CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP041928	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374A, complete sequence	0 crisprs	csa3	1
NZ_CP041931	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374D, complete sequence	0 crisprs	NA	0
NZ_CP041930	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374C, complete sequence	0 crisprs	NA	1
NZ_CP041929	Klebsiella pneumoniae strain 18-2374 plasmid pSECR18-2374B, complete sequence	0 crisprs	DEDDh	1
NZ_CP041927	Klebsiella pneumoniae strain 18-2374 chromosome, complete genome	3 crisprs	csa3,cas3,DEDDh,WYL,DinG	8

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

13276 : 51631

Escherichia_phage(50.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000616807.1\|13276_13930_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000557619.1\|14022_14280_+	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA
WP_001398199.1\|14212_14614_+	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA
WP_001553819.1\|14750_17648_-\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
WP_001067855.1\|17917_18622_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000219391.1\|18743_19649_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|19645_20884_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|20883_21468_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001336397.1\|21413_21770_+	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|21960_22725_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001067855.1\|22905_23610_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_063840321.1\|23753_24308_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001334766.1\|24438_25269_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_001067855.1\|25900_26605_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000239590.1\|26807_27683_+	class A extended-spectrum beta-lactamase CTX-M-15	A0A1B0VBP7	Salmonella_phage	1.1e-125	82.4
WP_001393253.1\|27729_28062_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_001067855.1\|30383_31088_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014386147.1\|31943_32771_+	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.0e-21	37.6
WP_004152695.1\|32767_33631_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152694.1\|33639_34467_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152693.1\|34475_35486_+	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152692.1\|35479_36349_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004159231.1\|37054_37381_-	hypothetical protein	NA	NA	NA	NA
WP_014386148.1\|37557_38538_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	2.6e-184	98.8
WP_004118209.1\|39739_40003_-\|transposase	transposase	NA	NA	NA	NA
WP_004118208.1\|40017_40281_+	hypothetical protein	NA	NA	NA	NA
WP_004152118.1\|40524_40806_+	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004152117.1\|40840_41410_+	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152116.1\|41524_44320_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152115.1\|44319_44517_+	hypothetical protein	NA	NA	NA	NA
WP_009483782.1\|44754_45504_+	diguanylate cyclase	NA	NA	NA	NA
WP_004152113.1\|45490_46453_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_020314316.1\|48295_49642_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_032422684.1\|49837_50236_-	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_077255522.1\|50284_51631_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP041930

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24948 : 65116

Escherichia_phage(15.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067858.1\|24948_25653_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067858.1\|26703_27408_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_017480460.1\|27718_27913_+	hypothetical protein	NA	NA	NA	NA
WP_015056392.1\|27873_29403_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_004201176.1\|29591_31232_-	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_004201172.1\|31287_31578_-	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201171.1\|31771_32101_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201169.1\|32105_33137_+	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004201168.1\|33147_33786_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201167.1\|33790_34156_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_063860861.1\|34159_34972_-	subclass B1 metallo-beta-lactamase NDM-4	NA	NA	NA	NA
WP_001067834.1\|35250_35955_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_001235713.1\|37438_37996_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|38178_39039_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_012372818.1\|39208_39964_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_014342204.1\|40044_40593_-	Na+/H+ antiporter	NA	NA	NA	NA
WP_076611394.1\|40708_41911_+\|transposase	ISL3-like element ISAeme19 family transposase	A9YX10	Burkholderia_phage	1.0e-102	53.2
WP_099147893.1\|41925_42318_+	molecular chaperone GroEL	A0A2I7SAK5	Vibrio_phage	8.5e-22	58.1
WP_058655923.1\|42310_42706_+	hypothetical protein	NA	NA	NA	NA
WP_040219234.1\|43312_44263_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	5.0e-76	55.6
WP_040219232.1\|44409_44610_-	hypothetical protein	NA	NA	NA	NA
WP_022652286.1\|44663_45296_-	recombinase family protein	A0A1V0E035	Clostridioides_phage	2.5e-07	31.9
WP_058655909.1\|46311_46791_+	hypothetical protein	NA	NA	NA	NA
WP_126530401.1\|46903_47785_-	hypothetical protein	NA	NA	NA	NA
WP_072201938.1\|47966_48866_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	2.9e-17	28.7
WP_072201939.1\|49324_50281_-	Abi family protein	A0A059NT88	Lactococcus_phage	3.5e-08	21.4
WP_072201940.1\|50608_50947_+	hypothetical protein	NA	NA	NA	NA
WP_001525581.1\|51352_52219_+	ParA family protein	NA	NA	NA	NA
WP_058655912.1\|52218_53250_+	ParB/RepB/Spo0J family partition protein	S5WII0	Leptospira_phage	1.8e-07	25.7
WP_000843283.1\|53249_53687_+	hypothetical protein	NA	NA	NA	NA
WP_058655913.1\|53746_53962_-	hypothetical protein	NA	NA	NA	NA
WP_058655914.1\|54056_55430_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_058655915.1\|55478_56753_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	64.0
WP_058655916.1\|56752_57175_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.2e-29	50.8
WP_000343760.1\|57273_58494_+\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA
WP_058655917.1\|58678_59350_-	DNA breaking-rejoining protein	A0A2H4J5W2	uncultured_Caudovirales_phage	2.8e-81	60.4
WP_058655918.1\|59699_60383_+	DNA methylase	A0A2I7RE86	Vibrio_phage	8.7e-30	36.9
WP_047359680.1\|60379_60604_+	hypothetical protein	NA	NA	NA	NA
WP_058655919.1\|60652_61069_+	DUF1380 family protein	NA	NA	NA	NA
WP_058655920.1\|61479_61986_+	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	8.2e-09	31.7
WP_058655921.1\|62115_62379_-	hypothetical protein	NA	NA	NA	NA
WP_098945567.1\|62685_62853_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_059446943.1\|62806_63037_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_058672090.1\|63106_65116_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.1e-23	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP041929

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 107611

120

Salmonella_phage(87.38%)

tail,terminase,portal,integrase

attL 23320:23338|attR 104652:104670

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070611328.1\|457_901_+	hypothetical protein	J9Q7S4	Salmonella_phage	2.0e-59	83.7
WP_023343104.1\|1140_1521_+	hypothetical protein	A0A291AWZ9	Escherichia_phage	1.0e-43	64.3
WP_014342082.1\|1532_1832_+	lipoprotein	NA	NA	NA	NA
WP_064164595.1\|1987_2419_+	hypothetical protein	J9Q6I8	Salmonella_phage	1.4e-65	91.6
WP_070611325.1\|2538_3546_+	regulator	J9Q7Z3	Salmonella_phage	7.0e-145	88.6
WP_070611323.1\|3606_4551_+	exonuclease	J9Q7S6	Salmonella_phage	5.4e-171	92.4
WP_070611321.1\|4550_4817_+	hypothetical protein	J9Q7G8	Salmonella_phage	1.1e-33	83.0
WP_070611318.1\|4819_5893_+	recombinase	J9Q736	Salmonella_phage	6.3e-192	95.4
WP_032440514.1\|7277_7457_+	hypothetical protein	NA	NA	NA	NA
WP_032440513.1\|7453_7789_+	hypothetical protein	J9Q7Z5	Salmonella_phage	8.0e-37	66.7
WP_032734156.1\|7788_8001_+	hypothetical protein	J9Q7S8	Salmonella_phage	4.7e-27	78.6
WP_032423053.1\|8431_9529_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.2e-73	47.3
WP_100091244.1\|9540_9753_+	hypothetical protein	NA	NA	NA	NA
WP_021313778.1\|9857_10502_+	hypothetical protein	J9Q739	Salmonella_phage	3.7e-99	81.1
WP_070611316.1\|11016_12477_+	hypothetical protein	A0A2I6UHU5	Bacillus_phage	6.6e-59	33.2
WP_070611314.1\|12507_13374_-	hypothetical protein	A0A2I6UHT9	Bacillus_phage	1.1e-05	55.8
WP_073579045.1\|13370_13583_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_032734160.1\|14008_15094_+	exonuclease	J9Q7S9	Salmonella_phage	2.0e-182	84.2
WP_072201193.1\|15093_15327_+	hypothetical protein	J9Q7H1	Salmonella_phage	4.4e-18	66.1
WP_019704556.1\|15323_17240_+	AAA family ATPase	J9Q741	Salmonella_phage	3.3e-300	84.8
WP_032734162.1\|17229_17976_+	hypothetical protein	J9Q6J5	Salmonella_phage	1.6e-77	59.7
WP_032443574.1\|17985_18555_+	hypothetical protein	J9Q7Z7	Salmonella_phage	1.4e-94	89.9
WP_064146281.1\|18630_20934_+	ribonucleoside-diphosphate reductase subunit alpha	J9Q7T0	Salmonella_phage	0.0e+00	90.8
WP_014342181.1\|21064_22207_+	ribonucleotide-diphosphate reductase subunit beta	J9Q7H3	Salmonella_phage	9.0e-213	95.8
WP_014342180.1\|22283_23159_+	nucleoside triphosphate pyrophosphohydrolase family protein	J9Q742	Salmonella_phage	4.5e-140	84.7
23320:23338	attL	NA	NA	NA	NA
WP_014342179.1\|23352_24456_+	thymidylate synthase	J9Q6J6	Salmonella_phage	2.5e-180	79.8
WP_019704560.1\|24457_24871_+	hypothetical protein	J9Q7Z8	Salmonella_phage	2.3e-54	76.6
WP_040203768.1\|24867_25344_+	dihydrofolate reductase	J9Q7T1	Salmonella_phage	2.4e-71	79.0
WP_040223254.1\|25343_25988_+	AAA family ATPase	J9Q7H4	Salmonella_phage	5.2e-93	77.1
WP_023279504.1\|26051_26471_+	hypothetical protein	J9Q743	Salmonella_phage	6.5e-52	74.1
WP_014342174.1\|26480_27038_+	3'-5' exonuclease	J9Q6J8	Salmonella_phage	1.4e-86	84.2
WP_040223256.1\|27163_27997_+	hypothetical protein	J9Q7Z9	Salmonella_phage	1.0e-64	57.1
WP_039817730.1\|28181_28775_+	phage N-6-adenine-methyltransferase	J9Q7T2	Salmonella_phage	1.3e-98	84.8
WP_040203299.1\|28972_29215_+	hypothetical protein	J9Q7H5	Salmonella_phage	2.8e-31	84.2
WP_148053330.1\|29779_30367_+	ribonuclease HI	J9Q745	Salmonella_phage	1.3e-90	79.7
WP_060877018.1\|30798_31077_+	hypothetical protein	NA	NA	NA	NA
WP_072042572.1\|31073_31262_+	hypothetical protein	J9Q800	Salmonella_phage	2.2e-07	50.8
WP_019704567.1\|31363_31789_+	tellurite/colicin resistance protein	Q71TK7	Escherichia_phage	9.8e-56	80.9
WP_014342167.1\|31788_31944_+	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.7e-05	61.2
WP_040203292.1\|32071_32650_+	hypothetical protein	J9Q7H6	Salmonella_phage	3.0e-55	57.0
WP_070611311.1\|32778_34464_+	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	0.0e+00	90.9
WP_095889379.1\|34525_35254_+	hypothetical protein	J9Q6K2	Salmonella_phage	6.1e-82	69.4
WP_064146275.1\|35405_35669_+	hypothetical protein	J9Q7T5	Salmonella_phage	3.7e-29	70.5
WP_148053331.1\|35854_36820_-	hypothetical protein	NA	NA	NA	NA
WP_060527990.1\|37243_37561_+	hypothetical protein	J9Q750	Salmonella_phage	4.1e-43	75.2
WP_064146271.1\|37573_37768_+	hypothetical protein	J9Q6K5	Salmonella_phage	1.1e-17	66.7
WP_142917803.1\|38241_38499_-	hypothetical protein	J9Q7T6	Salmonella_phage	3.6e-13	70.0
WP_117616653.1\|39041_39302_+	hypothetical protein	NA	NA	NA	NA
WP_019704577.1\|39317_39536_+	hypothetical protein	J9Q6K7	Salmonella_phage	2.9e-27	81.9
WP_023279445.1\|39548_39761_+	hypothetical protein	J9Q804	Salmonella_phage	4.4e-25	77.9
WP_029463947.1\|39897_40209_+	hypothetical protein	J9Q7T7	Salmonella_phage	8.8e-30	67.0
WP_032439731.1\|40328_40736_+	hypothetical protein	Q6UAS0	Klebsiella_phage	2.1e-23	45.0
WP_070611307.1\|40862_41144_+	ABC transporter	J9Q753	Salmonella_phage	2.6e-41	82.8
WP_064164532.1\|41348_41831_+	hypothetical protein	J9Q805	Salmonella_phage	2.6e-65	71.2
WP_004109904.1\|42422_42626_-	hypothetical protein	J9Q7I3	Salmonella_phage	4.1e-28	95.5
WP_004109892.1\|42676_43327_-	hypothetical protein	J9Q754	Salmonella_phage	8.4e-107	91.7
WP_123609186.1\|43651_43951_-	hypothetical protein	NA	NA	NA	NA
WP_004109890.1\|43960_44491_-	transcriptional regulator	J9Q6L0	Salmonella_phage	9.3e-72	85.1
WP_019704582.1\|44646_45084_+	hypothetical protein	A0A1V0E7W1	Vibrio_phage	9.5e-14	36.4
WP_148053332.1\|45134_45410_-	hypothetical protein	J9Q7T9	Salmonella_phage	1.2e-25	67.0
WP_032423021.1\|45412_46972_-	DEAD/DEAH box helicase	J9Q7I4	Salmonella_phage	1.5e-279	92.9
WP_021313132.1\|47055_47736_+	ParB N-terminal domain-containing protein	J9Q756	Salmonella_phage	2.1e-108	89.3
WP_023279438.1\|47735_48404_+	ParB N-terminal domain-containing protein	J9Q6L1	Salmonella_phage	6.6e-107	91.9
WP_032423019.1\|48400_49042_+	ATP-binding cassette domain-containing protein	J9Q807	Salmonella_phage	6.8e-109	96.7
WP_004109875.1\|49031_49583_+	hypothetical protein	NA	NA	NA	NA
WP_046882063.1\|49579_50470_+	hypothetical protein	J9Q7I6	Salmonella_phage	1.6e-164	96.6
WP_070611305.1\|50479_50746_+	hypothetical protein	J9Q757	Salmonella_phage	2.9e-37	89.8
WP_004109866.1\|50921_51563_+	DNA-binding protein	J9Q6D4	Salmonella_phage	5.0e-96	88.2
WP_148053333.1\|51565_52822_+\|terminase	terminase	J9Q7Y2	Salmonella_phage	1.0e-246	97.1
WP_141751811.1\|52839_54429_+\|portal	phage portal protein	J9Q7R1	Salmonella_phage	1.1e-274	88.5
WP_023279435.1\|54451_55351_+	hypothetical protein	J9Q7F4	Salmonella_phage	6.1e-124	82.6
WP_004109857.1\|55377_56256_+	hypothetical protein	J9Q710	Salmonella_phage	4.7e-153	94.2
WP_070611363.1\|56334_56763_+	Ig domain-containing protein	J9Q6D6	Salmonella_phage	5.1e-28	70.6
WP_021313129.1\|56810_57245_+	hypothetical protein	J9Q7Y3	Salmonella_phage	2.9e-63	84.0
WP_148053334.1\|57244_58078_+	hypothetical protein	J9Q7R2	Salmonella_phage	1.1e-130	83.0
WP_004109848.1\|58175_58520_+	hypothetical protein	J9Q7F6	Salmonella_phage	7.4e-54	92.1
WP_021313126.1\|58510_58984_+	hypothetical protein	J9Q711	Salmonella_phage	1.9e-76	93.6
WP_047066294.1\|58985_59378_+	hypothetical protein	J9Q6D8	Salmonella_phage	2.0e-47	68.3
WP_070611361.1\|59445_60192_+	Ig domain-containing protein	J9Q7Y4	Salmonella_phage	8.1e-106	82.6
WP_004109835.1\|60253_60571_+	hypothetical protein	J9Q7R3	Salmonella_phage	1.8e-46	93.3
WP_004109830.1\|60687_60921_+	hypothetical protein	J9Q7F7	Salmonella_phage	3.4e-34	93.5
WP_148053335.1\|60928_65458_+	tape measure protein	J9Q712	Salmonella_phage	0.0e+00	70.0
WP_040203230.1\|65501_65837_+\|tail	tail protein	J9Q6E1	Salmonella_phage	8.8e-52	85.5
WP_004109820.1\|65923_66622_+\|tail	phage minor tail protein L	J9Q7Y5	Salmonella_phage	1.2e-122	87.4
WP_004109817.1\|66614_67412_+\|tail	tail protein	J9Q7R4	Salmonella_phage	5.4e-140	85.3
WP_019704527.1\|67399_68011_+\|tail	tail assembly protein	J9Q7F8	Salmonella_phage	1.1e-76	72.1
WP_070611357.1\|68027_80162_+	DUF1983 domain-containing protein	J9Q713	Salmonella_phage	3.1e-29	60.7
WP_070611355.1\|80284_81730_+\|tail	tail fiber domain-containing protein	A0A0H4TGH1	Klebsiella_phage	1.0e-40	38.6
WP_004109805.1\|81820_82144_+	hypothetical protein	J9Q6E7	Salmonella_phage	2.3e-49	95.3
WP_148053336.1\|82157_82850_+	hypothetical protein	J9Q7Y7	Salmonella_phage	1.6e-119	89.6
WP_148053337.1\|82852_83104_+	hypothetical protein	J9Q7R6	Salmonella_phage	1.7e-23	71.1
WP_032734133.1\|83520_83913_+	hypothetical protein	A0A077SLR3	Escherichia_phage	1.0e-14	42.2
WP_148053338.1\|83897_84647_+	hypothetical protein	J9Q7Y8	Salmonella_phage	2.7e-16	31.3
WP_060877001.1\|84831_85497_+	AAA family ATPase	J9Q7R7	Salmonella_phage	2.9e-102	83.7
WP_004110193.1\|85496_85859_+	hypothetical protein	J9Q7G3	Salmonella_phage	1.2e-43	97.9
WP_148053339.1\|85902_87615_+	hypothetical protein	NA	NA	NA	NA
WP_114441307.1\|87792_88518_+	hypothetical protein	J9Q7R8	Salmonella_phage	1.6e-127	88.4
WP_070611344.1\|88582_89923_+	AAA family ATPase	J9Q7G4	Salmonella_phage	3.5e-240	95.7
WP_070611343.1\|90075_91194_+	DNA primase	J9Q720	Salmonella_phage	8.2e-203	91.6
WP_064164509.1\|91236_92403_-	hypothetical protein	NA	NA	NA	NA
WP_070611341.1\|92691_93480_+	hypothetical protein	J9Q7Z0	Salmonella_phage	2.6e-70	50.8
WP_050484095.1\|93555_94023_+	hypothetical protein	J9Q7R9	Salmonella_phage	3.4e-49	63.9
WP_070611339.1\|94022_95345_+	DNA ligase	J9Q7G5	Salmonella_phage	6.3e-226	85.2
WP_052951220.1\|95341_95521_+	hypothetical protein	J9Q729	Salmonella_phage	4.6e-15	74.5
WP_023279477.1\|95504_95720_+	hypothetical protein	J9Q6I3	Salmonella_phage	8.5e-24	78.6
WP_087636937.1\|95716_95869_+	hypothetical protein	J9Q7Z1	Salmonella_phage	7.1e-17	84.0
WP_047066207.1\|95865_96165_+	hypothetical protein	J9Q7S1	Salmonella_phage	6.7e-27	65.6
WP_117616652.1\|97217_97319_-	hypothetical protein	NA	NA	NA	NA
WP_064164506.1\|97430_98243_-	hypothetical protein	NA	NA	NA	NA
WP_095889374.1\|98393_99170_+	phosphate starvation-inducible protein PhoH	W8D063	Erwinia_phage	2.2e-90	66.1
WP_070611336.1\|99179_99566_+	hypothetical protein	Q716B1	Shigella_phage	8.3e-46	72.0
WP_032440523.1\|99562_99808_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	9.1e-14	47.4
WP_070611331.1\|99902_100520_+	hypothetical protein	NA	NA	NA	NA
WP_070611330.1\|100529_100940_+	toxin YafO	NA	NA	NA	NA
WP_021313793.1\|101004_101364_-	hypothetical protein	NA	NA	NA	NA
WP_032439777.1\|101712_102813_+\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	9.4e-18	30.0
WP_014342091.1\|102807_103188_-	transcriptional regulator	NA	NA	NA	NA
WP_014342089.1\|103790_106076_+	porphyrin biosynthesis protein	J9Q7G6	Salmonella_phage	8.0e-245	66.1
104652:104670	attR	NA	NA	NA	NA
WP_049594364.1\|106172_107405_+	AAA domain-containing protein	J9Q733	Salmonella_phage	2.2e-212	86.4
WP_071556245.1\|107407_107611_+	hypothetical protein	J9Q6I7	Salmonella_phage	7.2e-25	80.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP041927

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP041927_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041927_1

997070-997355

Orphan

Consensus_repeat	Method
CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTTATTCATCCT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP041927_1

>merge|NZ_CP041927|1|997070-997355|PILER-CR
CTGACCGATAAGCCGCCTTCTTTTGGTATAGCGTCGTGGACAGTTATTCATCCGCGTCACGGGTTCAGATAGCAAAAACCCCGCCGAAGCGGGGTTTTGACATAAAAAAGGTGAAACTGACCGATGAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTTATTCATCCTTTCTCCGCTATTCGAATAGCAAAGACCCCGCCGAAGCGGGGTTTTGACATAAAAAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCT

>NZ_CP041927|1|1|997070-997355|PILER-CR
CTGACCGATAAGCCGCCTTCTTTTGGTATAGCGTCGTGGACAGTTATTCATCCG	CGTCACGGGTTCAGATAGCAAAAACCCCGCCGAAGCGGGGTTTTGACATAAAAAAGGTGAAA
CTGACCGATGAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTTATTCATCCT	TTCTCCGCTATTCGAATAGCAAAGACCCCGCCGAAGCGGGGTTTTGACATAAAAAGGTGAAA
CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041927.1\|WP_004144878.1\|1004243_1005107_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|184956
NZ_CP041927.1\|WP_002917923.1\|993504_993873_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP041927.1\|WP_004149907.1\|995882_996293_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226203
NZ_CP041927.1\|WP_002917920.1\|991914_992307_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP041927.1\|WP_002917925.1\|994915_995617_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP041927.1\|WP_002918206.1\|1007236_1007623_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237119
NZ_CP041927.1\|WP_023284319.1\|997823_998969_-\|glycerate-2-kinase	unknown	unknown	gnl\|CDD\|182392
NZ_CP041927.1\|WP_002917917.1\|990877_991276_+\|membrane-protein	unknown	unknown	gnl\|CDD\|227681
NZ_CP041927.1\|WP_002917922.1\|992391_993378_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP041927.1\|WP_024264626.1\|1002139_1002364_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041927.1\|WP_004888294.1\|1000747_1002079_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_CP041927.1\|WP_002917916.1\|990569_990875_+\|DUF883-domain-containing-protein	unknown	unknown	gnl\|CDD\|226941
NZ_CP041927.1\|WP_002918211.1\|1007648_1008239_+\|DnaA-initiator-associating-protein-DiaA	unknown	unknown	gnl\|CDD\|182811
NZ_CP041927.1\|WP_002917918.1\|991272_991569_+\|membrane-protein	unknown	unknown	gnl\|CDD\|372871
NZ_CP041927.1\|WP_002917960.1\|1002471_1004043_+\|galactarate-dehydratase	unknown	unknown	gnl\|CDD\|274491
NZ_CP041927.1\|WP_040168746.1\|999950_1000721_-\|2-dehydro-3-deoxyglucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
NZ_CP041927.1\|WP_020802042.1\|1005170_1007279_+\|penicillin-binding-protein-activator	unknown	unknown	gnl\|CDD\|225649
NZ_CP041927.1\|WP_004144865.1\|993914_994811_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NZ_CP041927.1\|WP_004150939.1\|996598_997063_+\|OB-fold-putative-lipoprotein	unknown	unknown	gnl\|CDD\|378982
NZ_CP041927.1\|WP_002917952.1\|999033_999924_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197

Protein	Function_ID	Function_description	E-value
NZ_CP041927.1\|WP_004144878.1\|1004243_1005107_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|184956	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional.	0
NZ_CP041927.1\|WP_002917923.1\|993504_993873_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.36085e-39
NZ_CP041927.1\|WP_004149907.1\|995882_996293_-\|hypothetical-protein	gnl\|CDD\|226203	COG3678, CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism].	8.17264e-19
NZ_CP041927.1\|WP_002917920.1\|991914_992307_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.0965e-24
NZ_CP041927.1\|WP_002917925.1\|994915_995617_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.76429e-64
NZ_CP041927.1\|WP_002918206.1\|1007236_1007623_+\|YraN-family-protein	gnl\|CDD\|237119	PRK12497, PRK12497, YraN family protein.	6.84829e-53
NZ_CP041927.1\|WP_023284319.1\|997823_998969_-\|glycerate-2-kinase	gnl\|CDD\|182392	PRK10342, PRK10342, glycerate kinase I; Provisional.	0
NZ_CP041927.1\|WP_002917917.1\|990877_991276_+\|membrane-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	1.16468e-44
NZ_CP041927.1\|WP_002917922.1\|992391_993378_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP041927.1\|WP_004888294.1\|1000747_1002079_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	3.25852e-131
NZ_CP041927.1\|WP_002917916.1\|990569_990875_+\|DUF883-domain-containing-protein	gnl\|CDD\|226941	COG4575, ElaB, Uncharacterized conserved protein [Function unknown].	8.38471e-36
NZ_CP041927.1\|WP_002918211.1\|1007648_1008239_+\|DnaA-initiator-associating-protein-DiaA	gnl\|CDD\|182811	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional.	2.29713e-142
NZ_CP041927.1\|WP_002917918.1\|991272_991569_+\|membrane-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	1.48395e-22
NZ_CP041927.1\|WP_002917960.1\|1002471_1004043_+\|galactarate-dehydratase	gnl\|CDD\|274491	TIGR03248, galactar-dH20, galactarate dehydratase. Galactarate dehydratase converts D-galactarate to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0714).	0
NZ_CP041927.1\|WP_040168746.1\|999950_1000721_-\|2-dehydro-3-deoxyglucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
NZ_CP041927.1\|WP_020802042.1\|1005170_1007279_+\|penicillin-binding-protein-activator	gnl\|CDD\|225649	COG3107, LppC, Putative lipoprotein [General function prediction only].	4.36981e-121
NZ_CP041927.1\|WP_004144865.1\|993914_994811_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.52e-52
NZ_CP041927.1\|WP_004150939.1\|996598_997063_+\|OB-fold-putative-lipoprotein	gnl\|CDD\|378982	pfam12869, tRNA_anti-like, tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	3.01553e-44
NZ_CP041927.1\|WP_002917952.1\|999033_999924_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0

>NZ_CP041927.1|WP_004150939.1|996598_997063_+|OB-fold-putative-lipoprotein
MLLRFRVLPLVFVISLLSGCGLASKAFYSAGDKLFQPGDDAVASMQTYSVAQFLQPFTLNPAKASSDYLGKWVKVRGVIVDIRRKSGIAGSYYFIVTMRDEQNKTDKRLTFNFGSHNSADVEALSNGSVATIVGQVHQVQDSTIPTLQNPKVVK
>NZ_CP041927.1|WP_004149907.1|995882_996293_-|hypothetical-protein
MKLITRIAFATLLTTGFSITAQAADVKAAPAPAQDPIVQHLKLTNDQVAKIKSLHQQLESNVQQISQQEIKDGALINVIDSGKWDEKAVNDQLAAFSKIDQQVRYYRVKYYFEVNKVLTPEQRTQVKKDLADALSE
>NZ_CP041927.1|WP_002917925.1|994915_995617_+|pirin-family-protein
MITTRTAKQCGQADFGWLQARYTFSFGHYFDPKLLGFASLRVLNQEVLAPGASFQARTYPKVDILNLILEGEAEYRDSDGNHVQAKAGEALLIATQPGVSYSEHNLSKEQSLTRMQLWLDACPQRENPLQQKINVADATLQLLASPEGGDNSLQLRQQAWVYHIALEKGEQINVQLHGPRAYLQSIHGSVHAVAQEQQKQALTCGDGAFIRDEANITLVADTPLRALLIDLPV
>NZ_CP041927.1|WP_004144865.1|993914_994811_-|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALSRGWETHLTIVTEALVPTPDLFPLIEKLATKSNTQLSIITEVLAGAWERLEQGRADIVVAPDMHFRSSSEINSRKLYSVLSVYVAAPDHPIHQEPEPLSEVTRVKYRGVAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPLVEKDIAEGRLRVVSPEYTNEIDIIMAWRRDSMGEAKSWCLREIPKLFAGR
>NZ_CP041927.1|WP_002917923.1|993504_993873_+|DUF805-domain-containing-protein
MDWYLKVLKNYIGFGGRARRKEYWMFILVNLILTGVLSIIDKMLGWQRAGGEGILTTIYGVLVFLPWWAVQFRRLHDTDRSAWWLLLLLIPVIGWLVILIFNCQRGTEGNNRFGPDPKPFSY
>NZ_CP041927.1|WP_002917922.1|992391_993378_+|glutathione-S-transferase-family-protein
MGQLVDGVWQDTWYDTKSTGGRFKRSVSAFRNWLTADGAAGPSGEGGFAAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFLPVSVVNPLMLENGWTFDDSFPEATGDTLYQHDFLYQLYLHADPHYTGRVTVPVLWDKKQQTIVSNESAEIIRMFNTAFDGLGARAGDYYPPALREQIDELNGWIYDNVNNGVYKAGFATSQQAYDEAVDAVFTSLERLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKRRISDYLNLYGFLRDIYQMPGIAETVSFPHIRHHYYRSHKTINPTGIISIGPQQDLNEPHGRDQRFR
>NZ_CP041927.1|WP_002917920.1|991914_992307_+|DoxX-family-protein
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGALLPLTILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTIAGGYLLLAITGPGAFSIDRVLNKKW
>NZ_CP041927.1|WP_002917918.1|991272_991569_+|membrane-protein
MNGRQERERQKTQLLRQIQQQRLELSACRRHWHEATAPLDRGWHTLLSLRSWLMVGSGLMAVWSVRHPHFLMRWTKRGLGLWSTWRLVRGILRQSAVR
>NZ_CP041927.1|WP_002917917.1|990877_991276_+|membrane-protein
MANTQHTQGPGQRVFSIGQRIVTLLVEMVETRLRLVVVELEEEKANLFQLLIMTGLTLLFAAFGLMSLLVLVIWAVDAQYRLHVMIATTVVLLLAAAIVGILTLRKARRSTLLRLTRKELENDRALLEEDKS
>NZ_CP041927.1|WP_002917916.1|990569_990875_+|DUF883-domain-containing-protein
MAKENVTDDLRAELKTLADTLEEVLNSSADKSKEEMGKLRSKAESALKESRARLGETSEAILRQTRETAARADDYVRENPWTGVGIGAAVGLVLGVLLSRR
>NZ_CP041927.1|WP_023284319.1|997823_998969_-|glycerate-2-kinase
MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTVEAMIAATQGKEHFAWVTGPLGERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLITTSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQALGARLCDAEGQEIGHGGGSLSRLSRIDLSAIDPRLRDRMIHVACDVTNPLVGEHGASRIFGPQKGATEAMIVELDRNLAHYADVIKTSLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRLDSQSVHGKVPVGVARVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVSTLEEAFRGAFDNIYRASRNIAATLQVGMTTEG
>NZ_CP041927.1|WP_002917952.1|999033_999924_-|2-hydroxy-3-oxopropionate-reductase
MTIKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETATTPKAIAEQCEVIITMLPNSPHVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR
>NZ_CP041927.1|WP_040168746.1|999950_1000721_-|2-dehydro-3-deoxyglucarate-aldolase
MDNAIFPNKFKAALAAHQVQIGCWCALANPISTEVLGLAGFDWLVLDAEHAPNDVTTLIPQLMALKGSSSAQVVRVPTNEPIIIKRMLDIGFYNFLVPFVETAEQAAQAVASTRYPPEGIRGVSVSHRGNMFGTVPDYFAQSNKNISILVQIESQTGVDNVEAIAATEGVDGVFVGPSDLAAALGHLGNAAHPEVQRAIQYIFASAKKHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATHKLADAFKK
>NZ_CP041927.1|WP_004888294.1|1000747_1002079_-|MFS-transporter
MILDSTLDEKKGMPTRYLILLMIFVVTAVNYGDRATLSIAGTEVAKELGLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYSYSLFFWSLFTFLQGFIDVFPLAWAGVSMFFMRFMLGFSEAPSFPANARIVAAWFPAKERGTASAIFNAAQYFSLALFSPLLGWLTFALGWEHVFTVMGIIGFVLTIIWVKFVHNPTDHPRMSAAELKYISEGGAVVDMDHKKEATPAAGPKMDYIRQLLTNRMMLGVFFGQYFLNTITWFFLTWFPIYLVQDKGMSILKVGFVASIPALFGFAGGVLGGLFSDYLIGRGCTLTFARKLPIVLGMLLASSIILCNYTASTPLVITLMALAFFGKGFGALGWPVISDVAPKEIVGLCGGVFNVFGNVASIATPLVIGYIVSELHSFNGALIFVGGSALMMMVCYLFVVGDIKRMELQK
>NZ_CP041927.1|WP_024264626.1|1002139_1002364_-|hypothetical-protein
MIGITPFYDANLCRAGNRKKCGLAPMTYGISTIMALNNNFILWVCIVSGGGVLIILSHVFEVIDMRIDSFNIVF
>NZ_CP041927.1|WP_002917960.1|1002471_1004043_+|galactarate-dehydratase
MADIAIRQQSPTAFYIKVDPTDNVAIIVNDRGLTAGTRFPDGLTLVEHIPQGHKVALVDIPAHGEIIRYGEVIGYAVRDIPQGSWIDESLVELPTAPPLNTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPNYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLQGTEDVKSIPVDSASIVSLQDEKHVGFKSMVDDILQVAERHLAKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEEVGKRLLEEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEETIEDVGRKLFEFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT
>NZ_CP041927.1|WP_004144878.1|1004243_1005107_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MKQHESADNSQGQLYIVPTPIGNLSDITQRALEVLQAVDLIAAEDTRHTGLLLQHFAINARLFALHDHNEQQKAETLLAKLKEGQNIALVSDAGTPLINDPGYHLVRTCREANIRVVPLPGPCAAIAALSAAGLPSDRFCYEGFLPAKSKGRRDTLKALEEEPRTLIFYESTHRLVESLEDICAVLGESRYVVLARELTKTWESIHGAPIGELVAWVKEDENRRKGEMVLIVEGFKAQEEALPAAALRTLALLQAELPLKKAAALAAEIHGVKKNALYKYALEQQGE
>NZ_CP041927.1|WP_020802042.1|1005170_1007279_+|penicillin-binding-protein-activator
MVPSTFLRSKPARCLPVLLATLIFAGCGTHTQDQSAAFMQGTSQANSSFYLQQMQQSTNDSKTNWQLLAIRALLQEGKKQQAIDLFNQLPANLNSTQAREQSLLAVEVKLAQNDYQAARNLLAKIDPTNLEQPQQARYWQAQIDASQGKPSLTLLRALIAQQPLLSDAKQRQKNIDATWQALTSMPQDQANALVINADENILQGWLDLQRMWFDNRNDPTLLKAGVKDWQTRYPQNPGAKMLPTALVNMQNYKPASINKIALFLPLNGQASIFGRTIQQGFEAAKNGAPSVTGSAVPAQVAQAANVSGNDDVVSPSQAEISDLTATGSRADPVQAPTQDQAAPAAEPAAQAPATSTTPQTTASPATQPVTAPAAQPQPVVATAANPSAELKIYDTTSQPISQLLAQAQQDGATLVVGPLLKENVEEVIKSNTPLNVLALNQPEKVESRANLCYFALSPEDEARDAARHIHQQGKQTPLLLVPRGALGDRVVSAFADEWLKLGGASVLQQRFGSTAELRAGVNGGGGIALSGTPVSTLPSAQNSILGSADEMPVSSGGSVDAAYILATPEQIAYIKPMIAMRNGSQSNVTLYASSRSAQGTAGPDFRLEMEGLQYSEIPMLAGSNPSLMQQALSAVRNDYSLARLYAMGADAWSLANHFTQMRQTPGFELNGNTGDLTANQDCVINRKLSWLKYQQGKIVPAS
>NZ_CP041927.1|WP_002918206.1|1007236_1007623_+|YraN-family-protein
MAQVPAGKNRSGQLSKQTGDAWENQARRWLEGQGLRFIAANARERGGEIDLIMRDGTVTVFIEVRYRRSARYGDAAASVTPQKQQRLLKAARLWLCRQNGSFETVDCRFDVVAFTGNDIQWLKNAFGE
>NZ_CP041927.1|WP_002918211.1|1007648_1008239_+|DnaA-initiator-associating-protein-DiaA
MLDRIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKILCCGNGTSAANAQHFAASMINRFETERPGLPAIALNTDNVVLTAIANDRLHDEIYAKQVRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGQQDVEIRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD

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Crispr_ID: NZ_CP041927_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041927_2

2421151-2421236

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041927_2

>merge|NZ_CP041927|2|2421151-2421236|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP041927|2|1|2421151-2421236|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041927.1\|WP_002888324.1\|2412089_2412911_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP041927.1\|WP_004177431.1\|2410856_2411705_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP041927.1\|WP_023302315.1\|2419383_2421009_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP041927.1\|WP_023343000.1\|2412907_2413897_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP041927.1\|WP_016531719.1\|2429790_2430486_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP041927.1\|WP_002888337.1\|2418695_2419394_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP041927.1\|WP_002888332.1\|2417835_2418663_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP041927.1\|WP_004177424.1\|2430623_2432126_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP041927.1\|WP_002888345.1\|2421333_2422698_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP041927.1\|WP_023342998.1\|2432136_2433846_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP041927.1\|WP_002888323.1\|2411709_2412087_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP041927.1\|WP_004147026.1\|2415243_2417592_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP041927.1\|WP_004178574.1\|2424163_2427070_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP041927.1\|WP_023342999.1\|2427257_2429615_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP041927.1\|WP_004145972.1\|2434183_2435029_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP041927.1\|WP_002888373.1\|2435157_2435925_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP041927.1\|WP_004177427.1\|2423491_2424151_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP041927.1\|WP_002888347.1\|2422877_2423417_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP041927.1\|WP_002888320.1\|2409783_2410263_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP041927.1\|WP_002888329.1\|2413902_2415189_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
NZ_CP041927.1\|WP_002888324.1\|2412089_2412911_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP041927.1\|WP_004177431.1\|2410856_2411705_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP041927.1\|WP_023302315.1\|2419383_2421009_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	2.22281e-172
NZ_CP041927.1\|WP_023343000.1\|2412907_2413897_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP041927.1\|WP_016531719.1\|2429790_2430486_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP041927.1\|WP_002888337.1\|2418695_2419394_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP041927.1\|WP_002888332.1\|2417835_2418663_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP041927.1\|WP_004177424.1\|2430623_2432126_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP041927.1\|WP_002888345.1\|2421333_2422698_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP041927.1\|WP_023342998.1\|2432136_2433846_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP041927.1\|WP_002888323.1\|2411709_2412087_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP041927.1\|WP_004147026.1\|2415243_2417592_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP041927.1\|WP_004178574.1\|2424163_2427070_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP041927.1\|WP_023342999.1\|2427257_2429615_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP041927.1\|WP_004145972.1\|2434183_2435029_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP041927.1\|WP_002888373.1\|2435157_2435925_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP041927.1\|WP_004177427.1\|2423491_2424151_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.5539e-160
NZ_CP041927.1\|WP_002888347.1\|2422877_2423417_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP041927.1\|WP_002888320.1\|2409783_2410263_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP041927.1\|WP_002888329.1\|2413902_2415189_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>NZ_CP041927.1|WP_023302315.1|2419383_2421009_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLELSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>NZ_CP041927.1|WP_002888337.1|2418695_2419394_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP041927.1|WP_002888332.1|2417835_2418663_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP041927.1|WP_004147026.1|2415243_2417592_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP041927.1|WP_002888329.1|2413902_2415189_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP041927.1|WP_023343000.1|2412907_2413897_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDLDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP041927.1|WP_002888324.1|2412089_2412911_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP041927.1|WP_002888323.1|2411709_2412087_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP041927.1|WP_004177431.1|2410856_2411705_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKSLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP041927.1|WP_002888320.1|2409783_2410263_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP041927.1|WP_002888345.1|2421333_2422698_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP041927.1|WP_002888347.1|2422877_2423417_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP041927.1|WP_004177427.1|2423491_2424151_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVALVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP041927.1|WP_004178574.1|2424163_2427070_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP041927.1|WP_023342999.1|2427257_2429615_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLSDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP041927.1|WP_016531719.1|2429790_2430486_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQRIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP041927.1|WP_004177424.1|2430623_2432126_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP041927.1|WP_023342998.1|2432136_2433846_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKENVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP041927.1|WP_004145972.1|2434183_2435029_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP041927.1|WP_002888373.1|2435157_2435925_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP041927_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP041927_3

3300367-3300444

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCACCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP041927_3

>merge|NZ_CP041927|3|3300367-3300444|CRISPRCasFinder
AAGGCGTCAGCCGCCACCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTCAGCCGCCGCCCGGCA

>NZ_CP041927|3|2|3300367-3300444|CRISPRCasFinder
AAGGCGTCAGCCGCCACCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTCAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP041927.1\|WP_023302146.1\|3293247_3294204_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP041927.1\|WP_002895648.1\|3305574_3306297_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP041927.1\|WP_002895358.1\|3294265_3294991_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP041927.1\|WP_002895655.1\|3307671_3309693_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP041927.1\|WP_004223758.1\|3301145_3302435_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP041927.1\|WP_004147672.1\|3298443_3299826_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP041927.1\|WP_023302145.1\|3304826_3305582_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP041927.1\|WP_004183472.1\|3296818_3298345_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP041927.1\|WP_002895580.1\|3302648_3303689_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP041927.1\|WP_004151699.1\|3295133_3296822_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP041927.1\|WP_071562410.1\|3307383_3307695_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041927.1\|WP_004212869.1\|3287049_3287481_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|185353
NZ_CP041927.1\|WP_002895652.1\|3307047_3307260_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP041927.1\|WP_004142122.1\|3290493_3291777_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP041927.1\|WP_004152853.1\|3306238_3306961_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP041927.1\|WP_004183475.1\|3303685_3304843_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP041927.1\|WP_024622871.1\|3292033_3293251_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP041927.1\|WP_048289837.1\|3287532_3290220_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775
NZ_CP041927.1\|WP_048289836.1\|3285430_3286516_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP041927.1\|WP_002895575.1\|3300598_3301075_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339

Protein	Function_ID	Function_description	E-value
NZ_CP041927.1\|WP_023302146.1\|3293247_3294204_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	6.77924e-178
NZ_CP041927.1\|WP_002895648.1\|3305574_3306297_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	4.52132e-105
NZ_CP041927.1\|WP_002895358.1\|3294265_3294991_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP041927.1\|WP_004223758.1\|3301145_3302435_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP041927.1\|WP_004147672.1\|3298443_3299826_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP041927.1\|WP_023302145.1\|3304826_3305582_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.36239e-160
NZ_CP041927.1\|WP_004183472.1\|3296818_3298345_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP041927.1\|WP_002895580.1\|3302648_3303689_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP041927.1\|WP_004151699.1\|3295133_3296822_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP041927.1\|WP_002895655.1\|3307671_3309693_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP041927.1\|WP_004212869.1\|3287049_3287481_+\|universal-stress-protein	gnl\|CDD\|185353	PRK15456, PRK15456, universal stress protein UspG; Provisional.	7.32546e-44
NZ_CP041927.1\|WP_004142122.1\|3290493_3291777_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP041927.1\|WP_004152853.1\|3306238_3306961_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	3.17026e-74
NZ_CP041927.1\|WP_004183475.1\|3303685_3304843_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP041927.1\|WP_024622871.1\|3292033_3293251_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP041927.1\|WP_048289837.1\|3287532_3290220_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP041927.1\|WP_048289836.1\|3285430_3286516_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.73563e-65
NZ_CP041927.1\|WP_002895575.1\|3300598_3301075_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117

>NZ_CP041927.1|WP_004147672.1|3298443_3299826_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP041927.1|WP_004183472.1|3296818_3298345_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDVYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLARLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLIGEGKARVRGGDWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP041927.1|WP_004151699.1|3295133_3296822_+|urocanate-hydratase
MSQSKYRQLDVRAPRGTTLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVKALKNLESDETLLVQSGKPVGVFKTHENSPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYQGSLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQSRIDFRLRTRYVDEQATSLDDALARIKKYTAEGRAISIALCGNAAEIVPELVKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLHNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP041927.1|WP_002895358.1|3294265_3294991_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP041927.1|WP_023302146.1|3293247_3294204_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIARAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEVAHQALREAVADCQRAGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLARLLRIVEPLCRSGKLQAVDLVEFNPLFDIDGQGARAAARVAWQIAHWWR
>NZ_CP041927.1|WP_024622871.1|3292033_3293251_+|imidazolonepropionase
MTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDANGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASMHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP041927.1|WP_004142122.1|3290493_3291777_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATVGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP041927.1|WP_048289837.1|3287532_3290220_+|cation-transporting-P-type-ATPase
MNTDKPGAPYYQRSVEETLASVQSSPEGISGTEAATRLQQYGENALPQKPGKPAWLRFIAHFNDVLIYVLLAAALLKAVMGHWIDMAVILAVAVVNALIGFIQESNAEKSLQSIRNMLSSEAVAIRQGNHETIPTTSLVPGDIVVIRAGDRIPADLRVIEAHNLRVEEAILTGESTVVEKTTEPLSGDLPLGDRSNLLFSGTTVSSGAGKGIVVATGGDTELGHINQMMAGIEKHRTPLLVQMDKLGKAIFILILVMMAALFVFSLLFRDMPVSELMLSLISLAVASVPEGLPAIISIILSLGVQAMARQKAIIRKLPTVKTLGAMTVICSDKTGTLTMNEMTVKAVITADSVYRVEGDSYEQVGKIYAIDDPTPVTIAPGSLFERYLRTIDLCNDSQLIKEESGLWKITGGPTEGALKVLAAKVTLPPLTSELRSKIPFDSQYKYMSTLYRLGEEEVVLVTGAPDVLFRLCQYQQSDSGLQPLDLPYWEGKIEEYAREGLRMVAAAWKPAAAGQTELTHQDLQQGVILLGVAGMMDPPRPEAITAIADCLQAGIRVKMITGDHPQTAMSIGKMLGIGNAGNAITGRELEVMDDAQLSVAAQQFDIFARTSPEDKFRLVQALQSKKEIVGMTGDGVNDAPALKQADVGVAMGIKGTEVTKEAADMVLTDDNFATIASAVREGRRVYDNLKKTILFVMPTNLAQGLLIVIALLAGNVLPLTPVLILWMNMATSATLSFGLAFEAGEKNIMRRPPRDPKIHVMDGFAIWRVAFVGSMIAVSAFILEAWLQPRGYSPEFIRTVLLQTLVTAQWFYMLNCRVSDGFSLTKGLLANKGIWIVSGVLLLLQLLIIYAPFMQMLFGTTGLPFRYWVITFIIGFAMFLIVELEKPLTRKWRSA
>NZ_CP041927.1|WP_004212869.1|3287049_3287481_+|universal-stress-protein
MYKNIVVPVDVFDAGLADKALSHAKFLAQHSAGQIHLIHVIPAFSPVLTRGFISDARKMEDHLLNTAKEKLSELVKKNGLAEDASHLYVRSGNVRDQVIALTDELKADVVIVGSRNPGIQTHLLGSEAANIVRYAHVPVFVVR
>NZ_CP041927.1|WP_048289836.1|3285430_3286516_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYFSLIPVVIIFTTACDQKAPTVESAPRMVKVAQVTAVGNTQQRTFPALIESGDSTELSFKRGGQVESLDIRQGASVAQGQTLARLNAREAQQRVNERQTAATLAQRQFDRFQTLAGRQAISQAEMDVQRANRDAANAALKIAREELAQMSLIAPFSGIAAGVHIRNHQVVAAGQPVITLTRTDLLDVVFSIPENLFTSLDIRNTAYRPVVRINTLPGREFTAEYKEHTGSSDNSTLTWQIVLTMPRPDDFPAVGGVSGTVTVNLGNLPASAGRETLIVPAEAVFNPDNRPKNEPVVWVVKGDNAHRYLEERKVAVGEVTSQGVAITDGLRAGEQVVAAGVSELHAGQPVRVWTRERGL
>NZ_CP041927.1|WP_002895575.1|3300598_3301075_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP041927.1|WP_004223758.1|3301145_3302435_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVASESLRLLESGEWQPQVAAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMATLQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP041927.1|WP_002895580.1|3302648_3303689_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP041927.1|WP_004183475.1|3303685_3304843_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALADWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGQQRRDILAARIRQFREGMGEVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHTEDINRLLEVLHGHSE
>NZ_CP041927.1|WP_023302145.1|3304826_3305582_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAISELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP041927.1|WP_002895648.1|3305574_3306297_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHPAP
>NZ_CP041927.1|WP_004152853.1|3306238_3306961_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALDEPLLAQWITPDPAP
>NZ_CP041927.1|WP_002895652.1|3307047_3307260_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPPFSVGHRKSAAPALTRPDGIGV
>NZ_CP041927.1|WP_071562410.1|3307383_3307695_-|hypothetical-protein
MQYKRFTHQSEPEKRISGRCLILPPGPFFANKLYWIFKQCVLMITPQKGLIGRQAGCKMRVRRNNPPAARVIPRKFYLLTFVKRTDETFMAADDAFLTPIDFI
>NZ_CP041927.1|WP_002895655.1|3307671_3309693_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

142217 : 209179

Klebsiella_phage(50.0%)

tRNA,head,protease,tail,terminase,integrase,portal,holin,capsid

attL 164948:164971|attR 206207:206230

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009307375.1\|142217_143030_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_002913227.1\|143029_144043_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_009307374.1\|144106_145243_-	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.6e-20	27.8
WP_023282884.1\|145353_146331_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_004149211.1\|146417_147593_-	MFS transporter	NA	NA	NA	NA
WP_002913291.1\|147802_149023_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_023301691.1\|149181_151170_+\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_002913338.1\|151231_151513_-	YfcL family protein	NA	NA	NA	NA
WP_002913339.1\|151544_152093_-	elongation factor P hydroxylase	NA	NA	NA	NA
WP_002913340.1\|152092_152902_-	TSUP family transporter	NA	NA	NA	NA
WP_004174960.1\|152901_153726_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_023287874.1\|153728_154814_-	chorismate synthase	A0A291AU41	Pandoravirus	7.7e-89	46.6
WP_040181913.1\|154855_155788_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_002913348.1\|155955_156507_+	endonuclease SmrB	NA	NA	NA	NA
WP_002913355.1\|156527_157013_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_004174952.1\|157222_159367_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_002913358.1\|159366_160677_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_002913359.1\|160836_161121_-	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_004149222.1\|161488_162817_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_002913362.1\|162878_163640_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_004149224.1\|163929_164859_+	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	6.7e-134	81.4
164948:164971	attL	NA	NA	NA	NA
WP_109027944.1\|165065_165437_-	hypothetical protein	K7PGV5	Enterobacterial_phage	8.3e-27	53.7
WP_109027943.1\|165393_165633_-	DNA polymerase V	I6PD82	Cronobacter_phage	2.2e-20	54.4
WP_101998377.1\|166006_166474_+	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	2.0e-22	42.6
WP_080925616.1\|166482_166863_+	hypothetical protein	NA	NA	NA	NA
WP_109027942.1\|167113_167914_-	hypothetical protein	NA	NA	NA	NA
WP_109027941.1\|169963_173032_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	66.2
WP_029497207.1\|173028_173415_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	4.7e-33	50.8
WP_064159804.1\|173422_173905_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.7e-56	67.7
WP_001018848.1\|173891_174371_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.9e-76	78.6
WP_070991631.1\|174370_176797_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	83.5
WP_077270814.1\|176858_177290_-	hypothetical protein	A0A286S1N7	Klebsiella_phage	2.2e-63	94.3
WP_001333686.1\|177286_177550_-	hypothetical protein	A0A286S1P2	Klebsiella_phage	6.9e-44	98.9
WP_065806535.1\|177582_177936_-\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	1.1e-60	98.3
WP_000115125.1\|177979_178471_-	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
WP_000561415.1\|178526_178892_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.9e-61	92.6
WP_004216814.1\|178888_179428_-	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	3.0e-94	99.4
WP_070991632.1\|179420_179753_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	9.0e-57	99.1
WP_004143899.1\|179754_179952_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
WP_017880223.1\|180012_180339_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
WP_044067369.1\|180286_180529_-	hypothetical protein	NA	NA	NA	NA
WP_070991633.1\|180565_181729_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	1.3e-211	99.5
WP_077270815.1\|181740_182421_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	3.5e-124	99.6
WP_070991634.1\|182426_183704_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	1.8e-246	99.5
WP_004143904.1\|183706_185239_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	3.9e-296	100.0
WP_004143905.1\|185248_185683_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
WP_017880219.1\|185804_186014_-	hypothetical protein	A0A286N2R4	Klebsiella_phage	7.0e-31	100.0
WP_077270817.1\|186026_186317_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	3.8e-51	94.8
WP_023339166.1\|186388_186874_-	hypothetical protein	NA	NA	NA	NA
WP_065519868.1\|186992_187238_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	8.7e-33	93.8
WP_031592520.1\|187304_187694_-	hypothetical protein	Q1MVJ1	Enterobacteria_phage	8.7e-27	48.4
WP_031592522.1\|187778_188267_-	hypothetical protein	NA	NA	NA	NA
WP_049026356.1\|188337_188535_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	1.1e-22	83.6
WP_070991637.1\|188485_188761_-	hypothetical protein	NA	NA	NA	NA
WP_070991639.1\|188763_189393_-	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	8.7e-85	73.9
WP_000243811.1\|189392_189674_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.8e-19	48.4
WP_001294159.1\|189660_190047_-	membrane protein	A0A192Y8P2	Salmonella_phage	1.6e-57	90.6
WP_001018764.1\|190212_190452_-	hypothetical protein	NA	NA	NA	NA
WP_070991641.1\|190602_191181_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	4.9e-50	57.2
WP_070991643.1\|191177_191819_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	1.9e-82	68.0
WP_050484678.1\|191815_192460_-	NinG family protein	A0A1W6JNX3	Morganella_phage	1.9e-39	54.3
WP_109027976.1\|192429_193401_-	DNA primase	A0A1B5FPA8	Escherichia_phage	1.7e-108	61.6
WP_070991647.1\|193397_194927_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	8.6e-203	66.9
WP_070991649.1\|194919_195195_-	hypothetical protein	NA	NA	NA	NA
WP_025711394.1\|195356_195635_-	hypothetical protein	NA	NA	NA	NA
WP_029497186.1\|195673_196189_-	hypothetical protein	A0A1C9II13	Salmonella_phage	1.5e-58	63.4
WP_109027975.1\|196211_196427_-	cell division protein	NA	NA	NA	NA
WP_109027974.1\|196527_197154_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.3e-43	47.3
WP_109027973.1\|197455_197815_+	hypothetical protein	NA	NA	NA	NA
WP_109027972.1\|197960_198485_-	hypothetical protein	NA	NA	NA	NA
WP_004104278.1\|198842_199202_+	hypothetical protein	NA	NA	NA	NA
WP_048267936.1\|199245_200058_+	DUF2303 family protein	NA	NA	NA	NA
WP_064188250.1\|200139_201000_+	hypothetical protein	A0A2H4J902	uncultured_Caudovirales_phage	2.3e-72	53.1
WP_032426413.1\|201189_201318_+	hypothetical protein	NA	NA	NA	NA
WP_109027971.1\|201314_201539_+	hypothetical protein	S4TVX5	Salmonella_phage	6.4e-14	50.8
WP_145981949.1\|201561_202071_+	hypothetical protein	NA	NA	NA	NA
WP_004864289.1\|202070_202586_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	2.9e-70	76.4
WP_109027969.1\|202582_203242_+	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	7.3e-50	56.1
WP_071986589.1\|203177_203435_+	hypothetical protein	G3CFG7	Escherichia_phage	1.2e-13	61.8
WP_061891355.1\|203475_204789_-	hypothetical protein	NA	NA	NA	NA
WP_009309602.1\|204839_206012_-\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	4.7e-201	86.0
WP_004174945.1\|206530_207013_+	WbuC family cupin fold metalloprotein	NA	NA	NA	NA
206207:206230	attR	NA	NA	NA	NA
WP_023301636.1\|207379_208261_+	hypothetical protein	A0A2H4JEC4	uncultured_Caudovirales_phage	1.5e-05	56.8
WP_004149227.1\|208270_209179_-	transcriptional regulator CynR	A0A2P0ZL89	Lactobacillus_phage	4.6e-10	24.2

DBSCAN-SWA_2

2895360 : 2946744

Cronobacter_phage(27.08%)

tRNA,head,terminase,lysis,integrase

attL 2898244:2898290|attR 2947216:2947262

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004143010.1\|2895360_2896746_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
WP_004143016.1\|2896791_2897004_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143017.1\|2897005_2897872_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_071579666.1\|2897910_2898234_+	hypothetical protein	NA	NA	NA	NA
2898244:2898290	attL	NA	NA	NA	NA
WP_021441323.1\|2898303_2899467_-\|integrase	site-specific integrase	G8C7S0	Escherichia_phage	2.9e-203	87.1
WP_071531921.1\|2899343_2899679_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_040182114.1\|2899680_2899899_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	4.4e-12	52.2
WP_040182113.1\|2899895_2900423_-	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.1e-56	61.0
WP_040182112.1\|2900451_2901075_-	exonuclease	A0A0S2SY31	Pseudomonas_phage	5.8e-57	59.2
WP_040182110.1\|2901071_2901818_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	7.0e-65	67.7
WP_040182107.1\|2901834_2902119_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.7e-40	81.9
WP_019704100.1\|2902208_2902403_-	hypothetical protein	NA	NA	NA	NA
WP_024622729.1\|2902830_2903034_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	1.0e-18	71.6
WP_032434120.1\|2903082_2903628_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_032434121.1\|2903618_2904335_-	hypothetical protein	NA	NA	NA	NA
WP_004178801.1\|2904533_2904653_-	hypothetical protein	NA	NA	NA	NA
WP_024622727.1\|2904675_2905365_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.0e-86	70.6
WP_004178811.1\|2905469_2905703_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_004139615.1\|2905742_2905964_+	bacteriophage CII family protein	NA	NA	NA	NA
WP_040181694.1\|2906049_2906847_+	DNA-binding protein	A0A2H4J902	uncultured_Caudovirales_phage	2.8e-88	67.9
WP_040181719.1\|2906906_2907872_+	replication protein	K7PGZ0	Enterobacteria_phage	5.1e-60	78.9
WP_040181695.1\|2907868_2908606_+	Replication protein P	A0A0K2FIT1	Enterobacteria_phage	6.9e-65	55.2
WP_004218528.1\|2908602_2908905_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_040181698.1\|2908901_2909324_+	hypothetical protein	R9TME7	Aeromonas_phage	1.5e-11	39.9
WP_048322083.1\|2909320_2909584_+	DUF4752 family protein	T1S9K2	Salmonella_phage	1.3e-29	75.6
WP_048322084.1\|2909576_2909774_+	hypothetical protein	NA	NA	NA	NA
WP_048322086.1\|2910276_2910795_+	hypothetical protein	G9L6B3	Escherichia_phage	1.8e-91	92.7
WP_048322087.1\|2911806_2912073_+	hypothetical protein	A0A077SLR0	Escherichia_phage	4.6e-27	69.8
WP_032432693.1\|2912065_2912263_+	hypothetical protein	NA	NA	NA	NA
WP_048322089.1\|2912591_2912849_+	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	6.4e-26	74.0
WP_016530701.1\|2913039_2913507_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	1.5e-33	46.5
WP_032431555.1\|2913487_2913658_+	NinE family protein	G8C7V4	Escherichia_phage	5.7e-15	73.2
WP_058842819.1\|2913650_2914286_+	NinG family protein	M9NYX8	Enterobacteria_phage	2.2e-80	77.0
WP_048322092.1\|2914282_2914423_+	YlcG family protein	NA	NA	NA	NA
WP_048322093.1\|2914419_2915109_+	antiterminator	I6PDF8	Cronobacter_phage	1.9e-56	54.5
WP_048322094.1\|2915453_2915978_-	hypothetical protein	NA	NA	NA	NA
WP_004151282.1\|2916405_2916654_+	hypothetical protein	NA	NA	NA	NA
WP_004146527.1\|2916656_2917187_+	lysozyme	G9L6J6	Escherichia_phage	5.4e-80	79.7
WP_058842818.1\|2917183_2917651_+\|lysis	lysis protein	A0A192Y689	Salmonella_phage	1.0e-53	71.6
WP_058842820.1\|2918224_2918683_-	hypothetical protein	NA	NA	NA	NA
WP_058842816.1\|2919532_2920159_+	hypothetical protein	I6S676	Salmonella_phage	8.4e-104	84.9
WP_048294303.1\|2920189_2920657_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.5e-57	73.8
WP_048294304.1\|2920640_2921939_+\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	3.0e-241	94.3
WP_058842815.1\|2921951_2923415_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	4.0e-149	56.1
WP_064148479.1\|2923347_2924361_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.5e-110	67.5
WP_049185996.1\|2924460_2924811_+	hypothetical protein	NA	NA	NA	NA
WP_040186437.1\|2924883_2926269_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.5e-153	59.7
WP_058842813.1\|2926272_2926701_+	hypothetical protein	F1C5E0	Cronobacter_phage	8.1e-42	60.8
WP_004191540.1\|2926712_2927807_+	hypothetical protein	F1C5E1	Cronobacter_phage	2.2e-123	62.8
WP_058842812.1\|2927817_2928093_+	hypothetical protein	NA	NA	NA	NA
WP_058842811.1\|2928095_2928476_+	hypothetical protein	F1C5E2	Cronobacter_phage	1.8e-29	56.1
WP_038434988.1\|2928475_2928649_+	hypothetical protein	Q5G8X7	Enterobacteria_phage	1.2e-12	51.8
WP_058842810.1\|2928648_2929011_+	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	3.3e-20	49.2
WP_004151265.1\|2929013_2929439_+	hypothetical protein	R9TPP7	Aeromonas_phage	5.1e-28	47.9
WP_048294319.1\|2929435_2929828_+	hypothetical protein	G0ZNE4	Cronobacter_phage	2.0e-34	51.9
WP_048294321.1\|2929896_2930649_+	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	1.7e-42	41.8
WP_004178855.1\|2930701_2931385_+	hypothetical protein	G0ZNE7	Cronobacter_phage	2.3e-75	59.7
WP_049182521.1\|2931689_2931995_+	hypothetical protein	NA	NA	NA	NA
WP_129312537.1\|2931991_2932357_+	hypothetical protein	NA	NA	NA	NA
WP_072061015.1\|2932367_2932799_+	hypothetical protein	NA	NA	NA	NA
WP_048294323.1\|2932835_2933309_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	2.1e-14	40.6
WP_071599308.1\|2933445_2933784_+	hypothetical protein	NA	NA	NA	NA
WP_023328739.1\|2933791_2934112_+	hypothetical protein	NA	NA	NA	NA
WP_129693860.1\|2934163_2934481_-	hypothetical protein	NA	NA	NA	NA
WP_074160392.1\|2934575_2934803_+	hypothetical protein	NA	NA	NA	NA
WP_029884072.1\|2934905_2935409_+	hypothetical protein	NA	NA	NA	NA
WP_058842809.1\|2935503_2938944_+	tape measure protein	Q5G8W8	Enterobacteria_phage	7.3e-133	40.5
WP_040181302.1\|2938984_2939164_+	hypothetical protein	NA	NA	NA	NA
WP_071854269.1\|2939183_2939597_-	hypothetical protein	G0ZNE8	Cronobacter_phage	5.0e-65	89.8
WP_016531189.1\|2939767_2940187_+	hypothetical protein	A0A2P1MXB5	Escherichia_phage	1.8e-30	47.8
WP_004196571.1\|2940186_2940657_+	hypothetical protein	R9TPR6	Aeromonas_phage	1.2e-27	40.4
WP_040181295.1\|2940653_2941049_+	hypothetical protein	F1C5F2	Cronobacter_phage	4.7e-36	54.8
WP_109027958.1\|2941035_2943513_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	3.0e-197	45.3
WP_071854268.1\|2945598_2946399_+	hypothetical protein	NA	NA	NA	NA
WP_040181289.1\|2946504_2946744_+	hypothetical protein	K7P7N3	Enterobacteria_phage	4.2e-16	51.9
2947216:2947262	attR	NA	NA	NA	NA

DBSCAN-SWA_3

3428338 : 3437812

Dickeya_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|3428338_3429454_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|3429450_3431391_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|3431467_3431689_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|3432014_3432332_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|3432362_3434642_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|3434772_3434991_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_023302126.1\|3435344_3436046_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_023302125.1\|3436090_3437812_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3

DBSCAN-SWA_4

3676830 : 3746446

Enterobacteria_phage(51.43%)

tRNA,head,tail,terminase,integrase,portal,capsid,plate

attL 3704026:3704043|attR 3741202:3741219

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004150803.1\|3676830_3677937_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004150802.1\|3677993_3678452_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004150801.1\|3678468_3679119_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150800.1\|3679359_3680610_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_004213085.1\|3680882_3681596_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004150798.1\|3681592_3681985_-	amino acid-binding protein	NA	NA	NA	NA
WP_004150797.1\|3681977_3682301_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_048263900.1\|3682389_3682596_-	hypothetical protein	NA	NA	NA	NA
WP_019704434.1\|3682543_3682729_+	hypothetical protein	NA	NA	NA	NA
WP_004140530.1\|3682749_3682977_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004140529.1\|3683089_3684283_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_137013050.1\|3684498_3684687_-	hypothetical protein	NA	NA	NA	NA
WP_004150795.1\|3684906_3685092_+	general stress protein	NA	NA	NA	NA
WP_004148027.1\|3685182_3685677_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004140514.1\|3685703_3686210_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004179357.1\|3686226_3687114_+	manganese catalase family protein	NA	NA	NA	NA
WP_004140511.1\|3687169_3688576_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004183659.1\|3688572_3689583_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140506.1\|3689698_3689896_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3690462_3691095_+	DNA-binding protein	NA	NA	NA	NA
WP_032409986.1\|3691134_3691314_+	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|3691711_3692398_+	EAL domain-containing protein	NA	NA	NA	NA
WP_023302066.1\|3692708_3694217_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_021313530.1\|3694337_3695228_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023302065.1\|3695234_3697019_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004140494.1\|3697092_3698301_-	HD domain-containing protein	NA	NA	NA	NA
WP_004150784.1\|3698603_3699647_+	type II asparaginase	NA	NA	NA	NA
WP_023302064.1\|3700308_3701223_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150783.1\|3701312_3701951_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004140489.1\|3702081_3702345_+	DUF2534 family protein	NA	NA	NA	NA
WP_004140488.1\|3702404_3702530_-	hypothetical protein	NA	NA	NA	NA
WP_004892898.1\|3702647_3702722_-	protein YoaJ	NA	NA	NA	NA
WP_004150782.1\|3702721_3702823_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_004176549.1\|3702880_3703894_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
3704026:3704043	attL	NA	NA	NA	NA
WP_040181453.1\|3704158_3705142_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	1.4e-150	79.8
WP_004213095.1\|3705257_3705557_-	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	6.5e-38	77.8
WP_020806130.1\|3705677_3705956_+	regulatory protein Cox	Q1JS60	Enterobacteria_phage	6.2e-43	88.9
WP_004216643.1\|3705976_3706195_+	hypothetical protein	A0A0M5M1I3	Salmonella_phage	3.6e-06	49.1
WP_040181449.1\|3706210_3706588_+	hypothetical protein	NA	NA	NA	NA
WP_023329526.1\|3706603_3706876_+	hypothetical protein	NA	NA	NA	NA
WP_004213098.1\|3706944_3707169_+	hypothetical protein	NA	NA	NA	NA
WP_023329528.1\|3707165_3707732_+	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	2.8e-13	33.2
WP_046623557.1\|3707740_3707968_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	2.5e-05	41.0
WP_040181444.1\|3707964_3708921_+	DNA adenine methylase	A0A0M4QWR0	Salmonella_phage	1.5e-83	54.4
WP_109027967.1\|3711810_3714081_-	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_040181440.1\|3714080_3714872_-	hypothetical protein	NA	NA	NA	NA
WP_048289843.1\|3715716_3716778_-\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	9.1e-143	68.1
WP_040181438.1\|3716771_3718499_-	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	1.0e-228	67.1
WP_040181436.1\|3718655_3719495_+\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	4.3e-95	66.3
WP_023328071.1\|3719504_3720539_+\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.6e-96	50.0
WP_040181433.1\|3720588_3721446_+\|terminase	terminase	A0A0A7NPX9	Enterobacteria_phage	9.8e-71	61.3
WP_040181431.1\|3721558_3722074_+\|head	head completion/stabilization protein	A0A0A7NPU2	Enterobacteria_phage	2.7e-39	48.8
WP_004131559.1\|3722073_3722274_+\|tail	tail protein	A0A0A7NV57	Enterobacteria_phage	1.6e-16	63.1
WP_004213110.1\|3722264_3722549_+	hypothetical protein	NA	NA	NA	NA
WP_023339943.1\|3722545_3723091_+	lysozyme	Q1I0Z1	Pasteurella_virus	6.3e-31	43.0
WP_031593580.1\|3723102_3723432_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_040181428.1\|3723613_3724081_+\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	4.5e-46	58.8
WP_020316957.1\|3724077_3724713_+	phage virion morphogenesis protein	A0A0A7NV60	Enterobacteria_phage	4.6e-57	51.9
WP_009486481.1\|3724709_3725297_+\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	6.9e-60	60.5
WP_040181426.1\|3725293_3725644_+\|plate	baseplate assembly protein	A0A0A7NQ90	Enterobacteria_phage	1.8e-23	58.2
WP_023300878.1\|3725645_3726569_+	hypothetical protein	A0A0A7NPY5	Enterobacteria_phage	7.6e-53	43.6
WP_040181424.1\|3726558_3729585_+\|tail	phage tail protein I	D5LGZ2	Escherichia_phage	6.4e-24	40.7
WP_023339950.1\|3729581_3729794_+	hypothetical protein	NA	NA	NA	NA
WP_040181419.1\|3729793_3730891_+\|tail	tail fiber protein	G4KKN6	Yersinia_phage	5.2e-08	47.8
WP_052450975.1\|3731490_3732714_+	DUF262 domain-containing protein	A0A1V0S9I8	Catovirus	7.8e-05	27.5
WP_040181417.1\|3732731_3733394_+	hypothetical protein	NA	NA	NA	NA
WP_040181415.1\|3733857_3734331_-\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.6e-53	66.9
WP_040181412.1\|3734346_3737322_-\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	2.0e-219	46.4
WP_075604421.1\|3737308_3737467_-\|tail	GpE family phage tail protein	A0A0A7NQ96	Enterobacteria_phage	3.5e-11	63.3
WP_004131585.1\|3737466_3737784_-	hypothetical protein	B9A7B2	Serratia_phage	1.0e-17	54.8
WP_004216461.1\|3737829_3738345_-\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	2.2e-57	61.2
WP_040181409.1\|3738344_3739517_-\|tail	phage tail sheath family protein	A0A0A7NV69	Enterobacteria_phage	5.0e-158	70.7
WP_040181406.1\|3739671_3740811_+	phage late control D family protein	B9A7A9	Serratia_phage	9.4e-146	72.3
WP_004213128.1\|3740854_3741106_+	ogr/Delta-like zinc finger family protein	A0A2I8TV89	Erwinia_phage	3.4e-08	49.2
WP_004176548.1\|3741370_3741610_+	DUF333 domain-containing protein	NA	NA	NA	NA
3741202:3741219	attR	NA	NA	NA	NA
WP_004150779.1\|3741599_3741956_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_020802835.1\|3741942_3742452_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004140471.1\|3742597_3743290_+	CTP synthase	NA	NA	NA	NA
WP_004148041.1\|3743321_3744506_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_002901073.1\|3744607_3745399_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901080.1\|3745382_3745829_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_004892876.1\|3745945_3746446_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_5

4126884 : 4137772

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|4126884_4127505_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_032423485.1\|4127497_4128763_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.3
WP_109027984.1\|4128774_4129677_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.9e-159	99.3
WP_023148136.1\|4129714_4129948_-	hypothetical protein	NA	NA	NA	NA
WP_002210513.1\|4129938_4130700_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_001620095.1\|4130720_4131581_-	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_004176262.1\|4131878_4132139_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_040182017.1\|4132225_4133314_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.8e-210	99.7
WP_004176258.1\|4133344_4134610_-	MFS transporter	NA	NA	NA	NA
WP_040182019.1\|4134664_4137772_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_6

4795218 : 4880459

102

Salmonella_phage(26.15%)

tRNA,head,tail,terminase,lysis,integrase,transposase,plate

attL 4844240:4844257|attR 4882272:4882289

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148053328.1\|4795218_4796265_-\|transposase	IS481 family transposase	A0A0M3LR35	Mannheimia_phage	3.5e-06	23.2
WP_004891138.1\|4796542_4797391_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_002910403.1\|4797390_4798473_-	peptide chain release factor 1	W8EDB3	Pseudomonas_phage	1.9e-07	41.6
WP_004891136.1\|4798515_4799772_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_002910405.1\|4800042_4800654_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_004891134.1\|4800650_4801502_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002910407.1\|4801685_4802633_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	2.3e-44	37.5
WP_004189412.1\|4802757_4804437_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	1.0e-23	23.4
WP_023301802.1\|4804438_4805485_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002910437.1\|4805705_4805981_-	stress-induced protein YchH	NA	NA	NA	NA
WP_009307591.1\|4806253_4806838_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910443.1\|4806955_4808047_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_004145442.1\|4808127_4808457_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|4808540_4809455_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_048289900.1\|4809586_4811002_-	membrane protein	NA	NA	NA	NA
WP_004152261.1\|4811021_4811465_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_019704158.1\|4811467_4812010_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_002910494.1\|4811984_4813031_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_040181246.1\|4813030_4814794_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_029498250.1\|4814927_4817894_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_040181245.1\|4818358_4819570_-	hypothetical protein	NA	NA	NA	NA
WP_029499423.1\|4819574_4819832_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_032413757.1\|4819857_4820265_-	hypothetical protein	NA	NA	NA	NA
WP_123618886.1\|4820757_4821393_-	hypothetical protein	NA	NA	NA	NA
WP_023342696.1\|4821668_4823696_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JIA8	uncultured_Caudovirales_phage	2.6e-74	31.6
WP_009307584.1\|4823698_4826326_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.3e-17	31.5
WP_009307583.1\|4826784_4828482_-	OmpA family protein	NA	NA	NA	NA
WP_004175498.1\|4828485_4829139_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_009307582.1\|4829135_4830476_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004156898.1\|4830523_4830703_+	hypothetical protein	NA	NA	NA	NA
WP_002910650.1\|4831041_4831371_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_004899028.1\|4831440_4832025_+	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_002910654.1\|4832050_4832749_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	2.6e-05	27.2
WP_048289904.1\|4832940_4833423_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_074422971.1\|4834397_4834604_-	hypothetical protein	K7PGV5	Enterobacterial_phage	1.9e-09	49.2
WP_040181289.1\|4834713_4834953_-	hypothetical protein	K7P7N3	Enterobacteria_phage	4.2e-16	51.9
WP_074422970.1\|4835058_4835859_-	hypothetical protein	NA	NA	NA	NA
WP_065802545.1\|4835868_4837899_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	1.2e-23	27.3
WP_004152577.1\|4837955_4838153_-	hypothetical protein	NA	NA	NA	NA
WP_065802524.1\|4838152_4839019_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.4e-32	64.4
WP_065802522.1\|4839018_4839792_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	5.7e-78	54.8
WP_065802521.1\|4839788_4840985_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.9e-161	74.6
WP_048289810.1\|4840984_4841338_-	bacteriophage protein	A0A2H4J629	uncultured_Caudovirales_phage	3.0e-50	78.6
WP_065802519.1\|4841334_4841991_-	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	6.5e-83	64.0
WP_127429055.1\|4842319_4843045_-	hypothetical protein	NA	NA	NA	NA
WP_065802515.1\|4843049_4844117_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	2.7e-134	67.8
WP_065802513.1\|4844119_4844422_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.8e-25	52.1
4844240:4844257	attL	NA	NA	NA	NA
WP_065802512.1\|4844422_4844998_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	1.7e-66	71.2
WP_109027950.1\|4844997_4846995_-	lytic transglycosylase domain-containing protein	A0A0M4REK7	Salmonella_phage	4.0e-232	62.1
WP_065802507.1\|4846984_4847137_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	1.0e-15	76.0
WP_065802505.1\|4847178_4847598_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	3.0e-41	66.7
WP_023312781.1\|4847601_4848045_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	2.1e-61	80.0
WP_065802503.1\|4848054_4849200_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.3e-166	77.7
WP_004152176.1\|4849203_4849644_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_065519890.1\|4849738_4850125_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	5.8e-47	75.8
WP_064151821.1\|4850124_4850739_-	hypothetical protein	NA	NA	NA	NA
WP_065802501.1\|4850735_4851155_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.4e-40	60.7
WP_040181209.1\|4851123_4851405_-	hypothetical protein	NA	NA	NA	NA
WP_065802499.1\|4851444_4852386_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	2.3e-137	77.1
WP_040181205.1\|4852397_4852892_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	2.1e-49	61.5
WP_040181203.1\|4852895_4854098_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	5.3e-107	52.8
WP_025714258.1\|4854107_4854302_-	hypothetical protein	NA	NA	NA	NA
WP_025714257.1\|4854347_4854896_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	1.0e-49	56.9
WP_039108763.1\|4854951_4856403_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	7.2e-191	68.4
WP_040181195.1\|4856640_4858041_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	7.2e-188	69.2
WP_065802497.1\|4857991_4858768_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	2.4e-12	66.0
WP_109027951.1\|4858976_4859444_-\|lysis	lysis protein	Q76H63	Enterobacteria_phage	2.8e-56	72.9
WP_040181191.1\|4859440_4859944_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	5.0e-75	78.4
WP_012967717.1\|4859946_4860261_-	hypothetical protein	H6WRZ3	Salmonella_phage	8.3e-44	86.1
WP_040181186.1\|4861087_4861897_-	antitermination protein	M9NZB0	Enterobacteria_phage	1.9e-116	75.1
WP_040181184.1\|4861893_4862034_-	YlcG family protein	NA	NA	NA	NA
WP_065802495.1\|4862030_4862669_-	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	68.4
WP_049089532.1\|4862661_4862832_-	NinE family protein	G8C7V4	Escherichia_phage	3.7e-14	71.4
WP_064151812.1\|4862837_4863434_-	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	4.7e-56	53.8
WP_039108781.1\|4863591_4863840_-	hypothetical protein	NA	NA	NA	NA
WP_087750241.1\|4863839_4864253_-	DUF551 domain-containing protein	A0A077SK54	Escherichia_phage	1.1e-11	34.6
WP_004141386.1\|4864881_4865094_-	hypothetical protein	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	8.1e-11	45.5
WP_040181701.1\|4865625_4865886_-	DUF4752 family protein	T1S9K2	Salmonella_phage	1.6e-29	75.6
WP_109027952.1\|4865882_4866299_-	hypothetical protein	A0A220NRQ7	Escherichia_phage	2.2e-15	62.0
WP_109027953.1\|4866295_4866520_-	hypothetical protein	H9C169	Pectobacterium_phage	9.2e-13	53.4
WP_109027954.1\|4866516_4866810_-	protein ren	M1FPD5	Enterobacteria_phage	2.1e-25	62.4
WP_109027955.1\|4866806_4867655_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	7.1e-90	60.8
WP_109027956.1\|4867651_4868512_-	replication protein	K7PGT1	Enterobacteria_phage	2.1e-60	50.5
WP_004141720.1\|4868842_4869163_-	hypothetical protein	A0A0M4RU01	Salmonella_phage	3.8e-36	68.9
WP_023284762.1\|4869212_4869428_-	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	4.2e-15	60.9
WP_029602664.1\|4869527_4870160_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.2e-33	40.0
WP_008807814.1\|4870783_4870990_+	phage encoded cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	1.4e-31	94.1
WP_040181687.1\|4871070_4871355_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	4.3e-39	78.7
WP_040181685.1\|4871370_4872216_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	2.6e-68	58.8
WP_129693859.1\|4872212_4872833_+	hypothetical protein	A0A076GAP8	Staphylococcus_phage	5.5e-23	43.8
WP_040181683.1\|4872825_4873512_+	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	4.8e-113	90.6
WP_016529279.1\|4873508_4873667_+	DUF1317 family protein	A0A0N7CHV0	Escherichia_phage	6.7e-10	58.8
WP_024264482.1\|4873663_4874191_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	1.3e-57	62.2
WP_040181679.1\|4874187_4874958_+	hypothetical protein	D5LH17	Escherichia_phage	3.2e-65	51.0
WP_065802489.1\|4875174_4875939_+	hypothetical protein	Q71T76	Escherichia_phage	3.0e-71	58.3
WP_040218332.1\|4875935_4876127_+	DUF1382 family protein	G9L698	Escherichia_phage	1.3e-12	64.4
WP_032431536.1\|4876123_4876333_+	hypothetical protein	NA	NA	NA	NA
WP_009483816.1\|4876329_4876548_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.6e-12	52.2
WP_040181674.1\|4876551_4876797_+	excisionase family protein	A0A286S2A4	Klebsiella_phage	1.9e-35	92.1
WP_021312745.1\|4876839_4878102_+\|integrase	site-specific integrase	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
WP_032413763.1\|4878342_4879149_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004175494.1\|4879163_4880459_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.6e-62	36.8
4882272:4882289	attR	NA	NA	NA	NA

DBSCAN-SWA_7

5032778 : 5076745

Klebsiella_phage(47.17%)

head,protease,tail,terminase,integrase,transposase,portal,holin,capsid

attL 5037717:5037776|attR 5076856:5076920

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040181715.1\|5032778_5033273_-	very short patch repair endonuclease	E5E3X5	Burkholderia_phage	2.8e-30	50.7
WP_009484430.1\|5033253_5034687_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	4.0e-101	53.0
WP_009307518.1\|5034730_5035438_-	phosphohydrolase	S4W232	Pandoravirus	3.7e-07	27.3
WP_004151461.1\|5035480_5035762_-	hypothetical protein	NA	NA	NA	NA
WP_004148893.1\|5035642_5035909_+	hypothetical protein	NA	NA	NA	NA
WP_002911596.1\|5036300_5037446_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.1e-117	58.7
5037717:5037776	attL	NA	NA	NA	NA
WP_074376103.1\|5038051_5038423_-	hypothetical protein	K7PGV5	Enterobacterial_phage	9.2e-26	51.9
WP_064172351.1\|5038379_5038601_-	hypothetical protein	I6PD82	Cronobacter_phage	2.1e-17	50.6
WP_000343760.1\|5038661_5039882_-\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA
WP_001333465.1\|5040584_5041007_-	hypothetical protein	K7P834	Enterobacteria_phage	2.8e-26	45.3
WP_074177881.1\|5041084_5041267_-	helix-turn-helix domain-containing protein	A0A286S1P7	Klebsiella_phage	1.5e-18	88.9
WP_040181868.1\|5041278_5042079_-	hypothetical protein	NA	NA	NA	NA
WP_058842797.1\|5044124_5047184_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	91.0
WP_017880229.1\|5047180_5047561_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	4.6e-73	100.0
WP_032412796.1\|5047570_5048053_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.6e-83	96.9
WP_004899614.1\|5048039_5048519_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.7e-93	98.7
WP_058842798.1\|5048518_5051065_-\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	74.6
WP_058842799.1\|5051126_5051504_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_004899621.1\|5051567_5051831_-	hypothetical protein	A0A286S1P2	Klebsiella_phage	7.9e-40	90.8
WP_004899623.1\|5051833_5052217_-	hypothetical protein	A0A286S1N4	Klebsiella_phage	1.4e-53	86.3
WP_000115125.1\|5052260_5052752_-	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
WP_000561415.1\|5052808_5053174_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.9e-61	92.6
WP_000763233.1\|5053170_5053710_-	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	1.0e-94	100.0
WP_004184710.1\|5053702_5054035_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	3.1e-57	100.0
WP_004143899.1\|5054036_5054234_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
WP_017880223.1\|5054294_5054621_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
WP_044067369.1\|5054568_5054811_-	hypothetical protein	NA	NA	NA	NA
WP_058842800.1\|5054847_5056011_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	3.1e-213	100.0
WP_077254200.1\|5056022_5056703_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	6.0e-124	99.6
WP_017880221.1\|5056708_5057986_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	6.2e-247	100.0
WP_004143904.1\|5057988_5059521_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	3.9e-296	100.0
WP_004143905.1\|5059530_5059965_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
WP_017880219.1\|5060086_5060296_-	hypothetical protein	A0A286N2R4	Klebsiella_phage	7.0e-31	100.0
WP_017880218.1\|5060308_5060599_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	1.4e-53	99.0
WP_023301206.1\|5060670_5060877_-	DUF551 domain-containing protein	A0A286N2R2	Klebsiella_phage	5.1e-34	97.1
WP_004216876.1\|5060948_5061194_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.0e-33	96.3
WP_032426434.1\|5061258_5061459_-	hypothetical protein	K7PHC3	Enterobacterial_phage	7.9e-16	65.1
WP_032420712.1\|5061490_5061682_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	3.2e-22	88.1
WP_020317342.1\|5061632_5061908_-	hypothetical protein	G8C7W1	Escherichia_phage	1.4e-15	52.8
WP_058842802.1\|5061915_5062545_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	1.7e-104	89.0
WP_019705280.1\|5062544_5062826_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.9e-37	80.6
WP_017145563.1\|5062812_5063208_-	membrane protein	K7PHB9	Enterobacterial_phage	2.6e-63	98.5
WP_032416155.1\|5063770_5064217_+	hypothetical protein	NA	NA	NA	NA
WP_031281242.1\|5064122_5064380_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	2.8e-42	98.8
WP_004899672.1\|5064692_5065271_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.6e-51	57.2
WP_058842803.1\|5065284_5066265_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.4e-134	66.9
WP_000779146.1\|5066277_5066655_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
WP_049026353.1\|5066664_5067474_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.0e-109	69.3
WP_058842804.1\|5067470_5068385_-	transcriptional regulator	H2DE83	Erwinia_phage	1.4e-30	60.6
WP_004213338.1\|5068789_5069251_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.7e-69	88.2
WP_001191665.1\|5069285_5069528_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
WP_023317570.1\|5069625_5070321_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.5e-87	71.3
WP_101516289.1\|5071114_5072032_+	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	2.6e-45	36.2
WP_065954001.1\|5072121_5072421_+	hypothetical protein	K7PJS4	Enterobacterial_phage	5.5e-13	46.7
WP_101516288.1\|5072420_5073206_+	hypothetical protein	C7BGF1	Burkholderia_phage	3.8e-61	51.8
WP_101516287.1\|5073333_5073795_+	hypothetical protein	R9TME7	Aeromonas_phage	4.0e-10	35.5
WP_101516286.1\|5073791_5073998_+	hypothetical protein	R9TRD3	Aeromonas_phage	2.1e-32	98.5
WP_101516285.1\|5073994_5074471_+	hypothetical protein	A0A077SLK5	Escherichia_phage	3.8e-16	50.0
WP_142368272.1\|5075012_5075216_+	hypothetical protein	NA	NA	NA	NA
WP_101516283.1\|5075212_5075491_+	hypothetical protein	NA	NA	NA	NA
WP_032408630.1\|5075523_5075751_+	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	2.4e-29	78.4
WP_101516282.1\|5075752_5076745_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	8.4e-175	87.2
5076856:5076920	attR	NA	NA	NA	NA

DBSCAN-SWA_8

5190385 : 5197290

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004149058.1\|5190385_5191864_+	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3
WP_004175198.1\|5191860_5192583_+	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004144192.1\|5192901_5194263_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_002912636.1\|5194508_5195402_+	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004180550.1\|5195642_5196416_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004175147.1\|5196426_5197290_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP041928

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP041930

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP041929

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP041927

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection