CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043046	Pigmentiphaga aceris strain Mada1488 chromosome, complete genome	2 crisprs	DEDDh,cas3,PD-DExK,WYL,csa3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	1	27	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043046_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043046_1

4345846-4347340

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCATACGCGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGCATACGCGGGGAACAC	CRT
CGGTTCATCCCCGCATACGCGGGGAACAC	PILER-CR

24 spacers

cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP043046_1

>merge|NZ_CP043046|1|4345846-4347340|CRISPRCasFinder,CRT,PILER-CR
CATATCATCCCCGCTGACGCGGGGAAACACGCAGACCAAGCGTGTTAACCAGGCCCGGTTCGGCGGTTCATCCCCGCTCGCGCCGGGAACATGTCAGCTGATTGCCGTCGTAGTAGTCGGCGCACGGCTCATCCCTACTAGCGCGGGGAACACTATGTCTTCGTGCCTGCCAGCAGTGCACGCACCGGTTCATCCCCGCTCACGCGGGGAACACGCGTCGAACAGCGGAGAAACAGCGGCGGTGGGCGGTTCATCCCCGCTCGCGCGGGGAACATTATGCGTCCTTGAACGCCATCCGAGCACCGACCGGTTCATCCTCGCTCGCGCGGGGAACACGGCTGATGTGGGTGTCGATCCTGCCTCGAAGCCGGTTCATCCCCGCATACGCGGGGAACACTGCGCCATCGATTGATTGGTGACGCCGACGGCCGGTTCATCCCCGCATACGCGGGGAACACCAGCGATGGCGACGGACTGACGTTTACCCTGACGGTTCATCCCCGCATACGCGGGGAACACGACCGTCGGAACAGCCAGGGTTCTGGCTACAACGGTTCATCCCCGCATACGCGGGGAACACCACGGCTACTCGCCCGAGGCCGTTCTGATTGGCGGTTCATCCCCGCATACGCGGGGAACACAGATGGCAGCGCCACACACGCCAAAGAAATTGCGGTTCATCCCCGCATACGCGGGGAACACTTTGCTCGGGTATGCCATCAAACATCTCCCTGCGGTTCATCCCCGCATACGCGGGGAACACGCCCACATAGGCACACCAGCCGGGACCACCAACGGTTCATCCCCGCATACGCGGGGAACACGCCTCCGCCCAATAGCGCAGCTATAAGGGTGCCGGTTCATCCCCGCATACGCGGGGAACACTCTTTGTGGCCACGCTGACCGGCGCATAGAGCCGGTTCATCCCCGCATACGCGGGGAACACTCTATGAGCAAATGGCCGCTGCTGCCGCTAGCCGGTTCATCCCCGCATACGCGGGGAACACTTCCGCGAGTGGAACGCGCTGGAGTACGAGAACGGTTCATCCCCGCATACGCGGGGAACACGTCGTGACGCTCGCTTGCAAGTCAGTGACCTGCGGTTCATCCCCGCATACGCGGGGAACACGCACTGGGAGCGCCAGAAGAACCGCGAGGTAACGGTTCATCCCCGCATACGCGGGGAACACCGAGGATCACCAAGGGCGGGGACCAAAAGCTACGGTTCATCCCCGCATACGCGGGGAACACCTCGACGCCGTGATAGAAATCAGTAGTAGCCACGGTTCATCCCCGCATACGCGGGGAACACTAGAGAACATGGCGTCCCTTCCCGCCATTGGGCGGTTCATCCCCGCATACGCGGGGAACACTAAACCCGCCGCCAGCAAGCGAAATCATTGAGCGGTTCATCCCCGCATACGCGGGGAACACGATTTCCGCTCATCGAAGTTATCAGCAAAGTCCGGTTCATCCCCGCATACGCGGGGAACAC

>NZ_CP043046|1|1|4345846-4347340|CRISPRCasFinder
CATATCATCCCCGCTGACGCGGGGAAACA	CGCAGACCAAGCGTGTTAACCAGGCCCGGTTCGG
CGGTTCATCCCCGCTCGCGCCGGGAACAT	GTCAGCTGATTGCCGTCGTAGTAGTCGGCGCA
CGGCTCATCCCTACTAGCGCGGGGAACAC	TATGTCTTCGTGCCTGCCAGCAGTGCACGCAC
CGGTTCATCCCCGCTCACGCGGGGAACAC	GCGTCGAACAGCGGAGAAACAGCGGCGGTGGG
CGGTTCATCCCCGCTCGCGCGGGGAACAT	TATGCGTCCTTGAACGCCATCCGAGCACCGAC
CGGTTCATCCTCGCTCGCGCGGGGAACAC	GGCTGATGTGGGTGTCGATCCTGCCTCGAAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TGCGCCATCGATTGATTGGTGACGCCGACGGC
CGGTTCATCCCCGCATACGCGGGGAACAC	CAGCGATGGCGACGGACTGACGTTTACCCTGA
CGGTTCATCCCCGCATACGCGGGGAACAC	GACCGTCGGAACAGCCAGGGTTCTGGCTACAA
CGGTTCATCCCCGCATACGCGGGGAACAC	CACGGCTACTCGCCCGAGGCCGTTCTGATTGG
CGGTTCATCCCCGCATACGCGGGGAACAC	AGATGGCAGCGCCACACACGCCAAAGAAATTG
CGGTTCATCCCCGCATACGCGGGGAACAC	TTTGCTCGGGTATGCCATCAAACATCTCCCTG
CGGTTCATCCCCGCATACGCGGGGAACAC	GCCCACATAGGCACACCAGCCGGGACCACCAA
CGGTTCATCCCCGCATACGCGGGGAACAC	GCCTCCGCCCAATAGCGCAGCTATAAGGGTGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TCTTTGTGGCCACGCTGACCGGCGCATAGAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TCTATGAGCAAATGGCCGCTGCTGCCGCTAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TTCCGCGAGTGGAACGCGCTGGAGTACGAGAA
CGGTTCATCCCCGCATACGCGGGGAACAC	GTCGTGACGCTCGCTTGCAAGTCAGTGACCTG
CGGTTCATCCCCGCATACGCGGGGAACAC	GCACTGGGAGCGCCAGAAGAACCGCGAGGTAA
CGGTTCATCCCCGCATACGCGGGGAACAC	CGAGGATCACCAAGGGCGGGGACCAAAAGCTA
CGGTTCATCCCCGCATACGCGGGGAACAC	CTCGACGCCGTGATAGAAATCAGTAGTAGCCA
CGGTTCATCCCCGCATACGCGGGGAACAC	TAGAGAACATGGCGTCCCTTCCCGCCATTGGG
CGGTTCATCCCCGCATACGCGGGGAACAC	TAAACCCGCCGCCAGCAAGCGAAATCATTGAG
CGGTTCATCCCCGCATACGCGGGGAACAC	GATTTCCGCTCATCGAAGTTATCAGCAAAGTC
CGGTTCATCCCCGCATACGCGGGGAACAC

>NZ_CP043046|1|1|4345846-4347340|CRT
CATATCATCCCCGCTGACGCGGGGAAACA	CGCAGACCAAGCGTGTTAACCAGGCCCGGTTCGG
CGGTTCATCCCCGCTCGCGCCGGGAACAT	GTCAGCTGATTGCCGTCGTAGTAGTCGGCGCA
CGGCTCATCCCTACTAGCGCGGGGAACAC	TATGTCTTCGTGCCTGCCAGCAGTGCACGCAC
CGGTTCATCCCCGCTCACGCGGGGAACAC	GCGTCGAACAGCGGAGAAACAGCGGCGGTGGG
CGGTTCATCCCCGCTCGCGCGGGGAACAT	TATGCGTCCTTGAACGCCATCCGAGCACCGAC
CGGTTCATCCTCGCTCGCGCGGGGAACAC	GGCTGATGTGGGTGTCGATCCTGCCTCGAAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TGCGCCATCGATTGATTGGTGACGCCGACGGC
CGGTTCATCCCCGCATACGCGGGGAACAC	CAGCGATGGCGACGGACTGACGTTTACCCTGA
CGGTTCATCCCCGCATACGCGGGGAACAC	GACCGTCGGAACAGCCAGGGTTCTGGCTACAA
CGGTTCATCCCCGCATACGCGGGGAACAC	CACGGCTACTCGCCCGAGGCCGTTCTGATTGG
CGGTTCATCCCCGCATACGCGGGGAACAC	AGATGGCAGCGCCACACACGCCAAAGAAATTG
CGGTTCATCCCCGCATACGCGGGGAACAC	TTTGCTCGGGTATGCCATCAAACATCTCCCTG
CGGTTCATCCCCGCATACGCGGGGAACAC	GCCCACATAGGCACACCAGCCGGGACCACCAA
CGGTTCATCCCCGCATACGCGGGGAACAC	GCCTCCGCCCAATAGCGCAGCTATAAGGGTGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TCTTTGTGGCCACGCTGACCGGCGCATAGAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TCTATGAGCAAATGGCCGCTGCTGCCGCTAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TTCCGCGAGTGGAACGCGCTGGAGTACGAGAA
CGGTTCATCCCCGCATACGCGGGGAACAC	GTCGTGACGCTCGCTTGCAAGTCAGTGACCTG
CGGTTCATCCCCGCATACGCGGGGAACAC	GCACTGGGAGCGCCAGAAGAACCGCGAGGTAA
CGGTTCATCCCCGCATACGCGGGGAACAC	CGAGGATCACCAAGGGCGGGGACCAAAAGCTA
CGGTTCATCCCCGCATACGCGGGGAACAC	CTCGACGCCGTGATAGAAATCAGTAGTAGCCA
CGGTTCATCCCCGCATACGCGGGGAACAC	TAGAGAACATGGCGTCCCTTCCCGCCATTGGG
CGGTTCATCCCCGCATACGCGGGGAACAC	TAAACCCGCCGCCAGCAAGCGAAATCATTGAG
CGGTTCATCCCCGCATACGCGGGGAACAC	GATTTCCGCTCATCGAAGTTATCAGCAAAGTC
CGGTTCATCCCCGCATACGCGGGGAACAC

>NZ_CP043046|1|1|4346763-4347340|PILER-CR
CGGTTCATCCCCGCATACGCGGGGAACAC	TCTATGAGCAAATGGCCGCTGCTGCCGCTAGC
CGGTTCATCCCCGCATACGCGGGGAACAC	TTCCGCGAGTGGAACGCGCTGGAGTACGAGAA
CGGTTCATCCCCGCATACGCGGGGAACAC	GTCGTGACGCTCGCTTGCAAGTCAGTGACCTG
CGGTTCATCCCCGCATACGCGGGGAACAC	GCACTGGGAGCGCCAGAAGAACCGCGAGGTAA
CGGTTCATCCCCGCATACGCGGGGAACAC	CGAGGATCACCAAGGGCGGGGACCAAAAGCTA
CGGTTCATCCCCGCATACGCGGGGAACAC	CTCGACGCCGTGATAGAAATCAGTAGTAGCCA
CGGTTCATCCCCGCATACGCGGGGAACAC	TAGAGAACATGGCGTCCCTTCCCGCCATTGGG
CGGTTCATCCCCGCATACGCGGGGAACAC	TAAACCCGCCGCCAGCAAGCGAAATCATTGAG
CGGTTCATCCCCGCATACGCGGGGAACAC	GATTTCCGCTCATCGAAGTTATCAGCAAAGTC
CGGTTCATCCCCGCATACGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043046.1\|WP_148816724.1\|4356641_4358207_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP043046.1\|WP_148816725.1\|4358507_4359872_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|341494
NZ_CP043046.1\|WP_148816720.1\|4353541_4354219_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_CP043046.1\|WP_148816710.1\|4334374_4336216_-\|oligopeptide-ABC-transporter-ATP-binding-protein-OppD	unknown	unknown	gnl\|CDD\|224048
NZ_CP043046.1\|WP_148816716.1\|4342598_4344191_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173882
NZ_CP043046.1\|WP_148816708.1\|4333119_4333323_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043046.1\|WP_148816709.1\|4333502_4334360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043046.1\|WP_148816717.1\|4344208_4345747_+\|amidase	unknown	unknown	gnl\|CDD\|235723
NZ_CP043046.1\|WP_148816718.1\|4347423_4350183_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP043046.1\|WP_148816722.1\|4354987_4356022_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP043046.1\|WP_148816712.1\|4337162_4338158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223674
NZ_CP043046.1\|WP_148816719.1\|4352319_4352625_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043046.1\|WP_148816711.1\|4336217_4337147_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224094
NZ_CP043046.1\|WP_148816721.1\|4354215_4354983_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP043046.1\|WP_148816714.1\|4339868_4340900_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP043046.1\|WP_148819551.1\|4352624_4353512_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP043046.1\|WP_148816726.1\|4359868_4360162_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP043046.1\|WP_148816715.1\|4341388_4342573_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|238527
NZ_CP043046.1\|WP_148816723.1\|4356018_4356645_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043046.1\|WP_148816713.1\|4338199_4339864_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173882

Protein	Function_ID	Function_description	E-value
NZ_CP043046.1\|WP_148816724.1\|4356641_4358207_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.37692e-130
NZ_CP043046.1\|WP_148816725.1\|4358507_4359872_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|341494	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins. This family contains type II toxin-antitoxin (TA) system HipA family toxins similar to Shewanella oneidensis HipA, a serine/threonine-protein kinase that phosphorylates Glu-tRNA-ligase (GltX), preventing it from being charged, leading to an increase in uncharged tRNA(Glu). This induces amino acid starvation and the stringent response via RelA/SpoT and increased (p)ppGpp levels, which inhibits replication, transcription, translation and cell wall synthesis, reducing growth and leading to persistence and multidrug resistance. HipA is the toxin component of the HipA-HipB TA module that is a major factor in persistence and bioflim formation; its toxic effect is neutralized by its cognate antitoxin HipB. HipA, with HipB, acts as a a corepressor for transcription of the hipBA promoter. In the Shewanella oneidensis HipAB:DNA promoter complex, HipB forms a dimer that binds the duplex operator DNA, with each HipB monomer interacting with separate HipA monomers. The HipAB component of the complex is composed of two HipA and two HipB subunits.	2.56501e-152
NZ_CP043046.1\|WP_148816710.1\|4334374_4336216_-\|oligopeptide-ABC-transporter-ATP-binding-protein-OppD	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP043046.1\|WP_148816716.1\|4342598_4344191_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173882	cd08517, PBP2_NikA_DppA_OppA_like_13, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP043046.1\|WP_148816720.1\|4353541_4354219_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.03083e-47
NZ_CP043046.1\|WP_148816717.1\|4344208_4345747_+\|amidase	gnl\|CDD\|235723	PRK06170, PRK06170, amidase; Provisional.	2.13702e-161
NZ_CP043046.1\|WP_148816718.1\|4347423_4350183_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.03172e-135
NZ_CP043046.1\|WP_148816722.1\|4354987_4356022_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.55985e-113
NZ_CP043046.1\|WP_148816712.1\|4337162_4338158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.41938e-113
NZ_CP043046.1\|WP_148816719.1\|4352319_4352625_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	6.61371e-58
NZ_CP043046.1\|WP_148816711.1\|4336217_4337147_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.0485e-90
NZ_CP043046.1\|WP_148816721.1\|4354215_4354983_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.45336e-42
NZ_CP043046.1\|WP_148816714.1\|4339868_4340900_-\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	2.16114e-147
NZ_CP043046.1\|WP_148819551.1\|4352624_4353512_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.87995e-150
NZ_CP043046.1\|WP_148816726.1\|4359868_4360162_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.48707e-09
NZ_CP043046.1\|WP_148816715.1\|4341388_4342573_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|238527	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).	6.87784e-78
NZ_CP043046.1\|WP_148816723.1\|4356018_4356645_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.02315e-19
NZ_CP043046.1\|WP_148816713.1\|4338199_4339864_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173882	cd08517, PBP2_NikA_DppA_OppA_like_13, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP043046.1|WP_148816717.1|4344208_4345747_+|amidase
MTHALDIAADIIAPDRSADLPALVFAPAHEQARALAEGRVSAVELLAYTLARIDRLNPVINAVIVRDDTSAYAAARAADAALARGERKPLLGVPITFKENFDVAGLVTSVGDPAWADNRAQVDAPAVTALREAGAVVIGKTNVPLALADLQSFNAIYGTTNNPWNLAHTPGGSSGGSAAAVAAGFSALDLGTDIGGSIRIPAHFTGTFGHKPSYGLVYNGGLGVPPGKQSLRDLSVAGPLARSAQDLELALTLLLNRDPQANKTWRAELPAPRQHRLRDFRVLLLTQWPGQDRSESEQWVHDRLVAVVQAAGITPLTIEDLPDGLWPDLPATHRLYRSLLTATRPAPRPDTPHAKAEAQALREGSDDSDEIAGRRGPHLTHGEWLEKNEARMQLRQRWSRIFEHIDLVLTPNLVTTAFRHDPNPPKQTRTIPVSYADGVRQLGFFELFNWAGLPVLPGLPATAFPLGLDALGLPVGAQAIGPFLEDLTPIRFAHLLQQAGLSQFVVPPGFAG
>NZ_CP043046.1|WP_148816716.1|4342598_4344191_+|ABC-transporter-substrate-binding-protein
MTNTTWARAFALAVPLMLWNASTSAQASPQAPVRGGTFTYAMAQEPTTLVSFLDTKTDNRNVSAKVTEGLLRYDLKFKPQPLLATAWEVSADGLRYTFTLRKGVKFHDGSDFTSADVRYSILKQKELGPRGRITFANVQAVETPDAHTAVISLAKPAPYLINALSSAETPIVPHQRYGDASPLAHANTNQPIGTGPFVFKEWVKGSHVVLEKNPSYWREGYPYVDRVIFRFIKNAASISAAIEAGEVNAALNVAIADIDRLAKDPKLAVDDTYDAFLNNALFLEFNHNNPILANQKVRYAIAHAIDRNFIANTVYYRRAQVVNSPIPAILTDYYDDSTFNYTVDAAKANALLDEAGYPRKDGQTRFELRLSFLPSADFKRASEYIRASLNRLGIKVEIVDGDLPTFLNRVYKERGFDLNVNGLGRLFDPTVGVQRIYWSDAIKNPIPWVNASHYNNARVDELFRAAAVETDATKRAAQFKEIQQTVGRELPVLPLVTVPSALQVYQKRVHQLNNNVELTAGDWSDLWIAP
>NZ_CP043046.1|WP_148816715.1|4341388_4342573_+|LLM-class-flavin-dependent-oxidoreductase
MSVIESAESSARLDHPVSPSDFPDSPYSQALKQPVLLGLFLPIQAGGWSASTLPRTTDWSWEYNRDLVLHAEALGFDLVFALSQWLPKGGYGGVFDGNALDSFQTTAALTSITKRILLVSTIHVLYGPMHPLHLAKWGATLDHISGGRWGINLVTGHRAVEHEAFGWNRIEHDKRYALADEFAQVLQRLWSDDEPYSFEGESSWKLKNAFVTPKPRYGRPLLVNATGSDAGIAFAARHSDIVFITSPGASDFASAIQVLPAHAQRVKQAARDQGREIRTLLNPMVISRASEAETRDYYNAIVAHQDFRTPEGFQALDSDAHAWKGRAGIDPPSRRAIGGNIEVVGTPEQVVEQFIQLKRAGIDGLQLSFFDFKPDLEFFGEHILPLMKQAGLRF
>NZ_CP043046.1|WP_148816714.1|4339868_4340900_-|aldo/keto-reductase
MSHRYLGRSALQVSRLALGTMMFGGPTDEATSHEIIARAKASGVNFIDTADVYQKGKTEEVVGRAIRGDRDDWVLATKFGNPLGEGPNRRGSSRKWIIESVENSLRRLGTDYLDILYFHRADFNAPLGEAVRAIGDLVRSGKIRYFGVSNFTGWRLAEVAYLADAESIDRPVASQPLYNLVNRTAEVEQLPAAHAFGVGVVSYSPLARGVLTAKYDSVDAPAEGSRAARKDKRLLETEWRQESVDIARVIREHIAARGIDPVAFALGWVLNNRLITSAIAGPRTVEQWDGYAKALDYVFTPEDEALVNRLVVAGHSSTPGYTDPGHPVEGRVARVLAAATVKE
>NZ_CP043046.1|WP_148816713.1|4338199_4339864_-|ABC-transporter-substrate-binding-protein
MRLNTNLSSHAVLKTIGQRTSRFLLNAAVATLGLSLSLGAVAQTASTTAAPVPTDAAKRGGTLTWIVTPEPAAFVPLTTTAGGSTDLGPKVVEGLFNFDVKLQPIPALATAWQVTPDGLRYTFTLRKGVKWHDGKDFSAADVVFSIETLKTVHPRGRVTFANVRSIEAPDAHTVILLLDKPAPYLLTALDGAESPIIPKHLYEGKDIASNPLNNAPIGTGPFVFKEWVRGSYVKLERNPNYWDQPRPYLDAIVARFIPDAAARAAALESGEVQLGNKVIPLSDIERFKALPKITVDITAWPYVGDHQQIYFNLDSEPFKRREVRLAVAQALNLDVFAKTIWYGHGVPSATPIGAASPFHNPAIKRYPYDVKAAEAALDAAGYKRGADGKRFAVRLLNNPFQDRRAADFVRQSLIRIGIDAELQTLDFATYVTRVYTDRAFDITLENLTNVFDPTIGVQRVFWSKNFKVGLPFSNAPHYVSADADRLLEAAAGEADAARRRALFFEFQEVIHRDIPSIELGANPNVTIAARNLHDWGVNAGGVRANLARAYFSKP
>NZ_CP043046.1|WP_148816712.1|4337162_4338158_-|ABC-transporter-permease-subunit
MSNNATWARIGGTLRRNAWQAVPTILGIIVLNFVLMELVPGDAADVIAAEAGSATAESMAQLRAHFGLDLPMLRRLWDYLSGLVFLDLGVSPRHNTEVTTLIFGRLGNTLLLMGTALGVAVLSGVLIGVLMSLKAGKWQDRVLSVLALLLYSTPGFWLGLMAIVLFSVKLGWLPTGGDHSIGAGLTGWPAVIDGARHLVLPALATAGFFVAIFSRLTRASMLEVNRQDYVRTAESKGLSPAAITFRHVLRNALIPVTTVAGMHFGALLGGATVIETVFSWPGLGRLALESVLARDYSVLLGILFMASLLVIVVNMLVDLLHAWLDPRIQIR
>NZ_CP043046.1|WP_148816711.1|4336217_4337147_-|ABC-transporter-permease-subunit
MTRQAVLGWRPWRTAASKAVAAQPVTGALAAPSRHTAWKALLRNPSAMAGLLILSAFVGLALFANVIFPGDPLDMVTEPLLWPGQDSTALLGSDSLGRNVAAGVAHGARVSLAVGAVAALISLTIGVLVGASAGYFGGWVDDLLVRLTELIQTIPTFLLVIVIVAIGQPSVRVIVLAIGLASWPVIARLVRAEFRALRESEFVLAARSQGFSDAWIIFKEILPNALPPVVVTTSVLVATSILQESALSFLGMGDPNIVSWGSMIGEGREMLRTAWFLTAVPGIAIILSVLSLNLLGDGLNDALNPRSRG
>NZ_CP043046.1|WP_148816710.1|4334374_4336216_-|oligopeptide-ABC-transporter-ATP-binding-protein-OppD
MTTLKQPANTYAANAGDGRRSTTAAPLLDVRALNVHFQGRGHAHHAVRDLNFSVERGETLALVGESGCGKSTTALSILRLLGPQAKMGGELRFQGRDILSLDTLALRALRGRDISMIFQEPMTSLNPVHTVGAQIIETLRLHQGLSYEAARKRTLDMLELVRIPEPQRRIDDYPHNLSGGQRQRVMIAMAVACQPKLLIADEPTTALDVTVQARILELLDQLRRDLSMGLLLITHDLGVVSQWADRVLVMFDGQKVEEGPARQVFEQPRHAYARGLLGASLHAGKEVHYSAGLLPEIHRLADSQGEGQGFRLVTPTLRAGVVKGAVKDGANRPATAANASPASASPTETDKASPLLSVQSLRTSYPKRDGGVFHAVDNVSFDIARGETVGLVGESGCGKSSLSRTLMRLIPSSAGKIVFDGTDLAALKERQVKPWRRHIQMVFQDPYASLNPRRNVHDTLDAVLAVHGERDKRERARQISQTLDRVGLPAAAASRYPHEFSGGQRQRIGIARALIVRPSLLILDEPVSALDVSIQAQILNLLVELKHDFGLSYLFISHDLSVVRYIADRVLVMHGGQIVEQGDHQSIWQSPQHDYTRSLIAAVPKPLPVMQAA
>NZ_CP043046.1|WP_148816709.1|4333502_4334360_+|hypothetical-protein
MKKLLFLIALAVCVLIGAYLIFKRHDPAQDAPRKIEVGMRMTVNDLIERNRLDMGPRVPQGYVIDVDKLGDVMPMYFDDNWITLHLLDGDQIFDLPPGRTLQISQNAGRVIGLSFRPFAQPRPLSDMQAYVTDLIASLERKGWQRTSSSKIPAGPEDFDVGAKSVFGAMRSPSGSELTMTLRDYGLAPKHESFIIVPDPTHKPAQRSQTYLLEIDVGDGRTEGYAELVYPRRIFETGDKNHALPLRRWIEAPDWTPEKAGMVPTTAEERAKPDASDWKMPPISQR
>NZ_CP043046.1|WP_148816708.1|4333119_4333323_-|hypothetical-protein
MKSGVFVMKAATQPEVQSAVGAQDSTATREAKATSGFVSRKNVDLKPLKQVGYRVWRYLSWMTKLTK
>NZ_CP043046.1|WP_148816718.1|4347423_4350183_-|CRISPR-associated-helicase-Cas3'
MTAPPRPSYYAYWGKAMPVSQSDSSRYHLLAYHSLEVAAAGSRIVDLPAFSLHDFAQDLGWPLKTVAALHRFFLAIHDLGKFARAFQRLVPGMSADLVPVVASKRYDERHDTLGWLLWRDYLAQDFDGQPLPNPDDYFWADWARICTGHHGVPPKETSTSGAWALDPDDFFCTADIDAARAFYVEAARLLIRTDIPTPDEASLVVLKKHAWRLAGTAVLADWLGSDQRAFAYQSQPVALDEYWDRTALPVAKKVVQAAGVGAEPIRDWSSPFKLFDYLASPTPLQQLAATMPLGSGPQLFLLEDVTGAGKTEAALMLAYRLMSANLAHGLYFGLPTMATANQMYQRVGSVYRRLYEDDASPSLVLAHGARQLVDAFRESVLYAHAQSGDADYRHDDTSASSQCAAWLADSRKKSLLAHVGVGTLDQALLSVLPVRHQSLRLLGLASKVLLVDEVHAYDPYMRALLAKLLAAHASQGGSAILLSATLANDMRAELVQAFQAGKGNQGEPLAADLRYPLVTHVHDTTQTYACETRSSLVRQVAVRCLHDEDAVITLIREQAAAGKSVCWIRNTVGDARAAYAKLSSDMHASTLTLFHSRYAMGDRLDIEDSVLARFGKTSTAAMRRSQVLVATQVVEQSLDLDFDVLISDLAPIDLLIQRAGRLHRHTRAADGEPSAHEQRPEPVLHILAPVWTTTPRQDWYSLTFPRGRYVYPNVGNLWLTQRALVNAGRIVSPGEPGQIGGVRTLVEAVYGDAAEEIPDALQKATSAYMGVVMAEGAQARFNALRMENGYCVESSHHWYEDTQVPTRLGEATVKIFLCRDTGSELQAWRNDGAFAWEQSAVTVDARHIEALSPAWSQRFGTQIDALRARHRLLEAPALLLPLVAADGRWQAETVRADGKVVWAVYDAVIGLVFEAVGKG
>NZ_CP043046.1|WP_148816719.1|4352319_4352625_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSFVVVVTENVPPRLRGRMAIWLLEVRAGVYIGDVSTRTREMLWEQLVAGHESGNVVMAWASSHESGYEFQTLGENRRFPVEFDGLQLVSFEPLQDSEKDA
>NZ_CP043046.1|WP_148819551.1|4352624_4353512_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MKDRVSMIFIQYGQIDVLDGAFVVIDQTGVRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWIGEAGVRLYASGQPGGARADRLLYQAKLALDDDLRLKVVRKMYEIRFQEPAPARRSVEQLRGIEGARVRETYKLLARQYGVDWQSRNYDRQQWDVADIPNRCLSAATSCLYGITEAAVLAAGYAPAVGFIHTGKPLSFVYDVADLFKFDTVVPLAFKIAAKPAGNPERQVRLACRDMFRSTKLLAKIIPAIEEVLAAGEISPPEAPPESVPPAIPNASSIGDVGHRAQ
>NZ_CP043046.1|WP_148816720.1|4353541_4354219_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSHYFSRAQLLDRPLDMALLASLSRHGDAYRDHALVWRLFPGDNEQRDFLFRRELDARGKAFYYVVSARAPIAEAGLLAVQSKPYAPVFESGDWVRFDLRANPTVARRDAAGGKSRRHDVLMEAKRQGASLPEASRNDLITERSLAWLSSRGEDWGLEFQEESVLTTAYTQHRLHHKKRSIEFSSFDYQGLAQVTDPARLAAKLVGGVGHARAFGCGLLLVKRVS
>NZ_CP043046.1|WP_148816721.1|4354215_4354983_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MADYLVMRLYGPLASWGEIAVGESRHSAVHPSKSALIGLLGAALGIKRDDDTGQATLIAGYRFGVKLVSVGTPLRDYHTIQAPEQQRKIRYRTRRQELADPTRVGTLLSAREYRCDSIALVAVEALSGAPASLSALDHALRHPVFPLYLGRKSCPLAVPLSPQQVGGVTLRSALDDTPQYSLFSLLNTTGEHAWPTREDRIGFRLSAARYYWESGMDAGMEASFHTDRHDQPLSRLRWQFAPRQESVFLAAEESR
>NZ_CP043046.1|WP_148816722.1|4354987_4356022_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTRFVQLHLLTSYPPANLNRDDTGNPKTARVGGVERLRISSQSLKRAWRTSEIFQQHLAGNIGTRTKRLGREAYEAFLKAGIAEKQATEWASQIASVYGTTKKESPLDIEQLVHVAPEERASLNQLIANVIADKRAPTESELKGLLHVQHAVDIAMFGRMLAGKNQFNAEAAVQVAHAIGVHASVVEDDYFTAVDDLNNDDSGAGHVGEAGFAAAVFYQYICIDRDRLKENLGGDETLTKQALGALTEAAATVGPTGKQNSFASRARAHYVLAEKGSQQPRSLSLAFVKPVTGIDYAKDAIDALTTVRNNMDKVYGACSDAHLDIDVLAGKGTLAALIDFVATE
>NZ_CP043046.1|WP_148816723.1|4356018_4356645_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MKHRYLNDAQASWVRAWWAAIHPQEQGSPAIHPGLLGLGRGARAALKRCAGVDELIVEASTNRLASGLMKIEADKQFKHFADDYAAVALVAGAVAAVRDDVRDGRSLAAQLGGDDAKLSELRFLRLMRTSDVDDFYRQLKRAIQLAGNKADVVALANDVIAWCVEQRQPVQDPNHKLKSRWARDYYLPARDRAVVEKSIESTSAEIRS
>NZ_CP043046.1|WP_148816724.1|4356641_4358207_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNTLCDPFLDVRTRDGDECRIRAVDVWRPDIYDLISPRPDFRAALFQYLIGVLQLSFAPAKLSDWKKYWDAPPTEAQLKAAFEPYLHAFELDTDKPAFMQDVDLLSDSEASPIAALLIESPGENTTKKNLDHFVHRGAVNGMCPTCAATALFTLQINAPSGGAGHRVSVRGGGPLTTLLMPRNPAATLWQKLWLNVIPKDWLGYPELADLSSVLPWMGPTRTSDPKGVGDTTPENVHPLQAYWSTPRRIRLDFANVQTGHCDLCGQHSETLLTQYRTRNYGTNYNGHWVHPLTPYSFDPKTLPLSIKGQKGGIGYRHWLGLAIGSDDAKPKAARVVEHMNSKQGKLPVKLWCFGYDMDNMKARCWYDSTLPFHNIESEWQLRHFAKAARLAIDVASESASLLGKYVKAARFNRPGDVASDAAVPLSFWQQSEPHFYALLEQLSQVDFDNEAMLAEPYQRWLRDTRKHALGLFDQWVQTAPIEDTNMRRVIQARADLVKWLHASKAMKPLRDIVNTHLKEAV
>NZ_CP043046.1|WP_148816725.1|4358507_4359872_-|type-II-toxin-antitoxin-system-HipA-family-toxin
MTRLAIWLDDAPIGWVGHDPALNLFSFDYAGTWTAAKHAFAISPRLPLKKEPEQSPEKHSAEVRQFFENLLPEGEALDHAAQAYGISKANLVGLMFALGKETAGALRVLMEAGTAEDAADSPPVRAAVSDANQLRRVTQEELSERIRRRAERPFSVWDGKVRLSIAGYQDKIAIYERDSEWFLVEGPRLASTVIVKPVPARPALASLPYNEYFCMQLAQRVGVKAANTRVATVPEPVLLVSRFDRLERADRVERLHLIDGCQALGLPVSMKYERPYGDGVDVRNIRDGVTYAKLFDLIARFSMQPAIDKLALLQWVIFQVLIGNTDAHGKNLSFFVNAAGLTLAPAYDMVCVPALDDAQLGNTYAMAIGDAFTADALSAFEWASFAKDNGLSGALVGRQIKLLADLVLKALPGVGGDPVVPDAVKHRITEVVQENCARQLAMADMVAQVRAEDL
>NZ_CP043046.1|WP_148816726.1|4359868_4360162_-|helix-turn-helix-domain-containing-protein
MRRVVPLPFPSDPLVQNAADFGAAIRAARTASSMTIADAALLVGVSKQTLADLETARASVGLATAINVARAFGVGVFIAAPEDREIVRRQLLSERTS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP043046_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043046_2

4350279-4352260

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CRT
CGGTTCATCCCCGCTCGCGCGGGGAACAC	PILER-CR

32 spacers

cas3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP043046_2

>merge|NZ_CP043046|2|4350279-4352260|CRISPRCasFinder,CRT,PILER-CR
TAGCTCATCCCCGCATGTGTGGGGAACAAATATAGATGGCAATCGCAGCGCCAATCTAGGCGGTTCATCCCCGCATGCGAGGGGAACGCTCGAACGTGACGCTCTCGGCGTTGGAGATGTATAGTTCATCCCCGCTCACGCGGGGAACACTCAGCCTGCGCCGTGGCGTAGTCGGACCATTGCGGTTCATCCCCGCTCGCGCGGGGAACACGATGACATCACGGTCGCTGCACTGCGCGCGGCCGGTTCATCCCCGCTCACGCGGGGAACACAAGGTCGTTCTAGTCCACCTTGTTTCGGCCTACGGTTCATCCTCGCCTGCGCGGGGAACACCGACGGATGTAGCCAGCGCGTGCGCGCAATCCCGGTTCATCCCCGCCTGCGCGGGGAACACCAATTGCAGCCCGTAGCGATGCCTGGGCAGATCGGTTCATCCCCGCATACGCGGGGAACACGACAACGCCGTGGCCTGCACGCCGTCGACCAACGGTTCATTCCCGCATGCGCGGGGAACACGGCCGAAGTTCTCTGCGTACTGGTCACGAATGCGGTTCATCCTCGCTCGCGCGGGGAACACTACGCGGAACAAATCCGGGCCGAGCAGAAGAGCGGTTCATCCCCGCTCGCGCGGGGAACACTTGGACCACCAGAAACCCTGGTCGAGATCGACCGGTTCATCCCCGCTCGCGCGGGGAACACACCAGACGAATCGCCGCGGCTGCATCTCCGGCCGGTTCATCCCCGCTCGCGCGGGGAACACTCTTCCAACGGGCGAAAAGCAAGTCCCGCTCGCGGTTCATCCCCGCTCGCGCGGGGAACACGTCTCTGCTTGGCGTGGCCCCGCGCATCCTGGTGGTTCATCCCCGCTCGCGCGGGGAACACCGTTTGGTGTCGTTGCGCAGCCGAGCCAAGCGCGGTTCATCCCCGCTCGCGCGGGGAACACGGGTGTAGAGGTGCGCACCAAGACCAACGAATCGGTTCATCCCCGCTCGCGCGGGGAACACTTTTCCGTTCACCTTGAGCCACTGGGGGATATACGGTTCATCCCCGCTCGCGCGGGGAACACCGTATGTGTTCTTTTGCTCATTCCTCATCTCCCGGTTCATCCCCGCTCGCGCGGGGAACACGCGCGCGGGTCAAGGGCGATGCGTAGAAGTGGCGGTTCATCCCCGCTCGCGCGGGGAACACGCCAAGTGGAACGCCTCCCGCAGCTGAACATCCGGTTCATCCCCGCTCGCGCGGGGAACACGACAGGTACGAGCGCACGGCGTGGTCGAGTTCCGGTTCATCCCCGCTCGCGCGGGGAACACGCGACAGTGACCGATGCGCCGGCACTGCCAAGCGGTTCATCCCCGCTCGCGCGGGGAACACGGCTCCTACGCGGGGTGGGTATTCGTGGCTCACGGTTCATCCCCGCTCGCGCGGGGAACACGAGAAAAAACGGGAGTCCAGCCAATGAAGACACGGTTCATCCCCGCTCGCGCGGGGAACACATCCTAGCTGGGCTGCAAGTTGCAACCCAGCACGGTTCATCCCCGCTCGCGCGGGGAACACGACGCTGAGGAAGCTCAGCATGTAGTAGCCAACGGTTCATCCCCGCTCGCGCGGGGAACACGGCGGCTCCTCGGGTCGAGGCAGGAAGTTTTCCGGTTCATCCCCGCTCGCGCGGGGAACACTCAAGGCACCGTGCCTGCCAATCACGGACCGGCGGTTCATCCCCGCTCGCGCGGGGAACACGTGCAAGAAAGCGAAGGAATGTGTGCCTACGCCGGTTCATCCCCGCTCGCGCGGGGAACACTCTTGAATGGCTTTCGGGTTAGCCTTTACCTGCGGTTCATCCCCGCTCGCGCGGGGAACACTCAATCGGAAGACGCCCACGCCAGCATGAACCCCGGTTCATCCCCGCTCGCGCGGGGAACACCCGCCCAGCCCGGACTCATTGAATTCGTAAAGCGGTTCATCCCCGCTCGCGCGGGGAACAC

>NZ_CP043046|2|2|4350279-4352260|CRISPRCasFinder
TAGCTCATCCCCGCATGTGTGGGGAACAA	ATATAGATGGCAATCGCAGCGCCAATCTAGG
CGGTTCATCCCCGCATGCGAGGGGAACGC	TCGAACGTGACGCTCTCGGCGTTGGAGATGTA
TAGTTCATCCCCGCTCACGCGGGGAACAC	TCAGCCTGCGCCGTGGCGTAGTCGGACCATTG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GATGACATCACGGTCGCTGCACTGCGCGCGGC
CGGTTCATCCCCGCTCACGCGGGGAACAC	AAGGTCGTTCTAGTCCACCTTGTTTCGGCCTA
CGGTTCATCCTCGCCTGCGCGGGGAACAC	CGACGGATGTAGCCAGCGCGTGCGCGCAATCC
CGGTTCATCCCCGCCTGCGCGGGGAACAC	CAATTGCAGCCCGTAGCGATGCCTGGGCAGAT
CGGTTCATCCCCGCATACGCGGGGAACAC	GACAACGCCGTGGCCTGCACGCCGTCGACCAA
CGGTTCATTCCCGCATGCGCGGGGAACAC	GGCCGAAGTTCTCTGCGTACTGGTCACGAATG
CGGTTCATCCTCGCTCGCGCGGGGAACAC	TACGCGGAACAAATCCGGGCCGAGCAGAAGAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTGGACCACCAGAAACCCTGGTCGAGATCGAC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ACCAGACGAATCGCCGCGGCTGCATCTCCGGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTCCAACGGGCGAAAAGCAAGTCCCGCTCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTCTCTGCTTGGCGTGGCCCCGCGCATCCTGG
TGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTTTGGTGTCGTTGCGCAGCCGAGCCAAGCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGGTGTAGAGGTGCGCACCAAGACCAACGAAT
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTTTCCGTTCACCTTGAGCCACTGGGGGATATA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTATGTGTTCTTTTGCTCATTCCTCATCTCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGCGCGGGTCAAGGGCGATGCGTAGAAGTGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCCAAGTGGAACGCCTCCCGCAGCTGAACATC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACAGGTACGAGCGCACGGCGTGGTCGAGTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGACAGTGACCGATGCGCCGGCACTGCCAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCTCCTACGCGGGGTGGGTATTCGTGGCTCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GAGAAAAAACGGGAGTCCAGCCAATGAAGACA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ATCCTAGCTGGGCTGCAAGTTGCAACCCAGCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACGCTGAGGAAGCTCAGCATGTAGTAGCCAA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCGGCTCCTCGGGTCGAGGCAGGAAGTTTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAAGGCACCGTGCCTGCCAATCACGGACCGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTGCAAGAAAGCGAAGGAATGTGTGCCTACGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTGAATGGCTTTCGGGTTAGCCTTTACCTG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAATCGGAAGACGCCCACGCCAGCATGAACCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CCGCCCAGCCCGGACTCATTGAATTCGTAAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC

>NZ_CP043046|2|2|4350279-4352260|CRT
TAGCTCATCCCCGCATGTGTGGGGAACAA	ATATAGATGGCAATCGCAGCGCCAATCTAGG
CGGTTCATCCCCGCATGCGAGGGGAACGC	TCGAACGTGACGCTCTCGGCGTTGGAGATGTA
TAGTTCATCCCCGCTCACGCGGGGAACAC	TCAGCCTGCGCCGTGGCGTAGTCGGACCATTG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GATGACATCACGGTCGCTGCACTGCGCGCGGC
CGGTTCATCCCCGCTCACGCGGGGAACAC	AAGGTCGTTCTAGTCCACCTTGTTTCGGCCTA
CGGTTCATCCTCGCCTGCGCGGGGAACAC	CGACGGATGTAGCCAGCGCGTGCGCGCAATCC
CGGTTCATCCCCGCCTGCGCGGGGAACAC	CAATTGCAGCCCGTAGCGATGCCTGGGCAGAT
CGGTTCATCCCCGCATACGCGGGGAACAC	GACAACGCCGTGGCCTGCACGCCGTCGACCAA
CGGTTCATTCCCGCATGCGCGGGGAACAC	GGCCGAAGTTCTCTGCGTACTGGTCACGAATG
CGGTTCATCCTCGCTCGCGCGGGGAACAC	TACGCGGAACAAATCCGGGCCGAGCAGAAGAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTGGACCACCAGAAACCCTGGTCGAGATCGAC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ACCAGACGAATCGCCGCGGCTGCATCTCCGGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTCCAACGGGCGAAAAGCAAGTCCCGCTCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTCTCTGCTTGGCGTGGCCCCGCGCATCCTGG
TGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTTTGGTGTCGTTGCGCAGCCGAGCCAAGCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGGTGTAGAGGTGCGCACCAAGACCAACGAAT
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTTTCCGTTCACCTTGAGCCACTGGGGGATATA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTATGTGTTCTTTTGCTCATTCCTCATCTCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGCGCGGGTCAAGGGCGATGCGTAGAAGTGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCCAAGTGGAACGCCTCCCGCAGCTGAACATC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACAGGTACGAGCGCACGGCGTGGTCGAGTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGACAGTGACCGATGCGCCGGCACTGCCAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCTCCTACGCGGGGTGGGTATTCGTGGCTCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GAGAAAAAACGGGAGTCCAGCCAATGAAGACA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ATCCTAGCTGGGCTGCAAGTTGCAACCCAGCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACGCTGAGGAAGCTCAGCATGTAGTAGCCAA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCGGCTCCTCGGGTCGAGGCAGGAAGTTTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAAGGCACCGTGCCTGCCAATCACGGACCGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTGCAAGAAAGCGAAGGAATGTGTGCCTACGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTGAATGGCTTTCGGGTTAGCCTTTACCTG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAATCGGAAGACGCCCACGCCAGCATGAACCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CCGCCCAGCCCGGACTCATTGAATTCGTAAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC

>NZ_CP043046|2|2|4350827-4352260|PILER-CR
CGGTTCATCCTCGCTCGCGCGGGGAACAC	TACGCGGAACAAATCCGGGCCGAGCAGAAGAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTGGACCACCAGAAACCCTGGTCGAGATCGAC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ACCAGACGAATCGCCGCGGCTGCATCTCCGGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTCCAACGGGCGAAAAGCAAGTCCCGCTCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTCTCTGCTTGGCGTGGCCCCGCGCATCCTGG
TGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTTTGGTGTCGTTGCGCAGCCGAGCCAAGCG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGGTGTAGAGGTGCGCACCAAGACCAACGAAT
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TTTTCCGTTCACCTTGAGCCACTGGGGGATATA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CGTATGTGTTCTTTTGCTCATTCCTCATCTCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGCGCGGGTCAAGGGCGATGCGTAGAAGTGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCCAAGTGGAACGCCTCCCGCAGCTGAACATC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACAGGTACGAGCGCACGGCGTGGTCGAGTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GCGACAGTGACCGATGCGCCGGCACTGCCAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCTCCTACGCGGGGTGGGTATTCGTGGCTCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GAGAAAAAACGGGAGTCCAGCCAATGAAGACA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	ATCCTAGCTGGGCTGCAAGTTGCAACCCAGCA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GACGCTGAGGAAGCTCAGCATGTAGTAGCCAA
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GGCGGCTCCTCGGGTCGAGGCAGGAAGTTTTC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAAGGCACCGTGCCTGCCAATCACGGACCGG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	GTGCAAGAAAGCGAAGGAATGTGTGCCTACGC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCTTGAATGGCTTTCGGGTTAGCCTTTACCTG
CGGTTCATCCCCGCTCGCGCGGGGAACAC	TCAATCGGAAGACGCCCACGCCAGCATGAACCC
CGGTTCATCCCCGCTCGCGCGGGGAACAC	CCGCCCAGCCCGGACTCATTGAATTCGTAAAG
CGGTTCATCCCCGCTCGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043046.1\|WP_148816724.1\|4356641_4358207_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP043046.1\|WP_148816725.1\|4358507_4359872_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|341494
NZ_CP043046.1\|WP_148816720.1\|4353541_4354219_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_CP043046.1\|WP_148816710.1\|4334374_4336216_-\|oligopeptide-ABC-transporter-ATP-binding-protein-OppD	unknown	unknown	gnl\|CDD\|224048
NZ_CP043046.1\|WP_148816716.1\|4342598_4344191_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173882
NZ_CP043046.1\|WP_148816727.1\|4360416_4361934_+\|gliding-motility-protein	unknown	unknown	unknown
NZ_CP043046.1\|WP_148816709.1\|4333502_4334360_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043046.1\|WP_148816717.1\|4344208_4345747_+\|amidase	unknown	unknown	gnl\|CDD\|235723
NZ_CP043046.1\|WP_148816718.1\|4347423_4350183_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP043046.1\|WP_148816722.1\|4354987_4356022_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP043046.1\|WP_148816712.1\|4337162_4338158_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223674
NZ_CP043046.1\|WP_148816719.1\|4352319_4352625_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043046.1\|WP_148816711.1\|4336217_4337147_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224094
NZ_CP043046.1\|WP_148816721.1\|4354215_4354983_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP043046.1\|WP_148816714.1\|4339868_4340900_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381313
NZ_CP043046.1\|WP_148819551.1\|4352624_4353512_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP043046.1\|WP_148816726.1\|4359868_4360162_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP043046.1\|WP_148816715.1\|4341388_4342573_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|238527
NZ_CP043046.1\|WP_148816723.1\|4356018_4356645_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043046.1\|WP_148816713.1\|4338199_4339864_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173882

Protein	Function_ID	Function_description	E-value
NZ_CP043046.1\|WP_148816724.1\|4356641_4358207_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.37692e-130
NZ_CP043046.1\|WP_148816725.1\|4358507_4359872_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|341494	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins. This family contains type II toxin-antitoxin (TA) system HipA family toxins similar to Shewanella oneidensis HipA, a serine/threonine-protein kinase that phosphorylates Glu-tRNA-ligase (GltX), preventing it from being charged, leading to an increase in uncharged tRNA(Glu). This induces amino acid starvation and the stringent response via RelA/SpoT and increased (p)ppGpp levels, which inhibits replication, transcription, translation and cell wall synthesis, reducing growth and leading to persistence and multidrug resistance. HipA is the toxin component of the HipA-HipB TA module that is a major factor in persistence and bioflim formation; its toxic effect is neutralized by its cognate antitoxin HipB. HipA, with HipB, acts as a a corepressor for transcription of the hipBA promoter. In the Shewanella oneidensis HipAB:DNA promoter complex, HipB forms a dimer that binds the duplex operator DNA, with each HipB monomer interacting with separate HipA monomers. The HipAB component of the complex is composed of two HipA and two HipB subunits.	2.56501e-152
NZ_CP043046.1\|WP_148816710.1\|4334374_4336216_-\|oligopeptide-ABC-transporter-ATP-binding-protein-OppD	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP043046.1\|WP_148816716.1\|4342598_4344191_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173882	cd08517, PBP2_NikA_DppA_OppA_like_13, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP043046.1\|WP_148816720.1\|4353541_4354219_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	2.03083e-47
NZ_CP043046.1\|WP_148816717.1\|4344208_4345747_+\|amidase	gnl\|CDD\|235723	PRK06170, PRK06170, amidase; Provisional.	2.13702e-161
NZ_CP043046.1\|WP_148816718.1\|4347423_4350183_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	3.03172e-135
NZ_CP043046.1\|WP_148816722.1\|4354987_4356022_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.55985e-113
NZ_CP043046.1\|WP_148816712.1\|4337162_4338158_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.41938e-113
NZ_CP043046.1\|WP_148816719.1\|4352319_4352625_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	6.61371e-58
NZ_CP043046.1\|WP_148816711.1\|4336217_4337147_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	8.0485e-90
NZ_CP043046.1\|WP_148816721.1\|4354215_4354983_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.45336e-42
NZ_CP043046.1\|WP_148816714.1\|4339868_4340900_-\|aldo/keto-reductase	gnl\|CDD\|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	2.16114e-147
NZ_CP043046.1\|WP_148819551.1\|4352624_4353512_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.87995e-150
NZ_CP043046.1\|WP_148816726.1\|4359868_4360162_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.48707e-09
NZ_CP043046.1\|WP_148816715.1\|4341388_4342573_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|238527	cd01094, Alkanesulfonate_monoxygenase, Alkanesulfonate monoxygenase is the monoxygenase of a two-component system that catalyzes the conversion of alkanesulfonates to the corresponding aldehyde and sulfite. Alkanesulfonate monoxygenase (SsuD) has an absolute requirement for reduced flavin mononucleotide (FMNH2), which is provided by the NADPH-dependent FMN oxidoreductase (SsuE).	6.87784e-78
NZ_CP043046.1\|WP_148816723.1\|4356018_4356645_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.02315e-19
NZ_CP043046.1\|WP_148816713.1\|4338199_4339864_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173882	cd08517, PBP2_NikA_DppA_OppA_like_13, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0

>NZ_CP043046.1|WP_148816718.1|4347423_4350183_-|CRISPR-associated-helicase-Cas3'
MTAPPRPSYYAYWGKAMPVSQSDSSRYHLLAYHSLEVAAAGSRIVDLPAFSLHDFAQDLGWPLKTVAALHRFFLAIHDLGKFARAFQRLVPGMSADLVPVVASKRYDERHDTLGWLLWRDYLAQDFDGQPLPNPDDYFWADWARICTGHHGVPPKETSTSGAWALDPDDFFCTADIDAARAFYVEAARLLIRTDIPTPDEASLVVLKKHAWRLAGTAVLADWLGSDQRAFAYQSQPVALDEYWDRTALPVAKKVVQAAGVGAEPIRDWSSPFKLFDYLASPTPLQQLAATMPLGSGPQLFLLEDVTGAGKTEAALMLAYRLMSANLAHGLYFGLPTMATANQMYQRVGSVYRRLYEDDASPSLVLAHGARQLVDAFRESVLYAHAQSGDADYRHDDTSASSQCAAWLADSRKKSLLAHVGVGTLDQALLSVLPVRHQSLRLLGLASKVLLVDEVHAYDPYMRALLAKLLAAHASQGGSAILLSATLANDMRAELVQAFQAGKGNQGEPLAADLRYPLVTHVHDTTQTYACETRSSLVRQVAVRCLHDEDAVITLIREQAAAGKSVCWIRNTVGDARAAYAKLSSDMHASTLTLFHSRYAMGDRLDIEDSVLARFGKTSTAAMRRSQVLVATQVVEQSLDLDFDVLISDLAPIDLLIQRAGRLHRHTRAADGEPSAHEQRPEPVLHILAPVWTTTPRQDWYSLTFPRGRYVYPNVGNLWLTQRALVNAGRIVSPGEPGQIGGVRTLVEAVYGDAAEEIPDALQKATSAYMGVVMAEGAQARFNALRMENGYCVESSHHWYEDTQVPTRLGEATVKIFLCRDTGSELQAWRNDGAFAWEQSAVTVDARHIEALSPAWSQRFGTQIDALRARHRLLEAPALLLPLVAADGRWQAETVRADGKVVWAVYDAVIGLVFEAVGKG
>NZ_CP043046.1|WP_148816717.1|4344208_4345747_+|amidase
MTHALDIAADIIAPDRSADLPALVFAPAHEQARALAEGRVSAVELLAYTLARIDRLNPVINAVIVRDDTSAYAAARAADAALARGERKPLLGVPITFKENFDVAGLVTSVGDPAWADNRAQVDAPAVTALREAGAVVIGKTNVPLALADLQSFNAIYGTTNNPWNLAHTPGGSSGGSAAAVAAGFSALDLGTDIGGSIRIPAHFTGTFGHKPSYGLVYNGGLGVPPGKQSLRDLSVAGPLARSAQDLELALTLLLNRDPQANKTWRAELPAPRQHRLRDFRVLLLTQWPGQDRSESEQWVHDRLVAVVQAAGITPLTIEDLPDGLWPDLPATHRLYRSLLTATRPAPRPDTPHAKAEAQALREGSDDSDEIAGRRGPHLTHGEWLEKNEARMQLRQRWSRIFEHIDLVLTPNLVTTAFRHDPNPPKQTRTIPVSYADGVRQLGFFELFNWAGLPVLPGLPATAFPLGLDALGLPVGAQAIGPFLEDLTPIRFAHLLQQAGLSQFVVPPGFAG
>NZ_CP043046.1|WP_148816716.1|4342598_4344191_+|ABC-transporter-substrate-binding-protein
MTNTTWARAFALAVPLMLWNASTSAQASPQAPVRGGTFTYAMAQEPTTLVSFLDTKTDNRNVSAKVTEGLLRYDLKFKPQPLLATAWEVSADGLRYTFTLRKGVKFHDGSDFTSADVRYSILKQKELGPRGRITFANVQAVETPDAHTAVISLAKPAPYLINALSSAETPIVPHQRYGDASPLAHANTNQPIGTGPFVFKEWVKGSHVVLEKNPSYWREGYPYVDRVIFRFIKNAASISAAIEAGEVNAALNVAIADIDRLAKDPKLAVDDTYDAFLNNALFLEFNHNNPILANQKVRYAIAHAIDRNFIANTVYYRRAQVVNSPIPAILTDYYDDSTFNYTVDAAKANALLDEAGYPRKDGQTRFELRLSFLPSADFKRASEYIRASLNRLGIKVEIVDGDLPTFLNRVYKERGFDLNVNGLGRLFDPTVGVQRIYWSDAIKNPIPWVNASHYNNARVDELFRAAAVETDATKRAAQFKEIQQTVGRELPVLPLVTVPSALQVYQKRVHQLNNNVELTAGDWSDLWIAP
>NZ_CP043046.1|WP_148816715.1|4341388_4342573_+|LLM-class-flavin-dependent-oxidoreductase
MSVIESAESSARLDHPVSPSDFPDSPYSQALKQPVLLGLFLPIQAGGWSASTLPRTTDWSWEYNRDLVLHAEALGFDLVFALSQWLPKGGYGGVFDGNALDSFQTTAALTSITKRILLVSTIHVLYGPMHPLHLAKWGATLDHISGGRWGINLVTGHRAVEHEAFGWNRIEHDKRYALADEFAQVLQRLWSDDEPYSFEGESSWKLKNAFVTPKPRYGRPLLVNATGSDAGIAFAARHSDIVFITSPGASDFASAIQVLPAHAQRVKQAARDQGREIRTLLNPMVISRASEAETRDYYNAIVAHQDFRTPEGFQALDSDAHAWKGRAGIDPPSRRAIGGNIEVVGTPEQVVEQFIQLKRAGIDGLQLSFFDFKPDLEFFGEHILPLMKQAGLRF
>NZ_CP043046.1|WP_148816714.1|4339868_4340900_-|aldo/keto-reductase
MSHRYLGRSALQVSRLALGTMMFGGPTDEATSHEIIARAKASGVNFIDTADVYQKGKTEEVVGRAIRGDRDDWVLATKFGNPLGEGPNRRGSSRKWIIESVENSLRRLGTDYLDILYFHRADFNAPLGEAVRAIGDLVRSGKIRYFGVSNFTGWRLAEVAYLADAESIDRPVASQPLYNLVNRTAEVEQLPAAHAFGVGVVSYSPLARGVLTAKYDSVDAPAEGSRAARKDKRLLETEWRQESVDIARVIREHIAARGIDPVAFALGWVLNNRLITSAIAGPRTVEQWDGYAKALDYVFTPEDEALVNRLVVAGHSSTPGYTDPGHPVEGRVARVLAAATVKE
>NZ_CP043046.1|WP_148816713.1|4338199_4339864_-|ABC-transporter-substrate-binding-protein
MRLNTNLSSHAVLKTIGQRTSRFLLNAAVATLGLSLSLGAVAQTASTTAAPVPTDAAKRGGTLTWIVTPEPAAFVPLTTTAGGSTDLGPKVVEGLFNFDVKLQPIPALATAWQVTPDGLRYTFTLRKGVKWHDGKDFSAADVVFSIETLKTVHPRGRVTFANVRSIEAPDAHTVILLLDKPAPYLLTALDGAESPIIPKHLYEGKDIASNPLNNAPIGTGPFVFKEWVRGSYVKLERNPNYWDQPRPYLDAIVARFIPDAAARAAALESGEVQLGNKVIPLSDIERFKALPKITVDITAWPYVGDHQQIYFNLDSEPFKRREVRLAVAQALNLDVFAKTIWYGHGVPSATPIGAASPFHNPAIKRYPYDVKAAEAALDAAGYKRGADGKRFAVRLLNNPFQDRRAADFVRQSLIRIGIDAELQTLDFATYVTRVYTDRAFDITLENLTNVFDPTIGVQRVFWSKNFKVGLPFSNAPHYVSADADRLLEAAAGEADAARRRALFFEFQEVIHRDIPSIELGANPNVTIAARNLHDWGVNAGGVRANLARAYFSKP
>NZ_CP043046.1|WP_148816712.1|4337162_4338158_-|ABC-transporter-permease-subunit
MSNNATWARIGGTLRRNAWQAVPTILGIIVLNFVLMELVPGDAADVIAAEAGSATAESMAQLRAHFGLDLPMLRRLWDYLSGLVFLDLGVSPRHNTEVTTLIFGRLGNTLLLMGTALGVAVLSGVLIGVLMSLKAGKWQDRVLSVLALLLYSTPGFWLGLMAIVLFSVKLGWLPTGGDHSIGAGLTGWPAVIDGARHLVLPALATAGFFVAIFSRLTRASMLEVNRQDYVRTAESKGLSPAAITFRHVLRNALIPVTTVAGMHFGALLGGATVIETVFSWPGLGRLALESVLARDYSVLLGILFMASLLVIVVNMLVDLLHAWLDPRIQIR
>NZ_CP043046.1|WP_148816711.1|4336217_4337147_-|ABC-transporter-permease-subunit
MTRQAVLGWRPWRTAASKAVAAQPVTGALAAPSRHTAWKALLRNPSAMAGLLILSAFVGLALFANVIFPGDPLDMVTEPLLWPGQDSTALLGSDSLGRNVAAGVAHGARVSLAVGAVAALISLTIGVLVGASAGYFGGWVDDLLVRLTELIQTIPTFLLVIVIVAIGQPSVRVIVLAIGLASWPVIARLVRAEFRALRESEFVLAARSQGFSDAWIIFKEILPNALPPVVVTTSVLVATSILQESALSFLGMGDPNIVSWGSMIGEGREMLRTAWFLTAVPGIAIILSVLSLNLLGDGLNDALNPRSRG
>NZ_CP043046.1|WP_148816710.1|4334374_4336216_-|oligopeptide-ABC-transporter-ATP-binding-protein-OppD
MTTLKQPANTYAANAGDGRRSTTAAPLLDVRALNVHFQGRGHAHHAVRDLNFSVERGETLALVGESGCGKSTTALSILRLLGPQAKMGGELRFQGRDILSLDTLALRALRGRDISMIFQEPMTSLNPVHTVGAQIIETLRLHQGLSYEAARKRTLDMLELVRIPEPQRRIDDYPHNLSGGQRQRVMIAMAVACQPKLLIADEPTTALDVTVQARILELLDQLRRDLSMGLLLITHDLGVVSQWADRVLVMFDGQKVEEGPARQVFEQPRHAYARGLLGASLHAGKEVHYSAGLLPEIHRLADSQGEGQGFRLVTPTLRAGVVKGAVKDGANRPATAANASPASASPTETDKASPLLSVQSLRTSYPKRDGGVFHAVDNVSFDIARGETVGLVGESGCGKSSLSRTLMRLIPSSAGKIVFDGTDLAALKERQVKPWRRHIQMVFQDPYASLNPRRNVHDTLDAVLAVHGERDKRERARQISQTLDRVGLPAAAASRYPHEFSGGQRQRIGIARALIVRPSLLILDEPVSALDVSIQAQILNLLVELKHDFGLSYLFISHDLSVVRYIADRVLVMHGGQIVEQGDHQSIWQSPQHDYTRSLIAAVPKPLPVMQAA
>NZ_CP043046.1|WP_148816709.1|4333502_4334360_+|hypothetical-protein
MKKLLFLIALAVCVLIGAYLIFKRHDPAQDAPRKIEVGMRMTVNDLIERNRLDMGPRVPQGYVIDVDKLGDVMPMYFDDNWITLHLLDGDQIFDLPPGRTLQISQNAGRVIGLSFRPFAQPRPLSDMQAYVTDLIASLERKGWQRTSSSKIPAGPEDFDVGAKSVFGAMRSPSGSELTMTLRDYGLAPKHESFIIVPDPTHKPAQRSQTYLLEIDVGDGRTEGYAELVYPRRIFETGDKNHALPLRRWIEAPDWTPEKAGMVPTTAEERAKPDASDWKMPPISQR
>NZ_CP043046.1|WP_148816719.1|4352319_4352625_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSFVVVVTENVPPRLRGRMAIWLLEVRAGVYIGDVSTRTREMLWEQLVAGHESGNVVMAWASSHESGYEFQTLGENRRFPVEFDGLQLVSFEPLQDSEKDA
>NZ_CP043046.1|WP_148819551.1|4352624_4353512_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MKDRVSMIFIQYGQIDVLDGAFVVIDQTGVRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWIGEAGVRLYASGQPGGARADRLLYQAKLALDDDLRLKVVRKMYEIRFQEPAPARRSVEQLRGIEGARVRETYKLLARQYGVDWQSRNYDRQQWDVADIPNRCLSAATSCLYGITEAAVLAAGYAPAVGFIHTGKPLSFVYDVADLFKFDTVVPLAFKIAAKPAGNPERQVRLACRDMFRSTKLLAKIIPAIEEVLAAGEISPPEAPPESVPPAIPNASSIGDVGHRAQ
>NZ_CP043046.1|WP_148816720.1|4353541_4354219_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MSHYFSRAQLLDRPLDMALLASLSRHGDAYRDHALVWRLFPGDNEQRDFLFRRELDARGKAFYYVVSARAPIAEAGLLAVQSKPYAPVFESGDWVRFDLRANPTVARRDAAGGKSRRHDVLMEAKRQGASLPEASRNDLITERSLAWLSSRGEDWGLEFQEESVLTTAYTQHRLHHKKRSIEFSSFDYQGLAQVTDPARLAAKLVGGVGHARAFGCGLLLVKRVS
>NZ_CP043046.1|WP_148816721.1|4354215_4354983_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MADYLVMRLYGPLASWGEIAVGESRHSAVHPSKSALIGLLGAALGIKRDDDTGQATLIAGYRFGVKLVSVGTPLRDYHTIQAPEQQRKIRYRTRRQELADPTRVGTLLSAREYRCDSIALVAVEALSGAPASLSALDHALRHPVFPLYLGRKSCPLAVPLSPQQVGGVTLRSALDDTPQYSLFSLLNTTGEHAWPTREDRIGFRLSAARYYWESGMDAGMEASFHTDRHDQPLSRLRWQFAPRQESVFLAAEESR
>NZ_CP043046.1|WP_148816722.1|4354987_4356022_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTRFVQLHLLTSYPPANLNRDDTGNPKTARVGGVERLRISSQSLKRAWRTSEIFQQHLAGNIGTRTKRLGREAYEAFLKAGIAEKQATEWASQIASVYGTTKKESPLDIEQLVHVAPEERASLNQLIANVIADKRAPTESELKGLLHVQHAVDIAMFGRMLAGKNQFNAEAAVQVAHAIGVHASVVEDDYFTAVDDLNNDDSGAGHVGEAGFAAAVFYQYICIDRDRLKENLGGDETLTKQALGALTEAAATVGPTGKQNSFASRARAHYVLAEKGSQQPRSLSLAFVKPVTGIDYAKDAIDALTTVRNNMDKVYGACSDAHLDIDVLAGKGTLAALIDFVATE
>NZ_CP043046.1|WP_148816723.1|4356018_4356645_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MKHRYLNDAQASWVRAWWAAIHPQEQGSPAIHPGLLGLGRGARAALKRCAGVDELIVEASTNRLASGLMKIEADKQFKHFADDYAAVALVAGAVAAVRDDVRDGRSLAAQLGGDDAKLSELRFLRLMRTSDVDDFYRQLKRAIQLAGNKADVVALANDVIAWCVEQRQPVQDPNHKLKSRWARDYYLPARDRAVVEKSIESTSAEIRS
>NZ_CP043046.1|WP_148816724.1|4356641_4358207_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNTLCDPFLDVRTRDGDECRIRAVDVWRPDIYDLISPRPDFRAALFQYLIGVLQLSFAPAKLSDWKKYWDAPPTEAQLKAAFEPYLHAFELDTDKPAFMQDVDLLSDSEASPIAALLIESPGENTTKKNLDHFVHRGAVNGMCPTCAATALFTLQINAPSGGAGHRVSVRGGGPLTTLLMPRNPAATLWQKLWLNVIPKDWLGYPELADLSSVLPWMGPTRTSDPKGVGDTTPENVHPLQAYWSTPRRIRLDFANVQTGHCDLCGQHSETLLTQYRTRNYGTNYNGHWVHPLTPYSFDPKTLPLSIKGQKGGIGYRHWLGLAIGSDDAKPKAARVVEHMNSKQGKLPVKLWCFGYDMDNMKARCWYDSTLPFHNIESEWQLRHFAKAARLAIDVASESASLLGKYVKAARFNRPGDVASDAAVPLSFWQQSEPHFYALLEQLSQVDFDNEAMLAEPYQRWLRDTRKHALGLFDQWVQTAPIEDTNMRRVIQARADLVKWLHASKAMKPLRDIVNTHLKEAV
>NZ_CP043046.1|WP_148816725.1|4358507_4359872_-|type-II-toxin-antitoxin-system-HipA-family-toxin
MTRLAIWLDDAPIGWVGHDPALNLFSFDYAGTWTAAKHAFAISPRLPLKKEPEQSPEKHSAEVRQFFENLLPEGEALDHAAQAYGISKANLVGLMFALGKETAGALRVLMEAGTAEDAADSPPVRAAVSDANQLRRVTQEELSERIRRRAERPFSVWDGKVRLSIAGYQDKIAIYERDSEWFLVEGPRLASTVIVKPVPARPALASLPYNEYFCMQLAQRVGVKAANTRVATVPEPVLLVSRFDRLERADRVERLHLIDGCQALGLPVSMKYERPYGDGVDVRNIRDGVTYAKLFDLIARFSMQPAIDKLALLQWVIFQVLIGNTDAHGKNLSFFVNAAGLTLAPAYDMVCVPALDDAQLGNTYAMAIGDAFTADALSAFEWASFAKDNGLSGALVGRQIKLLADLVLKALPGVGGDPVVPDAVKHRITEVVQENCARQLAMADMVAQVRAEDL
>NZ_CP043046.1|WP_148816726.1|4359868_4360162_-|helix-turn-helix-domain-containing-protein
MRRVVPLPFPSDPLVQNAADFGAAIRAARTASSMTIADAALLVGVSKQTLADLETARASVGLATAINVARAFGVGVFIAAPEDREIVRRQLLSERTS
>NZ_CP043046.1|WP_148816727.1|4360416_4361934_+|gliding-motility-protein
MTPTPGDIFAFYNARLNAYTAIQVTHVETDKKPAKVAVLTLDWRGKTLPSDAEIAVMQPKVFDFFFWNARFVHRWVSLPVPPGFTHVGHKPSLHDAEVNSYSGWPTGSSFYSQQQWDARPKAQRDRFKEAAATRDKTPLLTLGDVSVNLSTQRLDGERLAMAGDLSVFDALPLLTNVTTDRPIAGLFDFLRKHAFVYEAELCNHGEARVDLRGTYLTRLSLDVTGVTELFLNDDLEHLSLLGTPSSDLRIHANADGRWLTVMLIDPDVPWQGLDALGALNVRQGRDVDVAKIVTRFPALSELRIWGAPGYVRNLPSLAALSGLQTWTFYDVFGFGPEDIPASSNFPMLGMFWTHSIPADAAAAIKKAYKAATANGLDLAVRQPRKPEWLAANLDNPFRDWDGTEGITAAQAKKGAALYKTARADALKVAGEADSLAALGPIVRTYIEAFNKLDARNNFIFTEEREQICMAWQQIVDAVDEKRRELDAGPVDRTALDELMDSIRDF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP043046_2	2.19\|4351406\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351406-4351437	32	NZ_CP043046.1	4795566-4795597	0	1.0

1. spacer 2.19|4351406|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to position: 4795566-4795597, mismatch: 0, identity: 1.0

gcgcgcgggtcaagggcgatgcgtagaagtgg	CRISPR spacer
gcgcgcgggtcaagggcgatgcgtagaagtgg	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	KT803877	Burkholderia phage PE067, complete genome	40429-40460	3	0.906
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	437679-437710	5	0.844
NZ_CP043046_1	1.2\|4345938\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4345938-4345969	32	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	142726-142757	6	0.812
NZ_CP043046_1	1.2\|4345938\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4345938-4345969	32	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	152518-152549	6	0.812
NZ_CP043046_1	1.2\|4345938\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4345938-4345969	32	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	141864-141895	6	0.812
NZ_CP043046_1	1.13\|4346609\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346609-4346640	32	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	1054074-1054105	6	0.812
NZ_CP043046_1	1.19\|4346975\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346975-4347006	32	MN850623	Escherichia phage sortsyn, complete genome	30147-30178	6	0.812
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3983402-3983433	6	0.812
NZ_CP043046_2	2.15\|4351161\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351161-4351192	32	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	83471-83502	6	0.812
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	1141315-1141346	7	0.781
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	NZ_CP016618	Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence	404797-404828	7	0.781
NZ_CP043046_2	2.4\|4350490\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350490-4350521	32	CP003953	Rhodococcus opacus PD630 plasmid 4, complete sequence	51437-51468	7	0.781
NZ_CP043046_2	2.4\|4350490\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350490-4350521	32	NZ_LR134466	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence	73541-73572	7	0.781
NZ_CP043046_1	1.4\|4346060\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346060-4346091	32	NZ_CP021915	Sagittula sp. P11 plasmid unnamed2, complete sequence	16446-16477	8	0.75
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	HM151342	Roseobacter phage RDJL Phi 1, complete genome	7874-7905	8	0.75
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	10616-10647	8	0.75
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NC_000914	Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence	360191-360222	8	0.75
NZ_CP043046_1	1.17\|4346853\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346853-4346884	32	NC_048758	Serratia phage Parlo, complete genome	32111-32142	8	0.75
NZ_CP043046_1	1.19\|4346975\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346975-4347006	32	NZ_CP049322	Caballeronia sp. SBC2 plasmid pSBC2-6, complete sequence	44676-44707	8	0.75
NZ_CP043046_1	1.19\|4346975\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346975-4347006	32	NZ_CP009293	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	227463-227494	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN234223	Mycobacterium phage Philly, complete genome	43377-43408	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KP027207	Mycobacterium phage Chandler, complete genome	44306-44337	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN096360	Mycobacterium phage Rita1961, complete genome	43511-43542	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MG839014	Mycobacterium phage RagingRooster, complete genome	43527-43558	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KJ194581	Mycobacterium phage Audrey, complete genome	43522-43553	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KR080203	Mycobacterium phage OrangeOswald, complete genome	43526-43557	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MH513976	Mycobacterium phage Morty007, complete genome	44305-44336	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MH051265	Mycobacterium phage Yahalom, complete genome	43538-43569	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MH316565	Mycobacterium phage Mortcellus, complete genome	44162-44193	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MT310871	Mycobacterium phage Jackstina, complete genome	43447-43478	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MK359357	Mycobacterium phage RomaT, complete genome	44300-44331	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	JF704095	Mycobacterium phage Daisy, complete sequence	43551-43582	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	EU816589	Mycobacterium phage Phaedrus, complete genome	43446-43477	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN096359	Mycobacterium phage Obutu, complete genome	43510-43541	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MK061414	Mycobacterium phage Marley1013, complete genome	44305-44336	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MT952851	Mycobacterium phage Gervas, complete genome	43505-43536	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MG925353	Mycobacterium phage Nozo, complete genome	44285-44316	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KJ194584	Mycobacterium phage Heathcliff, complete genome	43488-43519	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN444872	Mycobacterium phage SynergyX, complete genome	43527-43558	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MH576977	Mycobacterium phage Tydolla, complete genome	44261-44292	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MG925338	Mycobacterium phage ChaChing, complete genome	43539-43570	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NC_023742	Mycobacterium phage Akoma, complete genome	43527-43558	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MG920059	Mycobacterium phage Baloo, complete genome	43525-43556	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NC_023686	Mycobacterium phage Gadjet, complete genome	43537-43568	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KR080205	Mycobacterium phage Corofin, complete genome	43549-43580	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NC_041965	Mycobacterium phage Athena, complete genome	44274-44305	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	DQ398049	Mycobacterium phage Pipefish, complete genome	44918-44949	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KF493879	Mycobacterium phage Bernardo, complete genome	44071-44102	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MT310892	Mycobacterium phage Compostia, complete genome	43954-43985	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	JN699018	Mycobacterium phage Kamiyu, complete genome	43495-43526	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NC_012027	Mycobacterium phage Phlyer, complete genome	44266-44297	8	0.75
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN444873	Mycobacterium phage Abinghost, complete genome	43516-43547	8	0.75
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NZ_CP034782	Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence	243008-243039	8	0.75
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NZ_CP041355	Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence	104702-104733	8	0.75
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	21963-21994	8	0.75
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	111042-111073	8	0.75
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	264250-264281	8	0.75
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	1046676-1046707	8	0.75
NZ_CP043046_2	2.11\|4350917\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4350917-4350948	32	MG641885	Salmonella phage PMBT28, complete genome	36184-36215	8	0.75
NZ_CP043046_2	2.14\|4351100\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351100-4351131	32	NZ_CP040824	Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence	92760-92791	8	0.75
NZ_CP043046_2	2.20\|4351467\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351467-4351498	32	NZ_CP016292	Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence	7185-7216	8	0.75
NZ_CP043046_2	2.20\|4351467\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351467-4351498	32	NC_003903	Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence	201402-201433	8	0.75
NZ_CP043046_2	2.21\|4351528\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351528-4351559	32	CP000385	Mycobacterium sp. MCS Plasmid1, complete sequence	123150-123181	8	0.75
NZ_CP043046_2	2.21\|4351528\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351528-4351559	32	NC_008704	Mycobacterium sp. KMS plasmid pMKMS02, complete sequence	149209-149240	8	0.75
NZ_CP043046_2	2.21\|4351528\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351528-4351559	32	NZ_CP020371	Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence	250050-250081	8	0.75
NZ_CP043046_1	1.2\|4345938\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4345938-4345969	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	317658-317689	9	0.719
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	NC_003324	Sinorhizobium phage PBC5, complete genome	13296-13327	9	0.719
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	AF448724	Sinorhizobium meliloti phage PBC5, complete genome	13296-13327	9	0.719
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	561841-561872	9	0.719
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	594857-594888	9	0.719
NZ_CP043046_1	1.15\|4346731\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346731-4346762	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2141098-2141129	9	0.719
NZ_CP043046_1	1.16\|4346792\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346792-4346823	32	NZ_CP050953	Rhodococcus sp. DMU1 plasmid unnamed	143342-143373	9	0.719
NZ_CP043046_1	1.17\|4346853\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346853-4346884	32	NZ_CP044991	Deinococcus sp. AJ005 plasmid p115k, complete sequence	92976-93007	9	0.719
NZ_CP043046_1	1.22\|4347158\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4347158-4347189	32	NC_008761	Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence	27758-27789	9	0.719
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NZ_AP018521	Sphingobium sp. YG1 plasmid pYGP2, complete sequence	38531-38562	9	0.719
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	119343-119374	9	0.719
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	296192-296223	9	0.719
NZ_CP043046_2	2.4\|4350490\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350490-4350521	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	262378-262409	9	0.719
NZ_CP043046_2	2.4\|4350490\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350490-4350521	32	MT498064	Microbacterium phage Pabst, complete genome	45922-45953	9	0.719
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	577232-577263	9	0.719
NZ_CP043046_2	2.12\|4350978\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4350978-4351009	32	NZ_CP011771	Croceicoccus naphthovorans strain PQ-2 plasmid p1, complete sequence	66269-66300	9	0.719
NZ_CP043046_2	2.14\|4351100\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351100-4351131	32	AB276040	Ralstonia phage RSA1 DNA, complete genome	19227-19258	9	0.719
NZ_CP043046_2	2.14\|4351100\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351100-4351131	32	AB981169	Ralstonia phage RSY1 DNA, complete genome	24696-24727	9	0.719
NZ_CP043046_2	2.14\|4351100\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351100-4351131	32	NC_009382	Ralstonia phage phiRSA1, complete genome	19227-19258	9	0.719
NZ_CP043046_2	2.15\|4351161\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351161-4351192	32	NZ_CP014675	Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence	190311-190342	9	0.719
NZ_CP043046_2	2.15\|4351161\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351161-4351192	32	NZ_CP010410	Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence	278938-278969	9	0.719
NZ_CP043046_2	2.16\|4351222\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351222-4351253	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1259599-1259630	9	0.719
NZ_CP043046_2	2.18\|4351345\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351345-4351376	32	NZ_CP026738	Bacillus megaterium strain YC4-R4 plasmid unnamed2	19352-19383	9	0.719
NZ_CP043046_2	2.19\|4351406\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351406-4351437	32	NC_015382	Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence	91809-91840	9	0.719
NZ_CP043046_2	2.24\|4351711\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351711-4351742	32	NC_047785	Shigella phage SH6, complete genome	43372-43403	9	0.719
NZ_CP043046_1	1.3\|4345999\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4345999-4346030	32	AB920995	Ralstonia phage RSJ2 DNA, complete genome	27219-27250	10	0.688
NZ_CP043046_1	1.5\|4346121\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346121-4346152	32	NZ_CP023440	Thauera sp. K11 plasmid pTX1, complete sequence	12915-12946	10	0.688
NZ_CP043046_1	1.14\|4346670\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4346670-4346701	32	MN693462	Marine virus AFVG_25M534, complete genome	17322-17353	10	0.688
NZ_CP043046_1	1.16\|4346792\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346792-4346823	32	NZ_CP046332	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2	219156-219187	10	0.688
NZ_CP043046_1	1.16\|4346792\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346792-4346823	32	NC_006466	Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence	203588-203619	10	0.688
NZ_CP043046_1	1.16\|4346792\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4346792-4346823	32	NZ_CP048385	Citrobacter freundii strain 62 plasmid p6_C, complete sequence	15473-15504	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	47100-47131	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MF919500	Mycobacterium phage Dalmatian, complete genome	40792-40823	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MN585983	Mycobacterium phage Retro23, complete genome	40812-40843	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MF919490	Mycobacterium phage Anselm, complete genome	40819-40850	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	MH825709	Mycobacterium phage NicoleTera, complete genome	40573-40604	10	0.688
NZ_CP043046_2	2.2\|4350368\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350368-4350399	32	KX576639	Mycobacterium phage DudeLittle, complete genome	40558-40589	10	0.688
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NZ_CP033038	Agrobacterium fabrum strain 12D13 plasmid pAt12D13c, complete sequence	1489-1520	10	0.688
NZ_CP043046_2	2.3\|4350429\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350429-4350460	32	NC_019555	Agrobacterium tumefaciens strain F64/95 plasmid pAoF64/95, complete sequence	128788-128819	10	0.688
NZ_CP043046_2	2.4\|4350490\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350490-4350521	32	NC_022536	Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence	381516-381547	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	242720-242751	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1580368-1580399	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1451877-1451908	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	79969-80000	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	421974-422005	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	421970-422001	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	716160-716191	10	0.688
NZ_CP043046_2	2.8\|4350734\|32\|NZ_CP043046\|CRISPRCasFinder,CRT	4350734-4350765	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1563835-1563866	10	0.688
NZ_CP043046_2	2.18\|4351345\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351345-4351376	32	NZ_CP009648	Bacillus pseudomycoides strain BTZ plasmid pBTZ_3, complete sequence	5441-5472	10	0.688
NZ_CP043046_2	2.32\|4352200\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4352200-4352231	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	1679508-1679539	10	0.688
NZ_CP043046_1	1.24\|4347280\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4347280-4347311	32	MG592546	Vibrio phage 1.179.O._10N.286.45.F12, partial genome	29301-29332	11	0.656
NZ_CP043046_2	2.19\|4351406\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351406-4351437	32	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	1035118-1035149	11	0.656
NZ_CP043046_2	2.19\|4351406\|32\|NZ_CP043046\|CRISPRCasFinder,CRT,PILER-CR	4351406-4351437	32	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	890937-890968	11	0.656

1. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KT803877 (Burkholderia phage PE067, complete genome) position: , mismatch: 3, identity: 0.906

tatgcgtccttgaacgccatccgagcaccgac	CRISPR spacer
tatgcggccttgaacgccatccgtgcaccgat	Protospacer
****** **************** *******.

2. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 5, identity: 0.844

tctttgtggccacgctgaccggcgcatagagc-	CRISPR spacer
tctttgtggccaggctgcccggcgc-tgcagca	Protospacer
************ **** ******* *. ***

3. spacer 1.2|4345938|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 6, identity: 0.812

-gtcagctgattgccgtcgtagtagtcggcgca	CRISPR spacer
cggcaac-gattgccgtcgtacttgtcggcgcc	Protospacer
 * **.* ************* * ********

4. spacer 1.2|4345938|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 6, identity: 0.812

-gtcagctgattgccgtcgtagtagtcggcgca	CRISPR spacer
cggcaac-gattgccgtcgtacttgtcggcgcc	Protospacer
 * **.* ************* * ********

5. spacer 1.2|4345938|32|NZ_CP043046|CRISPRCasFinder,CRT matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 6, identity: 0.812

-gtcagctgattgccgtcgtagtagtcggcgca	CRISPR spacer
cggcaac-gattgccgtcgtacttgtcggcgcc	Protospacer
 * **.* ************* * ********

6. spacer 1.13|4346609|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

gcccacataggcacaccagccgggaccaccaa	CRISPR spacer
gtccacatcggcacaccagccgggacatacag	Protospacer
*.****** *****************   **.

7. spacer 1.19|4346975|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to MN850623 (Escherichia phage sortsyn, complete genome) position: , mismatch: 6, identity: 0.812

gcactgggagcgccagaagaaccgcgaggtaa	CRISPR spacer
aggctgggagcgccagaaggaccgcaaggtga	Protospacer
. .****************.*****.****.*

8. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.812

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
gcctccgccgcggcctccacgccgtcgaccga	Protospacer
* *  *****.***** *************.*

9. spacer 2.15|4351161|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 6, identity: 0.812

cgtttggtgtcgttgcgcagccgagccaagcg---	CRISPR spacer
cgtttgacgtcgttgcgcagccg---caggcggat	Protospacer
******..***************   **.***

10. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tatgcg---tccttgaacgccatccgagcaccgac	CRISPR spacer
---gcgagttcgttgaacgccatccgaccaccaag	Protospacer
   ***   ** *************** ****.*

11. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP016618 (Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

tatgcg---tccttgaacgccatccgagcaccgac	CRISPR spacer
---gcgagttcgttgaacgccatccgaccaccaag	Protospacer
   ***   ** *************** ****.*

12. spacer 2.4|4350490|32|NZ_CP043046|CRISPRCasFinder,CRT matches to CP003953 (Rhodococcus opacus PD630 plasmid 4, complete sequence) position: , mismatch: 7, identity: 0.781

gatgacatcacggtcgctgcactgcgcgcggc	CRISPR spacer
gcacccgacacggtcgctgcgctgcgcgcggc	Protospacer
*    *. ************.***********

13. spacer 2.4|4350490|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_LR134466 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence) position: , mismatch: 7, identity: 0.781

gatgacatcacggtcgctgcactgcgcgcggc	CRISPR spacer
cagggtttcacggccgccgcactgcgcgcggc	Protospacer
 * *.. ******.***.**************

14. spacer 1.4|4346060|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP021915 (Sagittula sp. P11 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

gcgtcgaacagcggagaaacagcggcggtggg	CRISPR spacer
cggccgcccagcgatgaaacagcggcggtgga	Protospacer
  *.**  *****. ****************.

15. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to HM151342 (Roseobacter phage RDJL Phi 1, complete genome) position: , mismatch: 8, identity: 0.75

tatgcgtccttgaacgccatccgagcaccgac	CRISPR spacer
ccagcttctttgaacgccatccgagcatgggc	Protospacer
.  ** **.******************. *.*

16. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.75

tctttgtggccacgctgaccggcgcatagagc	CRISPR spacer
gcgatccggccacgctgatcggcgcataaagg	Protospacer
 *  * .***********.*********.**

17. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_000914 (Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence) position: , mismatch: 8, identity: 0.75

tctttgtggccacgctgaccggcgcatagagc	CRISPR spacer
acattgtggccacgctggtcggcgcacacgac	Protospacer
 * **************..*******.* ..*

18. spacer 1.17|4346853|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_048758 (Serratia phage Parlo, complete genome) position: , mismatch: 8, identity: 0.75

ttccgcgagtggaacgcgctggagtacgagaa	CRISPR spacer
atcgatgagtggaacgcgctggaagacgaaga	Protospacer
 ** ..*****************. ****..*

19. spacer 1.19|4346975|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049322 (Caballeronia sp. SBC2 plasmid pSBC2-6, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgggagcgccagaagaaccgcgaggtaa	CRISPR spacer
gggctgggtgcgccagcagaaccgcgacctct	Protospacer
* .***** ******* **********  *

20. spacer 1.19|4346975|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009293 (Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgggagcgccagaagaaccgcgaggtaa	CRISPR spacer
gacctgggagcgccaggagaagcgcgcgctcc	Protospacer
*  *************.**** **** * *

21. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN234223 (Mycobacterium phage Philly, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

22. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KP027207 (Mycobacterium phage Chandler, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

23. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN096360 (Mycobacterium phage Rita1961, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

24. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MG839014 (Mycobacterium phage RagingRooster, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

25. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KJ194581 (Mycobacterium phage Audrey, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

26. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KR080203 (Mycobacterium phage OrangeOswald, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

27. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MH513976 (Mycobacterium phage Morty007, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

28. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MH051265 (Mycobacterium phage Yahalom, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

29. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MH316565 (Mycobacterium phage Mortcellus, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

30. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MT310871 (Mycobacterium phage Jackstina, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

31. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MK359357 (Mycobacterium phage RomaT, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

32. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to JF704095 (Mycobacterium phage Daisy, complete sequence) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

33. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to EU816589 (Mycobacterium phage Phaedrus, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

34. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN096359 (Mycobacterium phage Obutu, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

35. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MK061414 (Mycobacterium phage Marley1013, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

36. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MT952851 (Mycobacterium phage Gervas, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

37. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MG925353 (Mycobacterium phage Nozo, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

38. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KJ194584 (Mycobacterium phage Heathcliff, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

39. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN444872 (Mycobacterium phage SynergyX, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

40. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MH576977 (Mycobacterium phage Tydolla, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

41. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MG925338 (Mycobacterium phage ChaChing, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

42. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_023742 (Mycobacterium phage Akoma, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

43. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MG920059 (Mycobacterium phage Baloo, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

44. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_023686 (Mycobacterium phage Gadjet, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

45. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KR080205 (Mycobacterium phage Corofin, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

46. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_041965 (Mycobacterium phage Athena, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

47. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to DQ398049 (Mycobacterium phage Pipefish, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

48. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KF493879 (Mycobacterium phage Bernardo, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

49. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MT310892 (Mycobacterium phage Compostia, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

50. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to JN699018 (Mycobacterium phage Kamiyu, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

51. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_012027 (Mycobacterium phage Phlyer, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

52. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN444873 (Mycobacterium phage Abinghost, complete genome) position: , mismatch: 8, identity: 0.75

tcgaacgtgacgctctcggcgtt---ggagatgta	CRISPR spacer
tcgaacgtcacgatctcggcgttctcgggcac---	Protospacer
******** *** **********   **. *.

53. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP034782 (Pseudomonas sp. MPC6 plasmid pMPC6-328K, complete sequence) position: , mismatch: 8, identity: 0.75

tcagcctgcgccgtggcgtagtcggaccattg--	CRISPR spacer
acatcctgcgcggtggcgtagtcga--cgtcgcc	Protospacer
 ** ******* ************.  *.*.*

54. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP041355 (Pseudomonas aeruginosa strain AZPAE15042 plasmid pIHMA87, complete sequence) position: , mismatch: 8, identity: 0.75

tcagcctgcgccgtggcgtagtcggaccattg--	CRISPR spacer
gcagcctgcagcgtggcgtagtcg--ccgacgct	Protospacer
 ********. *************  **. .*

55. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 8, identity: 0.75

tcagcctgcgccgtggcgtagtcggaccattg	CRISPR spacer
tcagcctgcgccgtggcgaaatcatggcgctg	Protospacer
****************** *.**. . *..**

56. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 8, identity: 0.75

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
gaggtggccgtgcccagcacgccgtcgacccg	Protospacer
** .  ****** ** ************** .

57. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 8, identity: 0.75

--gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tcggcg--gccgtgtcctgcacgccgccgactac	Protospacer
  *.*.  ****** ***********.****.*

58. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
gagaacgccgtgtcctgcacgcccggcacaca	Protospacer
** ********* **********    **  *

59. spacer 2.11|4350917|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to MG641885 (Salmonella phage PMBT28, complete genome) position: , mismatch: 8, identity: 0.75

ttggaccaccagaaaccctggtcgagatcgac	CRISPR spacer
atggctttccagaaaccctgttcgagttcgaa	Protospacer
 *** .. ************ ***** ****

60. spacer 2.14|4351100|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040824 (Paraoceanicella profunda strain D4M1 plasmid pD4M1F, complete sequence) position: , mismatch: 8, identity: 0.75

----gtctctgcttggcgtggccccgcgcatcctgg	CRISPR spacer
ggaagcct----atggcgtggcccggcgcatcgtgg	Protospacer
    *.**     *********** ******* ***

61. spacer 2.20|4351467|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016292 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gccaagtg-gaacgcctcccgcagctgaacatc	CRISPR spacer
-ccgcgcaccaacgcctccggcagatgaacatc	Protospacer
 **. *..  ********* **** ********

62. spacer 2.20|4351467|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_003903 (Streptomyces coelicolor A3(2) plasmid SCP1, complete sequence) position: , mismatch: 8, identity: 0.75

gccaagtggaacgcctcccgcagctgaacatc	CRISPR spacer
gcgaagtcgaacgcctcccgcagagcgacggc	Protospacer
** **** ***************   .**. *

63. spacer 2.21|4351528|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to CP000385 (Mycobacterium sp. MCS Plasmid1, complete sequence) position: , mismatch: 8, identity: 0.75

gacaggtacgagcgcacggcgtggtcgagttc	CRISPR spacer
atccagtccgagcgcacggcgttgtcgaggtg	Protospacer
. * .** ************** ****** *

64. spacer 2.21|4351528|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_008704 (Mycobacterium sp. KMS plasmid pMKMS02, complete sequence) position: , mismatch: 8, identity: 0.75

gacaggtacgagcgcacggcgtggtcgagttc	CRISPR spacer
atccagtccgagcgcacggcgttgtcgaggtg	Protospacer
. * .** ************** ****** *

65. spacer 2.21|4351528|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 8, identity: 0.75

gacaggtacgagcgcacggcgtggtcgagttc	CRISPR spacer
gcccgataccagcgcacggcgcggtcgaggat	Protospacer
* * *.*** ***********.*******  .

66. spacer 1.2|4345938|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcagctgattgccgtcgtagtagtcggcgca	CRISPR spacer
cgcagctgcttgccctcgtagtagttgaaggg	Protospacer
  ****** ***** **********.*. * .

67. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_003324 (Sinorhizobium phage PBC5, complete genome) position: , mismatch: 9, identity: 0.719

tatgcgtccttgaacgccatccgagcaccgac	CRISPR spacer
tcccgatcgttgaacgccatcagagcacctgc	Protospacer
* .  .** ************ ******* .*

68. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to AF448724 (Sinorhizobium meliloti phage PBC5, complete genome) position: , mismatch: 9, identity: 0.719

tatgcgtccttgaacgccatccgagcaccgac	CRISPR spacer
tcccgatcgttgaacgccatcagagcacctgc	Protospacer
* .  .** ************ ******* .*

69. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 9, identity: 0.719

tctttgtggccacgctgaccggcgcatagagc	CRISPR spacer
tgacggtggacacgctgaccggcgaatatgtc	Protospacer
*  . **** ************** *** . *

70. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 9, identity: 0.719

tctttgtggccacgctgaccggcgcatagagc	CRISPR spacer
tgacggtggacacgctgaccggcgaatatgtc	Protospacer
*  . **** ************** *** . *

71. spacer 1.15|4346731|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tctttgtggccacgctgaccggc---gcatagagc	CRISPR spacer
cctttgtgggcccgctgaccggcggtgtgtcg---	Protospacer
.******** * ***********   *..* *

72. spacer 1.16|4346792|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050953 (Rhodococcus sp. DMU1 plasmid unnamed) position: , mismatch: 9, identity: 0.719

tctatgagcaaatggccgctgctgccgctagc	CRISPR spacer
attgcgagcaactggtcgctgctgccgccaag	Protospacer
 .*..****** ***.************.*.

73. spacer 1.17|4346853|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044991 (Deinococcus sp. AJ005 plasmid p115k, complete sequence) position: , mismatch: 9, identity: 0.719

ttccgcgagtggaacgcgctggagtacgagaa	CRISPR spacer
aaacagggctggaacgcggtggagtaccagaa	Protospacer
   *. *. ********* ******** ****

74. spacer 1.22|4347158|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_008761 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP05, complete sequence) position: , mismatch: 9, identity: 0.719

tagagaacatggcgtcccttcccgccattggg	CRISPR spacer
ttaggccaatggcgacccttaccgccattggc	Protospacer
* ..*   ****** ***** **********

75. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_AP018521 (Sphingobium sp. YG1 plasmid pYGP2, complete sequence) position: , mismatch: 9, identity: 0.719

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
cgtggcgtgacgctgtcggcgttgcagacgca	Protospacer
.  ..********* ********* ***.*.*

76. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tcagcctgcgccgtggcgtagtcggaccattg	CRISPR spacer
agagcctgcgccgtgtcgtactcggacttgct	Protospacer
  ************* **** ******.  .

77. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 9, identity: 0.719

tcagcctgcgccgtggcgtagtcggaccattg	CRISPR spacer
ttggcctgcgccgtggcgctgtcggaagacct	Protospacer
*..***************. ******  *..

78. spacer 2.4|4350490|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 9, identity: 0.719

gatgacatcacggtcgctgcactgcgcgcggc	CRISPR spacer
tttcgcgtcacggtcgatgcgctgcgcgcgcg	Protospacer
  * .*.********* ***.*********

79. spacer 2.4|4350490|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MT498064 (Microbacterium phage Pabst, complete genome) position: , mismatch: 9, identity: 0.719

gatgacatcacggtcgctgcactgcgcgcggc	CRISPR spacer
ggactcggcacggtcggtgcaatgcgcgcggt	Protospacer
*.   *. ******** **** *********.

80. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
cgcaaggccgtggcctgcacgctgttcggcat	Protospacer
 .*** ****************.**. . **

81. spacer 2.12|4350978|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011771 (Croceicoccus naphthovorans strain PQ-2 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

accagacgaatcgccgcggctgcatctccggc	CRISPR spacer
ggccgacgaatcggggcggctgcatctgcttg	Protospacer
. * *********  ************ *

82. spacer 2.14|4351100|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to AB276040 (Ralstonia phage RSA1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gtctctgcttggcgtggccccgcgcatcctgg	CRISPR spacer
caaccgttttggcgtcgcgccgcgcatcctgg	Protospacer
   .*  .******* ** *************

83. spacer 2.14|4351100|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to AB981169 (Ralstonia phage RSY1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gtctctgcttggcgtggccccgcgcatcctgg	CRISPR spacer
caaccgttttggcgtcgcgccgcgcatcctgg	Protospacer
   .*  .******* ** *************

84. spacer 2.14|4351100|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_009382 (Ralstonia phage phiRSA1, complete genome) position: , mismatch: 9, identity: 0.719

gtctctgcttggcgtggccccgcgcatcctgg	CRISPR spacer
caaccgttttggcgtcgcgccgcgcatcctgg	Protospacer
   .*  .******* ** *************

85. spacer 2.15|4351161|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014675 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttggtgtcgttgcgcagccgagccaagcg	CRISPR spacer
ccggcgtcctcgttgcgcaggcgcgccaagcg	Protospacer
*   .* . *********** ** ********

86. spacer 2.15|4351161|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010410 (Xanthomonas sacchari strain R1 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

cgtttggtgtcgttgcgcagccgagccaagcg	CRISPR spacer
ctgcgggtgtcgttgcgcagccgcggcagcca	Protospacer
*  . ****************** * **. *.

87. spacer 2.16|4351222|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gggtgtagaggtgcgcaccaagaccaacgaat	CRISPR spacer
cgccgccgaggtgcacaccaagatcaacgagc	Protospacer
 * .*. *******.********.******..

88. spacer 2.18|4351345|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026738 (Bacillus megaterium strain YC4-R4 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

cgtatgtgttcttttgctcattcctcatctcc	CRISPR spacer
accttgtgttcttttgctaattcatcaatttc	Protospacer
  . ************** **** *** .*.*

89. spacer 2.19|4351406|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_015382 (Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcgcgggtcaagggcgatgcgtagaagtgg	CRISPR spacer
gcgcgcgcgccaagggcgatgcgacggtgatc	Protospacer
******* *.*************  *. *

90. spacer 2.24|4351711|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_047785 (Shigella phage SH6, complete genome) position: , mismatch: 9, identity: 0.719

gagaaaaaacgggagtccagccaatgaagaca	CRISPR spacer
caataaaaacgagagtccagccaacgatagta	Protospacer
 *. *******.************.** ...*

91. spacer 1.3|4345999|32|NZ_CP043046|CRISPRCasFinder,CRT matches to AB920995 (Ralstonia phage RSJ2 DNA, complete genome) position: , mismatch: 10, identity: 0.688

tatgtcttcgtgcctgccagcagtgcacgcac	CRISPR spacer
gggatggtcgagccagccagcagtgcacgcgg	Protospacer
 . .*  *** *** ***************.

92. spacer 1.5|4346121|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP023440 (Thauera sp. K11 plasmid pTX1, complete sequence) position: , mismatch: 10, identity: 0.688

tatgcgtccttgaacgccatccgagcaccgac	CRISPR spacer
ccggcgtccttgaacgccatcagggcgtggta	Protospacer
.  ****************** *.**.. *

93. spacer 1.14|4346670|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN693462 (Marine virus AFVG_25M534, complete genome) position: , mismatch: 10, identity: 0.688

gcctccgcccaatagcgcagctataagggtgc	CRISPR spacer
atctccgcccaatagcttagctatagagtcat	Protospacer
..************** .*******..* ...

94. spacer 1.16|4346792|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

tctatgagcaaatggccgctgctgccgctagc	CRISPR spacer
ggtcccagcgactggccgctgctgccgctgca	Protospacer
  * . ***.* *****************.

95. spacer 1.16|4346792|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 10, identity: 0.688

tctatgagcaaatggccgctgctgccgctagc	CRISPR spacer
ggtcccagcgactggccgctgctgccgctgca	Protospacer
  * . ***.* *****************.

96. spacer 1.16|4346792|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048385 (Citrobacter freundii strain 62 plasmid p6_C, complete sequence) position: , mismatch: 10, identity: 0.688

tctatgagcaaatggccgctgctgccgctagc	CRISPR spacer
cgccaaagcgaatggccgctgctggcgctcgg	Protospacer
. .  .***.************** **** *

97. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
ctcgacgtgacgctcgcggcgtgggagcgcca	Protospacer
.. .*********** ****** ****   .*

98. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MF919500 (Mycobacterium phage Dalmatian, complete genome) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
accaacgtgaccctctccgcgttggaccaact	Protospacer
 * ******** ***** ********   ..

99. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MN585983 (Mycobacterium phage Retro23, complete genome) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
accaacgtgaccctctccgcgttggaccaact	Protospacer
 * ******** ***** ********   ..

100. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MF919490 (Mycobacterium phage Anselm, complete genome) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
accaacgtgaccctctccgcgttggaccaact	Protospacer
 * ******** ***** ********   ..

101. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to MH825709 (Mycobacterium phage NicoleTera, complete genome) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
accaacgtgactctttcggcgttggacgaact	Protospacer
 * ******** **.*********** . ..

102. spacer 2.2|4350368|32|NZ_CP043046|CRISPRCasFinder,CRT matches to KX576639 (Mycobacterium phage DudeLittle, complete genome) position: , mismatch: 10, identity: 0.688

tcgaacgtgacgctctcggcgttggagatgta	CRISPR spacer
accaacgtgaccctctccgcgttggaccaact	Protospacer
 * ******** ***** ********   ..

103. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP033038 (Agrobacterium fabrum strain 12D13 plasmid pAt12D13c, complete sequence) position: , mismatch: 10, identity: 0.688

tcagcctgcgccgtggcgtagtcggaccattg	CRISPR spacer
aaggcctgcgccgtggcgttctcggaatgtgc	Protospacer
  .****************  ***** ..*

104. spacer 2.3|4350429|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_019555 (Agrobacterium tumefaciens strain F64/95 plasmid pAoF64/95, complete sequence) position: , mismatch: 10, identity: 0.688

tcagcctgcgccgtggcgtagtcggaccattg	CRISPR spacer
gcagcctgcgccggggcgtcgtcgttctgagc	Protospacer
 ************ ***** ****  *..

105. spacer 2.4|4350490|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_022536 (Rhizobium sp. IRBG74 plasmid IRBL74_p, complete sequence) position: , mismatch: 10, identity: 0.688

gatgacatcacggtcgctgcactgcgcgcggc	CRISPR spacer
tcgaccgacacgatcgcggcactgcgcgcggt	Protospacer
   . *. ****.**** *************.

106. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccgccgccgtgcccggcacgccgtcgatgcg	Protospacer
  *. ******* ** ************.  .

107. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccggatgcgtggccagcacgccgccgaccag	Protospacer
  *..   ******* ********.******.

108. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccggatgcgtggccagcacgccgccgaccag	Protospacer
  *..   ******* ********.******.

109. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
gcgttggccgtgacctgcacgccgtccacggt	Protospacer
*     ******.************* ** .

110. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccggatgcgtggccagcacgccgccgaccag	Protospacer
  *..   ******* ********.******.

111. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccggatgcgtggccagcacgccgccgaccag	Protospacer
  *..   ******* ********.******.

112. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccaacgtcgtggcctgcacgctgttcggcgg	Protospacer
  *****.**************.**. . *..

113. spacer 2.8|4350734|32|NZ_CP043046|CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.688

gacaacgccgtggcctgcacgccgtcgaccaa	CRISPR spacer
tccggatgcgtggccagcacgccgccgaccag	Protospacer
  *..   ******* ********.******.

114. spacer 2.18|4351345|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009648 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_3, complete sequence) position: , mismatch: 10, identity: 0.688

cgtatgtgttcttttgctcattcctcatctcc	CRISPR spacer
gaaatatgttcttttgctaattcctcaatata	Protospacer
 . **.************ ******** . .

115. spacer 2.32|4352200|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 10, identity: 0.688

ccgcccagcccggactcattgaattcgtaaag	CRISPR spacer
taatccagccgggactcaatgaattcgttcgt	Protospacer
. ..****** ******* *********  .

116. spacer 1.24|4347280|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to MG592546 (Vibrio phage 1.179.O._10N.286.45.F12, partial genome) position: , mismatch: 11, identity: 0.656

gatttccgctcatcgaagttatcagcaaagtc	CRISPR spacer
tccgcttgctcttcgaagttatcaccaaagaa	Protospacer
  . ...**** ************ *****

117. spacer 2.19|4351406|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.656

gcgcgcgggtcaagggcgatgcgtagaagtgg	CRISPR spacer
gcgcgcgggtcaggggcgttgcgccacttcca	Protospacer
************.***** ****. .   . .

118. spacer 2.19|4351406|32|NZ_CP043046|CRISPRCasFinder,CRT,PILER-CR matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 11, identity: 0.656

gcgcgcgggtcaagggcgatgcgtagaagtgg	CRISPR spacer
gcgcgcgggtcaggggcgttgcgccacttcca	Protospacer
************.***** ****. .   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3836683 : 3845139

uncultured_Caudovirales_phage(16.67%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148816347.1\|3836683_3838567_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-32	36.2
WP_148816348.1\|3839051_3840572_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.5e-53	33.9
WP_148816349.1\|3841218_3843528_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	8.5e-170	42.9
WP_148816350.1\|3843524_3843845_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.0e-12	45.7
WP_148819441.1\|3844214_3844460_+	cold shock domain-containing protein	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-20	76.6
WP_148819443.1\|3844725_3845139_+	DUF192 domain-containing protein	A0A222YVT9	Synechococcus_phage	1.5e-13	43.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043046

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection