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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042990 Histophilus somni strain UOC-KLM-ATR-011 chromosome, complete genome 1 crisprs cas14j,DEDDh,DinG,cas3 0 0 145 0

Results visualization

1. NZ_CP042990
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042990_1 359798-359913 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 29835 30 Streptococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_2 41072 : 45367 4 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 48879 : 52238 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 60044 : 60425 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_5 74751 : 77807 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_6 80876 : 87689 7 Prochlorococcus_phage(33.33%) protease NA
DBSCAN-SWA_7 103968 : 104898 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 123359 : 129933 6 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_9 138549 : 143185 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 150231 : 151152 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_11 162297 : 174579 5 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_12 178101 : 193246 14 uncultured_Caudovirales_phage(28.57%) protease NA
DBSCAN-SWA_13 204051 : 205497 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_14 208820 : 213807 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_15 217929 : 223989 5 Enterobacteria_phage(33.33%) tRNA NA
DBSCAN-SWA_16 228136 : 236358 8 uncultured_Caudovirales_phage(20.0%) NA NA
DBSCAN-SWA_17 245496 : 311691 72 Haemophilus_phage(40.0%) tRNA,head,terminase,tail,plate NA
DBSCAN-SWA_18 314871 : 319561 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_19 323768 : 327835 4 Indivirus(33.33%) NA NA
DBSCAN-SWA_20 346334 : 350948 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_21 362220 : 363333 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_22 388294 : 397828 8 Bodo_saltans_virus(25.0%) NA NA
DBSCAN-SWA_23 405582 : 407586 1 Serratia_phage(100.0%) NA NA
DBSCAN-SWA_24 424367 : 431116 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_25 434455 : 437258 2 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_26 443306 : 445163 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_27 450889 : 454665 4 Streptococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_28 465169 : 466633 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_29 471156 : 475472 6 Clostridium_phage(40.0%) NA NA
DBSCAN-SWA_30 481850 : 482111 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 488101 : 491620 3 uncultured_Mediterranean_phage(33.33%) transposase NA
DBSCAN-SWA_32 500654 : 501952 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_33 506196 : 508161 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_34 511183 : 511666 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_35 522421 : 529692 6 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_36 541551 : 545178 2 Enterococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_37 548834 : 549602 1 Pandoravirus(100.0%) tRNA NA
DBSCAN-SWA_38 557357 : 558866 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_39 567315 : 568323 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_40 575428 : 584959 8 Tupanvirus(20.0%) NA NA
DBSCAN-SWA_41 610472 : 620158 10 Enterobacteria_phage(16.67%) tRNA NA
DBSCAN-SWA_42 627776 : 629291 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 635376 : 636670 2 Bradyrhizobium_phage(50.0%) NA NA
DBSCAN-SWA_44 641881 : 650075 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_45 657939 : 662892 5 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_46 667340 : 671799 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_47 675479 : 679215 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_48 683706 : 685686 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_49 693610 : 697599 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 703144 : 704569 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 727116 : 737395 9 Organic_Lake_phycodnavirus(40.0%) NA NA
DBSCAN-SWA_52 742083 : 745558 2 EBPR_podovirus(50.0%) NA NA
DBSCAN-SWA_53 756282 : 762546 5 Vibrio_phage(40.0%) tRNA NA
DBSCAN-SWA_54 781106 : 781754 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_55 816564 : 820646 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_56 833011 : 838087 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_57 844490 : 858620 10 Ostreococcus_tauri_virus(20.0%) holin,protease,tRNA NA
DBSCAN-SWA_58 863432 : 864278 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_59 876258 : 878190 2 Pseudomonas_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_60 884703 : 886221 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_61 890632 : 892123 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_62 902557 : 903607 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_63 912836 : 913853 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_64 936557 : 940843 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_65 948141 : 955599 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_66 966180 : 968649 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_67 974555 : 979389 5 Orpheovirus(33.33%) NA NA
DBSCAN-SWA_68 983206 : 985702 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_69 992502 : 992844 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_70 996502 : 996976 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_71 1007497 : 1010583 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_72 1015725 : 1035170 20 Tupanvirus(12.5%) protease,tRNA NA
DBSCAN-SWA_73 1043895 : 1046790 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_74 1053798 : 1054218 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_75 1057234 : 1057777 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_76 1064291 : 1069469 2 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_77 1079678 : 1090941 4 Escherichia_phage(50.0%) tRNA NA
DBSCAN-SWA_78 1101914 : 1118182 15 Acidithiobacillus_phage(12.5%) NA NA
DBSCAN-SWA_79 1122495 : 1124520 1 Brevibacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 1136677 : 1152272 16 Escherichia_phage(14.29%) tRNA NA
DBSCAN-SWA_81 1160314 : 1167471 8 Pseudomonas_phage(40.0%) lysis NA
DBSCAN-SWA_82 1173437 : 1173722 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_83 1182682 : 1183408 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_84 1190792 : 1194707 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_85 1198740 : 1199688 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_86 1204264 : 1205713 1 Erwinia_phage(100.0%) NA NA
DBSCAN-SWA_87 1214052 : 1214697 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_88 1240681 : 1242430 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_89 1245828 : 1247792 2 unidentified_phage(50.0%) NA NA
DBSCAN-SWA_90 1252582 : 1258626 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_91 1262888 : 1263539 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_92 1270101 : 1272298 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_93 1299014 : 1305273 5 Moraxella_phage(33.33%) tRNA NA
DBSCAN-SWA_94 1311343 : 1314409 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_95 1330946 : 1332909 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_96 1339273 : 1341919 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_97 1347850 : 1354204 7 Bacillus_virus(25.0%) tRNA NA
DBSCAN-SWA_98 1368440 : 1369742 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_99 1373758 : 1384161 8 Staphylococcus_phage(42.86%) integrase attL 1378375:1378405|attR 1380301:1380331
DBSCAN-SWA_100 1391165 : 1395122 4 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_101 1415885 : 1420076 5 Burkholderia_phage(40.0%) NA NA
DBSCAN-SWA_102 1424293 : 1430867 5 Escherichia_phage(66.67%) integrase attL 1418818:1418832|attR 1426696:1426710
DBSCAN-SWA_103 1438224 : 1438794 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_104 1443784 : 1444441 1 Acaryochloris_phage(100.0%) NA NA
DBSCAN-SWA_105 1447515 : 1449696 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_106 1457163 : 1459575 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_107 1464850 : 1469275 7 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_108 1481394 : 1484103 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_109 1487961 : 1506721 16 Ostreococcus_lucimarinus_virus(12.5%) transposase,tRNA NA
DBSCAN-SWA_110 1510035 : 1511442 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_111 1520299 : 1521634 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_112 1546702 : 1550576 4 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_113 1558045 : 1567358 9 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_114 1574510 : 1581913 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_115 1587649 : 1649451 59 Escherichia_phage(14.29%) integrase,protease,transposase,tRNA attL 1599771:1599787|attR 1642704:1642720
DBSCAN-SWA_116 1659724 : 1666483 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_117 1675798 : 1676434 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_118 1680023 : 1683207 3 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_119 1687401 : 1690347 3 Mannheimia_phage(33.33%) NA NA
DBSCAN-SWA_120 1694061 : 1747773 54 Mannheimia_phage(42.86%) protease,capsid,terminase,integrase,transposase attL 1714096:1714113|attR 1743608:1743625
DBSCAN-SWA_121 1757354 : 1759043 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_122 1763062 : 1769903 7 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_123 1775864 : 1777701 2 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_124 1807295 : 1811882 5 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_125 1823713 : 1824721 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_126 1842343 : 1843081 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_127 1847693 : 1850960 3 Indivirus(50.0%) tRNA NA
DBSCAN-SWA_128 1860916 : 1862434 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_129 1871787 : 1878739 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_130 1885694 : 1886444 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_131 1899337 : 1899598 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_132 1904786 : 1905740 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_133 1910027 : 1929397 14 Enterobacteria_phage(11.11%) tRNA NA
DBSCAN-SWA_134 1942621 : 1943881 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_135 1948042 : 1948273 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_136 1961045 : 1974690 16 Lactococcus_phage(16.67%) NA NA
DBSCAN-SWA_137 1980303 : 1988291 10 Clostridium_phage(20.0%) NA NA
DBSCAN-SWA_138 2007828 : 2012635 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_139 2035234 : 2036743 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_140 2048887 : 2050428 2 Synechococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_141 2053880 : 2055640 2 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_142 2059263 : 2060754 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_143 2072966 : 2074010 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_144 2077959 : 2091090 13 Escherichia_phage(57.14%) NA NA
DBSCAN-SWA_145 2106645 : 2108520 1 Catovirus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage