CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP033312	Azospirillum brasilense strain Sp 7 chromosome 1, complete sequence	2 crisprs	DEDDh,WYL,cas3,cas5,cas8c,cas7b,cas4,cas1,cas2,csa3,DinG	1	6	0
NZ_CP033313	Azospirillum brasilense strain Sp 7 chromosome 2, complete sequence	0 crisprs	csa3,RT	0	0	1
NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	0 crisprs	csa3	0	0	2
NZ_CP033314	Azospirillum brasilense strain Sp 7 chromosome 3, complete sequence	3 crisprs	csa3	0	10	0
NZ_CP033317	Azospirillum brasilense strain Sp 7 plasmid p5, complete sequence	0 crisprs	NA	0	0	2
NZ_CP033316	Azospirillum brasilense strain Sp 7 chromosome 4, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP033312_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033312_1

1007622-1008123

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	PILER-CR
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CRISPRCasFinder
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CRT

7 spacers

cas3,cas5,cas8c,cas7b,cas4,cas1,cas2

The CRISPR arrays of NZ_CP033312_1

>merge|NZ_CP033312|1|1007622-1008123|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATCCAGGCCCTCGCACGGAGGGCGACCCGCCGCGCCCGCTCTGACCAAGCGGACGCGGACGGTTTCAATCCACGCCCTCGCACGGAGGGCGACGAGGACGGCTTCAAACCGGCCATCGAGGTCGTCGAGTTTCAATCCACGCCCTCGCACGGAGGGCGACCGCTACTACTGGCTTGAGGCACTGGACGCCAGCGGGTTTCAATCCACGCCCTCGCACGGAGGGCGACCGCATGTCGGCATCGCCGAGCCGGCGGCCTTCGTGCTGTTTCAATCCACGCCCTCGCACGGAGGGCGACCTCAAGCCCGCCCTGGAGCCCATCTTCATGGGGCAGTTTCAATCCACGCCCTCGCACGGAGGGCGACGATCTCGGCCACCCGATTGTCGGCGAGGTCCTGGCGTTTCAATCCACGCCCTCGCACGGAGGGCGACCGTCCGAGTTTGGACTGCGGAACCAGTTTTCGCTGTTTCAATCCACGCCCTCGCACGGAGGGCGAC

>NZ_CP033312|1|1|1007622-1008123|PILER-CR
GTTTCAATCCAGGCCCTCGCACGGAGGGCGAC	CCGCCGCGCCCGCTCTGACCAAGCGGACGCGGACG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GAGGACGGCTTCAAACCGGCCATCGAGGTCGTCGA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCTACTACTGGCTTGAGGCACTGGACGCCAGCGG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCATGTCGGCATCGCCGAGCCGGCGGCCTTCGTGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CTCAAGCCCGCCCTGGAGCCCATCTTCATGGGGCA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GATCTCGGCCACCCGATTGTCGGCGAGGTCCTGGC
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGTCCGAGTTTGGACTGCGGAACCAGTTTTCGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC

>NZ_CP033312|1|1|1007622-1008123|CRISPRCasFinder
GTTTCAATCCAGGCCCTCGCACGGAGGGCGAC	CCGCCGCGCCCGCTCTGACCAAGCGGACGCGGACG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GAGGACGGCTTCAAACCGGCCATCGAGGTCGTCGA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCTACTACTGGCTTGAGGCACTGGACGCCAGCGG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCATGTCGGCATCGCCGAGCCGGCGGCCTTCGTGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CTCAAGCCCGCCCTGGAGCCCATCTTCATGGGGCA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GATCTCGGCCACCCGATTGTCGGCGAGGTCCTGGC
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGTCCGAGTTTGGACTGCGGAACCAGTTTTCGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC

>NZ_CP033312|1|1|1007622-1008123|CRT
GTTTCAATCCAGGCCCTCGCACGGAGGGCGAC	CCGCCGCGCCCGCTCTGACCAAGCGGACGCGGACG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GAGGACGGCTTCAAACCGGCCATCGAGGTCGTCGA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCTACTACTGGCTTGAGGCACTGGACGCCAGCGG
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGCATGTCGGCATCGCCGAGCCGGCGGCCTTCGTGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CTCAAGCCCGCCCTGGAGCCCATCTTCATGGGGCA
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	GATCTCGGCCACCCGATTGTCGGCGAGGTCCTGGC
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC	CGTCCGAGTTTGGACTGCGGAACCAGTTTTCGCT
GTTTCAATCCACGCCCTCGCACGGAGGGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033312.1\|WP_059398903.1\|1000789_1001368_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|223813
NZ_CP033312.1\|WP_079285540.1\|1005637_1006387_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270248
NZ_CP033312.1\|WP_035671741.1\|1018612_1018903_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP033312.1\|WP_051140115.1\|1020634_1021303_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP033312.1\|WP_014239544.1\|999312_999522_+\|dodecin-family-protein	unknown	unknown	gnl\|CDD\|225896
NZ_CP033312.1\|WP_149150305.1\|1015391_1016075_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP033312.1\|WP_059398904.1\|999582_1000809_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP033312.1\|WP_035671715.1\|998764_999220_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP033312.1\|WP_149150306.1\|1016104_1017040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033312.1\|WP_035671728.1\|1008913_1011229_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP033312.1\|WP_035671737.1\|1014409_1015378_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP033312.1\|WP_051140109.1\|1006426_1007389_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP033312.1\|WP_035671731.1\|1011899_1012607_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP033312.1\|WP_035671720.1\|1002729_1004418_+\|trehalose-synthase	unknown	unknown	gnl\|CDD\|200473
NZ_CP033312.1\|WP_059398902.1\|1001358_1002534_-\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP033312.1\|WP_035671751.1\|998401_998680_+\|nucleotidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP033312.1\|WP_149150307.1\|1017057_1017540_+\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP033312.1\|WP_035671734.1\|1012603_1014403_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP033312.1\|WP_035671740.1\|1017562_1018606_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP033312.1\|WP_035671722.1\|1004785_1005472_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	unknown	unknown	gnl\|CDD\|235119

Protein	Function_ID	Function_description	E-value
NZ_CP033312.1\|WP_059398903.1\|1000789_1001368_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	1.75782e-66
NZ_CP033312.1\|WP_079285540.1\|1005637_1006387_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270248	cd13530, PBP2_peptides_like, Peptide-binding protein and related homologs; type 2 periplasmic binding protein fold. This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBP2 proteins share the same architecture as periplasmic binding proteins type 1, but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	5.88199e-31
NZ_CP033312.1\|WP_035671741.1\|1018612_1018903_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.96216e-33
NZ_CP033312.1\|WP_051140115.1\|1020634_1021303_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.74286e-15
NZ_CP033312.1\|WP_014239544.1\|999312_999522_+\|dodecin-family-protein	gnl\|CDD\|225896	COG3360, COG3360, Uncharacterized conserved protein [Function unknown].	3.68579e-30
NZ_CP033312.1\|WP_149150305.1\|1015391_1016075_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.25588e-44
NZ_CP033312.1\|WP_059398904.1\|999582_1000809_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	3.9092e-78
NZ_CP033312.1\|WP_035671715.1\|998764_999220_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	1.20582e-57
NZ_CP033312.1\|WP_035671728.1\|1008913_1011229_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.32933e-58
NZ_CP033312.1\|WP_035671737.1\|1014409_1015378_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.36697e-143
NZ_CP033312.1\|WP_051140109.1\|1006426_1007389_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.47996e-48
NZ_CP033312.1\|WP_035671731.1\|1011899_1012607_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.50735e-109
NZ_CP033312.1\|WP_035671720.1\|1002729_1004418_+\|trehalose-synthase	gnl\|CDD\|200473	cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase. Trehalose synthetase (TreS) catalyzes the reversible interconversion of trehalose and maltose. The enzyme catalyzes the reaction in both directions, but the preferred substrate is maltose. Glucose is formed as a by-product of this reaction. It is believed that the catalytic mechanism may involve the cutting of the incoming disaccharide and transfer of a glucose to an enzyme-bound glucose. This enzyme also catalyzes production of a glucosamine disaccharide from maltose and glucosamine. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP033312.1\|WP_059398902.1\|1001358_1002534_-\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.063e-17
NZ_CP033312.1\|WP_035671751.1\|998401_998680_+\|nucleotidyltransferase-family-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	3.12171e-23
NZ_CP033312.1\|WP_149150307.1\|1017057_1017540_+\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.30826e-24
NZ_CP033312.1\|WP_035671734.1\|1012603_1014403_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP033312.1\|WP_035671740.1\|1017562_1018606_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP033312.1\|WP_035671722.1\|1004785_1005472_+\|3,4-dihydroxy-2-butanone-4-phosphate-synthase	gnl\|CDD\|235119	PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional.	1.27454e-120

>NZ_CP033312.1|WP_051140109.1|1006426_1007389_+|serine-hydrolase
MVAKDGRIVYHRAAGHADREAGTEMREDAIFRLASVTKPFVTAAAMRLAENGRLDLDAPVARWLPDFRPTLPDGSIPDITIRQLLTHTSGLGYAFREPAEGPYHRLNVSDGLDQPGLSLEESLARLSAAPLHFAPGTGWRYSLGIDDTGFPVHAPSRLAKAYADGNPEPVPMTDGMAVPLMGLAATFAPSRIFDASSYPSGGAGMAGTASDVLRFLEAIRTGGGPILKPETVGLMVHDQVGATAQTQGPGWGFGYGWAVLDDPALTGTPQAAGTLQWGGAYGHSWFIDRKNGLSVVALTNTAFEGMAGAFPTDVRNAVYE
>NZ_CP033312.1|WP_079285540.1|1005637_1006387_+|transporter-substrate-binding-domain-containing-protein
MRTTVRVCLAGVARLLVVALILASAPARAENWTVASEDYFPPYNFTERGKRTGMDTEIVDAMLKDIGVYPVHRPMAWPEVVRAHDENAVDVAFQFFTSPRRLERGHLIGPYRVGATVLMVRSNSEITYTGIDDLRGLRIGVVDGFEYTPEFDKSSLFEKVRSSSNVVSFRRLLLGRVDAIAGDLQVLRYLADSEGRTGSVKILPTPLAMVPRYISVPKLRAEKAERLQAAYEKLKRDGTIDAIVRRWER
>NZ_CP033312.1|WP_035671722.1|1004785_1005472_+|3,4-dihydroxy-2-butanone-4-phosphate-synthase
MNQTFASNPLSSTSSAGLLDRFGTAEERVIRAVEAIRQGGGVVVVDDEDRENEGDVIYAAETITAEQMALLIREGSGIVCLILTDADARRLDLPPMVGSNTARFGTAFTVSIEAREGVSTGVSAADRVTTIRTAIADGCRPEDLARPGHVFPIRAHAGGLAARRGHTEATIELTTLAGRRPAGVLCEVMNPDGTMARLPELVAFAERHGMPVVTIEDLVGAMRLRAAA
>NZ_CP033312.1|WP_035671720.1|1002729_1004418_+|trehalose-synthase
MIKDLWYKNAVIYNLSLGTFMDANGDGIGDFQGLQRRLDYLQGLGVTCVWLGPFQPSPMRDHGYDVADYYNVDPRYGTLGDFVEFSHACKQRGIRLIIDLVVNHTSDQHPWFQAARKDPGSPYRDWYVWSDKKPSDADQGVVFPGVQKTTWSWDKEARAYYFHRFYEFQPDLNTANPEVQAELLKVMGFWIELGVSGFRMDAVPFVIATKGPDVKKPKQQFDMLRTFREFVQWRCGDAVLLAEANVLPTVDQEYFGDDGDRMQMVFNFQVNQTLFYALATADTRPLAKALDVTRVPRPSTNQWGLFLRNHDELDLGRLTEAQRKRVFDAFGPDKDMQLYDRGIRRRLAPMLRGDRRWLELAYSLLFTLPGTPVLRYGDEIGMGDDLSLPERECARTPMQWSNEPQGGFTKADDPVHPVISGGAYGYERINAAHQRREPSSLLNWTERIIRMRKECPEIGWGDFQVLPTGSNAVLAIRYDWRNNSVLVVHNLDDRPHEVVLAVDGAGKSPRLVNLLAEDHNDPEEDGRHRLVLEPYGYRWYRLGGLDYLLRRTEGPVGGAKRS
>NZ_CP033312.1|WP_059398902.1|1001358_1002534_-|calcium-binding-protein
MKRAMRQNAPQNSGTQTTTTQAVSYAYGNNAGALAAAPAAPVPTSFAPVTINYAETRADGGFGWDVKYDLGFDGTAFTVQTRIHLTGDDAGSLKQVWEQGIEGIWGDKYSLSDGTNSYAIRFDVQFVAAGTQHYNVNVSNSYGRCDMLNWCTQTDWGPDYQDELAAHEFGHMIGAFDEYAGGATYGNFAATGTIMSDLTPTLRPNYMNSIDYYAEQFTGKTFQIVEMPKNLTLTGNTWADSLYGGAGNDTLSGLSGNDQLFGGAGNDLLWGDAGNDTLRGQAGNDALHGGSGADLLMGDEGNDTLWGDAGNDTLWGGSGADLFVFTRGGGQDRIADFSRAQNDRIQIASNMTYRLGSDGSGSALLDFGGGDRLTLAGIAPNQVTSAFFTYG
>NZ_CP033312.1|WP_059398903.1|1000789_1001368_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIVGGKHRGRRLAAPGGSDTRPTTDRTRESLFNILSHADWGPDGADLLEGAVVVDAFCGTGALGLEALSRGAAHASFLDLGRAALDAVRANVAALGEGANAAILRADATRPPPPPGRPCTLAFLDPPYGQDLAPRALAGLTKAGWLAPGAVLVVEVAGRDPLPLPPGFAELDERRYGDTRVQFLRYGMPQP
>NZ_CP033312.1|WP_059398904.1|999582_1000809_+|rRNA-pseudouridine-synthase
MDTPDFEHSKAMPGAADADAGEPDAGERIAKRLARAGLCSRRDAERWITDGRVAVNGTTLDSPACVVRSGDVVQVDGKVIPEPEPARLWRYYKPSGLVTTARDEKGRTTVFERLPPDMPRVISVGRLDLTTEGLLLLTNDGELARFLELPATGWTRRYRVRVFGEVNEVKLAELAKGPTIEGVKYGPIEAVLDRIQGRNAWLTVSLKEGKNREIRKVMEALDLQVNRLIRVAYGPFQLGKLEESAVEEVPKRVVREQVSRFFTGADPAEEGKAKGKTSAAKTATKSESAGAEGAKGRSAAPAKAAKPRDAKAGWAKAEPKAASDRRGPAKPASGGYASGKPASNKPASARMDGKPAGKPGTLTLKGGKPGGGGKPGPKPRGAGGAGGASGGGASGGRGPERTRADRRR
>NZ_CP033312.1|WP_014239544.1|999312_999522_+|dodecin-family-protein
MSNHVYKKVEIVGTAETTIDDAIRNGIERASKTLKNVDWFEVGEIRGHVSGGKVAHFQVVMKVGFRLEE
>NZ_CP033312.1|WP_035671715.1|998764_999220_-|nucleoside-deaminase
MSRPPSPMDIAFDEAEAAASRGEVPVGAVLVDPATGAVLARAGNRTEELNDPTAHAEVLAIRAACAALGEPRLPGLDLYVTLEPCALCAAAISFARLRRVYFGAYDPKGGGVVHGPRFYHQPTCHHAPDVYGGIDETRAGEMLREFFRGRR
>NZ_CP033312.1|WP_035671751.1|998401_998680_+|nucleotidyltransferase-family-protein
MPAGVSAEDIKALASRFGAGNLRVFGSRATGRARPGSDLDLLVELEPGRDLFDLIELKHALEERTGAAVDVVTERGLSPYMRDGILQSARSL
>NZ_CP033312.1|WP_035671728.1|1008913_1011229_+|CRISPR-associated-endonuclease-Cas3''
MAKNVHAHSVFGQSEDAWEPLADHLKAVASKAAELAAPFGGGGVAEAMGALHDAGKANPAFQAYIRGLGPGVDHSTAGAVIAAERYGPVLGRMMAFGIAGHHAGLANGRIPGGGLSSLNDRLAGCRPHRLEPEQDVAPAGADLSAPVLSEGFSHSFSLPFLIRMLFSCLIDADRLETERFYAEFRKEEVDRGCPLTIGDLRGRLDRHLSRFEGESGPVNALRAEVLAAARAGSEQAPGLFSLTVPTGGGKTLASLAFALDHAERHNLRRVIYVIPFTSIVEQTADVFRTALGDRDAVQEHHSGFDFGPGPDKGKRAADDSEEEGRDGIAKLRRAAENWDRPIVVTTAVQFFESLFSNRTSPCRKLHAIAGSVVILDEAQTLPLKYLLPCLEALRELARGYRTSVVLCTATQPAVTVDSGFKGGLERVRELAPDPQGLYRRLKRVTVERIREPLGDEELAERLRAERQVLCIVNNRRHARDLLRQVANGLNEPRSARHLSTCLCAAHRRAELAAIRKDLKSGAPVRLVATSLVEAGVDFSFPTVYRALAGLDSIAQAAGRCNRNGELPEPGRVFVFSSPEGENRKPPPELSQFAEVAASILRTHDDPLGLDTIRAYFQRLYWQRGREELDAALVGEGAEPIKGILEALRLYQRGQDYPFADIAKAFRIIESPLVPVIVPYGPADDPDAVPRLLRNLDHVSAEKTGGIARALQPYLVQIPRSARNALIAAGAAEYVRKGEFGEQFVRLVNDDLYHPDVGLDWDDPTFRNLDLF
>NZ_CP033312.1|WP_035671731.1|1011899_1012607_+|type-I-C-CRISPR-associated-protein-Cas5
MAYGVKLHVWGERACFTRPEMKVERMSYDIMTPSAARGILEAIHWKPAIRWVIDAIHVLKPIRFQSIRRNEVSGLVPKSFVTAAMKAGAVHDLRMDAAENRQQRAATVLVDVAYVIEAHFDLTDRAGAEDTPAKHLSMFNRRAAQGQCFHQPCFGTREFPAHFALLDGDLPPSALPDDQRNRDLGWMLLDMRHDRDSRVGNQHCCTAHCTPLFFHAALRDGAVAVPPPESVEVRS
>NZ_CP033312.1|WP_035671734.1|1012603_1014403_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MTLFAALNGYYDRLAERGDVPPFGFSMERISYAVVLSSGGEPVEVTDLRILSGKKPKPRPLMVPQFFGRSGTKPPPYFLCDHTRFLFGVGADKATGARAASPAYFAAFKERHLAAIDGSNDEGLVALRNFLTHWTPDAFRAPLFDDAMLDQYMVFMLDGDRNAAGQPRFLHDRPAARRLWEKELAAKKGDEGFCLVTGEWGPVTALHPLIKGVWGAQVGGARIVSFNSNAFTSYAKSDGLNAPVSDAVTFGYGTALNTLLKEGSGNRLQVGDATVAFWADTSGGEKAAQKAETLFSDLLDPPRPEDAEEAQRIKDVLTPVSQGRPVREIDPMLDERTRFFILGLSPNIARLSVRFWLEDSFGAIAEHIGRHWRDLEIKPDPWRTAPSVWALLRETALMGKSDNVAPLLGGEVMRAVLTGGRYPRSLLAAVITRIRAGDEITGAKAAICKACLNRDSRLGSTKEEELPVSLNRDEANAGYRLGRLFAVLENTQRAALGKVNASIRDRYFGAASATPASVFPMLLRNSTHHLAVLRKGDKARLGGWFEGEIGEILGGLGASFPRSLRIEDQGRFAIGYYHQRYAGKTDAAIPAADTTDSED
>NZ_CP033312.1|WP_035671737.1|1014409_1015378_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MPANQKSPIQNRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNKGLVTDVCLKRKIRNYAALSRDGEPRYGIYVQEGAILNEKHRAAYAAVRPDDKDVATAKKLSPKGEEETAVRRFMCDNFFDVRSFGAVMSTSINCGQVRGPVQMSFAHSVEPILPLEISITRMAATSEKELKERKEGEAAEDERRENRTMGRKHVVPYGLYRSHGYISASLAGRTGFDEDDLELLWTALEQMFDHDRSAARGEMAGRRLFLFRHDSVLGNAPAHRLFDLVTVKRRFQGADYDLDGGGLDNLPPARRFADYTVSADTAGVPAGVTLIEKF
>NZ_CP033312.1|WP_149150305.1|1015391_1016075_+|CRISPR-associated-protein-Cas4
MDAAPMDTDDLLPLSALQHHLFCPRQCALIHVERQWRENRLTAEGRLLHESVDAGGREVRGGVRTVRSMPLRSHRLGLAGVADVVELHGPERRPFPVEYKRGRPKAHRADEVQLCAQAICLEEMFGTAIAEGALFYGETRRRVAVALDAALRDLTERTAAAVREMVRTGTTPPPVYEARKCQSCSMLDLCRPRRLSHPPAVALWLARQLGEPDRPEGDGDRVPARSR
>NZ_CP033312.1|WP_149150306.1|1016104_1017040_+|hypothetical-protein
MLFEDDSIDAIEQSSVAFTISGGEAGAGFTWTITSAGGGQVTGSGVMSGPTMRVTGLDLSGLGDGTLTLTLGLTDPAGNASAPFTATTQKLTATVEKPAPIAPPPVATVDGATVNGSITTGDDGKRVTTVTIAASNEERVEDSSTANADLADVPVVREQVVDRQTGAVSTVTTLTVSVASGVAVTTSGSAERQTAAEAQTGLSGLIAAIEARTDTGTASRGNLTGGGSGFLSVLSAQAQLLVRAIDFSAPGVAAGQAVQTKVTGNTLGGTGTASTAPTAVVLNTTAVAGPVTIQLDNVEFAAVVGAATLVG
>NZ_CP033312.1|WP_149150307.1|1017057_1017540_+|calcium-binding-protein
MEFAAVVGAATLVGGDGEQIVYGDDHEQFMYLGAGDDILHGGGGNDTIASAGGNDTLYGDDGDDVVMGGEGDDWLFGGEGNDLVGGGVGNDALFGGTGQDILFGEDGDDTLSGEEGDDTLSGGSGNDLLFGGDVALWLARQLGEPDRPEGDGETADTRSP
>NZ_CP033312.1|WP_035671740.1|1017562_1018606_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQHLNTLFITTDGAWLRKDGANIVVEVERAEIGRVPIHMMGGIVCFGRVGMSPPLMGHCAESGVAVSFLSEHGKFMARVEGPCSGNVLLRRRQYRIADDPAAGLVIVRAIVAAKAANQRAVLRRALRDHGTGRSQDAGHARLDDAQRRLGDVARRVAEAPDIDAARGHEGDAANAYFGVFDHLVRRTDGTFRFGGRSRRPPLDPCNALLSFLYAILGHDCRSALESVGLDPQVGFLHRDRPGRASLALDLMEEFRSTLADRVALTLINRQQLGEKDFIRMDGGAVLLRDDSRKAVLTAYQERKKDEITHPFLNEKVSLGLVPHIQAQLLARHLRGDLDGYPPFLWK
>NZ_CP033312.1|WP_035671741.1|1018612_1018903_+|CRISPR-associated-endonuclease-Cas2
MLMLITYDVNTQDASGRRRLRRVARACQDFGQRVQFSVFECDVDPAQWAVLRARLIGEINQETDSLRFYHLGANAARRIEHVGAKPVLDLGGALIF
>NZ_CP033312.1|WP_051140115.1|1020634_1021303_+|TetR/AcrR-family-transcriptional-regulator
MTESFPAGVRAGRPSKEGTVETSNRIIDITAQLFAAQGFAATSIKQVASACGTGEDAIYRHFPSKAALFEAVVERMRVRTLDGLETEIDSAGGEGDALSRLKRVARWFLTVNLEPDMVALNRIALSEAILHGEDRRDEGESDPITDRLVALVAAAQWDGKLGGDDPRVIAAHLLHSIVLGPSNDAMLGRATYASTEAQGRFFDQAWALFLRGAGRSLPAGAR

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Crispr_ID: NZ_CP033312_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033312_2

1019074-1020177

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCCCTCGCACAGAGGGCGAC	PILER-CR
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	CRISPRCasFinder
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CRT

16 spacers

cas2,cas1,cas4,cas7b,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP033312_2

>merge|NZ_CP033312|2|1019074-1020177|PILER-CR,CRISPRCasFinder,CRT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAACCATCCCCTCTCAGTACAAGATCGTCCAGCTCACGGCCGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACAGGAAGGTGTGCACGCTCGCCCCAACGCACGTCACGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACTGCTGCCAGCGTGGGCATGGCACGTTTCGGCGCGGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACTGGCGCTCGGTCGATCCATGGCGGTAGACCCGCATGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACTTGCGGCAAATGTCAGCGAGCTTCGTCATGGGCGCGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACGCTAACCACTATCGAAACTCTAGCTTCACGGCGGTCGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACACAAGTCCGGCCTCATGAAGTCCTGGGGCGGCCTGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACCCTCCTCATCTGGCCCCTCAGGCGAGGATGGCGCGGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACACGATCCTGTGGGGGCGGGAGTGGCCGCGGAGTTTCGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACACGCTCCAGGCCGGGGACAGCCTGGGCACCGGACGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACCGGGCTGGCCGGGGCGGCGTGTTGCTCGGCAGCGGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACAGTGCGGTCGCGATGCTCGACGCCACGCCGTTGAGGGTCGCCCTCTGTGCGAGGGCGTGGATTGAAACACCGTCGTGTGGATGGACTTCGACGCCGCCAAGGCGTCGCCCTCCGTGCGAGGGCGTGGATTGAAACACCTTCCACACAGCGGCCTGCTTCCAGGCGTCGTGTCGCCCTCCGTGCGAGGGCGTGGATTGAAACGCCACCTGCACCGGGTCCGTGCTGGACTTCACAACGTCGCCCTCCGTGCGAGGGCGTGGATTGAAACTTGTAGCGGTGGGCCTCGTCGACGAACAGGCAGTAGTCGCCCTTCGTGCGAGGGCTGCTTCCTCAAG

>NZ_CP033312|2|2|1019074-1020110|PILER-CR
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CATCCCCTCTCAGTACAAGATCGTCCAGCTCACGGCC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGGAAGGTGTGCACGCTCGCCCCAACGCACGTCAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGCTGCCAGCGTGGGCATGGCACGTTTCGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGGCGCTCGGTCGATCCATGGCGGTAGACCCGCAT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TTGCGGCAAATGTCAGCGAGCTTCGTCATGGGCGC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	GCTAACCACTATCGAAACTCTAGCTTCACGGCGGTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACAAGTCCGGCCTCATGAAGTCCTGGGGCGGCCT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CCTCCTCATCTGGCCCCTCAGGCGAGGATGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGATCCTGTGGGGGCGGGAGTGGCCGCGGAGTTTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGCTCCAGGCCGGGGACAGCCTGGGCACCGGAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CGGGCTGGCCGGGGCGGCGTGTTGCTCGGCAGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGTGCGGTCGCGATGCTCGACGCCACGCCGTTGAGG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACCGTCGTGTGGATGGACTTCGACGCCGCCAAGGC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	ACCTTCCACACAGCGGCCTGCTTCCAGGCGTCGT
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	GCCACCTGCACCGGGTCCGTGCTGGACTTCACAAC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC

>NZ_CP033312|2|2|1019074-1020110|CRISPRCasFinder
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CATCCCCTCTCAGTACAAGATCGTCCAGCTCACGGCC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGGAAGGTGTGCACGCTCGCCCCAACGCACGTCAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGCTGCCAGCGTGGGCATGGCACGTTTCGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGGCGCTCGGTCGATCCATGGCGGTAGACCCGCAT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TTGCGGCAAATGTCAGCGAGCTTCGTCATGGGCGC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	GCTAACCACTATCGAAACTCTAGCTTCACGGCGGTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACAAGTCCGGCCTCATGAAGTCCTGGGGCGGCCT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CCTCCTCATCTGGCCCCTCAGGCGAGGATGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGATCCTGTGGGGGCGGGAGTGGCCGCGGAGTTTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGCTCCAGGCCGGGGACAGCCTGGGCACCGGAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CGGGCTGGCCGGGGCGGCGTGTTGCTCGGCAGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGTGCGGTCGCGATGCTCGACGCCACGCCGTTGAGG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACCGTCGTGTGGATGGACTTCGACGCCGCCAAGGC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	ACCTTCCACACAGCGGCCTGCTTCCAGGCGTCGT
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	GCCACCTGCACCGGGTCCGTGCTGGACTTCACAAC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC

>NZ_CP033312|2|2|1019074-1020177|CRT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CATCCCCTCTCAGTACAAGATCGTCCAGCTCACGGCC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGGAAGGTGTGCACGCTCGCCCCAACGCACGTCAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGCTGCCAGCGTGGGCATGGCACGTTTCGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TGGCGCTCGGTCGATCCATGGCGGTAGACCCGCAT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	TTGCGGCAAATGTCAGCGAGCTTCGTCATGGGCGC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	GCTAACCACTATCGAAACTCTAGCTTCACGGCGGTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACAAGTCCGGCCTCATGAAGTCCTGGGGCGGCCT
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CCTCCTCATCTGGCCCCTCAGGCGAGGATGGCGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGATCCTGTGGGGGCGGGAGTGGCCGCGGAGTTTC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACGCTCCAGGCCGGGGACAGCCTGGGCACCGGAC
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	CGGGCTGGCCGGGGCGGCGTGTTGCTCGGCAGCG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	AGTGCGGTCGCGATGCTCGACGCCACGCCGTTGAGG
GTCGCCCTCTGTGCGAGGGCGTGGATTGAAAC	ACCGTCGTGTGGATGGACTTCGACGCCGCCAAGGC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	ACCTTCCACACAGCGGCCTGCTTCCAGGCGTCGT
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	GCCACCTGCACCGGGTCCGTGCTGGACTTCACAAC
GTCGCCCTCCGTGCGAGGGCGTGGATTGAAAC	TTGTAGCGGTGGGCCTCGTCGACGAACAGGCAGTA
GTCGCCCTTCGTGCGAGGGCTGCTTCCTCAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033312.1\|WP_035671746.1\|1023149_1023557_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033312.1\|WP_035671748.1\|1025556_1026138_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226995
NZ_CP033312.1\|WP_051140115.1\|1020634_1021303_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP033312.1\|WP_014239598.1\|1025061_1025322_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|181682
NZ_CP033312.1\|WP_149150305.1\|1015391_1016075_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP033312.1\|WP_035671740.1\|1017562_1018606_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP033312.1\|WP_149150306.1\|1016104_1017040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033312.1\|WP_035671728.1\|1008913_1011229_+\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP033312.1\|WP_035671731.1\|1011899_1012607_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP033312.1\|WP_035671764.1\|1021486_1021900_+\|excinuclease-ABC-subunit-A	unknown	unknown	gnl\|CDD\|223470
NZ_CP033312.1\|WP_051140109.1\|1006426_1007389_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP033312.1\|WP_035671737.1\|1014409_1015378_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP033312.1\|WP_059398898.1\|1026134_1027826_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|223442
NZ_CP033312.1\|WP_149150307.1\|1017057_1017540_+\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP033312.1\|WP_035671771.1\|1024292_1025075_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP033312.1\|WP_051140111.1\|1021966_1023070_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP033312.1\|WP_104675341.1\|1025327_1025576_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|180033
NZ_CP033312.1\|WP_035671734.1\|1012603_1014403_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP033312.1\|WP_035671741.1\|1018612_1018903_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP033312.1\|WP_059398899.1\|1023571_1024303_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379349

Protein	Function_ID	Function_description	E-value
NZ_CP033312.1\|WP_059398898.1\|1026134_1027826_+\|AMP-binding-protein	gnl\|CDD\|223442	COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism].	8.02261e-36
NZ_CP033312.1\|WP_035671748.1\|1025556_1026138_+\|hypothetical-protein	gnl\|CDD\|226995	COG4648, COG4648, Predicted membrane protein [Function unknown].	2.79562e-22
NZ_CP033312.1\|WP_051140115.1\|1020634_1021303_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.74286e-15
NZ_CP033312.1\|WP_014239598.1\|1025061_1025322_+\|acyl-carrier-protein	gnl\|CDD\|181682	PRK09184, PRK09184, acyl carrier protein; Provisional.	1.46979e-27
NZ_CP033312.1\|WP_149150305.1\|1015391_1016075_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.25588e-44
NZ_CP033312.1\|WP_035671740.1\|1017562_1018606_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP033312.1\|WP_035671728.1\|1008913_1011229_+\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	5.32933e-58
NZ_CP033312.1\|WP_035671731.1\|1011899_1012607_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.50735e-109
NZ_CP033312.1\|WP_035671764.1\|1021486_1021900_+\|excinuclease-ABC-subunit-A	gnl\|CDD\|223470	COG0393, COG0393, Uncharacterized conserved protein [Function unknown].	0.00354899
NZ_CP033312.1\|WP_051140109.1\|1006426_1007389_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.47996e-48
NZ_CP033312.1\|WP_035671737.1\|1014409_1015378_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	2.36697e-143
NZ_CP033312.1\|WP_149150307.1\|1017057_1017540_+\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.30826e-24
NZ_CP033312.1\|WP_035671771.1\|1024292_1025075_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	2.08609e-37
NZ_CP033312.1\|WP_051140111.1\|1021966_1023070_+\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	3.76192e-58
NZ_CP033312.1\|WP_104675341.1\|1025327_1025576_+\|acyl-carrier-protein	gnl\|CDD\|180033	PRK05350, PRK05350, acyl carrier protein; Provisional.	6.27493e-35
NZ_CP033312.1\|WP_035671734.1\|1012603_1014403_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP033312.1\|WP_035671741.1\|1018612_1018903_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.96216e-33
NZ_CP033312.1\|WP_059398899.1\|1023571_1024303_+\|hypothetical-protein	gnl\|CDD\|379349	pfam13723, Ketoacyl-synt_2, Beta-ketoacyl synthase, N-terminal domain.	2.90193e-68

>NZ_CP033312.1|WP_035671741.1|1018612_1018903_+|CRISPR-associated-endonuclease-Cas2
MLMLITYDVNTQDASGRRRLRRVARACQDFGQRVQFSVFECDVDPAQWAVLRARLIGEINQETDSLRFYHLGANAARRIEHVGAKPVLDLGGALIF
>NZ_CP033312.1|WP_035671740.1|1017562_1018606_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MRQHLNTLFITTDGAWLRKDGANIVVEVERAEIGRVPIHMMGGIVCFGRVGMSPPLMGHCAESGVAVSFLSEHGKFMARVEGPCSGNVLLRRRQYRIADDPAAGLVIVRAIVAAKAANQRAVLRRALRDHGTGRSQDAGHARLDDAQRRLGDVARRVAEAPDIDAARGHEGDAANAYFGVFDHLVRRTDGTFRFGGRSRRPPLDPCNALLSFLYAILGHDCRSALESVGLDPQVGFLHRDRPGRASLALDLMEEFRSTLADRVALTLINRQQLGEKDFIRMDGGAVLLRDDSRKAVLTAYQERKKDEITHPFLNEKVSLGLVPHIQAQLLARHLRGDLDGYPPFLWK
>NZ_CP033312.1|WP_149150307.1|1017057_1017540_+|calcium-binding-protein
MEFAAVVGAATLVGGDGEQIVYGDDHEQFMYLGAGDDILHGGGGNDTIASAGGNDTLYGDDGDDVVMGGEGDDWLFGGEGNDLVGGGVGNDALFGGTGQDILFGEDGDDTLSGEEGDDTLSGGSGNDLLFGGDVALWLARQLGEPDRPEGDGETADTRSP
>NZ_CP033312.1|WP_149150306.1|1016104_1017040_+|hypothetical-protein
MLFEDDSIDAIEQSSVAFTISGGEAGAGFTWTITSAGGGQVTGSGVMSGPTMRVTGLDLSGLGDGTLTLTLGLTDPAGNASAPFTATTQKLTATVEKPAPIAPPPVATVDGATVNGSITTGDDGKRVTTVTIAASNEERVEDSSTANADLADVPVVREQVVDRQTGAVSTVTTLTVSVASGVAVTTSGSAERQTAAEAQTGLSGLIAAIEARTDTGTASRGNLTGGGSGFLSVLSAQAQLLVRAIDFSAPGVAAGQAVQTKVTGNTLGGTGTASTAPTAVVLNTTAVAGPVTIQLDNVEFAAVVGAATLVG
>NZ_CP033312.1|WP_149150305.1|1015391_1016075_+|CRISPR-associated-protein-Cas4
MDAAPMDTDDLLPLSALQHHLFCPRQCALIHVERQWRENRLTAEGRLLHESVDAGGREVRGGVRTVRSMPLRSHRLGLAGVADVVELHGPERRPFPVEYKRGRPKAHRADEVQLCAQAICLEEMFGTAIAEGALFYGETRRRVAVALDAALRDLTERTAAAVREMVRTGTTPPPVYEARKCQSCSMLDLCRPRRLSHPPAVALWLARQLGEPDRPEGDGDRVPARSR
>NZ_CP033312.1|WP_035671737.1|1014409_1015378_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MPANQKSPIQNRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNKGLVTDVCLKRKIRNYAALSRDGEPRYGIYVQEGAILNEKHRAAYAAVRPDDKDVATAKKLSPKGEEETAVRRFMCDNFFDVRSFGAVMSTSINCGQVRGPVQMSFAHSVEPILPLEISITRMAATSEKELKERKEGEAAEDERRENRTMGRKHVVPYGLYRSHGYISASLAGRTGFDEDDLELLWTALEQMFDHDRSAARGEMAGRRLFLFRHDSVLGNAPAHRLFDLVTVKRRFQGADYDLDGGGLDNLPPARRFADYTVSADTAGVPAGVTLIEKF
>NZ_CP033312.1|WP_035671734.1|1012603_1014403_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MTLFAALNGYYDRLAERGDVPPFGFSMERISYAVVLSSGGEPVEVTDLRILSGKKPKPRPLMVPQFFGRSGTKPPPYFLCDHTRFLFGVGADKATGARAASPAYFAAFKERHLAAIDGSNDEGLVALRNFLTHWTPDAFRAPLFDDAMLDQYMVFMLDGDRNAAGQPRFLHDRPAARRLWEKELAAKKGDEGFCLVTGEWGPVTALHPLIKGVWGAQVGGARIVSFNSNAFTSYAKSDGLNAPVSDAVTFGYGTALNTLLKEGSGNRLQVGDATVAFWADTSGGEKAAQKAETLFSDLLDPPRPEDAEEAQRIKDVLTPVSQGRPVREIDPMLDERTRFFILGLSPNIARLSVRFWLEDSFGAIAEHIGRHWRDLEIKPDPWRTAPSVWALLRETALMGKSDNVAPLLGGEVMRAVLTGGRYPRSLLAAVITRIRAGDEITGAKAAICKACLNRDSRLGSTKEEELPVSLNRDEANAGYRLGRLFAVLENTQRAALGKVNASIRDRYFGAASATPASVFPMLLRNSTHHLAVLRKGDKARLGGWFEGEIGEILGGLGASFPRSLRIEDQGRFAIGYYHQRYAGKTDAAIPAADTTDSED
>NZ_CP033312.1|WP_035671731.1|1011899_1012607_+|type-I-C-CRISPR-associated-protein-Cas5
MAYGVKLHVWGERACFTRPEMKVERMSYDIMTPSAARGILEAIHWKPAIRWVIDAIHVLKPIRFQSIRRNEVSGLVPKSFVTAAMKAGAVHDLRMDAAENRQQRAATVLVDVAYVIEAHFDLTDRAGAEDTPAKHLSMFNRRAAQGQCFHQPCFGTREFPAHFALLDGDLPPSALPDDQRNRDLGWMLLDMRHDRDSRVGNQHCCTAHCTPLFFHAALRDGAVAVPPPESVEVRS
>NZ_CP033312.1|WP_035671728.1|1008913_1011229_+|CRISPR-associated-endonuclease-Cas3''
MAKNVHAHSVFGQSEDAWEPLADHLKAVASKAAELAAPFGGGGVAEAMGALHDAGKANPAFQAYIRGLGPGVDHSTAGAVIAAERYGPVLGRMMAFGIAGHHAGLANGRIPGGGLSSLNDRLAGCRPHRLEPEQDVAPAGADLSAPVLSEGFSHSFSLPFLIRMLFSCLIDADRLETERFYAEFRKEEVDRGCPLTIGDLRGRLDRHLSRFEGESGPVNALRAEVLAAARAGSEQAPGLFSLTVPTGGGKTLASLAFALDHAERHNLRRVIYVIPFTSIVEQTADVFRTALGDRDAVQEHHSGFDFGPGPDKGKRAADDSEEEGRDGIAKLRRAAENWDRPIVVTTAVQFFESLFSNRTSPCRKLHAIAGSVVILDEAQTLPLKYLLPCLEALRELARGYRTSVVLCTATQPAVTVDSGFKGGLERVRELAPDPQGLYRRLKRVTVERIREPLGDEELAERLRAERQVLCIVNNRRHARDLLRQVANGLNEPRSARHLSTCLCAAHRRAELAAIRKDLKSGAPVRLVATSLVEAGVDFSFPTVYRALAGLDSIAQAAGRCNRNGELPEPGRVFVFSSPEGENRKPPPELSQFAEVAASILRTHDDPLGLDTIRAYFQRLYWQRGREELDAALVGEGAEPIKGILEALRLYQRGQDYPFADIAKAFRIIESPLVPVIVPYGPADDPDAVPRLLRNLDHVSAEKTGGIARALQPYLVQIPRSARNALIAAGAAEYVRKGEFGEQFVRLVNDDLYHPDVGLDWDDPTFRNLDLF
>NZ_CP033312.1|WP_051140109.1|1006426_1007389_+|serine-hydrolase
MVAKDGRIVYHRAAGHADREAGTEMREDAIFRLASVTKPFVTAAAMRLAENGRLDLDAPVARWLPDFRPTLPDGSIPDITIRQLLTHTSGLGYAFREPAEGPYHRLNVSDGLDQPGLSLEESLARLSAAPLHFAPGTGWRYSLGIDDTGFPVHAPSRLAKAYADGNPEPVPMTDGMAVPLMGLAATFAPSRIFDASSYPSGGAGMAGTASDVLRFLEAIRTGGGPILKPETVGLMVHDQVGATAQTQGPGWGFGYGWAVLDDPALTGTPQAAGTLQWGGAYGHSWFIDRKNGLSVVALTNTAFEGMAGAFPTDVRNAVYE
>NZ_CP033312.1|WP_051140115.1|1020634_1021303_+|TetR/AcrR-family-transcriptional-regulator
MTESFPAGVRAGRPSKEGTVETSNRIIDITAQLFAAQGFAATSIKQVASACGTGEDAIYRHFPSKAALFEAVVERMRVRTLDGLETEIDSAGGEGDALSRLKRVARWFLTVNLEPDMVALNRIALSEAILHGEDRRDEGESDPITDRLVALVAAAQWDGKLGGDDPRVIAAHLLHSIVLGPSNDAMLGRATYASTEAQGRFFDQAWALFLRGAGRSLPAGAR
>NZ_CP033312.1|WP_035671764.1|1021486_1021900_+|excinuclease-ABC-subunit-A
MIVTANFPALARDERLMFPVEAALSTAAAQGKLDRGVRLYFGDQKHPKTVANLGEWATNKKTNAFNKSDREACEWVFLSAVLELQERARKQGGDAVINIKSNYKNTETVSSTEYMCGAGSIMAGVALKGTVVKLGAK
>NZ_CP033312.1|WP_051140111.1|1021966_1023070_+|alpha/beta-hydrolase
MRRRLLLAAAFAAAALTGACTADPPPPPPAVTATPVLTGGAMIANDGAPIPLHTWPAESALRAVIVAVHGMNDYGLAFDRPARLWARAGIATYAIDQRGFGKAMERGHWYGGERMADDVVALSRLARERHPGVPVYLLGESMGGAVVVLAAARAERGLLSGIVLSAPAVWGTGFRATVTLDAAMILGSLVPDMTVPPLRVATPSTDDPMVLRRMREDPLIIHRTRFQTLAGIVDLMHDARFEARKVDVPVLLMLGDLDVHVPRDGVAALAKSLPPDTRIALYPKGRHLLMRTLDGDRVTQDVAAWVSDTRRALPSGADARAQACPALMTRPHRGCPPPRAAAPRPPKPAIDGKTGNRLPTPATAPQN
>NZ_CP033312.1|WP_035671746.1|1023149_1023557_+|hypothetical-protein
MTLKTGIRALFLILATLAVLGGCNRRQPIYRVTDQPIPAASRDLPAAALQRTIMEAAIDRGWSAEWKAPGEILATKAWKDHEAVVEIRYSHESYTIDHVSTTNLLEHGETVHHAYNKLVRALEDEIERRLRQAKH
>NZ_CP033312.1|WP_059398899.1|1023571_1024303_+|hypothetical-protein
MTETLRVAIRGWCAWAPDRSTRAAWRDWAGAPAMPDDAPPPALPMMLRRRTSPIGQKLIAAALACGDAAHTARYVLASGHGELARTVGIIDSLRQGELPSPAEFSLSVHHGLAGLLSIHTGNRRGHTALAAGPDSFGFGLLEAAASVVETPSEPVLLLYADAPMPDEYAPFHTAADEALPLAVALALGPADGEGEGLALRCAPATGEPPAESTALDFLRFLLSGAPQAASHGARIDWVWRRAD
>NZ_CP033312.1|WP_035671771.1|1024292_1025075_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MLTRFLDRLWRRAATGFAFAFLFGGGAILAPTVFPLVALTSPAGAVRRQRCQHLVHLIFRFYIRMLRVLRVIDLKVEGAERLRDGRGKLVVANHPSLLDVVLLMALMPRAQCIVKKELWESRWLGGMVRGAGYIRNDLDPEALLDACRAALEAGDGLIIFPEGTRTVPGEPVRFRRGFANLATLLEAEVQPVTITCDPPTLIKGEKWWMIPPRRPIFRVMVGDRLDVTGLLGYQYRSLAARKLVRSLEDYFAERLADGKA
>NZ_CP033312.1|WP_014239598.1|1025061_1025322_+|acyl-carrier-protein
MEKLERELKTLIVDALKLEDIAPEEIDSEEPLFNDGLGLDSIDALELGVALRKAYGIKIESVTDDVKQHFANVRSLARFIQSQRAE
>NZ_CP033312.1|WP_104675341.1|1025327_1025576_+|acyl-carrier-protein
MLTPDEIYARLQSYLEDMFEVPPEKISREARLFEDLDLDSIDAVDLVVKLQELTGRKFKPEEFKSVRTVGDVLDRVHALLQE
>NZ_CP033312.1|WP_035671748.1|1025556_1026138_+|hypothetical-protein
MPSSRNRLPPFGVAALVVAGALYPVLVYGGRALVPPLAFVAVALALIGARFAICSSPAARVWRLPLAAAAVLVGVLAALDGALAAKAYPVALSLGTAAVFGASLLRPPSLVERFARLQEPDLPPAGQAYCRTVTVVWTVWLVANAAVAGALALWGSDEAWALWTGLIAYIVMGLLFGGEVLIRRSMRRRHAGA
>NZ_CP033312.1|WP_059398898.1|1026134_1027826_+|AMP-binding-protein
MTAIPLSRLLAVGRPDDAPVADDVTFARFRADVAGNAARLKGCRRGLLVAPDGYWGAVGLLALLHAGAEVTIPPNAQPGTLAALTADGAVPVGGDLGGNLGPGGEGMALAPLDPGTPLTFFTSGSTGEPKRVVRTLGMLEADALATESVLGRLAGPSARVHATVPHQHVYGLNFRLLWPLVTGRPFASAMHELWETALAALDAGSVLVTSPAHLTRLAGIAPLPPSRRPALVLSAGAPLPEPAAREAAAIFGTPVTEIFGSTETGAIAHRRREAGDPSWRPLPGVVAGRTPDGRLRVGATHVEGGEHVGSDLVEMTEDGGFRVLGRADRIAKVEGKRVSLPEVEAQLRRSPLVADAAALMLEQLCAVVVPSAEGAARLADLGAFRFGRLLRRELSAVQEPAGLPRRWRFVSRLPDGALGKRRHADIAALFEESALPEIALSEIATHRPTAPDVRAVRPLADGVELDLFIPGDLAQLDGHFPGMPIVPGVAQIDWAVTFANTHLGLGIEVAQSLQVKFRRVTVPDTMVTLALRHAPARRRLTFEYRCGDETLSSGSIGVEGIAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP033312_1	1.1\|1007654\|35\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1007654-1007688	35	NZ_CP033314.1	124976-125010	0	1.0

1. spacer 1.1|1007654|35|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to position: 124976-125010, mismatch: 0, identity: 1.0

ccgccgcgcccgctctgaccaagcggacgcggacg	CRISPR spacer
ccgccgcgcccgctctgaccaagcggacgcggacg	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP033312_1	1.1\|1007654\|35\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1007654-1007688	35	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	287185-287219	0	1.0
NZ_CP033312_1	1.1\|1007654\|35\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1007654-1007688	35	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	761415-761449	0	1.0
NZ_CP033312_1	1.1\|1007654\|35\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1007654-1007688	35	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	293200-293234	1	0.971
NZ_CP033312_2	2.7\|1019510\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019510-1019543	34	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	169515-169548	7	0.794
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	NZ_CP049749	Rhodococcus fascians A21d2 plasmid pA21d2, complete sequence	133392-133426	7	0.8
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	MN657140	Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence	23416-23450	7	0.8
NZ_CP033312_2	2.10\|1019711\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019711-1019744	34	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	436454-436487	8	0.765
NZ_CP033312_2	2.11\|1019777\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019777-1019810	34	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	362344-362377	8	0.765
NZ_CP033312_2	2.11\|1019777\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019777-1019810	34	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	519978-520011	8	0.765
NZ_CP033312_2	2.11\|1019777\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019777-1019810	34	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	311129-311162	8	0.765
NZ_CP033312_2	2.11\|1019777\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019777-1019810	34	NZ_AP014810	Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence	29450-29483	8	0.765
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	MK937591	Microbacterium phage Cinna, complete genome	24557-24591	8	0.771
NZ_CP033312_1	1.4\|1007855\|37\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1007855-1007891	37	NZ_CP018784	Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence	373578-373614	9	0.757
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	AX955019	Sequence 1 from Patent WO03093461	19259-19293	9	0.743
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	NZ_CP051294	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence	169471-169505	10	0.714
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	NZ_CP033363	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence	169471-169505	10	0.714
NZ_CP033312_2	2.16\|1020111\|35\|NZ_CP033312\|CRT	1020111-1020145	35	MG641885	Salmonella phage PMBT28, complete genome	27344-27378	10	0.714
NZ_CP033312_2	2.10\|1019711\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019711-1019744	34	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1357567-1357600	11	0.676
NZ_CP033312_2	2.10\|1019711\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019711-1019744	34	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	488365-488398	11	0.676
NZ_CP033312_2	2.10\|1019711\|34\|NZ_CP033312\|PILER-CR,CRISPRCasFinder,CRT	1019711-1019744	34	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	774802-774835	11	0.676

1. spacer 1.1|1007654|35|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ccgccgcgcccgctctgaccaagcggacgcggacg	CRISPR spacer
ccgccgcgcccgctctgaccaagcggacgcggacg	Protospacer
***********************************

2. spacer 1.1|1007654|35|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ccgccgcgcccgctctgaccaagcggacgcggacg	CRISPR spacer
ccgccgcgcccgctctgaccaagcggacgcggacg	Protospacer
***********************************

3. spacer 1.1|1007654|35|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 1, identity: 0.971

ccgccgcgcccgctctgaccaagcggacgcggacg	CRISPR spacer
ccgccgcgcccgctctgaccaagcggacgcggccg	Protospacer
******************************** **

4. spacer 2.7|1019510|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 7, identity: 0.794

acaagtccg---gcctcatgaagtcctggggcggcct	CRISPR spacer
---aggccgggcgcctggtgaagtcctggggcggccc	Protospacer
   ** ***   **** .******************.

5. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to NZ_CP049749 (Rhodococcus fascians A21d2 plasmid pA21d2, complete sequence) position: , mismatch: 7, identity: 0.8

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
ttgaactcgtgggcttcgtcgacgaacaggtagtc	Protospacer
*** * . ******.***************.***

6. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to MN657140 (Cryobacterium sp. strain ANT_H26B plasmid pA26BH1, complete sequence) position: , mismatch: 7, identity: 0.8

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
ttgaattcgtgggcttcgtcgacgaacaggtagtc	Protospacer
*** * . ******.***************.***

7. spacer 2.10|1019711|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.765

acgctccaggccggggacagcctgggcaccggac--	CRISPR spacer
cagatcgaggccggggccagcctgggcat--gaccg	Protospacer
  * ** ********* ***********.  ***

8. spacer 2.11|1019777|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 8, identity: 0.765

cgggctggccggggcggcgtgttgctcggcagcg	CRISPR spacer
gcggcctatcggggcggcgggctgctcggcagcg	Protospacer
  ***. ..********** *.************

9. spacer 2.11|1019777|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 8, identity: 0.765

cgggctggccggggcggcgtgttgctcggcagcg	CRISPR spacer
acggtcggccggggcggcatgtcgctcggcaagg	Protospacer
  **..************.***.********. *

10. spacer 2.11|1019777|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.765

cgggctggccggggcggcgtgttgctcggcagcg	CRISPR spacer
cgtttcgatcggggcgccgagttgctcggcagcg	Protospacer
**  ..*..******* ** **************

11. spacer 2.11|1019777|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014810 (Methylorubrum populi strain P-1M plasmid pMPPM01, complete sequence) position: , mismatch: 8, identity: 0.765

cgggctggccggggcggcgtgttgctcggcagcg	CRISPR spacer
cgcacgggccggggcggcgcggtgctcggccttg	Protospacer
** .* *************.* ********  .*

12. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to MK937591 (Microbacterium phage Cinna, complete genome) position: , mismatch: 8, identity: 0.771

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
aggtagcggcgggcctcgtccacgaacggcgcgta	Protospacer
  *******.********** ******.*   ***

13. spacer 1.4|1007855|37|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 9, identity: 0.757

cgcatgtcggcatcgccgagccggcggccttcgtgct	CRISPR spacer
tgtaggacggcatcgccgtgccggctgccttcgcgta	Protospacer
.*.* * *********** ****** *******.*.

14. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to AX955019 (Sequence 1 from Patent WO03093461) position: , mismatch: 9, identity: 0.743

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
acgcagtggtgggcctcgtcgacgatcagcaggtc	Protospacer
 .*.**.****************** ***  .**

15. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to NZ_CP051294 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence) position: , mismatch: 10, identity: 0.714

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
ccggtggcgtgcgcctcgtcgacgaacaggaaggc	Protospacer
..*  *  *** ****************** **

16. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to NZ_CP033363 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence) position: , mismatch: 10, identity: 0.714

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
ccggtggcgtgcgcctcgtcgacgaacaggaaggc	Protospacer
..*  *  *** ****************** **

17. spacer 2.16|1020111|35|NZ_CP033312|CRT matches to MG641885 (Salmonella phage PMBT28, complete genome) position: , mismatch: 10, identity: 0.714

ttgtagcggtgggcctcgtcgacgaacaggcagta	CRISPR spacer
gagaggtcttgggcttcgtcgacgaacagccagtc	Protospacer
  * .*.  *****.************** ****

18. spacer 2.10|1019711|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

acgctccaggccggggacagcctgggcaccggac	CRISPR spacer
ttcgtgaaggccggggaaagcctgggcatcgcgg	Protospacer
 .  *  ********** **********.** .

19. spacer 2.10|1019711|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

acgctccaggccggggacagcctgggcaccggac	CRISPR spacer
ttcgtgaaggccggggagagcctgggcatcgcgg	Protospacer
 .  *  ********** **********.** .

20. spacer 2.10|1019711|34|NZ_CP033312|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 11, identity: 0.676

acgctccaggccggggacagcctgggcaccggac	CRISPR spacer
ttcgtgaaggccggggaaagcctgggcatcgcgg	Protospacer
 .  *  ********** **********.** .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP033313

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1293911 : 1302682

Emiliania_huxleyi_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079285417.1\|1293911_1296407_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	7.2e-05	36.2
WP_035678614.1\|1296411_1296837_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_035678616.1\|1296928_1298014_-	site-specific DNA-methyltransferase	A0A1W6JJW1	Lactococcus_phage	1.5e-31	34.6
WP_035678617.1\|1298104_1298779_-	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	1.1e-19	35.6
WP_079285416.1\|1298775_1299564_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_059399308.1\|1299721_1300219_+	YchJ family protein	G9E3U3	Emiliania_huxleyi_virus	5.4e-05	62.2
WP_059399307.1\|1300463_1301042_+	cold shock domain-containing protein	A0A1W6JNX5	Morganella_phage	7.7e-11	49.2
WP_035678629.1\|1301233_1302682_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	5.2e-24	26.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP033317

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

130057 : 137712

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051141003.1\|130057_131050_+	AAA family ATPase	E9LUK9	Lactobacillus_phage	3.0e-15	31.2
WP_051141002.1\|131039_131909_+	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	2.8e-09	33.3
WP_035683236.1\|132061_133465_-	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	2.8e-51	32.2
WP_035683234.1\|133497_134823_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.3e-82	41.0
WP_035683232.1\|135090_135387_-	hypothetical protein	NA	NA	NA	NA
WP_035683231.1\|135472_136720_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	A0A2D2W2B8	Stenotrophomonas_phage	1.7e-15	28.7
WP_035683243.1\|136719_137712_-	UDP-N-acetylglucosamine 4,6-dehydratase (inverting)	A0A2P1ELS8	Moumouvirus	8.7e-39	33.8

DBSCAN-SWA_2

147223 : 193885

Azospirillum_phage(98.46%)

integrase,head,terminase,protease,capsid,portal

attL 138624:138641|attR 195311:195328

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
138624:138641	attL	NA	NA	NA	NA
WP_015989352.1\|147223_151612_-	hypothetical protein	B0VK47	Azospirillum_phage	0.0e+00	100.0
WP_015989351.1\|151739_152195_+	hypothetical protein	B0VK46	Azospirillum_phage	3.7e-77	100.0
WP_015989350.1\|152256_152685_-	hypothetical protein	B0VK45	Azospirillum_phage	6.1e-74	100.0
WP_137165271.1\|152691_153114_-	hypothetical protein	B0VK44	Azospirillum_phage	2.8e-79	100.0
WP_015989348.1\|153118_154096_-	ORF6N domain-containing protein	B0VK43	Azospirillum_phage	6.5e-188	100.0
WP_035681349.1\|154082_154262_-	hypothetical protein	NA	NA	NA	NA
WP_035681347.1\|154377_154791_+	hypothetical protein	NA	NA	NA	NA
WP_015989347.1\|154813_155497_-	hypothetical protein	B0VK42	Azospirillum_phage	1.2e-124	100.0
WP_035681345.1\|155501_155831_-	hypothetical protein	NA	NA	NA	NA
WP_105217759.1\|155872_156277_-	hypothetical protein	B0VK41	Azospirillum_phage	3.0e-70	100.0
WP_015989345.1\|156411_157884_-	hypothetical protein	B0VK40	Azospirillum_phage	6.6e-277	100.0
WP_035681343.1\|157956_158139_-	hypothetical protein	NA	NA	NA	NA
WP_035681341.1\|158141_158543_-	hypothetical protein	NA	NA	NA	NA
WP_015989343.1\|158545_158869_-	hypothetical protein	B0VK38	Azospirillum_phage	1.5e-53	100.0
WP_015989342.1\|158865_159531_-	hypothetical protein	B0VK37	Azospirillum_phage	2.7e-121	100.0
WP_015989341.1\|159533_159839_-	hypothetical protein	B0VK36	Azospirillum_phage	2.2e-49	100.0
WP_105217760.1\|159838_160078_-	hypothetical protein	B0VK35	Azospirillum_phage	1.0e-30	100.0
WP_015989339.1\|160134_160560_-	hypothetical protein	B0VK34	Azospirillum_phage	6.1e-74	100.0
WP_015989338.1\|160629_162006_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	1.2e-259	100.0
WP_015989337.1\|162018_162708_-\|head,protease	HK97 family phage prohead protease	B0VK32	Azospirillum_phage	2.7e-127	100.0
WP_015989336.1\|162704_164060_-\|portal	phage portal protein	B0VK31	Azospirillum_phage	2.2e-258	100.0
WP_015989335.1\|164059_164239_-	hypothetical protein	B0VK30	Azospirillum_phage	1.6e-23	100.0
WP_105217761.1\|164253_166068_-\|terminase	terminase	B0VK29	Azospirillum_phage	0.0e+00	99.8
WP_105217782.1\|166042_166492_-\|terminase	terminase	B0VK28	Azospirillum_phage	2.5e-78	100.0
WP_079285178.1\|166634_166886_-	hypothetical protein	W6E8K1	Rhizobium_phage	4.2e-14	55.1
WP_015989332.1\|166889_167228_-	HNH endonuclease	B0VK27	Azospirillum_phage	5.0e-63	100.0
WP_015989331.1\|167261_167933_-	hypothetical protein	B0VK26	Azospirillum_phage	3.3e-98	100.0
WP_015989330.1\|168129_168393_-	hypothetical protein	B0VK25	Azospirillum_phage	1.1e-44	100.0
WP_015989329.1\|168389_168680_-	hypothetical protein	B0VK24	Azospirillum_phage	4.2e-50	100.0
WP_015989327.1\|169008_169554_-	hypothetical protein	B0VK22	Azospirillum_phage	3.1e-94	100.0
WP_015989326.1\|169793_170594_-	hypothetical protein	B0VK21	Azospirillum_phage	1.4e-148	100.0
WP_035681339.1\|170590_170818_-	response regulator transcription factor	NA	NA	NA	NA
WP_015989325.1\|171105_171495_-	DUF2493 domain-containing protein	B0VK20	Azospirillum_phage	2.3e-72	100.0
WP_105217764.1\|171491_171953_-	hypothetical protein	B0VK19	Azospirillum_phage	6.0e-83	100.0
WP_105217765.1\|171949_172171_-	response regulator transcription factor	B0VK18	Azospirillum_phage	3.9e-32	100.0
WP_105217766.1\|172167_172458_-	hypothetical protein	NA	NA	NA	NA
WP_105217767.1\|172462_172849_-	hypothetical protein	B0VK17	Azospirillum_phage	4.1e-69	99.2
WP_144026799.1\|172845_173415_-	hypothetical protein	B0VK16	Azospirillum_phage	1.1e-99	99.5
WP_015989320.1\|173404_174280_-	YdaU family protein	B0VK15	Azospirillum_phage	7.2e-154	100.0
WP_149150395.1\|174529_174715_+	XRE family transcriptional regulator	B0VK14	Azospirillum_phage	1.6e-26	98.4
WP_105217768.1\|174919_175519_-	hypothetical protein	B0VK13	Azospirillum_phage	4.8e-117	100.0
WP_015989317.1\|175557_176118_-	hypothetical protein	B0VK12	Azospirillum_phage	4.2e-99	100.0
WP_015989316.1\|176224_176581_-	helix-turn-helix transcriptional regulator	B0VK11	Azospirillum_phage	4.6e-59	100.0
WP_015989315.1\|176590_176839_-	DUF2312 domain-containing protein	B0VK10	Azospirillum_phage	2.9e-36	100.0
WP_035681382.1\|176835_177159_-	DUF1064 domain-containing protein	B0VK09	Azospirillum_phage	4.5e-53	100.0
WP_015989313.1\|177254_177476_-	hypothetical protein	B0VK08	Azospirillum_phage	1.3e-35	100.0
WP_015989312.1\|177472_177913_-	hypothetical protein	B0VK07	Azospirillum_phage	5.9e-72	100.0
WP_105217769.1\|177912_178845_-	hypothetical protein	B0VK06	Azospirillum_phage	3.3e-173	100.0
WP_109111654.1\|179499_180150_+	helix-turn-helix transcriptional regulator	B0VK04	Azospirillum_phage	1.4e-98	100.0
WP_105217771.1\|180576_180990_-	hypothetical protein	B0VK03	Azospirillum_phage	1.0e-73	100.0
WP_105217772.1\|181006_181984_-	helix-turn-helix domain-containing protein	B0VK02	Azospirillum_phage	2.3e-177	100.0
WP_015989306.1\|182335_183223_-	EamA family transporter	B0VK01	Azospirillum_phage	4.3e-122	100.0
WP_137165276.1\|183564_183801_+	hypothetical protein	B0VK95	Azospirillum_phage	9.6e-37	100.0
WP_015989399.1\|183883_184261_+	hypothetical protein	B0VK94	Azospirillum_phage	6.6e-64	100.0
WP_015989398.1\|184262_184499_+	hypothetical protein	B0VK93	Azospirillum_phage	4.5e-42	100.0
WP_105217774.1\|184498_184759_+	hypothetical protein	B0VK92	Azospirillum_phage	3.9e-47	100.0
WP_015989395.1\|185231_185615_+	hypothetical protein	B0VK90	Azospirillum_phage	3.6e-73	100.0
WP_015989393.1\|185869_186106_+	hypothetical protein	B0VK88	Azospirillum_phage	3.5e-39	100.0
WP_015989392.1\|186111_186315_+	hypothetical protein	B0VK87	Azospirillum_phage	3.0e-31	100.0
WP_015989391.1\|186311_187112_+	hypothetical protein	B0VK86	Azospirillum_phage	1.2e-126	100.0
WP_105217775.1\|187114_187318_+	hypothetical protein	NA	NA	NA	NA
WP_105217776.1\|187314_188136_+	hypothetical protein	B0VK85	Azospirillum_phage	1.1e-156	100.0
WP_105217777.1\|188141_188555_+	hypothetical protein	B0VK84	Azospirillum_phage	5.9e-82	100.0
WP_035681329.1\|188551_189064_+	hypothetical protein	B0VK83	Azospirillum_phage	9.9e-95	100.0
WP_105217778.1\|189060_189303_-	transcriptional regulator	B0VK82	Azospirillum_phage	3.3e-40	100.0
WP_105217779.1\|189460_189739_+	hypothetical protein	B0VK81	Azospirillum_phage	1.7e-48	100.0
WP_105217780.1\|189789_190347_+	hypothetical protein	B0VK80	Azospirillum_phage	3.8e-108	100.0
WP_015989384.1\|190370_190802_+	hypothetical protein	B0VK79	Azospirillum_phage	1.4e-73	100.0
WP_015989383.1\|190808_191126_+	hypothetical protein	B0VK78	Azospirillum_phage	1.5e-56	100.0
WP_015989382.1\|191241_191424_+	hypothetical protein	B0VK77	Azospirillum_phage	4.3e-29	100.0
WP_015989381.1\|191420_191864_+	hypothetical protein	B0VK76	Azospirillum_phage	2.3e-71	100.0
WP_015989380.1\|191856_192093_+	hypothetical protein	B0VK75	Azospirillum_phage	1.6e-36	100.0
WP_137165277.1\|192362_192719_+	hypothetical protein	NA	NA	NA	NA
WP_105217781.1\|192880_193885_+\|integrase	tyrosine-type recombinase/integrase	B0VK72	Azospirillum_phage	1.8e-172	100.0
195311:195328	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP033315

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

183309 : 197117

Azospirillum_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_105217758.1\|183309_186039_+	hypothetical protein	B0VK49	Azospirillum_phage	0.0e+00	100.0
WP_015989355.1\|186048_186630_+	hypothetical protein	B0VK50	Azospirillum_phage	5.0e-103	100.0
WP_015989356.1\|186639_187326_+	DUF4376 domain-containing protein	B0VK51	Azospirillum_phage	4.0e-123	100.0
WP_015989357.1\|187329_187614_+	hypothetical protein	B0VK52	Azospirillum_phage	9.8e-44	100.0
WP_015989358.1\|187687_188134_+	lysozyme	B0VK53	Azospirillum_phage	3.6e-77	100.0
WP_035681352.1\|188213_188672_+	hypothetical protein	NA	NA	NA	NA
WP_105217757.1\|188675_189128_+	hypothetical protein	B0VK54	Azospirillum_phage	3.6e-72	100.0
WP_015989362.1\|190568_190892_-	HigA family addiction module antidote protein	B0VK57	Azospirillum_phage	9.1e-54	100.0
WP_035681354.1\|190888_191194_-	hypothetical protein	NA	NA	NA	NA
WP_051140843.1\|191186_191591_-	hypothetical protein	NA	NA	NA	NA
WP_051140844.1\|191583_191835_-	hypothetical protein	NA	NA	NA	NA
WP_051140845.1\|191827_192064_-	hypothetical protein	NA	NA	NA	NA
WP_015989364.1\|192245_192905_-	hypothetical protein	B0VK59	Azospirillum_phage	1.4e-120	100.0
WP_015989365.1\|192901_193162_-	hypothetical protein	B0VK60	Azospirillum_phage	4.0e-44	100.0
WP_015989366.1\|193158_193497_-	hypothetical protein	B0VK61	Azospirillum_phage	1.2e-61	100.0
WP_015989367.1\|193493_193793_-	hypothetical protein	B0VK62	Azospirillum_phage	3.0e-51	100.0
WP_105217755.1\|193785_194208_-	hypothetical protein	B0VK63	Azospirillum_phage	8.8e-73	100.0
WP_105217754.1\|194207_194414_-	hypothetical protein	NA	NA	NA	NA
WP_035681357.1\|194413_194683_-	helix-turn-helix domain-containing protein	B0VK64	Azospirillum_phage	7.1e-44	100.0
WP_015989370.1\|194805_195243_+	hypothetical protein	B0VK65	Azospirillum_phage	4.1e-73	100.0
WP_015989371.1\|195265_195685_+	hypothetical protein	B0VK66	Azospirillum_phage	1.8e-73	100.0
WP_015989372.1\|195712_195946_+	hypothetical protein	B0VK67	Azospirillum_phage	4.9e-33	100.0
WP_015989373.1\|195975_196182_+	hypothetical protein	B0VK68	Azospirillum_phage	2.3e-34	100.0
WP_105217753.1\|196213_196615_+	hypothetical protein	B0VK69	Azospirillum_phage	1.6e-68	100.0
WP_015989375.1\|196644_196896_-	hypothetical protein	B0VK70	Azospirillum_phage	3.8e-39	100.0
WP_105217740.1\|196892_197117_-	hypothetical protein	B0VK71	Azospirillum_phage	7.5e-39	100.0

DBSCAN-SWA_2

497804 : 508974

Azospirillum_phage(95.24%)

integrase

attL 502123:502139|attR 513048:513064

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149150374.1\|497804_498473_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.6e-15	34.5
WP_137165276.1\|498653_498890_+	hypothetical protein	B0VK95	Azospirillum_phage	9.6e-37	100.0
WP_015989399.1\|498972_499350_+	hypothetical protein	B0VK94	Azospirillum_phage	6.6e-64	100.0
WP_015989398.1\|499351_499588_+	hypothetical protein	B0VK93	Azospirillum_phage	4.5e-42	100.0
WP_105217774.1\|499587_499848_+	hypothetical protein	B0VK92	Azospirillum_phage	3.9e-47	100.0
WP_015989395.1\|500320_500704_+	hypothetical protein	B0VK90	Azospirillum_phage	3.6e-73	100.0
WP_015989393.1\|500958_501195_+	hypothetical protein	B0VK88	Azospirillum_phage	3.5e-39	100.0
WP_015989392.1\|501200_501404_+	hypothetical protein	B0VK87	Azospirillum_phage	3.0e-31	100.0
WP_015989391.1\|501400_502201_+	hypothetical protein	B0VK86	Azospirillum_phage	1.2e-126	100.0
502123:502139	attL	NA	NA	NA	NA
WP_105217775.1\|502203_502407_+	hypothetical protein	NA	NA	NA	NA
WP_105217776.1\|502403_503225_+	hypothetical protein	B0VK85	Azospirillum_phage	1.1e-156	100.0
WP_105217777.1\|503230_503644_+	hypothetical protein	B0VK84	Azospirillum_phage	5.9e-82	100.0
WP_035681329.1\|503640_504153_+	hypothetical protein	B0VK83	Azospirillum_phage	9.9e-95	100.0
WP_105217778.1\|504149_504392_-	transcriptional regulator	B0VK82	Azospirillum_phage	3.3e-40	100.0
WP_105217779.1\|504549_504828_+	hypothetical protein	B0VK81	Azospirillum_phage	1.7e-48	100.0
WP_105217780.1\|504878_505436_+	hypothetical protein	B0VK80	Azospirillum_phage	3.8e-108	100.0
WP_015989384.1\|505459_505891_+	hypothetical protein	B0VK79	Azospirillum_phage	1.4e-73	100.0
WP_015989383.1\|505897_506215_+	hypothetical protein	B0VK78	Azospirillum_phage	1.5e-56	100.0
WP_015989382.1\|506330_506513_+	hypothetical protein	B0VK77	Azospirillum_phage	4.3e-29	100.0
WP_015989381.1\|506509_506953_+	hypothetical protein	B0VK76	Azospirillum_phage	2.3e-71	100.0
WP_015989380.1\|506945_507182_+	hypothetical protein	B0VK75	Azospirillum_phage	1.6e-36	100.0
WP_137165277.1\|507451_507808_+	hypothetical protein	NA	NA	NA	NA
WP_105217781.1\|507969_508974_+\|integrase	tyrosine-type recombinase/integrase	B0VK72	Azospirillum_phage	1.8e-172	100.0
513048:513064	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP033314

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP033314_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033314_1

276756-277097

Orphan

Consensus_repeat	Method
ATGGAGCNNNAGCCCGCGC	CRT

5 spacers

The CRISPR arrays of NZ_CP033314_1

>merge|NZ_CP033314|1|276756-277097|CRT
ATGGAGCGGTAACCCGCGCCGTTGAAGCCCTGGCCCGCGCTCCTGGAGCCTTTGCCCGCCGCTATGGAGCGACAGCCCGCGCTTCATCGCCGAATCGGAATCCTGGAGTGGAAACCCGCGCCCCTGGAGCGATAGCCCGCGCCTCCGGATTCGCGGTCGTTGGAGCCATAGGCTGCGGCCGGTGCGCGGGACTATGGAGCAACAGCCCGCGTTTCGGCGGAGGTTCACCCGCCCACCATGGAGCGATAGCCCGCGGGTATGGAGCGACAGCCCGCGCCCTGCCGTCCGCACCGCCCGGGGGGCGATCCGGCGGCGAGCAGAGGATGGAGTTTCTGCTCGCGC

>NZ_CP033314|1|1|276756-277097|CRT
ATGGAGCGGTAACCCGCGC	CGTTGAAGCCCTGGCCCGCGCTCCTGGAGCCTTTGCCCGCCGCT
ATGGAGCGACAGCCCGCGC	TTCATCGCCGAATCGGAATCCTGGAGTGGAAACCCGCGCCC
CTGGAGCGATAGCCCGCGC	CTCCGGATTCGCGGTCGTTGGAGCCATAGGCTGCGGCCGGTGCGCGGGACT
ATGGAGCAACAGCCCGCGT	TTCGGCGGAGGTTCACCCGCCCACCATGGAGCGATAGCCCGCGGGT
ATGGAGCGACAGCCCGCGC	CCTGCCGTCCGCACCGCCCGGGGGGCGATCCGGCGGCGAGCAGAGG
ATGGAGTTTCTGCTCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033314.1\|WP_059399565.1\|282373_285694_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_CP033314.1\|WP_059399568.1\|271273_271801_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|273701
NZ_CP033314.1\|WP_079292173.1\|264516_265263_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP033314.1\|WP_079285571.1\|271845_273987_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP033314.1\|WP_059399570.1\|267591_268773_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380548
NZ_CP033314.1\|WP_035679421.1\|289440_291480_+\|M3-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341051
NZ_CP033314.1\|WP_035679879.1\|266413_267595_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
NZ_CP033314.1\|WP_035679951.1\|278642_279098_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP033314.1\|WP_035679996.1\|281292_282360_+\|response-regulator	unknown	unknown	gnl\|CDD\|225971
NZ_CP033314.1\|WP_059399564.1\|286671_287610_-\|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226644
NZ_CP033314.1\|WP_035679874.1\|262865_263624_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270259
NZ_CP033314.1\|WP_035679943.1\|274002_275043_+\|DctP-family-TRAP-transporter-solute-binding-subunit	unknown	unknown	gnl\|CDD\|270395
NZ_CP033314.1\|WP_059399563.1\|287612_288809_-\|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein-ProV	unknown	unknown	gnl\|CDD\|226643
NZ_CP033314.1\|WP_035679953.1\|279226_279646_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP033314.1\|WP_059399567.1\|275065_275752_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033314.1\|WP_035680004.1\|285718_286609_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270357
NZ_CP033314.1\|WP_059399569.1\|268775_271277_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP033314.1\|WP_059399566.1\|279828_280509_-\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|226868
NZ_CP033314.1\|WP_035679948.1\|277405_278623_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033314.1\|WP_051140718.1\|265352_266417_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|224666

Protein	Function_ID	Function_description	E-value
NZ_CP033314.1\|WP_059399565.1\|282373_285694_+\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	2.92472e-118
NZ_CP033314.1\|WP_059399568.1\|271273_271801_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|273701	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR\|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database. [Protein synthesis, Ribosomal proteins: synthesis and modification].	1.26898e-05
NZ_CP033314.1\|WP_079292173.1\|264516_265263_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	9.86335e-19
NZ_CP033314.1\|WP_079285571.1\|271845_273987_+\|HAMP-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.21501e-53
NZ_CP033314.1\|WP_059399570.1\|267591_268773_+\|hypothetical-protein	gnl\|CDD\|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	1.32493e-21
NZ_CP033314.1\|WP_035679421.1\|289440_291480_+\|M3-family-metallopeptidase	gnl\|CDD\|341051	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP). Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). This metal-binding M3A family also includes oligopeptidase A (OpdA; EC 3.4.24.70). DCP cleaves dipeptides off the C-termini of various peptides and proteins, the smallest substrate being N-blocked tripeptides and unblocked tetrapeptides. DCP from Escherichia coli is inhibited by the anti-hypertensive drug captopril, an inhibitor of the mammalian angiotensin converting enzyme (ACE, also called peptidyl dipeptidase A). OpdA may play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. It can also cleave N-acetyl-L-Ala. This family also includes Arabidopsis thaliana organellar oligopeptidase OOP (At5g65620), which plays a role in targeting peptide degradation in mitochondria and chloroplasts; it degrades peptide substrates that are between 8 to 23 amino acid residues, and shows a weak preference for hydrophobic residues (F/L) at the P1 position.	0
NZ_CP033314.1\|WP_035679879.1\|266413_267595_+\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	2.54099e-101
NZ_CP033314.1\|WP_035680004.1\|285718_286609_-\|glycine-betaine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.65481e-121
NZ_CP033314.1\|WP_035679996.1\|281292_282360_+\|response-regulator	gnl\|CDD\|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	8.46805e-104
NZ_CP033314.1\|WP_059399564.1\|286671_287610_-\|proline/glycine-betaine-ABC-transporter-permease	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	4.39239e-134
NZ_CP033314.1\|WP_035679874.1\|262865_263624_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270259	cd13541, PBP2_ModA_like_2, Substrate binding domain of molybdate-binding proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.16469e-96
NZ_CP033314.1\|WP_035679943.1\|274002_275043_+\|DctP-family-TRAP-transporter-solute-binding-subunit	gnl\|CDD\|270395	cd13677, PBP2_TRAP_SBP_like_6, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	6.62763e-152
NZ_CP033314.1\|WP_035679953.1\|279226_279646_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	7.09174e-75
NZ_CP033314.1\|WP_059399563.1\|287612_288809_-\|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein-ProV	gnl\|CDD\|226643	COG4175, ProV, ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism].	0
NZ_CP033314.1\|WP_059399569.1\|268775_271277_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.14224e-21
NZ_CP033314.1\|WP_059399566.1\|279828_280509_-\|DUF1311-domain-containing-protein	gnl\|CDD\|226868	COG4461, LprI, Uncharacterized protein conserved in bacteria, putative lipoprotein [Function unknown].	1.53641e-22
NZ_CP033314.1\|WP_035679951.1\|278642_279098_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.88998e-22
NZ_CP033314.1\|WP_051140718.1\|265352_266417_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|224666	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	6.65077e-42

>NZ_CP033314.1|WP_059399567.1|275065_275752_-|hypothetical-protein
MTAQPRSAPPGGASPSVVTHLPSRPPLPFDPAAPAHERGLALAAALPVPLRTVLASGRVERRPRFGDRGFDGVTEEWTPPDGVSGQHALMARRALDELTGSILAPASPDHLLARVLALLSHYPAKGTAPEVEHLVALDWAEDLGEFPAWAVDAAARTWRRTQKWRPSIAEMRALCEEACAPEWALARRLSSIAVAGSASGGDGAGEGTGHGRAGRLRALAGGAVRRMG
>NZ_CP033314.1|WP_035679943.1|274002_275043_+|DctP-family-TRAP-transporter-solute-binding-subunit
MKSRWTARLLAACTVLALALAAAGVSAETVIKLAHPNRNDAFDNTAGAMAIVFKNHVEVATERRVRVEIFPEGQMGRDGDAVKLVRQGTIQSAISSVGGVAPLYPMLAVIDLPFAYSSVANAYDVFDGPFGHRLAEEIRRKAGLAVLGFGDPGGLFTITNSKRPIRQPEDMKGLKIRTMDLETHRTMIGSLGGTPVNVAWSDLYNALGTGAVDGQMNPVPIVRFARFDEVQRHLTLSNHLFLPYVWVMNAKFLDDLAPSDRAAVMNAARLGVVASRGLSRLIESSDRGLPPLAQRMEVHTLTPREAEAFRKVTQPAVRQAIERRFGAEGVEMLAAFERAIREERTP
>NZ_CP033314.1|WP_079285571.1|271845_273987_+|HAMP-domain-containing-protein
MSQTPYRIRLRVGIALAFLLTTVPLIAVMLSYLFHENSRSALEVASQSIARTTQTVTNDLNGLVSPVARVAEAMAGFGRIDRNGLRRIESLRYFSDALATLPQLASLYVGFAGDGAFFQMARLAPDGGRFGPAIPPPGSALALRMQDSSSGSFADSYFYLRSWGQVTGVERTEATEDPRTAPWYVAAQTVGTAVMSDAFVLPATRRPVVTVSYRMATDDGVPIGTIGADVSLDRLAARLDALRIGPSGAVFVIDGNGRVICHNRADLLVGGDGTTAALHTTATFPDPVLAEAVERRNGGAGDRFIAPLGPMGHDYIVEFATLADGIGGGWTVGVAVEVDEFVGSLRRATYRIVVIGAGLLAVSILLLLWLSHRLTRPMQDIVSETKRIRHFDLTGRFAVRTRVQEVAELAGAVEAMKGGLRRFGAYVPKALVRDIIVTGDGGELGGETRPLSILFSDIAGFTATSEAMPPQQVLDRLTTYFERMTACIHGHGGTVDKFIGDAIMAFWNAPRPDPDHAEHACLAALGCLSVNRAINDACLAAGMPPMPTRFGLHLGEVVVGNVGSSDRMQYTALGSHVNLASRIEGLNKVYGTSILVTGAVEQAVRGRFLFRPVDLAVPSGLSAPIELFELVGALDPHSAFARPPETHDLCRQWHVAVSLYRGRRWSAALELLQPLAGEPEVAALARLYIARCERLIADPPGDGWDPAEHFKSK
>NZ_CP033314.1|WP_059399568.1|271273_271801_+|GNAT-family-N-acetyltransferase
MSGLRFAPLTSDALGAVLELQRESCGPLMHPLGEAELSDMLAGPAAGHGVVLGALTDRGLAAFLAVQFPGRAAHNLGRDYGLPEGDLDRALHFTGILVHPDRRGQGLHRRLIETAAQGVLPPDRHRYWFATVRPENTASVRGMLSVGMRVFARRPKHDGHDRLLFVRDLSAPAGG
>NZ_CP033314.1|WP_059399569.1|268775_271277_+|MFS-transporter
MASSGAPSGRSGLLRAFLVSVLLVGVTLAFSLSINLGSFRQNHAGTLMAAFAVVGGKTVENVQDALGYGKPLDDFYGLEAILDQLAANLPGARGIGVAVADGRVVAIARGRPVEPVTEATLRRARAELERRPHWFRHDAGNGTYALYLPIRTPGEAERAGRPVDAPAGFLIIQSDSARVDDRVEDFRDRTLPQLLWTGLGTVGFLGLTGLVMAFGLRRAPEGRRVRLERLRRLLALGAMLAAQTAAAAECYTLISTAHLEAAEQATQIVARMIRNDLESVVRRGLDYGSLAGVDGYFERIRASMPTLQSIELALPGTTPPSHDARHIVGGVPFLSDMPDVTLRWPLAQDRGGEARELVAVVDGDRVATQLTEFGLDMATILVTSLLFMFEMDRVLGGRTWMARRSGDGRAVAGGTGNVAGSIRFSAFLMYFGAFLPVSFVPLLMTSFGAEPFPFLSPSQIAAAPLTAEMLCGVAAALAAGRLTGRFGWRAVSLAGFAAAAAGMALAAVAVVAADPLLFVLARGLSGAGGMAGLIAANALIGRLRGVSDTSALQSGLFAGMYAGVNCGAVSGALLSTTYGPVTVFAGGAVIPVAGLLYTAFGVPRLPGAVPPDAHCAPVPSPCGGTVHPRRRRIKVPLFLALISLPTAVAAMFLPFYLPLFIADLGLSSATVGRAYLLHGLCVVLAGPLLTRMAARRLPVPGVTLLSAAMIAGALALFGLQASLWTAFATVFLIGLAESFGLSAQMRHAELLAAREARRRDSVLALHVNTRKLGQAAGPLLFGTLAAAVPLGAGPEGVGMIGGLLAGSLLLFALLTWRRTVPSRTRRSQTEGGR
>NZ_CP033314.1|WP_059399570.1|267591_268773_+|hypothetical-protein
MNPQSSSDASGAAAMTRRGWMAGAAAAGLGVLCPSATALAATRPLPSVRDVPRRWRIGYAESMPYGNYAATLAAILGELERMGWTGGLSGMPYRPGQTDTATLWSWLATHADSPVLDFVADAHATNLTSDGAAALVMRLQEPSDIDLMIVMGTVAGIALATDAHRVPVLAFSCTNPIAAGIVAAETDTGRDHVWAHLDPRRFQRQLSIFHKTFQFRRLGIAYDDSPTGRAIASLPDIEATAERIGFELVERHVRAPIDHLDQYRYEVDLTAAWEALSREADAVYITYGRWPLDRFSSLVRPFLKRRIPTFSQLGPEEVERGALMSIARADMAGIGHFGAATLARVMAGEPLRHLPQVYFDTPSIAWNAATAAAIGYRIPFPALLAADSLHGVL
>NZ_CP033314.1|WP_035679879.1|266413_267595_+|alanine-racemase
MTGTRTGRRGSTTAWADIDLHALGRNLERLRRGLPSGQAVFGVVKADAYGHGAGPVGRALQRFGVDGLVVADMGEGITLRRAGVTAPILVIDPPLQSQLRLPALHRLGATVTSAAEARALATAANRAGRTVDVHVRVNTGFAGFGAAHADLIDVLAAVSVAPALRLEGLYTHLSGVYGPYEDGGLVELERFGEAVDAARGAGLLPPLVHALSSPALDRPLLTNAAARIGCTAVRCGAALFGIRMVDGEGSASLAPVMSVKARVTRVTVLEPGDVADYATAGAAPRRTPVAVLPFGFSDGHHLHRLAGGVLLIRGCPAPILARPFMSSLLADLTDIPSVQPGDEAVLIGRQGDHRITVEDIAARSGLRPSAVPLLGPRVVRRYRTSATGEEPPE
>NZ_CP033314.1|WP_051140718.1|265352_266417_+|patatin-like-phospholipase-family-protein
MPEQILPAPAIQSTSRTSVKPINLALQGGGAHGSFTWGVIDRILEDGRLTIDGIVGTSAGAMNCAVTAYGLTIGGPEGARSKLREFWRRISDEAKKGPLQPTPLDKMFSKGNMDFSPLWQMFDALSRMMSPYELNPMNQNPLRDVLSDVVDFKRLRKAPACKTFIAATDVCAGRLKVFGPKDISVDAVLASACLPFLFQAVQVGNAFYWDGGYSGNPPLFPLIDQCDSRDILIVQINPVRVPVPPRTAREIMDRVNTLSFNSSMMRELRVVDFVSKLIDSGELSPEKHKKMHIHTVDAEEVVEKLGVTSKLNADWDFLTYMFETGRHKAEEFLDQHFDKIGRESSTDISAKFLA
>NZ_CP033314.1|WP_079292173.1|264516_265263_+|sigma-70-family-RNA-polymerase-sigma-factor
MAGSPRLHSHTGENLHELDDSGLLERIATRDQTAFWVFWCRHYTDLFWTYHRLCKGNRQEIHDCLSGLCINLSEALPLYARSIIKTRTWLRRTAINHFIDRHRAHQRHPVLVGSLVEIASIADGTSGRDAMDPERTNADRALLAKVLESLDGIRDERMRQAARMRFIEEQPYADIAAELSISEELARKWIQQIRSYLRSAVPDHRDLLAKPPPDTPQSRRATKHGVLTRTRPPKPPSTPPSKTMKPAL
>NZ_CP033314.1|WP_035679874.1|262865_263624_+|molybdate-ABC-transporter-substrate-binding-protein
MDKTEERPGDAVNLFAAGSLKAVLGELGAMFEAREGIPVTAVFAPSGLLKDRLLWSGEGGLFASANMAHPHALADAGRATAVRPFASNQLCVIAQPEMDVTADTLLDRLLDPTTRLGTSTPQADPAGDYAWDVFRKAEALRPGSFAALDAKALRLTGGPDSESPPEGRNPYGWLMERRKADLFLTYRTNARLAALEIPGLTIIDLPAAIAVGADYGLTVLDGANRPCVEAFADCILSPLGQAVLRRHGFAAP
>NZ_CP033314.1|WP_035679948.1|277405_278623_+|hypothetical-protein
MSKIATPGALQLVLFELEDRSQSHLIALYDLAPRYVFASRDGGRSAETAPAKGNFVASIKREFTYHGSTFHLTIQPARLTRMVNRDDGAAQADGQTEIEYEVFPAEREQVVEHVVRRLAMDRSRLSLGGENRDKVQMRFTLYEIQRELKAVGHTLSIRDIRESLTILARSRIIIGKPAEGVKKGRGANLLESTAFPVLAIRSRPDLIGDEGGDEETHLQFNPLVSSAIRNLEFKPVSYQWLMRLKSPVSRWLYNRLSAEYDYSGAETPGDLGARAMTLSADEIIKNSGMNVWSRRRDTLRAVTSAVDALVEEGILTSAEKLYDKVGARIEGITYVMLPSAKFLAQVRKAQAVESANVAAMRAITGDDRRPTDFVPVTPAATVETRARRAKRLTEEPPRLPMAEAG
>NZ_CP033314.1|WP_035679951.1|278642_279098_-|MarR-family-transcriptional-regulator
MSTENDNPLLLANQACFALYSANLAMTRVYRPLLEALELTYPQYLAMLLLWEQDGQTMKALGERLLLDSGTLTPLLKRLEGQGLVTRGRDPADERLVRIHLTPQGTALRERATGLPERIAAAANCPLPDLAGLRDALLSLRDSLNAAADRD
>NZ_CP033314.1|WP_035679953.1|279226_279646_-|organic-hydroperoxide-resistance-protein
MKILYTTKATATGGRDGKAETDDGLLSVALAAPKELGGKGGATNPEQLFAAGYSACFLGAMKFVGNRDKITVPADVTVTAQVGIGPRDDGEGFGIAVDLTVSLPGLDKAAAEDLVARAHKVCPYSHATKGNIAVNTAIA
>NZ_CP033314.1|WP_059399566.1|279828_280509_-|DUF1311-domain-containing-protein
MLRPALLALGLLALPTAAAAAGFPCSKAATPTEKAICADPALSALDGRLATTYRAALERLSGASPEEGAAGAAVKADQRAWLRERDSCGADAACLRRAYDGRTAILSFRTDPATPPSPIGRYVGRFDHEGFIGIAAIALRNGTVAVSVSGAEPSAGRWVCDFSGIGRLDDKGRLTVGTPDAEGGGLILVAEEGGGVVIPDLEPNRAASGYWCGHNGSFIWTYRRAS
>NZ_CP033314.1|WP_035679996.1|281292_282360_+|response-regulator
MQVVIVDDDPSTLFITSAVIRRIDDAEPIGMGNPLEALDWLAVNTPDLILIDHVMPDLDGMDVLERIRAQRHLADVPVVMITADTSVKLRVAALESGCTDFLTKPIIVPELLARAQNLLRLRLGQRMMRDQAAVLRSRVEEATAQLRQQAQELVARLARAAEYRDPETGLHIERMASYSRVIAESLGMDPDDCARLAEAAPMHDIGKIGIPDAILLKPGRLTDSEMQVMREHPAIGHAVLQGSGHPLISKAAEIALGHHEKYDGTGYPKGLRGEEIPLACRIVAIADVFDALTTARPYKRPWPLDIAKAYIVERSGSHFDPVCVNAFLRVWTTVLAIHDAHPDPDFTGTDGAAFR
>NZ_CP033314.1|WP_059399565.1|282373_285694_+|PAS-domain-S-box-protein
MPDTPASLSLPEHGHRAYALRSRALVSGVWMATLLLTAAAWTAALYLTDRDQRDALQRAERDTGNLAHIIAEQTTRAIAGTDRILSFIGYDLYRLGSQSPLLRDVMRNATLDSDLLLQLAYADGKGDLIQTSVDNAPARVNLADREHFRVHKEGTVQGLFISRPVFGRASGKWSIQLSRKVTAPDGGFGGMIVASLDPFYFGRTFDNLDVGHDGIISIIGRDGILRARSVMDDRIIGLDLGMSPILREAQEKTQGFLRSVSPVDGGVRLTSFRSLPNYPLIVSAGFGEAEFMAETWARQRAYTVGAGLTTALLFVLAALVTWQSRAQERAHATLDEAARHLRASKTKLRDIAETASDWFWEMDADLCFAGVSGAYAGSIRDPELYRGRRCEDIAQREAGDGAHWEEHRRTLEDRQPFRDFEFAVRGPDGDTRIWSLSGKPVFDDLGAFVGYRGSGSDVTERRRAERSLTDSERRYRAMFAAVGQPIVVTDQNAVITGFNPAAESLFGFREVEMIGRNVSVLMPDGHAVNHDRLFQEYQSSGRGSPSGVVREVPVRRADGALVPTEIALSSWRAGGREHFIGVFHDLSKAKQIEADLRRARDSAEHANRMKSEFLATISHEIRTPMNGVLGTLTLLDDDGLKPEERRLAGVARRSAESLLRLLDDILDFSKLEAGRIAIEEETCAPADLVEAVMAVFQPSAADKGLTLSCRMLPTVPEAVVTDPARLRQILFNLVGNAVKFTGTGHVAVRAHRGADLPDGRFLLEFEVEDSGIGIAAESIPSLFDRFTQADNSITRRYGGTGLGLAICKELCGLLGGTISVSSAPGKGSLFQFSVACAPGDPATLRHAAEAPSAAPLPPLRILAVDDNAVNRDIVRGLLVRGGHSVVTAADGDEAVRTVERSEEPFDVVLMDVQMPGMDGLTATRLIRALPAPRNGVPVIALTAHASGSSLPECVAAGMNGFVPKPLRPAALDAAIRAVISSPASKPVADAVPETAPVAELLDREQVESVAEALGPESWCEAVRGFSRTAREQVTLISAALANGEEHRRAAHMLKGLSWNVGAKQLGDLALALEKAPPDEALALARSLEGVLKDSVEALSEPLSEPL
>NZ_CP033314.1|WP_035680004.1|285718_286609_-|glycine-betaine-ABC-transporter-substrate-binding-protein
MMALGVAAVIGSTALSSAGFAAANTAEGDKKPVRIGWTAWSDAEAVTKLAQRLIQERLDQPVELVLADIGLQYQGLAKGDLDFMMMSWLPTTHASYLDKVGKDIVPLGMLYTRARLGWAVPDYVPEDQVKTIADLAKPEIREKLKGKIQGIDPGSGLMQASEKALKDYSLDGYELVSASGAAMTAALGRAERREDWIAVTAWSPHWMFAKWKLRYLEDPKGSLGGLERVHVMARKDFYQEHPKVAEFLTRMYLPLEDLEKIMLEADDSSYDKAIDNYIANNKQRVDYWVTGEMPAS
>NZ_CP033314.1|WP_059399564.1|286671_287610_-|proline/glycine-betaine-ABC-transporter-permease
MDFKLPIGDWADAAVMFLLDHAQWLFDGIDLVVGAVADGVQSALTSLPGVALAAIVVLIGLWRNGWRFALFAAAALFVVAGLGMWHQTVDTLALVLTATAIALTIGVPLGIVAARNDRVETVVRPALDLMQTMPAFVYLIPAAMLFGLGRVPGIIATIIFAMPPVVRLTSLGIRQVPHELVEAGLAFGCTPRQLLFKVQMPTALPSIMAGINQTIMLSLSMVVIASMIGAGGVGNEVLRGIQRLDIGLGVEGGLAVVILAILLDRITQSFGTPDAGGRSPRSALRSLLTRRRADPPKDNAHLSPTHGVTEAG
>NZ_CP033314.1|WP_059399563.1|287612_288809_-|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein-ProV
MTAKIAVKGVTRIFGRHPRQALDLLKAGLSKEEIFKRTGQTVGVLDASFEVEAGEIFVIMGLSGSGKSTLVRMLNRLIDPTAGEIRIDGRDITKLSRAELTELRRRDLGMVFQSFALLPHLRVWENAAFGLEIAGESLKARRDKAQQALDAVGLGAYAESYPRELSGGMQQRVGLARALANEPSVLLMDEAFSALDPLIRTEMQDELLRLQAERQRTIVFISHDLDEAIRIGDRLAIMEGGQIIQVGRPDEILKQPANDYVRSFFRNIDVTKILTAGDIARRDQVTLIRHTGEGPRAAVRQLRERDREFGYVQDGRRRFHGVVSVETLVSAIERHNGSATLDEALLPGIEPLPVDLPMDEVLPRIASAPCPLPVVDGQGAYVGAISKTAYLETLGRTR
>NZ_CP033314.1|WP_035679421.1|289440_291480_+|M3-family-metallopeptidase
MSNPFFETWTTPFGLPPFDRIQAEHFPPAFDHGMAENIAEIAAITGNPDAPTFANTIEAMERSGRFLNRVGGVFWNLNSSNTTDALETIARDYAPKFAQHSMRIALDPALFARVADLYERRDTLGLAPDQLRLLERQHLGFVRSGALLPPDAKARMTAITERLATLHTLFGQNVLHDEKDWQLVLEESDLAGLPDFARNAAAQAAKERGQEGKYVITLARSSVEPFLTFSARRDLRQVAYEAWIRRGEHEGEHDNRPLIREIVALRTEQAKLMGYASYADFKLDDSMAKDTSAVERLLLQVWGPAKEKAAAERAELQDCARAEGMNEPIAPWDWRYYAEKVRQAKYDIDEAEVKPYFVLENMVRAAFDTAGRLFGLTFTERPDLPVYHPDVRVYEVTEKDGRHVGIFLHDNFARSSKRSGAWMSSYRDQETFDGAVSPIIVNNNNFSKGEPTLLSFDDAETLFHEFGHFLHGCLSNVRYPSQSGTSVRRDFVELPSQIYEHWLAVPETLSTYARHHQTGEPIPQDLLRRLLAARNFNQGFGTVEYTAAALLDLEFHTRSDAADTDVAAFERSVLDKIGMPAEIAVRHRPTHFQHLFAGSGYAAGYYAYLWAEVLDADGFEAFLETGNPFDPDLAAKLKTIYSSGDTRDPMELYTAFRGREPRIEALLKHRGLTQSLGDA

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Crispr_ID: NZ_CP033314_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033314_2

509744-509932

Orphan

Consensus_repeat	Method
GTGACGCTGGGCAGCGCCGGCAACACGCTGCTG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP033314_2

>merge|NZ_CP033314|2|509744-509932|PILER-CR
GTGACGCTGGGCAGCGCTGGCGTCACGCTGCTGGTGGACGGTGTCGAGACGGTGACCGGCGGACTCGGCACCGACATGGTGGAACTGGGCAGCGCCGGCAACACGCTGCTGTTGGGTGGTATCGAAACGCTGGCCGGCGGCATCGGCACCGACGTGGTGACGCTGGGCGGCGGCGGCAACACGTTGCTG

>NZ_CP033314|2|1|509744-509932|PILER-CR
GTGACGCTGGGCAGCGCTGGCGTCACGCTGCTG	GTGGACGGTGTCGAGACGGTGACCGGCGGACTCGGCACCGACATGGTGGAA
CTGGGCAGCGCCGGCAACACGCTGCTGTTGGGT	GGTATCGAAACGCTGGCCGGCGGCATCGGCACCGACGTGGTGACG
CTGGGCGGCGGCGGCAACACGTTGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033314.1\|WP_035680334.1\|526338_527046_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240074
NZ_CP033314.1\|WP_014242220.1\|527051_527573_-\|formaldehyde-activating-enzyme	unknown	unknown	gnl\|CDD\|378034
NZ_CP033314.1\|WP_079285676.1\|525305_526304_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|224734
NZ_CP033314.1\|WP_051140751.1\|527640_528519_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376637
NZ_CP033314.1\|WP_035680320.1\|520680_521514_+\|riboflavin-biosynthesis-protein-RibD	unknown	unknown	gnl\|CDD\|224896
NZ_CP033314.1\|WP_035680267.1\|504083_504944_+\|isocitrate-lyase/PEP-mutase-family-protein	unknown	unknown	gnl\|CDD\|119340
NZ_CP033314.1\|WP_035680326.1\|522392_523223_-\|quinoprotein-dehydrogenase-associated-SoxYZ-like-carrier	unknown	unknown	gnl\|CDD\|275350
NZ_CP033314.1\|WP_035680251.1\|490847_493154_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP033314.1\|WP_079285186.1\|494931_495315_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033314.1\|WP_035680264.1\|502846_504052_+\|2-methylaconitate-cis-trans-isomerase-PrpF	unknown	unknown	gnl\|CDD\|131387
NZ_CP033314.1\|WP_079285675.1\|522029_522368_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033314.1\|WP_035680261.1\|500210_502847_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	unknown	unknown	gnl\|CDD\|131386
NZ_CP033314.1\|WP_035680260.1\|499019_500201_+\|2-methylcitrate-synthase	unknown	unknown	gnl\|CDD\|183463
NZ_CP033314.1\|WP_035680254.1\|493353_494787_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226322
NZ_CP033314.1\|WP_035680255.1\|495786_497703_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236378
NZ_CP033314.1\|WP_035680257.1\|497740_498832_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|236591
NZ_CP033314.1\|WP_035680329.1\|523227_524199_-\|quinoprotein-relay-system-zinc-metallohydrolase-2	unknown	unknown	gnl\|CDD\|275352
NZ_CP033314.1\|WP_035680301.1\|489820_490726_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176132
NZ_CP033314.1\|WP_079285668.1\|524204_525302_-\|S-layer-protein	unknown	unknown	gnl\|CDD\|163144
NZ_CP033314.1\|WP_014242213.1\|521658_521739_-\|pyrroloquinoline-quinone-precursor-peptide-PqqA	unknown	unknown	gnl\|CDD\|273976

Protein	Function_ID	Function_description	E-value
NZ_CP033314.1\|WP_014242220.1\|527051_527573_-\|formaldehyde-activating-enzyme	gnl\|CDD\|378034	pfam08714, Fae, Formaldehyde-activating enzyme (Fae). Formaldehyde-activating enzyme is an enzyme required for energy metabolism and formaldehyde detoxification. It catalyzes the condensation of formaldehyde and tetrahydromethanopterin to methylene tetrahydromethanopterin.	1.90078e-96
NZ_CP033314.1\|WP_079285676.1\|525305_526304_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|224734	COG1821, COG1821, Predicted ATP-utilizing enzyme (ATP-grasp superfamily) [General function prediction only].	1.76255e-32
NZ_CP033314.1\|WP_051140751.1\|527640_528519_-\|hypothetical-protein	gnl\|CDD\|376637	pfam01874, CitG, ATP:dephospho-CoA triphosphoribosyl transferase. The citG gene is found in a gene cluster with citrate lyase subunits. The function of the CitG protein was elucidated as ATP:dephospho-CoA triphosphoribosyl transferase.	1.51378e-67
NZ_CP033314.1\|WP_035680320.1\|520680_521514_+\|riboflavin-biosynthesis-protein-RibD	gnl\|CDD\|224896	COG1985, RibD, Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism].	8.27898e-18
NZ_CP033314.1\|WP_035680267.1\|504083_504944_+\|isocitrate-lyase/PEP-mutase-family-protein	gnl\|CDD\|119340	cd00377, ICL_PEPM, Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage. Known members are phosphoenolpyruvate mutase (PEPM), phosphonopyruvate hydrolase (PPH), carboxyPEP mutase (CPEP mutase), oxaloacetate hydrolase (OAH), isocitrate lyase (ICL), and 2-methylisocitrate lyase (MICL). Isocitrate lyase (ICL) catalyzes the conversion of isocitrate to succinate and glyoxylate, the first committed step in the glyoxylate pathway. This carbon-conserving pathway is present in most prokaryotes, lower eukaryotes and plants, but has not been observed in vertebrates. PEP mutase (PEPM) turns phosphoenolpyruvate (PEP) into phosphonopyruvate (P-pyr), an important intermediate in the formation of organophosphonates, which function as antibiotics or play a role in pathogenesis or signaling. P-pyr can be hydrolyzed by phosphonopyruvate hydrolase (PPH) to from pyruvate and phosphate. Oxaloacetate acetylhydrolase (OAH) catalyzes the hydrolytic cleavage of oxaloacetate to form acetate and oxalate, an important pathway to produce oxalate in filamentous fungi. 2-methylisocitrate lyase (MICL) cleaves 2-methylisocitrate to pyruvate and succinate, part of the methylcitrate cycle for the alpha-oxidation of propionate.	1.46713e-88
NZ_CP033314.1\|WP_035680326.1\|522392_523223_-\|quinoprotein-dehydrogenase-associated-SoxYZ-like-carrier	gnl\|CDD\|275350	TIGR04557, hypothetical_protein, quinoprotein dehydrogenase-associated SoxYZ-like carrier. Members of this family are fusion proteins, with the N-terminal region similar to the sulfur oxidation protein SoxY (TIGR04488) and the C-terminal region similar to sulfur oxidation protein SoxZ (TIGR04490). Members occur exclusively in species with PQQ-dependent enzymes that have a Cys-Cys motif (TIGR03075) for electron transfer to c550 family cytochrome. By homology to the sulfur moiety-binding subunit SoxY, we predict the conserved Cys in the Gly-Gly-Cys motif binds some unknown adduct.	1.42837e-90
NZ_CP033314.1\|WP_035680251.1\|490847_493154_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP033314.1\|WP_035680329.1\|523227_524199_-\|quinoprotein-relay-system-zinc-metallohydrolase-2	gnl\|CDD\|275352	TIGR04559, metallo-beta-lactamase_family_protein, quinoprotein relay system zinc metallohydrolase 2. By homology, members are Zn metallohydrolases in the same family as the SoxH protein associated with sulfate metabolism, Bacillus cereus beta-lactamase II (see PDB:1bc2), and, more distantly, hydroxyacylglutathione hydrolase (glyoxalase II). All members occur in genomes with both PQQ biosynthesis and a PQQ-dependent (quinoprotein) dehydrogenase that has a motif of two consecutive Cys residues (see TIGR03075). The Cys-Cys motif is associated with electron transfer by specialized cytochromes such as c551. All these genomes also include a fusion protein (TIGR04557) whose domains resemble SoxY and SoxZ from thiosulfate oxidation. A conserved Cys in this fusion protein aligns to the Cys residue in SoxY that carries sulfur cycle intermediates. In many genomes, the genes for PQQ biosynthesis enzymes, PQQ-dependent enzymes, their associated cytochromes, and members of this family are clustered. Note that one to three closely related Zn metallohydrolases may occur; this family represents a specific clade among them. Some members of this family have a short additional N-terminal domain with four conserved Cys residues. [Unknown function, Enzymes of unknown specificity].	8.4779e-153
NZ_CP033314.1\|WP_035680264.1\|502846_504052_+\|2-methylaconitate-cis-trans-isomerase-PrpF	gnl\|CDD\|131387	TIGR02334, conserved_hypothetical_protein, probable AcnD-accessory protein PrpF. The 2-methylcitrate cycle is one of at least five degradation pathways for propionate via propionyl-CoA. Degradation of propionate toward pyruvate consumes oxaloacetate and releases succinate. Oxidation of succinate back into oxaloacetate by the TCA cycle makes the 2-methylcitrate pathway a cycle. This family consists of PrpF, an incompletely characterized protein that appears to be an essential accessory protein for the Fe/S-dependent 2-methylisocitrate dehydratase AcnD (TIGR02333). This protein is related to but distinct from FldA (part of pfam04303), a putative fluorene degradation protein of Sphingomonas sp. LB126. [Energy metabolism, Fermentation].	0
NZ_CP033314.1\|WP_035680334.1\|526338_527046_+\|hypothetical-protein	gnl\|CDD\|240074	cd04723, HisA_HisF, Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.	7.5783e-63
NZ_CP033314.1\|WP_035680261.1\|500210_502847_+\|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD	gnl\|CDD\|131386	TIGR02333, 2-methyl_citrate_dehydratase_Fe-S_dependent_AcnD, 2-methylisocitrate dehydratase, Fe/S-dependent. Members of this family appear in an operon for the degradation of propionyl-CoA via 2-methylcitrate. This family is homologous to aconitases A and B and appears to act the part as 2-methylisocitrate dehydratase, the enzyme after PrpD and before PrpB. In Escherichia coli, which lacks a member of this family, 2-methylisocitrate dehydratase activity was traced to aconitase B (TIGR00117) ().	0
NZ_CP033314.1\|WP_035680260.1\|499019_500201_+\|2-methylcitrate-synthase	gnl\|CDD\|183463	PRK12351, PRK12351, methylcitrate synthase; Provisional.	0
NZ_CP033314.1\|WP_035680254.1\|493353_494787_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226322	COG3800, COG3800, Predicted transcriptional regulator [General function prediction only].	5.40914e-150
NZ_CP033314.1\|WP_035680255.1\|495786_497703_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236378	PRK09102, PRK09102, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP033314.1\|WP_035680257.1\|497740_498832_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|236591	PRK09614, nrdF, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	5.58158e-132
NZ_CP033314.1\|WP_035680301.1\|489820_490726_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176132	cd08441, PBP2_MetR, The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold. MetR, a member of the LysR family, is a positive regulator for the metA, metE, metF, and metH genes. The sulfur-containing amino acid methionine is the universal initiator of protein synthesis in all known organisms and its derivative S-adenosylmethionine (SAM) and autoinducer-2 (AI-2) are involved in various cellular processes. SAM plays a central role as methyl donor in methylation reactions, which are essential for the biosynthesis of phospholipids, proteins, DNA and RNA. The interspecies signaling molecule AI-2 is involved in cell-cell communication process (quorum sensing) and gene regulation in bacteria. Although methionine biosynthetic enzymes and metabolic pathways are well conserved in bacteria, the regulation of methionine biosynthesis involves various regulatory mechanisms. In Escherichia coli and Salmonella enterica serovar Typhimurium, MetJ and MetR regulate the expression of methionine biosynthetic genes. The MetJ repressor negatively regulates the E. coli met genes, except for metH. Several of these genes are also under the positive control of MetR with homocysteine as a co-inducer. In Bacillus subtilis, the met genes are controlled by S-box termination-antitermination system. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.88119e-99
NZ_CP033314.1\|WP_079285668.1\|524204_525302_-\|S-layer-protein	gnl\|CDD\|163144	TIGR03123, one_C_unchar_1, probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages. [Central intermediary metabolism, One-carbon metabolism].	8.37862e-108
NZ_CP033314.1\|WP_014242213.1\|521658_521739_-\|pyrroloquinoline-quinone-precursor-peptide-PqqA	gnl\|CDD\|273976	TIGR02107, Coenzyme_PQQ_synthesis_protein_A, coenzyme PQQ precursor peptide PqqA. This model describes a very small protein, coenzyme PQQ biosynthesis protein A, which is smaller than 25 amino acids in many species. It is proposed to serve as a peptide precursor of coenzyme pyrrolo-quinoline-quinone (PQQ), with Glu and Tyr of a conserved motif Glu-Xxx-Xxx-Xxx-Tyr becoming part of the product. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0.00343478

>NZ_CP033314.1|WP_035680267.1|504083_504944_+|isocitrate-lyase/PEP-mutase-family-protein
MSTRKSLKTLVEARRGAIVPGAFNALSAKVVEDLGFEAIYVTGAGVTNMWFGMPDQGFMGLAEIADHTARIRDAVSVPLIVDADTGFGNALNVYHTVRTLERAGADCIQLEDQMAPKRCGHFSGKDVISTEEAVSKIKAAADARRDADLLIMARTDAAAVHGFEAAVERAQRFAEAGADILFVEAVTTAGDIRALPRRLEKPQLMNMVIGGRTPIVNATELAELGYGIVLYANAALQGAVAGMQKALTVLRDDKEVKESSGLVTPFAERQRLVGKPGWDALEKIYS
>NZ_CP033314.1|WP_035680264.1|502846_504052_+|2-methylaconitate-cis-trans-isomerase-PrpF
MAFAPQIRIPATYMRGGTSKGVFFRLDDLPERCRVPGEARDRLFLRVIGSPDPYAKHIDGMGGATSSTSKCVILSKSARPGHDVDYLYGQVAIDAAFVDWSGNCGNLSTAAGAFAIHAGLVDPARVPESGVCTVRLWQANIGKTIIAHVPVADGAVRETGDFELDGVTFPAAEIVLEFIDPADEGDGEGGGAMFPTGNLTDELDVPDSLVPGGRLTATLINAGIPTIFVNAVDLGYRGTELQDAINGDADALFRFETLRTIGALHMGLIREAGEAARRQHTPKIAFVAPPDAYTASSGKRVEAGDIDLLVRALSMGKLHHAMMGTASVAIAAAAAVPGTLVNRAAGGGERNAVRFGHPSGTLRVGAEAALVDGRWTVTKAIMSRSARVLMEGWVRVPADSF
>NZ_CP033314.1|WP_035680261.1|500210_502847_+|Fe/S-dependent-2-methylisocitrate-dehydratase-AcnD
MNTAHRKPLPGTPLDHFDARTAVNALRPGAWDGLPYVSRVLAEQLVRRCDPALLDDALRQLVERRRDRDFPWYPARVVCHDILGQTALVDLAGLRDAIAEQGGDPAKVNPVVPTQLIVDHSLAVEYGGDDPQAFEKNRAVEDRRNEDRFHFIDWTKRAFENVDVIPAGNGIMHQINLETMSPVIQVRDGVAFPDTCVGTDSHTPHVDALGVIGIGVGGLEAETVMLGRASMMRLPDIVGVRLTGARQPGITATDLVLALTAFLREQRVVGAWIEFFGEGAAGLSIGDRATISNMCPEYGATAALFHIDQQTVDYLTLTGRAPEQVALVETYAKTLGLWADALRTAEYERVLAFDLASVERTMAGPSNPHRRLPTSALKERGIAVGLDTAQEEERAGLLPDGAVVIAAITSCTNTSNPRNVVAAGLLAKKANALGLVRKPWVKTSFAPGSKVARLYLEEAGLLAELERLGFGIVAYACTTCNGMSGALDPAIQREIVDRDLYVTAVLSGNRNFDGRIHPHAKQAFLASPPLVVAYAIAGTVRFDIERDALGVDRNGKRITLKDLWPSDAEIDAIVASCVRPEQFRAVYDPMFAANRDGVEKTSPLYDWRSASTYIRRPPYWDTEGVGALAATPRTLTGMRPLAMLPDNITTDHLSPSNAILANSAAGEYLARMGLPEEDFNSYATHRGDHLTAMRATFANPQLVNEMAVVDGAVRKGSLTRLEPDGTVMRMWEAIETYLERRQPLIVIAGADYGQGSSRDWAAKGVRLAGVEAIAAEGFERIHRTNLIGMGVLPLEFKPGTTRLTLGLDGSETYDVTGERRPHADLTLVVHRRDGGALRVPVTCRLDTAEEVSIYEAGGVLQRFAQDFLASESAQKGAA
>NZ_CP033314.1|WP_035680260.1|499019_500201_+|2-methylcitrate-synthase
MTTTAPETTAPAAFKPPFKAKKSVALSGVTAGNTALCTVGKSGNDLHYRGYDILDIAERCEFEEVAHLLVHGKLPTFAELKAYKAKLKSLRGLPTNVRQALECLPASAHPMDVMRTGVSALGCALPEKDDHNIPGARDIADRLMASLGSMLLYWYHWSTNGRRIEVETDDESIGAHFLHLLHGRKPSALWERAMHTSLILYAEHEFNASTFTGRVIAGTGSDLYSAITGAIGALRGPKHGGANEVAFEIQKRYDTPDEAEADIRRRVENKEVVIGFGHPVYTVSDPRNDVIKGVAHKLSVDAGSTRMFDIAARLEAVMWEVKRMFPNLDWFSAVSYHMMGVPTAMFTPLFVIARTSGWAAHIIEQRIDNKIIRPSANYVGPDDRVFVAIDQRQ
>NZ_CP033314.1|WP_035680257.1|497740_498832_+|ribonucleotide-diphosphate-reductase-subunit-beta
MSSLLHINPVSLIGTGRVGLLQGSAAYNVSRYPWAYAYWKKQQQVHWMGEEVPLGEDIKDWTSDRVTDGERNLLTQIFRFFTQSDVEVSDNYLKRYMPIFQPLEVQMMMAAFTNMETVHIDAYALLLTTIGMPETEFAAFRDYAEMRDKADYMHSFGVGTVADVSRTLAMFGAFTEGMALFASFAMLLNFPRHNKMKGMGQIVTWSVRDESLHCEGIIRLFHEWNRETGAMTPAVRDDILDVCRTMVGLEERFIDLAFGLGAVEGMTPEDIRAYVHYIADWRLTQLRLPTLYGYFKPVDGGYEPVKPHPLPWLVEILNGVEHANFFEQRATEYSKGATSGQWDGTDGVWAAFDRLRAPGAAAS
>NZ_CP033314.1|WP_035680255.1|495786_497703_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MPALAQDLAQDFANGFDRHGNLLTLPRRTPERSGGRAPAERWTPPDPSVIRIDRSRDARLTAFGKATLDDRYLLPGESYQDLFARVAAAYADDAAHAQRLYDAISRLWFMPATPVLSNGGTTRGLPISCFLNAVPDSLDGIVDIWNENVRLASNGGGIGTYWGGVRSIGEPVKGCGSTSGIIPFIRVMDSLTLAISQGSLRRGSAAVYLDIHHPEIEEFLEIRKSSGDFNRKSLNLHHAVIVTDAFMQAVRDDRPFALISPKTGAVLKHVNARQVWQKILEARMQTGEPYLLFGDTVNRALPKHQRDLGLRVSTSNLCSEITLPTGKDHLGKERTAVCCLASMNLETWDEWNGEEGLVEDVLRFLDNVLTRFIEEAPEGMENAVYSAMRERSVGLGVMGFHSFLQARGIPFESAMAKVWNLRFFRKIRRDADAASVLLAEERGACPDAAERGIKARFSHKLAIAPTASISIICGGTSACIEPIPANVYTHKTLSGSISVRNPHLEKLLAAKGADRPEVWQSIIEHEGSVQHLDLLSNDEKAVFRTAFEIDQRWIIEFAADRTPFICQSQSINLYLPGDIDKWDLHMLHWTAWEKGLKSLYYCRSKSVQRAAFAGKDRAAGPAAMQAPRTDYEECLACQ
>NZ_CP033314.1|WP_079285186.1|494931_495315_+|hypothetical-protein
MRRRIRSALKRLGPLEGPAHAHVLTLAPKPEAVATVPAALAGLDGAIERIAKRPFSPRQIEEALGITARERLRWTKDGRLPQSGSATIMRGQRITLSTYAVDTVAKLAGDASIIDDWRRTDRLGNLG
>NZ_CP033314.1|WP_035680254.1|493353_494787_+|helix-turn-helix-transcriptional-regulator
MAKAFMGVRLQRLREERGLTQTALARILEISPSYLNQLERNQRPLTVPLLLRINAAFGIDVQIFSEDEEARLVADLREALSEAGTGETIAMAEIKALATNMPAVGRALVALHRRGRGLTERLDALASGVVPAGPDSGLPPPMPYEEVRDFFYRHHNHIGALDEAAERLFGEAGLEIGAVDRGLERLLADRHGIRTLVTDDTAMPEGALRQYDGDARTLRIARSLEPGRRAFQMATQLAFHQEPPLLHRLVEEGRFSGPQARSLARIGLANYYAGAVVMPYRAFRETAEAVAYDIELLGQRFGTGFETVCHRLSTLQRPGMPGVPFFFVRVDRAGNMSKRQSATSFHFSRVGGTCPLWNVYEAFSMPGRLLTQLARMPDGRAYLWIARTVVHGRSGYGAPSKSFAVGLGCDIQHAGRLVYSRGLALGDPDAATPIGAGCKVCERPSCPQRAFPPIGRTVTVDESLSRFEPYPVAQPPV
>NZ_CP033314.1|WP_035680251.1|490847_493154_+|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MATTHTLGFPRIGAKRELKFALEAYWKGASSRDELVRVGADLRKRHWQDQGALDLVPVGDFAFYDQVLDMSFTLGNLPERVRGYHGDSLDNYFRVARGRSAETAEDHGGCCGGVAAGEMTKWFDTNYHYIVPEFDAETQFNLDASRLLEQLAEAEEQGVKAKPVIIGPVTYLALGKAKDGSDKLALLPRLLPVYAELLQALADQGVEWVQIDEPILVTELEAAWRDAFTQAYQTLGTGTVKLLLATYFGQLQENLPLACALPVQGIHLDAINARDEVDALIQSLPADRVVSLGVVNGRNIWKTDLHATLDWLEPVAEGLGERLWIAPSCSLLHVPVDLAGERKLDEEVRSWLAFAVQKLEEIRVLATALTQGRDGGRAAVAAELEANRAAIEARRHSPRVNNLAVKAAVAAIDAQLGRRKSAFAERAAKQAARLNLPKFPTTTIGSFPQTKEIRQARSQFKAGTIDAAAYTEAMRGEIARSVREQEALGLDVLVHGEAERNDMVEYFGEQLDGYVFSQSGWVQSYGSRCVKPPILFGDISRPKAMTVDWITYAASLTDKPMKGMLTGPVTILNWSFVRDDQPRSDSCRQLALAIREEVLDLEKAGVGVIQIDEAALREGLPLRKSQWQGYLDWAVESFRITANGVADETQIHTHMCYSEFNDIIASIAAMDADVITIETSRSDMELLDAFDDFKYPNEIGPGVYDIHSPNIPTEEHIVGLMKKAAERIPADRLWVNPDCGLKTRQWAEVLPALTNMVSAARTLRATIA
>NZ_CP033314.1|WP_035680301.1|489820_490726_-|LysR-family-transcriptional-regulator
MLERIHLSIIREVDRHGSLTAAASHLNLTQPALSHAIRKLEEQLGVDVWHREGRSLRPTQAGEWLLAVANRLLPQLAHAEERLQQFAQGERGTLRIGMECHPCYQWLLKIVAPYVDAWPKVDVDVRQKFQFGGIGALFGHDIDMLVTPDPLFKPGLCFEPVFDYEQVLVVGPGHRLRHAAFVEPQQVADEVLITYPVAPDRLDIYTQFLMPAGISPRQHKPIETTDIMLLMVAHGRGVAALPRWLVEEYGAKFNVSPVRLGRDGVAKQIFLGFREADADIGYLRGFIDLALAHRDGTTAQL
>NZ_CP033314.1|WP_035680320.1|520680_521514_+|riboflavin-biosynthesis-protein-RibD
MAACVLRLFPGPPEEVALAGLYVADALHRLGSASAPFVYASFVGSLDGRIALQDGEANHLPVEITSENDFRLFLELQAQADCLVTHGGYLRDLAAGRLDDVLQIGTRAVDRDLVRWRLENGLSAQPAIVIASASLDFPIPASVIRKKQRVLIATGRQAPQDRVDAFCARGYPVIIAGDGASVEGAPLVRELGTLGFRSVYLLTGPRMLSTMLRDGMLSRLYLTIAHRVVGGESFHTMATGPRLEAAGRLRLSSLYYDSAAPDGAGQWFARFEPLRPA
>NZ_CP033314.1|WP_014242213.1|521658_521739_-|pyrroloquinoline-quinone-precursor-peptide-PqqA
MKTWRKPKIRVIAVGTEINAYACAQL
>NZ_CP033314.1|WP_079285675.1|522029_522368_+|hypothetical-protein
MRNGVPVALLALLIGCGTAQAEDGYPTYARVDYVLGCMLSNGQGPDVVRKCSCSIDEIAAHFPYDSYVAVETARGMQEAPGERAALMRDVGWIKDLLNEFRQAQVAADLKCF
>NZ_CP033314.1|WP_035680326.1|522392_523223_-|quinoprotein-dehydrogenase-associated-SoxYZ-like-carrier
MTTPHRTIVTLAGPALAGAAWLCLGSAGALAASPQEERWDMLRDMYFAGRAVEDAGPLLSLEAPKRANDAAVVPVRIVTAPGSGVEVTAVHLIVDENPVPMAATFRFAHGNSPQAIDTRLRVNAYTNITAVAETGDGRLLRTTQFVKASGGCSAPALKNAQLAVARMGKMKLNLPDGITAGKPMTAQLLISHPNYTGMQYDQLNYYFIPAHYVKTVAIRYNGAPVLDVQSDISLSEDPSIHFSLVPEEQGTLDVTAEDSNGRIFQESWPIRANSGS
>NZ_CP033314.1|WP_035680329.1|523227_524199_-|quinoprotein-relay-system-zinc-metallohydrolase-2
MQDRTMAAAATFLRPSTRAALAGVWLFVWLLWAAPATADPLPVFEVAPGVFVHAGRHEETDAANAGDIANCGFVVGDDAVAVIDSGGSPIVGHRLREAIRVHTDLPIRYIVNTHMHPDHILGNVAFLPDRPDFVAHGNLQAALVARGEHYRQAFDAAVGAAAAAEVRIIPPTLVVSDRLELNLGGRVLDLVAWPVAHTDNDLTVLDRQTKTLWAGDLLFMERAPAIDGSVLGWLRTLDALAVEPAARVVPGHGPPSAPWSDAAGDLRRYLSRVVEGVRKVQAAHGTIQQAVETVAADEAPHWRLFESYNPRNVTAAFAELEWE
>NZ_CP033314.1|WP_079285668.1|524204_525302_-|S-layer-protein
MDGGALIGLDIGGAHLKAALFDETGTLRDLDQWPCPLWLGLGRLEQAVAAVVARWGQPCHVAATMTGELADLFDDRADGVRRIAATLRSALPATTLSVFAGPRGLVPVDAAPDCAEAVASANWYATALLAAAGGDGVLLDVGSTTTDIVPLVGSGPLHAGYSDAERLDSGELVYTGVVRTPVMAVARTVPYGGGRRALMAELFATMADVHRLTGTLPEGADQHPTADGRDHGVAASARRLLRMVGDDLELGGLPKALRLAGHLAERQLRQIEDALDQVLSRGLMADAPPLVGAGVGRFLVRRLAERRGSAYRDFEAHLPVAPALRERTGWFAPAVSVGWLAFDGAPHKHLCPVAGSADAVSYLPD
>NZ_CP033314.1|WP_079285676.1|525305_526304_-|ATP-grasp-domain-containing-protein
MHILVCEFVTGGGMPPDTAIPASLAREGNLMLHALLADLLEVPGVEVTVTRDARLPPLASPVRSITITDPRESWSLWEDLARQADGVWPIAPETDGALERFSRTVEVTGRHLLNSRADAVAVASSKAATAALLAAAGLPVVPVWRVRAVVADGPPGNGPWVVKPDDGAGCIDTRLIRDHADWRGWLAEADRSGFVVQPFQPGTPASLSMLCRDGRAWPLTANRQNVSLSGGRFSYGGGIVGGMALSPALTDLAQGVAVALPGLFGCVGVDVIVGPDGPTIIEVNPRLTTSSVGMRRATGLNVAAAVLDLSRDPPIPPPPVTRIEPILLTLEG
>NZ_CP033314.1|WP_035680334.1|526338_527046_+|hypothetical-protein
MFHVVPVIDLREGGVVHARRGDRGRYPPLRSLLCAGNDPVAVVGGLLRLHPFPVVYAADLDAIQGTGDNRPALARLKAAFPDVGFWVDAGFRSADAVRGFVASGLGDAVLGSESLDGFAPLTALKASPAWERVILSLDFRDRFVGLPDLLERPDLWPRRIIAMTLARVGSGEGPDWSRLAEIGRTKPQASLFAAGGVRNGDDLRDLAAHGSAGALVATALHDGRIGGADLDALSR
>NZ_CP033314.1|WP_014242220.1|527051_527573_-|formaldehyde-activating-enzyme
MWGGQSTKINRVLVGESLVGDGNEVAHIDLIMGPRGSAVETAFCNALTNNKDGFTALLAVVAPNLMCKPATILFNKVTIKGAEQAVQMFGPAQHAVAKAVADCVSEGTIPQDEIDNIFICVGVFIHWEAKDNAKIQDYNYRATKEAIERAVASFPSAQDLMSQKDKVKHPFAA
>NZ_CP033314.1|WP_051140751.1|527640_528519_-|hypothetical-protein
MIDWAPIPPDPASGVAGAYRAACHLELRALKPGNVHIHAEGHGMTVDQFLASAEATAPILAWPGLSVGERLHAAVRATREAVGCNTNLGILLLAAPLAQAALMPGNAPLRERLGHVLASLTVADADLAFQAITLAEPAGLGRVEGADVHAPARVTLLDAMREAQDRDTIARQYATGFADVFDTGVPSLRRWLEAGAEFEQATEMIYVEFLATLPDSHVIRKYGRERSEWLRARASELRENTAPDRAFTLTRSRLAELDRDLKYNGVNPGTTADIVVGCLFALWLMQSRSHPS

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Crispr_ID: NZ_CP033314_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033314_3

634674-634875

Orphan

Consensus_repeat	Method
ACCCTCTCCCCTCCGGGGAGAGGGTTA	PILER-CR
CCCTCTCCCCTCTGGGGAGAGGGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP033314_3

>merge|NZ_CP033314|3|634674-634875|PILER-CR,CRISPRCasFinder
ACCCTCTCCCCTCTGGGGAGAGGGTGGCCCGAAGGGCCGGTGAGGGGGGTGCGCGTAACGGTACGTCCGGCAAAAGCGCAACCCCTCTCCCCTCCGGGGAGAGGGTTAGGGTGAGGGGGTTGCGCTTATGCCGGACGTTCCGCCACGCGCAACCCCCTCACCGGCCCTGCGGGCCACCCTCTCCCCTCCGGGGAGAGGGTTA

>NZ_CP033314|3|2|634674-634875|PILER-CR
ACCCTCTCCCCTCTGGGGAGAGGGTGG	CCCGAAGGGCCGGTGAGGGGGGTGCGCGTAACGGTACGTCCGGCAAAAGCGCAA
CCCCTCTCCCCTCCGGGGAGAGGGTTA	GGGTGAGGGGGTTGCGCTTATGCCGGACGTTCCGCCACGCGCAACCCCCTCACCGGCCCTGCGGGCC
ACCCTCTCCCCTCCGGGGAGAGGGTTA

>NZ_CP033314|3|1|634675-634779|CRISPRCasFinder
CCCTCTCCCCTCTGGGGAGAGGGT	GGCCCGAAGGGCCGGTGAGGGGGGTGCGCGTAACGGTACGTCCGGCAAAAGCGCAAC
CCCTCTCCCCTCCGGGGAGAGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033314.1\|WP_035679531.1\|631656_632169_+\|tripartite-tricarboxylate-transporter-TctB-family-protein	unknown	unknown	gnl\|CDD\|377815
NZ_CP033314.1\|WP_035680502.1\|636328_637822_+\|acetyl-CoA-hydrolase/transferase-family-protein	unknown	unknown	gnl\|CDD\|274588
NZ_CP033314.1\|WP_107685978.1\|640757_641549_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377448
NZ_CP033314.1\|WP_051140768.1\|645000_645408_-\|EF-hand-domain-containing-protein	unknown	unknown	gnl\|CDD\|238008
NZ_CP033314.1\|WP_059399493.1\|630599_631565_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270234
NZ_CP033314.1\|WP_035679529.1\|632217_633762_+\|C4-dicarboxylate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225870
NZ_CP033314.1\|WP_059399542.1\|634877_636047_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP033314.1\|WP_051140765.1\|639474_640656_-\|OpgC-domain-containing-protein	unknown	unknown	gnl\|CDD\|378405
NZ_CP033314.1\|WP_035679569.1\|623545_624349_+\|cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl\|CDD\|378238
NZ_CP033314.1\|WP_035679534.1\|628847_629840_+\|2-dehydro-3-deoxygalactonokinase	unknown	unknown	gnl\|CDD\|377446
NZ_CP033314.1\|WP_035679533.1\|629845_630496_+\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	unknown	unknown	gnl\|CDD\|181670
NZ_CP033314.1\|WP_035680505.1\|637898_638714_-\|esterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP033314.1\|WP_079285552.1\|633758_634673_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP033314.1\|WP_051140767.1\|643728_644874_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223194
NZ_CP033314.1\|WP_059399492.1\|625094_627764_-\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP033314.1\|WP_035679536.1\|628044_628884_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP033314.1\|WP_059399541.1\|641601_643701_-\|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|239167
NZ_CP033314.1\|WP_051140764.1\|638710_639478_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238860
NZ_CP033314.1\|WP_059399540.1\|645530_647432_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|227903
NZ_CP033314.1\|WP_035679568.1\|624354_624948_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_CP033314.1\|WP_035679531.1\|631656_632169_+\|tripartite-tricarboxylate-transporter-TctB-family-protein	gnl\|CDD\|377815	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family. This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.	5.25954e-09
NZ_CP033314.1\|WP_035680502.1\|636328_637822_+\|acetyl-CoA-hydrolase/transferase-family-protein	gnl\|CDD\|274588	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase. This family of CoA transferases includes enzymes catalyzing at least two related but distinct activities. The E. coli YgfH protein has been characterized as a propionyl-CoA:succinate CoA transferase where it appears to be involved in a pathway for the decarboxylation of succinate to propionate. The Clostridium kluyveri CAT1 protein has been characterized as a acetyl-CoA:succinate CoA transferase and is believed to be involved in anaerobic succinate degradation. The propionate:succinate transferase activity has been reported in the propionic acid fermentation of propionibacterium species, where it is distinct from the coupled activities of distinct nucleotide-triphosphate dependent succinate and propionate/acetate CoA transferases (as inferred from activity in the absence of NTPs). The family represented by this model includes a member from Propionibacterium acnes KPA171202 which is likely to be responsible for this activity. A closely related clade not included in this family are the Ach1p proteins of fungi which are acetyl-CoA hydrolases. This name has been applied to many of the proteins represented by this model, possibly erroneously.	0
NZ_CP033314.1\|WP_107685978.1\|640757_641549_+\|hypothetical-protein	gnl\|CDD\|377448	pfam05050, Methyltransf_21, Methyltransferase FkbM domain. This family has members from bacteria to human, and appears to be a methyltransferase.	6.22147e-07
NZ_CP033314.1\|WP_051140768.1\|645000_645408_-\|EF-hand-domain-containing-protein	gnl\|CDD\|238008	cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.	0.000479357
NZ_CP033314.1\|WP_059399493.1\|630599_631565_+\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	3.64402e-109
NZ_CP033314.1\|WP_035679529.1\|632217_633762_+\|C4-dicarboxylate-ABC-transporter-permease	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	2.25769e-177
NZ_CP033314.1\|WP_059399542.1\|634877_636047_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	1.92442e-141
NZ_CP033314.1\|WP_051140765.1\|639474_640656_-\|OpgC-domain-containing-protein	gnl\|CDD\|378405	pfam10129, OpgC_C, OpgC protein. This domain, found in various hypothetical and OpgC prokaryotic proteins. It is likely to act as an acyltransferase enzyme.	5.3948e-122
NZ_CP033314.1\|WP_035679569.1\|623545_624349_+\|cytochrome-c-oxidase-assembly-protein	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	4.44875e-33
NZ_CP033314.1\|WP_035679534.1\|628847_629840_+\|2-dehydro-3-deoxygalactonokinase	gnl\|CDD\|377446	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase. 2-keto-3-deoxy-galactonokinase EC:2.7.1.58 catalyzes the second step in D-galactonate degradation.	1.10393e-110
NZ_CP033314.1\|WP_035679533.1\|629845_630496_+\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	gnl\|CDD\|181670	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed.	1.02129e-97
NZ_CP033314.1\|WP_035680505.1\|637898_638714_-\|esterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	4.44682e-21
NZ_CP033314.1\|WP_079285552.1\|633758_634673_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.24587e-82
NZ_CP033314.1\|WP_051140767.1\|643728_644874_-\|RNA-methyltransferase	gnl\|CDD\|223194	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].	4.45971e-90
NZ_CP033314.1\|WP_059399492.1\|625094_627764_-\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP033314.1\|WP_035679536.1\|628044_628884_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.32925e-65
NZ_CP033314.1\|WP_059399541.1\|641601_643701_-\|molybdopterin-oxidoreductase-family-protein	gnl\|CDD\|239167	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP033314.1\|WP_051140764.1\|638710_639478_-\|hypothetical-protein	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	5.90532e-08
NZ_CP033314.1\|WP_059399540.1\|645530_647432_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|227903	COG5616, COG5616, Predicted integral membrane protein [Function unknown].	1.69572e-21
NZ_CP033314.1\|WP_035679568.1\|624354_624948_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.36552e-10

>NZ_CP033314.1|WP_079285552.1|633758_634673_+|SMP-30/gluconolactonase/LRE-family-protein
MTTSTSIGLEAVFDPDLRNGTGENPVWDAERNSWTWIDIPARTIHRLDPSSGAHRRWTLPEMIGSLVLRPDGGVVCACETGIFDVDLPGEGGEAVVTTLATHRFPKEGMRFNDGRCDRQGRFWLSSMVMDISKGDSSGLWHRFTRADGLTETGTGGYIIPNGSAFSPDGRTLYASDSHRDVRMVWAWDYDTDTGTAANRRPFVDMRAMVGRPDGAAVDVDGCYWICCLDEGCIKRFTPNGDLDRRIEVPMRKPTMCAFGGPDLRTMLVTSLSRGPADLAEDPHGGRVLMFYPGAQGLPEPRLTV
>NZ_CP033314.1|WP_035679529.1|632217_633762_+|C4-dicarboxylate-ABC-transporter-permease
MYELDMLLHGAQALFNQPMALLLALFGVTLGIIIGALPGLTATMGVAILLPFTFGMDPLSGLLMISGVFFGGIYGGSVTAILLKIPGTPAAAATAIDGFELTKKGQAGIALGTATFSSFLGGTASVFVLIFLAPVLARFALEFSASESFALAVFGLSIIASISGVSVIKGLISGFLGLLLATVGLDPMGGFPRYTGGYTELFNVPFIPVMIGLFAAAEAFKSLEDPQVRAGMAAALDRIIPPWHMFRRQLGNIARSSGLGIIIGMIPGAGADIAAFVAYNEAKRFSKTPENYGKGELGAVAACESGANGCTGGALLTMLTLGIPGDAVTAVMLGALTLQGLQPGPLLFKDHADLVFTLFAGMLVCYVFMLVVGLGSLRFMGRILQMPKSVLTPCILALCIVGTYAINNSMFDIWIMLAAGVVGYFMQKWDFPASPVVLALIMGPMAEANFRRALSLSGGSYDFLYTRPITAVLLTIAILTLMLPLLRRLWAQRSPGGPTTINPAAGSSRMGTPE
>NZ_CP033314.1|WP_035679531.1|631656_632169_+|tripartite-tricarboxylate-transporter-TctB-family-protein
MSNAPAPGGKIGLRPQDRLATLVIAVLVMAVAVAAIIVAGDFPPTMLETDVGPARFPIIFAVALLVLCAILVFNTLRAPAAPPDDPAQAEPKASYGTVAIGIVATAACLYAMEFVGYAIATPIYLFGLMWLMGRRNLIANAAIAAVLTALIYAAFAVALSVPLPVGSLFE
>NZ_CP033314.1|WP_059399493.1|630599_631565_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKGYRFVTGAVVGALTSATMMVAVQAAEYPTKAIELIVPYAAGGGTDLVARAYADAVNRHLPQSVGVVNKTGGGGAVGLSEIMAARPDGYRIGMGTVEITTLPNLGVARFTADDFTPIARLNAEPSAITVNANAPWKTIEEFLAYAKENPGKVRIGNSGTGAIWHLAAEALATKSGLKFSHIPYDGANPAVTALLGNHIEAVSVSPAEVSSHIAAGTLRILAVMDDQRSKAFPDAPTLKEKGIDVTVATWRGIVVPKKTPANIVETLRAASKKAVEEQGFRDQLTKMNLSYAYLDGPEYKVAMEKDAEMFKVLMKQIGLSK
>NZ_CP033314.1|WP_035679533.1|629845_630496_+|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase
MSDDSIKARFDAAFSALPLVAILRGLTPAEAEGVAQTLYDSGFRMIEVPLNSPDPFTSIAAVRRLLPRDALVGAGTVLAVEQVARLKEIGADLVVMPHADTAVIRAAKAAGLVSLPGIATPTEAFAALSAGADALKIFPAELVGPRIIKAMRAILPAGTRLLPVGGIAPDTMAPFLEAGVAGFGLGAALYAPGLSAAEVGERADAFVAAWRRLNPR
>NZ_CP033314.1|WP_035679534.1|628847_629840_+|2-dehydro-3-deoxygalactonokinase
METGRTGVGASLIALDWGTSSLRGFLMGRDGRVLDQRANAHGIQNLPMPGIAGFEQAFADLCGDWLSAHPGLPVVAGGMVGSAQGWREAPYVRCPADTTTLASQAIPVESASGSRILIAPGVLYDPPSGPPDILRGEEIQIAGVLADRPDWGRDACMVLPGTHSKWVEIVGGRMIRFSTYMTGETFAVLCKHSILGRLMPADAAPAEAESDAAFAEGVRAAQAGGPGDFTHQIFAARTLGITRRMPEELLKDYLSGLLIGHELVSGLGHMRNELHEGRPLLLIGEGALCRRYVRGLELLGVEPTDRLENTAPRGLFQFAVAAGLIAPAGE
>NZ_CP033314.1|WP_035679536.1|628044_628884_+|IclR-family-transcriptional-regulator
MAGIGANPLDAQASPEKPQASGTQTLMRGLALLECVAAGIGDVKGIAARLGTPRSTTHRMLNSLTQDGYLHHVPYKGYLLGPKLIALGMRALEQRPLVAIARPHIEELARQTGDTVHLGVVEGAEVFYLDKIPNTRGLEMRSRIGLRMPLASTGLGKALLLGLPRERWPALYDQALRLTAAAPERPPLAPWPEFESRLAAYVDRGWSFDLEENEIGIRCVGAPIRDVRNQVVAAISVASAVPYMPDERMEELGPVVRAVADAISKDLGWKRDERASGHR
>NZ_CP033314.1|WP_059399492.1|625094_627764_-|ATP-dependent-chaperone-ClpB
MDFGLFTDRARGVIQAAQLAALAGRHQQLVPEHLVKALVEDADGVPAKLIRDAGGDPELLKTAAEETLNRQTRVDGEGPHPIFMSPALAGVLQNAVETARGAGDKFVSPERLLESLAAQGGSTRALFHRAGVDPAVLVEGVESLSKNHPADRQEDAQMGEALAKYARDLTEEARQGRLDPVIGRDDEIRRTIQVLARRTKNNPVLIGEPGVGKTAVVEGLAQRLASGDVPEGLKDRRVLALDLTALLAGAKFRGDFEERLKAVLAEVQQAAGRIILFIDELHSLIGAGRTDGAMDAANMLKPALARGELRCVGATTPDEYRKYIEKDAALARRFQPVNVDEPSDEDAVSILRGIKGKYEVHHGVRIADAAVVAAVQLSARYIADRRLPDKAIDLVDEAASRLRMAIDSKPEALDAVGRRVAQLKIEREALKSEPDAASQERLHKLESELAVDEAKLTAMEEEWRVGQSRRTEGRRLKEELDQARTKLEHAQRDGDWAKAGELAYGVVPDLEKRLAEAESRANAEREEVTAKDIAAVVTRWTGIPVDRMLDSERQRLKGMEDRLAERVVGQAEAVRAVSKAVRRARAGLKDPNRPTGSFLFLGPTGVGKTELAKALAAFLFDDETAVTRVDMSEYMEKHSVARMIGSPPGYVGYDDGGTLAEKIRRRPYQVVLLDEVEKAHPDVLNVLLQALDDGRLTDGQGRTADFRHAILIMTSNLGADALTALGEDDSLEGARIEVMDAVRRAFRPEFLNRLDDVLIFRRLGREQMAYIVDIQLARVADRLAERGLSLTADDAARARLADLGWDPAFGARPLKRAVQNLVEDPIAERLLDGEVDERSPLHLSARDGRLTLDGVPVEEDRATGFKAPERPPLGFALTGGGGRSSAAVH
>NZ_CP033314.1|WP_035679568.1|624354_624948_-|methyltransferase-domain-containing-protein
MSGRNGYGENATALTEQYESVAFADVHRDVLHLFPSRPSHILDIGAGTGRDAAALSRLGHDVTAVEPTVELRSAGMRIHAATPIRWIDDSLPELAMVRSDGRRYDVILLTAVWMHLDEAQRGIAMPHIASLLNPNGRIVMSLRHGPVPAGRTMYDVSAAETIELAASVGLRCIHRNDREDMLGRGDVSWSFLGLEAR
>NZ_CP033314.1|WP_035679569.1|623545_624349_+|cytochrome-c-oxidase-assembly-protein
MLTETLPSIIPYCGAPPVPEGFWSAWNGDPVLLSVFALTAAGYAVVVRRHGAGMARHQPWCFAAGWLVLFAAFVSPLCNLTSALFSARVVQHLLTIQVAAPLLVLSWPMGMVRWPRWTRVLASPLAVPEIAWGLFGLFLWVWHLPGPYMAALRFDAVLWVMHASLLVGAVAAWRTVLAPDDAAMRGRGLLSAFGTSVHLAILAALLIFAPQPLFVYHLETTAPWGLSALADQQLGGLIMGVVGAAVYVAINLYALARWLMVAERQRL
>NZ_CP033314.1|WP_059399542.1|634877_636047_-|pyridoxal-phosphate-dependent-aminotransferase
MRFSSLTDRIRGDRVAAWDIHFAAWTAKGRGEDVIVLSVGDPDFDTPAPVRDAAIAALHAGDTHYTPIPGRPELRAALARDVARRTGLPVEPENVIVCAGAQNGLFNATLCLVEAGDEVLVPEPMYLTYEACVRASGATLVPVAPDAATLRLDPAALAAAVTPRTRAIFLATPANPTGIVMSAEELEAVADLARRHDLWVVADEVYASLTFDRPHVSIATLPGMAERTVTINSLSKSHAMTGWRAGWVVAPAPLVAHMGTLALCMLYGLPGFVQQAALVAVEQGDEAVASMREGYRRRRDIALEALGSVPGLRCLKPEAGMFMLVDVRGTGLPTMEFAWRLFRETGVSVLDAGAFGPAAAGCVRLSFAVGEAELAEACRRIAAFVTGLA
>NZ_CP033314.1|WP_035680502.1|636328_637822_+|acetyl-CoA-hydrolase/transferase-family-protein
MYRDRIRLKSLWGKVVTPEEAALLIRDGMTIGMSGFTRAGDAKAVPLALAERAATERLKVTLMTGASLGNDVDRILTEAGVLARRLPFQADPVLRKAINRGEVMFVDQHLSETVELLRSRQMGPVDVAVIEACAITETGGIVPTTSIGNSATFAILAEKIIVELNLTQPLDLEGMHDVYIPTRRPFREPIPVVTAESRAGLPYIPVDPSKIAAIVVTRKQDSSATILPPDGETRNIAGHLIEFLDREVRQGRLGRSLNPLQAGIGTIANAVLHGMIDSPFHDLTMYSEVLQDSTFELFDAGKLTFASGSSITLSAGKYAEVLPKIGSYKGRLLLRPQEISNHPEVIRRLGVIGINTALECDIYGNVNSTHVNGTQMMNGIGGSGDFARNAHLAIFVTKSLAKDGKISSVVPMVTHADHNEHDVDVLVTETGLADLRGLAPRERAEAIIRNCVHPSYRELALDYHRRALQRGGHTPHLLEEAFSWHLRYQQTGSMQPA
>NZ_CP033314.1|WP_035680505.1|637898_638714_-|esterase
MIGTQAPRTRGRRAAVLSAALLSLVPFLAGLMAGPDPVKAAACAVSVQTADLAVPLPRSARALAAGRPLRIVAIGSSSTAGAGASKPEHSYPARLAEHLGARYPGLTLTVLNKGANGETGPDMLKRFPRDVLSEAPDLVIWQVAANTILRGDDPEAAEQVIRSGVRTLKDAGLDVVLMDLQYAPAMLAKPQHEEMEARIARVAAEEGVGLFHRYAVMRQWVETRQSAMSDLVGPDGIHQNDFGYDCVARTLAASLHDALSLRTAGTVSGRP
>NZ_CP033314.1|WP_051140764.1|638710_639478_-|hypothetical-protein
MKRATVLTLAFLAGLTAPTTISASVAHAASETPTDPCAVPETVYTIDGALPRAWERLKRGGALPILVLNSASSRPDTAYPVLLEKELAARMPDRKVSVTVRNAPGATAQEMLPVLNRELASSSASLLVWQVGTADAMRNIGPDSFGEALGRGIAVAQGRGADVILMDMQYSPQTTQLITFQPYLDYVEWMSQNSDVVHFPRFEMMRHWFEEGRVGFAPDSKAEKLQAYQFVHRCLGRILADTVSTMIDRAGRPAP
>NZ_CP033314.1|WP_051140765.1|639474_640656_-|OpgC-domain-containing-protein
MRDLRLDFFRGLALWFIFVDHIPGNQIAWVTMRNFGLSDATEVFVFISGYTSALVYSRILDQHGWRFAAAKVLDRCWTLYIAYLFLFIAFTAQVAYTARVFDNPLFTEEMGIAGFFADPAVSLVQALALKFRPANLDILPLYIVLLLSLPVVLPVLRRWPLALLAGSVTLYTAARILDWNLPTYPDGGVWFFNPFAWQLLFVLGATMQRLPKVAAALTRRRTVLLWLAGSYLFAALLLVTSWQIAPMAALMPVWLAEILYPISKTDLDLLRFAHFCALAYVVLQVARFDSAWLRWPVLAPVILCGRQSLQVFCLGIFLSFAGQTVLNHWSASLLAQFSVTLAGIAVMVAAARVLTWYQSVGRPPRQPASAPPAAPAAPLAPAAPLGPAKDPSA
>NZ_CP033314.1|WP_107685978.1|640757_641549_+|hypothetical-protein
MGCGTNGPMRTNACCAITAHNRFRSTAPRRRRPSEGPMMATIEEALDIAIDHHASGRLAEAETIYSRILDVDPRNAPALHLAGVLACQTDRLDTALDRLGLAVREAPGMAAYRVDHAKALTAARRWSDVAAALRPALLVLAPDSAEGWYFLALLKADVEGMEAMVVEGAVRSIARCRPALYLENDREEQSADLIAMLQGLGYRLWWHIVPIYNPANHAGNRYDAFPGVVSLNLLGLPKGRPCPMQTLPPVIGPGQSWREALTG
>NZ_CP033314.1|WP_059399541.1|641601_643701_-|molybdopterin-oxidoreductase-family-protein
MSNRTAPRLHASACPHDCPSTCALEVEVLDERRIGRIRGAADNSYTAGVICAKVARYAERVHHPDRLTQPLRRTGPKGSGQFAPISWDEALDVVADQFLEAERRHGPETVWPYYYAGTMGLVQRDGINRLRHARRWSGFFATICTNPAWAGWLAGAGKLAGADPREMAKSDLVVIWGTNAVSTQVNVMTHAVRARKERGAKIAVVDVYRTPTMEQADIPLLIRPGSDGALACAVMHVLFRDGLADRAYLASHADDPAGLEAHLATRTPEWAEAITGLPAAEIEDFARLVGRTPRSYFRLGYGFTRSRNGAVNMHAASCIPVVSGAWQVEGGGAFHSNSGIYGWNKTLIEGLDLRDPAVRMLDQSRIGPILEGDPEALAGGPPVTALLIQNTNPVTIAPDQARVRRGFARDDLFVCVHEQFMTETARMADIVLPATMFLEHDDLYQAGGNQHILLGPKLVDPPGDCRPNHAVIGELARRLGSDSHPGFAMTERELIDATLRASGHGTLVALESRRFLDVQPNFEDAHFVKGFRWPDGKFRLKPDWPKVPYAAPSTFGPVDSMPTFPDHWAVTEEADDEHPFRLVTAPARNFLNSSFTETPTSAGRERRPSLMLHPDDAAALGIAEGDRVEAANGRGAVLLHARLFDGVRRGVAIAESIWPNAAHEGGRGINSLTGADPVAPFGGAAFHDSHVRVRKADTA
>NZ_CP033314.1|WP_051140767.1|643728_644874_-|RNA-methyltransferase
MTSDTAAADRTGTDFEIFIVTAPGLESVLCAEVKAKGFRDATAIKGGVTIRGGWPEVWRANLELRGATRVLARVASFRAFHLAQLDKRARRVPWAEFLRPDVPVRVEASCKGSRIYHAGATAQRIERAITEELGAPISAEAEVSIKARIDDDLCTISVDTSGESLHKRGHKEEIHKAPLRETLAALFLHHCGYDGTEPVVDPMCGSGTFVIEAAEIAAGLHPGRSRRFAFEQLASFDDAAWQAMRSAGGNAQTPTFRFYGSDRDGGAIAMSRANAERAGVAALTDFQKHAVSDLMPPPEGPPGLVIVNPPYGARIGEKKPLFALYGALGQTLLSRFSGWRVGLVTNEASLAQTTGLPFQPSGPSVSHGGLRVTLHSTAALP
>NZ_CP033314.1|WP_051140768.1|645000_645408_-|EF-hand-domain-containing-protein
MAAKARGAFTLIVALAALTHSAATAAAASVENTRDARIFELLDDDQDGKVSMMEFKNNQMLVFYILDRNKDLALSADETFLPANVFATFAGMDGKIDTLEFLDIVDSAFKQADTNHDGYLDRQEFITLLNRVRNQ
>NZ_CP033314.1|WP_059399540.1|645530_647432_-|tetratricopeptide-repeat-protein
MLHASDEPQATDLPASTITAPLIDAALARVLASRSLRGSARGRRFLQFIVQEALAGRANRIKAYTIAMDVFDRDASFDPLLDPVVRIQAGRLRRALEHYYLTEGAADPLRIAIPKGGYVPQFSLVPVTAGADLPDEISGPASVPPRARLTLPRASLILGRRIDRPFRWLAIAAAVMSLALLLLAVAGLELVAGWRGVAPDPSRSALEGATAPAAPQRAVRGPALLVLPFTNGSGDPTLDLVANGITEDLVAALIRFDDFLVFGADTSFRYPSAPALREAVPTSHVDYLLKGSVAQTGDYIQVTATLIAAKDHRYLWSDSFRRAVTPAKLLDLRHDIAVQVARTLAQSDGVIEREEARLSDRHAPQDLSSYACLLRARQYWRQLSLVLHAEVRDCLERTTRSDPGYPEAWAALAMVTIDEARLGFNPRPSRPNPIDDGLQLAERAVTLAPDSALSHQALGLAWWLRREPQRSIAAYEQALALNPNDSAILADLGRCYSLTGEWERGIPLIREAFTRNPAQPSWYRIVIATYHYVNGRYDDALEEMRRANLGREVILGHVALAMIHGQTGNRAEAAKAVSEILRLDPNFPVKAISEFERRNIHPDIIVRIVDGLRKAGLAIPPSQTADGERLRTQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP033314_1	1.1\|276775\|44\|NZ_CP033314\|CRT	276775-276818	44	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	793627-793670	0	1.0
NZ_CP033314_1	1.1\|276775\|44\|NZ_CP033314\|CRT	276775-276818	44	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	254971-255014	0	1.0
NZ_CP033314_1	1.2\|276838\|41\|NZ_CP033314\|CRT	276838-276878	41	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	255034-255074	0	1.0
NZ_CP033314_1	1.2\|276838\|41\|NZ_CP033314\|CRT	276838-276878	41	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	793567-793607	0	1.0
NZ_CP033314_1	1.3\|276898\|51\|NZ_CP033314\|CRT	276898-276948	51	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	255094-255144	0	1.0
NZ_CP033314_1	1.3\|276898\|51\|NZ_CP033314\|CRT	276898-276948	51	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	793497-793547	0	1.0
NZ_CP033314_1	1.4\|276968\|46\|NZ_CP033314\|CRT	276968-277013	46	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	255164-255209	0	1.0
NZ_CP033314_1	1.4\|276968\|46\|NZ_CP033314\|CRT	276968-277013	46	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	793432-793477	0	1.0
NZ_CP033314_1	1.5\|277033\|46\|NZ_CP033314\|CRT	277033-277078	46	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	255229-255274	0	1.0
NZ_CP033314_1	1.5\|277033\|46\|NZ_CP033314\|CRT	277033-277078	46	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	793367-793412	0	1.0
NZ_CP033314_2	2.1\|509777\|51\|NZ_CP033314\|PILER-CR	509777-509827	51	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	84501-84551	0	1.0
NZ_CP033314_2	2.1\|509777\|51\|NZ_CP033314\|PILER-CR	509777-509827	51	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	155522-155572	0	1.0
NZ_CP033314_2	2.2\|509861\|45\|NZ_CP033314\|PILER-CR	509861-509905	45	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	84429-84473	0	1.0
NZ_CP033314_2	2.2\|509861\|45\|NZ_CP033314\|PILER-CR	509861-509905	45	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	155600-155644	0	1.0
NZ_CP033314_3	3.1\|634701\|54\|NZ_CP033314\|PILER-CR	634701-634754	54	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	762325-762378	0	1.0
NZ_CP033314_3	3.1\|634701\|54\|NZ_CP033314\|PILER-CR	634701-634754	54	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	286256-286309	0	1.0
NZ_CP033314_3	3.3\|634699\|57\|NZ_CP033314\|CRISPRCasFinder	634699-634755	57	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	762324-762380	0	1.0
NZ_CP033314_3	3.3\|634699\|57\|NZ_CP033314\|CRISPRCasFinder	634699-634755	57	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	286254-286310	0	1.0
NZ_CP033314_1	1.1\|276775\|44\|NZ_CP033314\|CRT	276775-276818	44	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	600673-600716	2	0.955
NZ_CP033314_1	1.1\|276775\|44\|NZ_CP033314\|CRT	276775-276818	44	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	65907-65950	2	0.955
NZ_CP033314_1	1.1\|276775\|44\|NZ_CP033314\|CRT	276775-276818	44	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	39505-39548	3	0.932
NZ_CP033314_3	3.1\|634701\|54\|NZ_CP033314\|PILER-CR	634701-634754	54	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	569249-569302	3	0.944
NZ_CP033314_3	3.1\|634701\|54\|NZ_CP033314\|PILER-CR	634701-634754	54	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	12637-12690	3	0.944
NZ_CP033314_3	3.3\|634699\|57\|NZ_CP033314\|CRISPRCasFinder	634699-634755	57	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	12635-12691	3	0.947
NZ_CP033314_3	3.3\|634699\|57\|NZ_CP033314\|CRISPRCasFinder	634699-634755	57	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	569248-569304	3	0.947
NZ_CP033314_1	1.2\|276838\|41\|NZ_CP033314\|CRT	276838-276878	41	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	125211-125251	4	0.902
NZ_CP033314_1	1.2\|276838\|41\|NZ_CP033314\|CRT	276838-276878	41	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	39445-39485	4	0.902
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	643029-643095	7	0.896
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	405544-405610	7	0.896
NZ_CP033314_3	3.1\|634701\|54\|NZ_CP033314\|PILER-CR	634701-634754	54	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1201156-1201209	9	0.833
NZ_CP033314_2	2.2\|509861\|45\|NZ_CP033314\|PILER-CR	509861-509905	45	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	85920-85964	10	0.778
NZ_CP033314_2	2.2\|509861\|45\|NZ_CP033314\|PILER-CR	509861-509905	45	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	154109-154153	10	0.778
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	209246-209312	10	0.851
NZ_CP033314_3	3.3\|634699\|57\|NZ_CP033314\|CRISPRCasFinder	634699-634755	57	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1201154-1201210	12	0.789
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	777518-777584	14	0.791
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	271057-271123	14	0.791
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1164122-1164188	15	0.776
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	135949-136015	15	0.776
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1390205-1390271	15	0.776
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	742144-742210	15	0.776
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	707479-707545	15	0.776
NZ_CP033314_3	3.2\|634782\|67\|NZ_CP033314\|PILER-CR	634782-634848	67	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	847322-847388	15	0.776

1. spacer 1.1|276775|44|NZ_CP033314|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	CRISPR spacer
cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	Protospacer
********************************************

2. spacer 1.1|276775|44|NZ_CP033314|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	CRISPR spacer
cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	Protospacer
********************************************

3. spacer 1.2|276838|41|NZ_CP033314|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	CRISPR spacer
ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	Protospacer
*****************************************

4. spacer 1.2|276838|41|NZ_CP033314|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	CRISPR spacer
ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	Protospacer
*****************************************

5. spacer 1.3|276898|51|NZ_CP033314|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctccggattcgcggtcgttggagccataggctgcggccggtgcgcgggact	CRISPR spacer
ctccggattcgcggtcgttggagccataggctgcggccggtgcgcgggact	Protospacer
***************************************************

6. spacer 1.3|276898|51|NZ_CP033314|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ctccggattcgcggtcgttggagccataggctgcggccggtgcgcgggact	CRISPR spacer
ctccggattcgcggtcgttggagccataggctgcggccggtgcgcgggact	Protospacer
***************************************************

7. spacer 1.4|276968|46|NZ_CP033314|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcggcggaggttcacccgcccaccatggagcgatagcccgcgggt	CRISPR spacer
ttcggcggaggttcacccgcccaccatggagcgatagcccgcgggt	Protospacer
**********************************************

8. spacer 1.4|276968|46|NZ_CP033314|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcggcggaggttcacccgcccaccatggagcgatagcccgcgggt	CRISPR spacer
ttcggcggaggttcacccgcccaccatggagcgatagcccgcgggt	Protospacer
**********************************************

9. spacer 1.5|277033|46|NZ_CP033314|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

cctgccgtccgcaccgcccggggggcgatccggcggcgagcagagg	CRISPR spacer
cctgccgtccgcaccgcccggggggcgatccggcggcgagcagagg	Protospacer
**********************************************

10. spacer 1.5|277033|46|NZ_CP033314|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

cctgccgtccgcaccgcccggggggcgatccggcggcgagcagagg	CRISPR spacer
cctgccgtccgcaccgcccggggggcgatccggcggcgagcagagg	Protospacer
**********************************************

11. spacer 2.1|509777|51|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gtggacggtgtcgagacggtgaccggcggactcggcaccgacatggtggaa	CRISPR spacer
gtggacggtgtcgagacggtgaccggcggactcggcaccgacatggtggaa	Protospacer
***************************************************

12. spacer 2.1|509777|51|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

gtggacggtgtcgagacggtgaccggcggactcggcaccgacatggtggaa	CRISPR spacer
gtggacggtgtcgagacggtgaccggcggactcggcaccgacatggtggaa	Protospacer
***************************************************

13. spacer 2.2|509861|45|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	CRISPR spacer
ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	Protospacer
*********************************************

14. spacer 2.2|509861|45|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	CRISPR spacer
ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	Protospacer
*********************************************

15. spacer 3.1|634701|54|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	CRISPR spacer
cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	Protospacer
******************************************************

16. spacer 3.1|634701|54|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	CRISPR spacer
cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	Protospacer
******************************************************

17. spacer 3.3|634699|57|NZ_CP033314|CRISPRCasFinder matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	CRISPR spacer
ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	Protospacer
*********************************************************

18. spacer 3.3|634699|57|NZ_CP033314|CRISPRCasFinder matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 0, identity: 1.0

ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	CRISPR spacer
ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	Protospacer
*********************************************************

19. spacer 1.1|276775|44|NZ_CP033314|CRT matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 2, identity: 0.955

cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	CRISPR spacer
cgttgaagccctggcccgcgctcctggagcctttgcccgccacc	Protospacer
*****************************************.*.

20. spacer 1.1|276775|44|NZ_CP033314|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.955

cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	CRISPR spacer
cgttgaagccctggctcgcgctcctggagcctttgcccgccgtt	Protospacer
***************.**************************.*

21. spacer 1.1|276775|44|NZ_CP033314|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 3, identity: 0.932

cgttgaagccctggcccgcgctcctggagcctttgcccgccgct	CRISPR spacer
cattgaagccctggcccgcgctcctggagccattgcccgccgcc	Protospacer
*.***************************** ***********.

22. spacer 3.1|634701|54|NZ_CP033314|PILER-CR matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 3, identity: 0.944

cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	CRISPR spacer
cccgaagggccggtgagggggatgcgcgtagcggtacgtccggcaaaagcgcac	Protospacer
*********************.********.**********************

23. spacer 3.1|634701|54|NZ_CP033314|PILER-CR matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 3, identity: 0.944

cccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	CRISPR spacer
cccgaagggccggtgagggggatgcgcgtagcggtacgtccggcaaaagcgcac	Protospacer
*********************.********.**********************

24. spacer 3.3|634699|57|NZ_CP033314|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 3, identity: 0.947

ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	CRISPR spacer
ggcccgaagggccggtgagggggatgcgcgtagcggtacgtccggcaaaagcgcacc	Protospacer
***********************.********.********************** *

25. spacer 3.3|634699|57|NZ_CP033314|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 3, identity: 0.947

ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	CRISPR spacer
ggcccgaagggccggtgagggggatgcgcgtagcggtacgtccggcaaaagcgcacc	Protospacer
***********************.********.********************** *

26. spacer 1.2|276838|41|NZ_CP033314|CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.902

ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	CRISPR spacer
ttcatcgccgaatcggaatcctggagcgggaacccgcggtc	Protospacer
**************************.**.******** .*

27. spacer 1.2|276838|41|NZ_CP033314|CRT matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 4, identity: 0.902

ttcatcgccgaatcggaatcctggagtggaaacccgcgccc	CRISPR spacer
ttcatcgccgaatcggaatcctggagcgggaacccgcggtc	Protospacer
**************************.**.******** .*

28. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 7, identity: 0.896

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	Protospacer
************************************************************

29. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.896

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	Protospacer
************************************************************

30. spacer 3.1|634701|54|NZ_CP033314|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.833

cccgaagggcc--ggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaa	CRISPR spacer
--gagagggttagggtgaggggggtgcgcgtggcggtacgtccggcaaaagcgcaa	Protospacer
   ..****..  ******************..***********************

31. spacer 2.2|509861|45|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.778

ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	CRISPR spacer
gtgttccggctggagacgctgaccggcggcatcggcaccgacgtg	Protospacer
 **  . *  * **.******.***********************

32. spacer 2.2|509861|45|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 10, identity: 0.778

ttgggtggtatcgaaacgctggccggcggcatcggcaccgacgtg	CRISPR spacer
gtgttccggctggagacgctgaccggcggcatcggcaccgacgtg	Protospacer
 **  . *  * **.******.***********************

33. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 10, identity: 0.851

gggtgagggggttgcgcttatgccggacgttccgccacgcgca-accccctcaccggccc	CRISPR spacer
gggtgagggggttgcgcttatgccggacgttccgccatgcgcaccccccctcaccggccc	Protospacer
*************************************.*****  ***************

34. spacer 3.3|634699|57|NZ_CP033314|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 12, identity: 0.789

ggcccgaagggccggtgaggggggtgcgcgtaacggtacgtccggcaaaagcgcaac	CRISPR spacer
gggagagggttagggtgaggggggtgcgcgtggcggtacgtccggcaaaagcgcaac	Protospacer
**   ...*    ******************..************************

35. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 14, identity: 0.791

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
gggtgagggggatgcgcttttgccggacgttccgccacgcgcaaccccctcaccctaacc	Protospacer
*********** ******* **********************************    *.

36. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 14, identity: 0.791

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
gggtgagggggatgcgcttttgccggacgttccgccacgcgcaaccccctcaccctaacc	Protospacer
*********** ******* **********************************    *.

37. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgagggggttgcgcttacgccgggcgttccgccacgcgcaaccccctcaccctaacc	Protospacer
 *******************.*****.***************************    *.

38. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgagggggttgcgcttttgccggacgttccgccacgcgcatccccctcaccctaacc	Protospacer
 ****************** *********************** **********    *.

39. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgaggggggtgcgcttatgccggacgttccgacacgcgcaaccccctcaccctaacc	Protospacer
 ********** ********************** *******************    *.

40. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgaggggggtgcgcttatgccggacgttccgacacgcgcaaccccctcaccctaacc	Protospacer
 ********** ********************** *******************    *.

41. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgagggggttgcgcttttgccggacgtaccgccacgcgcaaccccctcaccctaacc	Protospacer
 ****************** ********** ***********************    *.

42. spacer 3.2|634782|67|NZ_CP033314|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 15, identity: 0.776

gggtgagggggttgcgcttatgccggacgttccgccacgcgcaaccccctcaccggccct	CRISPR spacer
cggtgaggggggtgcgcttatgccggacgttccgacacgcgcaaccccctcaccctaacc	Protospacer
 ********** ********************** *******************    *.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage