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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042988 Histophilus somni strain UOC-KLM-ATR-09 chromosome, complete genome 0 crisprs cas14j,DEDDh,DinG,cas3 0 0 146 0

Results visualization

1. NZ_CP042988
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 29835 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41059 : 45354 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 48866 : 52225 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60031 : 60412 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 74738 : 77794 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 80863 : 87676 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 103952 : 104882 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123345 : 129919 6 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_9 138534 : 143170 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150216 : 151137 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 162283 : 174565 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 178087 : 193232 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 204037 : 205483 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 208806 : 213793 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 217915 : 223975 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 228122 : 236343 9 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 245481 : 311676 72 Haemophilus_phage(37.5%) tail,tRNA,terminase,head,plate NA
DBSCAN-SWA_18 314856 : 319546 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_19 323753 : 327820 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_20 346321 : 350935 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 362203 : 363316 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 388280 : 397814 8 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 405557 : 407561 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 424342 : 431091 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 434430 : 437233 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 443281 : 445138 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 450864 : 454640 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 465144 : 466608 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 471131 : 475447 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 481823 : 482087 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 488070 : 491589 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 500623 : 501921 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 506165 : 508130 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 511152 : 511635 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 522389 : 529660 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 541519 : 545146 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 548803 : 549571 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 557326 : 558835 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 567284 : 568292 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 575397 : 584928 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 610445 : 620131 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 627751 : 629266 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 635352 : 636646 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 641857 : 650051 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 657915 : 662872 5 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 667320 : 671779 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 675459 : 679195 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 683686 : 685666 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 693590 : 697579 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 703124 : 704549 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 727095 : 737374 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 742058 : 745533 2 EBPR_podovirus(50.0%) NA NA
DBSCAN-SWA_53 756257 : 762521 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 781081 : 781729 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 816539 : 820621 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 832986 : 838062 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 844462 : 846292 1 Ostreococcus_tauri_virus(100.0%) protease NA
DBSCAN-SWA_58 850215 : 858592 7 Pandoravirus(33.33%) tRNA NA
DBSCAN-SWA_59 863404 : 864250 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 876230 : 878162 2 Pseudomonas_phage(50.0%) tRNA,protease NA
DBSCAN-SWA_61 884675 : 886193 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 890604 : 892095 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_63 902529 : 903579 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_64 912808 : 913825 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_65 936536 : 940822 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_66 948120 : 955578 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_67 966157 : 968626 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_68 974532 : 979366 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_69 983183 : 985679 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_70 992479 : 992821 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_71 996479 : 996953 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1007474 : 1010560 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_73 1015700 : 1035145 20 Tupanvirus(12.5%) tRNA,protease NA
DBSCAN-SWA_74 1043870 : 1046765 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_75 1053786 : 1054206 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_76 1057222 : 1057765 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_77 1064279 : 1069457 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_78 1079666 : 1090930 5 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1101904 : 1118172 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_80 1122485 : 1124510 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_81 1136667 : 1152262 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_82 1160304 : 1167461 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_83 1173427 : 1173712 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_84 1182672 : 1183398 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_85 1190782 : 1194697 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_86 1198730 : 1199678 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_87 1204254 : 1205703 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_88 1214041 : 1214686 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_89 1240670 : 1242419 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1245817 : 1247781 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_91 1252571 : 1258615 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_92 1262877 : 1263528 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_93 1270090 : 1272287 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_94 1299002 : 1305261 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_95 1311331 : 1314397 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_96 1330934 : 1332897 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_97 1339261 : 1341907 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_98 1347838 : 1354192 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_99 1368428 : 1369730 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_100 1373746 : 1384156 9 Lactococcus_phage(25.0%) integrase attL 1374869:1374904|attR 1380283:1380318
DBSCAN-SWA_101 1391160 : 1404155 5 Ostreococcus_lucimarinus_virus(33.33%) NA NA
DBSCAN-SWA_102 1415881 : 1420065 5 Burkholderia_phage(40.0%) NA NA
DBSCAN-SWA_103 1424285 : 1430860 5 Escherichia_phage(66.67%) integrase attL 1418807:1418821|attR 1426689:1426703
DBSCAN-SWA_104 1438217 : 1438787 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_105 1443775 : 1444432 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_106 1447506 : 1449687 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_107 1457158 : 1459570 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_108 1464845 : 1469270 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_109 1481389 : 1484098 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_110 1487956 : 1506716 16 Ostreococcus_lucimarinus_virus(12.5%) tRNA,transposase NA
DBSCAN-SWA_111 1510030 : 1511437 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_112 1520294 : 1521629 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_113 1546695 : 1550569 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_114 1558038 : 1567351 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_115 1574503 : 1581906 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_116 1587642 : 1649444 60 Escherichia_phage(14.29%) tRNA,integrase,protease,transposase attL 1599764:1599780|attR 1642696:1642712
DBSCAN-SWA_117 1659717 : 1666476 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_118 1675793 : 1676429 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_119 1680018 : 1683202 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_120 1687396 : 1690342 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_121 1694056 : 1747762 54 Mannheimia_phage(42.86%) protease,terminase,capsid,integrase,transposase attL 1714089:1714106|attR 1743597:1743614
DBSCAN-SWA_122 1757343 : 1759032 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_123 1763052 : 1769893 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_124 1775854 : 1777691 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_125 1807285 : 1811872 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_126 1823703 : 1824711 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_127 1842333 : 1843071 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_128 1847682 : 1850949 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_129 1860905 : 1862423 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_130 1871776 : 1878728 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_131 1885683 : 1886433 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_132 1899326 : 1899587 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_133 1904775 : 1905729 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_134 1910016 : 1929385 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_135 1942623 : 1943883 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_136 1948044 : 1948275 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_137 1961038 : 1974683 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_138 1980296 : 1988284 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_139 2007821 : 2012628 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_140 2035230 : 2036739 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_141 2048883 : 2050424 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_142 2053876 : 2055636 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_143 2059259 : 2060750 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_144 2072962 : 2074006 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_145 2077955 : 2091086 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_146 2106642 : 2108517 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage