVDYSRIDFDSEFRDFNNDINQRVSDRFKNAVNFRVGGEYKLDAISLRLGYAYFGSPYSNTEEDFSRNYFTGGLGYRYSNVYVDLAGIYNQSTTTQVPYEAGDLSPVADIDHNKLGIMLTVGTRF
>NZ_CP042432.1|WP_132128573.1|3535503_3537417_+|menaquinone-biosynthesis-decarboxylase
MAYKNLQHFIDTLEKKGELVRIKEYVDPRLEITEITDRVSKKYGPALLFENTGTDFPLLINSMGNYKRMCLALGVKNMDDVTREIETLFKELTGPKDNILDKLKMLPRLGKIASWMPKVISGKGACQEVVMKDPDITRFPVLTCWPEDGGPFVTLPVIHTKDPRTGIRNVGMYRMQVFGPKLTAMHWHKHKVSARHFNEYKKLGQRMPVAVALGGDPVYTYCSTAPLPDNIDEYMLAGFLRKQRVELVQCLTQDVQVPADADIIIEGYIDPEEDHILEGPFGDHTGYYSLADYYPKFHITAITHKKNAVYPATIVGIPPQEDAWIGKATERIFLAPIKMTMVPEILDMVLPMEGVFHNLVIVKIKKEYPGQALKVMNSLWGAGQMMFTKMMVVVDGDVNIHDNLAVARHISAHVDPETDIIFTQGPMDILDHACTKPSFGGKMGIDATRKLDEELRISGYKPIPQIFASADKDELTTLFPEITGINDSLLKYGISLVFVSVKKERKGQVAELNEKLFKHEFFREIKVVIYLEHTVDIAHIADAVWRFSNNVDPRRDSFIIKAADERSVSHIGLDGTRKTKELDGFSRDWPNILASRPETIEHIDKLWDKLGLGEFISSPSRIYLKQLYRGGAVVEED
>NZ_CP042432.1|WP_158640644.1|3537555_3537780_-|hypothetical-protein
MTFLLGGFNLHVVHHLFPNVSHVHYPALTEILKETAAEFNIEYRSFSLGEALMSHWKLLRRNSFKENMALLEEA
>NZ_CP042432.1|WP_147698354.1|3537776_3538658_-|fatty-acid-desaturase
MKTLSVKFKKEAPGDFYHVLRQRVNQYFEDKGLKKKATLYFKVKALSFIVAYFLLYFNLLFNVESKQGVFLSYMGMGLFMFLIFLNVVHDAAHEAIFKSRKLNLIFTWFLELFGTNNRLWRTRHLDSHHIYPNIFGWDVDIKQSPLVRIADNSPFLSFHRFQHLYMPVVYFVYTLNWLIYRDFKDITEKRLGPKVNVRYPWYQVAGMILAKITYVLYILVVPVLLLPVSFWTIFLAFLLMHFTTSFVTIFALVSSHVGENAVFPQPDEEGRLPHTWAEHQLITTADYAADNPW
>NZ_CP042432.1|WP_132128575.1|3538691_3540074_-|nodulation-protein-NfeD
MYRTLLFLLLLAGSSCFSGHARIQSIASPQSPPDSAAQRVPVVYQLDIRENIGPAALRKMQRAFEEAPKVNASYLLVHMNTYGGLLDAADSMRTRLLQSEIPVIVYINNNAASAGALIALACDSIYMHPGATIGAASVVNQSGEIMPEKYQSYMRSMMRATAEVQGRDPRIAEAFVDPAVEIPGIIQAGKVLTFTSEEALKHDYCDGIVSGIEEALHMAGLEEYELVVPEITWMDRLIDFLINPMVSGILLMLIIGGIYFEMQSPGIGFALAVSVGAALLYFMPLYLEGLAANWEILLFLIGLALLVLELFIIPGFGVAGILGILFIVCGLAFSLVLNDYFNFSIGGGNLVNALLLVMASIVITTVLAFVFGKNIFSSRMFKKLSLMDEQRSSDGYVGTEKSHNLAGLSGLAVTDLRPSGKIEINGQRYDAVSEGAFLVKGTEIEVIKHETFSIFVRQKR
>NZ_CP042432.1|WP_147698410.1|3540218_3540914_+|DUF4905-domain-containing-protein
MDFFQLYPYHGGTWTFDELQLQEPWFCGLEGLAHGHAYLHGYLSETLPEHRGIFAVRLENGQIAWEDYNLVFSHATGEGLIAWNYKSEPRRYQLVDPQTGTTVRSFASREESEQLSSPISAAAVYLPSKVTLDEEWLRHLPPDALPAADLLQFNQRWLLAFYTADEGEETASLTENKKMDHHLYVINNERQVIHKDLLGEGILQPAMDTFFVMGNQLYYIKSKSEILAYFL

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Crispr_ID: NZ_CP042432_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_21

3786268-3786383

Orphan

Consensus_repeat	Method
CAGGCAGCAACCCGCCCGAACATGAATGGAAGCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_21

>merge|NZ_CP042432|21|3786268-3786383|CRISPRCasFinder
CAGGCAGCAACCCGCCCGAACATGAATGGAAGCCGAAAATGCCGCCGAAGTTCGAACCCGACAGCAGCACACCAGCGCCCCCAGGCAGCAACTCGCCCGAACATGAATGGAAGCCG

>NZ_CP042432|21|19|3786268-3786383|CRISPRCasFinder
CAGGCAGCAACCCGCCCGAACATGAATGGAAGCCG	AAAATGCCGCCGAAGTTCGAACCCGACAGCAGCACACCAGCGCCCC
CAGGCAGCAACTCGCCCGAACATGAATGGAAGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129883.1\|3776722_3777145_+\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|237569
NZ_CP042432.1\|WP_158640655.1\|3792586_3793309_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274384
NZ_CP042432.1\|WP_132129878.1\|3782210_3783281_+\|PA0069-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|275263
NZ_CP042432.1\|WP_132129876.1\|3783911_3785084_+\|NADH-quinone-oxidoreductase-subunit-D	unknown	unknown	gnl\|CDD\|180385
NZ_CP042432.1\|WP_132129882.1\|3777286_3778645_+\|DUF3078-domain-containing-protein	unknown	unknown	gnl\|CDD\|378621
NZ_CP042432.1\|WP_132129884.1\|3774977_3776492_+\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|273086
NZ_CP042432.1\|WP_132129879.1\|3780840_3782169_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379138
NZ_CP042432.1\|WP_132129880.1\|3779561_3780776_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP042432.1\|WP_132129877.1\|3783402_3783900_+\|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl\|CDD\|376317
NZ_CP042432.1\|WP_132129871.1\|3789306_3790590_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	unknown	unknown	gnl\|CDD\|234789
NZ_CP042432.1\|WP_132129875.1\|3785370_3785901_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP042432.1\|WP_132129868.1\|3794338_3795286_+\|MCE-family-protein	unknown	unknown	gnl\|CDD\|224380
NZ_CP042432.1\|WP_132129873.1\|3786841_3787618_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132129867.1\|3795337_3796630_+\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP042432.1\|WP_132129866.1\|3796817_3797489_+\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
NZ_CP042432.1\|WP_132129872.1\|3787628_3789149_-\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_CP042432.1\|WP_132129869.1\|3793447_3794263_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP042432.1\|WP_132129881.1\|3778662_3779484_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|223867
NZ_CP042432.1\|WP_132129865.1\|3797728_3798019_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NZ_CP042432.1\|WP_147698371.1\|3790589_3792689_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|224369

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129883.1\|3776722_3777145_+\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|237569	PRK13952, mscL, large conductance mechanosensitive channel protein MscL.	2.61674e-66
NZ_CP042432.1\|WP_158640655.1\|3792586_3793309_-\|hypothetical-protein	gnl\|CDD\|274384	TIGR03002, outer_YhbN_LptA, lipopolysaccharide transport periplasmic protein LptA. Members of this protein family include LptA (previously called YhbN). It was shown to be an essential protein in E. coli, implicated in cell envelope integrity, and to play a role in the delivery of LPS to the outer leaflet of the outer membrane. It works with LptB (formerly yhbG), a homolog of ABC transporter ATP-binding proteins, encoded by an adjacent gene. Numerous homologs in other Proteobacteria are found in a conserved location near lipopolysaccharide inner core biosynthesis genes. This family is related to organic solvent tolerance protein (OstA), though distantly. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	0.00236333
NZ_CP042432.1\|WP_132129878.1\|3782210_3783281_+\|PA0069-family-radical-SAM-protein	gnl\|CDD\|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	4.22943e-22
NZ_CP042432.1\|WP_132129876.1\|3783911_3785084_+\|NADH-quinone-oxidoreductase-subunit-D	gnl\|CDD\|180385	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D.	1.58928e-171
NZ_CP042432.1\|WP_132129882.1\|3777286_3778645_+\|DUF3078-domain-containing-protein	gnl\|CDD\|378621	pfam11276, DUF3078, Protein of unknown function (DUF3078). This bacterial family of proteins has no known function.	2.81639e-18
NZ_CP042432.1\|WP_132129884.1\|3774977_3776492_+\|asparagine--tRNA-ligase	gnl\|CDD\|273086	TIGR00457, Asparagine--tRNA_ligase, asparaginyl-tRNA synthetase. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, asnS, represents asparaginyl-tRNA synthetases from the three domains of life. Some species lack this enzyme and charge tRNA(asn) by misacylation with Asp, followed by transamidation of Asp to Asn. [Protein synthesis, tRNA aminoacylation].	3.6363e-174
NZ_CP042432.1\|WP_132129879.1\|3780840_3782169_+\|hypothetical-protein	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.08524e-09
NZ_CP042432.1\|WP_132129880.1\|3779561_3780776_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.0801e-24
NZ_CP042432.1\|WP_132129877.1\|3783402_3783900_+\|NADH-quinone-oxidoreductase-subunit-C	gnl\|CDD\|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	1.52496e-59
NZ_CP042432.1\|WP_132129871.1\|3789306_3790590_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	1.04344e-135
NZ_CP042432.1\|WP_132129875.1\|3785370_3785901_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	5.88769e-31
NZ_CP042432.1\|WP_132129868.1\|3794338_3795286_+\|MCE-family-protein	gnl\|CDD\|224380	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	2.04445e-20
NZ_CP042432.1\|WP_132129872.1\|3787628_3789149_-\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	8.91534e-122
NZ_CP042432.1\|WP_132129867.1\|3795337_3796630_+\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	6.79362e-133
NZ_CP042432.1\|WP_132129866.1\|3796817_3797489_+\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	1.21729e-148
NZ_CP042432.1\|WP_147698371.1\|3790589_3792689_-\|LPS-assembly-protein-LptD	gnl\|CDD\|224369	COG1452, Imp, Organic solvent tolerance protein OstA [Cell envelope biogenesis, outer membrane].	3.2416e-06
NZ_CP042432.1\|WP_132129869.1\|3793447_3794263_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.48387e-69
NZ_CP042432.1\|WP_132129881.1\|3778662_3779484_+\|glutamate-racemase	gnl\|CDD\|223867	COG0796, MurI, Glutamate racemase [Cell envelope biogenesis, outer membrane].	4.69212e-79
NZ_CP042432.1\|WP_132129865.1\|3797728_3798019_-\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	4.46605e-34

>NZ_CP042432.1|WP_132129875.1|3785370_3785901_+|RNA-polymerase-sigma-factor
MKEIIPEKVLVEKCRQNNSNAQRELFNRYKNAMYTLAFRMLNNEDEAHDALQEAFISVFVNIRKFRGESSLGAWIKTIQIRAALRIIQKRMQFETLDEQWEDKGQSLNGWMDGEMLDKSIRSLPAGCRSVFVLVEIEGYPHREAAALLNISEGTSKSQLSYAKKLLREKLNETLKV
>NZ_CP042432.1|WP_132129876.1|3783911_3785084_+|NADH-quinone-oxidoreductase-subunit-D
MTTRYETLKNSLQTEEMVINMGPQHPSTHGVLRLELITNGEVVNECIPHIGYLHRCFEKHAEALSYPQIIPFTDRMDYLASMNNNHIFAMGVERMMGIEENIPKRIEYIRVLVAEMNRIASHLIAVGTYGIDIGAFTPFLWCFRDREHIMGLLEWASGARMLYNYIWVGGLFYDLPVGFEERCIEFVEYFKPKLKELDILLTDNQIFINRTAGIGVLPLDVAISYGCSGPMLRGSGLKWDLRRVDNYSVYPEIEFEIPYGSGEMGTTGDCWDRFKVRIDEIKESVLIMEQCLARLTKELKRSPDFDPRALVPKKCFPKHKEYYMRGESPKGELGFYFIAQERSEIPFRCKARGPSFNNLSVISEITRGAMIADVVAILGSIDIVLGEVDR
>NZ_CP042432.1|WP_132129877.1|3783402_3783900_+|NADH-quinone-oxidoreductase-subunit-C
MFEKIKSIIGEKFGEEVIQAEEPEALQPALTVEAARIADICLELRDNPGAYFDFLSCLSGVDYGPESGEFGVVYHLASIPYKTSFVLKVRVKGGRNTEELPAVPSVSSVWRTADWHEREAFDLVGISFTGHPDLRRILLPDDWEGYPLRKDYKTAETYKGIKIDY
>NZ_CP042432.1|WP_132129878.1|3782210_3783281_+|PA0069-family-radical-SAM-protein
MNAGGEDNTYFKGRGAQLNTKNPYLNTEYVAEHPEGIDEAMLENSATQYIEESPKKVVNKVDSPDLNLMYSLNPYQGCEHGCIYCYARNSHQYWGYSAGLDFERKIIVKKNAPALLEACFEKKTWAGIPIVLSGNTDCYQPVERKLKITRRLLEVFLKYRNPVSIITKNALILRDLDLLRELNSLDLVHVSVSLTSLNEDLRQALEPRTVTAKGRLKVIQNLSAEGIPVRVMTAPIIPGLNSEEIPALIKAAAEAGASAAGYTLVRLNGAISQLFEDWVHKSFPDRAQKVLHLISECHQGKLNDSRFGTRMRGDGNIADMISKLFHTSVNRYLKGREMRPLNSHAFKRPSDQLSLF
>NZ_CP042432.1|WP_132129879.1|3780840_3782169_+|hypothetical-protein
MKKFACTLLLYLVSLAGTLGQDNKPGNRHDLIEKLMQSRPEWFGHLLDSAGYYEIQVIYTQIDRDRKNKPHFTSYTYRLDKERYFYPASSVKLPLAVLALEKLNDLRIDSLTKDTPLRIGSGFRTQLPLLSDHTARNGLPTIAHFIRQVLLVSDNWAYNRLYEFVGQREIRERLAQKGLNNVRILHRFIVGDSRETSRHSNPFTFYQPLPAGEVPDGTHPEIARGEKVIYRQPAAYNEMDFFSGLPEVTAGAGYVDNEGRLVMDPFRFTDKNFFPLEMQQELLKRILFPESYPPSRRFRLHPDDYLFLRKYLSMLPRESGPFPDYSDTCAYWDSYAKFLMYGNRKTARIPAHIRIFNKMGNAYGYVTDNAYIVDFKNRVEFLLTATIATNTDGIYNDDRYDYIGTGYPFMEHLGRLIYEFELTRSRERLPNLEEFRIDYGMR
>NZ_CP042432.1|WP_132129880.1|3779561_3780776_-|C40-family-peptidase
MRVTDKVIIAAFMLLTACDAGEAGKVDKMAASVKERYAPDKRTVLFNVSAEKQGGRLVLKGETTSPLAKDKLFHLLDSAGIEVTDSLQVLPGNDVGKNVFGVARLSVCNLRVEPGHSAEMATQVLLGTPLKIIKDEGSWLLVQTPENYIAWTQESGLTRMDSAGFAVWQSQPKLIYTADFGQALLDPSSGQVVSDLVIGDILVAGGETGSFYNAVFPDGRTAFIKKEEAQLLDNWIGSLNPSGESVLEIARQMMGAPYLWGGTSAKGMDCSGFTKTAYFMNGIILPRDASQQVFSGLSVDIYAGDTVSIASCLLHLRKGDLIFFTNDPARQNEENARITHVGIYIENGEFIHSSGFVHRSSLLDTAENYSERHAKTLTKARRILGSGEENGISLINMHPLYKGK
>NZ_CP042432.1|WP_132129881.1|3778662_3779484_+|glutamate-racemase
MKQGPIGIFDSGYGGLTVLKEIISELPEYDYLYLGDNARAPYGTRSYETVYQYTLECVKQLFDMGCQLVILACNTSSAKALRTIQQNDLPGIDPSRRVLGIIRPSAEVIGDYTSTGHIGILATPGTVASDSYLMEIRKFFPRLKVFQEACPMWVSLVENNEHYNPGANYFVQKHMDNLLKKSSYIDVILMACTHYPLLINKIKQFLPGGVRVLDQGRIVAKSLADYLKRHPEMETLCSKNRRYQFYTTNSTETFERQGSAFFGQPVHARHLDI
>NZ_CP042432.1|WP_132129882.1|3777286_3778645_+|DUF3078-domain-containing-protein
MKKLLILLLFFSYSVQGQIADSLQADTTGGPDSLRTDSLIIDGAAADTLPGDSPVIDSSLADSLVTDSLPAGNLPGDTIPAGLDSAGLATDTVPERIEGVTNQIRNMEKIILVPPGTPVEPGFMRADTAYGKVEDLMPLPFEGETELTYEEEWPVTLPDLTMERKEPVWLYPQYFWRKGIITGFNFSQASFTNWAAGGENNLNLITFASIYFRKSTLRYEWENLIDAAYGVQSFQGLDVIRKSEDKLEFTSKIGHKTTETLFTSFLFNFKTQFDIGYNYHGDNERDKVSNFLAPAYVTTSLGLDYKPSKAFSLLLSPIAGKITLVMDQELADQGRFGVDKAVLDTAGNVIEPGKNSRSQLGMGLNARLSKGLGKNITFNSKLDMFGDYEKPTSIDISWDNSIIFRVNNAISANLSTALIYDEDILIKKDGEDVGKPRIQFKEIFSLGVRFDI
>NZ_CP042432.1|WP_132129883.1|3776722_3777145_+|large-conductance-mechanosensitive-channel-protein-MscL
MGFVKEFKEFALKGNVVDLAVAVVIGGAFGKIVTSLVNDIIMPPIGLLMGDTDFTSLFIPLDGNDYESLDAATEAAAPVLAYGSFIQTVIEFVIIAMAIFLVIKGINRFKKKKEAAPAAPPAPTPSEKLLEEIRDLLKTK
>NZ_CP042432.1|WP_132129884.1|3774977_3776492_+|asparagine--tRNA-ligase
MAFIEQLAAVEGQTVTLRGWVANKRSSKGLVFIILRDGTGLCQCVADASKLNEEAFSLADKLTQESSVEITGKICRDERQVGGYELRVSDLKVYQLAQDYPITKKAHGVEFLMDNRHLWLRSNRQWAIMRIRNRIIQAIHRFFQERGFIEMDSPIFTGNAAEGTTTLFETDFYDEKAYLAQTGQLYGEAMAMAMGRIYTFGPTFRAEKSKTRRHLSEFWMIEPEIAFCDLDMNMDLIEEFLRYVVEAILEECPEELELLERNIEKLKNVRKPFPRMSYTDAVKIIRGEKDVNGRNSIKTLENDLAELRQRITDIQAEVAEREAKIKAPGMKKGEINFNQNKIAGLKNELKDLEESSKNIPQWIESAKAFEHGNDFGGSDETVLTRLFDSPVMVYNWPAGIKAFYMKRANDPDYVKGVDVLAPEGYGEIVGGSEREDNLDLLVERIKDEGLPMEAFEWYLDLRRYGSVPHSGFGLGLERLVAWICKLPHVRETIPFPRMYGRLFP
>NZ_CP042432.1|WP_132129873.1|3786841_3787618_+|hypothetical-protein
MKYRIFIFIAAIGTAAFGLAASAQEIIPQEFPKKYSPWMQERVDEHEVTDTLSYELPNDGIITILYNSAEYSEKEIDDKLRKPASEAIGFPAGKQLVYHLVERYPETDLQHLFMLLSTKYAGKMKGHMLMLGLPAGIDYIGGHFTPEIGLRVDFHIPKYNLGVSLNDVVYFEDKETGGVKAEHNPFINLDFAYSGRKLFPDNYFQIGYLLKKNSTLFEGTTLKAVYKYQLKKIVYLQAGAISTDNFKQVYPIFGITIF
>NZ_CP042432.1|WP_132129872.1|3787628_3789149_-|2-oxo-acid-dehydrogenase-subunit-E2
MARYELLMPKMGESVAEATVIRWVKEVGEMIEADEAVLEIATDKVDSEVPTPVAGKLLEQRFKENDVVQVGEVIAVLDTEESLEAGESVDVDEGGTPDETGQEGEAGQQSRAGEGTETGQETKSGQQGETVRQSEIREPGAEADGPAKGEALSGETSERPGGPYVSGDEPEHANERAIPGIELLETAPFSSGVPPRSESGRFYSPLVRSIAENEGIGTEELENIPGSGADGRLTKSDVLAYLEQKKQGGISASGQADRRSGITPPPVNVSPGDEIIEMDRMRRLIADHMVMSKQVSPHVSSFVEADVTNLVRWREKIKGAFEKQEGEKITYTPIFIEAVTKAIRDFPMINVSVKGTQIIKRKQINIGMATALPSGNLIVPVIRNADQMSLVGLTKAVNDLSSRARENNLQPDEVREGTFTVTNVGTFGNVMGTPIINQPQAAILALGAIRKKPAVLETPEGDVIAIRQMMFLSLSYDHRVIDGVLGGSFLRRIADYLEAFDPDRKI
>NZ_CP042432.1|WP_132129871.1|3789306_3790590_-|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein
MLAEIITIGDEILIGQVIDSNSAWLAGRLNEVGITVGQITSIGDDPAVLENALEEASRRADIIIMTGGLGPTKDDRTKQTLCGYFGGKLVLHEKVLENVKTIFSRSNRPLLDSNMRQAEVPDNCRVLLNSQGTAPGMWFEKEGRVYISLPGVPFEMMGLAGEQVIPMLKEYFRDRLEPVLHKTLVTTGIGESFLAELVAPAENFLPPYIHLAYLPRPGMVRLRLSAYGKELTASGNKPAEGIVSALQLEKELDIHASRIMELAEKYVIATEDTPVPEIILNRLRERGRTLATAESCTGGYIAHLITAIPGASDVFSGSVVAYSNKIKSSLLGVNDITLTHFGAVSRETVSEMAAGAIERLGVDYAIACSGIMGPGGGSADKPVGTVWIAVADKEHVQAEKFSFSGRRPQLIERTAIAALGMLFHFVE
>NZ_CP042432.1|WP_147698371.1|3790589_3792689_-|LPS-assembly-protein-LptD
MDEHRVAYIQDGIYTTCTNPAHPHFGIRLYKTKVKENQIITGPANLFIEGIPLPLGVPFGFFPKTQKRASGIIFPSIREDASLGFSAENFGYYLGLSDHFDLSVLGEMYSLGSYGVRASSRYSWRYRFNGNFSFDYLRRKFPNDATGGYSLGKQFNIRWSHSQSNRGTGTNFSANVNAGSSKYYQNTTDFNLQDKARNTLASGINYSKTWLNSPFSLSASANHSQDVSTGQVSIGLPTLSFNVSRITPFDSKNRVGAQKWYHRIGMSYSLQADNRVSTGDSILFSPQTLDRLQTGIRHSIPVSTSFNLFNYFFVSPSFNYNERWSFKSFRKYYDPGVDRVITDTVKGFQASRDYSLSLGMNTRIFGELNFRKGKIKAIRHVITPSIGFSYRPDFGAEKFGYYQYYVNAEGERTRYSIFEGTLYGGPSAGVSKSLNFSIDNIIEMKVRAENDTTDGEEDGEKKVKLLDRLSINGGYNFADELFPLSNINFSGSTTLFEKISMSFNGSFDPYAVIDGRREPVYLLKHSNKLARLTRFSFSVRGSLNSRGEGNTTGQPVNPVGGLDPSMQEQLYLVDPNPEAFVDFNLLWSLSFGYSFNYSNPGTYSSRAAGPVKRTTQALDMNGDFSLTPKWKIGFQTSYDFERGEVGSTSFSIFRDLHCWALSFNWIPFGSYRSYSMDLRVNAAVLQDLKLTKRRNYYNY
>NZ_CP042432.1|WP_158640655.1|3792586_3793309_-|hypothetical-protein
MITVCFLAGEMYAASGLRPYSALQDGPPADTLPKGAPGADSIPLLTPVSADSLPGTAVLSADSISLTQDSLGIVPIAGGLENAADTSGAPADTTKGGLEAQILSKAEKSITYYLNDKYTVLRGNAYIEYLDITLNAEYIRINNVKKEIFATGLKDSLGRYYGRPKMVQGGQEITADSLKYNFETRRAFAWNSLTAEGEGYIRGVRVKWMNTGWLISRTGFTRPVPTLLIRTSVSAFIKRK
>NZ_CP042432.1|WP_132129869.1|3793447_3794263_+|N-acetylmuramoyl-L-alanine-amidase
MKRILGACTLITLLISTAALAGTIDTTSIGKEDNFSGGYALKTVVLDAGHGGHDPGTNWAGVYEKHIALSITLKVGKLIKENMPDVKVIYTRDDDTFVELYERANIANRAHADLFISIHCNANNSTSPYGSETYTLGLHRTEDNFEVAKRENQVIYLEENYKENYHGFDPNSPESYIIFSLYQSQNMANSISLAARIQQEFKSAGRHNRGVKQAGFLVIRETSMPSVLVETGFVSNANERKFLNSYEGQMKMARSIYNAFKSYKTSVESAN
>NZ_CP042432.1|WP_132129868.1|3794338_3795286_+|MCE-family-protein
MRIAKETKIGILAAVAIATLIIGYNFLKGNDVFSSSQQFYAIYDRVDGLTASKPIFVNGFQVGRVAKLELLPGKQIRATLEVNEDIPIPANTIAEIQSTDLLGSKAIYFVLGNSDQMAADGDTLASNVEKSLAESVNPVKDKAVVMLDKIDSILTALNSIMNPQFQENINQSLVSINNTLQSLESTSKKVDNIVGSGAQRLQTILANVESITTNLRENNEQITGILANIEQVTDQVAAGKLRETLNNANQATGQLAAMMEKIQNGEGSLGALLNDEALYKNLNNSAESLDKLMIDLRENPKRYVHFSLIDFGKNK
>NZ_CP042432.1|WP_132129867.1|3795337_3796630_+|HlyC/CorC-family-transporter
MLAEVFIILFLILLNGIFAASEIALVSSRKTRLELFIKKGNRAATEAMKLHRSPNKFLSTVQIGITLISILTGLYSGAAFAPFFKQFFVEIPLLAPYSENISVALVVIIITFLTLVFGELVPKRVGLIIPEKFAMAVAWPMTFLGRMVAPFVWLLSTTTDLIIRLFNIRSDKNQVTEEEIKALVEEGVSAGAIEEIEHQIVDRVFNLGDKRVLNLMTYRSDIVWLDINEDPELHKKTILESNHNVYPVCDGEIDNILGIVTVKKLLNIYLGGENPGLKSLLSPASFIHETASAYQVLRQFRQNKTHHAFIIDEYGSLEGMITLNDLLYTLVGTISGDGFSGNEKVQREDGSWLIDGQYPLTDFLQEFDLSAAADEIRGVNTLAGFMILQLRRLPQTGEKLTWNDLELEIMDMDGRRIDKILVRIVKKGEE
>NZ_CP042432.1|WP_132129866.1|3796817_3797489_+|fructose-6-phosphate-aldolase
MKFFIDTANLDQIREAQDLGVLNGVTTNPSLMAKEGITGEENVRAHYKAICEIVDGDVSAEVIATDLEGIIREGESLAALHPKIVVKVPMIREGVKALKYFSGKGIRTNCTLVFSAGQALLAAKAGASYVSPFIGRLDDISTDGLQLIEDIRLIYDNYGFETEILAASVRHPVHILECAKIGADVMTGPLSAILALLNHPLTDKGLAQFLADHAKANKLQETA
>NZ_CP042432.1|WP_132129865.1|3797728_3798019_-|RNA-binding-protein
MNIYVGNLSYKISEEELKEVFEQYGSVDSVKIVRDRDTGRSKGYAFLEMPEESEAQQAIDSLNEQTLGERTMVVNQARPREERAPRPQRNFGSRRY

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Crispr_ID: NZ_CP042432_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_22

3813439-3813556

Orphan

Consensus_repeat	Method
TACAAACTACAAACTAAACAACCCAATAAAACAAATTCCGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_22

>merge|NZ_CP042432|22|3813439-3813556|CRISPRCasFinder
TACAAACTACAAACTAAACAACCCAATAAAACAAATTCCGAAGGCAGAACCCAAAAACCCTAAAAACTACAAACTACAAACTACAAACTAAACAACCCAATAAAACAAATTCCGAAGG

>NZ_CP042432|22|20|3813439-3813556|CRISPRCasFinder
TACAAACTACAAACTAAACAACCCAATAAAACAAATTCCGAAGG	CAGAACCCAAAAACCCTAAAAACTACAAAC
TACAAACTACAAACTAAACAACCCAATAAAACAAATTCCGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132129864.1\|3798124_3798610_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319806
NZ_CP042432.1\|WP_132129863.1\|3798687_3800760_+\|oligopeptide-transporter,-OPT-family	unknown	unknown	gnl\|CDD\|224216
NZ_CP042432.1\|WP_132129848.1\|3819846_3821616_+\|signal-peptide-peptidase-SppA	unknown	unknown	gnl\|CDD\|273226
NZ_CP042432.1\|WP_132129861.1\|3802308_3804606_+\|glycoside-hydrolase-family-92-protein	unknown	unknown	gnl\|CDD\|377950
NZ_CP042432.1\|WP_132129850.1\|3819007_3819259_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	unknown	unknown	gnl\|CDD\|376904
NZ_CP042432.1\|WP_132129847.1\|3821780_3822686_+\|N-formylglutamate-amidohydrolase	unknown	unknown	gnl\|CDD\|377442
NZ_CP042432.1\|WP_132129853.1\|3815606_3816428_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234651
NZ_CP042432.1\|WP_132129852.1\|3816681_3818289_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP042432.1\|WP_132129849.1\|3819281_3819773_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP042432.1\|WP_132129845.1\|3824524_3825565_+\|glutathione-synthase	unknown	unknown	gnl\|CDD\|183536
NZ_CP042432.1\|WP_132129857.1\|3808848_3810219_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042432.1\|WP_132129865.1\|3797728_3798019_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|240845
NZ_CP042432.1\|WP_132129858.1\|3807492_3808830_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP042432.1\|WP_132129862.1\|3800766_3802260_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|198376
NZ_CP042432.1\|WP_132129846.1\|3822689_3824525_+\|DUF1704-domain-containing-protein	unknown	unknown	gnl\|CDD\|369651
NZ_CP042432.1\|WP_132129866.1\|3796817_3797489_+\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
NZ_CP042432.1\|WP_132129854.1\|3815373_3815598_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|132023
NZ_CP042432.1\|WP_132129856.1\|3810351_3812949_+\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|173589
NZ_CP042432.1\|WP_132129855.1\|3813867_3815124_+\|homoserine-dehydrogenase	unknown	unknown	gnl\|CDD\|235783
NZ_CP042432.1\|WP_132129859.1\|3806081_3807482_+\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132129864.1\|3798124_3798610_-\|HAD-family-hydrolase	gnl\|CDD\|319806	cd07503, HAD_HisB-N, histidinol phosphate phosphatase and related phosphatases. This family includes the N-terminal domain of the Escherichia coli bifunctional enzyme histidinol-phosphate phosphatase/imidazole-glycerol-phosphate dehydratase, HisB. The N-terminal histidinol-phosphate phosphatase domain catalyzes the dephosphorylation of histidinol phosphate, the eight step of L-histidine biosynthesis. This family also includes Escherichia coli GmhB phosphatase which is highly specific for D-glycero-D-manno-heptose-1,7-bisphosphate, it removes the C(7)phosphate and not the C(1)phosphate, and this is the third essential step of lipopolysaccharide heptose biosynthesis. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.35262e-62
NZ_CP042432.1\|WP_132129863.1\|3798687_3800760_+\|oligopeptide-transporter,-OPT-family	gnl\|CDD\|224216	COG1297, COG1297, Predicted membrane protein [Function unknown].	3.26365e-110
NZ_CP042432.1\|WP_132129848.1\|3819846_3821616_+\|signal-peptide-peptidase-SppA	gnl\|CDD\|273226	TIGR00705, Protease_4, signal peptide peptidase SppA, 67K type. This model represents the signal peptide peptidase A (SppA, protease IV) as found in E. coli, Treponema pallidum, Mycobacterium leprae, and several other species, in which it has a molecular mass around 67 kDa and a duplication such that the N-terminal half shares extensive homology with the C-terminal half. This enzyme was shown in E. coli to form homotetramers. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	9.05572e-138
NZ_CP042432.1\|WP_132129861.1\|3802308_3804606_+\|glycoside-hydrolase-family-92-protein	gnl\|CDD\|377950	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92. Members of this family are alpha-1,2-mannosidases, enzymes which remove alpha-1,2-linked mannose residues from Man(9)(GlcNAc)(2) by hydrolysis. They are critical for the maturation of N-linked oligosaccharides and ER-associated degradation.	0
NZ_CP042432.1\|WP_132129850.1\|3819007_3819259_+\|phosphoribosylformylglycinamidine-synthase-subunit-PurS	gnl\|CDD\|376904	pfam02700, PurS, Phosphoribosylformylglycinamidine (FGAM) synthase. This family forms a component of the de novo purine biosynthesis pathway.	4.51146e-33
NZ_CP042432.1\|WP_132129847.1\|3821780_3822686_+\|N-formylglutamate-amidohydrolase	gnl\|CDD\|377442	pfam05013, FGase, N-formylglutamate amidohydrolase. Formylglutamate amidohydrolase (FGase) catalyzes the terminal reaction in the five-step pathway for histidine utilisation in Pseudomonas putida. By this action, N-formyl-L-glutamate (FG) is hydrolyzed to produce L-glutamate plus formate.	1.59529e-21
NZ_CP042432.1\|WP_132129853.1\|3815606_3816428_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234651	PRK00125, pyrF, orotidine 5'-phosphate decarboxylase; Reviewed.	1.03794e-85
NZ_CP042432.1\|WP_132129852.1\|3816681_3818289_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP042432.1\|WP_132129849.1\|3819281_3819773_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	1.3531e-53
NZ_CP042432.1\|WP_132129845.1\|3824524_3825565_+\|glutathione-synthase	gnl\|CDD\|183536	PRK12458, PRK12458, glutathione synthetase; Provisional.	9.15293e-156
NZ_CP042432.1\|WP_132129857.1\|3808848_3810219_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.57112e-28
NZ_CP042432.1\|WP_132129865.1\|3797728_3798019_-\|RNA-binding-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	4.46605e-34
NZ_CP042432.1\|WP_132129858.1\|3807492_3808830_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.56553e-36
NZ_CP042432.1\|WP_132129862.1\|3800766_3802260_+\|carbohydrate-kinase	gnl\|CDD\|198376	cd07810, FGGY_D-XK_2, D-xylulose kinases, subgroup 2; members of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17). They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_CP042432.1\|WP_132129846.1\|3822689_3824525_+\|DUF1704-domain-containing-protein	gnl\|CDD\|369651	pfam08014, DUF1704, Domain of unknown function (DUF1704). This family contains many hypothetical proteins.	4.72707e-104
NZ_CP042432.1\|WP_132129866.1\|3796817_3797489_+\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	1.21729e-148
NZ_CP042432.1\|WP_132129854.1\|3815373_3815598_-\|PspC-domain-containing-protein	gnl\|CDD\|132023	TIGR02978, Phage_shock_protein_C., phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects. [Cellular processes, Adaptations to atypical conditions].	0.00152736
NZ_CP042432.1\|WP_132129856.1\|3810351_3812949_+\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|173589	PTZ00398, PTZ00398, phosphoenolpyruvate carboxylase; Provisional.	0
NZ_CP042432.1\|WP_132129855.1\|3813867_3815124_+\|homoserine-dehydrogenase	gnl\|CDD\|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	2.26351e-95
NZ_CP042432.1\|WP_132129859.1\|3806081_3807482_+\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	3.04058e-46

>NZ_CP042432.1|WP_132129856.1|3810351_3812949_+|phosphoenolpyruvate-carboxylase
MNPSQALENFNQDVVAKYQIYNSLFLTLPFKDVANTAVILPLLASHCENGFEKGKNPRQIIDDFFSQHTGLKTEKEKIDVLFRFIQFIERQVVLFDSIEDAAFSNVNDLEGVGSLRYLFTETQQKKRVDQLKNKMEDFKVRLVLTAHPTQFYPGAVLGIITDLAQAIKENDLTSINLLLQQLGKTPFFKKEQPTPYDEAISLIWYLENIFYKAIGNIYREIKSHMPEDGESVTVNNIFDLGFWPGGDRDGNPYVDAETSLRVADSLRVAVLKCYSRDLRRLRRRLTFNQVDKVIGELEEKMYDISFLQKDPSILPTDELFQKLLEIRDIVIRQHNSLFIDQLDSLISKVRLFGYHFATLDIRQDSRVHHQVLLNIIRQYKKNTGNDLLPPDFAELPSGQQIELLSKVEGKLNPDIFDDKITRDTLESIYAIKTIQEKNGERGANRYVISNCQSVLNVMEIYAMIRLCGWSREEVKIDIIPLFETIDDLVNAPDIMEELYRNPYYAEHLRRRGNRQTIMLGFSDGTKDGGYLMANWSIYKAKEALSAVSYKYGIKVSFFDGRGGPPARGGGKTHKFYSSLGTEIETAEIQLTVQGQTISSNFGTIESARFNMEQLLTAGISNELFADTKYQLSDEDKNLLQELGDLAYDSYKELKAHPKFIEYLVRVGTLKYYGKTNIGSRPTSRKKSDVFRFEDLRAIPFVGSWSQLKQNVPGFYGVGTALSRFEEMGKMDAARRLYKKSEFFRTLIDNSMMSMSKSYFPLTHYLEKDPEFGEFWKKLYSEFKLTKKYLLDVSGSDELMDSYPVERASIKIRERIVLPLLTIQQYALNRLHELENNDQDPELRATYEKMVTRSLYGNINAARNSA
>NZ_CP042432.1|WP_132129857.1|3808848_3810219_+|Gfo/Idh/MocA-family-oxidoreductase
MNAKNTSRRQFIRLSAAGGAGFMMGAMGFSKSSYARILGANDRVNVGVVGFSDRFRSSLLPSFVSSSKELNFDIIAVSDIWNRRREEGKAQIAEKIGHSVQACVNNEELYKIKDLDAVIIATADFQHAYHTVEAIENNCDVYCEKPFAETMADAKAALKAVKGSDRVFQVGTQRRSGSNYHAAANFIQDGKFGPITIVEMSWNVNQPGRWRRPELVAAIRESDTDWGRYLVSRPKDTWDPRKYLEYRLFWPYSSGIFGQWMTHQIDTVHWFSGLKHPRNVVANGGIYQWKDGRSNADTLTAVFEYGPEDQPDTGFQVVYSSRFHNSAGGIKELYYSNGGMIDIDNNKVSPNGGLQENHASAMGMKPNLLPEIELASEAQKVETAANTGGDSLTWSHVRNWMECVRAREKATNAPIEAAYSHSIALIMANAAYRTGEKATFDEKKQEVMAGNKLFVY
>NZ_CP042432.1|WP_132129858.1|3807492_3808830_+|Gfo/Idh/MocA-family-oxidoreductase
MTVRRRDFIKTSALAGAGIGLGALNFPLFGKNAPNEKLVAGIMGTNSRGGHLAGVLAGMDGVEVGYICDVEEKALAKGVKAVTDKGGKAPKTFSDVRKLLEEKALDVLVIAAPDHWHAPAAILACQAGKHVYVEKPCSQNPFEGELLIEASRKYDKFVQMGNQRRSWDKIMEAIGLVHEGIIGKAYFARGWYANNRGPINFGKEVPAPPNLDWDLWQGPAPRKNYRDNIVHYNWHWFWHWGTGEACNNGTHEIDCMRWALDVDYPTKVVSAGGRYQYRGQDDWQTTDTQVISIEFGEEKALTWEGRSCNKFPVQGSGRGFIVYGEKGTLVTDGGNSYEFYDQDNKLIKKKESSDKADSTNVVSPGGAGLDAVHLNNFLETVRGNASLHSDIEEGHKSVLLCHLGNISQRVGRALHLDPSNGHIKGDKEAMKLWQRSYEKGWNPNV
>NZ_CP042432.1|WP_132129859.1|3806081_3807482_+|DUF1080-domain-containing-protein
MSKKQIKPVLATILAGMGLLATMISCTSSTGGQKDDGWVDLFNGKDLSGWEQVNGTAEYRVENGEIVGTTVTGSPNSFLATDREYGDFILELEFMVDSTINSGIQFRSIHDSSVMKGRVHGYQFELDPSDRAWSAGIYDEARRGWLYPLSLNPEAQGAFKQGEWNKARIECIGSSIRTWLNGVPAANLQDDLTLSGLICLQVHSIGNNENEVGKEIRWRNIRIKTENLQPSAPDDIFVVNNLPNSISEQEKAQGWTLLWDGKTTEGWRGAHKETFPESGWTIKEGVLCVEESDGAESQNGGDIVTTGEYSTFELQLDFKLTEGANSGIKYFVTENYDVKNASAIGLEYQLLDDKNHPDAKMGRNGNRTLASLYDLIKADKEGRFVRGPGEWNHARLVVNPDNKVEHWLNGRKVVEYVRGSQEFRDLVAISKYKDWENFGEAEKGHILIQDHGNNVCFKSIKIRELK
>NZ_CP042432.1|WP_132129861.1|3802308_3804606_+|glycoside-hydrolase-family-92-protein
MNGTFRAFALIFLYMGSSCSQAQQTKQDYTQYVNTFIGTAPLTDPDFIGYTPPEGWRVWAGLTYPGSSLPNAMVQLSPVTEYGTGAGYQYEDGEIIGFTHTNKGHWNLCNIPILPLSGDARFPYASSFSHDQERASPAYYEVFLEDYKVNARLSSTLRCGIHEYTWEDPAAGRRILFDLGKANNRVSDWEINTVSANELEGFQRVGNDKIHFYVRLSQPVEDLEVVRMGERDGYAIVKLAGGGKAAGEENQDTEDPGTEGPVEEAAGEETANEKDLAGKEGSGAQNGPVLLKIGLSYVSAVNAAENLREEIGSKSFEDIHSEGREAWNALLLKIAIKGGTEKQKELFYSSLYRSFLWPALRSDINGQFRDVKGKVQQEDFNYYTNPSFWDTYRNKLVLLSIVSPRVTEDVIKSLIDKGEKTGFIPTFFHGDHAAAFIAGTYLRGSRGFDAEKAFGLLLNNAYKEGGSRPYISEYIEKGYISDPDVEHPHVETKGKAGVSKTLEYAYDDYSLALLAAALDDTLHYRELMDRSGNYRNVFDTRVNFMRGKLENGAWIQPFNPEYPYYEYMYREASAWQVSFYVPHDMPGLIELYGGKEAFEAKLDSLFTLPWNPDYIARNVSSFLGQYSQGNQPDHEAPFAYYFIGKPAKSQRVIDTLLENYYGVGEEELALPGMDDAGEMSSWYVFASLGLYPYSPADPEYLVSVPVFDEVAWKLENGKSVIIRKSGKSRKMSRILVNGKENEGYFIPHDLFLKGGTIEVQTAPRN
>NZ_CP042432.1|WP_132129862.1|3800766_3802260_+|carbohydrate-kinase
MKRYLLGFDIGSSSIKAALVDAETGKTAAHAFSPETEMPISSPRPGWAEQHPESWWQEVISVSGKLRRQLDFKPEEIAAIGISYQMHGLVLVDKDQQVLRPSIIWCDSRAVAAGNQAFGDLGKKFCLEHFLNSPGNFTASKLKWVRENEPLVYEKTDKFMLPGDFIAMKMSGEACTTYSGLSEGILWDFLEEKPAQSLLDHYGIDARLIATPKPTFSIQGHLQEGPAELLGLKAGIPIAYRAGDQPNNAFSLNVLEPGEVAATAGTSGVVYSISDKNVHDKQSRVNPFAHVNHTPAHKRLGILLCINGTGILNSWVRKNFGSDLSYEEMNLLASRVPPGADGVSILPFGNGAERMLENRYTGSVISGLDFNNHERGHVFRAAQEGIAFAFRYGMELMQQLGTDTRVIRAGNANMFLSPVFRETLSSLTGATIELYDTDGAAGAARGAGVGAGIYSSPSEAGRYLQRINLVAPQQSQAGALEEAYQAWKLQLLEKLQA
>NZ_CP042432.1|WP_132129863.1|3798687_3800760_+|oligopeptide-transporter,-OPT-family
MPQETENLKPYIAAETRIAELTVKAVLIGALFGIIFGASTVYLALKAGLTVTASIPIAVLAISLGKKIFRTTILENNIIQTTGSAGESIAAGVVFTLPGFLFLTAGTGGESIGSQYFAYWTIFSLAALGGVLGTLMMIPLRRSLIVREHHALPYPEGTACASVLIAGEKGGEFARTAYLGLGVATLYAILQKIFQVIAATPGLVSRQTSKFFPSATLNADITPEYLGVGYIIGPRIAGVLVAGGVLAWLGLIPLLASVMPMETIAAQLVKLGYLSDIATPGGAGGWDPQTRTFADTPGAIYTAYIRQIGAGAVAAGGFMTLLKTIPTIISSFRESLGSIRAGDTEGKKRTQDDLSFKIVIFGSLALVVLIMLLPQIPGGTWYNKLLLAFLIVVFGFFFVTVSSRIVGLIGTSSNPVSGMTIATLMGTCLIFIAFGLTGSAFEPMVLVVGSMICIAAANAGNTSQDLKTGYILGATPKFQQIALFIGVLVSSVAVGVTINILDQPTPDMAAAGIQHAIGTTEYPAPQGTLMATLIRGLLSFNLDWQFVLVGVFLALTIELCGVSSLSFAVGAYLPLSTTLPIFAGGAVRALVNLRTRNKKQSLAEEELGKGNLFATGLVAGGALAGVLIALLSSSDAVYIWLENTGQAVSSRLSEFFGNGGYQLLGVAFFALMAGILYKTGVRKQEVDLKK
>NZ_CP042432.1|WP_132129864.1|3798124_3798610_-|HAD-family-hydrolase
MNKAVFLDRDGVLNRELGDYVCRLEDFEVLPDVAKALRILRDRGFLLIVVTNQGGIAKGWYSHEVLHRMHEKLREELSREGVTLSEIYYSPQHPLHTGNSLCRKPGSLMLEKALARFDIDPSRSYLIGDRERDVEAAEKVGIHGILIESDQSLLSIMDEIN
>NZ_CP042432.1|WP_132129865.1|3797728_3798019_-|RNA-binding-protein
MNIYVGNLSYKISEEELKEVFEQYGSVDSVKIVRDRDTGRSKGYAFLEMPEESEAQQAIDSLNEQTLGERTMVVNQARPREERAPRPQRNFGSRRY
>NZ_CP042432.1|WP_132129866.1|3796817_3797489_+|fructose-6-phosphate-aldolase
MKFFIDTANLDQIREAQDLGVLNGVTTNPSLMAKEGITGEENVRAHYKAICEIVDGDVSAEVIATDLEGIIREGESLAALHPKIVVKVPMIREGVKALKYFSGKGIRTNCTLVFSAGQALLAAKAGASYVSPFIGRLDDISTDGLQLIEDIRLIYDNYGFETEILAASVRHPVHILECAKIGADVMTGPLSAILALLNHPLTDKGLAQFLADHAKANKLQETA
>NZ_CP042432.1|WP_132129855.1|3813867_3815124_+|homoserine-dehydrogenase
MSDSSKTRLGVFGFGCVGQGLYNVLSHSKGIKAEIRKICIKNASKKRSLPEHYFTLDKNELLFNDDIDVIVELIDDPVAAFEIVKTALQNGKAVVTANKKMLADNFEELFRLQLSSNVPLLYEASCCGCIPIIRNLEEYYDNDQLSAVEGVFNGSTNYILTKMFRENVSFETALSEAQVNGFAESDPSLDIDGYDAKYKLGIILAHSFGLFVKPGQLFNYGITHISDFDANYAKEKGYKIKLIAFCRKIGNTIAAGVLPRFITPESKLFGIDYEYNAVMVESIFSEYQYFVGKGAGSNPTGSAVLSDISALTYNYKYEYKKYQLHENLQVSNDFFINLYIRYNPANPLPPDIFEEVHEQYVSHNNAYMIGSVHFDRLVNSGIWEREDVNIITAAEPGIHGAAAAAGKSQEAELAISNK
>NZ_CP042432.1|WP_132129854.1|3815373_3815598_-|PspC-domain-containing-protein
MLQQMISYVERQSFGVCTYLADRFNISLGKLRLFFIYSSFLAVGFPIIFYLLAGIVLDIRRYVSFRRKSSIWEL
>NZ_CP042432.1|WP_132129853.1|3815606_3816428_-|orotidine-5'-phosphate-decarboxylase
MTREELFEEIKKKRSFLCVGLDTDIDKVPSHLLKEEDPVFEFNKQIIDATKDLCIAYKPNIAFYECRGVVGWESLRKTLEYIPKEIFTIADAKRGDIGNTSLMYARTFFQPESSGLDFDSVTVAPYMGIDSVAPFLGFEGKWAIVLALTSNEGNKDFQYLETEDDFLFEKVITTSREWAGPDRLMYVVGATQPDAFADVRKLAPDHFLLVPGIGAQGGNLSEIAECGLNGQCGLIVNSSRGIIYASGAEDFADKARMQAKKLQEEMQHLLEKM
>NZ_CP042432.1|WP_132129852.1|3816681_3818289_+|transcription-termination-factor-Rho
MFNESELNAKLVAELREIAKTLNISDYDELRKQQLIRSIVEKQKSESEPAEPSAPSPETAEKTNGSNSNSNTSANGNDKAKRGRRARIRKGDEKGEEKAESPLMASEERYSAPNKEEIVQRSAGGSASEAERIPYSEKRPDKGNEEKKAQRPRVEQPASTSSLDFDNVIINEGALEIMPDGYGFLRSADYNYLTSPDDIYVSQSQIKLFGLKTGDTVRGNIRPPKEGEKYFPLVRIEAINGRGPAEVRDRVPFDYLTPLFPYEKFNLVTKMDNYSTRLMDLFTPIGKGQRGLIVAQPKTGKTQLLKDVANSIAANHPEAYLIILLIDERPEEVTDMARSVRAEVISSTFDEPAERHVKIANIVLEKAKRMVECGHDVVILLDSITRLARAYNTVAPASGKILSGGVDANALHKPKRFFGAARKIENGGSLTILATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLSNKRLFPAIDITASSTRRDELLLDKEALQRVWILRNHLADMNSQEAIEFLLSQMRGTKDNDEFLVSMNS
>NZ_CP042432.1|WP_132129850.1|3819007_3819259_+|phosphoribosylformylglycinamidine-synthase-subunit-PurS
MKFIAEINVMPHKEILDPQGKAVTKSMVNLGLNEIQNVRIGKHITLEIESPDQESARAKVDEACRKLLANLIMESYDFTLRQA
>NZ_CP042432.1|WP_132129849.1|3819281_3819773_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MGEVYLSLGSNQGNRQANLQAALKKLEVLLGKPVKVSGIYRTAAWGKTDQPGFLNQVLSFHMEPGQETWLLQRILETEMALGRVRKEKWEARAIDIDILLAGEKVINTETLTVPHPWLHLRRFVLVPLNEIAPDLLHPVLDKTIRELLEICPDRLEAEKIADS
>NZ_CP042432.1|WP_132129848.1|3819846_3821616_+|signal-peptide-peptidase-SppA
MKQFFKFMFASMLGVFFSFLLLLVFFFIFLAALFSAGAADETITLSGNTLLVASFNQNIPERTPQSPFPGLDLPGVRNVTGLNDILANIRKAESDKNIKGIYLDLSYVPEGLATIEEIRNALQKFRESGKFILAYGEVYSQTAYYLASVANKIYLHPEGALDFSGLSTDVVFFKGLLEKLEIEPQVIRVGAYKSAVEPFTEEQMSEASREQMNSYLQDLYQHFLASVATSRGISRDSLHLIADSLLVRQPSDALAYRMIDGLKYKDQVIAELKKMTGTPKENDMETVTMGAYTRAAGESSSKQGIPERIAVIYATGEIVSGEGSDFLIGSERLSRAIREARRDDEIEAIVLRVNSPGGSALASDVIWREMSLAKEEKPVVVSMGNTAASGGYYISCAAHKIVAQPNTLTGSIGVFAVIPNMQGFFNHKLGLTFDGVKTGAYSDLGTITRPLTPGEKAIVQEYINDVYADFTGHVAKGRGMTLPEVDSVARGRVWSGIGAVEAGLVDTLGGIRDALEIAAGMAGTENYRVIEYPSQKGPLEELLNNMGGNIRTWMVKQELGENYRYFETLKQLPRLSGVQALLPFEIEIR
>NZ_CP042432.1|WP_132129847.1|3821780_3822686_+|N-formylglutamate-amidohydrolase
MPLTSGKLRAPEYLGPAGLQREDPGPGSKYNKNWHGSSLVISMEPFVIAEGKSPVITAAIHEGHMIREELLPYMNLEEHERSREEDPYTDFLSEISGSRVIVNISRFETDMNRPREKAVYLRPEDAWGLNVWKQALPPELINRSLESYDAFYTGMKTLLNSIIDRFGHFVVLDLHTYNYRREGTAAEASEADNPEINIGTAHNHPRWSELTRHFIQTLSGAKINGQTPDVRENIKFKGGEFSRWINRNYGAFGFVLSIEFKKTFMDEFTGIVDIYHLRDIRRALNFTMDELAEQLELTGSK
>NZ_CP042432.1|WP_132129846.1|3822689_3824525_+|DUF1704-domain-containing-protein
METGQKKIGERILNRLKKDKPVHVKLPGGGIINMDSPVPFLLVYRMPPDEKDLFTLQLGKTESSYLMAEGSSDLSALVNELSQELADRFGAFMLLEVWVTDKKDADDFTVHFNHEGAKSIAESLQSELDAIRIGRTRLSASLKEGGSPAPPYFSPVLNKKQAKRSEIIMVGLEIKPIYINPDTGRSYPLFLRELRKAFGKAVRKTFFEFIRLHTSHNASHFEMLGKTVIEDIVWDIDKELAGYSNQFNFLFLVTPVNLDEAWKAFEKSDFRKNPVFHYRPMPIDPELIKRKLYNLPIEKISDPTIAFLFRDKRKEIDRMLNMMAEREKPDFMHSSLQLFGRIDDHLVETAQALLVAIPPPGDDPKKKFLTAEKFAAMARAELKYLQKQCPDMASEVHIREDIEGILVSRGVLWISDEFKVSRERAKGLIQHEVGTHIVTYYNGKAQPFRLFYTGVPGYEQLQEGLAVLAEYIMDGLTNQRLRTLAARVVAVDYMVTGHSFVETFHLLRGKYHFPPKNAFTTTMRAFRGGGLTKDAVYLKGFLNLLEYIRGGRELEPLLIGKIQEDYLPIVEELIHRKLLKPIPVRPRYLEKEFREKTEILKKDITIFNMIG
>NZ_CP042432.1|WP_132129845.1|3824524_3825565_+|glutathione-synthase
MKIGFIVNQVKKEDPNFTTTGLAWTAHKRGHEVYYMGVGDLAYYSDEQVGAHARKVPDKKFNTRATFMDGVKSAAKEKITSAGLDVLMLRNDPAEDIEKRSWAQSAGMIFSQMAVKQGVIVLNDPQALSTAINKMYFQHFPEIVRPKTIISRNVEDIKAFFEETRHKMVMKPLQGSGGRNVFLVTKKEASNINQMFEAISRDGYVVGQEYLEEAKQGDIRLFLMNGSPIEVKGKIAMLNRLQKEGDIRSNIHRGGKAFKGQISDTMLELAESVKPKLIKDGMFLVGIDIVGNKLMEINVFSPGGLGNASELHKTDFITPVIEAIEKKVAYKKIYGDNISNVRIATI

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Crispr_ID: NZ_CP042432_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042432_23

4295071-4295190

Orphan

Consensus_repeat	Method
ACCTTGAACTTTAAACTTCAACGTCAGCAACTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042432_23

>merge|NZ_CP042432|23|4295071-4295190|CRISPRCasFinder
ACCTTGAACTTTAAACTTCAACGTCAGCAACTTCCAAAAACTAGAAACTAACTAAAAACTAAAAACTGTTAAACCTTGAACTTTGGACCTTGAACTTTAAACTTCAACGTCAGTAACTTC

>NZ_CP042432|23|21|4295071-4295190|CRISPRCasFinder
ACCTTGAACTTTAAACTTCAACGTCAGCAACTTC	CAAAAACTAGAAACTAACTAAAAACTAAAAACTGTTAAACCTTGAACTTTGG
ACCTTGAACTTTAAACTTCAACGTCAGTAACTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042432.1\|WP_132130437.1\|4296844_4297507_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP042432.1\|WP_132130371.1\|4280502_4281525_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_CP042432.1\|WP_132130362.1\|4292390_4293281_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|223619
NZ_CP042432.1\|WP_147698397.1\|4302828_4303449_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130355.1\|4299233_4299746_+\|DUF937-domain-containing-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130438.1\|4279216_4280473_+\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|224436
NZ_CP042432.1\|WP_132130356.1\|4298240_4299125_+\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP042432.1\|WP_132130358.1\|4295637_4296729_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NZ_CP042432.1\|WP_132130357.1\|4297553_4298045_+\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NZ_CP042432.1\|WP_132130364.1\|4290599_4291628_-\|type-I-asparaginase	unknown	unknown	gnl\|CDD\|181876
NZ_CP042432.1\|WP_132130367.1\|4284737_4287242_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|178056
NZ_CP042432.1\|WP_132130360.1\|4294356_4294776_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|184734
NZ_CP042432.1\|WP_132130369.1\|4282452_4283583_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP042432.1\|WP_132130354.1\|4299854_4300601_-\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|234635
NZ_CP042432.1\|WP_132130363.1\|4291624_4292389_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635
NZ_CP042432.1\|WP_147698398.1\|4303454_4304420_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042432.1\|WP_132130353.1\|4300694_4302641_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_CP042432.1\|WP_132130368.1\|4283729_4284710_+\|ribonucleoside-diphosphate-reductase	unknown	unknown	gnl\|CDD\|215272
NZ_CP042432.1\|WP_132130359.1\|4295261_4295552_-\|DUF721-domain-containing-protein	unknown	unknown	gnl\|CDD\|377496
NZ_CP042432.1\|WP_132130361.1\|4293282_4294290_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	unknown	unknown	gnl\|CDD\|223691

Protein	Function_ID	Function_description	E-value
NZ_CP042432.1\|WP_132130437.1\|4296844_4297507_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.84428e-09
NZ_CP042432.1\|WP_132130371.1\|4280502_4281525_-\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	8.28296e-140
NZ_CP042432.1\|WP_132130362.1\|4292390_4293281_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|223619	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones].	6.37271e-47
NZ_CP042432.1\|WP_132130438.1\|4279216_4280473_+\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|224436	COG1519, KdtA, 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane].	3.98565e-64
NZ_CP042432.1\|WP_132130356.1\|4298240_4299125_+\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NZ_CP042432.1\|WP_132130358.1\|4295637_4296729_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	6.53178e-106
NZ_CP042432.1\|WP_132130357.1\|4297553_4298045_+\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	3.77882e-74
NZ_CP042432.1\|WP_132130364.1\|4290599_4291628_-\|type-I-asparaginase	gnl\|CDD\|181876	PRK09461, ansA, cytoplasmic asparaginase I; Provisional.	9.44269e-113
NZ_CP042432.1\|WP_132130367.1\|4284737_4287242_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|178056	PLN02437, PLN02437, ribonucleoside--diphosphate reductase large subunit.	0
NZ_CP042432.1\|WP_132130360.1\|4294356_4294776_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|184734	PRK14545, PRK14545, nucleoside diphosphate kinase; Provisional.	3.91588e-69
NZ_CP042432.1\|WP_132130369.1\|4282452_4283583_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.39971e-07
NZ_CP042432.1\|WP_132130354.1\|4299854_4300601_-\|segregation/condensation-protein-A	gnl\|CDD\|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	4.93452e-51
NZ_CP042432.1\|WP_132130363.1\|4291624_4292389_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	2.74714e-98
NZ_CP042432.1\|WP_132130353.1\|4300694_4302641_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP042432.1\|WP_132130368.1\|4283729_4284710_+\|ribonucleoside-diphosphate-reductase	gnl\|CDD\|215272	PLN02492, PLN02492, ribonucleoside-diphosphate reductase.	0
NZ_CP042432.1\|WP_132130359.1\|4295261_4295552_-\|DUF721-domain-containing-protein	gnl\|CDD\|377496	pfam05258, DUF721, Protein of unknown function (DUF721). This family contains several actinomycete proteins of unknown function.	2.19751e-18
NZ_CP042432.1\|WP_132130361.1\|4293282_4294290_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	6.50979e-49

>NZ_CP042432.1|WP_132130360.1|4294356_4294776_+|nucleoside-diphosphate-kinase
MISNKTFTMIKPDAVKAGHLGAILHDIIQAGFKVTALKFTRLSPELAGKFYDIHRERPFYQDLVTFMSSGPILAAILEKDNAVEDFRKLIGATDPQKAEEGTIRRKYAASIQENAVHGSDSNENGQIEGSFFFSEFEKV
>NZ_CP042432.1|WP_132130361.1|4293282_4294290_-|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA
MESYTLLKPALMTPRRIVITTHHKPDGDAMGSSLALYHYLLQKGHTVHVITPSDYPYFLHWLPGNAEVVVFTAQQQKAKELVKEAELIFCLDFNNLKRINELGEVIAGSSAPKVLIDHHLEPENFDQFRLWNSKACATAELIYEFITGLGDSPLIDKAIATCLYTGIMTDTGSFRFPSTTAAVHRIIASLIDAGAENSRIHELIYDTSSESRLRFLGYCLSEKLEVLPAYRTGLIAVSREELERFQVTTGDTEGIVNYALSIYNIKFAALIIDRSEVVKLSFRSKGEFPANEIAKKYFEGGGHRNAAGGQSKDALDEVVKKFKSVLEEYKELLNQ
>NZ_CP042432.1|WP_132130362.1|4292390_4293281_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MNSKITCILLAAGSVMVGCGKSGTTDDGLSYKIHTKNNGKEINEGDYVKFHLVYKTENDSVLQSSYDRGTPFEALIDSMSFQGAPTFEYLYHALKMMTLKDSATFHMKSDSLFSTDTTFTPGMAKPPRPPFIRPGSNVTMVVKVEEVKTKEEIEQELKEKRDKQTGLEADTINQYIEEHDLEVKKTPAGIQYHISNETDGPRPTSGDTVVVHYTGTLLDGTKFDSSYDRGEPISFALVKGAVIDGWYEGIPLFRKGEKGILIIPSAYGYGEFGSGPIPSNSPLVFEVELVDIKPKK
>NZ_CP042432.1|WP_132130363.1|4291624_4292389_-|TatD-family-hydrolase
MLTDTHTHLYLPDFDGIREEVMKRAFEAGVERMFLPNIDPDSIDPLIGLCRQYPENCFPMLGLHPCSVKAGFLKDLEKVERAIEQYGCLAIGEIGIDLYWDTSLLKEQEEAFRIQVNWAIERDLPVVIHSRESFKEICGVLEEEKHPRLRGIFHCFTGTYEDACRAIDMGFYLGIGGVITFKKSELPQVLSKISLDHVVLETDSPYLAPAPYRGKKNESSFLVHIAARLADIYDLPEQEIAARTTANSRLIFGI
>NZ_CP042432.1|WP_132130364.1|4290599_4291628_-|type-I-asparaginase
MTRILIIYTGGTVGMMQDASSKTLRPIGFEEIKNNFPELERLNYEWEVHTFDPPLDSSNMNLEVWAKIAGIIEENYLLYSGFVILHGSDTMAFTASALSFMLENLAKPVVLTGSQLPIGAIRTDARENIITAMEIAADRTGNQATVPEVGIYFDYQLFRGNRAKKYNAEKFEAFYSMNYPALAEAGVAIKYRHQNILSPPEKPLRVHKTLKPDVAVLKIFPGITERTVEAVLNTPGIRGVVMETYGSGNTFTAPWFINSLTRAIQRGLLILDITQCDGGAVELGRYETSKHLLEAGVTSGFDMTFESAITKMMYLLSFDLPAKELRKLLETPLRGELTAPAR
>NZ_CP042432.1|WP_132130367.1|4284737_4287242_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MFVIKRNGKQEAVKFDKITARIEKLCYGLNQEYVDPVEVAKKVIEGIYDGVSTTELDNLAAETAAALTTRHPDYALLASRIAVSNLHKNTRKSFSETMKLLYEYTDRNSGQAVPMLAESTYRTIQQHADILNSTIIYDRDFSFDYFGFKTLERSYLLRVDGKVAERPQHLFMRVAVGIHQGDIESVLKTYDLLSEGWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLRQTAKISQSAGGIGLAIHNIRATGSYIGGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIYLEPWHADVLEFLDLRKNHGKEELRARDLFYALWIPDLFMQRVEADAGWSLFCPHEAPGLQDCWGEEFESLYRKYEEGGKARKTVKARELWFRIMESQIETGTPFLLYKDAANRKSNQQHLGTIKSSNLCTEIIEYTSPDEVAVCNLASLALPRYVNQGQFDHGKLFDVTYQATLNLNKIIDGNYYPVPEAERSNMRHRPIGLGVQGLADTFIKLRLPFESPEAAALNRAIFETIYFAALSASADLAGKEGAYETFAGSPAAKGILQFDMWGVHPSERWDWAALKETIARQGLRNSLLLAPMPTASTSQILGNNECFEPFTSNIYTRRVLSGEFIVVNKYLLNDLVELGLWNEQVKNKIILAGGSVQQLEEVPEELKSLYKTVWEISQKTLIDMAADRGAFICQSQSLNLFLNDPNFAKLSSMHFYAWKKGLKTGMYYLRSQAAAQAVKFSIEKQAGQQLEPLTSKGSGQAGSASGPAWGEKFPASNERNGLAGQEESQVSGEPGGLPRPETELSPALASAPSCNMEEGCLSCGS
>NZ_CP042432.1|WP_132130368.1|4283729_4284710_+|ribonucleoside-diphosphate-reductase
MNSFDPQTEPLLQENQDRFVLLPIKYRVIWEMYKKAEASFWTAEELDLSPDLKDWENLNDGERHFISHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSEVYALLIDTYVKDPREKDKLFHAIETIPCVQKKAEWALRWIEKGNFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRDEGMHCEFACELYRMLNNKLPQEKVYEIIRDAVEIEKEFVSDALPVNLIGMNAKLMTQYIEFVADRWIGELGYPKIFHAANPFDFMELISLQGKTNFFEKRVGDYQKSGVMSQKESRTFTLDEDF
>NZ_CP042432.1|WP_132130369.1|4282452_4283583_-|glycosyltransferase
MILTLTYAVFLFLILRFCMVLFNFISNPKLPSAPRNYYDFVSILIPSYVSLSQLAGLLQSIREQDFENYEVLIYGDGSGELRQVAAMAAGRDARVRILEPAGPGSPESAEIPEMPWLNEGAGSAGRAQSERAEKKCRFLASRAKGDYLLFLNRVERVERGLIYNALYRAKIHSLGLLSLFADQKMKTFAEGQLVPSLNYLLVSLLPLRLILLTRWKWLAAGSGQFLLFDARHYQAFQWHSQTGSSGPDASDIMKKMKELGFRVEALFANGYVSGRIYTGKRCFGAFRKDVLSGFEGNIPVMFMYLLLCCLGPLCLMPLLSMQLLGMGLTLVTGMRIMSSLMANQPVWWNLLFHPLQMACLAAAAGASIFRIVRKNN
>NZ_CP042432.1|WP_132130371.1|4280502_4281525_-|ferrochelatase
MIKTKKGILLVNLGTPDSPGTSDVRKYLREFLLDPRVLDIPAFNRYFLVNGIIAPFRAPRSGASYKEIWDKEKGSPLMYYSIRQKELLQEKLGDGYQVELAMRYQQPAIASALEQFRKEKVFHIRVLPLYPQYASASGGTVNQKVMEEVGKWQVVPEISFVNSFHDHPLMIETFADLGRKHNPSSYDHILFSFHGLPVRQLRKADPSGRHCQQVAGCCSRININNRYCYSAQCHDTARLIASRLDLPEERYTVCFQSRLGKTPWVEPYTSDVLKRLAAEGKKRLLVFCPAFVADCLETLYEVSTEYDEEFRALGGEKVQLVESLNDHPKWIDAMADLARY
>NZ_CP042432.1|WP_132130438.1|4279216_4280473_+|3-deoxy-D-manno-octulosonic-acid-transferase
MVFLYNWGIKLLHGLARLSAFFGNGKTRKWLRGQASVFPALENMPSRPRKAIWFHFASLGEFEQGRPVLERIKENHPGQAVVVSFFSPSGYEIRKNYPLADLVTYLPLDTPGNARRFIELVQPSCAIFTKYEYWFHFYRELKRQEIPLFVISAIFRKEQVFFRWYGGFFRKILACVTRFFVQTDESRQLLASIGFSNSQVSGDTRYDRVYENSLMPQSFPEIARFAAGSHCLVAGSTWPQEEEMLARYLQRGQGWKYIIAPHEVTEEHLRAVLARFGKDAVRYSEWINNSSMPAPAVLVIDRIGMLSSIYRYGEIALVGGGFGKGIHNILEPAVFGMPVLFGPRYKKFSEAHQLIEAGCAFPVTNFEEFARKLQLLQSDEDLRRKAAEAAQNVITQNKGATSLILESIGFSSAAGKKS
>NZ_CP042432.1|WP_132130359.1|4295261_4295552_-|DUF721-domain-containing-protein
MKKGNEHSLKEAVDLLLETYKIKGKFQETAIVAHWEEIMGKTIASRTTELFIKDKKLFLKLNSSVLRNELQMARQKIIELLNDRAGSEIIREVVFL
>NZ_CP042432.1|WP_132130358.1|4295637_4296729_-|DNA-replication/repair-protein-RecF
MYLEKLQLLNFKNYTDAELEFSPSVNCFAGNNGAGKTNLLDGIHYLSLCKSYFNPIDSQQIRYGQDLFVIQGTFNKNEAEEKVYCGLKRNQKKQFKRNKKEYQRLADHIGLFPLVMISPNDGELVTGGSEERRKFVDNVISQTDNSYLDTLIQYNKTLSGRNALLRSDGAGYDPDLLEVFDEQLVRYGEIIYRKRSEFLELFTRLFHTHYEFITGNAESIALKYESGLSSTEFAEGLRRARERDYHLQRSTFGIHKDDLVFSIEEHPLKKFGSQGQQKSFLIALKLGQYSYLFEKKGFKPLLLLDDIFDKLDGLRIKRLMEMVVKDNFGQLFLTDTDPERLEKLFGEIGVPAKIFRIDGGTIR
>NZ_CP042432.1|WP_132130437.1|4296844_4297507_+|tetratricopeptide-repeat-protein
MMLNDKYGRAESFVNENKKSLLIIAGSVVILVLLYIGYTKFYLAPREQEAVNDMFKAQEFFRSDSLDKALNGDGNYKGFLTIIEEYDGTRSANLANYYTGVIYLQQGKFQEAIEYLEHYSAKDEITRVEAIGLLGDAYSELKQYDKAISKYREAATTNPNSFTSPLYLMKLALVYEATNNVPEAVKTYKTIKTEYWQFAQTQNIDAYIAKLEQKAPSGNE
>NZ_CP042432.1|WP_132130357.1|4297553_4298045_+|6,7-dimethyl-8-ribityllumazine-synthase
MSSIYKNLSDFSDTTIPPAKGFRFGIVVAEWNKEITESLYEGAFQTLLGHGAEKEAITRINVPGSFELTAGAAMLAEKGNYDAVICLGCVIQGETRHFDFICQAVAAGLTELSVKYSKSFVFGVLTPNTMQQALDRAGGKHGNKGDEAAVTAIKMAALARRLS
>NZ_CP042432.1|WP_132130356.1|4298240_4299125_+|lipoyl-synthase
MIELPVIPAEPRKRKPDWLRVKLPTGKEYAHVRSLVDNYKLHTICESGNCPNMGECWGAGTATFMILGNICTRSCSFCAVATGRPLAVDYDEPERVASSVQLMGVKHCVITSVDRDDLKDGGSIIWAETIRAVRRKSPETTLETLIPDFKGIWANLEHVLEEAPEVVSHNVETVQRLTREVRIQAKYERSLECLRRISQAGMRTKTGIMLGLGETEAEVLEAMDHLLEAGVHILTLGQYLQPTQKHHPVIEYIHPDQFAKYKEAGLGKGFRYVESGPMVRSSYHAERHLFDMQP
>NZ_CP042432.1|WP_132130355.1|4299233_4299746_+|DUF937-domain-containing-protein
MLEKLLEQAKGQLIPSLIDDPEVDNAHAEQIAEVSGDTVINSLLGQARSGDYSGLQELLSGNDTDASSPAVNNLVPQVAENLISRLGLSPEMAQNIAGKVIPMIMNMLNGKVQDAQSRGIDIGGLLGGLMSGNGQGGGLLGKLGGMFGGGRKGGSGDNQPDISSLLGKFF
>NZ_CP042432.1|WP_132130354.1|4299854_4300601_-|segregation/condensation-protein-A
MSFEIKLAQFEGPFDLLLFFIERDELDIHDIPIAGITRDFLDYIHRMQTLNIELASEFILVAATLMRIKAKMLLPRPELDEEGNEIDPRQDLVQMLLEYKKYKSVLPYFQQLEEERLQQERRGNIAKELSVIGKQTAPGEELSTLDLYKLLKVYERVLKRYQNESAEVVHTVTQYPYNIQDQKEIILNTLTAAGKMNFEDILLLSRDKVQLVYNFLALLEMIQQQLVLISLGLGYNNFRLSLNKNGPE
>NZ_CP042432.1|WP_132130353.1|4300694_4302641_+|1-deoxy-D-xylulose-5-phosphate-synthase
MSSQKVDAGKLLQQIDSPEDLKKLNETDLPELCKELRQFIIDIVSVNGGHFAASLGVVELTVALHYVFNTPYDQLVWDVGHQAYGHKILTGRRDTFYTNRMYKGISGFPKRDESPYDTFGVGHSSTSISAALGMAVASHYKNEEQRQHIAVIGDGALTAGLSFEALNHAGVEDSNLLVILNDNCMSIDPNVGALKEYLTDIATSKTYNQLKKDIWRLLGPISKFGPNAREIVKKVEKSIKGTLLRKSNFFEALKFRYFGPIDGHDVKHLVKVLSDLQHIPGPKLLHCITVKGKGYPLAERDQTKWHAPGLFDKITGEIKKSAAPKAQAPKYQDVFGHTLVELAQQNPKIMGITPAMPSGSSMNIMMNAFPDRAFDVGIAEQHAVTFSAGLATRGLVPFCNIYSTFMQRAYDQVIHDVAVQNLKVVFCLDRAGIAGADGATHHGAYDLAYMRCIPNMIVAAPMNEEELRNLMYTAQLDQVKGPFVIRYPRGKGVMADWQKPLKEIAVGKGRKISDGDEVAILSIGHVGNFAGEAIGLLEQEGIRPAHYDMRFVKPLDETLLHEVFKEFKKVVTVEDGCIMGGMGSAILEFMADHNYQAQVVRLGIPDKVVEHGEQAELYEECHYDAAGIAKTAKALFSGSSASNRLIAS
>NZ_CP042432.1|WP_147698397.1|4302828_4303449_-|hypothetical-protein
MNIKVEPFDKAAIYGQLSLDEFKFKEVFGGDGWWANKYGIQLGFKTFDLFRVKDLNWLLEFNTVRPYTYSQRDPLINYAHYNQPLGHPQGANFRELLSIASFSMDRWRFRGQLVYSQYGLDPADSLNYGKDIYKSYETRVSDYGNHTVQGEKTNLYYGNLQVAYLLNPKNNLRLQTGLTVRRESGQNQTWFSFGLSSSFRNLYYDF
>NZ_CP042432.1|WP_147698398.1|4303454_4304420_-|hypothetical-protein
MRLFYFLASWLVLATFSLSAFSQLLPLSHELESAHGRTIYSLGNKFHSSVHSYFQDEIDTLGGSRADSLSPLFNNRETFLYRKLFTEHLIQIDKPDYSLYLDFLPDFQIGREFSGDKTTWLNTRGLSLQGRIGEEVYFYTDFYENQAALPGYLDEFAREASILPGQGKHKPYNGGKAFDWAYAQGFVSYSPSSHFNFQLGNSKQFIGDGYRSMLLSDVGFNYPSLKVTTSLGPLRYMIMWAQFQDLQAPEVAFEQGHRKKWGVIHYLDWNISNRVSLGLFESIMWQNADSTGKRGFDVKYLNPIIFFRPVEYSGGIPLIMR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP042432_13	13.7\|2635027\|29\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635027-2635055	29	NZ_CP042432.1	1861614-1861642	1.0
NZ_CP042432_18	18.2\|2870694\|45\|NZ_CP042432\|CRT	2870694-2870738	45	NZ_CP042432.1	2870950-2870994	1.0
NZ_CP042432_18	18.4\|2870839\|49\|NZ_CP042432\|CRT	2870839-2870887	49	NZ_CP042432.1	2870950-2870998	1.0

1. spacer 13.7|2635027|29|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to position: 1861614-1861642, mismatch: 0, identity: 1.0

tcctcggtcaaggtagcccagctcaaagg	CRISPR spacer
tcctcggtcaaggtagcccagctcaaagg	Protospacer
*****************************

2. spacer 18.2|2870694|45|NZ_CP042432|CRT matches to position: 2870950-2870994, mismatch: 0, identity: 1.0

tttgcatgcgggggtgcgtttcgcatggtcgctttgctccatgcg	CRISPR spacer
tttgcatgcgggggtgcgtttcgcatggtcgctttgctccatgcg	Protospacer
*********************************************

3. spacer 18.4|2870839|49|NZ_CP042432|CRT matches to position: 2870950-2870998, mismatch: 0, identity: 1.0

tttgcatgcgggggtgcgtttcgcatggtcgctttgctccatgcgagcg	CRISPR spacer
tttgcatgcgggggtgcgtttcgcatggtcgctttgctccatgcgagcg	Protospacer
*************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	910189-910215	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	809717-809743	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	789953-789979	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	230690-230716	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1041796-1041822	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP016287	Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence	953253-953279	5	0.815
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP030761	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence	875999-876025	5	0.815
NZ_CP042432_14	14.14\|2641764\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641764-2641793	30	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	3595-3624	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	KM597530	Mycobacterium phage Bipolar, complete genome	44302-44331	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	MH051257	Mycobacterium phage OwlsT2W, complete genome	45690-45719	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	MT897904	Mycobacterium phage Royals2015, complete genome	45710-45739	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	KM101122	Mycobacterium phage Hades, complete genome	43945-43974	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	MK112556	Mycobacterium phage Zerg, complete genome	45561-45590	5	0.833
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	KT281795	Mycobacterium phage XFactor, complete genome	44717-44746	5	0.833
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP025013	Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence	638061-638087	6	0.778
NZ_CP042432_13	13.31\|2636850\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636850-2636879	30	MK388689	Pantoea phage vB_PagM_LIET2, complete genome	65214-65243	6	0.8
NZ_CP042432_13	13.36\|2637230\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637230-2637259	30	MK388689	Pantoea phage vB_PagM_LIET2, complete genome	65214-65243	6	0.8
NZ_CP042432_13	13.42\|2637686\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637686-2637715	30	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	1097021-1097050	6	0.8
NZ_CP042432_13	13.43\|2637762\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637762-2637791	30	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	157350-157379	6	0.8
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	JN699012	Mycobacterium phage SG4, complete genome	42600-42629	6	0.8
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	MN694777	Marine virus AFVG_250M80, complete genome	2275-2304	6	0.8
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	KX619650	Mycobacterium phage Jerm, complete genome	3756-3785	6	0.8
NZ_CP042432_15	15.20\|2645252\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645252-2645281	30	NZ_CP023822	Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence	7915-7944	6	0.8
NZ_CP042432_15	15.21\|2645328\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645328-2645357	30	NZ_CP023822	Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence	7915-7944	6	0.8
NZ_CP042432_6	6.1\|1805833\|27\|NZ_CP042432\|CRISPRCasFinder	1805833-1805859	27	NZ_CP011808	Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence	336897-336923	7	0.741
NZ_CP042432_13	13.3\|2634723\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2634723-2634752	30	NZ_CP051683	Mucilaginibacter sp. F39-2 plasmid unnamed1, complete sequence	22953-22982	7	0.767
NZ_CP042432_13	13.7\|2635027\|29\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635027-2635055	29	AY258466	Podovirus GOM clone GOM-W-I DNA polymerase gene, partial cds	220-248	7	0.759
NZ_CP042432_13	13.9\|2635178\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635178-2635207	30	MF285619	Serratia phage 2050H1, complete genome	99839-99868	7	0.767
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	MN122072	Escherichia phage vB_EcoM_Bp10, complete genome	47610-47639	7	0.767
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	MH576962	Streptomyces phage Satis, complete genome	87326-87355	7	0.767
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	MK620894	Streptomyces phage Kradal, complete genome	87330-87359	7	0.767
NZ_CP042432_13	13.12\|2635406\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635406-2635435	30	NC_015724	Cupriavidus necator N-1 plasmid pBB2, complete sequence	158326-158355	7	0.767
NZ_CP042432_13	13.13\|2635482\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635482-2635511	30	MT114163	Mycobacterium phage Settecandela, complete genome	104416-104445	7	0.767
NZ_CP042432_13	13.13\|2635482\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635482-2635511	30	MK937592	Mycobacterium phage Phrappuccino, complete genome	104416-104445	7	0.767
NZ_CP042432_13	13.20\|2636014\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636014-2636043	30	MK448859	Streptococcus phage Javan170, complete genome	9036-9065	7	0.767
NZ_CP042432_13	13.20\|2636014\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636014-2636043	30	MK448686	Streptococcus phage Javan157, complete genome	8610-8639	7	0.767
NZ_CP042432_13	13.20\|2636014\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636014-2636043	30	MK448951	Streptococcus phage Javan470, complete genome	8610-8639	7	0.767
NZ_CP042432_13	13.20\|2636014\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636014-2636043	30	MK448688	Streptococcus phage Javan161, complete genome	9035-9064	7	0.767
NZ_CP042432_13	13.22\|2636166\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636166-2636195	30	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	108500-108529	7	0.767
NZ_CP042432_13	13.22\|2636166\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636166-2636195	30	MW149091	Microvirus sp. isolate gila13, complete genome	1458-1487	7	0.767
NZ_CP042432_13	13.22\|2636166\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636166-2636195	30	NC_012521	Rhodococcus opacus B4 plasmid pROB02, complete sequence	181809-181838	7	0.767
NZ_CP042432_13	13.22\|2636166\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636166-2636195	30	NZ_CP046574	Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence	144398-144427	7	0.767
NZ_CP042432_13	13.22\|2636166\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636166-2636195	30	NC_005073	Rhodococcus erythropolis linear plasmid pBD2, complete sequence	163215-163244	7	0.767
NZ_CP042432_13	13.25\|2636394\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636394-2636423	30	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	292740-292769	7	0.767
NZ_CP042432_13	13.25\|2636394\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636394-2636423	30	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	672902-672931	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	NZ_CP049040	Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_3, complete sequence	28925-28954	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	NC_009957	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI03, complete sequence	58428-58457	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	MH338234	Mycobacterium phage Crucio, complete genome	51294-51323	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	KM463009	Mycobacterium phage Power, complete genome	51437-51466	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	MT498066	Mycobacterium phage Georgie2, complete genome	51438-51467	7	0.767
NZ_CP042432_13	13.27\|2636546\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636546-2636575	30	MF919531	Mycobacterium phage SnapTap, complete genome	51093-51122	7	0.767
NZ_CP042432_13	13.29\|2636698\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636698-2636727	30	NC_023735	Rhodococcus phage ReqiPepy6, complete genome	15446-15475	7	0.767
NZ_CP042432_13	13.34\|2637078\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637078-2637107	30	NC_023735	Rhodococcus phage ReqiPepy6, complete genome	15446-15475	7	0.767
NZ_CP042432_13	13.41\|2637610\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637610-2637639	30	KX365748	Pseudoalteromonas phage BS5, complete genome	36751-36780	7	0.767
NZ_CP042432_14	14.14\|2641764\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641764-2641793	30	MN512538	Vibrio phage Seahorse, complete genome	33163-33192	7	0.767
NZ_CP042432_14	14.14\|2641764\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641764-2641793	30	MN693705	Marine virus AFVG_250M220, complete genome	7816-7845	7	0.767
NZ_CP042432_14	14.18\|2641992\|30\|NZ_CP042432\|CRISPRCasFinder	2641992-2642021	30	NC_047925	Lactobacillus phage Nyseid, complete genome	8518-8547	7	0.767
NZ_CP042432_14	14.18\|2641992\|30\|NZ_CP042432\|CRISPRCasFinder	2641992-2642021	30	NC_047897	Lactobacillus phage Lenus, complete genome	7862-7891	7	0.767
NZ_CP042432_15	15.3\|2643962\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2643962-2643991	30	NZ_KT020860	Yersinia pestis strain I-2638 plasmid pTP33, complete sequence	13886-13915	7	0.767
NZ_CP042432_15	15.3\|2643962\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2643962-2643991	30	NZ_CP045261	Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pTP33, complete sequence	20209-20238	7	0.767
NZ_CP042432_15	15.3\|2643962\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2643962-2643991	30	NZ_CP045152	Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pTP33, complete sequence	3190-3219	7	0.767
NZ_CP042432_15	15.3\|2643962\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2643962-2643991	30	CP013974	Erwinia phage LS-2018a, complete sequence	32022-32051	7	0.767
NZ_CP042432_15	15.5\|2644114\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644114-2644143	30	NZ_CP043831	Bacillus sp. BS98 plasmid unnamed1	154007-154036	7	0.767
NZ_CP042432_15	15.5\|2644114\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644114-2644143	30	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	208469-208498	7	0.767
NZ_CP042432_20	20.1\|3529293\|33\|NZ_CP042432\|CRISPRCasFinder	3529293-3529325	33	NZ_CP014644	Lysinibacillus sphaericus strain OT4b.25 plasmid unnamed, complete sequence	32452-32484	7	0.788
NZ_CP042432_20	20.1\|3529293\|33\|NZ_CP042432\|CRISPRCasFinder	3529293-3529325	33	NZ_CP014857	Lysinibacillus sphaericus III(3)7 plasmid, complete sequence	66791-66823	7	0.788
NZ_CP042432_22	22.1\|3813483\|30\|NZ_CP042432\|CRISPRCasFinder	3813483-3813512	30	NZ_CP043614	Lactobacillus buchneri strain MGB0786 plasmid unnamed3, complete sequence	2453-2482	7	0.767
NZ_CP042432_13	13.3\|2634723\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2634723-2634752	30	NC_017076	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC2, complete sequence	85243-85272	8	0.733
NZ_CP042432_13	13.13\|2635482\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635482-2635511	30	NZ_CP053345	Herbiconiux sp. SALV-R1 plasmid unnamed1, complete sequence	87296-87325	8	0.733
NZ_CP042432_13	13.13\|2635482\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635482-2635511	30	NC_014213	Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence	154547-154576	8	0.733
NZ_CP042432_13	13.16\|2635710\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635710-2635739	30	MH319754	Marine virus AG-345-L05 Ga0172272_11 genomic sequence	21467-21496	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MT764206	Escherichia phage JEP6, complete genome	52240-52269	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	NC_019399	Enterobacteria phage vB_EcoM_ACG-C40, complete genome	145915-145944	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606997	Enterobacteria phage RB7, complete genome	147673-147702	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MH751506	Escherichia phage T2, complete genome	142155-142184	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MF001354	Salmonella phage SG1, partial genome	92687-92716	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	AP018813	Enterobacteria phage T2 DNA, complete genome	142148-142177	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	NC_030953	Shigella phage SHFML-11, complete genome	95505-95534	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606996	Enterobacteria phage RB6, complete genome	147672-147701	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MN022785	Escherichia virus VEc20, complete genome	146280-146309	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	AY310907	Enterobacteria phage T2 Gp59 gene, partial cds; Gp32, Frd.3, Frd.2, Frd.1, dihydrofolate reductase, dTMP thymidylate synthase, and NrdA.2 genes, complete cds; and NrdA.1 gene, partial cds	437-466	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606995	Enterobacteria phage RB5, complete genome	147672-147701	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KR269718	Escherichia phage HY03, complete genome	145587-145616	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606994	Enterobacteria phage RB3, complete genome	147680-147709	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KX130862	Shigella phage SHFML-26, complete genome	45573-45602	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KT184311	Enterobacteria phage GiZh, complete genome	28912-28941	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	LR215724	Yersinia phage fPS-65 genome assembly, chromosome: I	146460-146489	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	LC348380	Escherichia phage T2 DNA, complete sequence	142158-142187	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MK327942	Escherichia phage vB_EcoM_G50, complete genome	146087-146116	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606999	Enterobacteria phage RB10, complete genome	147679-147708	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	KM606998	Enterobacteria phage RB9, complete genome	147673-147702	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	NZ_CP030100	Roseovarius sp. AK1035 plasmid unnamed, complete sequence	92591-92620	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	NZ_CP020475	Roseovarius mucosus strain SMR3 plasmid pSMR3-1, complete sequence	4072-4101	8	0.733
NZ_CP042432_13	13.21\|2636090\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636090-2636119	30	MK496693	Capybara microvirus Cap1_SP_77, complete genome	5102-5131	8	0.733
NZ_CP042432_13	13.26\|2636470\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636470-2636499	30	NZ_CP023152	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence	230842-230871	8	0.733
NZ_CP042432_13	13.29\|2636698\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636698-2636727	30	MH616712	Microviridae sp. isolate ctci661, complete genome	823-852	8	0.733
NZ_CP042432_13	13.34\|2637078\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2637078-2637107	30	MH616712	Microviridae sp. isolate ctci661, complete genome	823-852	8	0.733
NZ_CP042432_13	13.46\|2637990\|30\|NZ_CP042432\|CRISPRCasFinder	2637990-2638019	30	MN693028	Marine virus AFVG_117M90, complete genome	10059-10088	8	0.733
NZ_CP042432_14	14.12\|2641612\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641612-2641641	30	NZ_CP018230	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence	119731-119760	8	0.733
NZ_CP042432_14	14.12\|2641612\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641612-2641641	30	NZ_CP022566	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence	524167-524196	8	0.733
NZ_CP042432_14	14.12\|2641612\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641612-2641641	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2617657-2617686	8	0.733
NZ_CP042432_14	14.14\|2641764\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641764-2641793	30	MN693465	Marine virus AFVG_25M405, complete genome	5312-5341	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	1025730-1025759	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	1573348-1573377	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	728871-728900	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP046102	Rhodococcus sp. AQ5-07 plasmid unnamed3, complete sequence	68778-68807	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	655565-655594	8	0.733
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	711423-711452	8	0.733
NZ_CP042432_15	15.12\|2644644\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644644-2644673	30	NC_030920	Bacillus phage Eldridge, complete genome	114800-114829	8	0.733
NZ_CP042432_15	15.13\|2644720\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644720-2644749	30	NC_030920	Bacillus phage Eldridge, complete genome	114800-114829	8	0.733
NZ_CP042432_15	15.17\|2645024\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645024-2645053	30	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1250338-1250367	8	0.733
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	NZ_CP022220	Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence	729309-729338	8	0.733
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	NZ_CP030052	Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence	342148-342177	8	0.733
NZ_CP042432_15	15.18\|2645100\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645100-2645129	30	NZ_CP030054	Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence	521741-521770	8	0.733
NZ_CP042432_22	22.1\|3813483\|30\|NZ_CP042432\|CRISPRCasFinder	3813483-3813512	30	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	254928-254957	8	0.733
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	MN693047	Marine virus AFVG_25M111, complete genome	37947-37976	9	0.7
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	MN693506	Marine virus AFVG_25M112, complete genome	37708-37737	9	0.7
NZ_CP042432_13	13.26\|2636470\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2636470-2636499	30	NZ_CP029234	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence	178339-178368	9	0.7
NZ_CP042432_14	14.4\|2641003\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641003-2641032	30	MN693674	Marine virus AFVG_250M120, complete genome	8878-8907	9	0.7
NZ_CP042432_14	14.6\|2641155\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641155-2641184	30	MN856091	Myoviridae sp. isolate 9, partial genome	15696-15725	9	0.7
NZ_CP042432_14	14.12\|2641612\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2641612-2641641	30	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	34827-34856	9	0.7
NZ_CP042432_14	14.19\|2642068\|30\|NZ_CP042432\|CRISPRCasFinder,PILER-CR	2642068-2642097	30	NC_022358	Sulfuricella denitrificans skB26 plasmid pSCD, complete sequence	35935-35964	9	0.7
NZ_CP042432_15	15.5\|2644114\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644114-2644143	30	NC_019681	Synechococcus sp. PCC 6312 plasmid pSYN6312.01, complete sequence	20042-20071	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	431014-431043	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	588775-588804	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	1084743-1084772	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	607333-607362	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	528698-528727	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	41898-41927	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	485187-485216	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	988377-988406	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	173692-173721	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	996058-996087	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1020373-1020402	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	1061693-1061722	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	1198802-1198831	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	1298772-1298801	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	1285315-1285344	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	854324-854353	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	817074-817103	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	994397-994426	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	MN694575	Marine virus AFVG_250M956, complete genome	14515-14544	9	0.7
NZ_CP042432_15	15.11\|2644568\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2644568-2644597	30	MN694768	Marine virus AFVG_250M955, complete genome	14302-14331	9	0.7
NZ_CP042432_15	15.17\|2645024\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645024-2645053	30	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	13012-13041	9	0.7
NZ_CP042432_15	15.17\|2645024\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645024-2645053	30	NZ_CP045310	Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence	22467-22496	9	0.7
NZ_CP042432_15	15.20\|2645252\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645252-2645281	30	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1551327-1551356	9	0.7
NZ_CP042432_15	15.21\|2645328\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2645328-2645357	30	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1551327-1551356	9	0.7
NZ_CP042432_13	13.11\|2635330\|30\|NZ_CP042432\|PILER-CR,CRISPRCasFinder	2635330-2635359	30	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	61693-61722	10	0.667

1. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

2. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

3. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

4. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

5. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

6. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP016287 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

7. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP030761 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccag	Protospacer
..****** ******.*********.*

8. spacer 14.14|2641764|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 5, identity: 0.833

attgata-attatcttaaagagtatgagtaa	CRISPR spacer
-ttactagattatcttaaagagtataagaaa	Protospacer
 **. ** *****************.** **

9. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM597530 (Mycobacterium phage Bipolar, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcgacctgggggacgacagcgtttccg	Protospacer
   .********************** ***

10. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH051257 (Mycobacterium phage OwlsT2W, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcgacctgggggacgacagcgtttccg	Protospacer
   .********************** ***

11. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT897904 (Mycobacterium phage Royals2015, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcgacctgggggacgacagcgtttccg	Protospacer
   .********************** ***

12. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM101122 (Mycobacterium phage Hades, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcgacctgggggacgacagcgtttccg	Protospacer
   .********************** ***

13. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK112556 (Mycobacterium phage Zerg, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcgacctgggggacgacagcgtttccg	Protospacer
   .********************** ***

14. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KT281795 (Mycobacterium phage XFactor, complete genome) position: , mismatch: 5, identity: 0.833

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
ctctcgacctgggggacgacagcgtttccg	Protospacer
    ********************** ***

15. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.778

atccaggtttccccgtgccgcatccgg	CRISPR spacer
gcccaggtatccccgcgccgcatccaa	Protospacer
..****** ******.*********..

16. spacer 13.31|2636850|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK388689 (Pantoea phage vB_PagM_LIET2, complete genome) position: , mismatch: 6, identity: 0.8

aattgagaacaacgaaaacgtgcagaaatg	CRISPR spacer
cattgagaacaaagaaaacgtggaagactg	Protospacer
 *********** ********* *..* **

17. spacer 13.36|2637230|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK388689 (Pantoea phage vB_PagM_LIET2, complete genome) position: , mismatch: 6, identity: 0.8

aattgagaacaacgaaaacgtgcagaaatg	CRISPR spacer
cattgagaacaaagaaaacgtggaagactg	Protospacer
 *********** ********* *..* **

18. spacer 13.42|2637686|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 6, identity: 0.8

gcagcacttgcggaaattctccgtcatcat----	CRISPR spacer
gcagcacttgcagaaattctcc----ccatgtct	Protospacer
***********.**********    .***

19. spacer 13.43|2637762|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 6, identity: 0.8

tggggattcaatcgtttttaaaatgtttgc	CRISPR spacer
tccagattctatcgtttataaaatgtttgt	Protospacer
*  .***** ******* ***********.

20. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to JN699012 (Mycobacterium phage SG4, complete genome) position: , mismatch: 6, identity: 0.8

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tctgcaacctgggggacaacagcgttgccg	Protospacer
   .*.***********.************

21. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN694777 (Marine virus AFVG_250M80, complete genome) position: , mismatch: 6, identity: 0.8

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
tccgcgacctgggggacgaccgcgtttccg	Protospacer
   .**************** ***** ***

22. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KX619650 (Mycobacterium phage Jerm, complete genome) position: , mismatch: 6, identity: 0.8

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
agcgagaccgggtggacgacagcgttgccc	Protospacer
** . **** ** ****************

23. spacer 15.20|2645252|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP023822 (Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence) position: , mismatch: 6, identity: 0.8

cctacgcaggaaggcattgcgtatataaat	CRISPR spacer
cttcaacagaaaggcattgagtatataaat	Protospacer
*.*  .***.********* **********

24. spacer 15.21|2645328|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP023822 (Escherichia coli strain 7/2 plasmid p7_2.2, complete sequence) position: , mismatch: 6, identity: 0.8

cctacgcaggaaggcattgcgtatataaat	CRISPR spacer
cttcaacagaaaggcattgagtatataaat	Protospacer
*.*  .***.********* **********

25. spacer 6.1|1805833|27|NZ_CP042432|CRISPRCasFinder matches to NZ_CP011808 (Pandoraea faecigallinarum strain DSM 23572 plasmid pPF72-1, complete sequence) position: , mismatch: 7, identity: 0.741

atccaggtttccccgtgccgcatccgg	CRISPR spacer
ggacaggtttccccgtgccgcaccgct	Protospacer
.  *******************.*

26. spacer 13.3|2634723|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP051683 (Mucilaginibacter sp. F39-2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agataccgacctatgggaaaaagagtggtt-----	CRISPR spacer
agatatcgacttatgggaaaaa-----gttgcaag	Protospacer
*****.****.***********     ***

27. spacer 13.7|2635027|29|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to AY258466 (Podovirus GOM clone GOM-W-I DNA polymerase gene, partial cds) position: , mismatch: 7, identity: 0.759

tcctcggtcaaggtagcccagctcaaagg	CRISPR spacer
gtctcggtcaaggtagctcagctctttga	Protospacer
 .***************.******   *.

28. spacer 13.9|2635178|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MF285619 (Serratia phage 2050H1, complete genome) position: , mismatch: 7, identity: 0.767

caaaatatgaaaaccgtaaccggcagtacg	CRISPR spacer
ggaaatatgacaaccgtaaccgtcagggca	Protospacer
 .******** *********** *** .*.

29. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN122072 (Escherichia phage vB_EcoM_Bp10, complete genome) position: , mismatch: 7, identity: 0.767

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
tttgtttgcagaagaagtcaataaaattat	Protospacer
*.. ****************  *****..*

30. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH576962 (Streptomyces phage Satis, complete genome) position: , mismatch: 7, identity: 0.767

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
tccttttgcagaagaagtaaccgctacctt	Protospacer
****************** ** .  *.* *

31. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK620894 (Streptomyces phage Kradal, complete genome) position: , mismatch: 7, identity: 0.767

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
tccttttgcagaagaagtaaccgctacctt	Protospacer
****************** ** .  *.* *

32. spacer 13.12|2635406|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_015724 (Cupriavidus necator N-1 plasmid pBB2, complete sequence) position: , mismatch: 7, identity: 0.767

cgcccaagaggcgaagattgtaaaagagta	CRISPR spacer
cgcccaagaggcgatggttgtaaaccatag	Protospacer
************** *.*******  *  .

33. spacer 13.13|2635482|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT114163 (Mycobacterium phage Settecandela, complete genome) position: , mismatch: 7, identity: 0.767

cggatcaaatccgaagacccggacgaggaa	CRISPR spacer
gcgcccgaacccgaagaccccgacgaggaa	Protospacer
  * .*.**.********** *********

34. spacer 13.13|2635482|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK937592 (Mycobacterium phage Phrappuccino, complete genome) position: , mismatch: 7, identity: 0.767

cggatcaaatccgaagacccggacgaggaa	CRISPR spacer
gcgcccgaacccgaagaccccgacgaggaa	Protospacer
  * .*.**.********** *********

35. spacer 13.20|2636014|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 7, identity: 0.767

aagtataacgcagttccgatctcactaggt	CRISPR spacer
ggatctaaggcagttccgatgtcactagct	Protospacer
...* *** *********** ******* *

36. spacer 13.20|2636014|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 7, identity: 0.767

aagtataacgcagttccgatctcactaggt	CRISPR spacer
ggatctaaggcagttccgatgtcactagct	Protospacer
...* *** *********** ******* *

37. spacer 13.20|2636014|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 7, identity: 0.767

aagtataacgcagttccgatctcactaggt	CRISPR spacer
ggatctaaggcagttccgatgtcactagct	Protospacer
...* *** *********** ******* *

38. spacer 13.20|2636014|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 7, identity: 0.767

aagtataacgcagttccgatctcactaggt	CRISPR spacer
ggatctaaggcagttccgatgtcactagct	Protospacer
...* *** *********** ******* *

39. spacer 13.22|2636166|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 7, identity: 0.767

ttcgcagcctgcgttgaatgctgactttat	CRISPR spacer
tcagcagcttgcgttgaatgctggctcggt	Protospacer
*. *****.**************.**. .*

40. spacer 13.22|2636166|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MW149091 (Microvirus sp. isolate gila13, complete genome) position: , mismatch: 7, identity: 0.767

ttcgcagcctgcgttgaatgctgactttat	CRISPR spacer
agagaaacctgctttgaatgctgattttat	Protospacer
   * *.***** ***********.*****

41. spacer 13.22|2636166|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_012521 (Rhodococcus opacus B4 plasmid pROB02, complete sequence) position: , mismatch: 7, identity: 0.767

ttcgcagcctgcgttgaatgctgactttat	CRISPR spacer
tcagcagcttgcgttgaatgctggctcggt	Protospacer
*. *****.**************.**. .*

42. spacer 13.22|2636166|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 7, identity: 0.767

ttcgcagcctgcgttgaatgctgactttat	CRISPR spacer
tcagcagcttgcgttgaatgctggctcggt	Protospacer
*. *****.**************.**. .*

43. spacer 13.22|2636166|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_005073 (Rhodococcus erythropolis linear plasmid pBD2, complete sequence) position: , mismatch: 7, identity: 0.767

ttcgcagcctgcgttgaatgctgactttat	CRISPR spacer
tcagcagcttgcgttgaatgctggctcggt	Protospacer
*. *****.**************.**. .*

44. spacer 13.25|2636394|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 7, identity: 0.767

agtttttga----ttaaaggcccatcattgtttc	CRISPR spacer
----tctcacactttaaagacccatcattgtttc	Protospacer
    *.* *    ******.**************

45. spacer 13.25|2636394|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 7, identity: 0.767

agtttttga----ttaaaggcccatcattgtttc	CRISPR spacer
----tctcacactttaaagacccatcattgtttc	Protospacer
    *.* *    ******.**************

46. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP049040 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_3, complete sequence) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ccggggtctgcccgaaggcgtcggggagcg	Protospacer
**************** **** . *.* *

47. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_009957 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI03, complete sequence) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ccggggtctgcccgaaggcgtcggggagcg	Protospacer
**************** **** . *.* *

48. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH338234 (Mycobacterium phage Crucio, complete genome) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ctccggtcagcccgaacgcgtcacgaacgt	Protospacer
*.  **** ************ *****. *

49. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM463009 (Mycobacterium phage Power, complete genome) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ctccggtcagcccgaacgcgtcacgaacgt	Protospacer
*.  **** ************ *****. *

50. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT498066 (Mycobacterium phage Georgie2, complete genome) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ctccggtcagcccgaacgcgtcacgaacgt	Protospacer
*.  **** ************ *****. *

51. spacer 13.27|2636546|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MF919531 (Mycobacterium phage SnapTap, complete genome) position: , mismatch: 7, identity: 0.767

ccggggtctgcccgaacgcgtgacgaatct	CRISPR spacer
ctccggtcagcccgaacgcgtcacgaacgt	Protospacer
*.  **** ************ *****. *

52. spacer 13.29|2636698|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_023735 (Rhodococcus phage ReqiPepy6, complete genome) position: , mismatch: 7, identity: 0.767

ggaagaagcagccgaaatatacgcaagcga	CRISPR spacer
tgaagaagcagcagaagtatacgcaggatt	Protospacer
 *********** ***.********.*

53. spacer 13.34|2637078|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_023735 (Rhodococcus phage ReqiPepy6, complete genome) position: , mismatch: 7, identity: 0.767

ggaagaagcagccgaaatatacgcaagcga	CRISPR spacer
tgaagaagcagcagaagtatacgcaggatt	Protospacer
 *********** ***.********.*

54. spacer 13.41|2637610|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KX365748 (Pseudoalteromonas phage BS5, complete genome) position: , mismatch: 7, identity: 0.767

cgagtatggcttcagctgtttttggtgttt	CRISPR spacer
cgttaatggcctcagctgttgttggtgtgc	Protospacer
**   *****.********* ******* .

55. spacer 14.14|2641764|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN512538 (Vibrio phage Seahorse, complete genome) position: , mismatch: 7, identity: 0.767

attgataattatcttaaagagtatgagtaa	CRISPR spacer
cttgataattatcttaaatggtattatcat	Protospacer
 ***************** .**** * .*

56. spacer 14.14|2641764|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN693705 (Marine virus AFVG_250M220, complete genome) position: , mismatch: 7, identity: 0.767

attgataattatcttaaagagtatgagtaa	CRISPR spacer
actcctaattattttatagagtatgagtgt	Protospacer
*.*  *******.*** ***********.

57. spacer 14.18|2641992|30|NZ_CP042432|CRISPRCasFinder matches to NC_047925 (Lactobacillus phage Nyseid, complete genome) position: , mismatch: 7, identity: 0.767

aggatgtaccatatatacagatttccttgc	CRISPR spacer
tggatctgccatatatacagatttgccgtc	Protospacer
 **** *.**************** *.  *

58. spacer 14.18|2641992|30|NZ_CP042432|CRISPRCasFinder matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 7, identity: 0.767

aggatgtaccatatatacagatttccttgc	CRISPR spacer
tggatctgccatatatacagatttgccgtc	Protospacer
 **** *.**************** *.  *

59. spacer 15.3|2643962|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_KT020860 (Yersinia pestis strain I-2638 plasmid pTP33, complete sequence) position: , mismatch: 7, identity: 0.767

actccccaacgggcgcagacacttcaatat	CRISPR spacer
tcccccaaacgggcgcagagacttcaaggg	Protospacer
 *.*** ************ ******* .

60. spacer 15.3|2643962|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP045261 (Yersinia pestis strain SCPM-O-B-5942 (I-2638) plasmid pTP33, complete sequence) position: , mismatch: 7, identity: 0.767

actccccaacgggcgcagacacttcaatat	CRISPR spacer
tcccccaaacgggcgcagagacttcaaggg	Protospacer
 *.*** ************ ******* .

61. spacer 15.3|2643962|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP045152 (Yersinia pestis strain SCPM-O-DNA-18 (I-3113) plasmid pTP33, complete sequence) position: , mismatch: 7, identity: 0.767

actccccaacgggcgcagacacttcaatat	CRISPR spacer
tcccccaaacgggcgcagagacttcaaggg	Protospacer
 *.*** ************ ******* .

62. spacer 15.3|2643962|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to CP013974 (Erwinia phage LS-2018a, complete sequence) position: , mismatch: 7, identity: 0.767

actccccaacgggcgcagacacttcaatat	CRISPR spacer
tcccccaaacgggcgcagagacttcaaggg	Protospacer
 *.*** ************ ******* .

63. spacer 15.5|2644114|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP043831 (Bacillus sp. BS98 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

tagatttttaaatgaagtcgctatctgatc	CRISPR spacer
agtatttttaaatgaagtcgccatgtgcac	Protospacer
 . ******************.** **  *

64. spacer 15.5|2644114|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 7, identity: 0.767

tagatttttaaatgaagtcgctatctgatc	CRISPR spacer
agtatttttaaatgaagtcgccatgtgcac	Protospacer
 . ******************.** **  *

65. spacer 20.1|3529293|33|NZ_CP042432|CRISPRCasFinder matches to NZ_CP014644 (Lysinibacillus sphaericus strain OT4b.25 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

aaaaactttaaactttaaactttaaactttaag	CRISPR spacer
taatactttaaactttaaactttaaatgtgata	Protospacer
 ** **********************. * * .

66. spacer 20.1|3529293|33|NZ_CP042432|CRISPRCasFinder matches to NZ_CP014857 (Lysinibacillus sphaericus III(3)7 plasmid, complete sequence) position: , mismatch: 7, identity: 0.788

aaaaactttaaactttaaactttaaactttaag	CRISPR spacer
taatactttaaactttaaactttaaatgtgata	Protospacer
 ** **********************. * * .

67. spacer 22.1|3813483|30|NZ_CP042432|CRISPRCasFinder matches to NZ_CP043614 (Lactobacillus buchneri strain MGB0786 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

cagaacccaaaaaccctaaaaactacaaac	CRISPR spacer
tagaacctaaaaaccctgaaaactatttgc	Protospacer
.******.*********.*******.  .*

68. spacer 13.3|2634723|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_017076 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC2, complete sequence) position: , mismatch: 8, identity: 0.733

agataccgacctatgggaaaaagagtggtt	CRISPR spacer
actgcatgacctgtgggaaaaatagtggtt	Protospacer
*     .*****.********* *******

69. spacer 13.13|2635482|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP053345 (Herbiconiux sp. SALV-R1 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

cggatcaaatccgaagacccggacgaggaa	CRISPR spacer
cacccggaacccgaagaccctgacgaggaa	Protospacer
*.  . .**.********** *********

70. spacer 13.13|2635482|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_014213 (Meiothermus silvanus DSM 9946 plasmid pMESIL01, complete sequence) position: , mismatch: 8, identity: 0.733

cggatcaaatccgaagacccggacgaggaa	CRISPR spacer
cggatcaaagcccaagacccggaaaaaagg	Protospacer
********* ** ********** .*....

71. spacer 13.16|2635710|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH319754 (Marine virus AG-345-L05 Ga0172272_11 genomic sequence) position: , mismatch: 8, identity: 0.733

ttgaaaaccgaacataaaaacagcgatatg	CRISPR spacer
tggaaaaccgaacataaaaaaagacccccg	Protospacer
* ****************** **   . .*

72. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MT764206 (Escherichia phage JEP6, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

73. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_019399 (Enterobacteria phage vB_EcoM_ACG-C40, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

74. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606997 (Enterobacteria phage RB7, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

75. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH751506 (Escherichia phage T2, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

76. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MF001354 (Salmonella phage SG1, partial genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

77. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to AP018813 (Enterobacteria phage T2 DNA, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

78. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_030953 (Shigella phage SHFML-11, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

79. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606996 (Enterobacteria phage RB6, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

80. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN022785 (Escherichia virus VEc20, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

81. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to AY310907 (Enterobacteria phage T2 Gp59 gene, partial cds; Gp32, Frd.3, Frd.2, Frd.1, dihydrofolate reductase, dTMP thymidylate synthase, and NrdA.2 genes, complete cds; and NrdA.1 gene, partial cds) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

82. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606995 (Enterobacteria phage RB5, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

83. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KR269718 (Escherichia phage HY03, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

84. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606994 (Enterobacteria phage RB3, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

85. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KX130862 (Shigella phage SHFML-26, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

86. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KT184311 (Enterobacteria phage GiZh, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

87. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to LR215724 (Yersinia phage fPS-65 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

88. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to LC348380 (Escherichia phage T2 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

89. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK327942 (Escherichia phage vB_EcoM_G50, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcgat	Protospacer
. ****. ******************.

90. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606999 (Enterobacteria phage RB10, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

91. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to KM606998 (Enterobacteria phage RB9, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
attatcagtctgttcatcgtgtttatcaat	Protospacer
. ****. ******************.

92. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP030100 (Roseovarius sp. AK1035 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
acgatgatgctgttcatcgtgttcattttg	Protospacer
.  ** .. **************.******

93. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP020475 (Roseovarius mucosus strain SMR3 plasmid pSMR3-1, complete sequence) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
acgatgatgctgttcatcgtgttcattttg	Protospacer
.  ** .. **************.******

94. spacer 13.21|2636090|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MK496693 (Capybara microvirus Cap1_SP_77, complete genome) position: , mismatch: 8, identity: 0.733

ggtatcgctctgttcatcgtgtttattttg	CRISPR spacer
ttgagccctctgttcatcgtgattatttat	Protospacer
   * * ************** ******

95. spacer 13.26|2636470|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 8, identity: 0.733

tccgctgcaccggggtcgatccggcatata	CRISPR spacer
cccgcaccaccggggtcgatccggtttggt	Protospacer
.****  *****************. *.

96. spacer 13.29|2636698|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH616712 (Microviridae sp. isolate ctci661, complete genome) position: , mismatch: 8, identity: 0.733

ggaagaagcagccgaaatatacgcaagcga	CRISPR spacer
agcagaagcagacgaaatatccgcaacaat	Protospacer
.* ******** ******** *****  .

97. spacer 13.34|2637078|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MH616712 (Microviridae sp. isolate ctci661, complete genome) position: , mismatch: 8, identity: 0.733

ggaagaagcagccgaaatatacgcaagcga	CRISPR spacer
agcagaagcagacgaaatatccgcaacaat	Protospacer
.* ******** ******** *****  .

98. spacer 13.46|2637990|30|NZ_CP042432|CRISPRCasFinder matches to MN693028 (Marine virus AFVG_117M90, complete genome) position: , mismatch: 8, identity: 0.733

tacgttgccggatgaaaacatgaataagat	CRISPR spacer
gaatcaaccggatgcaaacatgaaaaagat	Protospacer
 *  . .******* ********* *****

99. spacer 14.12|2641612|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP018230 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tttcggctttgcctccggggcggttgtgct	CRISPR spacer
gctcggcattgcctccggggcggaactggc	Protospacer
 .***** ***************   ** .

100. spacer 14.12|2641612|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP022566 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK02, complete sequence) position: , mismatch: 8, identity: 0.733

tttcggctttgcctccggggcggttgtgct	CRISPR spacer
gctcggcattgcctccggggcggaactggc	Protospacer
 .***** ***************   ** .

101. spacer 14.12|2641612|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.733

tttcggctttgcctccggggcggttgtgct	CRISPR spacer
cgccggctttgcctccgtggcggtaaggat	Protospacer
. .************** ****** . * *

102. spacer 14.14|2641764|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN693465 (Marine virus AFVG_25M405, complete genome) position: , mismatch: 8, identity: 0.733

attgataattatcttaaagagtatgagtaa	CRISPR spacer
acagataatgatcttaaagattatgaactt	Protospacer
*. ****** ********** *****..

103. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattacggcgcaggcgaaggtgacg	Protospacer
  ********************* .... *

104. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattacggcgcaggcgaaggtgacg	Protospacer
  ********************* .... *

105. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
ttgccgattacggcccaggcggggcgatcg	Protospacer
************** ******..   *  *

106. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP046102 (Rhodococcus sp. AQ5-07 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
caaccgcttacggcgcaggcgaattgggag	Protospacer
. .*** *****************  .*.*

107. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
ttgccgattacggcccaggcggggcgatcg	Protospacer
************** ******..   *  *

108. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 8, identity: 0.733

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
ttgccgattacggcccaggcggggcgatcg	Protospacer
************** ******..   *  *

109. spacer 15.12|2644644|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_030920 (Bacillus phage Eldridge, complete genome) position: , mismatch: 8, identity: 0.733

taccca-----ttgtttgcgaaattcatgggttgg	CRISPR spacer
-----ataagtttgtttgcgaaagtcattggttgt	Protospacer
     *     ************ **** *****

110. spacer 15.13|2644720|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_030920 (Bacillus phage Eldridge, complete genome) position: , mismatch: 8, identity: 0.733

taccca-----ttgtttgcgaaattcatgggttgg	CRISPR spacer
-----ataagtttgtttgcgaaagtcattggttgt	Protospacer
     *     ************ **** *****

111. spacer 15.17|2645024|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

atctggccgggctgaacagcgtttgcctac	CRISPR spacer
atcgggccgggctgaacggcgttgacagtt	Protospacer
*** *************.***** .*   .

112. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP022220 (Bradyrhizobium guangxiense strain CCBAU 53363 plasmid p53363, complete sequence) position: , mismatch: 8, identity: 0.733

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
ttagcgatctggcggacgacagcgttgcta	Protospacer
  ..***.**** ***************..

113. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP030052 (Bradyrhizobium guangdongense strain CCBAU 51649 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
ttagcgatctggcggacgacagcgttgcta	Protospacer
  ..***.**** ***************..

114. spacer 15.18|2645100|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP030054 (Bradyrhizobium guangzhouense strain CCBAU 51670 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aggacgacctgggggacgacagcgttgccg	CRISPR spacer
ttagcgatctggcggacgacagcgttgcta	Protospacer
  ..***.**** ***************..

115. spacer 22.1|3813483|30|NZ_CP042432|CRISPRCasFinder matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 8, identity: 0.733

cagaacccaaaaaccctaaaaactacaaac	CRISPR spacer
tcgcatccaagaaccctaaaaactacagct	Protospacer
. * *.****.****************. .

116. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN693047 (Marine virus AFVG_25M111, complete genome) position: , mismatch: 9, identity: 0.7

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
ggattttgcagaagaagtaacgagaagata	Protospacer
   *************** ****.**

117. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN693506 (Marine virus AFVG_25M112, complete genome) position: , mismatch: 9, identity: 0.7

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
ggattttgcagaagaagtaacgagaagata	Protospacer
   *************** ****.**

118. spacer 13.26|2636470|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP029234 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436d, complete sequence) position: , mismatch: 9, identity: 0.7

tccgctgcaccggggtcgatccggcatata	CRISPR spacer
accgcagcaccggggtcgatctggacggcc	Protospacer
 **** ***************.**   ..

119. spacer 14.4|2641003|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN693674 (Marine virus AFVG_250M120, complete genome) position: , mismatch: 9, identity: 0.7

ggcggtttttaagtgcttccgccgccttgt	CRISPR spacer
ggcgttttttaagtgcttccgaagataaag	Protospacer
**** ****************  * .  .

120. spacer 14.6|2641155|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN856091 (Myoviridae sp. isolate 9, partial genome) position: , mismatch: 9, identity: 0.7

ggataatagtttggaagatgaagggcaaaa	CRISPR spacer
ggatattagtttggaagatgagattgattt	Protospacer
***** ***************..   *

121. spacer 14.12|2641612|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tttcggctttgcctccggggcggttgtgct	CRISPR spacer
cgtcggctttgcccccggggcggcgcgggc	Protospacer
. ***********.*********.   * .

122. spacer 14.19|2642068|30|NZ_CP042432|CRISPRCasFinder,PILER-CR matches to NC_022358 (Sulfuricella denitrificans skB26 plasmid pSCD, complete sequence) position: , mismatch: 9, identity: 0.7

gggatcccgctccaaggcagagtagtattt	CRISPR spacer
aggatgccgctcgaaggcagagtatcggac	Protospacer
.**** ****** *********** ..  .

123. spacer 15.5|2644114|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_019681 (Synechococcus sp. PCC 6312 plasmid pSYN6312.01, complete sequence) position: , mismatch: 9, identity: 0.7

tagatttttaaatgaagtcgctatctgatc	CRISPR spacer
gagatttttaaatgaaatcgctgagggggt	Protospacer
 ***************.*****.   *. .

124. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

125. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

126. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

127. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

128. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

129. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

130. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

131. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

132. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

133. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

134. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

135. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

136. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

137. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

138. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

139. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

140. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

141. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
aagccgattccggcgcaggcgaaggtgacg	Protospacer
  ******* ************* .... *

142. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN694575 (Marine virus AFVG_250M956, complete genome) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
acattgattacgacgcaggcgaatacggcc	Protospacer
 ....*******.*************.*

143. spacer 15.11|2644568|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to MN694768 (Marine virus AFVG_250M955, complete genome) position: , mismatch: 9, identity: 0.7

ttgccgattacggcgcaggcgaatacaggg	CRISPR spacer
acattgattacgacgcaggcgaatacggcc	Protospacer
 ....*******.*************.*

144. spacer 15.17|2645024|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 9, identity: 0.7

atctggccgggctgaacagcgtttgcctac	CRISPR spacer
cggtggccgggctgaccagcgtctgcgcgt	Protospacer
   ************ ******.*** ...

145. spacer 15.17|2645024|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NZ_CP045310 (Micromonospora terminaliae strain DSM 101760 plasmid pLB1, complete sequence) position: , mismatch: 9, identity: 0.7

atctggccgggctgaacagcgtttgcctac	CRISPR spacer
cggtggccgggctgaccagcgtctgcgcgt	Protospacer
   ************ ******.*** ...

146. spacer 15.20|2645252|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.7

cctacgcaggaaggcattgcgtatataaat	CRISPR spacer
ttcgggcaggaagggattgcgtatatcgac	Protospacer
.... ********* *********** .*.

147. spacer 15.21|2645328|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 9, identity: 0.7

cctacgcaggaaggcattgcgtatataaat	CRISPR spacer
ttcgggcaggaagggattgcgtatatcgac	Protospacer
.... ********* *********** .*.

148. spacer 13.11|2635330|30|NZ_CP042432|PILER-CR,CRISPRCasFinder matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 10, identity: 0.667

tccttttgcagaagaagtcacgaaaatcgt	CRISPR spacer
ctacaacgcagaagaagtcacgaaagtcac	Protospacer
.. .  .******************.**..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1557136 : 1563885

Powai_lake_megavirus(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_132130084.1\|1557136_1557865_+	ribonuclease III	A0A167RGU4	Powai_lake_megavirus	3.7e-26	32.7
WP_132130083.1\|1559356_1559929_+	guanylate kinase	K4JYM5	Abalone_herpesvirus	1.5e-19	34.3
WP_132130082.1\|1559929_1560505_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_132130081.1\|1560520_1560949_+	hypothetical protein	NA	NA	NA	NA
WP_147698403.1\|1560955_1561189_-	LysM peptidoglycan-binding domain-containing protein	A0A172JIA8	Bacillus_phage	9.6e-05	45.8
WP_147698255.1\|1561080_1561950_-	hemagglutinin	S5M9Y4	Brevibacillus_phage	2.9e-22	42.5
WP_132130079.1\|1562015_1562654_-	O-methyltransferase	S5YRC3	Mycobacterium_phage	2.8e-14	32.5
WP_132130078.1\|1562655_1563885_-	insulinase family protein	G3MBJ8	Bacillus_virus	3.0e-36	26.4

DBSCAN-SWA_2

3649835 : 3699768

Hokovirus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_132130833.1\|3649835_3650777_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_158640649.1\|3650944_3652042_+	pectate lyase	NA	NA	NA	NA
WP_132130693.1\|3652132_3656251_-	response regulator	A0A1V0SGX0	Hokovirus	1.9e-23	32.0
WP_147698362.1\|3656380_3659572_+	LamG domain-containing protein	NA	NA	NA	NA
WP_147698363.1\|3659708_3663893_+	LamG domain-containing protein	NA	NA	NA	NA
WP_147698364.1\|3663787_3665971_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_132130695.1\|3665970_3666417_+	hypothetical protein	NA	NA	NA	NA
WP_132130696.1\|3666486_3666888_+	VOC family protein	NA	NA	NA	NA
WP_132130697.1\|3666920_3667274_-	TfoX/Sxy family protein	NA	NA	NA	NA
WP_132130698.1\|3667348_3668017_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_132130699.1\|3668200_3668632_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_132130700.1\|3668649_3669045_+	VOC family protein	NA	NA	NA	NA
WP_132130701.1\|3669049_3669922_+	signal peptidase I	NA	NA	NA	NA
WP_132130702.1\|3669996_3670254_+	hypothetical protein	NA	NA	NA	NA
WP_158640650.1\|3670250_3671510_+	hypothetical protein	NA	NA	NA	NA
WP_132130704.1\|3671725_3672448_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_132130705.1\|3672715_3673387_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_132130706.1\|3673577_3674441_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_132130707.1\|3674467_3675868_-	serine hydrolase	A0A2D1GPS1	Mycobacterium_phage	3.2e-26	28.5
WP_132130708.1\|3675996_3676905_-	class A beta-lactamase	NA	NA	NA	NA
WP_132130709.1\|3677002_3678331_+	hypothetical protein	NA	NA	NA	NA
WP_132130710.1\|3678430_3678796_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_132130711.1\|3678797_3679733_+	slipin family protein	NA	NA	NA	NA
WP_132130712.1\|3679729_3680278_+	hypothetical protein	NA	NA	NA	NA
WP_132130713.1\|3680309_3680654_-	hypothetical protein	NA	NA	NA	NA
WP_132130714.1\|3681400_3681790_-	glyoxalase	NA	NA	NA	NA
WP_158640651.1\|3681952_3683575_+	serine hydrolase	NA	NA	NA	NA
WP_147698366.1\|3683732_3684719_+	family 43 glycosylhydrolase	NA	NA	NA	NA
WP_158640652.1\|3684722_3684950_-	hypothetical protein	NA	NA	NA	NA
WP_158640601.1\|3685068_3686685_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_147698298.1\|3687822_3688689_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_132130832.1\|3688685_3688961_-\|transposase	transposase	NA	NA	NA	NA
WP_132130805.1\|3688990_3689605_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_132130806.1\|3689597_3689942_-	transcription initiation protein	NA	NA	NA	NA
WP_132130807.1\|3690277_3692437_+	ABC transporter permease	NA	NA	NA	NA
WP_147698367.1\|3692619_3693777_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_147698368.1\|3693773_3694175_+	hypothetical protein	NA	NA	NA	NA
WP_132130813.1\|3694201_3694957_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.4e-36	35.5
WP_132130809.1\|3695443_3696556_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_132130808.1\|3696644_3697337_+	hypothetical protein	NA	NA	NA	NA
WP_147698369.1\|3697349_3698099_+	hypothetical protein	NA	NA	NA	NA
WP_158640601.1\|3698151_3699768_-\|transposase	IS1634 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

4155715 : 4186675

Catovirus(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_132129755.1\|4155715_4156459_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_132129756.1\|4156549_4157128_-	hypothetical protein	NA	NA	NA	NA
WP_132129757.1\|4157149_4157764_-	hypothetical protein	NA	NA	NA	NA
WP_132129758.1\|4157804_4158026_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_132129759.1\|4158195_4158681_+	DUF4293 domain-containing protein	NA	NA	NA	NA
WP_132129760.1\|4158699_4160418_+	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	2.7e-59	34.9
WP_132129761.1\|4160438_4160954_+	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_132129762.1\|4160965_4161637_+	hypothetical protein	NA	NA	NA	NA
WP_132129763.1\|4161748_4163356_+	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA
WP_132129764.1\|4163381_4164464_+	Ldh family oxidoreductase	NA	NA	NA	NA
WP_132129765.1\|4164507_4165365_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_132129766.1\|4165799_4166939_-	signal peptidase I	NA	NA	NA	NA
WP_132129767.1\|4166982_4167705_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_132129768.1\|4167722_4168436_-	hypothetical protein	NA	NA	NA	NA
WP_132129769.1\|4168448_4169330_-	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	1.6e-15	34.4
WP_132129770.1\|4169332_4170142_-	ParA family protein	Q8JL10	Natrialba_phage	5.0e-24	27.3
WP_132129771.1\|4170261_4170783_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_132129772.1\|4170769_4171279_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_132129773.1\|4171268_4172636_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_132129774.1\|4172647_4173103_-	hypothetical protein	NA	NA	NA	NA
WP_132129775.1\|4173102_4173828_-	hypothetical protein	NA	NA	NA	NA
WP_132129776.1\|4173936_4175634_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	2.3e-23	35.7
WP_132129777.1\|4175812_4178311_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_158640668.1\|4178334_4178499_+	hypothetical protein	NA	NA	NA	NA
WP_132129778.1\|4178506_4180225_+	sodium:solute symporter	NA	NA	NA	NA
WP_132129779.1\|4180245_4180533_-	hypothetical protein	NA	NA	NA	NA
WP_132130832.1\|4180941_4181217_+\|transposase	transposase	NA	NA	NA	NA
WP_147698298.1\|4181213_4182080_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_147698391.1\|4182316_4182598_+\|transposase	transposase	NA	NA	NA	NA
WP_132130828.1\|4182612_4183428_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_132130824.1\|4183592_4184822_+	glycosyltransferase	NA	NA	NA	NA
WP_132130829.1\|4185563_4185845_+\|transposase	transposase	NA	NA	NA	NA
WP_132130828.1\|4185859_4186675_+\|transposase	IS3 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042432

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection