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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042985 Histophilus somni strain UOC-KLM-ATR-06 chromosome, complete genome 0 crisprs cas14j,DEDDh,DinG,cas3 0 0 145 0

Results visualization

1. NZ_CP042985
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 29835 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41072 : 45367 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 48880 : 52239 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60045 : 60426 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 74752 : 77808 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 80877 : 87690 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 103965 : 104895 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123360 : 129934 6 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_9 138549 : 143185 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150231 : 151152 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 162298 : 174580 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 178102 : 193247 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 204052 : 205498 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 208821 : 213808 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 217930 : 223990 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 228137 : 236359 8 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 245497 : 311693 73 Haemophilus_phage(39.02%) head,terminase,tail,plate,tRNA NA
DBSCAN-SWA_18 314873 : 319563 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_19 323770 : 327837 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_20 346340 : 350954 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 362222 : 363335 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 388296 : 397830 8 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 405573 : 407577 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 424358 : 431107 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 434446 : 437249 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 443297 : 445154 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 450880 : 454656 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 465160 : 466624 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 471147 : 475463 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 481843 : 482107 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 488092 : 491611 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 500645 : 501943 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 506187 : 508152 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 511174 : 511657 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 522412 : 529683 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 541543 : 545170 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 548827 : 549595 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 557350 : 558859 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 567308 : 568316 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 575421 : 584952 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 610470 : 620156 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 627774 : 629289 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 635374 : 636668 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 641879 : 650073 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 659040 : 662889 4 Synechococcus_phage(66.67%) NA NA
DBSCAN-SWA_46 667337 : 671796 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 675476 : 679212 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 683703 : 685683 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 693607 : 697596 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 703141 : 704566 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 727113 : 737392 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 742076 : 745551 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_53 756275 : 762539 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 781099 : 781747 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 816557 : 820639 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 833004 : 838080 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 844483 : 858614 10 Ostreococcus_tauri_virus(20.0%) tRNA,protease,holin NA
DBSCAN-SWA_58 863426 : 864272 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_59 876250 : 878182 2 Pseudomonas_phage(50.0%) tRNA,protease NA
DBSCAN-SWA_60 884695 : 886213 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_61 890624 : 892115 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 902548 : 903598 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_63 912825 : 913842 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_64 936546 : 940832 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_65 948130 : 955588 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_66 966169 : 968638 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_67 974544 : 979378 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_68 983195 : 985691 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_69 992491 : 992833 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_70 996491 : 996965 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_71 1007486 : 1010572 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_72 1015714 : 1035159 20 Tupanvirus(12.5%) tRNA,protease NA
DBSCAN-SWA_73 1043884 : 1046779 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_74 1053798 : 1054218 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_75 1057234 : 1057777 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_76 1064291 : 1069469 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_77 1079678 : 1090942 5 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_78 1101916 : 1118184 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_79 1122497 : 1124522 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 1136679 : 1152274 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_81 1160316 : 1167473 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_82 1173439 : 1173724 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_83 1182684 : 1183410 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_84 1190794 : 1194709 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_85 1198742 : 1199690 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_86 1204266 : 1205715 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_87 1214053 : 1214698 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_88 1240682 : 1242431 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_89 1245829 : 1247793 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_90 1252583 : 1258627 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_91 1262889 : 1263540 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_92 1270102 : 1272299 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_93 1299016 : 1305275 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_94 1311345 : 1314411 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_95 1330948 : 1332911 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_96 1339275 : 1341921 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_97 1347852 : 1354206 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_98 1368442 : 1369744 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_99 1373760 : 1384162 9 Staphylococcus_phage(42.86%) integrase attL 1378377:1378407|attR 1380302:1380332
DBSCAN-SWA_100 1391166 : 1404161 5 Ostreococcus_lucimarinus_virus(33.33%) NA NA
DBSCAN-SWA_101 1415887 : 1420071 5 Burkholderia_phage(40.0%) NA NA
DBSCAN-SWA_102 1424291 : 1430866 5 Escherichia_phage(66.67%) integrase attL 1418813:1418827|attR 1426695:1426709
DBSCAN-SWA_103 1438223 : 1438793 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_104 1443781 : 1444438 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_105 1447512 : 1449693 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_106 1457164 : 1459576 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_107 1464851 : 1469276 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_108 1481394 : 1484103 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_109 1487961 : 1506721 16 Ostreococcus_lucimarinus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_110 1510035 : 1511442 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_111 1520299 : 1521634 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_112 1546700 : 1550574 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_113 1558043 : 1567356 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_114 1574509 : 1581912 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_115 1587648 : 1649446 59 Escherichia_phage(14.29%) transposase,tRNA,protease,integrase attL 1599770:1599786|attR 1642702:1642718
DBSCAN-SWA_116 1659719 : 1666478 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_117 1675795 : 1676431 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_118 1680020 : 1683204 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_119 1687398 : 1690344 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_120 1694058 : 1747767 55 Mannheimia_phage(41.38%) transposase,integrase,terminase,protease,capsid attL 1714091:1714108|attR 1743602:1743619
DBSCAN-SWA_121 1757348 : 1759037 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_122 1763055 : 1769896 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_123 1775857 : 1777694 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_124 1807288 : 1811875 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_125 1823709 : 1824717 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_126 1842339 : 1843077 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_127 1847689 : 1850956 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_128 1860911 : 1862429 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_129 1871782 : 1878734 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_130 1885689 : 1886439 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_131 1899332 : 1899593 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_132 1904781 : 1905735 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_133 1910022 : 1929391 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_134 1942616 : 1943876 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_135 1948037 : 1948268 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_136 1961031 : 1974676 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_137 1980289 : 1988277 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_138 2007814 : 2012621 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_139 2035220 : 2036729 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_140 2048873 : 2050414 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_141 2053866 : 2055626 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_142 2059249 : 2060740 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_143 2072952 : 2073996 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_144 2077945 : 2091076 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_145 2106632 : 2108507 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage