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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042989 Histophilus somni strain UOC-KLM-ATR-010 chromosome, complete genome 0 crisprs cas14j,DEDDh,DinG,cas3 0 0 146 0

Results visualization

1. NZ_CP042989
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 29835 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41072 : 45367 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 48879 : 52238 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60044 : 60425 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 74751 : 77807 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 80876 : 87689 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 103970 : 104900 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123360 : 129934 6 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_9 138549 : 143185 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150231 : 151152 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 162298 : 174580 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 178102 : 193247 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 204052 : 205498 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 208821 : 213808 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 217930 : 223990 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 228137 : 236358 9 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 245496 : 311694 73 Haemophilus_phage(39.02%) tRNA,plate,head,tail,terminase NA
DBSCAN-SWA_18 314874 : 319564 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_19 323772 : 327839 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_20 346340 : 350954 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 362222 : 363335 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 388296 : 397830 8 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 405573 : 407577 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 424358 : 431107 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 434446 : 437249 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 443297 : 445154 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 450880 : 454656 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 465160 : 466624 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 471147 : 475463 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 481846 : 482110 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 488097 : 491616 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 500650 : 501948 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 506192 : 508157 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 511179 : 511662 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 522417 : 529688 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 541547 : 545174 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 548831 : 549599 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 557354 : 558863 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 567312 : 568320 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 575424 : 584955 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 610468 : 620154 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 627772 : 629287 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 635374 : 636668 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 641879 : 650073 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 657937 : 662879 5 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 667327 : 671786 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 675466 : 679202 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 683693 : 685673 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 693597 : 697586 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 703131 : 704556 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 727103 : 737382 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 742066 : 745541 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_53 756265 : 762529 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 781089 : 781737 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 816547 : 820629 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 832994 : 838070 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 844472 : 846302 1 Ostreococcus_tauri_virus(100.0%) protease NA
DBSCAN-SWA_58 850226 : 858603 7 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_59 863415 : 864261 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 876239 : 878171 2 Pseudomonas_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_61 884684 : 886202 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 890613 : 892104 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_63 902537 : 903587 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_64 912814 : 913831 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_65 936535 : 940821 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_66 948119 : 955577 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_67 966157 : 968626 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_68 974532 : 979366 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_69 983183 : 985679 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_70 992479 : 992821 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_71 996479 : 996953 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1007474 : 1010560 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_73 1015702 : 1035147 20 Tupanvirus(12.5%) protease,tRNA NA
DBSCAN-SWA_74 1043872 : 1046767 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_75 1053788 : 1054208 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 1057224 : 1057767 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_77 1064281 : 1069459 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_78 1079668 : 1090932 5 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1101906 : 1118174 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_80 1122487 : 1124512 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_81 1136669 : 1152264 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_82 1160306 : 1167463 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_83 1173429 : 1173714 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_84 1182674 : 1183400 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_85 1190784 : 1194699 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_86 1198732 : 1199680 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_87 1204256 : 1205705 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_88 1214043 : 1214688 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_89 1240672 : 1242421 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1245819 : 1247783 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_91 1252573 : 1258617 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_92 1262879 : 1263530 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1270092 : 1272289 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_94 1299005 : 1305264 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_95 1311334 : 1314400 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_96 1330937 : 1332900 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_97 1339264 : 1341910 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_98 1347841 : 1354195 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_99 1368431 : 1369733 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_100 1373749 : 1384151 9 Staphylococcus_phage(42.86%) integrase attL 1378366:1378396|attR 1380291:1380321
DBSCAN-SWA_101 1391155 : 1404150 5 Ostreococcus_lucimarinus_virus(33.33%) NA NA
DBSCAN-SWA_102 1415879 : 1420063 5 Burkholderia_phage(40.0%) NA NA
DBSCAN-SWA_103 1424285 : 1430859 5 Escherichia_phage(66.67%) integrase attL 1418805:1418819|attR 1426688:1426702
DBSCAN-SWA_104 1438216 : 1438786 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_105 1443774 : 1444431 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_106 1447505 : 1449686 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_107 1457155 : 1459567 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_108 1464842 : 1469267 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_109 1481386 : 1484095 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_110 1487953 : 1506713 16 Ostreococcus_lucimarinus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_111 1510027 : 1511434 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_112 1520291 : 1521626 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_113 1546693 : 1550567 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_114 1558036 : 1567349 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_115 1574500 : 1581903 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_116 1587639 : 1649438 60 Escherichia_phage(14.29%) integrase,protease,transposase,tRNA attL 1599761:1599777|attR 1642693:1642709
DBSCAN-SWA_117 1659711 : 1666470 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_118 1675787 : 1676423 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_119 1680012 : 1683196 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_120 1687390 : 1690336 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_121 1694050 : 1747759 54 Mannheimia_phage(39.29%) protease,transposase,capsid,integrase,terminase attL 1714083:1714100|attR 1743594:1743611
DBSCAN-SWA_122 1757341 : 1759030 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_123 1763049 : 1769890 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_124 1775851 : 1777688 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_125 1807282 : 1811869 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_126 1823700 : 1824708 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_127 1842330 : 1843068 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_128 1847680 : 1850947 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_129 1860902 : 1862420 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_130 1871773 : 1878725 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_131 1885680 : 1886430 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_132 1899323 : 1899584 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_133 1904772 : 1905726 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_134 1910013 : 1929382 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_135 1942608 : 1943868 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_136 1948029 : 1948260 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_137 1961023 : 1974668 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_138 1980281 : 1988269 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_139 2007806 : 2012613 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_140 2035212 : 2036721 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_141 2048865 : 2050406 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_142 2053858 : 2055618 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_143 2059241 : 2060732 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_144 2072944 : 2073988 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_145 2077937 : 2091068 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_146 2106624 : 2108499 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage