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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042986 Histophilus somni strain UOC-KLM-ATR-07 chromosome, complete genome 0 crisprs cas14j,DEDDh,DinG,cas3 0 0 146 0

Results visualization

1. NZ_CP042986
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 29835 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41072 : 45367 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 48879 : 52238 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60044 : 60425 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 74751 : 77807 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 80878 : 87691 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 103972 : 104902 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123362 : 129936 6 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_9 138551 : 143187 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150233 : 151154 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 162300 : 174582 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 178104 : 193249 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 204054 : 205500 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 208823 : 213810 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 217932 : 223992 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 228139 : 236360 9 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 245498 : 311696 73 Haemophilus_phage(39.02%) head,tRNA,plate,terminase,tail NA
DBSCAN-SWA_18 314876 : 319566 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_19 323774 : 327841 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_20 346342 : 350956 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 362224 : 363337 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 388298 : 397832 8 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 405575 : 407579 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 424360 : 431109 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 434448 : 437251 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 443299 : 445156 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 450882 : 454658 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 465162 : 466626 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 471149 : 475465 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 481846 : 482110 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 488096 : 491615 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 500649 : 501947 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 506191 : 508156 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 511178 : 511661 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 522416 : 529687 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 541546 : 545173 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 548830 : 549598 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 557353 : 558862 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 567311 : 568319 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 575424 : 584955 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 610470 : 620156 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 627774 : 629289 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 635376 : 636670 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 641881 : 650075 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 657939 : 662878 5 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 667326 : 671785 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 675465 : 679201 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 683692 : 685672 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 693596 : 697585 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 703130 : 704555 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 727102 : 737381 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 742065 : 745540 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_53 756264 : 762528 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 781088 : 781736 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 816546 : 820628 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 832993 : 838069 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 844472 : 846302 1 Ostreococcus_tauri_virus(100.0%) protease NA
DBSCAN-SWA_58 850226 : 858603 7 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_59 863415 : 864261 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 876239 : 878171 2 Pseudomonas_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_61 884684 : 886202 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 890613 : 892104 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_63 902537 : 903587 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_64 912814 : 913831 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_65 936529 : 940814 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_66 948112 : 955570 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_67 966151 : 968620 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_68 974526 : 979360 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_69 983177 : 985673 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_70 992473 : 992815 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_71 996473 : 996947 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1007468 : 1010554 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_73 1015696 : 1035141 20 Tupanvirus(12.5%) protease,tRNA NA
DBSCAN-SWA_74 1043866 : 1046761 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_75 1053780 : 1054200 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 1057216 : 1057759 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_77 1064273 : 1069451 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_78 1079660 : 1090925 4 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1101899 : 1118167 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_80 1122480 : 1124505 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_81 1136662 : 1152257 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_82 1160299 : 1167456 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_83 1173422 : 1173707 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_84 1182667 : 1183393 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_85 1190777 : 1194692 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_86 1198725 : 1199673 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_87 1204249 : 1205698 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_88 1214036 : 1214681 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_89 1240665 : 1242414 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1245812 : 1247776 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_91 1252566 : 1258610 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_92 1262872 : 1263523 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1270085 : 1272282 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_94 1298998 : 1305257 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_95 1311327 : 1314393 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_96 1330930 : 1332893 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_97 1339257 : 1341903 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_98 1347834 : 1354188 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_99 1368424 : 1369726 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_100 1373742 : 1384145 8 Staphylococcus_phage(50.0%) integrase attL 1378359:1378389|attR 1380284:1380314
DBSCAN-SWA_101 1391149 : 1404144 5 Ostreococcus_lucimarinus_virus(33.33%) NA NA
DBSCAN-SWA_102 1415871 : 1420055 5 Burkholderia_phage(40.0%) NA NA
DBSCAN-SWA_103 1424277 : 1430851 5 Escherichia_phage(66.67%) integrase attL 1418797:1418811|attR 1426680:1426694
DBSCAN-SWA_104 1438208 : 1438778 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_105 1443766 : 1444423 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_106 1447497 : 1449678 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_107 1457147 : 1459559 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_108 1464834 : 1469259 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_109 1481378 : 1484087 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_110 1487945 : 1506705 16 Ostreococcus_lucimarinus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_111 1510019 : 1511426 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_112 1520283 : 1521618 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_113 1546686 : 1550560 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_114 1558029 : 1567342 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_115 1574493 : 1581896 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_116 1587632 : 1649432 59 Escherichia_phage(14.29%) protease,integrase,tRNA,transposase attL 1599754:1599770|attR 1642686:1642702
DBSCAN-SWA_117 1659705 : 1666464 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_118 1675781 : 1676417 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_119 1680006 : 1683190 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_120 1687384 : 1690330 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_121 1694044 : 1747751 53 Mannheimia_phage(40.74%) protease,transposase,capsid,terminase,integrase attL 1714077:1714094|attR 1743586:1743603
DBSCAN-SWA_122 1757333 : 1759022 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_123 1763042 : 1769883 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_124 1775844 : 1777681 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_125 1807275 : 1811862 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_126 1823692 : 1824700 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_127 1842322 : 1843060 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_128 1847672 : 1850939 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_129 1860894 : 1862412 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_130 1871765 : 1878717 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_131 1885672 : 1886422 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_132 1899315 : 1899576 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_133 1904764 : 1905718 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_134 1910005 : 1929374 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_135 1942601 : 1943861 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_136 1948022 : 1948253 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_137 1961016 : 1974661 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_138 1980274 : 1988262 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_139 2007799 : 2012606 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_140 2035205 : 2036714 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_141 2048858 : 2050399 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_142 2053851 : 2055611 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_143 2059234 : 2060725 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_144 2072937 : 2073981 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_145 2077930 : 2091061 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_146 2106617 : 2108492 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage