CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031786	Lactobacillus paracasei strain 10266 plasmid pLP10266, complete sequence	0 crisprs	NA	0	0	3	0
NZ_CP031785	Lactobacillus paracasei strain 10266 chromosome, complete genome	3 crisprs	DinG,WYL,csa5gr11,DEDDh,csa3,csn2,cas2,cas1,cas9,cas3	0	16	7	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 14849

Staphylococcus_prophage(100.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172623761.1\|2662_3697_+	Stealth CR1 domain-containing protein	NA	NA	NA	NA
WP_149350359.1\|3835_4604_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_149350360.1\|5444_6632_+	hypothetical protein	NA	NA	NA	NA
WP_149350361.1\|8294_9833_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_149350362.1\|11837_12607_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003573774.1\|12882_13164_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_016363783.1\|13156_13399_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_003582572.1\|13525_13894_-	YxeA family protein	NA	NA	NA	NA
WP_149350363.1\|13928_14849_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-37	35.0

DBSCAN-SWA_2

18028 : 25150

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003582592.1\|18028_18910_+	AAA family ATPase	F0PIG8	Enterococcus_phage	5.0e-38	35.6
WP_003582590.1\|18902_19289_+	hypothetical protein	NA	NA	NA	NA
WP_002816607.1\|20198_20882_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.1e-60	51.8
WP_014571628.1\|20954_21173_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_149350367.1\|21184_21736_+	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_005691111.1\|21862_22066_+	hypothetical protein	NA	NA	NA	NA
WP_046811166.1\|22278_22548_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA
WP_005691113.1\|22565_22886_-	thioredoxin family protein	A0A1J0GW78	Streptomyces_phage	6.1e-10	36.3
WP_014571627.1\|23098_23437_+	PbsX family transcriptional regulator	NA	NA	NA	NA
WP_149350368.1\|24463_25150_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.6e-63	52.7

DBSCAN-SWA_3

30191 : 32227

Saudi_moumouvirus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149350372.1\|30191_30938_+	glycosyltransferase	A0A1S5V1S5	Saudi_moumouvirus	1.3e-07	34.3
WP_149350373.1\|31306_32227_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.4e-36	34.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP031785

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031785_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031785_1

753006-753138

Orphan

Consensus_repeat	Method
CGGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGCTTTGGTCGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031785_1

>merge|NZ_CP031785|1|753006-753138|CRISPRCasFinder
CGGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGCTTTGGTCGTGTAGGTTCGAAGCCCTTATGCTTCGGTTTCTGGGTCGGTTTGCGCGTTTCGGAGTTCAGCAATATCAGACAGGGCTTTGGTCGT

>NZ_CP031785|1|1|753006-753138|CRISPRCasFinder
CGGTTTGCGCGTTTCGGAGTTCAGCAATATCAGGCAGGGCTTTGGTCGT	GTAGGTTCGAAGCCCTTATGCTTCGGTTTCTGGGT
CGGTTTGCGCGTTTCGGAGTTCAGCAATATCAGACAGGGCTTTGGTCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031785.1\|WP_003569189.1\|755939_756725_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP031785.1\|WP_003569178.1\|748356_749478_+\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NZ_CP031785.1\|WP_003569192.1\|757649_758174_+\|DUF308-domain-containing-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003569173.1\|745452_745971_-\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506
NZ_CP031785.1\|WP_003569186.1\|754625_755729_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP031785.1\|WP_003569168.1\|742657_743338_-\|DUF4867-family-protein	unknown	unknown	gnl\|CDD\|379783
NZ_CP031785.1\|WP_011674244.1\|758407_759040_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
NZ_CP031785.1\|WP_003569171.1\|744412_745414_-\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
NZ_CP031785.1\|WP_003563745.1\|747669_748296_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|372595
NZ_CP031785.1\|WP_003587361.1\|749477_752603_+\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NZ_CP031785.1\|WP_003563776.1\|756727_757396_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376808
NZ_CP031785.1\|WP_003563792.1\|760106_761168_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003563743.1\|746448_747225_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP031785.1\|WP_003563790.1\|759111_759933_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP031785.1\|WP_003569175.1\|746015_746444_-\|galactose-6-phosphate-isomerase-subunit-LacA	unknown	unknown	gnl\|CDD\|181505
NZ_CP031785.1\|WP_003563777.1\|757392_757572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003573966.1\|753592_754069_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP031785.1\|WP_016363499.1\|754062_754296_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003563758.1\|752701_752845_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003569169.1\|743359_744298_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405

Protein	Function_ID	Function_description	E-value
NZ_CP031785.1\|WP_003569189.1\|755939_756725_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	2.12939e-22
NZ_CP031785.1\|WP_003569178.1\|748356_749478_+\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	7.75913e-49
NZ_CP031785.1\|WP_003569173.1\|745452_745971_-\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	1.64063e-103
NZ_CP031785.1\|WP_003569186.1\|754625_755729_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.81936e-124
NZ_CP031785.1\|WP_003569168.1\|742657_743338_-\|DUF4867-family-protein	gnl\|CDD\|379783	pfam16161, DUF4867, Domain of unknown function (DUF4867). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various human gut Firmicutes and a few eubacteria species. It is also amply represented in human gut metagenomic datasets. Distant homology analysis and marginal HMM overlaps suggest this family is a distant homolog of Ureidoglycolate hydrolase pfam04115, but this prediction is not verified by experiment, therefore the function of this family is still unknown.	2.20145e-88
NZ_CP031785.1\|WP_011674244.1\|758407_759040_+\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	3.18158e-11
NZ_CP031785.1\|WP_003569171.1\|744412_745414_-\|tagatose-bisphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
NZ_CP031785.1\|WP_003563745.1\|747669_748296_-\|HAD-IA-family-hydrolase	gnl\|CDD\|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	8.24385e-35
NZ_CP031785.1\|WP_003587361.1\|749477_752603_+\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	1.3057e-77
NZ_CP031785.1\|WP_003563776.1\|756727_757396_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	4.81778e-31
NZ_CP031785.1\|WP_003563743.1\|746448_747225_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.34504e-74
NZ_CP031785.1\|WP_003563790.1\|759111_759933_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	4.1808e-94
NZ_CP031785.1\|WP_003569175.1\|746015_746444_-\|galactose-6-phosphate-isomerase-subunit-LacA	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	1.46767e-74
NZ_CP031785.1\|WP_003573966.1\|753592_754069_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	8.90883e-46
NZ_CP031785.1\|WP_003569169.1\|743359_744298_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	8.80119e-143

>NZ_CP031785.1|WP_003563758.1|752701_752845_+|hypothetical-protein
MASLSKEQKKALIAKVEKERQDHPEKKSKKSGFETIDEEAERLESEN
>NZ_CP031785.1|WP_003587361.1|749477_752603_+|SMC-family-ATPase
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERDGGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSDEKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGTQLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVASQAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQLKQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAKSDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKTQQQTSLDNLGLDELINTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAETQVAATTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAALKQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKTGILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARIDAAEAQSALKTMQKNLPAEATDLATVAAQATTLQTTITTYQAQLQEAQARVNALDRQLAGLQADEKHAAAQVTALTKEQAEAKATFTIAVTQYFGADGKQRFAELQLRVSQLPLLNEQVQTYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAEKLAKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRLQVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVEPAGTGRSRLKILHSA
>NZ_CP031785.1|WP_003569178.1|748356_749478_+|exonuclease-SbcCD-subunit-D
MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIIIAGDLYDRALPSEAAVSVLDNMLIKLNRDHGYPLLVISGNHDSAVRLRTGRAWYAATKMFVNTQVAEAFTPIELDGVQFFLLPYFEPFAVRDYFQDKTITNVAQAIRPIVAKMKTLFKPDMRHILVSHFFAAGSDHSASETKVNVGGLDAVPLDDLAAFDYVALGHLHNHHALHGEPKIQYSGALLKYAVSEAHQEKGVYIVDTETMDREFVPLKPKHDLIELKASYADLTAPAYYQQQDRDAYIGIDLTDTQVIPNVMAQLRQIYPRIISLRRENGVNAVKPLQERQRDLDPMSLLQTFFKDMTQDDLSAAQIKWAKAGLTTAKKEQA
>NZ_CP031785.1|WP_003563745.1|747669_748296_-|HAD-IA-family-hydrolase
MNTFIFDIDGTLLDNVEAYLYGLQKTLRRHGREVPIHELTWTNGRAGVDSLAELGFSAAEIPEVHEQWREDSKEFLTDIAWFPGMQHALNQLKQTYKLGLVTSKDKTQFIEEDKKFHFSPYFDAIVVAGEAKRNKPFGDPITLARERLGSEPASTIYIGDTPTDAQAAADAKVAFALAGWTTPPSNEVMPRVAVLQQASDLLTLPTLA
>NZ_CP031785.1|WP_003563743.1|746448_747225_-|DeoR/GlpR-transcriptional-regulator
MLKDERLLTIRNLVDRKGIVTVNEIGESLGVSTMTVRRDLEELADQKELVRIHGGAQSTNFKPLTELSRNEKRSIHVNEKRKIAATIAALIIPGDTIYIGPGTTNEMIAQYLKKPDVRIITNSLPVFQSFQDRADFFSLQLIGGRLRARSGAFIGSLANEMLAHLTTTKAFISVNGIADNHISNASPEEGQTQRIALDNAGMKLVVADHFKLNRQDFYSFYDLDQTDGLITDPGISRDDLQHYNTFTHVITDKTNKGE
>NZ_CP031785.1|WP_003569175.1|746015_746444_-|galactose-6-phosphate-isomerase-subunit-LacA
MDVIIGADKDGFAMKEQVKKYLEDHQYRVKDMTPEPAEDFVDSSLAVTKELLSGDAHKAIMFDRYGMGSAMASNKVKGMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLDTEYAGGRHQIRLDMLEKMI
>NZ_CP031785.1|WP_003569173.1|745452_745971_-|galactose-6-phosphate-isomerase-subunit-LacB
MIIAIGNDHIVTMQKIEISNMLKDMGYTVIDEGTYDTHRTHYPIYGKKVAEDVADGRADLGIVMCGTGIGISTAADKNDGIRAAMCDDVTSAVYAREQLNANVLGIGGATVGIHMIQDIVKAYLDATYKETPQNKKIIDKIDNIAKPNPEQKDNPHFFDTELEKWAEGVYHD
>NZ_CP031785.1|WP_003569171.1|744412_745414_-|tagatose-bisphosphate-aldolase
MTVTLTAGQYKHLQQLSDDNNIISALAIDQRGSLKKMLAAAANKPADETTIVDFKKAVSEELTKYASSILLDPEYGLPAAKVRAPQAGLLLSYEKTGYDATEPGRFPDLIDDQSALRIKNEGGDAVKFLLYIDPDEPDAINDRKYAFVERVGAEAKANDLPLFLELVSYDGTLNETGTAAWAKVKPDKVIKITKEFSKPQYNVSVLKVEVPVDQKFVEGFTDEGVTPVYTKEEAAKYYKAQSDATDLPFIFLSAGVSNELFLEELKFAKQAGSTFNGVLCGRATWKPGVKPFAAEGEAAGKAWLQTEGKANIDRLNKVLAETATPWTDKVEHA
>NZ_CP031785.1|WP_003569169.1|743359_744298_-|tagatose-6-phosphate-kinase
MILTVTLNPSIDVSYPLEHLKIDTVNRVKTVRKTAGGKGLNVSRVIHMLNHEITATGFIGGYFGKWLENQLDRDGIDHDFFPIDAETRSSIAMLHDGGEQTEILEAGPTIAAEDAEKFLSHFDSLLDKSDLITISGSMPQGLPADYYTQMIAHAGQKNVKVLLDTSGATLKSALEAPVKPLLIKPNEEELGGLLNRDVDKTDYTALKHDLMDPIFDGVDWIVVSLGAAGAFVKHLDKFYHAAIPKIKVVNPVGSGDSTLAGLAMGIHDGKSDEDIMKTAMTTGMLNTMEAETGFVNPAKFDEYFAKVTIESY
>NZ_CP031785.1|WP_003569168.1|742657_743338_-|DUF4867-family-protein
MSTIDQLRTLNPDKTIHSLDEAAFADYGVTYAQYDVSELKTFMDQHVTIPAPSEANLYVPSNPDMEKIPVVQQIGRDVYAGLPIEAGECAGHAEALTAVEFHQGSEVNVFFTDVVMVIGKRGQMHDDQFNAEKDAKLFFVPAGTVVEFFSDTLHYSPCEAHASGFKFIVMLVRGSNQPLPADYHTDNKLIVKQNKFQVVHASRTDKIKQGIQVGVTGELVRVKHLN
>NZ_CP031785.1|WP_003573966.1|753592_754069_+|Hsp20/alpha-crystallin-family-protein
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
>NZ_CP031785.1|WP_016363499.1|754062_754296_-|hypothetical-protein
MFRFLTEPFRALQKNHPNDHTYRWDDFNDSMITATAAILIDFCLLTHGFCPLTAEVPLLFMLAMQSVNLGSTDDEHY
>NZ_CP031785.1|WP_003569186.1|754625_755729_+|A/G-specific-adenine-glycosylase
MTNKLMNWPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQFPTVGALAKAPEAEVLKAWEGLGYYSRARRLQQAAKQIVADYGGVWPQTSETLQTLSGIGPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRPGDFNQAVMDLGSSYMSANHPDPAHSPVRDFDASYRDGVVSAYPVKTKKPRPVLHRYFALVIRSEKGYLLEQRPSTGLLADLWMFPLVDMADLESTMMSAQLDEVSTLFAASSGMQLTFADLGAKTVKHTFTHQQWQLTLIGVETAASDLSFLPARWVKADHFSELALPTVQKKLNAALGMN
>NZ_CP031785.1|WP_003569189.1|755939_756725_+|alpha/beta-hydrolase
MTVNVTRDIAYGDAALQKLDFYEPEKSNGAAILDIHGGGWFRGEKNKEGEMAERFAALGYTVAVPNYRLAPEAFFPAARDDVLAAFSWLREHTKGLQLGVFGSSAGGSLSVDVGLAEGVPTVSWSGIFDIRQWFADHPAVVAQPDTKTDFVKTASAKIDQGGRNDPFYKWFILNYVDSDETKFPEVEPFDRLTAQAGPLYLANSQEEIIPISGIYQLAHAAEKLGLPVTLQSIPGGQHAEGYLDEAWQGTVAFFAQYLLKG
>NZ_CP031785.1|WP_003563776.1|756727_757396_+|NAD(P)H-dependent-oxidoreductase
METLVVVSHPEIEKSDTQQFLKASAASLSQVVWHHLDSRLPFDVTAEQQAITSADRLIFQFPLYWYMAPASLHQWLTDVWLKQFVYDARGGLLHGKSLGFVVTFSQPATAYQLGGSVGFSISQFLTPYAALAAKTGLTLLPPLTIAQFANQTDLEHQQLLVRYQQYLTLDHPDRPDEQAQWFIDRLSGNADTQLLADQLAAQTDDIDRLRLTLHELKAGESE
>NZ_CP031785.1|WP_003563777.1|757392_757572_+|hypothetical-protein
MTTDEQWLVNAAAVQEKQATSYENAAFFRALQAFVTQQAKRRESLEGEIDGRSWNHEQW
>NZ_CP031785.1|WP_003569192.1|757649_758174_+|DUF308-domain-containing-protein
MQTMFDRLQRWSWLRGLLMILIGAWILIAPRQVYRSFIWIVAAVLIIAAIPKLIDGFSARKASGTYGTSLFTGGFYLLLALMVPVIVRPLMSLGPLLLGIVLMIYGVNKILSARNRQQFVNVSVWPTVIYGVVLLIMGFIMALNPFRTVMMVFSFFGGLLVVMGILQLFTRPRA
>NZ_CP031785.1|WP_011674244.1|758407_759040_+|hypothetical-protein
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
>NZ_CP031785.1|WP_003563790.1|759111_759933_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MANEFPQVMTIGGTDSDGSAGVQADLHSFFMRGVYGATILTAAVAGNSYGIQDSMVMPLPFIDAQFKSLAADLHIRAAKTGMLADRALVQNIIKNWQQYDFGALVVDPVIITKHGAMLLEQDAYDAVKNELIPLATVVTPNHYEAEHLTGMKLDTDAQTEAAAHQLQDSGAKNIVLKGAHDDPTQPTVRDFVLLESGKSFWLSEPYHATDRVNGTGDTLSAVITAEIGKGNSVEEAIRIAKRFTNQAIGHPIAVGHQYGPINHWANKIVYPQF
>NZ_CP031785.1|WP_003563792.1|760106_761168_-|hypothetical-protein
MLNLNDAHLAALITKPLTVAQARQQIGTAYQQEADRLANSPLWESNDEALTALLASYTNLLGNKLYQALQNLTSIPTPFLQTLWLQDTTADAHHSEIAVIQTTQDDNNTLLTIVDPLSDDAKLKAVNLPTLLQITAADSNAMTYDAETVKALSALAKALNQGGYRFTTVDETVLQPVNGLSFKTRFDNLKPLVAKKAVIKAGDFSIGTSLDQDAKVLGYQVLDEDGHDWQDLGSEEVKNDRFEWASTTVPQELVNHRLKLIIRVSAGSNSPALDELFVIASNNAILMRQGAKAGVYELPLPNQKIFTVMINPANNMVYLKYPDPETQIIELNHQYPFIGEWLKAVLPQKRAFN

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Crispr_ID: NZ_CP031785_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031785_2

1947760-1947877

Orphan

Consensus_repeat	Method
GGTCCTTATGTGTAGGTTTCTGGGCCAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031785_2

>merge|NZ_CP031785|2|1947760-1947877|CRISPRCasFinder
GGTCCTTATGTGTAGGTTTCTGGGCCAGCAAACGCGTTTATGAGGAGCGTGAGCTGGACCGGGTAGAAACCGGAGCATAAAGTGGCCGCGGTCCTTATGTGTAGGTTTCTGGGCCAGC

>NZ_CP031785|2|2|1947760-1947877|CRISPRCasFinder
GGTCCTTATGTGTAGGTTTCTGGGCCAGC	AAACGCGTTTATGAGGAGCGTGAGCTGGACCGGGTAGAAACCGGAGCATAAAGTGGCCGC
GGTCCTTATGTGTAGGTTTCTGGGCCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031785.1\|WP_003566829.1\|1950780_1951155_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003566823.1\|1957418_1957586_-\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003579803.1\|1953804_1954941_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP031785.1\|WP_003566099.1\|1940112_1940814_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP031785.1\|WP_003566825.1\|1955049_1955367_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131249
NZ_CP031785.1\|WP_003584880.1\|1934753_1935911_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP031785.1\|WP_049145244.1\|1937006_1938200_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP031785.1\|WP_149350026.1\|1955536_1957204_-\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471
NZ_CP031785.1\|WP_003579810.1\|1959719_1960211_-\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830
NZ_CP031785.1\|WP_149350020.1\|1936176_1937004_-\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP031785.1\|WP_003579799.1\|1948036_1950355_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|213222
NZ_CP031785.1\|WP_003579780.1\|1940838_1941984_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP031785.1\|WP_003579793.1\|1942900_1944877_-\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP031785.1\|WP_003566828.1\|1951294_1951717_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_049146138.1\|1957621_1959733_-\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP031785.1\|WP_149350024.1\|1952279_1953710_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP031785.1\|WP_003566103.1\|1942090_1942888_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|223422
NZ_CP031785.1\|WP_003566087.1\|1938203_1939667_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_CP031785.1\|WP_003579795.1\|1945205_1946033_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|163441
NZ_CP031785.1\|WP_003579797.1\|1946094_1947561_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646

Protein	Function_ID	Function_description	E-value
NZ_CP031785.1\|WP_003579803.1\|1953804_1954941_+\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	1.10349e-71
NZ_CP031785.1\|WP_003566099.1\|1940112_1940814_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.02871e-84
NZ_CP031785.1\|WP_003566825.1\|1955049_1955367_-\|hypothetical-protein	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	6.08924e-12
NZ_CP031785.1\|WP_003584880.1\|1934753_1935911_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.08389e-45
NZ_CP031785.1\|WP_049145244.1\|1937006_1938200_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.77874e-42
NZ_CP031785.1\|WP_149350026.1\|1955536_1957204_-\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	6.41052e-06
NZ_CP031785.1\|WP_003579810.1\|1959719_1960211_-\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.38673e-15
NZ_CP031785.1\|WP_149350020.1\|1936176_1937004_-\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_CP031785.1\|WP_003579799.1\|1948036_1950355_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.12386e-103
NZ_CP031785.1\|WP_003579780.1\|1940838_1941984_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	5.10533e-157
NZ_CP031785.1\|WP_003579793.1\|1942900_1944877_-\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.36803e-97
NZ_CP031785.1\|WP_049146138.1\|1957621_1959733_-\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP031785.1\|WP_149350024.1\|1952279_1953710_+\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.52657e-43
NZ_CP031785.1\|WP_003566103.1\|1942090_1942888_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|223422	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism].	8.5867e-80
NZ_CP031785.1\|WP_003566087.1\|1938203_1939667_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP031785.1\|WP_003579795.1\|1945205_1946033_-\|metallophosphoesterase	gnl\|CDD\|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	7.77927e-119
NZ_CP031785.1\|WP_003579797.1\|1946094_1947561_-\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.05047e-153

>NZ_CP031785.1|WP_003579797.1|1946094_1947561_-|peptide-MFS-transporter
MNNSKDRTFMGHPRGLLTLSMTEFWERFSYYGMRAILIYYMYYAVEKGGLGFDQPTALSIMSIYGSLVYLSATIGGFISDRLLGSRRTVFWGGVLIMLGHIVLSLPIGATGLFGSIVLIVLGTGLLKPNVSEMVGSLYPEDDLRRDSGFSIFVMGINFGSLIAPIFVPWMADKVNFHAGFSLAAIGMFVGLIFYVIDGRKYINPADNTAPDPLKPEDVRPLVIRVVVAIAAVGVILLAMAGFNALTIANVISLITLIAIGLPIWYFVLMIRSKKVTKTERSRVIAYIPLFLAAMIFWAIEEQGSVVLALFAAQQTKLDFGFFKILPGNFQTLNPLFILLYGPLFAWLWMKLGKRQPTSPKKFYLGLIFAGASYLWMVIPVILFGSSAKVSPLWLVMSWAIVEIGEMLISPVGLSVTTKLAPKAYSSQMMSMWFLADASAQAVNAQIVRFYTPNHEVAYFAIVGLVSVGFAVVLAFFTPRIEKLMQGVN
>NZ_CP031785.1|WP_003579795.1|1945205_1946033_-|metallophosphoesterase
MVKIAFSVDNHFDVNRVDGFEMLKKQAAYLVEHDYQIYVNAGDTYNDFTKSLAYFRALQAEVGSAVTIRFLAGNHDMVNGATYDEIQSAVDPLYLHEKILPVPGTNAVIIGNNGWYDYSLGQLGNMKTDAEYAQWKRAFWIDSAIDAPVTDAARMQRVLTTTKAALQANQTHQMIYVTHFVPIREAMVYTVDRPPWQMATALMGSAKLGDLLTGKVSAVVFGHEHFRDAPKLLSGTTYYHQPLGYGLKRLFEWQSQDWWTEWRQTLVTLTVPTLS
>NZ_CP031785.1|WP_003579793.1|1942900_1944877_-|S9-family-peptidase
MAIKATDLFKLVSLSYPSATDDGYFVQENRISEADNTYYQRICFVNHRGGTIAYGFDQKHDRHPLLSPDQQWLAFLSQASDKTTQVFVQAVNGGTAKQFSAEKEGVSYFGWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKLNGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDFQQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGVVFTESTMTVPSRLSYFDLATEEEHVIYDPNRRVTRDMGLVTPQTFNFQRDGFEIEGWYFPPQQATASHPAILYVHGGPAVGYGYTFFHEMQFLAAQGYGVICPNPRGGLGYGEAFTAAVIKHYGQGDYEDCMASVDEALKLDTTIDPDRLYVAGGSYGGFMTNWIVTHTHRFKAAVTQRSIANWLSMYGTSDIGYFFTPWELEGKWTGDLSDVKSLWDFSPLAHIDFAQTPTLVMHSENDQRCPIGQGEEFYIGLKLHGVDTKFMRFPNATHELSRSGLPNLRLARLAALVDWFKTHSATEESHQA
>NZ_CP031785.1|WP_003566103.1|1942090_1942888_-|pyrroline-5-carboxylate-reductase
MTIGFIGAGNMARAIITGLLAKNAVTPEEIVLHGGQPIHYEPYAAKIGAKAVASNQAVADTADIVFLAVAPKLGVPILKTIGPTLKQRQVPIVSMLTGVSLATLEDALGSQDQPVLRIMPNVNVAINAGMTAYAANDSVAGQLDGLLDLLNVLGKTMALPEDQFSTFVALAGSSPAFVYLFIDSLSRAGVKYGLTKKQATAIAAQAVMGSAQNVLASEQSPFDLIDQVSSPGGTTVAGLLAMEQAGLMSAVIKGVDATIAKDRQG
>NZ_CP031785.1|WP_003579780.1|1940838_1941984_-|N-acetylglucosamine-6-phosphate-deacetylase
MTVTVLKHATIYTGLERIDDGYVRFDDKILAVGDMFDYRAQSGEQTFDLQGKTLIPGFIDVHAHGGYGFDAMDGDADQIDEMATKMMTHEGVTTLFATTMTQSTENIDKAMRGVKQAAERNHIIQGVHLEGPFISKVFKGAQPEEYIKNPNVDLVKQWQELSGDLVKLITYAPEDEGSQAFEDYLLAHNIVPSVGHSNATREQMLHSKATHVTHLYNAQRGLRHREPGVTGHAMLEDNMYCELICDGFHIVPDMLRLAFDQKGPERIELVTDSMRSKGMPEGKSELGGQTVYVKDKQARLKDGTLAGSVLMYKDAFKNAMSFMDASLFDAVEMSSVNQAREFNLTSKGTLEVGKDADINVLDRNNDLVATYSYGVKHDTED
>NZ_CP031785.1|WP_003566099.1|1940112_1940814_-|GntR-family-transcriptional-regulator
MDAPVYIQIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVGSGTYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLEPKEQVLRMERIRYADKIPISFETAAVPYNLVKNFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLASERISEYLDIKRGEAILRLRQVSFLQDGTPFEYVRTQYVGERFEFYLER
>NZ_CP031785.1|WP_003566087.1|1938203_1939667_-|nicotinate-phosphoribosyltransferase
MTTQLGEGLTLHTDFYELNMMNTFFEQGISERNAVFEVFFRDLPFGSGFAVFAGLEHVMDYLNHLKFSEDDLAYLQSQTDYSDAFIDYLRHLKFTCTVKSALEGDLVFNNEPIWQIEGPLAQAQLVETAVLNMINYQTLVATKAARIRSVAGADPLMEFGTRRAQETAAALWGTRAAYIGGFNATSNVLAGKEFGIPISGTHAHSLVQAYGNDYDAFKAYARSNKDVVFLVDTYDTLRSGVPAAIKVANEFKGKINFLGVRIDSGDMAFISKRVRQQLDDAGYESAKIYASNDLDENTIQNLKMQGAKIDIWGVGTRLITAYDQPALGAVFKLVSIEDAAGKMRDTIKLSNNAEKVSTPGKKQVWRITRQDDGKSEGDYVALADETIDTQRSLYMFHPNFPYINKTVKNFEAKPLLQTIYDKGQQVYHTPPLQEVQAYATRSTNALWDEYRRILNPQDYPVDLSQRVWDNKMDLIKAVKSAVADREE
>NZ_CP031785.1|WP_049145244.1|1937006_1938200_-|serine-hydrolase
MRASKRRSQYRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYETELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPKTLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGSYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV
>NZ_CP031785.1|WP_149350020.1|1936176_1937004_-|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHAVVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK
>NZ_CP031785.1|WP_003584880.1|1934753_1935911_-|serine-hydrolase
MSGKHRYIWLGVMLILCAVSIGAGTYLWQQNSRSAVNTKVKSAKTVTKAVRRDRGKSKEELLAMTLDRVATTTEGQPLEQELTNDKFIGSALIIKHGKVVFNNGVGDADTTTHRRNGPTTLFQIGSIQKAVTAVALAQLAASGKLSLDDPVGKYLTGIKTGDQVTLRMMVAMRSGFSLRKYQPTVMDDANIIQWSIANLTYLPQDNYAYQAVNYVLLAGVIEKVAGRSYEQQVKNNIFDRLNLKHTGFLPAMLTDPERAITYTGPAANPYQTAIGEPAVWYNRELGTGNVYTSTGDLYRLLRGIDTGKVLPLSTLKTLRNRNDGVYNAGIYNHADFYSTNGVVAGQMASTAISHDGQNAVILLSNYNSHALNLHDLAVHLFSELG
>NZ_CP031785.1|WP_003579799.1|1948036_1950355_-|ABC-transporter-ATP-binding-protein/permease
MLDLKHIKKYYQTGDYTTKALDDVSVQFREQEFVAILGPSGSGKTTLLNVIGGLDRYDSGDLLLHGRSTKNFKEADWDAYRNNSVGFIFQSYNLIMHLSILENVELGLTLSGVSAADRRKKAEAALTKVGLKAHMGKQPNQLSGGQMQRVAIARAIVSEPSILLADEPTGALDTETSEEIMRLIADLSRERLVIMVTHNPQLAHEYAERTIEFKDGKILSDSRPFKDEEKTASFDLHRTKMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIAVVLALSSGFQKQIDNTQAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYIDYVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKSVQFSTAKPSSNQTQRGLASASSSVYPVDREGGTSYLKKNYEVVAGSYPKHDGDVILIVDRDNSTNINALKNLGFDVKDGQKVKFNQIVGTKIKAISNNAYYQNVAGNVYVPTKDYANAYKQNDNRELTVAGVLRTRSKTSDGLLSQGFAYSDRLTKDLVALNKDSDVVKAQRASDVNIFTNQSVDKATKDQLITALGGSETPTQITIYPTSFKDKDKILSYLDKFNHGKKKADQVVYTDLAGTISSMTGGIMSAITIVLVAFAGISLVTSMIMIAILTYTSVLERTKEIGVLKALGARRKDITRVFDAETIILGVSSGILGIIIAWLLTFPINAILYSMTELPNVAQLNPIHAVILILISTILTVLGGHIPARMAANKDAAIALRAD
>NZ_CP031785.1|WP_003566829.1|1950780_1951155_-|hypothetical-protein
MAVWRMMFARPQFKHRQIKRMVDDLNREGNFGGMPIHRITLTRQTRELIYVDLEFQLTTGLTQPLFEQMAKYILVAVAGLAHAPQPIYLAAMANPFAKLNISYYIYPDHSLDLIYWQPLLREPT
>NZ_CP031785.1|WP_003566828.1|1951294_1951717_-|hypothetical-protein
MHTRCQEPNYVEVVNQNLERLLVFETVFKEYVHTCKNIEKGNCYASESLDHLRLYFTKNVMKFCTFVDSVDAEAAPCNYAAFHKVLVNGLRGIRGGVLNMLQAIGTDKVDHDRFAAGLAEQQAARAEIDTAFSKILDPIF
>NZ_CP031785.1|WP_149350024.1|1952279_1953710_+|MFS-transporter
MKGYPKQYPLDRQTLFGINTMGLMSTTAYYLYTAVLMMFITDYSGIYSGVPGKAAAVATTLLFVGRLWDAVNDFWTGYLIDISPRTRWGKFKPYVLIGSLLAGILGMMLFHIPQNFSNFGKEVYLYIVYFLFMFAATIIVTVPLTSTMSADQEVRAKLISWPRITSNIVGVVFAFFMAIATYLGTKRNPNIPLTVDLIVIPFLILSLIGIVMVKEGPVTEEAKPPRLRDIGQMIKINHPFRINLYFTFVGGFVWALLTATSLYYIKYAFGVKNLGTQSMYFGLLTLITLVAGTLISQKAMQYISAIRGVQWCYLAMAPFLVIMFIINEIHVIDNPWVFYLLIGIVMTIAGAQFVPANLIIMETMDYNRLKLNAGMEATINAVNMFLQKLQSGLATIGVGAALLIVGYNAQTLEKASHVPDNLLQSLGVVLFAIPAVFSFLAYLIARHYPLQGAARDEMYAALAAKRVTNTQSSKSK
>NZ_CP031785.1|WP_003579803.1|1953804_1954941_+|alpha-L-fucosidase
MTKPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAEAFANAGAKYVVIVTKHHDGFVMFDPHTKNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWRQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYYYQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELGSKRGRLLLNVGPDMNGQIPSAQLSILQQLSDR
>NZ_CP031785.1|WP_003566825.1|1955049_1955367_-|hypothetical-protein
MAIHFVIYEKPNCESCRLTKRWLAEHGQHFRTTNHRGESNLVDINANDPLKRAWSHQKIVKFREAGYDRFPVVRVRDDATGDVLATWSGFRPEALASWTAINQLG
>NZ_CP031785.1|WP_149350026.1|1955536_1957204_-|phosphoenolpyruvate-carboxykinase-(ATP)
MTSKQSFSSSDITSQSGYFSALKATVETAFYGENVKQVTTIAQAYALAKTAPGVIITDLPIKHTAELGLPPDAKVLVANDGRVVGRTAAARQIIGQPDVDETKLAAIAREAVFLGSRKTFLRGDVTVGLSSDFAIKAHLMLPEAYANNLYTYLLNFQIDTPQRNAEYEQSRPLPEDDIYLYADPDWHDPAYPNGVAVFDPTHNAAIVLGLRYFGELKKGTLTLAWATAHRNGFVACHGGMKQYTRQDGDFTMAAFGLSGSGKSTITLASHGDQYPVKVLHDDAFVIDRQTGATTALEPSYFDKTQDYPLSDPGIQYFLTVQNVGVTLDAAGKKTLVTQDIRNGNGRTVKSRYVTPNRVDHLTESIDAIFWIMKDDTLPPVVKLEDPDLAAAFGVTLATKRSTAENVIGDVDRDHLVIEPFANPFRSYPLGEDYQDFQQLFEQRQTACYILNTGSYNGQNVKPADTLGAIAKIVDETAAFKPFGLLPKMRYLPLSGFNVDFGDNDYRARLRQRLEDRLAFIATKDVDHDGYDRLPIDASRALEDVIAALDQQAAAM
>NZ_CP031785.1|WP_003566823.1|1957418_1957586_-|FeoB-associated-Cys-rich-membrane-protein
MATWIIGGIVVLIIAVVAYRTFFKKNKAGCSQCEEVGCPLIDHAKMVQANNRRKA
>NZ_CP031785.1|WP_049146138.1|1957621_1959733_-|ferrous-iron-transport-protein-B
MAIRETLALVGNPNSGKTTLFNALTGAKQHIGNWLGVTVERKSGRLKADNALVIQDLPGTYSLSPYSSEEIVTRDFLLNDQPDLVLNVVDATNLERNLYLTLQVMETGRPLIVALNMMDVLVKTGHRTINLKKLSYALQVPVIATTATKPAALQELVQTIQAPLPKPYAFPEYDARLESALTMLEDVIDQKVPADRLRWYAIKVFEKDPQVVKQLAFSSDEQHQMNEILRTAEHVFDDTTDSIIVNARYDFIARVIAMCVVDKDDFVMSMSDKIDRIVTDRYLALPIFVLVMWAVYYLSIQTIGTIGSDYLNDTVFGGWLPSVVGGTLKSWAVAPWLSGLIVDGLIGGIGSVLGFLPQIMMLFLCLGILEDCGYMARIAFVMDRLFHRFNLSGKSFIPILIATGCGVPGIMATRTIESEKDRRMSIMLTTFMPCSAKLTVIALVSGTFFPSTSWVAPSAYFMGIIAVICSGIFLKKTALFAGPPAPFVMELPAYHLPRLTNLYRSVMSRARAFVQKAGTIIFLSCVLLWFLSNFNFGLQMVDENDSMLRGLGTVIAPVFAPLGFGDWHATVATLAGLIAKENCVGTLHISFGAGSASGFGQALRATYPAMAGYAFLVFNLLCAPCFAAIGTMYKEFGDARWTWRAVGYQTGVAYLLTMLIYQGSLVVSGQASVMSIGLVLVAILVIVYGLLIKRPVPAIASSY
>NZ_CP031785.1|WP_003579810.1|1959719_1960211_-|ferrous-iron-transport-protein-A
MQALIDVRESGAYLLMSVGGSGALRRHLAEMGLVVGKKVTVVQPASKLSGMVIFFQGQRLAISDEIASLLVVRPFAMDADTPAIALADLPLRQAGLIRTIKGDPPLRHRLMDMGLTKGTLVKIHQIAPLGDPIELAVRGYKLSIRKQDAAHVLVTEVTSDGDT

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Crispr_ID: NZ_CP031785_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031785_3

2298816-2300897

TypeII

Consensus_repeat	Method
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CRISPRCasFinder
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CRT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	PILER-CR

31 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP031785_3

>merge|NZ_CP031785|3|2298816-2300897|CRISPRCasFinder,CRT,PILER-CR
GGAATTCAACTGATTGATTCGGCATCTACCTGAGAGCATCAATTGCGGGAAGAACTCGAATTTCCTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCGAAAGTAGTTGATCGTCCGACCTTCTCGGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACACAAACATCTGCGCAACGAGGAAACTGGGTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCCGGATTCAATCGCCTGAACGTAAGCCTTTGCTTTTGAACTGATTGATTCGACATCTACCTGAGACAGTTGTCAGGATTAAGTGGCGCTAACCCTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCCTTGCGCACGGTATAACCGTTGACGTAAGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCAGAAATGCAACGTTCACAACGTCAATATGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGATTGACTCCAAGACGAATGATGGTTTTACGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGACGCCTCCAGTATTCACAGCCAAGGTTAGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCTGACTAACATCAAAGATTTGCTCACCTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTAATCTTGATTATGATGCGAGTTATATTGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACAAACGCTATTGCCACACAAGACCTTGAAGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACATAACCGGTGTAAACAGTTCTTCATAAAAGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCCGGCGTTAGCTTTTGTGAGGGTACGATGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACACCAAGATACAACTAACAATCAGAACTCAAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCGCGCGAGCACCCAGTTGGCAGCACCGTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTGACGTTGAAACCCGTGTCACAATTGTCGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTACGGTAATGCGGAAAATTCGCGGCGACGTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGCGGCTATAGCTTCCACCGCTTCAATTGTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACATTCACCCAATTTAACGGGGTCTATCTTGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACCTAATTTTGATATATCAAAGCGAACGCTTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGGACGTCAGCAATGAATCGCTGCCACCAACGCTCTTGAACTGATTGATTCGACATCTACCTGAGACAAAAATGACAAGTTAGCGCTACGCCACGCTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACACGGCTTCGCTCTTATGGATGATAATTTAGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTGGGGCTTGTGGGTGTACCCAACTGAATGTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTGTACCTAGCATTAATAATATTGCGCCAAAGCTCTTGAACTGATTGATTCGACATCTACCTGAGACAAATAAGCCGTGCCTTCCCCACTCTTAGGCGCTCTTGAACTGATTGATTCGACATCTACCTGAGACACCTGATGGTCAAAGGTTGTCGTATCCGTTGCTCTTGAACTGATTGATTCGACATCTACCTGAGACAATCCAGATTTAGAATTGCTTTTTAAACATGCTCTTGAACTGATTGATTCGACATCTACCTGAGACGAAATTCATTATTGGCAGTATATATGGCTGGCTCTTGAACTGATTGATTCGACATCTACCTGAGACTTGCTATCTGGCTTAAATGTTACATTGCGAGCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NZ_CP031785|3|3|2298816-2300897|CRISPRCasFinder
GGAATTCAACTGATTGATTCGGCATCTACCTGAGAG	CATCAATTGCGGGAAGAACTCGAATTTCCT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAAAGTAGTTGATCGTCCGACCTTCTCGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACAAACATCTGCGCAACGAGGAAACTGGGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCGGATTCAATCGCCTGAACGTAAGCCTTT
GCTTTTGAACTGATTGATTCGACATCTACCTGAGAC	AGTTGTCAGGATTAAGTGGCGCTAACCCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCTTGCGCACGGTATAACCGTTGACGTAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CAGAAATGCAACGTTCACAACGTCAATATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GATTGACTCCAAGACGAATGATGGTTTTAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GACGCCTCCAGTATTCACAGCCAAGGTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCTGACTAACATCAAAGATTTGCTCACCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TAATCTTGATTATGATGCGAGTTATATTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAACGCTATTGCCACACAAGACCTTGAAGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATAACCGGTGTAAACAGTTCTTCATAAAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCGGCGTTAGCTTTTGTGAGGGTACGATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCAAGATACAACTAACAATCAGAACTCAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGCGAGCACCCAGTTGGCAGCACCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGACGTTGAAACCCGTGTCACAATTGTCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TACGGTAATGCGGAAAATTCGCGGCGACGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGGCTATAGCTTCCACCGCTTCAATTGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATTCACCCAATTTAACGGGGTCTATCTTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CTAATTTTGATATATCAAAGCGAACGCTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GGACGTCAGCAATGAATCGCTGCCACCAAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAAAATGACAAGTTAGCGCTACGCCACGCT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACGGCTTCGCTCTTATGGATGATAATTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGGGGCTTGTGGGTGTACCCAACTGAATGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTACCTAGCATTAATAATATTGCGCCAAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAATAAGCCGTGCCTTCCCCACTCTTAGGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCTGATGGTCAAAGGTTGTCGTATCCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AATCCAGATTTAGAATTGCTTTTTAAACAT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATTCATTATTGGCAGTATATATGGCTG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCTATCTGGCTTAAATGTTACATTGCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NZ_CP031785|3|1|2298816-2300897|CRT
GGAATTCAACTGATTGATTCGGCATCTACCTGAGAG	CATCAATTGCGGGAAGAACTCGAATTTCCT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAAAGTAGTTGATCGTCCGACCTTCTCGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACAAACATCTGCGCAACGAGGAAACTGGGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCGGATTCAATCGCCTGAACGTAAGCCTTT
GCTTTTGAACTGATTGATTCGACATCTACCTGAGAC	AGTTGTCAGGATTAAGTGGCGCTAACCCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCTTGCGCACGGTATAACCGTTGACGTAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CAGAAATGCAACGTTCACAACGTCAATATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GATTGACTCCAAGACGAATGATGGTTTTAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GACGCCTCCAGTATTCACAGCCAAGGTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCTGACTAACATCAAAGATTTGCTCACCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TAATCTTGATTATGATGCGAGTTATATTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAACGCTATTGCCACACAAGACCTTGAAGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATAACCGGTGTAAACAGTTCTTCATAAAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCGGCGTTAGCTTTTGTGAGGGTACGATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCAAGATACAACTAACAATCAGAACTCAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGCGAGCACCCAGTTGGCAGCACCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGACGTTGAAACCCGTGTCACAATTGTCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TACGGTAATGCGGAAAATTCGCGGCGACGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGGCTATAGCTTCCACCGCTTCAATTGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATTCACCCAATTTAACGGGGTCTATCTTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CTAATTTTGATATATCAAAGCGAACGCTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GGACGTCAGCAATGAATCGCTGCCACCAAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAAAATGACAAGTTAGCGCTACGCCACGCT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACGGCTTCGCTCTTATGGATGATAATTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGGGGCTTGTGGGTGTACCCAACTGAATGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTACCTAGCATTAATAATATTGCGCCAAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAATAAGCCGTGCCTTCCCCACTCTTAGGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCTGATGGTCAAAGGTTGTCGTATCCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AATCCAGATTTAGAATTGCTTTTTAAACAT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATTCATTATTGGCAGTATATATGGCTG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCTATCTGGCTTAAATGTTACATTGCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

>NZ_CP031785|3|1|2298882-2300897|PILER-CR
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CGAAAGTAGTTGATCGTCCGACCTTCTCGG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACAAACATCTGCGCAACGAGGAAACTGGGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCGGATTCAATCGCCTGAACGTAAGCCTTT
GCTTTTGAACTGATTGATTCGACATCTACCTGAGAC	AGTTGTCAGGATTAAGTGGCGCTAACCCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CCTTGCGCACGGTATAACCGTTGACGTAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CAGAAATGCAACGTTCACAACGTCAATATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GATTGACTCCAAGACGAATGATGGTTTTAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GACGCCTCCAGTATTCACAGCCAAGGTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCTGACTAACATCAAAGATTTGCTCACCTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TAATCTTGATTATGATGCGAGTTATATTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAACGCTATTGCCACACAAGACCTTGAAGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATAACCGGTGTAAACAGTTCTTCATAAAAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCCGGCGTTAGCTTTTGTGAGGGTACGATG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCAAGATACAACTAACAATCAGAACTCAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGCGCGAGCACCCAGTTGGCAGCACCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGACGTTGAAACCCGTGTCACAATTGTCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TACGGTAATGCGGAAAATTCGCGGCGACGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GCGGCTATAGCTTCCACCGCTTCAATTGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ATTCACCCAATTTAACGGGGTCTATCTTGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	CTAATTTTGATATATCAAAGCGAACGCTTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GGACGTCAGCAATGAATCGCTGCCACCAAC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAAAATGACAAGTTAGCGCTACGCCACGCT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACGGCTTCGCTCTTATGGATGATAATTTAG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGGGGCTTGTGGGTGTACCCAACTGAATGT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TGTACCTAGCATTAATAATATTGCGCCAAA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AAATAAGCCGTGCCTTCCCCACTCTTAGGC
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	ACCTGATGGTCAAAGGTTGTCGTATCCGTT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	AATCCAGATTTAGAATTGCTTTTTAAACAT
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	GAAATTCATTATTGGCAGTATATATGGCTG
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC	TTGCTATCTGGCTTAAATGTTACATTGCGA
GCTCTTGAACTGATTGATTCGACATCTACCTGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031785.1\|WP_003586316.1\|2300921_2301599_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP031785.1\|WP_003566944.1\|2309837_2310161_+\|DUF4870-domain-containing-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003571221.1\|2308004_2309171_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_149350203.1\|2286035_2287454_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP031785.1\|WP_003584829.1\|2310232_2311960_-\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP031785.1\|WP_003586314.1\|2301595_2301901_-\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP031785.1\|WP_003566934.1\|2297434_2298535_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_003580474.1\|2287744_2288311_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP031785.1\|WP_003586311.1\|2301878_2302784_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP031785.1\|WP_149350212.1\|2307209_2308004_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031785.1\|WP_149350210.1\|2296857_2297283_-\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|227646
NZ_CP031785.1\|WP_149350205.1\|2293341_2294973_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP031785.1\|WP_019894961.1\|2302978_2307061_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP031785.1\|WP_003566940.1\|2309394_2309769_+\|YxeA-family-protein	unknown	unknown	gnl\|CDD\|377665
NZ_CP031785.1\|WP_003580477.1\|2290056_2291895_-\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|273919
NZ_CP031785.1\|WP_003580476.1\|2288437_2289886_-\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|236580
NZ_CP031785.1\|WP_003580480.1\|2292346_2293204_-\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP031785.1\|WP_149350207.1\|2294969_2296661_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NZ_CP031785.1\|WP_003571227.1\|2311940_2313683_-\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
NZ_CP031785.1\|WP_003580470.1\|2284498_2285830_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224169

Protein	Function_ID	Function_description	E-value
NZ_CP031785.1\|WP_003586316.1\|2300921_2301599_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.15445e-80
NZ_CP031785.1\|WP_149350203.1\|2286035_2287454_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	6.53668e-65
NZ_CP031785.1\|WP_003580474.1\|2287744_2288311_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.1683e-11
NZ_CP031785.1\|WP_003586314.1\|2301595_2301901_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.69699e-23
NZ_CP031785.1\|WP_003586311.1\|2301878_2302784_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	8.31092e-89
NZ_CP031785.1\|WP_003584829.1\|2310232_2311960_-\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	4.4558e-158
NZ_CP031785.1\|WP_149350210.1\|2296857_2297283_-\|NusG-domain-II-containing-protein	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	6.19392e-34
NZ_CP031785.1\|WP_149350205.1\|2293341_2294973_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.01887e-91
NZ_CP031785.1\|WP_019894961.1\|2302978_2307061_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	5.90136e-117
NZ_CP031785.1\|WP_003566940.1\|2309394_2309769_+\|YxeA-family-protein	gnl\|CDD\|377665	pfam06486, DUF1093, Protein of unknown function (DUF1093). This family consists of several hypothetical bacterial proteins of unknown function.	3.24145e-19
NZ_CP031785.1\|WP_003580477.1\|2290056_2291895_-\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP031785.1\|WP_003580476.1\|2288437_2289886_-\|family-1-glycosylhydrolase	gnl\|CDD\|236580	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP031785.1\|WP_003580480.1\|2292346_2293204_-\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	1.02475e-34
NZ_CP031785.1\|WP_149350207.1\|2294969_2296661_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	7.29369e-92
NZ_CP031785.1\|WP_003571227.1\|2311940_2313683_-\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP031785.1\|WP_003580470.1\|2284498_2285830_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224169	COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion].	2.26205e-107

>NZ_CP031785.1|WP_003566934.1|2297434_2298535_-|hypothetical-protein
MKKLIVLSATLLVSMGLAACSSGSSSSSSKSSSTTSQTSNAKVKINTGADASAKVPAAGTLVMRQLYAAPHGKQSFAAVNVTLNGDTIVSAKIDEFQYVKKSSDWTGVPNSNKDFGKSYPKGQFLIAKAENSKPYSALMKKEAKATHTWEENETAITNFVKGKKIEDLKADVAKVKDTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDNTITEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPSKDFGGVPNSNADFGKGIKSGTVLASKRANSEAYSAIMKSKGKATQTWQENSNAIDEFAKGKTIAELETAVSDLKGKKKVSDVVSGATFTDTSGYLTAIISAAKAAK
>NZ_CP031785.1|WP_149350210.1|2296857_2297283_-|NusG-domain-II-containing-protein
MRWLKKYVRPFDYVIIIVLFVACFLPVGIFSLTEANVNTNQKVAVISINGHVKRRIQLTTHTRHQQFTLYPAKRQYNIIEVQGARIRDKEDNSPDQIAVHTGWISQIGQQSICLPHKLLIEIKPAQAGTGTSGDTGGLVHP
>NZ_CP031785.1|WP_149350207.1|2294969_2296661_-|ATP-binding-cassette-domain-containing-protein
MLGLLKYGRDQCWAGVIETVFDWLPTLLPIMIALNFAAKRPGNALIITVILVLIWLGYVIGYERHHRHAWAMSAKRELRDHYFEALYQRNNAGDATAADNAVIQRDLGGLNNLDMFYSTLFPTLIQAGLTFLLLIGLSVWYGSWLAFLPLACVFLIGFAMMFLGKKMSAQNKAHLAGFLRMGGRFMNDLSGMNTLVMYNAADRYAKKFADDSEYFRQATMNLLRTQLQVLFVINGFVYLTVFAGGFVTALQLAAGQLPAAGAFATWFALAMMMVNARQLGYFFHVVKSNGPALAGILATIAKSKTTPATVKITDNRPLKQLVLQDVAIGYEADAPLVSDINATLVPGMLYGLAGENGTGKSTLTQALLGQLTPLSGTIMADNTPVTALSNAQRAAVFGYVAANDYIFSGTIKENLLLGNQFGDQWQQHLDELGLMHFVTDLQDGYATEVGEGGRLLSPGQRQQLAFARMLLADKTVYLLDEMTSSIDAANAAIILAAIKRLSRQKIVLFISHDLLAMAEADVVWFIHDHQLISADHAQLYRDQPAYRHLVDNPEAMLKEGQPS
>NZ_CP031785.1|WP_149350205.1|2293341_2294973_-|ATP-binding-cassette-domain-containing-protein
MIRSLLRYTHHLTGAIIISFLIGLVAELTKVVVLVLAAMMLFDPQNASHLLIPGIIAVVIVGLGSFGEQYAGHFVAFHVLAELRGAVYRKLVQLAPAKLDSQGSGKLLKLIGSDIEAMEIFYAHTIVPVAIGLIYGVLMVAVYSSLNGPAAAVVLVSYAAVGLLIPYYRHEQMTAKAQAADRQKAVNQQYLLESVRGMAVLRQLEVADARMKTGNEGFDHEATAFQQSQFGQLLKNMSATLVMLVAWLFIVWLSGWTQPQPLQQALLAVFPLTFGPLLALTNLPASLLNGFAAARNLLNLLQEVPATSAAIDATRTLNQIAIIQVDHVTFKYPSRDETVLRQVSLSLHAGEIVGFVGASGSGKSTLAKLIMGWYPLTQGRILIDGIDLTKIDPASLRAQVNYLPQTPVFFSESVRDNLTLHDATITDAQIWTVLNQVKLTSRLRQAEKGLDENVVSGQLQFSSGEQQRLELARALLQPSSVLVLDEPTSNLDTENERLILDAIKAYYHGIVIMISHRAESAAYADRLYRFADHQVSAASTEPK
>NZ_CP031785.1|WP_003580480.1|2292346_2293204_-|PRD-domain-containing-protein
MIIQNVLNNNAVVARHQQREVIVVERGIGFRAKKDAKMALRDSMKVYVPEDQAKLKIATATIASLPSAYLDLAAGIIQEAEKRLQTTFKSYLLIELADHVHFAVQRLYEKIVLHNKLLWEIQVAYTQEYEMGEWALHQIAAQLHEQLPEDEAGFIALKFVSNDLNHQQTVNSLAFTQTLASLTKIIFYNLGLDMNVKTPDYQRLVIHLKFFLQRMYAAAPSPLSLKMENYDYVLLKHLQQDYARAYHCMEDVDRFMQQKLAIAIPKNEQIYLTMHIARLAKSLAE
>NZ_CP031785.1|WP_003580477.1|2290056_2291895_-|PTS-glucose-transporter-subunit-IIA
MNESGLAQQLLNLIGGKQNINQVWHCATRLRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVIGNNVGDVYHEVVKLEPSLSEGETSGETAAQGKMTFKSAFNSLLTFISGVFTPFLGAMAGAGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAIAAAMVSPGIVALGAKATTIDFFGIPVVPANYTATVLPILLVVVVQKFLEPVFNKLWHESVRNILAPVCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSVPILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFLRTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGANAAALASVLSLPTFIGKGFGLSVVGDVVAFALGTVLTYFFGGINAGAKAKTSPSANSELGEALAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGMVKAPVAGVIRLLYPTGHAIGIQSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGTPLVQFDHEAIEKEGYESTVMMIVTNSDQYQIATLGQGATDDRPVMTLA
>NZ_CP031785.1|WP_003580476.1|2288437_2289886_-|family-1-glycosylhydrolase
MTYLNFPKNFLWGGATAANQLEGAYQEDGKGLSIADVLPQGKDRFTIVNRPDFNWTIDKSKYRYPNHQGIDHYHRFKEDIKLFSEMGFKCYRFSIAWSRIFPEGDEKTPNASGLKFYDEVIATCLKYDIEPVVTISHYEMPLHLVTKYGGWKNKRLIEFYKHFAETVLTRYFKQVKYWMTFNEINSAWAFPVMSQGLVANNGGNDKQTIFQAWHNQFVASAWAVKIGHALDPKLQVGCMLLYATTYSYDANPVNQLATLQQNQAFNFFCGDVQVRGEYPAYTDALMADNGFKFTDLDFSAEELTLLKNHPVDYIGFSYYMSAVVETVEKEHAEVGGNLLSGIKNPFLRASEWGWQIDPIGLRIALNQLYERYRKPLFIVENGLGAVDKPDADGKIKDDYRIDYLKQHIEQMGAAIHDGVDLMGYTPWGCIDLVSASSGQMSKRYGFIYVDLDDAGQGSLNRYKKQSFNWYQRVIASNGTDLG
>NZ_CP031785.1|WP_003580474.1|2287744_2288311_-|TetR/AcrR-family-transcriptional-regulator
MDTREKLVATAASLFQKEGVRATGLTQILTVSGTPKGSLYYYFPNGKAQLIEAAITYAGQHILEHVQRDLDRYKAPDAALAGQLESMATEMQEKGHLGGNSISLIALETGDDPELQAACSAVFTQLETLYIKKLTSAGIPPDRAQPLGQFIQASIEGAIILAATKDNPDLLRQTADQLTRLIKLALAA
>NZ_CP031785.1|WP_149350203.1|2286035_2287454_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MQLSQTKEMPQARVHVAHPAMAMIGLMIGAFVGMFSETSLNIALPSLMTALNVSQGTIQWLVTGYMLVIGICMPLSSLLSKWYNTKKIILFALGAFILGSVVSAMGAVFPVVLIGRLIQGIGTGLILPLMFSVAMQIFPPYKLGTVMGMAALVIMFAPAIGPTITGLVLAKFTWHYIFWLFVPFLVLAFIFTLTSMENVYHQTQTPVDWLSIVESSIGFAGIVVGTTMASDAGWLSLEVGLALLVGVIGLVLYARRQLSLTNPMLNLRVFANKQFTVGTLLVMLDFGVILASMYLLPMYLQRVMGLPVAMTGLVMLPGGIVNAAVSAIAGRMYDSHGAKWLSRGGFVIAILGVLILLNSGAQSPLWWIILGHVVLMIGAPLAMSPAQTYGLNSLNGAESADGSALLNTLQQIVGAVSTAVATSMLALGSAKAAGQTGLTIGSHFGFMFVLILAIIGLIVAFQVKKPQASRDL
>NZ_CP031785.1|WP_003580470.1|2284498_2285830_-|NAD(P)/FAD-dependent-oxidoreductase
MSEYDFDVLYLGSGHGAFDGAGPLAASGKKVGVIESDMIGGTCPNYGCNAKITLDTPVVLQRMAERMQGIVSGSITINWSELVAHKQAVIKPLPTNIGSNLKQTGVTIIHGHGKFIDPHSITVAGKTYTAENMVIATGRRPHHLDIPGTELAHDSRAFMDLKTLPKRIGILGSGYISMEFATIANAAGAEVSVFMHADKALREFHQPFVKAVMADMTKRGVKFIPSADVQALKQTAQGIAIQYGDHQEQQVDWVLDATGRIPNDDQIGLEAAGVTFSQRGIAVDDHLRTNVPNIFASGDVLDKPQPKLTPTATFESYYLFQLLSGQTTDPIDYPAIPSTVYTTPRIAKVGVTPEEAADGDYQVVRNHIPDDWYHQTDQETMGDSILIFDRDHHLVGATEFSAQAEDAINTLLPAIVFHFSKQQMWQMAHIFPSESAAAWHKIR
>NZ_CP031785.1|WP_003586316.1|2300921_2301599_-|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSEVTVIDTASPKVLTDLIEALRNDLDKVVLSNDQLEPQEIRKASLWIGDPMLELDLDKLFQRLIYKRMELLIENQRLVELIDQSQQMAMYLLQDPFLSDLPVTVEPGGKLEQIMKYCNVHFDEAVTTESISKIEALIQTLTKLEEKKLVILTNVSHYLSARDFFAVTEQIGDTELQVILIEFSKVNRKKYFEKCQYIYIDEDFVDSRELD
>NZ_CP031785.1|WP_003586314.1|2301595_2301901_-|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVLTSENRRNYRKFRKALINEGFLMMQYSIYVRVCSTKKSAEFLEHRIAAMKPPIGTVQTLMVTEAQYQAMHFLVGEAKQDIRNSADRTVII
>NZ_CP031785.1|WP_003586311.1|2301878_2302784_-|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSLIVTQHCKVTTKNRTLVVQTDGEVNNVPIEDINQVVFTTTRALLSADAITTLAEANAKVIFSGRDGQPVTETTNLYSDRRKADLVRLQVNWPKSLVENLWTKIVAAKVSNQAQVTKLCGYDNQSLLDDLDTLEINDHSNREATAARKYFKLIFGDDFSRSDICATNAALNYGYSILLSTTNRAIVSAGHITEIGMHHSSVANQYNLGSDLMEPFRPAIDYWVANQKFTDLTPNIKYGLIALLNLEVTFNGKKALLQNALDEHVENCLAYLDGKRNNCRIEVEFPNEVSSDAFNDHV
>NZ_CP031785.1|WP_019894961.1|2302978_2307061_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MTKLGKPYGIGVDIGSNSIGFAAVDENSHLIRLKGKTVIGARLFEEGKAAADRRASRTTRRRLSRNRWRLSFLRDFFESHITPTDPNFFMRQKYSEISPKDKARYKYEKRLFNDRTDAEFYQQYPTMYHLRTRLLTDPSKADVREIYFAIHHILKSRGHFLTSGYAKDFNTNKVALNEIFPALQDAYAQVYPDLDITFDENKVNEFKTVLLDEKATPSDTQRALVNLLLAEDGDKDILKQQKQVLTEFAKAVVGLKTKLNVALGTEVDSSEATAWNFSLGQLDDKWAGIESAMTDEGTEILDQIRDLYRARLLNGIVPAGKTLSQAKVDDYEQHHEDLELFKDYLKQLEDDGMAKAIRQLYDRYIDGDDAKPFVREDFVKALTKEVTAHPNAKSPELLERLVQPDFMLKQRNKANGAIPVQMQQRELDQIIKNQSVYYDWLAAPNPVEKHRQSMPYQLDELLNFRIPYYVGPLVTAKEQKAAQGGVFAWMVRKDPDGNITPYNFDEKVDREASANTFIQRMKTTDTYLIGEDVLPKQSLLYQSYEVLNELNNVRVNDNKLSFDQKQQVLGELFERHNTVTIKQFVDNLLAHGDYDRIPEVRGLADEKRFLSSLSTYNQLKGILHEAIDDSDKQTDIEKIIAWSTIFEDKAIFKTKLNEISWLNAGMINSLANIRYRGWGQFSHKLLNELTLSTGRTVFEELLISSHNLMQILTDEVLKQKIAELNAHELKASGIYAAIDDAYTSPSNKKALRQVLSVIDDITNAAGQAPNWLYIETADGDGVPGKRTNSRQRKIQEIYVNAAQELITSSVRGELEDKIASRADFTDRLVLYFMQGGRDIYTGEPLNIDNLSSYDIDHILPQSLIKDNSLDNRVLVHPLVNREKDTIFASTRFAKQMNGMWRQWHAAGLISSRKLRNLQMRPDEIDKYASGFVARQLVETRQIIKLTEQIVADQYPDAKIIAVKAGLSSQLRKELDFPKNREVNHYHHAFDAFLAARIGTYLLKRYPNLEPFFTYGKFKKTEVKKLKSFNFIRDMTHAKDKIVAKETGEIVWDNASDINELDRIYNFKRMLITHEVRFETASLFKQTLYAAKNSKNRGGSRQLIPKKKGYLVDIYGGYTQETGSYLSVVRLTKKAMYAVVKVSTRDAAKLAVAKSISEQKENETLKKIIDGKLSKTSKKGKTTHQLFEIVLPRVGQKTLFKNSKYNQFLVNSDTYMHNYQELWMPREYQRMWKDILLSNHGDAQLEGQLDQIFKFIVSQVNSYFNLYDINQFRKKIADATDKFAKLPTHDTDNARGKIATIGQLLIGLQANAMRSDLRNLDIKTPFGLLQIGTGITLDLDTSIIYQSPTGLFEREVPLTDL
>NZ_CP031785.1|WP_149350212.1|2307209_2308004_-|hypothetical-protein
MEATKLAKRKQWPVPFSQTEPHFTFNNWLKFFSVVLFAYLLFYTRNPIGGFFNMSGTTFLNVANGWTRAVVVFGGVLYCAIIFAGAVWAAGWDGLSQLFASFRWRDIWYVFAYGILYLIATTLGRILGDLVPIRFGVDFVNTLEAAQFGNLGAFSLISFRAFFMTLATQLTAVMIFLASQQLFSRLATKHRRWALFLTYLLALTVTAVVTTTPLAPHVFVNIASGLIAQLPLYWVYRRSRNILVVTLSAFILMHVMIGLAVMLG
>NZ_CP031785.1|WP_003571221.1|2308004_2309171_-|hypothetical-protein
MSRQNLMILIVDLVLIIIFIGGFGWGIGTVKRYQVEPNTSRTETNTDSLYSESRFEKTLQKFKRLDLMVRLGPVKDAKTFNYTPDEFNVKYSSQPIVSGLKATKTLNAETGEVEVCTTMTPQGVTVAGDYLLTTAYDHDGFHNSVMYIQDLKTGKLLNTVVLNGRPHVGGLTYDAKNDNIWICGRRNNAAEVFAIKLKTALTYNVDKKAKAVAYSQRAQLGNISRASFVTYYENALFVGFFNPTGKGNIQRYPLNDKGQVVGKSLTSSISNQFDVLTQSVLHQDILSKIQGMAFYGDYTILSQSYGGGNSTLYIFKTDPKKTIFRASDAIDTFDMPSHLEQISTHDGRMYMMFESAAYAYRHRSTNQLDRVLSMNLEGFVQLVLKEEK
>NZ_CP031785.1|WP_003566940.1|2309394_2309769_+|YxeA-family-protein
MNMKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYAYTQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
>NZ_CP031785.1|WP_003566944.1|2309837_2310161_+|DUF4870-domain-containing-protein
MTNEHKVLRGLSYISVIFAPILFPILVWIFTPQGSVTRDTAKHALWLHIIPTLLSIFIFMIIGGVGFFTNSINATSAVSLILLLVAMVVDIGMVVYNIYTGIKIITS
>NZ_CP031785.1|WP_003584829.1|2310232_2311960_-|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWVRPDLKRYRGLLFWSLILGVMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGCALWIMLLLLFQVLILPWWGLVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSKRFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTVHSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLVDGQDVLTYQQHRTNLFAVLDQSPFLFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRVIFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
>NZ_CP031785.1|WP_003571227.1|2311940_2313683_-|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLMRLSGMKRIMTMLAGFALVQAFVILLQGKFLAEGIVHSWNRQSLAGLWLPLGLFATAFVIRQLIVWVRNRIGARFAMTSSAWLQAQLLKHLYALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWVLVAYIWYENWLTGFTLLIMFPIIILFMVILGLAAQDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISRQYANNVYDVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGAIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMKAIWQVIDQPLPTDTNVLPAFSRWQAQDTVTINHLDFTYPNERAGIQDANLQFTGTEKVAIIGASGSGKSTLLNLIGGFLQPQKAAMTVRGTKVPHMTQAAWQDHLSYIPQDPYLFADTIAANIRFYRPDASDEDVKQAAEAAGLSHWIETLADGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAELKETLVPLFKNRLVIFATHRLHWLNQMDRVIVVDGGKIIAEGTPSELAAHSKPYQALVHEMRGEFNALVEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	806-835	0	1.0
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	KC171647	Lactobacillus phage PL-1, complete genome	794-823	0	1.0
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NC_022756	Lactobacillus phage J-1, complete genome	794-823	0	1.0
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	MF999224	Lactobacillus phage LJ, complete genome	17194-17223	0	1.0
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NC_004112	Lactobacillus phage A2, complete genome	806-835	0	1.0
NZ_CP031785_3	3.31\|2300832\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300832-2300861	30	KC171647	Lactobacillus phage PL-1, complete genome	28145-28174	0	1.0
NZ_CP031785_3	3.31\|2300832\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300832-2300861	30	NC_022756	Lactobacillus phage J-1, complete genome	30196-30225	0	1.0
NZ_CP031785_3	3.31\|2300832\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300832-2300861	30	MF999224	Lactobacillus phage LJ, complete genome	3838-3867	0	1.0
NZ_CP031785_3	3.25\|2300436\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300436-2300465	30	EU246945	Lactobacillus phage Lrm1, complete sequence	17453-17482	1	0.967
NZ_CP031785_3	3.25\|2300436\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300436-2300465	30	NC_011104	Lactobacillus phage Lrm1, complete genome	17453-17482	1	0.967
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	EU246945	Lactobacillus phage Lrm1, complete sequence	806-835	1	0.967
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NC_011104	Lactobacillus phage Lrm1, complete genome	806-835	1	0.967
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	MH983004	Lactobacillus phage BH1, complete genome	794-823	1	0.967
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	CP002494	Enterococcus faecalis 62 plasmid EF62pC, complete sequence	23366-23395	4	0.867
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NZ_CP008814	Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence	30841-30870	4	0.867
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NZ_CP015885	Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence	41813-41842	4	0.867
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NZ_CP046110	Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence	18896-18925	4	0.867
NZ_CP031785_3	3.11\|2299512\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299512-2299541	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	6674-6703	5	0.833
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	KT997876	Uncultured phage_Deep-GF0-KM16-C193 genomic sequence	8264-8293	5	0.833
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	NZ_LR134417	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 8	62852-62881	6	0.8
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	MN013084	Klebsiella phage vB_KaeM_KaAlpha, complete genome	97023-97052	6	0.8
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	LT614807	Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I	94243-94272	6	0.8
NZ_CP031785_3	3.1\|2298852\|30\|NZ_CP031785\|CRISPRCasFinder,CRT	2298852-2298881	30	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	189876-189905	7	0.767
NZ_CP031785_3	3.14\|2299710\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299710-2299739	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	104218-104247	7	0.767
NZ_CP031785_3	3.14\|2299710\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299710-2299739	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	105358-105387	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950310-950339	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	MT601272	Bacillus phage vB_BsuS-Goe11, complete genome	21559-21588	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	MT366947	Bacillus phage Hyb2phi3Ts-SPbeta, complete genome	20807-20836	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KY030782	Bacillus phage phi3T, complete genome	20807-20836	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	MT366948	Bacillus phage Hyb3phi3Ts-SPbeta, complete genome	20807-20836	7	0.767
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	MT366945	Bacillus phage phi3Ts, complete genome	20807-20836	7	0.767
NZ_CP031785_3	3.18\|2299974\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299974-2300003	30	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	376623-376652	7	0.767
NZ_CP031785_3	3.18\|2299974\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299974-2300003	30	NC_019313	Sinorhizobium meliloti plasmid pHRC017, complete sequence	183578-183607	7	0.767
NZ_CP031785_3	3.21\|2300172\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300172-2300201	30	NZ_AP018257	Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome	346559-346588	7	0.767
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP016462	Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence	79182-79211	7	0.767
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	KX833905	Lactococcus phage PLg-TB25, complete genome	20840-20869	7	0.767
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	148041-148070	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NZ_CP041205	Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence	533174-533203	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	399866-399895	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	CP047390	Agrobacterium sp. CGMCC 11546 plasmid pB	172783-172812	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NZ_CP033036	Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence	283508-283537	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NC_003064	Agrobacterium fabrum str. C58 plasmid At, complete sequence	450407-450436	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	311399-311428	8	0.733
NZ_CP031785_3	3.6\|2299182\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299182-2299211	30	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	311483-311512	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	KP671755	Vibrio phage ValKK3, complete genome	16016-16045	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	MH321493	Salmonella phage Skate, complete genome	25420-25449	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	KY860935	Salmonella phage LPST10, complete genome	16180-16209	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	MN871490	UNVERIFIED: Salmonella phage SEzh_1, complete genome	25308-25337	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	KT919972	Vibrio phage phi-Grn1, complete genome	226148-226177	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	MN692673	Salmonella phage VB_StyS_BS5, complete genome	15797-15826	8	0.733
NZ_CP031785_3	3.10\|2299446\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299446-2299475	30	MH791402	UNVERIFIED: Salmonella phage Segz_1, complete genome	19684-19713	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950150-950179	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950190-950219	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950270-950299	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950390-950419	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019135	Synechococcus phage ACG-2014a isolate Syn7803C101, complete genome	54737-54766	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019114	Synechococcus phage ACG-2014a isolate Syn7803US60, complete genome	54643-54672	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019138	Synechococcus phage ACG-2014a isolate Syn7803C107, complete genome	54649-54678	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019122	Synechococcus phage ACG-2014a isolate Syn7803US79, complete genome	54638-54667	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019055	Synechococcus phage ACG-2014a isolate Syn7803C86, complete genome	54736-54765	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019038	Synechococcus phage ACG-2014a isolate Syn7803C59, complete genome	54423-54452	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019068	Synechococcus phage ACG-2014a isolate Syn7803US102, complete genome	54642-54671	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019137	Synechococcus phage ACG-2014a isolate Syn7803C104, complete genome	54733-54762	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019157	Synechococcus phage ACG-2014a isolate Syn7803C31, complete genome	54737-54766	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019087	Synechococcus phage ACG-2014a isolate Syn7803US19, complete genome	54638-54667	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019076	Synechococcus phage ACG-2014a isolate Syn7803US112, complete genome	54642-54671	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019065	Synechococcus phage ACG-2014a isolate Syn7803C99, complete genome	54636-54665	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019026	Synechococcus phage ACG-2014a isolate Syn7803C42, complete genome	54644-54673	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019081	Synechococcus phage ACG-2014a isolate Syn7803US117, complete genome	54643-54672	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019033	Synechococcus phage ACG-2014a isolate Syn7803C53, complete genome	54489-54518	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	NC_023584	Synechococcus phage S-MbCM100, complete genome	55431-55460	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019153	Synechococcus phage ACG-2014a isolate Syn7803C26, complete genome	54638-54667	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019158	Synechococcus phage ACG-2014a isolate Syn7803C33, complete genome	54642-54671	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019067	Synechococcus phage ACG-2014a isolate Syn7803US101, complete genome	54643-54672	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019039	Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome	54637-54666	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019030	Synechococcus phage ACG-2014a isolate Syn7803C47, complete genome	54641-54670	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019163	Synechococcus phage ACG-2014a isolate Syn7803C38, complete genome	54633-54662	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019116	Synechococcus phage ACG-2014a isolate Syn7803US62, complete genome	54452-54481	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019088	Synechococcus phage ACG-2014a isolate Syn7803US1, complete genome	54724-54753	8	0.733
NZ_CP031785_3	3.15\|2299776\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299776-2299805	30	KJ019084	Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome	54637-54666	8	0.733
NZ_CP031785_3	3.21\|2300172\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300172-2300201	30	NZ_CP014149	Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence	4157-4186	8	0.733
NZ_CP031785_3	3.21\|2300172\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300172-2300201	30	NZ_CP032533	Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence	46186-46215	8	0.733
NZ_CP031785_3	3.26\|2300502\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300502-2300531	30	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	208539-208568	8	0.733
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	KX365748	Pseudoalteromonas phage BS5, complete genome	1820-1849	8	0.733
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	NC_021067	Vibrio phage helene 12B3 genomic sequence	18084-18113	8	0.733
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	MG592553	Vibrio phage 1.187.O._10N.286.49.F1, partial genome	77631-77660	8	0.733
NZ_CP031785_3	3.29\|2300700\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300700-2300729	30	HQ634195	Vibrio phage eugene 12A10 genomic sequence	34375-34404	8	0.733
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	MN657066	Psychrobacter sp. strain ANT_P28 plasmid pA28P2, complete sequence	2446-2475	8	0.733
NZ_CP031785_3	3.4\|2299050\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299050-2299079	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	407276-407305	9	0.7
NZ_CP031785_3	3.12\|2299578\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2299578-2299607	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1556860-1556889	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	55080-55109	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	15528-15557	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	244734-244763	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	186579-186608	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	87826-87855	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	181875-181904	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	212087-212116	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	87047-87076	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	60107-60136	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	215777-215806	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	139761-139790	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	73057-73086	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	73059-73088	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	10672-10701	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	51375-51404	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	18843-18872	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026800	Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence	16783-16812	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	70426-70455	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	51763-51792	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	171006-171035	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	37214-37243	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	99920-99949	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	91633-91662	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	74402-74431	9	0.7
NZ_CP031785_3	3.22\|2300238\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300238-2300267	30	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	28338-28367	9	0.7
NZ_CP031785_3	3.30\|2300766\|30\|NZ_CP031785\|CRISPRCasFinder,CRT,PILER-CR	2300766-2300795	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	70436-70465	9	0.7

1. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 0, identity: 1.0

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggcagtatatatggctg	Protospacer
******************************

2. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 0, identity: 1.0

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggcagtatatatggctg	Protospacer
******************************

3. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 0, identity: 1.0

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggcagtatatatggctg	Protospacer
******************************

4. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 0, identity: 1.0

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggcagtatatatggctg	Protospacer
******************************

5. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 0, identity: 1.0

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggcagtatatatggctg	Protospacer
******************************

6. spacer 3.31|2300832|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 0, identity: 1.0

ttgctatctggcttaaatgttacattgcga	CRISPR spacer
ttgctatctggcttaaatgttacattgcga	Protospacer
******************************

7. spacer 3.31|2300832|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 0, identity: 1.0

ttgctatctggcttaaatgttacattgcga	CRISPR spacer
ttgctatctggcttaaatgttacattgcga	Protospacer
******************************

8. spacer 3.31|2300832|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 0, identity: 1.0

ttgctatctggcttaaatgttacattgcga	CRISPR spacer
ttgctatctggcttaaatgttacattgcga	Protospacer
******************************

9. spacer 3.25|2300436|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 1, identity: 0.967

tggggcttgtgggtgtacccaactgaatgt	CRISPR spacer
tggggcttgtgggtgttcccaactgaatgt	Protospacer
**************** *************

10. spacer 3.25|2300436|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 1, identity: 0.967

tggggcttgtgggtgtacccaactgaatgt	CRISPR spacer
tggggcttgtgggtgttcccaactgaatgt	Protospacer
**************** *************

11. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 1, identity: 0.967

gaaattcattattggcagtatatatggctg	CRISPR spacer
aaaattcattattggcagtatatatggctg	Protospacer
.*****************************

12. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 1, identity: 0.967

gaaattcattattggcagtatatatggctg	CRISPR spacer
aaaattcattattggcagtatatatggctg	Protospacer
.*****************************

13. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 1, identity: 0.967

gaaattcattattggcagtatatatggctg	CRISPR spacer
aaaattcattattggcagtatatatggctg	Protospacer
.*****************************

14. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to CP002494 (Enterococcus faecalis 62 plasmid EF62pC, complete sequence) position: , mismatch: 4, identity: 0.867

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggtagtatataaacctg	Protospacer
***************.******** . ***

15. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008814 (Enterococcus faecalis ATCC 29212 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.867

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggtagtatataaacctg	Protospacer
***************.******** . ***

16. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015885 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p2, complete sequence) position: , mismatch: 4, identity: 0.867

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggtagtatataaacctg	Protospacer
***************.******** . ***

17. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046110 (Enterococcus faecalis strain 133170041-3 plasmid pTEF2, complete sequence) position: , mismatch: 4, identity: 0.867

gaaattcattattggcagtatatatggctg	CRISPR spacer
gaaattcattattggtagtatataaacctg	Protospacer
***************.******** . ***

18. spacer 3.11|2299512|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 5, identity: 0.833

taatc--ttgattatgatgcgagttatattga	CRISPR spacer
--atcgtttgattacgatgcaagttatattta	Protospacer
  ***  *******.*****.********* *

19. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KT997876 (Uncultured phage_Deep-GF0-KM16-C193 genomic sequence) position: , mismatch: 5, identity: 0.833

aatccaga-tttagaattgctttttaaacat	CRISPR spacer
-ttgcagattttagaattgcttttgaaacaa	Protospacer
  * **** *************** *****

20. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR134417 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 8) position: , mismatch: 6, identity: 0.8

aatccagatttagaattgctttttaaacat	CRISPR spacer
atttcagattaagaatcgctttttaaataa	Protospacer
* *.****** *****.**********.*

21. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MN013084 (Klebsiella phage vB_KaeM_KaAlpha, complete genome) position: , mismatch: 6, identity: 0.8

gaaattcattattggcagtatatatggctg	CRISPR spacer
gtatagcattattggcactatatatggcgg	Protospacer
* *   *********** ********** *

22. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to LT614807 (Cronobacter phage Pet-CM3-4 genome assembly, chromosome: I) position: , mismatch: 6, identity: 0.8

gaaattcattattggcagtatatatggctg	CRISPR spacer
gtatagcattattggcactatatatggcgg	Protospacer
* *   *********** ********** *

23. spacer 3.1|2298852|30|NZ_CP031785|CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 7, identity: 0.767

catcaattgcgggaagaactcgaatttcct	CRISPR spacer
catttcttgcgggacgaactcgaattttga	Protospacer
***.  ******** ************.

24. spacer 3.14|2299710|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

gccggcgttagcttttgtgagggtacgatg	CRISPR spacer
cgtgtcggtagcttttgtgagggtaccaag	Protospacer
  .* ** ****************** * *

25. spacer 3.14|2299710|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

gccggcgttagcttttgtgagggtacgatg	CRISPR spacer
cgtgtcggtagcttttgtgagggtaccaag	Protospacer
  .* ** ****************** * *

26. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
atagctatacaattaacaatcagcactcaa	Protospacer
*. .  ******.********** ******

27. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MT601272 (Bacillus phage vB_BsuS-Goe11, complete genome) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
aagggaatacatcaaacaatcagaactcaa	Protospacer
*  ...***** * ****************

28. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
aaggaaatacatcaaacaatcagaactcat	Protospacer
*  .*.***** * ***************

29. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
aaggaaatacatcaaacaatcagaactcat	Protospacer
*  .*.***** * ***************

30. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
aaggaaatacatcaaacaatcagaactcat	Protospacer
*  .*.***** * ***************

31. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 7, identity: 0.767

accaagatacaactaacaatcagaactcaa	CRISPR spacer
aaggaaatacatcaaacaatcagaactcat	Protospacer
*  .*.***** * ***************

32. spacer 3.18|2299974|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tacggtaatgcggaaaattcgcggcgacgt	CRISPR spacer
agccgagatgcggaaaattcgcggcaacga	Protospacer
 .* * .******************.***

33. spacer 3.18|2299974|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_019313 (Sinorhizobium meliloti plasmid pHRC017, complete sequence) position: , mismatch: 7, identity: 0.767

tacggtaatgcggaaaattcgcggcgacgt	CRISPR spacer
aagggagatgcggaagattcgcggcgacaa	Protospacer
 * ** .********.************.

34. spacer 3.21|2300172|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 7, identity: 0.767

ctaattttgatatatcaaagcgaacgcttt	CRISPR spacer
atttatttggaatatcaaagcgaacgcttg	Protospacer
 *   ****. ******************

35. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 7, identity: 0.767

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
aatgatcagccatgcatcgctgccaccaac	Protospacer
..  .***** *** ***************

36. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KX833905 (Lactococcus phage PLg-TB25, complete genome) position: , mismatch: 7, identity: 0.767

aatccagatttagaattgctttttaaacat	CRISPR spacer
atctcagatttagaaaggctttttaaataa	Protospacer
* ..***********  **********.*

37. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
tgttgggcacggtataaccgttgccgaggc	Protospacer
. *** ***************** ** ..

38. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

39. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

40. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to CP047390 (Agrobacterium sp. CGMCC 11546 plasmid pB) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

41. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033036 (Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

42. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_003064 (Agrobacterium fabrum str. C58 plasmid At, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

43. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

44. spacer 3.6|2299182|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 8, identity: 0.733

ccttgcgcacggtataaccgttgacgtaag	CRISPR spacer
ccttgcgcacgatatagccgttgggattga	Protospacer
***********.****.******. .* ..

45. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KP671755 (Vibrio phage ValKK3, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
actgactaaaatcaaagattttcttttccc	Protospacer
.******** *********** **. .*..

46. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MH321493 (Salmonella phage Skate, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
cctgacttacatcaaagattcgctgcatta	Protospacer
 ****** ************.***   .*

47. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KY860935 (Salmonella phage LPST10, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
cctgacttacatcaaagattcgctgcatta	Protospacer
 ****** ************.***   .*

48. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MN871490 (UNVERIFIED: Salmonella phage SEzh_1, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
cctgacttacatcaaagattcgctgcatta	Protospacer
 ****** ************.***   .*

49. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KT919972 (Vibrio phage phi-Grn1, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
actgactaaaatcaaagattttcttttccc	Protospacer
.******** *********** **. .*..

50. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MN692673 (Salmonella phage VB_StyS_BS5, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
cctgacttacatcaaagattcgctgcatta	Protospacer
 ****** ************.***   .*

51. spacer 3.10|2299446|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MH791402 (UNVERIFIED: Salmonella phage Segz_1, complete genome) position: , mismatch: 8, identity: 0.733

gctgactaacatcaaagatttgctcacctt	CRISPR spacer
cctgacttacatcaaagattcgctgcatta	Protospacer
 ****** ************.***   .*

52. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gtagctatacaattaacaatcagcactcaa	Protospacer
.. .  ******.********** ******

53. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gtagctatacaattaacaatcagcactcaa	Protospacer
.. .  ******.********** ******

54. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gtagctatacaattaacaatcagcactcaa	Protospacer
.. .  ******.********** ******

55. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gtagctatacaattaacaatcagcactcaa	Protospacer
.. .  ******.********** ******

56. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019135 (Synechococcus phage ACG-2014a isolate Syn7803C101, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

57. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019114 (Synechococcus phage ACG-2014a isolate Syn7803US60, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

58. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019138 (Synechococcus phage ACG-2014a isolate Syn7803C107, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

59. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019122 (Synechococcus phage ACG-2014a isolate Syn7803US79, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

60. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019055 (Synechococcus phage ACG-2014a isolate Syn7803C86, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

61. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019038 (Synechococcus phage ACG-2014a isolate Syn7803C59, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

62. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019068 (Synechococcus phage ACG-2014a isolate Syn7803US102, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

63. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019137 (Synechococcus phage ACG-2014a isolate Syn7803C104, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

64. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019157 (Synechococcus phage ACG-2014a isolate Syn7803C31, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

65. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019087 (Synechococcus phage ACG-2014a isolate Syn7803US19, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

66. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019076 (Synechococcus phage ACG-2014a isolate Syn7803US112, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

67. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019065 (Synechococcus phage ACG-2014a isolate Syn7803C99, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

68. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019026 (Synechococcus phage ACG-2014a isolate Syn7803C42, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

69. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019081 (Synechococcus phage ACG-2014a isolate Syn7803US117, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

70. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019033 (Synechococcus phage ACG-2014a isolate Syn7803C53, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

71. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_023584 (Synechococcus phage S-MbCM100, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

72. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019153 (Synechococcus phage ACG-2014a isolate Syn7803C26, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

73. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019158 (Synechococcus phage ACG-2014a isolate Syn7803C33, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

74. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019067 (Synechococcus phage ACG-2014a isolate Syn7803US101, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

75. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019039 (Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

76. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019030 (Synechococcus phage ACG-2014a isolate Syn7803C47, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

77. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019163 (Synechococcus phage ACG-2014a isolate Syn7803C38, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

78. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019116 (Synechococcus phage ACG-2014a isolate Syn7803US62, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

79. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019088 (Synechococcus phage ACG-2014a isolate Syn7803US1, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

80. spacer 3.15|2299776|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KJ019084 (Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome) position: , mismatch: 8, identity: 0.733

accaagatacaactaacaatcagaactcaa	CRISPR spacer
gaccttatacaactaatattcagaactcat	Protospacer
. *   **********.* **********

81. spacer 3.21|2300172|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014149 (Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence) position: , mismatch: 8, identity: 0.733

ctaattttgatatatcaaagcgaacgcttt	CRISPR spacer
ttaattctgatatatcaaagcaaaaggaaa	Protospacer
.*****.**************.** *

82. spacer 3.21|2300172|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 8, identity: 0.733

ctaattttgatatatcaaagcgaacgcttt	CRISPR spacer
aaggatttgatatttcaaagcgaatgctat	Protospacer
  .. ******** **********.*** *

83. spacer 3.26|2300502|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.733

tgtacctagcattaataatattgcgccaaa	CRISPR spacer
agtacatagcattaataatattctttctga	Protospacer
 **** **************** . .* .*

84. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to KX365748 (Pseudoalteromonas phage BS5, complete genome) position: , mismatch: 8, identity: 0.733

aatccagatttagaattgctttttaaacat	CRISPR spacer
aatccagatttagaattgtttttctgctca	Protospacer
******************.****. . .

85. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_021067 (Vibrio phage helene 12B3 genomic sequence) position: , mismatch: 8, identity: 0.733

aatccagatttagaattgctttttaaacat	CRISPR spacer
tcgtaaaatttagaattgccttttaaatat	Protospacer
   . *.************.*******.**

86. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MG592553 (Vibrio phage 1.187.O._10N.286.49.F1, partial genome) position: , mismatch: 8, identity: 0.733

aatccagatttagaattgctttttaaacat	CRISPR spacer
tcgtaaaatttagaattgccttttaaatat	Protospacer
   . *.************.*******.**

87. spacer 3.29|2300700|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to HQ634195 (Vibrio phage eugene 12A10 genomic sequence) position: , mismatch: 8, identity: 0.733

aatccagatttagaattgctttttaaacat	CRISPR spacer
tcgtaaaatttagaattgccttttaaatat	Protospacer
   . *.************.*******.**

88. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to MN657066 (Psychrobacter sp. strain ANT_P28 plasmid pA28P2, complete sequence) position: , mismatch: 8, identity: 0.733

gaaattcattattggcagtatatatggctg	CRISPR spacer
ctggatcgttattggcattatatatggcag	Protospacer
  .. **.********* ********** *

89. spacer 3.4|2299050|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.7

ccggattcaatcgcctgaacgtaagccttt	CRISPR spacer
ggaaattcaaccgcctgaacgcaagcccaa	Protospacer
  ..******.**********.*****.

90. spacer 3.12|2299578|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.7

aaacgctattgccacacaagaccttgaaga	CRISPR spacer
ccgccgtattgccagacaagaccttgagct	Protospacer
  .*  ******** ************.

91. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

92. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

93. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

94. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

95. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

96. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

97. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

98. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

99. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

100. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

101. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

102. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

103. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

104. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

105. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

106. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

107. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026800 (Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

108. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

109. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

110. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

111. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

112. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

113. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

114. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

115. spacer 3.22|2300238|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

ggacgtcagcaatgaatcgctgccaccaac	CRISPR spacer
atctgtcagtaatgaatcgctgctacccga	Protospacer
.  .*****.*************.*** .

116. spacer 3.30|2300766|30|NZ_CP031785|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.7

gaaattcattattggcagtatatatggctg	CRISPR spacer
aaaattcattattgccaatatataaacaat	Protospacer
.************* **.****** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18158 : 66036

Planktothrix_phage(20.0%)

holin,protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003586382.1\|18158_19016_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003568482.1\|19095_19278_-	hypothetical protein	NA	NA	NA	NA
WP_003659010.1\|19328_19508_-	hypothetical protein	NA	NA	NA	NA
WP_003577228.1\|19996_21232_-	CHAP domain-containing protein	NA	NA	NA	NA
WP_003577229.1\|21435_24009_-	ABC transporter permease	NA	NA	NA	NA
WP_003577230.1\|24021_24723_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-33	40.5
WP_003568490.1\|25002_25554_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003584074.1\|25597_26404_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003577233.1\|26408_26711_+	hypothetical protein	NA	NA	NA	NA
WP_003659016.1\|27549_28053_-	hypothetical protein	NA	NA	NA	NA
WP_016363468.1\|28072_30223_-	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_003577235.1\|30567_31341_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_003577236.1\|31522_32128_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003572888.1\|32251_33145_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003586390.1\|33193_33832_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003568512.1\|34060_35437_+	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_003577237.1\|35659_36004_-	hypothetical protein	NA	NA	NA	NA
WP_003577238.1\|36079_36439_-	hypothetical protein	NA	NA	NA	NA
WP_003572892.1\|36679_38122_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003577239.1\|38316_38952_+	hypothetical protein	NA	NA	NA	NA
WP_003577240.1\|39001_39313_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003574021.1\|39590_40511_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003577243.1\|40856_41468_-	hypothetical protein	NA	NA	NA	NA
WP_011673947.1\|41824_42298_+	hypothetical protein	NA	NA	NA	NA
WP_003586401.1\|42542_44693_-	DUF1906 domain-containing protein	NA	NA	NA	NA
WP_129719070.1\|45043_45754_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_003577245.1\|45740_46070_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_003577246.1\|46950_47166_-	hypothetical protein	NA	NA	NA	NA
WP_003562562.1\|47516_48392_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003562571.1\|48737_49388_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_003577277.1\|49784_50477_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003562576.1\|51174_51495_+	hypothetical protein	NA	NA	NA	NA
WP_003577278.1\|51683_52559_-	Rgg/GadR/MutR family transcriptional regulator	A0A1X9I6E0	Streptococcus_phage	2.3e-11	26.6
WP_003577279.1\|52650_54243_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.6e-12	28.5
WP_149349686.1\|54580_55954_-	MFS transporter	NA	NA	NA	NA
WP_016363309.1\|56130_56454_-	hypothetical protein	NA	NA	NA	NA
WP_003577281.1\|56634_59946_-	MMPL family transporter	NA	NA	NA	NA
WP_003562586.1\|59942_60545_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003572931.1\|60796_61057_-	hypothetical protein	NA	NA	NA	NA
WP_003562592.1\|61270_61933_-	ABC transporter permease	NA	NA	NA	NA
WP_003562594.1\|61932_62862_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003568628.1\|62873_63503_-	ABC transporter permease	NA	NA	NA	NA
WP_003577282.1\|63505_64759_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.5e-14	43.0
WP_003577283.1\|65382_66036_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

304991 : 361609

unidentified_phage(50.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003574021.1\|304991_305912_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003577506.1\|306024_306507_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003573365.1\|306519_307437_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003563140.1\|307423_308245_+	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_003563142.1\|308281_308662_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003577511.1\|308927_310169_+	DUF2325 domain-containing protein	NA	NA	NA	NA
WP_003586606.1\|310287_311490_-	putative C-S lyase	NA	NA	NA	NA
WP_003586608.1\|311476_312556_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_003577518.1\|312746_314072_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003577520.1\|314108_314447_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_149349712.1\|314495_314828_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_003586610.1\|314914_315955_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_003586613.1\|315939_317733_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003577527.1\|318161_319409_-	peptidase T	NA	NA	NA	NA
WP_003563175.1\|319524_321165_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003577530.1\|321400_322042_-	N-acetyltransferase	NA	NA	NA	NA
WP_003577532.1\|322311_322560_+	hypothetical protein	NA	NA	NA	NA
WP_003607507.1\|322893_323100_-	hypothetical protein	NA	NA	NA	NA
WP_003577536.1\|323369_323936_+	ECF transporter S component	NA	NA	NA	NA
WP_003577538.1\|323942_325286_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-15	33.2
WP_003577541.1\|325290_325938_+	energizing module component of thiamin-regulated hydroxymethylpyrimidine ECF transporter	NA	NA	NA	NA
WP_003577544.1\|326025_326718_+	thiaminase II	NA	NA	NA	NA
WP_003577547.1\|326698_327199_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_003577548.1\|327211_328054_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_003577550.1\|328050_328692_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_003577552.1\|328681_329509_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003586619.1\|329893_331342_+	amino acid permease	NA	NA	NA	NA
WP_003577556.1\|331649_331895_+	hypothetical protein	NA	NA	NA	NA
WP_003568895.1\|332275_333283_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_003577558.1\|333343_333736_+	D-ribose pyranase	NA	NA	NA	NA
WP_003577560.1\|333804_335307_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-21	28.6
WP_149349714.1\|335290_336271_+	ribose ABC transporter permease	NA	NA	NA	NA
WP_003577564.1\|336327_337287_+	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003563212.1\|337426_338356_+	ribokinase	NA	NA	NA	NA
WP_003577567.1\|338773_340765_-	penicillin-binding protein	NA	NA	NA	NA
WP_149349716.1\|340939_342322_+	MFS transporter	NA	NA	NA	NA
WP_003577571.1\|342302_342737_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003577573.1\|342733_343297_+	hypothetical protein	NA	NA	NA	NA
WP_003573429.1\|343309_343525_+	hypothetical protein	NA	NA	NA	NA
WP_003577575.1\|344339_345029_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003574021.1\|345290_346211_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_076665332.1\|346309_346834_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_003577579.1\|346916_347306_-	YxeA family protein	NA	NA	NA	NA
WP_014271905.1\|347790_348711_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.0e-22	35.0
WP_149349718.1\|348906_349542_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-23	31.3
WP_016363600.1\|349555_350281_-	hypothetical protein	NA	NA	NA	NA
WP_003577587.1\|350280_350961_-	hypothetical protein	NA	NA	NA	NA
WP_003577590.1\|350950_351739_-	hypothetical protein	NA	NA	NA	NA
WP_003604280.1\|352341_353868_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	7.4e-53	31.3
WP_003587755.1\|354138_356235_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003563244.1\|356235_356547_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003563247.1\|356688_357975_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003563248.1\|357991_358414_+	hypothetical protein	NA	NA	NA	NA
WP_003563251.1\|358435_359296_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_003577611.1\|359409_360051_+	AAA family ATPase	NA	NA	NA	NA
WP_003574021.1\|360688_361609_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0

DBSCAN-SWA_3

549782 : 621749

Lactobacillus_phage(56.25%)

holin,integrase,transposase

attL 544452:544464|attR 554602:554614

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
544452:544464	attL	NA	NA	NA	NA
WP_003577893.1\|549782_550712_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	5.9e-106	63.7
WP_003577895.1\|550901_551447_-	hypothetical protein	NA	NA	NA	NA
WP_052915964.1\|551953_552796_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.3e-156	98.9
WP_002816285.1\|552849_553101_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_149349750.1\|553130_554291_-\|integrase	tyrosine-type recombinase/integrase	Q6J1W6	Lactobacillus_phage	9.7e-207	97.8
WP_149349752.1\|554403_554664_-	hypothetical protein	B4XYT0	Lactobacillus_phage	1.9e-09	40.7
554602:554614	attR	NA	NA	NA	NA
WP_016368286.1\|554753_555374_+	hypothetical protein	NA	NA	NA	NA
WP_003572180.1\|555785_556493_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003574021.1\|556689_557610_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003572182.1\|557706_558129_-	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	7.8e-21	39.1
WP_003572184.1\|558121_558475_-	helix-turn-helix transcriptional regulator	A0A141E1M3	Streptococcus_phage	7.7e-14	40.9
WP_003574003.1\|558718_558967_+	hypothetical protein	A0A0P0ID24	Lactobacillus_phage	2.7e-37	97.5
WP_003572187.1\|559008_559209_+	hypothetical protein	NA	NA	NA	NA
WP_003572188.1\|559179_560013_-	TIGR02391 family protein	A0A1S5SBU1	Streptococcus_phage	2.8e-46	37.8
WP_016368112.1\|560073_560832_+	ORF6C domain-containing protein	A0A1B0YEA7	Lactobacillus_phage	7.1e-41	48.9
WP_003572196.1\|561004_561256_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_003572199.1\|561321_561678_+	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	2.0e-62	98.3
WP_003572201.1\|561762_561966_+	hypothetical protein	NA	NA	NA	NA
WP_003586921.1\|561948_562494_-	hypothetical protein	NA	NA	NA	NA
WP_003574021.1\|562805_563726_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_032786488.1\|563734_564067_+	hypothetical protein	NA	NA	NA	NA
WP_010493154.1\|564581_565025_+	autolysin regulatory protein arpU	A0A0P0IZI6	Lactobacillus_phage	1.2e-77	97.3
WP_003574021.1\|565932_566853_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003583407.1\|567496_568495_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-54	39.5
WP_003573729.1\|568690_568909_-	CsbD family protein	NA	NA	NA	NA
WP_010493173.1\|570441_570777_+	ribonucleoside-diphosphate reductase	A0A0N7IRA2	Lactobacillus_phage	6.8e-52	90.6
WP_076626284.1\|570896_571229_+\|transposase	transposase	NA	NA	NA	NA
WP_003582147.1\|571258_571987_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.6e-32	40.1
WP_107791771.1\|571920_572862_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.0e-17	28.2
WP_016383324.1\|572907_573771_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.1e-24	30.5
WP_003582220.1\|574452_574731_+	hypothetical protein	NA	NA	NA	NA
WP_003572355.1\|574742_575009_+	hypothetical protein	NA	NA	NA	NA
WP_003572358.1\|575027_575204_+	hypothetical protein	NA	NA	NA	NA
WP_003572360.1\|575205_575433_+	hypothetical protein	NA	NA	NA	NA
WP_149349755.1\|575475_576717_+	hypothetical protein	NA	NA	NA	NA
WP_149349757.1\|576694_578281_+	DUF5011 domain-containing protein	NA	NA	NA	NA
WP_149349759.1\|578290_578710_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_149349761.1\|578719_579298_+	hypothetical protein	NA	NA	NA	NA
WP_149349763.1\|579324_581784_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_149349766.1\|581780_583838_+	hypothetical protein	NA	NA	NA	NA
WP_003582234.1\|583843_584179_+	hypothetical protein	NA	NA	NA	NA
WP_003583424.1\|584162_584759_+	hypothetical protein	NA	NA	NA	NA
WP_123031249.1\|584739_586668_+	ATP-binding protein	NA	NA	NA	NA
WP_149349768.1\|586669_587680_+	C40 family peptidase	A0A1X9SGZ2	Bradyrhizobium_phage	6.9e-15	38.6
WP_003582241.1\|587695_588340_+	hypothetical protein	NA	NA	NA	NA
WP_149349770.1\|588336_588744_+	thioredoxin family protein	NA	NA	NA	NA
WP_149349772.1\|588733_589555_+	hypothetical protein	NA	NA	NA	NA
WP_149349774.1\|590159_590339_+	plasmid replication protein	NA	NA	NA	NA
WP_149349776.1\|590379_590640_+	hypothetical protein	NA	NA	NA	NA
WP_149349778.1\|590629_591067_+	hypothetical protein	NA	NA	NA	NA
WP_149349780.1\|591059_592304_+	hypothetical protein	NA	NA	NA	NA
WP_047107640.1\|592345_592591_+	hypothetical protein	NA	NA	NA	NA
WP_149349782.1\|592577_595121_+	DUF3991 domain-containing protein	NA	NA	NA	NA
WP_016366483.1\|595460_595604_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_019901854.1\|595805_597011_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	1.2e-87	43.5
WP_079351910.1\|597349_597502_-	hypothetical protein	NA	NA	NA	NA
WP_126353742.1\|597520_597739_-	hypothetical protein	NA	NA	NA	NA
WP_003582061.1\|597741_597885_-	hypothetical protein	NA	NA	NA	NA
WP_149349785.1\|597877_598327_-	nitroreductase	NA	NA	NA	NA
WP_063558472.1\|598339_598786_-	hypothetical protein	NA	NA	NA	NA
WP_149349787.1\|599451_599811_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_076652107.1\|599887_600559_+	class A sortase	NA	NA	NA	NA
WP_016367615.1\|600691_600922_+	hypothetical protein	NA	NA	NA	NA
WP_149349789.1\|602774_602978_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003585301.1\|602952_603150_-	hypothetical protein	NA	NA	NA	NA
WP_149349791.1\|603417_604338_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.0e-22	35.0
WP_149349793.1\|604588_607285_+	VWA domain-containing protein	NA	NA	NA	NA
WP_149349795.1\|607277_608003_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_149349797.1\|608005_609010_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_149349799.1\|609083_610163_+	class C sortase	NA	NA	NA	NA
WP_003597456.1\|610633_611032_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_003582804.1\|611155_611371_-	hypothetical protein	NA	NA	NA	NA
WP_080595779.1\|611569_611848_-	AP2 domain-containing protein	A0A0F6TI53	Escherichia_coli_O157_typing_phage	2.7e-06	53.1
WP_149349803.1\|612107_612392_-	cytosolic protein	NA	NA	NA	NA
WP_002826718.1\|612397_613048_-	recombinase family protein	M9Q1K0	Clostridium_phage	1.5e-18	37.6
WP_003582572.1\|613123_613492_-	YxeA family protein	NA	NA	NA	NA
WP_016387184.1\|613786_614137_-	hypothetical protein	NA	NA	NA	NA
WP_003582565.1\|614431_614899_-	DNA starvation/stationary phase protection protein	A0A222Z0F3	Streptomyces_phage	1.6e-06	29.2
WP_108315962.1\|615112_615391_+\|transposase	transposase	Q6J1X3	Lactobacillus_phage	3.9e-29	94.3
WP_149349805.1\|615444_616287_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	1.5e-153	97.5
WP_016374492.1\|616514_617075_+	hypothetical protein	NA	NA	NA	NA
WP_002816285.1\|617338_617590_+\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	9.2e-38	96.4
WP_052915964.1\|617643_618486_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.3e-156	98.9
WP_003582354.1\|618797_619715_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_003582352.1\|619861_620470_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.4e-50	52.8
WP_003582350.1\|620480_621749_+	NADPH-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.2e-50	48.2

DBSCAN-SWA_4

1153179 : 1225039

Lactobacillus_phage(71.7%)

tail,capsid,integrase,terminase,head,transposase,holin,portal

attL 1164849:1164864|attR 1211894:1211909

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149349876.1\|1153179_1154424_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	1.5e-11	22.6
WP_003569846.1\|1154616_1156065_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_003569847.1\|1156145_1157999_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_149349878.1\|1158086_1158917_-	PRD domain-containing protein	NA	NA	NA	NA
WP_149349691.1\|1159254_1160670_-\|transposase	IS5-like element ISLca2 family transposase	NA	NA	NA	NA
WP_149349880.1\|1161151_1163815_-	YfhO family protein	NA	NA	NA	NA
WP_149349882.1\|1164124_1165864_+	YfhO family protein	NA	NA	NA	NA
1164849:1164864	attL	NA	NA	NA	NA
WP_003569858.1\|1166215_1167145_-	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	6.0e-74	48.1
WP_003606991.1\|1167231_1167870_-	YkyA family protein	NA	NA	NA	NA
WP_149349884.1\|1167997_1168963_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_003569868.1\|1169026_1169239_+	hypothetical protein	NA	NA	NA	NA
WP_003566521.1\|1169922_1170123_+	cold-shock protein	Q9AZD3	Lactococcus_phage	1.2e-19	66.2
WP_003569870.1\|1170364_1170847_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_172623748.1\|1170846_1171488_+	glycoside hydrolase family 73 protein	A0A0A7RUS8	Clostridium_phage	2.5e-26	47.0
WP_003566514.1\|1171678_1172257_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_003566511.1\|1172263_1173592_+	purine permease	Q9KX94	Enterobacteria_phage	1.6e-35	31.7
WP_003569875.1\|1173612_1174722_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_003566506.1\|1174791_1176087_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	4.2e-17	32.8
WP_003566504.1\|1176208_1176778_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_003585070.1\|1176787_1177534_-	hypothetical protein	NA	NA	NA	NA
WP_149349888.1\|1177619_1179875_-	sulfatase-like hydrolase/transferase	W6LM83	Streptococcus_phage	4.3e-158	44.9
WP_003569888.1\|1180340_1180946_+	VanZ family protein	NA	NA	NA	NA
WP_003566496.1\|1181117_1181975_+	glucose transporter GlcU	NA	NA	NA	NA
WP_003566494.1\|1182188_1183529_+	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_081528605.1\|1183654_1184839_-\|integrase	site-specific integrase	A0A0P0I3D2	Lactobacillus_phage	7.3e-226	99.2
WP_060611504.1\|1184928_1185132_-	hypothetical protein	A0A0P0IQK8	Lactobacillus_phage	5.5e-33	97.0
WP_087911959.1\|1185155_1185581_-	pyridoxamine 5'-phosphate oxidase family protein	A0A0P0I7K6	Lactobacillus_phage	2.7e-61	86.5
WP_081528604.1\|1185717_1185876_+	hypothetical protein	NA	NA	NA	NA
WP_149349891.1\|1185849_1186626_-	DUF4393 domain-containing protein	NA	NA	NA	NA
WP_149349893.1\|1186678_1188022_-	DUF4041 domain-containing protein	A0A1B0Y697	Lactobacillus_phage	3.5e-192	96.6
WP_049181926.1\|1188111_1188462_-	hypothetical protein	A0A1B0Y4P2	Lactobacillus_phage	4.0e-55	95.7
WP_149349896.1\|1188541_1189345_-	SHOCT domain-containing protein	NA	NA	NA	NA
WP_081528599.1\|1189390_1189837_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_003607004.1\|1189837_1190269_-	helix-turn-helix transcriptional regulator	A0A2P1JU09	Anoxybacillus_phage	9.4e-22	39.9
WP_149349898.1\|1190404_1190647_+	helix-turn-helix domain-containing protein	A0A059T7X5	Listeria_phage	2.7e-10	54.4
WP_081528597.1\|1191040_1191724_-	hypothetical protein	A0A1L2JZ52	Aeribacillus_phage	2.0e-05	25.1
WP_081528873.1\|1191720_1191954_-	helix-turn-helix transcriptional regulator	A0A0K2CNE2	Brevibacillus_phage	2.4e-08	34.2
WP_081528596.1\|1192099_1192303_+	helix-turn-helix transcriptional regulator	J7I4M9	Acinetobacter_phage	3.1e-07	47.5
WP_081528595.1\|1192302_1192650_+	hypothetical protein	NA	NA	NA	NA
WP_149349900.1\|1192642_1193368_+	antA/AntB antirepressor family protein	U5U413	Lactobacillus_phage	5.1e-44	53.2
WP_060417208.1\|1193433_1193982_+	hypothetical protein	A0A1B0YE60	Lactobacillus_phage	4.1e-99	98.9
WP_003594176.1\|1193960_1194182_+	helix-turn-helix domain-containing protein	A0A1B0Y6A3	Lactobacillus_phage	1.8e-37	100.0
WP_003594180.1\|1194422_1194830_+	hypothetical protein	A0A0P0IXE5	Lactobacillus_phage	1.2e-74	98.5
WP_016380253.1\|1195685_1196486_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A0P0IZH9	Lactobacillus_phage	9.5e-145	93.6
WP_003585036.1\|1196501_1197353_+	DnaD domain protein	A0A1B0Y2R2	Lactobacillus_phage	3.2e-106	97.0
WP_003585034.1\|1197339_1198122_+	ATP-binding protein	Q6J1V5	Lactobacillus_phage	1.1e-132	91.9
WP_003595416.1\|1198118_1198451_+	hypothetical protein	Q6J1V4	Lactobacillus_phage	1.5e-40	79.1
WP_060417213.1\|1198447_1198897_+	hypothetical protein	A0A0P0ID70	Lactobacillus_phage	1.3e-71	98.7
WP_019892351.1\|1198943_1199198_+	hypothetical protein	A0A0P0IQP0	Lactobacillus_phage	5.9e-40	98.8
WP_019892349.1\|1199194_1199560_+	hypothetical protein	A0A0P0HRU0	Lactobacillus_phage	6.9e-66	99.2
WP_003605864.1\|1199839_1199998_+	hypothetical protein	A8YQM9	Lactobacillus_phage	4.2e-20	90.4
WP_003595403.1\|1200104_1200365_+	hypothetical protein	C1KFT6	Lactobacillus_virus	3.8e-34	86.0
WP_012491447.1\|1200506_1200704_+	hypothetical protein	A0A1B0Y850	Lactobacillus_phage	2.8e-29	100.0
WP_071253136.1\|1200878_1201307_+	transcriptional regulator	NA	NA	NA	NA
WP_016375957.1\|1201661_1202285_+	hypothetical protein	NA	NA	NA	NA
WP_071252591.1\|1202745_1203894_+	hypothetical protein	A0A0P0I3G0	Lactobacillus_phage	4.9e-219	96.9
WP_016368861.1\|1204279_1204969_+	helix-turn-helix domain-containing protein	A0A1S5SAA7	Streptococcus_phage	8.2e-44	48.9
WP_052915997.1\|1204952_1206206_+\|terminase	PBSX family phage terminase large subunit	A0A0P0I3B0	Lactobacillus_phage	1.1e-248	99.0
WP_149349902.1\|1206210_1207638_+\|portal	phage portal protein	A0A0P0IJV3	Lactobacillus_phage	6.5e-253	93.5
WP_128529962.1\|1207603_1208602_+\|capsid	minor capsid protein	A0A0P0ID43	Lactobacillus_phage	1.0e-180	97.6
WP_128529949.1\|1208614_1208839_+	hypothetical protein	A0A142F064	Stenotrophomonas_phage	6.8e-08	45.5
WP_128529950.1\|1208835_1209159_+	hypothetical protein	A0A0P0IJR5	Lactobacillus_phage	2.6e-24	60.6
WP_128529951.1\|1209155_1209590_+	hypothetical protein	NA	NA	NA	NA
WP_128529952.1\|1209731_1210373_+	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	4.7e-78	85.9
WP_016386769.1\|1210385_1210700_+	hypothetical protein	A0A0P0IJQ8	Lactobacillus_phage	5.9e-50	98.1
WP_149349905.1\|1210713_1211733_+\|capsid	major capsid protein	A0A0P0IZJ7	Lactobacillus_phage	6.0e-184	95.6
WP_080600005.1\|1211747_1211999_+	Ig-like domain-containing protein	NA	NA	NA	NA
1211894:1211909	attR	NA	NA	NA	NA
WP_003575585.1\|1212068_1212443_+\|head,tail	phage head-tail connector protein	A0A0P0IZF6	Lactobacillus_phage	4.0e-61	94.4
WP_003575583.1\|1212447_1212750_+	hypothetical protein	A0A0N7IR97	Lactobacillus_phage	1.1e-48	93.0
WP_149349907.1\|1212746_1213112_+\|tail	phage tail protein	A0A0P0I3G7	Lactobacillus_phage	4.5e-57	95.0
WP_003575579.1\|1213112_1213517_+	DUF3168 domain-containing protein	A0A0P0I3C8	Lactobacillus_phage	3.0e-70	98.5
WP_003575577.1\|1213528_1214128_+\|tail	phage tail protein	A0A0N7IR90	Lactobacillus_phage	3.1e-100	96.5
WP_003575575.1\|1214265_1214598_+	hypothetical protein	A0A0P0IQQ6	Lactobacillus_phage	7.9e-53	100.0
WP_016380685.1\|1214702_1215056_+	hypothetical protein	A0A0P0I7N9	Lactobacillus_phage	1.8e-55	96.6
WP_128529953.1\|1215048_1218138_+	tape measure protein	A0A0N7IR83	Lactobacillus_phage	4.5e-267	91.9
WP_128529954.1\|1218140_1220294_+\|tail	phage tail family protein	A0A0P0IZA1	Lactobacillus_phage	1.9e-235	59.5
WP_081528585.1\|1223880_1224156_+	hypothetical protein	NA	NA	NA	NA
WP_032779081.1\|1224148_1224280_+	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	4.0e-08	60.5
WP_003587703.1\|1224335_1224611_+	hypothetical protein	A0A0P0IZF9	Lactobacillus_phage	6.3e-48	98.9
WP_128529955.1\|1224625_1225039_+\|holin	phage holin	A0A0P0IDC6	Lactobacillus_phage	2.6e-45	92.3

DBSCAN-SWA_5

1503820 : 1515407

Streptococcus_phage(33.33%)

integrase

attL 1506881:1506895|attR 1521636:1521650

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149349955.1\|1503820_1506568_+	hypothetical protein	A0A1B1IUG5	uncultured_Mediterranean_phage	4.8e-10	39.2
WP_172623750.1\|1506637_1507180_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
1506881:1506895	attL	NA	NA	NA	NA
WP_149349959.1\|1507570_1508815_+	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	1.2e-82	43.5
WP_149349961.1\|1508896_1509145_+	DNA-binding protein	Q9AZF3	Lactococcus_phage	6.4e-15	54.2
WP_149349963.1\|1509221_1510460_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9I6A9	Streptococcus_phage	1.5e-19	27.1
WP_003570328.1\|1510573_1511434_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003570330.1\|1511417_1512176_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.3e-21	37.1
WP_003570332.1\|1512237_1513053_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_149349965.1\|1513322_1515407_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	4.3e-104	37.7
1521636:1521650	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2389311 : 2444072

unidentified_phage(20.0%)

tRNA,protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149350228.1\|2389311_2390556_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	4.3e-11	22.4
WP_016367259.1\|2390641_2391475_-	hypothetical protein	NA	NA	NA	NA
WP_003580718.1\|2391467_2391998_-	DUF3278 domain-containing protein	NA	NA	NA	NA
WP_003580720.1\|2392254_2393460_+	MFS transporter	NA	NA	NA	NA
WP_003567153.1\|2395091_2395781_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_003567155.1\|2395880_2396306_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_149350232.1\|2396598_2399229_-	magnesium-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	5.7e-45	25.7
WP_003585484.1\|2399491_2400955_+	amidase	NA	NA	NA	NA
WP_003567161.1\|2400954_2401323_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_003580729.1\|2401411_2401948_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_003580731.1\|2401922_2402495_-	ECF transporter S component	NA	NA	NA	NA
WP_003567167.1\|2402491_2402878_-	DUF4430 domain-containing protein	NA	NA	NA	NA
WP_149350236.1\|2402899_2405146_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	A0A2K9VI66	Mycobacterium_phage	2.0e-86	33.3
WP_003580735.1\|2405337_2405781_-	nucleoside 2-deoxyribosyltransferase	K4I206	Lactobacillus_phage	1.9e-09	28.1
WP_003580738.1\|2405818_2406664_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003567176.1\|2406673_2407228_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	2.9e-07	27.1
WP_003567177.1\|2407331_2407502_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_003661828.1\|2407521_2407674_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_149350240.1\|2408040_2409000_-	UbiA family prenyltransferase	NA	NA	NA	NA
WP_003580744.1\|2408996_2409935_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_149350244.1\|2409946_2411014_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_149350247.1\|2411190_2412105_-	FMN-binding protein	NA	NA	NA	NA
WP_003567189.1\|2412391_2414290_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003576171.1\|2414464_2414908_+	NusG domain II-containing protein	NA	NA	NA	NA
WP_003567195.1\|2414904_2415492_+	Gx transporter family protein	NA	NA	NA	NA
WP_003571366.1\|2415466_2416444_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	6.2e-05	23.2
WP_003580748.1\|2417134_2417377_-	hypothetical protein	NA	NA	NA	NA
WP_016366768.1\|2417551_2418235_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_003580753.1\|2418231_2419287_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_003580755.1\|2419605_2420481_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-20	30.9
WP_003580758.1\|2420482_2421715_-	hypothetical protein	NA	NA	NA	NA
WP_003580760.1\|2421707_2422820_-	hypothetical protein	NA	NA	NA	NA
WP_003574021.1\|2423243_2424164_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003580764.1\|2424773_2425658_+	MutR family positive transcriptional regulator	NA	NA	NA	NA
WP_003576196.1\|2425775_2426315_-	NYN domain-containing protein	NA	NA	NA	NA
WP_003567217.1\|2426315_2427095_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_003567219.1\|2427066_2427495_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_016366615.1\|2427491_2428898_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	2.0e-52	30.6
WP_003580769.1\|2429290_2430685_-	FAD-binding protein	NA	NA	NA	NA
WP_003580771.1\|2430810_2431398_-	hypothetical protein	NA	NA	NA	NA
WP_003580773.1\|2431397_2431589_-	hypothetical protein	NA	NA	NA	NA
WP_003576207.1\|2432064_2433558_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_003580775.1\|2433705_2434686_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_149350251.1\|2434801_2435473_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA
WP_003567235.1\|2435656_2436487_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_003577825.1\|2436632_2437472_-\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_003577828.1\|2437484_2438501_-	membrane protein	NA	NA	NA	NA
WP_003567242.1\|2438507_2438882_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_149350255.1\|2439046_2440318_-	MucBP domain-containing protein	NA	NA	NA	NA
WP_003574021.1\|2441687_2442608_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003577835.1\|2443804_2443918_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_080596037.1\|2443961_2444072_-\|bacteriocin	bacteriocin	NA	NA	NA	NA

DBSCAN-SWA_7

2484361 : 2505206

Bacillus_phage(66.67%)

protease,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003574021.1\|2484361_2485282_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_149350259.1\|2485352_2486498_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003585559.1\|2486706_2487762_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003580838.1\|2488032_2488680_+	helix-turn-helix transcriptional regulator	A0A0S2MVM8	Bacillus_phage	1.7e-06	37.5
WP_003567322.1\|2488815_2489145_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003580841.1\|2489141_2489930_+	hypothetical protein	NA	NA	NA	NA
WP_003580842.1\|2489982_2490771_+	hypothetical protein	NA	NA	NA	NA
WP_003567328.1\|2490815_2491094_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580845.1\|2491117_2491402_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580847.1\|2491594_2491891_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567335.1\|2491992_2493348_-	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003580849.1\|2493653_2493965_-	hypothetical protein	NA	NA	NA	NA
WP_003567340.1\|2494037_2494388_-	hypothetical protein	NA	NA	NA	NA
WP_003585563.1\|2494561_2495941_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_149350261.1\|2495951_2498144_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.1e-36	26.7
WP_003571414.1\|2498609_2498747_-	hypothetical protein	NA	NA	NA	NA
WP_003580853.1\|2498936_2500235_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_003567351.1\|2500239_2501046_+	response regulator transcription factor	NA	NA	NA	NA
WP_016383118.1\|2501407_2501605_-	hypothetical protein	NA	NA	NA	NA
WP_003580868.1\|2502151_2502391_+	hypothetical protein	NA	NA	NA	NA
WP_032675994.1\|2502650_2502824_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003567358.1\|2502858_2503047_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_003567359.1\|2503368_2503593_+	hypothetical protein	NA	NA	NA	NA
WP_172623758.1\|2504393_2505206_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP031786

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP031785

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection