CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP032155	Mycobacterium sp. ELW1 chromosome, complete genome	11 crisprs	cas3,WYL,csa3,DinG,DEDDh,cas4	1	1	3	0
NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	0 crisprs	csa3	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP032155_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_1

293082-293304

Orphan

Consensus_repeat	Method
CCCGCACCGCCGGCGCCGCCGTTGCCG	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP032155_1

>merge|NZ_CP032155|1|293082-293304|CRISPRCasFinder
CCGCGTCCGCCGTTACCGCCATTGCCGCCGCGGTCGGTCGCGTTGAGCCCCTTGGCGGGACTGTCGCCGCCGGCACCGCCGTCACCGCCAAAAGCGAAGAGGGAGAACAGGCCGCCGTTGCCGCCGTTGCCGCCGCGGCCACCGATGCTGGCCGCGCCGCCGGCGCCACCCTCGCCACCGCTGGCGCCGCCGCTGGCCCCGCCGCCTTCGCCGCCGTCACCGG

>NZ_CP032155|1|1|293082-293304|CRISPRCasFinder
CCGCGTCCGCCGTTACCGCCATTGCCG	CCGCGGTCGGTCGCGTTGAGCCCCTTGGCGGGA
CTGTCGCCGCCGGCACCGCCGTCACCG	CCAAAAGCGAAGAGGGAG
AACAGGCCGCCGTTGCCGCCGTTGCCG	CCGCGGCCACCGATGCTG
GCCGCGCCGCCGGCGCCACCCTCGCCA	CCGCTGGCGCCGCCGCTG
GCCCCGCCGCCTTCGCCGCCGTCACCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149383279.1\|308824_309697_+\|DUF4436-family-protein	unknown	unknown	gnl\|CDD\|379624
NZ_CP032155.1\|WP_149377546.1\|303547_304330_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP032155.1\|WP_149377540.1\|288044_289373_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP032155.1\|WP_149377538.1\|286939_287311_+\|hemophore-related-protein	unknown	unknown	gnl\|CDD\|374603
NZ_CP032155.1\|WP_149383278.1\|302850_303540_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_CP032155.1\|WP_149377549.1\|309749_311282_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236215
NZ_CP032155.1\|WP_149377548.1\|306913_308740_+\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP032155.1\|WP_149377541.1\|289369_289747_-\|DUF3054-family-protein	unknown	unknown	gnl\|CDD\|378616
NZ_CP032155.1\|WP_168215018.1\|287368_288037_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP032155.1\|WP_149377550.1\|311282_312221_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NZ_CP032155.1\|WP_149377534.1\|281419_282109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377545.1\|299792_302801_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP032155.1\|WP_149377544.1\|295798_299311_-\|cadherin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|380078
NZ_CP032155.1\|WP_149377537.1\|286224_286773_+\|hemophore	unknown	unknown	gnl\|CDD\|275323
NZ_CP032155.1\|WP_149377543.1\|294580_295735_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|279875
NZ_CP032155.1\|WP_149377533.1\|280835_281423_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377536.1\|282519_283014_-\|XRE-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377535.1\|282095_282515_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP032155.1\|WP_149377547.1\|305327_306761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_168215019.1\|289772_290930_-\|UPF0104-family-protein	unknown	unknown	gnl\|CDD\|223469

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149377546.1\|303547_304330_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	3.42525e-89
NZ_CP032155.1\|WP_149377540.1\|288044_289373_+\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.42499e-41
NZ_CP032155.1\|WP_149377538.1\|286939_287311_+\|hemophore-related-protein	gnl\|CDD\|374603	pfam16525, MHB, Haemophore, haem-binding. MHB is a coiled-coil molecule that binds free haem in mycobacterial cytoplasm to deliver it to membrane proteins for shuttling through the membrane.	3.05502e-38
NZ_CP032155.1\|WP_149383278.1\|302850_303540_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	0.000469148
NZ_CP032155.1\|WP_149377549.1\|309749_311282_+\|AMP-binding-protein	gnl\|CDD\|236215	PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP032155.1\|WP_149377548.1\|306913_308740_+\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP032155.1\|WP_149377541.1\|289369_289747_-\|DUF3054-family-protein	gnl\|CDD\|378616	pfam11255, DUF3054, Protein of unknown function (DUF3054). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.38936e-25
NZ_CP032155.1\|WP_168215018.1\|287368_288037_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.77607e-80
NZ_CP032155.1\|WP_149377550.1\|311282_312221_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	4.38651e-43
NZ_CP032155.1\|WP_149377545.1\|299792_302801_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	2.73748e-130
NZ_CP032155.1\|WP_149377544.1\|295798_299311_-\|cadherin-like-domain-containing-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	7.12733e-16
NZ_CP032155.1\|WP_149377537.1\|286224_286773_+\|hemophore	gnl\|CDD\|275323	TIGR04530, hemophoreRv0203, hemophore, mycobacterial-type. Members of this family, including Rv0203 from Mycobacterium tuberculosis, are secreted heme-binding proteins used in heme acquisition. Such proteins are called hemophores. Members have a cleavable N-terminal signal peptide, and a mature region just over 100 amino acids long with a pair of invariant Cys residues. An unrelated hemophore, HasA, occurs in Gram-negative pathogens such as Yersinia pestis. [Transport and binding proteins, Other].	4.79512e-37
NZ_CP032155.1\|WP_149377543.1\|294580_295735_+\|AI-2E-family-transporter	gnl\|CDD\|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	2.06105e-61
NZ_CP032155.1\|WP_149383279.1\|308824_309697_+\|DUF4436-family-protein	gnl\|CDD\|379624	pfam14494, DUF4436, Domain of unknown function (DUF4436). This is a family of membrane and transmembrane proteins from mycobacterial and related species. The function is not known.	8.63531e-84
NZ_CP032155.1\|WP_149377535.1\|282095_282515_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.34534e-46
NZ_CP032155.1\|WP_168215019.1\|289772_290930_-\|UPF0104-family-protein	gnl\|CDD\|223469	COG0392, COG0392, Predicted integral membrane protein [Function unknown].	1.433e-40

>NZ_CP032155.1|WP_168215019.1|289772_290930_-|UPF0104-family-protein
MNAAREDHGPPARGKYWWVRWAVLGVALIVLVVEATLVWDQLAKAWRSLFSANGWWVLAAVAAAMLSMHSFAQIQRTLLRSAGVVVRQWRSEAAFYAGNALSTTMPGGPVLSATFVYRQQRLWGASPVVASWQLVMSGALQVVGLALLGLGGAFLLGAKNNPFSLLFTLGGFIALLLLAQAVATRPELIDGIGVKVLGWVNSVRGKPTDTGLRRWRETLNQLESVSLSRRTLGVAFGWSFFNWVCDVACLAFAAYATGGRPSLAGLTVAYAAARAVGSIPLMPGGLLVVEAVLVPGLVSSGMALPGAISAMLIYRLVSWIFISTIGWVVFFFLFRTEGPLDPDAVADEIAAAEAESGGAPVDDPADTALQGPVPPPCPDPDDDKP
>NZ_CP032155.1|WP_149377541.1|289369_289747_-|DUF3054-family-protein
MAVRSDTRPAALALAGDIVSVVVFCAIGRRSHAEGLTLAGIAETAWPFLSGTLAGWLISRAWRAPTAIAPTGVIVWLSTIVVGMLLRKASSQGVAVSFIIVASVVTAVLLLGWRGVAAVVRKRRG
>NZ_CP032155.1|WP_149377540.1|288044_289373_+|HAMP-domain-containing-protein
MSSLGQSLSLRSRVALAAAVAAAIVVALLAALTSVVLANNDEAQLDKRLDSIVDASMYPEQLRDPSRVVTTGRSRSTGQVMFQRGFQLPPLPPGTATVTVNNVDYRVRTVNVDQSGGILVSIGIRADSILLSRARIPLYVLIVCLAVMVALALGWILAGPAIRPLLKLTEQTRRLGTGHDRLDPVHGSREAEDLSEAMIAMLNRLADAQAATTNSLQAAQDFAANAAHELRTPLTAMRADLDTLRIHDLPPEEREEVVADLARAQRRVEAIITALGQLASGQLARAEDREPIDVAEMLDRVARENIRSGVGEIIVEADEAGTVWGWPAGLRLAVDNLVRNAITHGEATRIVLRARRQGPLLAITVDDNGRGLPAEEHRKVLGRFARGSTATAGGSGLGLALVAQQAALHGGDIELSDGPLGGLRAVLTVSTAPEPVAPAGQA
>NZ_CP032155.1|WP_168215018.1|287368_288037_+|response-regulator-transcription-factor
MVDDDPDVRTSVARGLRHSGFDVRVAATGKEALRLLANENHDALVLDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRASHSHEGSDAVTIGGLTIDTARRLVFVNGDRVELTKREFDLLAVLAENSGVVLSRQRLLELVWGYDFDVDTNVADVFISYLRRKLEREGVPRVIHTVRGIGYVLRSEP
>NZ_CP032155.1|WP_149377538.1|286939_287311_+|hemophore-related-protein
MLLNARLARRAVVGAIGTGAVAGAMLIGAAPSALADPPPNCTAADLAGVAAGVSAATSAYLFTHPDVNAFFTGLEGAPRDTIRSEVKQYLDYNPSVKADLQGIRQPLVDLKNRCGTSPDVPVS
>NZ_CP032155.1|WP_149377537.1|286224_286773_+|hemophore
MSASTISATAGLRRGVCAVLAATAAGGAALLALSTSVSMSEATAAPDPCAASQIAKTVGTVATNTGTYLDAHPQTNQALTTISQQQAGPQTVVALKSYFDANPAAAKDLQAIQQPLTSMSAQCKLPVSLPQLLGLLQSAQTGGLPAPAPGASTGTTPAQQLSGSQAPLGNGPLPGPATIGTR
>NZ_CP032155.1|WP_149377536.1|282519_283014_-|XRE-family-transcriptional-regulator
MTVAAQRDAVPAPAAQSFIDSRPVEFWPTASIREALESGDITVWQRIVMAIKRDPYGRTARQVEEVLEHSQPYGISKALAEVLLRARSHLEANERAEAARHVRLLLDRSGLAEQEFASRIGVAQSDLVSYLDATVSPPASLMIRMRRLSDRFAKMRAQRASGGD
>NZ_CP032155.1|WP_149377535.1|282095_282515_-|CoA-binding-protein
MTPDSAELEQILRDTRTVAVVGASDNPARPSYDVYRYLARFSDFELYPVNPNISDIDGARVYPSLAELPVVPDMVDVFRRYDDLPGVLADTLALSPHPKCLWLQQGLWHDEVAEQARAAGLRVVMDRCLKVDYARLIGR
>NZ_CP032155.1|WP_149377534.1|281419_282109_+|hypothetical-protein
MRNLARVLAFDIVAPLAAIAALLAIGVVLGWPLWWVAVCSMLCLLIVEGVIVNVVLFRRDSVTVGTDDDGPGLRLAVVALATTALVATVVVGYTQWTLPDRDFTRDSAEVVRIATAASEATATFTPADPMSSIDRAATFMAPDRADAFKNEFGKSTSDLAKKNISATAQTISAGLEALGPTAASVAVVMRGTQSQPGQQPSTAVLALRVSLAKQDGRWLVLDISPINAR
>NZ_CP032155.1|WP_149377533.1|280835_281423_+|hypothetical-protein
MPEAEPTDDGADDRTFTGYGVASAVLGVVAVAAVVLGALIWSGHHDAADERAYQSKVMSAAANWTSVLINMNVDNVDASLAKLHDGTAGQLNSDFEAAIKPYREVVRTLQARTTGQIESVSFEAVHHNLNVQPGQAPQAPALPPELANRTDSVLVIATSVSENSGNKPTTVRWNLRLGVSDVDGKLMISRLESLR
>NZ_CP032155.1|WP_149377543.1|294580_295735_+|AI-2E-family-transporter
MPATRVSDDDSVDPFLRKTAAWSWRLLVVGAAIVALLWVVSRLEVIVVPVALATMLAALLLPAVDWLDRRGAPRGGAVALILLGGFAIFGGILTFVVSQFVSGLPGLVEQVTYSIDGLRRWLVDGPAHLSREQIDNAGNTAIKALRDNQEQLTTGALSTAATLTELVTGALLVLFTLIFLLHGGRNIYSFVTKIVPSSARERVRDAGRAGFGSLIGYVRATALVALVDAVGIGTGLAIMGIPLALPLASLVFLGAFIPLVGAVVTGFLAVVVALLAKGVVYGLITLGLIIAVQQLEAHILQPLVMGRAVSIHPLAIVLAISAGAVLAGIVGALLSVPLVAFLNSAIRVLVADNPAEEAAELEENDDGIILNAEPDVVPPKREKD
>NZ_CP032155.1|WP_149377544.1|295798_299311_-|cadherin-like-domain-containing-protein
MKSKRPVAVASKPSGGQTPDAPSAEVLAAALATTTRRDTATASAVAAAVANSPAEIAREKAVADINMSVGWVPGVGTVVNGISLVSDFVDFTKAALRGDAVDMRDEIGDMTLDLVGMIPVVGAPVAATIHRSTVPVNRAPRPVDDSYSVDQDTQLTGNVLTNDSHPGGDSMTAVVSTAPSHGSLTLNTDGSFVYTPAAGYSGADSFSYTVTDTKGANAIGNVTIAVKYVAPPPVVDQQHPYTIDATDPATGTISGHFNVTHDKPFTYHVVNAPDATLGSFELNEQTGEWTFTPNPRTRVLAGTLGPTSPAAVKLSFSATATDGMATTAPIVVTEHIAGADRAALSLPPGTMPVLSFVDSRTGNAYIFGYRGNLIDGPDDQSVSYLAAVIHADGTSSIPSGASPVSGLVREAFAVGDTTFVVSQTGGDESSFQTYLSILGSDGLTPLGEPIPGDFRQPLTVAGTTYLLTQTGTYESGYQTHLTRLRADGVTSTTEMPGAFYGRTIVIGETTYLVTDTGTYESGYRTQLTTLGADGATSTTSVPGRFSNHTLVVGDTTYLVTVNGSQQSGYQTHLTRLGPDGVTSTTSIPGQFYEDSSGYSVVAGDITYLVTQTGDYDSGYNTHVTEVRTEGVSPTTTIPGWSWGGPTLVGDTRYLLVPTQSGTATHVVALTPDGATSVGSIPGVLSGDPIVVGDTTYFISHIGDSGVAATWQSVVTTLAPTPGGVTVIDDPIPGYRWAMRPIVVSDTTYLVTETWNSSVGYETHLTALLPDGVAPLGLATLGTVSGNPTVVVAGETTCLITTVRYYWLSDGTYAYTRTLLTAVEPEGLTLWEDPLHGYPGVAPITIGDTTYLVLETDDPTSGYQLQLLSVTAGGVRAIGAPTSGRVNSHSDFDTVVVGDTTYLIVETSDAAGGQQTSLVKVGPGGLTAVPGSLPGHPISAPVVVGDTTYLVTQTGQYDSAQTHFTALDPQGVLQPAYTVSGTLAYEPLIVAGDLIYVKTDGWETTGEGSHSTNHVYVTALAPEGPSSVDYPVQYGEPAIVVGNTTYLMSTVFPDEFVTGTDTTKTYIVALTPHGAVQFAEPVRGYSPGPIVAGDTLYLEFASYPDDVDDADDVTTYLVTLTPDGPVFAEPFPGLAPFYMDPIFTLGDTTYVTTTSGVWAIGVDAPSPASRL
>NZ_CP032155.1|WP_149377545.1|299792_302801_-|MMPL-family-transporter
MFAWWGRTVYRYRYIVIAVMVGLCLGGAVYGASLGKHVTQSGFYDNGSESVRASTLADEVYGRDRTSHVVAILTPPGDEKVTDKNWQKTVTEELDQVVKDHPDQIVGWVGWLKAPDTTDPTVNQMKTADLRHTFISIPLKGDDDDTILKNYQTIEPALKKVNGGTIQLAGLNPLASELTGTIGTDQQRAELAIVPLVAVVLFFVFGGAVAAALPAIIGGLTIGGALGILRLTAEFGPVHFFAQPVVTMMGFGIAIDYGLFVVSRFREELAEGYDVEAAVRRSVMTSGRTVAFSSVIIVASSLPLLLIPLGFLRSITYAIIASVLLAAFLSITVLPAVLGILGANVDALGVRTLLRVPFLANWSFSRRIIDWFIEKTQKTKTREEVEKGFWGRLVNVVMKRPIAFAAPIVIIMTLLIIPMGQLALGGLSEKYLPPDNPVRSAQEQFDKEFSSFRTEPLTLVIKTNNGSPVTDQQLDDLRAEAQTVSGFAGSDDPSKMWEERSAQNGGSKDPSVRVLQNGLIDSSTAPQKIEQLRALTPPRGTTVLVGGTQALAQDSILTLFDKLPLMVLILVLTTTVLMFLAFGSVVLPIKAALMSALTLGSTMGILTWMFVEGGHGSGLLNYTPQPLFAPMIGLIIAVIWGLSTDYEVFLVSRMVEARERGLSTAEAIRIGTATTGRLITGAALVLAVVVAAFAFSDLVVMKYLAFGLLIALLLDATVIRMFLVPAIMKLLGDDCWWAPRWMKRLQVKIGLGETHLTDERKRPVVRETDSALVGAGAPVSAAEARRPAHDPTHPVEGRAMPRVVGRAEYRNPPPPQEAPSAAGTARMPDPVEAGTEAPTTRFSVAKNAVKNAVNTAASAAKTNRPPTPPAPDREIESWLGELRGSGGQERSDRGSMQPGSTPTPTPPSPPSAQPTQAMSAPEDATTAIPAQHDRTGGDDVSPAISAEETRAIPVSRPDQGDSEVATEKLNSRGKKEGDDRPRRGGGAGGVSAADLLRREGRL
>NZ_CP032155.1|WP_149383278.1|302850_303540_-|NYN-domain-containing-protein
MSVIDDATAPALPDSGEQPVSPPIQRVLLVWDAPNLDMGLGSILGGRPTAAHRPRFDALGRWLLARTAELSAGHPEVPVEPEATVFTNIAPGSADVVRPWVEALRNVGFAVFAKPKIDEDSDVDSDMLAHIELRRTEGLAAVLVASADGQAFRAPLEEIAKAGTPAYVLGFREHASWALASDTLEFVDLEDIPGVFREPLPRIGLDSLPEQGAWLQPFRPLSSLLTSRV
>NZ_CP032155.1|WP_149377546.1|303547_304330_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSDHGQMHAQRHGGSATPDVWPAHPYPRITSFRSRRSTLTEAQQDAWDRLWPEMGTQAREGEKPAGLLDTTAWFGRQAPVVLEIGCGTGTSTLAMAMAEPDIDVVAVEVYKRGLAQLLSAVGREGVPNIRLVRGDAVDVLENMFGPGSLTGVRVFFPDPWPKSRHHKRRLLQPNTISLIADRLRPGGVLHAATDHAGYAEQIAEAGDAEPLLRRIQPGDELPISVKRPRTKYETKAAEAGSAVAELLWLKRPSVVERDRG
>NZ_CP032155.1|WP_149377547.1|305327_306761_+|hypothetical-protein
MTDPVDSLVSQLDPSLPMPSIVRRDVVLVAGPWLSGTSSVVTALRERLPDHAVVETDELAAGQAPAAVVFVVSATASLTESDCALLDFVTADTDAVLGVVAKIDVYRTWRDVLAADRALVEQRAPRYRDMPWVGAAAAPDLGEPVVDELVTALREILADDTRDRRNHLRAMENRLLTVHRRLELDVAGAGREARLAALRVQRTSAVHRYRVDKSQRSIALRARIQQARLELTYFARNRCASVRTELQEDVAGLSRRSLPRFPDEVRRRAEEVADDVAAGVTRQLADVGEELGLAVEPVESRPEVEVGAAPPRARGAETRLMLLLGGGFGAGVALTLSRLFAELAPQWTVGGGIAGAVIGVALTLWVVGVRGLLHDRAILDRWVAEVLGRQRTALEEWVATHMLGAEASLGCVAAERDAADRARTEDTVARIDREIREHATASARAVVLRDRQAPAIERALAAVRDELDALHTAKQAN
>NZ_CP032155.1|WP_149377548.1|306913_308740_+|phosphoenolpyruvate-carboxykinase-(GTP)
MTSATIPGLDNAPTKHQGLLAWVQEVAELTQPDRVVFADGSEEEYQRLCDELVAAGTFTKLSDSEEPSSYLARSAPSDVARVESRTFICSEREIDAGPTNNWMDPAEMRGLMTELYRGSMRGRTMYVVPFCMGPLGADDPKLGVEITDSEYVVVSMRTMTRMGKAALEKIGDDGFFVKALHSLGAPLAPGEEDVPWPCNDTKYITHFPETREIWSFGSGYGGNALLGKKCYSLRIASAMAHDEGWLAEHMLILKLISPENKSYFVAAAFPSACGKTNLAMLQPTIPGWRAETVGDDIAWMRFGKDGRLYATNPEFGFFGVAPGTNWSSNPNAMKTVAAGNTVFTNVALTDDGGVWWEGLEGDPQHLIDWKGNDWEAGSSEKAAHPNSRYCTPMSQCPTLAPEWDDPQGVPISAILFGGRRKTTVPLVTQARDWQHGVFIGATLGSEQTAAAEGKVGTVRRDPMAMLPFLGYNVGDYFAHWINLGKNADESKMPKIFFVNWFRRGDDGRFLWPGFGENSRVMKWIIERVEGKANGSTTPIGIVPSAGDLDLEGLDADPADVNEALAVNVQEWRDELPQIEEWFEFVGEKLPTGVKDEFEALKQRLAEAD
>NZ_CP032155.1|WP_149383279.1|308824_309697_+|DUF4436-family-protein
MQNAPAPAQSWWRRIATVGVILAIYVGSVAGYFWIDSSAHSLKPTSMDTANETVVLLELTAIHPLDNRVDVEVLVIPQKGFLDPEFGNLTTDMVVQLCPCIEFGELTFPTGQVPKVVKTSLLATGDADRWPFDKYTTETIGADVYVGSGDSRRFVPARVEVSGSLYGWDVRSDRTGPVTHSGGANDNATVTFSRSRGPLALIFGICLVLLTLPALALYAAIEMLLGKKKFQPPFSTWFAAMLFAVVPIRNVLPGDPPPGSWIDEALVFWVLVALVAALVIYLAAWARHSD
>NZ_CP032155.1|WP_149377549.1|309749_311282_+|AMP-binding-protein
MQIREHAQATPDKPAVILYPSGKTVTFGEMEARANQLAHLFRQAGLREGDSVAILIENNEHFHTVLWAARRSGLYYVPINTHLTAAEAAYIIDNSEAKAVVGSAGLKDTLAGLAAELPTMPPLLIITDGELEGWRSYPECVADQPVTPIDDEIEGDLLQYSSGTTGRPKGIKRELPHLPPSEVPGMMSALIGFWMTPDAVYISPAPLYHTAPSVWSMQTLAAGITTVVLEKFDAQGCLDAIARHKVTHGQFVPVMFTRMLKLPEDVRNSYDISSLQRVMHAAAPCPVEIKKQMIDWWGPIVDEYYASSEAIGSTLIFAEDWLTHPGSVGKPMMGALHILDEDGNELPPGQAGEIYFEGGMDFEYLNDAEKTAKSRDSHGWKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAENMLVTHPLVMDAAVFGVPDEEMGQSVKGVVQLVDASNATEEFAAELLAWLRERLSHYKCPRSISFESELPRTDTGKLYKQELIVKYSPAPTG
>NZ_CP032155.1|WP_149377550.1|311282_312221_+|enoyl-CoA-hydratase/isomerase-family-protein
MYLVDLSDPPPIGVTGAPGVVVAVGEPSTPEGEFWLDTATFALAERELDDRRFVAVESVSDTVALLRDRCRRWPHASAVCDDVLRSVDVTGPALPGIITESLAYSTLQSGPEFARWLDSRGPASLPDIADPVLAERDGGTLRIRFNRPQRHNAFSTDARALLLEALTVALLDDTVTELVLSGNGASFCSGGDLGEFGTFADPASAHLARTRHSPALALDELSRRLDRACRADIHGRVLGSGLEMASFCGWVSCRPDAVLGLPELTLGLIPGAGGTVSITRRIGRWRTAYLVLSGRTIDPATALAWGLVDEVA

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Crispr_ID: NZ_CP032155_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_2

293388-293636

Orphan

Consensus_repeat	Method
CCCGCACCGCCGGCGCCGCCGTTGCCG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP032155_2

>merge|NZ_CP032155|2|293388-293636|CRISPRCasFinder
CCCGCACCGCCCGCGCCGCCGTTGCCTACCCACAAGCCGGCGGTGCCGCCGCGGCCACCGGTTCCGCCCTGGAAGTTGCCGGTCGAGGTTCCACCGGCGCCGCCCGCGCCGCCGTTACCCGACAGCCCGGCCGAGCCGCCCTGTCCGCCTGCCGATCCCGCCGCGGTGGTGGCTCCCGCACCGCCGGCGCCGCCGTTGCCGGTGATCATGCCGCCGCGTCCGCCGTTGCCGCCCGCGCCGCCGTTGATC

>NZ_CP032155|2|2|293388-293636|CRISPRCasFinder
CCCGCACCGCCCGCGCCGCCGTTGCCT	ACCCACAAGCCGGCGGTGCCGCCGCGGCCACCGGTTCCGCCCTGGAAGTTGCCGGTCGAGGTTCCA
CCGGCGCCGCCCGCGCCGCCGTTACCC	GACAGCCCGGCCGAGCCGCCCTGTCCGCCTGCCGATCCCGCCGCGGTGGTGGCT
CCCGCACCGCCGGCGCCGCCGTTGCCG	GTGATCATGCCGCCGCGTCCG
CCGTTGCCGCCCGCGCCGCCGTTGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149383279.1\|308824_309697_+\|DUF4436-family-protein	unknown	unknown	gnl\|CDD\|379624
NZ_CP032155.1\|WP_149377546.1\|303547_304330_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP032155.1\|WP_149377540.1\|288044_289373_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP032155.1\|WP_149377538.1\|286939_287311_+\|hemophore-related-protein	unknown	unknown	gnl\|CDD\|374603
NZ_CP032155.1\|WP_149383278.1\|302850_303540_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350235
NZ_CP032155.1\|WP_149377549.1\|309749_311282_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236215
NZ_CP032155.1\|WP_149377548.1\|306913_308740_+\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP032155.1\|WP_149377541.1\|289369_289747_-\|DUF3054-family-protein	unknown	unknown	gnl\|CDD\|378616
NZ_CP032155.1\|WP_168215018.1\|287368_288037_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP032155.1\|WP_149377550.1\|311282_312221_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NZ_CP032155.1\|WP_149377534.1\|281419_282109_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377545.1\|299792_302801_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP032155.1\|WP_149377544.1\|295798_299311_-\|cadherin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|380078
NZ_CP032155.1\|WP_149377537.1\|286224_286773_+\|hemophore	unknown	unknown	gnl\|CDD\|275323
NZ_CP032155.1\|WP_149377543.1\|294580_295735_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|279875
NZ_CP032155.1\|WP_149377533.1\|280835_281423_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377536.1\|282519_283014_-\|XRE-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP032155.1\|WP_149377535.1\|282095_282515_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_CP032155.1\|WP_149377547.1\|305327_306761_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_168215019.1\|289772_290930_-\|UPF0104-family-protein	unknown	unknown	gnl\|CDD\|223469

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149377546.1\|303547_304330_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	3.42525e-89
NZ_CP032155.1\|WP_149377540.1\|288044_289373_+\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.42499e-41
NZ_CP032155.1\|WP_149377538.1\|286939_287311_+\|hemophore-related-protein	gnl\|CDD\|374603	pfam16525, MHB, Haemophore, haem-binding. MHB is a coiled-coil molecule that binds free haem in mycobacterial cytoplasm to deliver it to membrane proteins for shuttling through the membrane.	3.05502e-38
NZ_CP032155.1\|WP_149383278.1\|302850_303540_-\|NYN-domain-containing-protein	gnl\|CDD\|350235	cd10911, PIN_LabA, PIN domain of Synechococcus elongatus LabA (low-amplitude and bright) and related proteins. This subfamily contains Synechococcus elongatus PCC 7942 LabA which participates in cyanobacterial circadian timing, it is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system, and appears to be necessary for KaiC-dependent repression of gene expression. This subfamily belongs to the LabA-like domain family which includes the N-terminal domain of limkain b1, a human autoantigen localized to a subset of ABCD3 and PXF marked peroxisomes. Also included in the LabA-like domain family are human ZNF451, uncharacterized Bacillus subtilis YqxD, uncharacterized Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously Pseudomonas putida S16 NicB , which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	0.000469148
NZ_CP032155.1\|WP_149377549.1\|309749_311282_+\|AMP-binding-protein	gnl\|CDD\|236215	PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP032155.1\|WP_149377548.1\|306913_308740_+\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP032155.1\|WP_149377541.1\|289369_289747_-\|DUF3054-family-protein	gnl\|CDD\|378616	pfam11255, DUF3054, Protein of unknown function (DUF3054). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.38936e-25
NZ_CP032155.1\|WP_168215018.1\|287368_288037_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.77607e-80
NZ_CP032155.1\|WP_149377550.1\|311282_312221_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	4.38651e-43
NZ_CP032155.1\|WP_149377545.1\|299792_302801_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	2.73748e-130
NZ_CP032155.1\|WP_149377544.1\|295798_299311_-\|cadherin-like-domain-containing-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	7.12733e-16
NZ_CP032155.1\|WP_149377537.1\|286224_286773_+\|hemophore	gnl\|CDD\|275323	TIGR04530, hemophoreRv0203, hemophore, mycobacterial-type. Members of this family, including Rv0203 from Mycobacterium tuberculosis, are secreted heme-binding proteins used in heme acquisition. Such proteins are called hemophores. Members have a cleavable N-terminal signal peptide, and a mature region just over 100 amino acids long with a pair of invariant Cys residues. An unrelated hemophore, HasA, occurs in Gram-negative pathogens such as Yersinia pestis. [Transport and binding proteins, Other].	4.79512e-37
NZ_CP032155.1\|WP_149377543.1\|294580_295735_+\|AI-2E-family-transporter	gnl\|CDD\|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	2.06105e-61
NZ_CP032155.1\|WP_149383279.1\|308824_309697_+\|DUF4436-family-protein	gnl\|CDD\|379624	pfam14494, DUF4436, Domain of unknown function (DUF4436). This is a family of membrane and transmembrane proteins from mycobacterial and related species. The function is not known.	8.63531e-84
NZ_CP032155.1\|WP_149377535.1\|282095_282515_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.34534e-46
NZ_CP032155.1\|WP_168215019.1\|289772_290930_-\|UPF0104-family-protein	gnl\|CDD\|223469	COG0392, COG0392, Predicted integral membrane protein [Function unknown].	1.433e-40

>NZ_CP032155.1|WP_168215019.1|289772_290930_-|UPF0104-family-protein
MNAAREDHGPPARGKYWWVRWAVLGVALIVLVVEATLVWDQLAKAWRSLFSANGWWVLAAVAAAMLSMHSFAQIQRTLLRSAGVVVRQWRSEAAFYAGNALSTTMPGGPVLSATFVYRQQRLWGASPVVASWQLVMSGALQVVGLALLGLGGAFLLGAKNNPFSLLFTLGGFIALLLLAQAVATRPELIDGIGVKVLGWVNSVRGKPTDTGLRRWRETLNQLESVSLSRRTLGVAFGWSFFNWVCDVACLAFAAYATGGRPSLAGLTVAYAAARAVGSIPLMPGGLLVVEAVLVPGLVSSGMALPGAISAMLIYRLVSWIFISTIGWVVFFFLFRTEGPLDPDAVADEIAAAEAESGGAPVDDPADTALQGPVPPPCPDPDDDKP
>NZ_CP032155.1|WP_149377541.1|289369_289747_-|DUF3054-family-protein
MAVRSDTRPAALALAGDIVSVVVFCAIGRRSHAEGLTLAGIAETAWPFLSGTLAGWLISRAWRAPTAIAPTGVIVWLSTIVVGMLLRKASSQGVAVSFIIVASVVTAVLLLGWRGVAAVVRKRRG
>NZ_CP032155.1|WP_149377540.1|288044_289373_+|HAMP-domain-containing-protein
MSSLGQSLSLRSRVALAAAVAAAIVVALLAALTSVVLANNDEAQLDKRLDSIVDASMYPEQLRDPSRVVTTGRSRSTGQVMFQRGFQLPPLPPGTATVTVNNVDYRVRTVNVDQSGGILVSIGIRADSILLSRARIPLYVLIVCLAVMVALALGWILAGPAIRPLLKLTEQTRRLGTGHDRLDPVHGSREAEDLSEAMIAMLNRLADAQAATTNSLQAAQDFAANAAHELRTPLTAMRADLDTLRIHDLPPEEREEVVADLARAQRRVEAIITALGQLASGQLARAEDREPIDVAEMLDRVARENIRSGVGEIIVEADEAGTVWGWPAGLRLAVDNLVRNAITHGEATRIVLRARRQGPLLAITVDDNGRGLPAEEHRKVLGRFARGSTATAGGSGLGLALVAQQAALHGGDIELSDGPLGGLRAVLTVSTAPEPVAPAGQA
>NZ_CP032155.1|WP_168215018.1|287368_288037_+|response-regulator-transcription-factor
MVDDDPDVRTSVARGLRHSGFDVRVAATGKEALRLLANENHDALVLDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELVARLHALLRRASHSHEGSDAVTIGGLTIDTARRLVFVNGDRVELTKREFDLLAVLAENSGVVLSRQRLLELVWGYDFDVDTNVADVFISYLRRKLEREGVPRVIHTVRGIGYVLRSEP
>NZ_CP032155.1|WP_149377538.1|286939_287311_+|hemophore-related-protein
MLLNARLARRAVVGAIGTGAVAGAMLIGAAPSALADPPPNCTAADLAGVAAGVSAATSAYLFTHPDVNAFFTGLEGAPRDTIRSEVKQYLDYNPSVKADLQGIRQPLVDLKNRCGTSPDVPVS
>NZ_CP032155.1|WP_149377537.1|286224_286773_+|hemophore
MSASTISATAGLRRGVCAVLAATAAGGAALLALSTSVSMSEATAAPDPCAASQIAKTVGTVATNTGTYLDAHPQTNQALTTISQQQAGPQTVVALKSYFDANPAAAKDLQAIQQPLTSMSAQCKLPVSLPQLLGLLQSAQTGGLPAPAPGASTGTTPAQQLSGSQAPLGNGPLPGPATIGTR
>NZ_CP032155.1|WP_149377536.1|282519_283014_-|XRE-family-transcriptional-regulator
MTVAAQRDAVPAPAAQSFIDSRPVEFWPTASIREALESGDITVWQRIVMAIKRDPYGRTARQVEEVLEHSQPYGISKALAEVLLRARSHLEANERAEAARHVRLLLDRSGLAEQEFASRIGVAQSDLVSYLDATVSPPASLMIRMRRLSDRFAKMRAQRASGGD
>NZ_CP032155.1|WP_149377535.1|282095_282515_-|CoA-binding-protein
MTPDSAELEQILRDTRTVAVVGASDNPARPSYDVYRYLARFSDFELYPVNPNISDIDGARVYPSLAELPVVPDMVDVFRRYDDLPGVLADTLALSPHPKCLWLQQGLWHDEVAEQARAAGLRVVMDRCLKVDYARLIGR
>NZ_CP032155.1|WP_149377534.1|281419_282109_+|hypothetical-protein
MRNLARVLAFDIVAPLAAIAALLAIGVVLGWPLWWVAVCSMLCLLIVEGVIVNVVLFRRDSVTVGTDDDGPGLRLAVVALATTALVATVVVGYTQWTLPDRDFTRDSAEVVRIATAASEATATFTPADPMSSIDRAATFMAPDRADAFKNEFGKSTSDLAKKNISATAQTISAGLEALGPTAASVAVVMRGTQSQPGQQPSTAVLALRVSLAKQDGRWLVLDISPINAR
>NZ_CP032155.1|WP_149377533.1|280835_281423_+|hypothetical-protein
MPEAEPTDDGADDRTFTGYGVASAVLGVVAVAAVVLGALIWSGHHDAADERAYQSKVMSAAANWTSVLINMNVDNVDASLAKLHDGTAGQLNSDFEAAIKPYREVVRTLQARTTGQIESVSFEAVHHNLNVQPGQAPQAPALPPELANRTDSVLVIATSVSENSGNKPTTVRWNLRLGVSDVDGKLMISRLESLR
>NZ_CP032155.1|WP_149377543.1|294580_295735_+|AI-2E-family-transporter
MPATRVSDDDSVDPFLRKTAAWSWRLLVVGAAIVALLWVVSRLEVIVVPVALATMLAALLLPAVDWLDRRGAPRGGAVALILLGGFAIFGGILTFVVSQFVSGLPGLVEQVTYSIDGLRRWLVDGPAHLSREQIDNAGNTAIKALRDNQEQLTTGALSTAATLTELVTGALLVLFTLIFLLHGGRNIYSFVTKIVPSSARERVRDAGRAGFGSLIGYVRATALVALVDAVGIGTGLAIMGIPLALPLASLVFLGAFIPLVGAVVTGFLAVVVALLAKGVVYGLITLGLIIAVQQLEAHILQPLVMGRAVSIHPLAIVLAISAGAVLAGIVGALLSVPLVAFLNSAIRVLVADNPAEEAAELEENDDGIILNAEPDVVPPKREKD
>NZ_CP032155.1|WP_149377544.1|295798_299311_-|cadherin-like-domain-containing-protein
MKSKRPVAVASKPSGGQTPDAPSAEVLAAALATTTRRDTATASAVAAAVANSPAEIAREKAVADINMSVGWVPGVGTVVNGISLVSDFVDFTKAALRGDAVDMRDEIGDMTLDLVGMIPVVGAPVAATIHRSTVPVNRAPRPVDDSYSVDQDTQLTGNVLTNDSHPGGDSMTAVVSTAPSHGSLTLNTDGSFVYTPAAGYSGADSFSYTVTDTKGANAIGNVTIAVKYVAPPPVVDQQHPYTIDATDPATGTISGHFNVTHDKPFTYHVVNAPDATLGSFELNEQTGEWTFTPNPRTRVLAGTLGPTSPAAVKLSFSATATDGMATTAPIVVTEHIAGADRAALSLPPGTMPVLSFVDSRTGNAYIFGYRGNLIDGPDDQSVSYLAAVIHADGTSSIPSGASPVSGLVREAFAVGDTTFVVSQTGGDESSFQTYLSILGSDGLTPLGEPIPGDFRQPLTVAGTTYLLTQTGTYESGYQTHLTRLRADGVTSTTEMPGAFYGRTIVIGETTYLVTDTGTYESGYRTQLTTLGADGATSTTSVPGRFSNHTLVVGDTTYLVTVNGSQQSGYQTHLTRLGPDGVTSTTSIPGQFYEDSSGYSVVAGDITYLVTQTGDYDSGYNTHVTEVRTEGVSPTTTIPGWSWGGPTLVGDTRYLLVPTQSGTATHVVALTPDGATSVGSIPGVLSGDPIVVGDTTYFISHIGDSGVAATWQSVVTTLAPTPGGVTVIDDPIPGYRWAMRPIVVSDTTYLVTETWNSSVGYETHLTALLPDGVAPLGLATLGTVSGNPTVVVAGETTCLITTVRYYWLSDGTYAYTRTLLTAVEPEGLTLWEDPLHGYPGVAPITIGDTTYLVLETDDPTSGYQLQLLSVTAGGVRAIGAPTSGRVNSHSDFDTVVVGDTTYLIVETSDAAGGQQTSLVKVGPGGLTAVPGSLPGHPISAPVVVGDTTYLVTQTGQYDSAQTHFTALDPQGVLQPAYTVSGTLAYEPLIVAGDLIYVKTDGWETTGEGSHSTNHVYVTALAPEGPSSVDYPVQYGEPAIVVGNTTYLMSTVFPDEFVTGTDTTKTYIVALTPHGAVQFAEPVRGYSPGPIVAGDTLYLEFASYPDDVDDADDVTTYLVTLTPDGPVFAEPFPGLAPFYMDPIFTLGDTTYVTTTSGVWAIGVDAPSPASRL
>NZ_CP032155.1|WP_149377545.1|299792_302801_-|MMPL-family-transporter
MFAWWGRTVYRYRYIVIAVMVGLCLGGAVYGASLGKHVTQSGFYDNGSESVRASTLADEVYGRDRTSHVVAILTPPGDEKVTDKNWQKTVTEELDQVVKDHPDQIVGWVGWLKAPDTTDPTVNQMKTADLRHTFISIPLKGDDDDTILKNYQTIEPALKKVNGGTIQLAGLNPLASELTGTIGTDQQRAELAIVPLVAVVLFFVFGGAVAAALPAIIGGLTIGGALGILRLTAEFGPVHFFAQPVVTMMGFGIAIDYGLFVVSRFREELAEGYDVEAAVRRSVMTSGRTVAFSSVIIVASSLPLLLIPLGFLRSITYAIIASVLLAAFLSITVLPAVLGILGANVDALGVRTLLRVPFLANWSFSRRIIDWFIEKTQKTKTREEVEKGFWGRLVNVVMKRPIAFAAPIVIIMTLLIIPMGQLALGGLSEKYLPPDNPVRSAQEQFDKEFSSFRTEPLTLVIKTNNGSPVTDQQLDDLRAEAQTVSGFAGSDDPSKMWEERSAQNGGSKDPSVRVLQNGLIDSSTAPQKIEQLRALTPPRGTTVLVGGTQALAQDSILTLFDKLPLMVLILVLTTTVLMFLAFGSVVLPIKAALMSALTLGSTMGILTWMFVEGGHGSGLLNYTPQPLFAPMIGLIIAVIWGLSTDYEVFLVSRMVEARERGLSTAEAIRIGTATTGRLITGAALVLAVVVAAFAFSDLVVMKYLAFGLLIALLLDATVIRMFLVPAIMKLLGDDCWWAPRWMKRLQVKIGLGETHLTDERKRPVVRETDSALVGAGAPVSAAEARRPAHDPTHPVEGRAMPRVVGRAEYRNPPPPQEAPSAAGTARMPDPVEAGTEAPTTRFSVAKNAVKNAVNTAASAAKTNRPPTPPAPDREIESWLGELRGSGGQERSDRGSMQPGSTPTPTPPSPPSAQPTQAMSAPEDATTAIPAQHDRTGGDDVSPAISAEETRAIPVSRPDQGDSEVATEKLNSRGKKEGDDRPRRGGGAGGVSAADLLRREGRL
>NZ_CP032155.1|WP_149383278.1|302850_303540_-|NYN-domain-containing-protein
MSVIDDATAPALPDSGEQPVSPPIQRVLLVWDAPNLDMGLGSILGGRPTAAHRPRFDALGRWLLARTAELSAGHPEVPVEPEATVFTNIAPGSADVVRPWVEALRNVGFAVFAKPKIDEDSDVDSDMLAHIELRRTEGLAAVLVASADGQAFRAPLEEIAKAGTPAYVLGFREHASWALASDTLEFVDLEDIPGVFREPLPRIGLDSLPEQGAWLQPFRPLSSLLTSRV
>NZ_CP032155.1|WP_149377546.1|303547_304330_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSDHGQMHAQRHGGSATPDVWPAHPYPRITSFRSRRSTLTEAQQDAWDRLWPEMGTQAREGEKPAGLLDTTAWFGRQAPVVLEIGCGTGTSTLAMAMAEPDIDVVAVEVYKRGLAQLLSAVGREGVPNIRLVRGDAVDVLENMFGPGSLTGVRVFFPDPWPKSRHHKRRLLQPNTISLIADRLRPGGVLHAATDHAGYAEQIAEAGDAEPLLRRIQPGDELPISVKRPRTKYETKAAEAGSAVAELLWLKRPSVVERDRG
>NZ_CP032155.1|WP_149377547.1|305327_306761_+|hypothetical-protein
MTDPVDSLVSQLDPSLPMPSIVRRDVVLVAGPWLSGTSSVVTALRERLPDHAVVETDELAAGQAPAAVVFVVSATASLTESDCALLDFVTADTDAVLGVVAKIDVYRTWRDVLAADRALVEQRAPRYRDMPWVGAAAAPDLGEPVVDELVTALREILADDTRDRRNHLRAMENRLLTVHRRLELDVAGAGREARLAALRVQRTSAVHRYRVDKSQRSIALRARIQQARLELTYFARNRCASVRTELQEDVAGLSRRSLPRFPDEVRRRAEEVADDVAAGVTRQLADVGEELGLAVEPVESRPEVEVGAAPPRARGAETRLMLLLGGGFGAGVALTLSRLFAELAPQWTVGGGIAGAVIGVALTLWVVGVRGLLHDRAILDRWVAEVLGRQRTALEEWVATHMLGAEASLGCVAAERDAADRARTEDTVARIDREIREHATASARAVVLRDRQAPAIERALAAVRDELDALHTAKQAN
>NZ_CP032155.1|WP_149377548.1|306913_308740_+|phosphoenolpyruvate-carboxykinase-(GTP)
MTSATIPGLDNAPTKHQGLLAWVQEVAELTQPDRVVFADGSEEEYQRLCDELVAAGTFTKLSDSEEPSSYLARSAPSDVARVESRTFICSEREIDAGPTNNWMDPAEMRGLMTELYRGSMRGRTMYVVPFCMGPLGADDPKLGVEITDSEYVVVSMRTMTRMGKAALEKIGDDGFFVKALHSLGAPLAPGEEDVPWPCNDTKYITHFPETREIWSFGSGYGGNALLGKKCYSLRIASAMAHDEGWLAEHMLILKLISPENKSYFVAAAFPSACGKTNLAMLQPTIPGWRAETVGDDIAWMRFGKDGRLYATNPEFGFFGVAPGTNWSSNPNAMKTVAAGNTVFTNVALTDDGGVWWEGLEGDPQHLIDWKGNDWEAGSSEKAAHPNSRYCTPMSQCPTLAPEWDDPQGVPISAILFGGRRKTTVPLVTQARDWQHGVFIGATLGSEQTAAAEGKVGTVRRDPMAMLPFLGYNVGDYFAHWINLGKNADESKMPKIFFVNWFRRGDDGRFLWPGFGENSRVMKWIIERVEGKANGSTTPIGIVPSAGDLDLEGLDADPADVNEALAVNVQEWRDELPQIEEWFEFVGEKLPTGVKDEFEALKQRLAEAD
>NZ_CP032155.1|WP_149383279.1|308824_309697_+|DUF4436-family-protein
MQNAPAPAQSWWRRIATVGVILAIYVGSVAGYFWIDSSAHSLKPTSMDTANETVVLLELTAIHPLDNRVDVEVLVIPQKGFLDPEFGNLTTDMVVQLCPCIEFGELTFPTGQVPKVVKTSLLATGDADRWPFDKYTTETIGADVYVGSGDSRRFVPARVEVSGSLYGWDVRSDRTGPVTHSGGANDNATVTFSRSRGPLALIFGICLVLLTLPALALYAAIEMLLGKKKFQPPFSTWFAAMLFAVVPIRNVLPGDPPPGSWIDEALVFWVLVALVAALVIYLAAWARHSD
>NZ_CP032155.1|WP_149377549.1|309749_311282_+|AMP-binding-protein
MQIREHAQATPDKPAVILYPSGKTVTFGEMEARANQLAHLFRQAGLREGDSVAILIENNEHFHTVLWAARRSGLYYVPINTHLTAAEAAYIIDNSEAKAVVGSAGLKDTLAGLAAELPTMPPLLIITDGELEGWRSYPECVADQPVTPIDDEIEGDLLQYSSGTTGRPKGIKRELPHLPPSEVPGMMSALIGFWMTPDAVYISPAPLYHTAPSVWSMQTLAAGITTVVLEKFDAQGCLDAIARHKVTHGQFVPVMFTRMLKLPEDVRNSYDISSLQRVMHAAAPCPVEIKKQMIDWWGPIVDEYYASSEAIGSTLIFAEDWLTHPGSVGKPMMGALHILDEDGNELPPGQAGEIYFEGGMDFEYLNDAEKTAKSRDSHGWKTVGDIGYLDEEGYLYLTDRRHHMIISGGVNIYPQEAENMLVTHPLVMDAAVFGVPDEEMGQSVKGVVQLVDASNATEEFAAELLAWLRERLSHYKCPRSISFESELPRTDTGKLYKQELIVKYSPAPTG
>NZ_CP032155.1|WP_149377550.1|311282_312221_+|enoyl-CoA-hydratase/isomerase-family-protein
MYLVDLSDPPPIGVTGAPGVVVAVGEPSTPEGEFWLDTATFALAERELDDRRFVAVESVSDTVALLRDRCRRWPHASAVCDDVLRSVDVTGPALPGIITESLAYSTLQSGPEFARWLDSRGPASLPDIADPVLAERDGGTLRIRFNRPQRHNAFSTDARALLLEALTVALLDDTVTELVLSGNGASFCSGGDLGEFGTFADPASAHLARTRHSPALALDELSRRLDRACRADIHGRVLGSGLEMASFCGWVSCRPDAVLGLPELTLGLIPGAGGTVSITRRIGRWRTAYLVLSGRTIDPATALAWGLVDEVA

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Crispr_ID: NZ_CP032155_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_3

1257355-1257431

Orphan

Consensus_repeat	Method
CGCGGTGCCGCGCACGCGCAACAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_3

>merge|NZ_CP032155|3|1257355-1257431|CRISPRCasFinder
CGCGGTGCCGCGCACGCGCAACAGCCTGTCTTTGTTTTGTGGGGATCCTGACGCGGTGCCGCGCACGCGCAACAGCC

>NZ_CP032155|3|3|1257355-1257431|CRISPRCasFinder
CGCGGTGCCGCGCACGCGCAACAGCC	TGTCTTTGTTTTGTGGGGATCCTGA
CGCGGTGCCGCGCACGCGCAACAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149378272.1\|1271066_1273196_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032155.1\|WP_149378259.1\|1247428_1248625_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP032155.1\|WP_149378269.1\|1264752_1265430_+\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|379142
NZ_CP032155.1\|WP_149378265.1\|1256108_1257353_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_CP032155.1\|WP_149378258.1\|1246189_1247362_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173838
NZ_CP032155.1\|WP_149378271.1\|1268982_1269654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_115321859.1\|1263719_1263905_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149378266.1\|1261752_1262604_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|224666
NZ_CP032155.1\|WP_149378263.1\|1253431_1254574_-\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP032155.1\|WP_149378260.1\|1248644_1248986_+\|DUF861-domain-containing-protein	unknown	unknown	gnl\|CDD\|225981
NZ_CP032155.1\|WP_102808852.1\|1252781_1253435_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|132427
NZ_CP032155.1\|WP_149378270.1\|1267012_1268980_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377886
NZ_CP032155.1\|WP_149378273.1\|1273192_1274329_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NZ_CP032155.1\|WP_149383362.1\|1270437_1271070_+\|TnsA-like-heteromeric-transposase-endonuclease-subunit	unknown	unknown	gnl\|CDD\|380186
NZ_CP032155.1\|WP_149378268.1\|1264310_1264634_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149378262.1\|1251044_1252667_-\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|224154
NZ_CP032155.1\|WP_149378261.1\|1248990_1251048_-\|acetate--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|379254
NZ_CP032155.1\|WP_149378257.1\|1245719_1246193_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP032155.1\|WP_149378267.1\|1262584_1263637_-\|esterase	unknown	unknown	gnl\|CDD\|132866
NZ_CP032155.1\|WP_149378264.1\|1254599_1255976_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223080

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149378259.1\|1247428_1248625_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	5.96728e-47
NZ_CP032155.1\|WP_149378269.1\|1264752_1265430_+\|trypsin-like-serine-protease	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	3.9477e-07
NZ_CP032155.1\|WP_149378265.1\|1256108_1257353_+\|extracellular-solute-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.38978e-81
NZ_CP032155.1\|WP_149378258.1\|1246189_1247362_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173838	cd00567, ACAD, Acyl-CoA dehydrogenase. Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA oxidases (AXO) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. In contrast, AXO catalyzes a different oxidative half-reaction, in which the reduced FAD is reoxidized by molecular oxygen. The ACAD family includes the eukaryotic beta-oxidation enzymes, short (SCAD), medium (MCAD), long (LCAD) and very-long (VLCAD) chain acyl-CoA dehydrogenases. These enzymes all share high sequence similarity, but differ in their substrate specificities. The ACAD family also includes amino acid catabolism enzymes such as Isovaleryl-CoA dehydrogenase (IVD), short/branched chain acyl-CoA dehydrogenases(SBCAD), Isobutyryl-CoA dehydrogenase (IBDH), glutaryl-CoA deydrogenase (GCD) and Crotonobetainyl-CoA dehydrogenase. The mitochondrial ACAD's are generally homotetramers, except for VLCAD, which is a homodimer. Related enzymes include the SOS adaptive reponse proten aidB, Naphthocyclinone hydroxylase (NcnH), and and Dibenzothiophene (DBT) desulfurization enzyme C (DszC).	1.18011e-84
NZ_CP032155.1\|WP_149378272.1\|1271066_1273196_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.85684e-09
NZ_CP032155.1\|WP_149378266.1\|1261752_1262604_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|224666	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	9.23618e-23
NZ_CP032155.1\|WP_149378263.1\|1253431_1254574_-\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	5.05409e-149
NZ_CP032155.1\|WP_149378260.1\|1248644_1248986_+\|DUF861-domain-containing-protein	gnl\|CDD\|225981	COG3450, COG3450, Predicted enzyme of the cupin superfamily [General function prediction only].	1.23183e-27
NZ_CP032155.1\|WP_102808852.1\|1252781_1253435_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|132427	TIGR03384, betaine_BetI, transcriptional repressor BetI. BetI is a DNA-binding transcriptional repressor of the bet (betaine) regulon. In sequence, it is related to TetR (pfam00440). Choline, through BetI, induces the expression of the betaine biosynthesis genes betA and betB by derepression. The choline porter gene betT is also part of this regulon in Escherichia coli. Note that a different transcriptional regulator, ArcA, controls the expression of bet regulon genes in response to oxygen, as BetA is an oxygen-dependent enzyme. [Regulatory functions, DNA interactions].	5.04315e-17
NZ_CP032155.1\|WP_149378270.1\|1267012_1268980_+\|hypothetical-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	0.000635582
NZ_CP032155.1\|WP_149378273.1\|1273192_1274329_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	0.000126571
NZ_CP032155.1\|WP_149383362.1\|1270437_1271070_+\|TnsA-like-heteromeric-transposase-endonuclease-subunit	gnl\|CDD\|380186	NF033179, TnsA_like_Actin, TnsA-like heteromeric transposase endonuclease subunit. The transposase of transposon Tn7 contains multiple subunit. Members of this family are largely restricted to the Actinobacteria, resemble the endonuclease subunit TsnA of the multimeric transposase of Tn7 and its relatives, and occur in genomic neighborhoods that suggest a similar role in transposition.	3.28961e-72
NZ_CP032155.1\|WP_149378262.1\|1251044_1252667_-\|NAD(P)-binding-protein	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	4.67543e-89
NZ_CP032155.1\|WP_149378261.1\|1248990_1251048_-\|acetate--CoA-ligase-family-protein	gnl\|CDD\|379254	pfam13549, ATP-grasp_5, ATP-grasp domain. This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.	7.40894e-62
NZ_CP032155.1\|WP_149378257.1\|1245719_1246193_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	7.36602e-09
NZ_CP032155.1\|WP_149378267.1\|1262584_1263637_-\|esterase	gnl\|CDD\|132866	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.	3.49426e-80
NZ_CP032155.1\|WP_149378264.1\|1254599_1255976_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223080	COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].	3.30453e-146

>NZ_CP032155.1|WP_149378265.1|1256108_1257353_+|extracellular-solute-binding-protein
MPAPIGPGPNRRQFLQRAALLAAGTPALVAFLDACSKGGQFTSAPTLKIASPQNPVKWDIPNDNKPIADGLAPEKGATLQLYSYADYIAPDAIKSFEDKYATKVAVSTFNDTDEAITKIRGGNVDYDIYFPSYDQISRLVNGGLVRPLNHSYIGNITNVWPFFANPWYDQEWRFTVPYTVYTTGIGWRADQVPADIGALKNPYESLWDPAYKNKTAVIDDWHTAMAMVLLKLGITDVNTSSADDLKKLGDQLTELVKATSPKVTVTMYSDLPAGQIGLSQMWSGDIVNAVNYLPEGTGPEILRYWFPSDGKGLVDNDLIVLLRGGKNPVLGHLFLNHMLETEVAKQNFKQIGYQPPQVSLNPDSLVAEGLVPENLKSAIVRPEYFDTGYRLLELDATNDAAWHNVWRAFKAGGS
>NZ_CP032155.1|WP_149378264.1|1254599_1255976_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MASPTIESPVQDAVDRLIADQEKVFLARQPRSTEMICRAKEHLAGGATSNWQIAQPQAVWMSHGAGSKVYDVDGTEYVDMHGGYGASIAGHAHPAIVAAVSRQVRRGTHFAQPTEDAIWIATELARRFDLPLWRFANSGTEATMDAVHLARSVTGRDLIIKVEGCYHGHHDSVQVSVLPEADQVGPRDHPIGVPGNTGIPAAIRDLVVVVPFNDPEAVARALAVHRGGIAAMILEPVMMNAGIIPPDAGYLAAIRELLHADGALLIYDEVKTGFTTGPGGVTATSGVVPDIVCLAKALGGGISVAAIGGTTAVMSAIADGRYEQVGTFNGNPLAMAATRATLSEVLTPAAYTRMTSLAQRLRGALEATVTEHGYGWHVVSVGAKGCVTFKREPVHDFRDFLHIDDRLGHLHWLMQHNGGVFLPPWGKVEQWLLSVQHDEADVDRFAANFARLAEAVAA
>NZ_CP032155.1|WP_149378263.1|1253431_1254574_-|polyamine-ABC-transporter-ATP-binding-protein
MTGGAIRLHQLAKAFDGVPAVTGIDLDIPAGQFYSLLGASGCGKTTTLRMIAGFEKPDSGRIELDGRDVAQDPPHKRPVNTVFQTYALFPFMSVWDNVAFGLRYQKAPKPEITRRVGEALDLVRMHEFAKRRPTQLSGGQQQRVALARALVLQPRVLLLDEPLGALDAKLRKQLQLELRAVQREVEITFVYVTHDQDEALTMSDQIAVLAEGRVEQVGPPQEIYSAPATTYVAGFLGAANIFDAEVLENNDGAALCSALATRLGAAVDASCRPGPAAIVIRPERIALQSPEDPVSPGHNAIRGTVAQVVYHGASTQVHVDVGEPTALVVDVPNRYGPGSAAYDAGMPITCVCSTDAVRVLARSAAVVIKDPAADLVAGPV
>NZ_CP032155.1|WP_102808852.1|1252781_1253435_+|TetR-family-transcriptional-regulator
MADPAPATENNEARRIQMLRAAAELICERGFSETRISDVAKRAGVSSALVIYYFGTRDRLLVDALRHSEESFYEAAEQMLAEVPSVRERLSLLIQWTCVPEAENEIPGAWGLWFDLWAQAFRHDEVKAGRVELDARWRRMIVDTVESADLKSDVDAKMFALEFSALLDGLSIQVALEDPEVDSKVAYEIAMRFAERELDLPREKRTLVAAGKGRRSR
>NZ_CP032155.1|WP_149378262.1|1251044_1252667_-|NAD(P)-binding-protein
MSNTYDAIVIGGGHNGLVSAAYLARSGANTVVLESRGSLGGAATTEAPWEDAPHLRVTRLSYVMSLMPPTIVRDLSLERHGYKVHPMGPYYQAFPEGGSLTIYEDDPARTYEQLAKFSKKDADTWPKWNAWLEGIADVMGPLLTQVPPNIGSHKPSDLFELAKLGWSQRGMTTRMMGDVTRLLTMSIADLLDDWFESPQIKGALAVNGVIGTWAGPYEPGTAYVMAHHSIGDVGDGQLGSWGYPEGGMGAVSEAIARSARSFGAEIRTKARVSRMLVRGGRIEGVVLENGDELRAPLVVTTLHPKTAFLEHIPRTELPPEFVADIEHFKTRSGVVKINLALAELPNFTADPSDGQAEHHTGSVEMAPTMEYIEAAFQDARVGKPALMPFSDGVIPTTLDKTLNPDGTHIMSLFTQWVPADWANEPHTAELDAYTDRLIDLYDQVAPGFKSSILHRDIVGPHEMEQEYGLIGGNIFHGELSLEQLFHMRPAPGYADYRTPISGLYNGSSGTHAGGGVCGIPGWQAARAALADTKKKRFRRR
>NZ_CP032155.1|WP_149378261.1|1248990_1251048_-|acetate--CoA-ligase-family-protein
MSDSRRGSVAAMLEARSVALVGASAKPGSFGERMIVEARRSSARMHLVNPRYDHIDGITCAPSLCALDEPVDLVLLGVPDTALLAELKSAAAMGAESAVIFGSAHGDQLRRAVADTATDAGMAVCGGGCMGFVNNVTGLRALGYLEPDPLPPGGVSLVTHSGSAFSTILRASRGFGFRLAISSGQELVTDTADYVDYIVDDPGTTMIALLLETPRSVGRLRAGLRRAAQRDIPVVILPVGHSPRGRAMVAAHSGALAGDAAGWQAFCADTGAVRVTDMAEFVDTIELFETGRRRRPGSHGIATVHDSGAERALCADLAHELAVDFTELAEPTLHALAELLDDGLSPGNPLDVWGTGADTRALFSGCLRALVDDPGVAVTALAVDLVTEFDGDTGYPDAVLDVVAGTDTALAVLTSVPSAVDPDTANRLRSNGVAVLEGARSGIAALGHLARWPLPVSTALPQIDTERVERWTAALTAAEWNAPTAFRLLADYGIPVTRSYAAHTVSEVLTAADAVGYPVVLKTLGAAHKSDVGGVILGICDRESLWVAYDEMAERLGPDVSVDAMAPAGVEISLGVVRDDNFGPMVVVATGGTLVELLADRAVACPPVTRESAIALLRSLRTAPLLAGWRGAAPVDIDALADVVVGFSQLAIELGEHIDAVEANPVIASPGGVVAVDALVVLRAR
>NZ_CP032155.1|WP_149378260.1|1248644_1248986_+|DUF861-domain-containing-protein
MTVLTTVLAEAADAELEDWGPLEEATAHPMATHGVEVWVDGDKSAGIWQCAPGPSHWTLETNEVIYVVSGRMTVTPDAGEPSEVGAGDLAVFPVGWTGTWVIHETLRKAYAIF
>NZ_CP032155.1|WP_149378259.1|1247428_1248625_+|FAD-dependent-oxidoreductase
MASSHSADIVVVGGGTVGAWTAVQLAERGAGRVVLLEAQTLGDGASSRAAGMVRAQGGTETAIRLGLRSQEFYSTSGDRYPLDCGFVAQGYLMPCFTNAEVQQAHDRIALQRRLGLAVEWLSSSDIDDRRTGLAPGVTAGGSYAPGDGYINAPRNVLAYAAALTAHRVDVRERCSFTGLRVANGRVVGVDTSDGPIDTGRVVLTGGPMLGEVGATAGGRIPAGGTRHQVVVTEPLRDADIDELPMVFDVSEGIYWRPGEFGGVLWGMSNPAERPGEATEFDWSYYQKALARIESLFPAVRGLGLRRAWAATIDYTGDHLPILGPLLTDDGAIDGTVVASPAGHGMMWGPAVAEAAADLTLTGGCDWLDLTDLGLDRFDADGNSRLEPEPISLPFPEHA
>NZ_CP032155.1|WP_149378258.1|1246189_1247362_-|acyl-CoA-dehydrogenase-family-protein
MYGLTAEDLRIRDTAREFVETLIPYEVDAEMAGGQLPKELTAEHHARAIELGLYATNMPTSVGGPGFTALQQVLVQEQVGRVTNAIAWVMHTPPQWWAGVATEYQKQRWLLPAVRGEKHEAYAITEEFAGSDVSALETTARREGDEYVINGIKWHVTSFNLAEYVFVQAVLVGGPHEGDHVLLVVDLPWPGVEVVRTPHYSHHIPDEHPIVSFTDVRVPVSHLVGAEGEGMTFTQDWFRFERLMVASRCVGAAQRLVDEMTSFATDRMVDGKPLGEYQLVAGMLADSATELFAARSMLYEVARGIDAGLDRKALHGQASMAKLYCSEMAGRVADRAVQIFGGRGYMRENVAERMFRELRVERIWEGASEIQRIIIGRQLMQRGPAALLGS
>NZ_CP032155.1|WP_149378257.1|1245719_1246193_+|SRPBCC-family-protein
MAHPVVVQQSRAIPVAVPDAFAKTLPMPLPQLFHRWYGPIPPIKAVHDQTGDWSAVGQTRAIALVGGGGMRETLTTVDAPHAFGYTLTDIRGAMAPLIDHVEGLWAFSEQGTGTKVTWQWTLHPKSALTAPLLPVFARIWRGYANQALATLSDHLLS
>NZ_CP032155.1|WP_149378266.1|1261752_1262604_+|patatin-like-phospholipase-family-protein
MTTKRALILAGGGIAGIGWETGILRGIADESPDTAQSLLNSDVLVGTSAGSTVAAQISSSLSLEALFERQTAETSSEIDPGVDIDAISALFLTAMAEPGELTEKLQRIGRIALDTPTVGEAVRRRVIEARLPEHRWPHQDLRITAIDTATGELVVFDSSSGVDLVDAVAASCAVPGTWPPVTIGGRRYMDGGVSSSVHTAVAADCATAVVLVPASESAPSPFGSGTAAEIAGFRARTFAVFADDASLSAFGPNPLDPRCRVPSALAGREQGRRVAAAVTEFLA
>NZ_CP032155.1|WP_149378267.1|1262584_1263637_-|esterase
MPDQFPTSRVALALGSGGARGYAHIGVIDELTRRGYEIVGVAGSSMGALVGGLHAAGSLDEFAEWAQTLTQRAVLRLLDPSITAAGVLRAEKILDAVRDILGDVTIENLPIPYTAVATDLIAGKSVWLQRGPVDAAIRASIAIPGVIAPHVLDGRLLADGGILDPLPLAPIAAVNADLTIAISLSGPDPEGSQDTAQAPEAAANTEWLGRLLRSTSALLDTNTARSLLDTPAARSMLSRFGTSSVSEDGDDVEPSSDDQLIDSSREAPIPKLGSFAVMNRTIDIAQAALARHQMAAYPPDLLIEVPRTACRSLDFHRAAEIIDLGRELAVKALDGYRHIGPEIIITPETP
>NZ_CP032155.1|WP_115321859.1|1263719_1263905_-|hypothetical-protein
MTKYAVAGLLGTAMSALVIGLAAPAAAAPSGSGDARDTTIDSLGYTVGGDKLGTIDVIQRD
>NZ_CP032155.1|WP_149378268.1|1264310_1264634_+|hypothetical-protein
MTDRLRETMEGTLGHFWYDLDEVFQLNKSLDGYVKLENNGLFELDTLRTRELESEFRTGRKRLPRPEAVYGMTGSTRSMFFDIAGISRSNVMGQKASTQTINTRASV
>NZ_CP032155.1|WP_149378269.1|1264752_1265430_+|trypsin-like-serine-protease
MTVTTESMHRTLQIWRPDGGSGSGFTIDRHGRQWLVTAQHVVEGVEPGQVKVVSREGKSYDGLEHVPTNPDADVAVFSLFHKRLTLNYELEPSTSGVALGQDSYFLGFPLGWSTQNEGEQLPFVKKAVLSGMTKTTSGVPVWMFDGMNLQGFSGGPIVFKHNMTGKWHVMGVVHGYQTTPVLVHDHAGRAIGRVNTNTGFFVGFGINHATDAIDEFVKKSAVSDL
>NZ_CP032155.1|WP_149378270.1|1267012_1268980_+|hypothetical-protein
MIDDQEAEDAAPDDAAHFDRTALTNAVTAGVQSAMTVGGSPLTDLVTAQVQRAAADALGDVGGVFGGHVGGVADQLREAAMGGIGQRWSDMVGLHGVDHLPGMRSVMDAALAGTQRWDFGGHVGGVADQLREAAMGGIGQRWSDMVGLHGVDHLPGMRSVMDAALAGTQRWDFGGHVGGVADQLREAAMGGIGQQWSDMVGLHGVDHLPGMRSVMDAALAGTQRWDFGGHVGGVADQLREAAMGGIGQQWSDMVGLGGLASVVGERAGDLVGLRGLASVVGERAGDLVGLRGLASMVGERSFVSPLEQLRGVGSPGLALGAQAAMGGIGQRWSDMVGLHGVDHLLGMRSVMDAALAGTQRWDVGGVFGGHVGGVADQLRGAAMGSYGSHLDEVMRRSQRSIHDFMYGSSRFPDPMSWMNDALRAPAESITEMMRSLWPLADRGMRAAQLALRTALNVVRMLERNDPRAREAVRRFLLDWLDFQHVSWDLVCSATLVLMNVGSWLPDGLLSLTFDPRSRLRALTLKEHRAVTRLSTDPDLSFRGKPLLSLDQPVAASDSDGAPTVLRDLAADRAAPDPAAVEEEITDPRILRVWWKFTDREREILREKSQPRVTWPAAAIACGGTAGEGDRLRRKARRLARAEESTDAPTGTIRAS
>NZ_CP032155.1|WP_149378271.1|1268982_1269654_+|hypothetical-protein
MDGFIRPAQRAVHDAYERTKGPVAYLDESYQAPADGSHQGSFYLFTAVLVAVKDMATLRSGLDEIADCDYWHTSEALKTDDGRALTRQMLDYLAEGIEPCVITHRVTVDADDSDAEEARKQCYQALTVALTTGRTGAWDPVDLLILEERNQRNFKNKDQANHKELVSTKLVPRQTRLLQTSPSCEHLLWLPDLAASAYRRTITHQDRSLFQIIKDQSHFVALT
>NZ_CP032155.1|WP_149383362.1|1270437_1271070_+|TnsA-like-heteromeric-transposase-endonuclease-subunit
MLAASPWRTFRWYFGQRHYSGTYWSSRVGDHVIYESRLELSCLIRADFDPDVRAMVAQPFLLSADVGGRLRRHIPDYLWDTVDGPVVVDVVRRERLAHPDIETLCAWTNEVVGRLGWGYQVVSESEPVEFANIRFLAGYRRDWLVPSALSDAMRAAIPALTGGSIARAASNFQDFPRPIRHAALFNLLWRHELRADLGDPLSPSTVLEEP
>NZ_CP032155.1|WP_149378272.1|1271066_1273196_+|DDE-type-integrase/transposase/recombinase
MKPATADVRIGTRFLYDGEIVEVVELHCRPGDVVLATKDLRSGVFRRIALSEVMFSDDVRLLDDGLKPELPDAGVPVATIWGAASESDRCRARDRAAHVREVLTGYRSGSARTASAAEPRAAYGSNVSRTERISAKARELHIGFRTVERWVADYLRDGEAGLLSGHAARIAAEATRFAVFERIALDIMIEHTDSSRPSKQHIIAQARARITATYGRGCVPLPERTRAYEILETLELRHPIFHHSSKRNRDIAARPIQAYGMLHPARPGEYVLMDTTRLDVFAMDPQTLRWTSVELTVAMDWYSRCITGLRLTPGSAKAFDAATVLYQCLRPAPAGRDWPTEAVWPPHGIPKSVLIDVEALDAGGVFAASPAIVPETVVVDHGRIYVGEALTSACRQAGISIQPARIRTGRDKGPVERFFRTVREGFLQELPGYKGPDVYSRGLSPESEAYFFLDELEALLREWVACVYHRRPHDGIGEPGLWSLGMSPAQMFEHGIARAGYLQVPRDPDLAYRFLPVVWRTIQHYGVEVNGRVYRGSVLVDYVSRKSPFTEQKGKWPFQVNPDDIRQIFFFDLHHTRTWHPLLWTHASLLTAPMNEDGLAFARRLAQARHPVFDDKLALAELLERRNLSPGRSPAERRAALRVCREQSSLETDLAAAISVSALPTAQRVLAGIDPAQAAAEEAASIVDDLDDVPFAVTDGVYDDTLEDL
>NZ_CP032155.1|WP_149378273.1|1273192_1274329_+|AAA-family-ATPase
MSAKAAAPPPVSHLDNLTLARKEGWGDFVHARPRVRPELLSKSQIRGLGEGGADEYNRRRMEWHNNLGPFKTPMLASVHEALWDIVDCNEQDGQHAKGSVAIDGYPGLGKSCAVEEFAKKYHQREVARYGDFTRAGDERWPVCRVGLRGNTSMKDFNTALCDFYAHPGRRRATTTQLGKWALDCVLSCETRLLIVDDVHFLHWQQHGGIEISNHFKYIANDFPVTLLLIGVGLGERGILMEGPAYEDAVLAQTLRRTTTLDMRPYAVNTDRARRQWRTLLSTVEERLILANKRPGMLTDGEMLDYLFIRSTGHIGSLMELIRRGCARAIRTGTESLTRTVLDSFRIDSAAERARAELEIAFRARRLSVQPKTARAGVS

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Crispr_ID: NZ_CP032155_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_4

2030233-2030330

Orphan

Consensus_repeat	Method
AATCTCGCTGGTGCCCTCGAAGATGG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP032155_4

>merge|NZ_CP032155|4|2030233-2030330|CRISPRCasFinder
AATCTCGCTGGTGCCCTCGAAGATGGAGCGCTGCGGTCCGACTACACCGGATCGGTCGGTCAGCTTGGAGTCAATCTCGCTGGTGCCCTCGAAGATGG

>NZ_CP032155|4|4|2030233-2030330|CRISPRCasFinder
AATCTCGCTGGTGCCCTCGAAGATGG	AGCGCTGCGGTCCGACTACACCGGATCGGTCGGTCAGCTTGGAGTC
AATCTCGCTGGTGCCCTCGAAGATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149378811.1\|2033468_2034269_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224098
NZ_CP032155.1\|WP_149378815.1\|2037512_2038256_+\|DUF1906-domain-containing-protein	unknown	unknown	gnl\|CDD\|378098
NZ_CP032155.1\|WP_149378806.1\|2026280_2028017_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP032155.1\|WP_149378803.1\|2023535_2024273_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|379263
NZ_CP032155.1\|WP_115320853.1\|2028043_2028691_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP032155.1\|WP_149378813.1\|2035098_2036292_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270306
NZ_CP032155.1\|WP_149378818.1\|2048890_2049187_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|378968
NZ_CP032155.1\|WP_149378809.1\|2031686_2032106_+\|cation-transport-regulator-ChaB	unknown	unknown	gnl\|CDD\|377614
NZ_CP032155.1\|WP_149378810.1\|2032106_2033402_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP032155.1\|WP_149378802.1\|2022857_2023061_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|225458
NZ_CP032155.1\|WP_149378801.1\|2021897_2022200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149378805.1\|2025365_2026253_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP032155.1\|WP_149378817.1\|2048516_2048906_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP032155.1\|WP_149383437.1\|2022253_2022847_+\|fatty-acid--CoA-ligase	unknown	unknown	unknown
NZ_CP032155.1\|WP_149378816.1\|2048120_2048513_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_CP032155.1\|WP_149378814.1\|2036307_2037339_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP032155.1\|WP_149378804.1\|2024355_2025345_+\|NAD(P)H-nitroreductase	unknown	unknown	gnl\|CDD\|236122
NZ_CP032155.1\|WP_149383438.1\|2029666_2029882_-\|DUF1876-family-protein	unknown	unknown	gnl\|CDD\|378103
NZ_CP032155.1\|WP_149378812.1\|2034268_2035120_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|224097
NZ_CP032155.1\|WP_149378807.1\|2028724_2029594_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149378815.1\|2037512_2038256_+\|DUF1906-domain-containing-protein	gnl\|CDD\|378098	pfam08924, DUF1906, Domain of unknown function (DUF1906). This domain is found in a set of uncharacterized hypothetical bacterial proteins.	3.28342e-59
NZ_CP032155.1\|WP_149378806.1\|2026280_2028017_-\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.85618e-40
NZ_CP032155.1\|WP_115320853.1\|2028043_2028691_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.99483e-66
NZ_CP032155.1\|WP_149378813.1\|2035098_2036292_-\|extracellular-solute-binding-protein	gnl\|CDD\|270306	cd13588, PBP2_polyamine_1, The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that functions as the primary high-affinity receptor of an uncharactertized ABC-type polyamine transport system. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.56671e-104
NZ_CP032155.1\|WP_149378818.1\|2048890_2049187_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	9.52457e-17
NZ_CP032155.1\|WP_149378809.1\|2031686_2032106_+\|cation-transport-regulator-ChaB	gnl\|CDD\|377614	pfam06150, ChaB, ChaB. This family of proteins contain a conserved 60 residue region. This protein is known as ChaB in E. coli and is found next to ChaA which is a cation transporter protein. ChaB may be regulate ChaA function in some way.	3.96747e-17
NZ_CP032155.1\|WP_149378810.1\|2032106_2033402_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.09666e-25
NZ_CP032155.1\|WP_149378802.1\|2022857_2023061_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|225458	COG2906, Bfd, Bacterioferritin-associated ferredoxin [Inorganic ion transport and metabolism].	2.3e-12
NZ_CP032155.1\|WP_149378811.1\|2033468_2034269_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.92436e-71
NZ_CP032155.1\|WP_149378805.1\|2025365_2026253_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	6.69851e-29
NZ_CP032155.1\|WP_149378817.1\|2048516_2048906_-\|VOC-family-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	6.14098e-50
NZ_CP032155.1\|WP_149378803.1\|2023535_2024273_+\|SDR-family-oxidoreductase	gnl\|CDD\|379263	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase.	6.73852e-69
NZ_CP032155.1\|WP_149378816.1\|2048120_2048513_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	6.80903e-46
NZ_CP032155.1\|WP_149378814.1\|2036307_2037339_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.02982e-152
NZ_CP032155.1\|WP_149378804.1\|2024355_2025345_+\|NAD(P)H-nitroreductase	gnl\|CDD\|236122	PRK07877, PRK07877, Rv1355c family protein.	2.15005e-17
NZ_CP032155.1\|WP_149383438.1\|2029666_2029882_-\|DUF1876-family-protein	gnl\|CDD\|378103	pfam08962, DUF1876, Domain of unknown function (DUF1876). This domain is found in a set of hypothetical bacterial proteins.	1.95765e-12
NZ_CP032155.1\|WP_149378812.1\|2034268_2035120_-\|ABC-transporter-permease-subunit	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	8.01749e-59
NZ_CP032155.1\|WP_149378807.1\|2028724_2029594_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	6.79839e-18

>NZ_CP032155.1|WP_149383438.1|2029666_2029882_-|DUF1876-family-protein
MAVDEDADRTRATALLSWRSTALVGMGIARMDAGTEHAVELRDEVAVARALSNLASQLFATSMSEIEAAAG
>NZ_CP032155.1|WP_149378807.1|2028724_2029594_-|universal-stress-protein
MPESFTPPSIVVGIDGSRGAVRAALWAIDEAVSRDIPLRLVYAIHPSGPDPVDPQEEARLLAGAELAVRSAADAVEATGRQVKLEVEILQSRPIATLVEASRVAAMICVGEVGLKHFDADRIGSTATALVTAAHCPVAIVRGEDPIGGHEPGWIVVELDESPESAAVLQFGVAEARLRGAPLRVLGSWQSRYTDVHDSHAVSDGNRMVRAQLDRRLSHWKNQYPDLDARPVAIHGNALNYLAKNAASIQLVVVGARNARGIEELLGPTGSAALHNTDCSVLVVDRQRLL
>NZ_CP032155.1|WP_115320853.1|2028043_2028691_-|response-regulator-transcription-factor
MVKVFLVDDHEVVRRGLIDLLSADPDLEVIGEAGSVAHALAQIPALNPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLMLTSFTSDEAMLDAILAGASGYVVKDIKGMELAEAIKDVGAGRSLLDNRAAAALMAKLRGAAERSDPLSGLTEQERVLLGLLGEGLTNKQIAARMFLAEKTVKNYVSRLLAKLGMERRTQAAVFISKLDHNQRSQE
>NZ_CP032155.1|WP_149378806.1|2026280_2028017_-|GAF-domain-containing-protein
MRAVTDNVGPNGNRKAASPLRDTLSGLRLRELLVEVQDRVEQIVEGRDRLDGLVEAMLVVTSGLELDITLKTIVHTAIDLVDARYGALGVRGHDHELVEFIYEGIDAETHELIGPLPSGRGVLGHLIDEPKPIRLDNITQHPASVGFPPNHPPMRTFLGVPVRIRDEVYGNLYLTDKADGQPFSEDDEVLVEALAAAAGIAIDNARLYEQSRTRQSWIEATRDIGTELLGGADPAQVFRLIADEALKLTSADVVLVAVPSDIQLPVDQVEELLVVETAGKVGQPGSLPPITVRDSVIGHAFAEKAPQRFTDISDELPAIPGIGPALVLPLRTTDTVAGVVVILRRLGRQTFSHEQLDMMAGFADQATLAWQLASTQRHLRELDVLSDRDRIARDLHDHVIQRLFAIGLSLQGTIPRSRLPEVRQRLTSSVDDLQEVIQEIRTAIFDLHGGSVGATTQLRQRLDDAVNGFAGSGPRIAIQYVGPLSVVEAGLADHAEAVVREAVSNAVRHADAQSLSVTVRVEDELAIEVVDDGRGMPAEVNPSGLINLRRRAYEVGGDFTVDNAEGGGTVLRWSAPLP
>NZ_CP032155.1|WP_149378805.1|2025365_2026253_+|universal-stress-protein
MSTTATKYDIVVGVDGSPESKVAVDWAARDAALRGGQLHLVHVLSSPAVMTFPEVPVPSGYFQWQEDSAREILAGAAETVAAATKDDPVKVTSEIVSGSPVPTLADLSKDAQLIVVGCRGRGALARSLLGSVSTGLVHHAHCPVAIIHDEDPLTARPSKAPVVVGVDGSPASERALEIAFEQASLRGVELVAVHAWSDTGVFEFPGLDWSALRSIAEETLAERLAGWQERYPDVVVHRLVVADRPAQQLIEQSESAQLTVLGSHGRGGFAGMLLGSVSTAVVHGSRQPVIVARSS
>NZ_CP032155.1|WP_149378804.1|2024355_2025345_+|NAD(P)H-nitroreductase
MSVPFPEPETIRTVLSLAMRAPSVHNSQPWHWQVGPSSLHLYVDSSRHLPNTDPDRRDMLVSCGAALHHCTVALAALGWQAKVRRFPDPADSAHLASIEVQPFAAGELDVTLAAAISRRRTDRRNFSSWPVPGGDIALMGARAARAGVMLRQLDLLPHLTEIVARSVSRHAADVDYLSELSAWSGRYGSLAGVPAHNTPAPDQHATLPARVFAGPILAQPSETPAAEDNGVLLALGTETDDDLARLRAGEATSLVLLSATAMGLATCPVTEPLEIKETREAVREDVFGTSGYPQMLVRVGWAAVNADPLPATPRRPFSEVVGGLDSRVA
>NZ_CP032155.1|WP_149378803.1|2023535_2024273_+|SDR-family-oxidoreductase
MSGVIVTGAASGIGRASAEALIADGRRVALWDIAPAVAEVAEGLGMPHSVIDVCDGVALSAAVDAAAAAMDGIDGLVHAAGRVIPEPVGAFTEESWDAVLDVNLRAQAILSQLLLPHLQEAARAGAAPAIVGISSIEGLTANPFIPAYCASKAGLLGLTRSMAAQLGPDGIRVNAVCPGFIRTPMLQIALDVDEVREGFEAAAPIGRLGNPEEVGAAVAFLMSPKASFITGAHLVVDGGVTSRHP
>NZ_CP032155.1|WP_149378802.1|2022857_2023061_+|(2Fe-2S)-binding-protein
MFVCLCNGVTSQVVAEAVEAGATTTKQVANACGAGAECGRCRRTVRAIIGAADSAERKRHNGFLPKG
>NZ_CP032155.1|WP_149383437.1|2022253_2022847_+|fatty-acid--CoA-ligase
MDYRVPDPSRVWPVLQRSESALAGLGAHYVLVYTSTREHGRVMVTISLRSKEPILEVLRSRVFLNWFDAVGLDDIPAIFAGETVDKVTLVEPSEETPPGVIVGAIAAVDDVSAMIGRVHQGLPRFEAAGVRAVRIFKAFDDDHEVMILQELDDEADASDWVNHPDVAAEWMGHTGVGAYPPVFVGRLQHIMRLDENG
>NZ_CP032155.1|WP_149378801.1|2021897_2022200_+|hypothetical-protein
MIKTGTRLQSQVCDTQVIVVRSSDSLDDLRAGGVPMIPLDGEKTEGVQLDPDFSGGTVMGKRYVDADGAELLVTKAGAGSLSVGTTPLEQKTAKPLPASD
>NZ_CP032155.1|WP_149378809.1|2031686_2032106_+|cation-transport-regulator-ChaB
MPKTTKSGDAKKSELPSTLKKSDAKAQRTFAKAHDAAAEEYGEGERAHRVAYSALKHSYEKVGDHWEAKTSKGPSDSRARSGGPNPTGTSAEGVDANASKKHLLDVARRLDISGRSSMNKGELVDAIMKANRRESARNR
>NZ_CP032155.1|WP_149378810.1|2032106_2033402_-|MFS-transporter
MRAWIVWSTGTLAYVVAVLDRTTLGVSGLDAAKRFSASPGVLSTFVVLQVIVYASAQIPAGLLLDRFGSKKMILTGATLMVAGQLVLAVTVSLPTAIAARAVVGLGDAFTFISVLRLVPHWFTPRQIPLVTQLTGISGQLGQVLSAVPFMSLLIGSGWTRAYLAVAAFGVLSLVLTLALVKNTPPGVTVHDPVVSVRETLASVKTIWMRPGTRLGFFTHMGTQFSVTVFALMWGVPYLTVAQNLSRGEAGTLLTISVVAAIVFGVLIGIITGRHPHRRSWIVLGIVVSNALIWTVVLALPHAAPHWLLVVLIVVISFGGPGSMVGFDFARTFNPRSTLGTAQGAVNMGGFLASLLVMQAMGVIIGAAGGYSFESFRLAWCVQYAVWAFAIAGILITRRKARRTIGQIEESRYLLEFFSDSEPAPATPRGDG
>NZ_CP032155.1|WP_149378811.1|2033468_2034269_-|ABC-transporter-permease-subunit
MLSPTLRRLVRIWTLFVLVFLYAPLLLVVVNAFNASKTFAFPPSGFTLRWWSDAWASDGMWHSLANSVVVGLCATVLALLLGSMAAFAVQRYEFFGRQTISFLVVLPITLPGIVTGIALNATFTSALGMTLGLATVIVGHATFCIVIVFNNTQARLRRLGTGLEDASADLGASGWQTFRYVTFPMMRGALVAGAILAFALSFDEIVVTTFTAGPTVQTLPIWIFGNLFRPNQAPVINVVAATLTVLAIIPVWLAQRFGGDPASTRV
>NZ_CP032155.1|WP_149378812.1|2034268_2035120_-|ABC-transporter-permease-subunit
MAADQGLSHGVSRRLRLAFLLVPPLAWLVVAYLGSLGVLLISAFWSTDTFTGAVVRSYTSDNIVRVVTDAVFRTATLRTVGIALSVTAICIVLAVPLGLYMAKVASPRVRLALVVAVTTPLWASYLVKAYAWRMLLSPEGPLHWVAGYTPGYGLIATVLTLAYLWLPYMVIPVFAAFERVPDPLIDASSDLGASDLTTLRTIVAPLVFPGIAAGSIFTFSLSMGDYIAVTIVGGKTQMLGNIIYGQLVTANNQPLAAALSLIPLAAIVLYLLAMRRTGALENV
>NZ_CP032155.1|WP_149378813.1|2035098_2036292_-|extracellular-solute-binding-protein
MRTTTRRLGVTLAVCAALVAACSSSNNSGGGGTTAPPKMEPMSALGNGEGQLNLIAWPGYAEDGSNDPKVDWVHPFEQKTGCKVNVKIGNTSDEMLQLMRTGQYDGVSASGDATLRLIYAGDVAPVNTKLVPNYETISSFLKDKPWNSVNGQMYGIPHGWGANLLMYNTDVVKGAPDSWGAVFPGAPEYKGKVTAYDSPIYIADAALYLSKTKPELGIKNPYALTEDQLNAAVDLLKAQHGNIGEYWSDYTKAVQAFESGTSAIGTTWQVIANMITSDNKVKIATVLPKEGATGWSDTWMVSSKAKNPNCMYQWMDWITSPQVNAQVAEYFGEAPAQTKACEFTSDKTFCDTYHATDSAYAEKISYWTTPQKQCVDGSGDNCTAYSEWVDKWQQIKG
>NZ_CP032155.1|WP_149378814.1|2036307_2037339_-|ATP-binding-cassette-domain-containing-protein
MPSAPSRAPQIELRGVRKVFGEVTAVEGADLTVADGELFAILGPSGSGKTTVLRMIAGFEQPTAGTVHLGGADVTALPPAKRDTNTVFQDYALFPHMTVAQNVEYGLKVKGVPKAERRERTAAALDMVRLSGHAARKPAQLSGGQQQRVALARALVGRPKVLLLDEPLGALDLKLREQMQVELKAIQREVGITFVIVTHDQDEALTLCDRLAVFNEGRIEQVGAAREVYENPANRFVADFVGTSNVVDGATAEALVGRAGTVAIRPERIAVLAPDESVPAGMRSVTAQVAEVVYAGPITRVAVDASGVGLTATLLSAEASTDLAHGATVVLAWPDSAVRSLSA
>NZ_CP032155.1|WP_149378815.1|2037512_2038256_+|DUF1906-domain-containing-protein
MSMSRRDVLKLAAATPAALGLGTLASTLAASVASAEPAAAATGSLGVLLDYAAGVISARDLKASGAVGAIRYVSDRRPGGDWMLGKPIQLTEARDLYQAGLKIVSNYQFGKQDTADWLGGQQAGLIHAKRGWQLHTAAGGPVAAPIYVSIDDNPTPDQYKTQVAPYLRAWESVLGHQRVGVYGNSKVIDWALQDGLGSWFWQHNWGSPKGYTHPAAHLHQVEIDQRKVAGVGVDLNNILKPQFGQWD
>NZ_CP032155.1|WP_149378816.1|2048120_2048513_+|holo-ACP-synthase
MPIVGVGIDVVSIPDFAEQVDQPGTVFAETFTPGERRDAADKSSVAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEGIHRDIEVITDMWGRPKVRLTGDIAKHLAEVTIHVSLTHEGDTAAAVAILETA
>NZ_CP032155.1|WP_149378817.1|2048516_2048906_-|VOC-family-protein
MRINLTSVLVDDQDKALRFYTEVLGFTTKHDIPMGEHRWITVVSPEDPDGTELVLEPDSHPAVKPFKEALASDGIPFTSFAVDDVQAEFARLDALGVRFTQEPVDMGPVTTAVLDDTCGNLIQITHQAG
>NZ_CP032155.1|WP_149378818.1|2048890_2049187_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MGDVFKALADPTRRKILDELTDRNGQTLFEICARLATKYGLGSSRQAISQHLEILETAGLVETRRSGRFKYHYIDTAPIAPIVERWLKKAEEPPCEST

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Crispr_ID: NZ_CP032155_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_5

2815190-2815284

Orphan

Consensus_repeat	Method
GGCGAGGGATGGACGACCGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_5

>merge|NZ_CP032155|5|2815190-2815284|CRISPRCasFinder
GGCGAGGGATGGACGACCGCCGCTGCCATTAGCCGCGCGCCGCTGCTCGTGCATACAGCCGCGGCCAGTACCGGCGAGGGATGGACGACCGCCGG

>NZ_CP032155|5|5|2815190-2815284|CRISPRCasFinder
GGCGAGGGATGGACGACCGCCGC	TGCCATTAGCCGCGCGCCGCTGCTCGTGCATACAGCCGCGGCCAGTACC
GGCGAGGGATGGACGACCGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149379411.1\|2822871_2824287_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP032155.1\|WP_149379394.1\|2807404_2807923_+\|DUF4232-domain-containing-protein	unknown	unknown	gnl\|CDD\|379419
NZ_CP032155.1\|WP_168214854.1\|2819796_2820927_-\|DUF2183-domain-containing-protein	unknown	unknown	gnl\|CDD\|227187
NZ_CP032155.1\|WP_149379405.1\|2817779_2818511_+\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_CP032155.1\|WP_149379408.1\|2821070_2821259_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379398.1\|2811265_2811541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379400.1\|2813555_2813849_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379410.1\|2822128_2822818_-\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NZ_CP032155.1\|WP_149379395.1\|2807915_2808401_+\|pyridoxamine-5-phosphate-oxidase	unknown	unknown	gnl\|CDD\|274679
NZ_CP032155.1\|WP_149379397.1\|2809746_2811219_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|132469
NZ_CP032155.1\|WP_149379393.1\|2804244_2804886_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380054
NZ_CP032155.1\|WP_168214853.1\|2813852_2815013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379409.1\|2821285_2822140_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377216
NZ_CP032155.1\|WP_149379412.1\|2824314_2824776_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379403.1\|2816109_2817018_+\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|223856
NZ_CP032155.1\|WP_168214852.1\|2811635_2813021_-\|PE-family-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP032155.1\|WP_149379406.1\|2818527_2819754_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149379404.1\|2817133_2817775_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP032155.1\|WP_149379396.1\|2808397_2809744_-\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|223354
NZ_CP032155.1\|WP_168214851.1\|2804947_2807311_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380078

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149379411.1\|2822871_2824287_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	2.84547e-106
NZ_CP032155.1\|WP_149379394.1\|2807404_2807923_+\|DUF4232-domain-containing-protein	gnl\|CDD\|379419	pfam14016, DUF4232, Protein of unknown function (DUF4232). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 177 and 242 amino acids in length. Many members of this family are lipoproteins.	1.88844e-15
NZ_CP032155.1\|WP_149379395.1\|2807915_2808401_+\|pyridoxamine-5-phosphate-oxidase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	3.29002e-11
NZ_CP032155.1\|WP_149379410.1\|2822128_2822818_-\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	3.27379e-12
NZ_CP032155.1\|WP_149379405.1\|2817779_2818511_+\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	3.72947e-06
NZ_CP032155.1\|WP_149379397.1\|2809746_2811219_-\|amino-acid-permease	gnl\|CDD\|132469	TIGR03428, ureacarb_perm, permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.	7.49683e-47
NZ_CP032155.1\|WP_149379393.1\|2804244_2804886_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380054	pfam17920, TetR_C_16, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. This entry represents the C-terminal domain found in a number of different TetR transcription regulator proteins found in Actinobacteria. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain.	1.4897e-29
NZ_CP032155.1\|WP_149379403.1\|2816109_2817018_+\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	2.62915e-25
NZ_CP032155.1\|WP_168214852.1\|2811635_2813021_-\|PE-family-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.0052773
NZ_CP032155.1\|WP_149379409.1\|2821285_2822140_+\|SAM-dependent-methyltransferase	gnl\|CDD\|377216	pfam04072, LCM, Leucine carboxyl methyltransferase. Family of leucine carboxyl methyltransferases EC:2.1.1.-. This family may need divides a the full alignment contains a significantly shorter mouse sequence.	6.5877e-31
NZ_CP032155.1\|WP_168214854.1\|2819796_2820927_-\|DUF2183-domain-containing-protein	gnl\|CDD\|227187	COG4850, COG4850, Uncharacterized conserved protein [Function unknown].	1.6839e-53
NZ_CP032155.1\|WP_149379404.1\|2817133_2817775_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.66154e-11
NZ_CP032155.1\|WP_149379396.1\|2808397_2809744_-\|FAD-binding-protein	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.31949e-37
NZ_CP032155.1\|WP_168214851.1\|2804947_2807311_+\|hypothetical-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	7.39201e-11

>NZ_CP032155.1|WP_168214853.1|2813852_2815013_-|hypothetical-protein
MLVSVTPAPIMLVGEGTAEHPNGGLLIGNGYSPDPATCGTACNGGNGGWLLGNGGHGANGGSGGSAGLFGSGGRGGGGTSEHIDGGNGGHGGVLMGNGGDGGFGAGGGGDGGRGGNGGIFGGYGGDGGDGGMGSPGSNGGTGGRGGDSGLIGGVGGNGGNGGDGGLGVGIVISNGGGGGAGGNGGLFHGGGDGGQGGDAGTSGAGGQGGRGGNGGAIDGRGGSGGGGGNGSNRGSFKGGQGGTGGSGGIFGVGGGGGDGGTGGGTTGGVSGLGGNGGAGGAGGISGGQGGVGGQGGSATTGTGGQGGSGGSGGAGGIVGGSGGAGGNGGNSNSGSGGNGGSGANGGLGVGGTIAGRGARAGSPPNGGTGGKGGLAGRGGRPGDPAR
>NZ_CP032155.1|WP_149379400.1|2813555_2813849_+|hypothetical-protein
MSNHHVNLTPQEESLIGESQPEALARMDATQLKDLQSRLRQAREKNFSLLRRQGAARVETEGGRGAAQPANEKRSEKVDIFDEALARVTQRLEHVAE
>NZ_CP032155.1|WP_168214852.1|2811635_2813021_-|PE-family-protein
MINAPATTVFGRPLVGNGAAGTAAHPNGGDGGLLYGNGGAGYSSPTGGISGGNGGSAGLFGTGGVGGAGGAGANGGRGGSGGIISGDGGAGGLGGEAALGINGSNPGSGGAGGSAALFGSGGAGGQGGTGLTGTAAVTPDNGTGATGTTGTSLGYVGGPAGAGDNGTLGQIGGTGGAGYGPNVPLSNASAAGSAGGAGGLGGVGSDAESAGGAGGSGGVGGTGGLLFGSGGAGGRGGTGGTGGTGGTAANGGAGGAGGTAITSSTSDVTVAGGGGGSGGVGGVGGTGGAGGNGGVGGSGGRGGLWFGVGGAAGSGGTGGFGGTGGLAGNGGHGGDGGGAFALSNANESGIGGDGGAGGGGGVGGTGGHGTGGQGGTGGMAGTPGEGGLGGQTGSSGIHGAPGSGGSGGVGGTGGTGGTGGVTAKLPPAPSGDNTPIGPSGNTGVTGTGGGRGAPGQSGPVA
>NZ_CP032155.1|WP_149379398.1|2811265_2811541_-|hypothetical-protein
MNTITGITKLAAYGALLGGIGAAALGIGTGLAQADSPTPVTGTHQLQSVDRGDQEVIPRGHPIPIHGDDSGTHIPGASHPAGATTTTLRGH
>NZ_CP032155.1|WP_149379397.1|2809746_2811219_-|amino-acid-permease
MTQTVAGNEAADEFCEDCGYEPELKRTLNGFQVFAISFASLSVAVGIFATYDDVLRDSGPVGIWLFPIVAIGQILVALVYAQFAARIPLSGSSYAWASRLASPKLGWAFGWLAVLSAVASPVTIDNALASQCLMPLFGMEPSETTARVMTVALLIIQFILAVAATRIVGWVNSLSVGVELAILLVIGVALTIAIMVSGNAAPANLFSRGITEGNPNFWIIGGGLMAASIMGLSTLVGFETASNMAEEAKNPTRTVPRAIIGSVIAASVLGMVFVIILTVSITDMAKVSNTESPVAEIMNQRFGPGFERPLLAAIALAFFGAALVSMVSGARYIYAMSRDGRFPAHKVMGRVNPRTRTPIPATFLVLAVGVVLMAMMPGDALLQLIMAGAIVTILPYLFTIILYLATRHKLDSKPGGFDLGRWEWPVAIGALVWVVISLFVVITTSPGWAPIVLAFGLSAAGGVYFLYMWKFNRSVLEQEPGDPNMFAEVE
>NZ_CP032155.1|WP_149379396.1|2808397_2809744_-|FAD-binding-protein
MTAALTGRVVRPGDIEYNEASRGWNHLFVHRPAVVVFACSTEDVVNALTWARQEGLAVRVRSGGHALEGWSGVDDGVVIDVSGLKSVTIDAESRTATVGAGLNQLEAVTGLGRAGFVAPTGTEGSVGLAGATLGGGFGLLTRNYGMASDNLLAVEIVVASADGGAEVIVADEHNNPDLLWALRGAGNGNFGIVTSLTYRIHPLTQAIFVVATWPGFEDLEAVFESWQQSAPYADRRLTSQLEIEGDKVGLHALLAGGTEAEALQLLSPMLSIGSPDIVVQDAAWPEIYSGFQIPITEEPANWKFASQFMTEPLPSDAVRVIAEFMAKAPVGCNYFTNAFGGALPDSEPSGGSAFAHRGALYYAEPGAGWGVRGGPPASDDQTEAVLAWVAELTEALAPYVNGAYVNVPNAGMPDWERAYWGANVERLRQIKAAYDPANVFSYAQSITA
>NZ_CP032155.1|WP_149379395.1|2807915_2808401_+|pyridoxamine-5-phosphate-oxidase
MNKGELAAELSHPGAQHLLSGAMARLAYNGHDGFPRVIPVGFHWTGERIVVSTAPTSPKARALASRPQVAVTIDGGSSPDEAKALLVRGLATLETVDGVTEEYLTSARNTLSGSELAEFERTVKSTYPQMVRISIDPVWARFYDFGAGRLPKFLSDLMNDG
>NZ_CP032155.1|WP_149379394.1|2807404_2807923_+|DUF4232-domain-containing-protein
MGYLPGAAAVLTAIMAIGSTVASPTASASPACTSDSLALSTGAPGSPGDATQIHFELIVTNISPQLCELNGYPGVDLIGPDDPMWGPDYQLPQQADAAVPITLAPGASASSRLTFLAEPNGWVPDTIAVTLPNAPGRMEVPWIAGRVPVARQDAASHPGTYVGPLHAVASDE
>NZ_CP032155.1|WP_168214851.1|2804947_2807311_+|hypothetical-protein
MISSVVEKNPEARPGHAAERVRVASGATRAMGIVVGLSVVVAVLAIAFALPAARSKPHDLPIGVAGPQAGQIAALLRQNAPGSFRVTTYLDEPELRGAIRGRIEYGGLTLGPAGPVLLTATGASPAVAQTLSQLGNQLKTVIAVPLRTEDLAPPTGRDPRGAGLIASGLPITIAGLLPAIVLVLLLPNRVWLRTVALLIFSATAAVTITAVLLWVVGSLDGNAGGVAAALMLGLSGAGLAVLGLGTLFGRIGLALGSALALLLGNPLSGLASAPEMLPRPWGELGQYLPQGATATLLRSTAFFDGAGAGFATAVLICWAVGGTVLMGIAAVRSAAHRGPTVRRIGGPVVWLGAGAIAVGIGAALAQGSAVANADTGHGGRSDARGSAGPAAPARRGDAVKVTAPKAIRSSVGANRATPAGPVRKALRPRDVLGWLRRELRYTLFNKPPVIAAVQHSEDPVTGVVTGDLHDANGSRGEVTYTITQPGNAVVHVNPDGTFTVTPDATTAHRGGSVSFTATADNGSTYRLPGVLGHIQSVIHYYAQRLGISGPDAASATVTVTVASINKAPTIGGYSDTTSAVDGTVAGQIEATDPNQDNLHFSGPATSAAGGAVTVNSDGSFTYTPTFQIRHAAAADNAPEAAATDSFAVTVDDGYGGSATETITVPVSAANAKPTGGTIADLAVDNVIGVVTGSVIGVTDPDSDPLSYSSNPATTGGGFVDVYGDGSFTYNPTAEQRHLAAALGAPFTVTHDSFVISVADGHGGSTAITVVVPVAPEVDEPPTGVAAG
>NZ_CP032155.1|WP_149379393.1|2804244_2804886_-|TetR-family-transcriptional-regulator
MPSRAAMDKRRGRRHGEPVSRDVVLRAAKNQFARHGYEKTTLRAIADEAHVDPSMVLYLFGSKAELFRESMKLVLDPKLFTDQLTADADDALGFRIVRAYLSIWEQPDTATSMVSMLQSATSNSDAHEAFREFLHSYVMTAVTDALGGADEARLRAMLAATSLVGTAMLRYVMRVPPLSTLTADEVVTLIGPSVQRYLSAPADELGLPATGAD
>NZ_CP032155.1|WP_149379403.1|2816109_2817018_+|cytochrome-c-biogenesis-protein-CcdA
MEHSLMGLAFGAGLVAVLNPCGFAMLPVYMTLVVRGDAAGQLTALRRAGVATIEMVLGFMAVFGAFGLLTVSAAAAVQQYLPYVTVAIGVLLVALGIWSLAGRHLPGLNPVTRSSRWAPTVRGGSMFGYGVGYAIASLSCTIGPFLAVTAASFRSGLIVDGLLTYLVYAAGMSLIVGVLAIAAAFANPIGVYRMRRILPYVNRFGGALVLLVGVYVGYYGVYEIRIFTGTAVSGDPVIAGAGRIQSGLTVWVHGHGGYPWLAALSVLMLSAFAVSWTRRLRRTAQVRRVLRLHSGDLSPSSS
>NZ_CP032155.1|WP_149379404.1|2817133_2817775_+|TetR-family-transcriptional-regulator
MSTPMVEANDGVGLPDITPGDARQRILEATVECFRAYGYEKSSMRLIANTAKVSQTLLHYHFETKEKLFDAAINDVATKLFAAAETQLMPADSVGDGLADAAGLLYTLFIDNLDTVTFVVEFGAAANHNEFLRTAYLEFRDTQRRQFAGLLRSIAGEAAPDHVIDESVRLMEVVLLGMSMQRPFASDQERLRGDFDSFVLMLITRLFEGLASG
>NZ_CP032155.1|WP_149379405.1|2817779_2818511_+|zf-HC2-domain-containing-protein
MTTVDGPSSPGDTHPYALWDAAYVLGSLSSAERRDFEMHLRACPSCVDAISDLSGMPALLGQIDRGYVDSLDDRAGQAGLPPLRDELLARVNARRRRSRTATWMWSAAAALVVGLTVVALQSNPIVVTPAPVQAAALTMTPMRPVPLTATVTLTRRTWGTRIEMQCTYEAGPMDLDYDDGAASDKLAMVAVGRDGSHTQLATWTARIGMPATPGGSTSMSVDDIASVQIVSVDAGTVLLERDL
>NZ_CP032155.1|WP_149379406.1|2818527_2819754_-|hypothetical-protein
MQVSGYFAGGVLALGIGAGLFLGHGVASAAPDAGSSVEKSVTKPAAKSARQAGRPAAARSEHRRPATRQAAHPAPRSIEKTAATTTVTSDVSVTLPPMPVVSGASFTVSADFMKPFATNFVAAGGDPADSARFFFGDLAVKSLDALAEDNISAPQVRSLMGNLAASGYFGGIWLRDNLHATPTSTPAITVPTGVFPGVDLSPSAIGIRLFDAVSAGLTGAAANAPDWVVSAVAHVSVPVLLALYGYNRGYLQVVLEHPPAGVPSMQDTLTCSGFLACNSTAFPLELATRYDSALGKLDAPATPGWSEVSMWTTALQGATSAGRFVWEGLAQAGFSPASYTALVQLSSAYLMVSKAAVLSSMTAYADGDAAIGRSSLRLQAGLWMWSGAYFAGLASSAAPGTIPKVVVA
>NZ_CP032155.1|WP_168214854.1|2819796_2820927_-|DUF2183-domain-containing-protein
MPRLPRRITSDLTAVVAGLEGKLTERRRDLKVQLGAFRGVHVVVYRGYVADDVAKVRVRVMETPELPGDSRIPYWDVAQSNVRRHATLSIVGTEVELRIGAHRATEVTDSHGFANFSLPVPKLRVGWHTAEAVAAGISDEEPAVGTGWVMKPSLAAPYLVISDIDDTILLTGLTEGVAMVARTLLHAVEQRSAIPGMAAFYRGLARGVESRTGSRRAEPTFFYVSTGSWSFYSMLEQFVELRAFPPGPMFLTDWGPTERYLRRSGAEHKRAAVRRLFEAYPRMRFVVIGDSGQRDPLIYEEVAREFPGRVLAAIIRQVGADDDERNASLREHAQTLRDEGIPMHLVADAGQAAELARSLRLCDEDTVAEARAELNG
>NZ_CP032155.1|WP_149379408.1|2821070_2821259_+|hypothetical-protein
MKARITRWLERVGNSLGGADALTPIDPYYGATWTGRVPAMVEGRGMSAGRLPMMAAAHLPVF
>NZ_CP032155.1|WP_149379409.1|2821285_2822140_+|SAM-dependent-methyltransferase
MDSLVSNVSDTARWVTAHRAKESARPDALFRDPLAERLAGQQGHAIIAAAPRSIRDGWWLVARTKIIDDLIAQAISDGCDRVLNLAAGLDTRPYRLDLPAELEWVEADLPALVAEKEQLLADQTPRCRLSRHAVDLADPRARDAFLDEALAGATKAFVLTEGLLMYLDEADVIGLSAAFQRPEIAWWTFDFGSGGIKTTMNDKTDGMMRNAPIKFGPPTGLAFFENLGWSVASAESLLTAARRFRRLPLLLRLAARLPQPDPRNPGDRMWSAAVCVTPPARSGQ
>NZ_CP032155.1|WP_149379410.1|2822128_2822818_-|DUF3298-domain-containing-protein
MRRVTLTTLITAAAIVGAPGVAAAAPTNYCADLKGVDNGQTCDIQQSDPAYQVKISFPSRYPDLKSVADYISQTRDGFLNVAKASNPGDVPFELDITATSYTSTVPPRSSESLVLQNYENIGGAHPDTSFRTFNWDQTSRTPITYDTLWRADADPLKVVYPIVVAELQKQAGQPISVDPVTGMDPASYRDFAITNDGVIFFFSQGQLLPEAAGATQVLVPRSAIGPLLA
>NZ_CP032155.1|WP_149379411.1|2822871_2824287_-|NCS2-family-permease
MNRLDRFFEITARGSSIGAEVRGGLVTFIAMAYIVVLNPIILSGAADVTGHKLGFAQVSATTSLAAGVMTILFGVVARLPFAFAAGLGINSFLATTVVGTITWPEAMGLVVINGLIIVALAVTGLRRLVFDAVPMQLKLAITAGIGLFIMFIGLVDAGFISSTGLPSPPVGLGSGGYGSISTVPTVVFVFTLLLTGILVVRKVRGGILLGLVAGTVVAVIIEAIWHLGPATKNPGGWTLSVPTLSGSPFALPDLSLVGAFSFDSFGRIGVLAAAMLVFTLVFANFFDAMGTFTGLSREAGLADERGNFPRLRSALVVEGAGAVVGGATSASSNTVFIESGAGIEEGAKTGLANLVTGALFLAAMFVGPLAQIVPTEVAAAALVIVGTMMFSQLRHVDVSEFSVALPVVLTVAVMPFSYSIANGIGVGFVTWVVVRSAAGKAREISPLLWIVAAGFVLYFARSGIESLLGVS
>NZ_CP032155.1|WP_149379412.1|2824314_2824776_-|hypothetical-protein
MASGAAVLLIAAPVAHADEAFWGGWYKITFHTDQKSGTSKAATQPEAPYTASFKITTDCSADICTASVLDGPTPKDNAAQSTSFVWTGSQWSRSNSWRWDCALPDGTITYDPAHSVTTYTPQPDGSLAGTFETTIESGACQGTVTIPMTAAPA

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Crispr_ID: NZ_CP032155_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_6

3597965-3598072

Orphan

Consensus_repeat	Method
GCGCGGGCAACCACCGCTGCTGCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_6

>merge|NZ_CP032155|6|3597965-3598072|CRISPRCasFinder
GCGCGGGCAACCACCGCTGCTGCCCGTTGGCCAGGGTCCGCTCGCGGAACCGGTTCCCCGGGTTCGACCCCGGGTCGCCCGCGCGCGGGCAACCACCGCTGCTGCCCG

>NZ_CP032155|6|6|3597965-3598072|CRISPRCasFinder
GCGCGGGCAACCACCGCTGCTGCCCG	TTGGCCAGGGTCCGCTCGCGGAACCGGTTCCCCGGGTTCGACCCCGGGTCGCCCGC
GCGCGGGCAACCACCGCTGCTGCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149380052.1\|3613959_3615144_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|238383
NZ_CP032155.1\|WP_149380045.1\|3600411_3603195_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225190
NZ_CP032155.1\|WP_149380043.1\|3598407_3599508_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226757
NZ_CP032155.1\|WP_149380033.1\|3589098_3589824_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP032155.1\|WP_149380048.1\|3608085_3608388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380044.1\|3599500_3600415_-\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|224224
NZ_CP032155.1\|WP_149380035.1\|3590795_3591272_+\|SnoaL-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379275
NZ_CP032155.1\|WP_149380041.1\|3596881_3597349_+\|MerR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP032155.1\|WP_149380047.1\|3607117_3608044_-\|DUF389-domain-containing-protein	unknown	unknown	gnl\|CDD\|377221
NZ_CP032155.1\|WP_149380036.1\|3591268_3592045_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235975
NZ_CP032155.1\|WP_149380051.1\|3613373_3613865_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP032155.1\|WP_149380039.1\|3595696_3596281_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380038.1\|3594335_3595568_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP032155.1\|WP_149380046.1\|3603136_3606511_-\|transglutaminase-family-protein	unknown	unknown	gnl\|CDD\|378297
NZ_CP032155.1\|WP_149380037.1\|3593408_3594248_-\|DUF3097-family-protein	unknown	unknown	gnl\|CDD\|378628
NZ_CP032155.1\|WP_149380034.1\|3589929_3590784_+\|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_CP032155.1\|WP_168215083.1\|3611310_3611739_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283157
NZ_CP032155.1\|WP_149380040.1\|3596277_3596778_+\|flavodoxin	unknown	unknown	gnl\|CDD\|372273
NZ_CP032155.1\|WP_149380049.1\|3608413_3611314_-\|MMPL-family-RND-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP032155.1\|WP_115319687.1\|3592045_3593257_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149380052.1\|3613959_3615144_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	1.4821e-174
NZ_CP032155.1\|WP_149380043.1\|3598407_3599508_-\|hypothetical-protein	gnl\|CDD\|226757	COG4307, COG4307, Uncharacterized protein conserved in bacteria [Function unknown].	2.33498e-168
NZ_CP032155.1\|WP_149380033.1\|3589098_3589824_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.00941e-27
NZ_CP032155.1\|WP_149380051.1\|3613373_3613865_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	4.8806e-25
NZ_CP032155.1\|WP_149380044.1\|3599500_3600415_-\|transglutaminase-family-protein	gnl\|CDD\|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	3.71133e-50
NZ_CP032155.1\|WP_149380035.1\|3590795_3591272_+\|SnoaL-like-domain-containing-protein	gnl\|CDD\|379275	pfam13577, SnoaL_4, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.13313e-20
NZ_CP032155.1\|WP_149380041.1\|3596881_3597349_+\|MerR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.98355e-31
NZ_CP032155.1\|WP_149380047.1\|3607117_3608044_-\|DUF389-domain-containing-protein	gnl\|CDD\|377221	pfam04087, DUF389, Domain of unknown function (DUF389). Family of hypothetical bacterial proteins with an undetermined function.	4.34887e-34
NZ_CP032155.1\|WP_149380036.1\|3591268_3592045_+\|SDR-family-oxidoreductase	gnl\|CDD\|235975	PRK07231, FabG-like, SDR family oxidoreductase.	4.92537e-59
NZ_CP032155.1\|WP_149380045.1\|3600411_3603195_-\|hypothetical-protein	gnl\|CDD\|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	2.18961e-180
NZ_CP032155.1\|WP_149380038.1\|3594335_3595568_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.39279e-53
NZ_CP032155.1\|WP_149380046.1\|3603136_3606511_-\|transglutaminase-family-protein	gnl\|CDD\|378297	pfam09899, DUF2126, Putative amidoligase enzyme (DUF2126). Members of this family of bacterial domains are predominantly found in transglutaminase and transglutaminase-like proteins. Their exact function is, as yet, unknown, but they are likely to act as amidoligase enzymes Protein in this family are found in conserved gene neighborhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes).	0
NZ_CP032155.1\|WP_149380037.1\|3593408_3594248_-\|DUF3097-family-protein	gnl\|CDD\|378628	pfam11296, DUF3097, Protein of unknown function (DUF3097). This family of proteins with unknown function appears to be restricted to Actinobacteria.	7.37824e-158
NZ_CP032155.1\|WP_149380034.1\|3589929_3590784_+\|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	8.0838e-75
NZ_CP032155.1\|WP_168215083.1\|3611310_3611739_-\|hypothetical-protein	gnl\|CDD\|283157	pfam05423, Mycobact_memb, Mycobacterium membrane protein. This family contains several membrane proteins from Mycobacterium species.	2.25512e-63
NZ_CP032155.1\|WP_149380040.1\|3596277_3596778_+\|flavodoxin	gnl\|CDD\|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	2.31577e-17
NZ_CP032155.1\|WP_149380049.1\|3608413_3611314_-\|MMPL-family-RND-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	0
NZ_CP032155.1\|WP_115319687.1\|3592045_3593257_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.75051e-121

>NZ_CP032155.1|WP_149380041.1|3596881_3597349_+|MerR-family-DNA-binding-transcriptional-regulator
MPTTPLTRDLTIQEVSRQSGLTESALRYYERIGLIDPVPRDDSSGHRRYPPALVDAIESLSCLRSTGMSVQNMRAYVDNIRRGMAAAADQRQLFDDHARRLADDIARLQVRQKYAAAKAQLWAARERGDIAAEEAVVPDIIALGAQLISEEKTHA
>NZ_CP032155.1|WP_149380040.1|3596277_3596778_+|flavodoxin
MKRVLVAYGSTRGGTAKLAAMIGEALTEAGLTAVVMPARDVMGLADVDAVIVAGALYANRWHRDARRFVRRHSSPLRDLPVWLVSSGPLDDSAARGVIAPTRQVAKLIERVGARGHQTFGGSLATDARGFPASAMARTRAGDWTDVDHVRRWVATIAQQLVSADAS
>NZ_CP032155.1|WP_149380039.1|3595696_3596281_+|hypothetical-protein
MTTGTDSTLIDQAMPRYDVTIAESTVVQADSDTTYRATRSLDLLRVHTPLLDAAMWVRQLPMRLTGHAAPPSSPVVVGDGLGIPGWLVLGEREGHEIVLGAVGRFWRPVIDWRTVDADEFGHFTEPGWGKIAAGFSILPHGSSETLVTYECRTATTDPASRRSFARYWWLVRPFVGHIMRATLHQIKNDAEGVR
>NZ_CP032155.1|WP_149380038.1|3594335_3595568_+|serine-hydrolase
MVLKVAVSPDMMGGDVDEGYGKVADAFRANLASGKEIGAAVAVYRDGIKVVDLWGGYRDGTARAPWQADTMVNMFSTTKGVTAMAFAVAVSKGLLSYDARVADYWPEFAQSGKGGVTVRQLLAHQAGLCALTPAPSLADVADPDRLAPILARQAPAWRPGTRHGYHAITLGWYQSELIRRTDPAGRTVGRFLADEIATPLGLDLHIGLPAEVDRSRVAHLHQWKRAESLLHLNVMPAGFALAALNPVGLAARATGVPSDVKPWDGDYNRDEVRAVEMPSSNGIGTARAVARLYGAAAAGGADLGLTGAVLDDLAGPAPTPSGGIRDRVMNVKILYSLGFCKPVPAVQFGSSDKAFGTPGFGGSFGFADPDTGIGFGYVMNRLGFHLASDPRELALRQAVFRDVLGARPQS
>NZ_CP032155.1|WP_149380037.1|3593408_3594248_-|DUF3097-family-protein
MADRYGADVLSNNPHRSNRTRSTEQAVELGMVVEDPQSGFVGAVVGVEGPRVELEDRNGKRRVFPLGPGFLYEGRPVILTGLRRQAPAAAQRTKSGSVKVADTRAKVALASRIYVEGRHDAELVEQVWGEDLRVEGVVVEYLGGVDDLAGIVADFRPGPGRRLGVLVDHLVTGSKEARIADAVRRGPGGEHTLVVGHPYVDIWQAVKPERVGLSAWPSIPRDVEWKHGICAALRWPHNNQADIARAWQRIRSSVRDWTDLEPELIGRVEELIDFVTQPA
>NZ_CP032155.1|WP_115319687.1|3592045_3593257_-|acyl-CoA-dehydrogenase
MTFSLELPEEVVTVRDWVHQFAADVVRPAAAEWDEREETPWPLIQEAAKVGLYTPELFAEMSVEPSGLGMITVFEELFWGDAGIALSILGTGLAAASLAANGTPEQLGHWLPEMFGTPGDPHLAAFCSSEPGAGSDVGAVRTRARYEQATDEWVLDGTKTWATNGGIANVHIVVASVYPELGTRGQATFIIPPNTPGFSQGQKFKKHGIRASHTAEVVLENVRVPGNLILGGMEKFEQRIARAREGKRTSGQAAMATFERTRPAVGAMALGVARAAYEYALEYSCQREQFGRPIGDFQGTGFKLADMKSRIDASRLLIWRAGWMMRNNKPFASAEGSMAKLFASETAVYVTDEAIQILGGNGYTRDYPVERMHRDAKIFTIFEGTSEIQRLVIARALTGLPLR
>NZ_CP032155.1|WP_149380036.1|3591268_3592045_+|SDR-family-oxidoreductase
MSGALEGKVALVTGAGAGIGAGIARRFADEGARVVVAEFDSTAGTSVAEEIGGLFVATDVSQRDQVENAVAAAVTEYGSIDVLVNNAWGGGGIGRVENKTDDELAHGLAVGYYGPFWAMRKAFGHMKQRGWGRVINMCSLNGVNAHIGSLEYNAAKEALRTLTRTAAREWAPTGVTVNAICPAAKSQAFLAVAAQHPEIAAIADAANPMGRMGDPYDDIAPIAVFLASEGSRYLTGNTLFADGGSHINGVAWAPDLGD
>NZ_CP032155.1|WP_149380035.1|3590795_3591272_+|SnoaL-like-domain-containing-protein
MSDTLESLARRVKTLEDERDIARLIASYGPLVDSGDPDAVAALWAVDGGYDTGDWQMSSRDDVAAMVRSEEHRGLIARGCCHFFGPPAVTVDGDEAVAICQSMLLVRRESRGFAVARAGVHLIRLQRADHGWEIVSRTARQLDGSGQAMTLIAEGLAR
>NZ_CP032155.1|WP_149380034.1|3589929_3590784_+|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase
MRIGLSTPMVMQLPGVSSAWETTAGVDDLAHIARTADELGFDHLTCAEHIAVPVGDGAQRGLTYWDPLSTFGFLAAHTTRISLTTSVVVLGYHHPLDIAKRFGTLDRLSGGRLVLGVGVGSLAEEFDLLGASFDDRGERADDAIRALRASLSTTRPSYRGSHYAFDGFAVEPCAVQERVPILVGGRTLRSLRRAIRLADGWIPFGLTTTEIDAMLAKENVPPGFEVVLSTGRAVDPIADADRTVKRLIALRDVGATAITCSVSADSPEHYCDQLAALRDLAGEL
>NZ_CP032155.1|WP_149380033.1|3589098_3589824_-|helix-turn-helix-domain-containing-protein
MTAALTDTAPASMLDRFTAIIDAFDDTSAGLTLDQIAARAHLPRSTTHRILDQLVRLQWLTHSGRGYRLGARTSAWGTGDSADVRLRSVAAPVLHELQVRTGAVVHLGLLDRGEVVHLDKLGGPSARQVPTSVGVRIPAHRVALGVAALAGLSPEDVVAELSYVQGWEPDATWWGELHKVRRRVVVRHGDYAGPMVSVAATVGSRAAIGLVTSDRVLAQRCQPLVAASAARIARSLAGATN
>NZ_CP032155.1|WP_149380043.1|3598407_3599508_-|hypothetical-protein
MRDFICPNCGQHLAFENSVCLSCGSSVGFSLDDMAFLVIASGEESEHGGAVDAADFQLCANLHLAECNWLVRVEPVRLLCASCRLTRTRPNDNDLPALGAFALAERAKRRLIAELHELKLPIVGRDEDPEYGLAFDLLSSANEKVFTGHDNGLITLDLAEGDDVHREQLRTSMDEPYRTLLGHFRHEVGHYYFYRLVGTSPTYLERFNELFGDPDADYQAALDRHYSEGAPPGWEENYVSSYATMHAAEDWAETFAHYLHIRDTLDTAAAFGIAPANATYERRVLGPSGFDNILEMWLPLAWSLNMVNRSMGKDDLYPFVLPVPVLEKMRFIHTVIDEVTSSPTKLDAAISGQQQQQSWAPTSLPR
>NZ_CP032155.1|WP_149380044.1|3599500_3600415_-|transglutaminase-family-protein
MTAGESAARTYRITHRTAYGYSDVVTSSYGRGHLTPRDTTGQRCLSYELDIDPIPADRSTSLDVYGNISSYFHVTEHHRALTVTSRSVVEVDPPAAEHYQAGWALAPWEAVRPVGHNGALASEFSLDLRPPEITDEVREYAAPSFEPGRPLVEVLRDLNSRIFSDFTYKSGSTTVSTQVGQVLVAREGVCQDFARLAIACLRANGLAASYVSGYLATDPPPGKERMYGVDATHAWAAVWTPQNDWLGLDPTNDQLVDERYITVGWGRDYADIPPLRGIIYTDSERSVIDVSVDVAPYDGGLAHA
>NZ_CP032155.1|WP_149380045.1|3600411_3603195_-|hypothetical-protein
MSVRRGSSTCDGPAQCCRTDGDHRPEYARGGPCVRRSLESGGGPLSLSAAGSGLSRSSHDPDRLLAGYRAARAQDALFDLHGGGAGAFGDTGYDEFVDATGAIRPSWQELGDLIGERGRAGLERLRGVVRGLVDNDGITYIEVDDSGAAPGEGIATPGTWHLDAIPLVVSAADWETLEAGVLQRSRLLDAVLTDLYGERRAITTGILPPQLLFGHPGYIRAARGIENPGRHQLFMLGCDVSRAADGRFVVNADWAQAPSGAGYALADRRVVAHAVPDVYERIGPRPASPFAQALRLALIEAAPEAAEDPVVVVLSPGIHSETAFDQAYLASVLGFPLVESADLVVRDGKLLMRSLGTLKRVDVVLRRVDADYADPLDLRPDSRLGVVGLVEVQRRGAVTVVNTLGAGILESPGLQRFLPQLAERLLGEKPLLDTPQLYWGGFDRERSHLVARLNTLLIKSTVGGETIVGPALSAQQRQELTARIEAHPWQWVGQELPQFSSAPTDRYPGGVSAASVGMRLFTVSQRGGYAPMIGGLGYVLAPGNSAYVLKTIAAKDVWIRPPTRAKADTLTVPPVELPSGTRSVSSPRVLSDLFWMGRYGERAENLARLLIVTRERYHEYRYRQDMDGSECVPVLLHALGVVTGTETDAAGTYAEAVSGAQRTLWSLTVDRQRPGSLAHSVERLGLAARSVRDQMSNDTWMVLGAVERALAEQAGSPRGARIDDTQLALAQQQTLAGMLALSGVAAESMVRDAGWTLMDIGKRIERGLALSALLRATLTTVRSPDAEQTITESALVVCESSVIYRRRNLGRVSVAAVADLVLFDPENPRSLVYQLERLRSNLRLLPGSSGSSRPERLVDEISTRLRRLDPAELEHVDDDGRRSELDGLLSGMHTALRDLSDVITRTQLSLPGGMQPLWGPDQLRVMP
>NZ_CP032155.1|WP_149380046.1|3603136_3606511_-|transglutaminase-family-protein
MGIKVALEHRTTYTFDRLVEVHPHVVRLRPAPHSRTPIEAYSLEVEPADHFINWQQDAFGNFLARLVFPTRTRELTIKVGLIADLKVINPFDFFIEDYAETFPFVYPKALKDDLEPYLRPVDEGDEGSGPGDLVGSWVRDFVVAPGTRTIDFLVALNRAVNGDVGYSVRMEAGVQTPDHTLRTGIGSCRDSAWLLVSILRGLGLAARFVSGYLVQLTSDVEALDGPSGPAADFTDLHAWTEVYVPGAGWIGLDPTSGLFAGEGHIPLAATPHPSSAAPITGTTGIAEATLDFANIVTRVHEDPRVTLPYTDAAWAAINQLGARIDERLADADVRLTVGGEPTFVSVDNQLDEEWITAADGPHKRERASVLAARLKAVWAPGGLVQRSQGKWYPGEPLPRWQIGIHWRRDGEPLWADAALLADPWGGDRGDVKPEAAQQILSVIADGLGLPATQVRAAFEDPLSRLAHAVRLPVGEPVEPGDDLETDTAAARAALLARLEEPVTEPAAYVLPLHRRDDDAGWASADWRLRRGRVVLLEGDSPAGLRLPLDSISWEPPRPSAPADPIASGARALPADPETTEAAVEDSPTAPTTAMVAEVRDGVLYIFIPPTEELEHFVDLITRVEAAAAKIACAVVVEGYGPPPDGRLQSMSITPDPGVIEVNVTPAASFAEQRDQLRTLYDEARLARLSTETFDVDGTHGGTGGGNHITLGGITPADSPLLRRPDLLVSLLTYWQRHPALSYLFAGRFIGTTSQAPRVDEGRSEALYELEIAFAEIARLTAEEGAAPDHGRSASVAPDHGRSASVAPWIADRALRHLLTDITGNTHRAEFCIDKLYSPDSPRGRLGLLELRGFEMPPHYQMAMVQSLLVRALVARFWDQPLRAPLIRHGLNLHGRYLLPHFIIHDIADVCADLRAHDVNFDTSWLDPFTEFRFPRVGTAVFDHVEIELRGAIEPWNTLGEESTGTGTARYVDSSVERIQVRTIGADRQRHILTCNGYPIPMLGTDNPDVLVGGVRYRAWQPPSALHPTITVDGPLRFELVDMATGTSRGGCTYHVSHPGGRSYDTPPVNAVEAESRRGRRFEATGFTPGKVDIGDIREKLARQSTDVGAPGILDLRRARTVLQN
>NZ_CP032155.1|WP_149380047.1|3607117_3608044_-|DUF389-domain-containing-protein
MLHLRVIAPVEVRDDVLAVLQRQVGVTHLVVHRGAALDPPGDEISADIARECANDVIDDLKALDLHHKGAITLDLVDTVVSTAAYRAEKEADGDPGDAIVWEELSARTREESTLNITFLLFLCLACMIAAVGVVTDSPVTVVGAMVVGPEFGPLAALAVALVRRRLDLARRASLALLVGFPVAMAVTAAFVLGGEALGWIKLGSTRQLTDVDFIFQVGPLSFVVALLAGAAGMLSLVSAKSAALVGVFISVTTVPAAGFAVVAASVGEWDVAVESAAQLAINLVGITLAGVLVLAMRRRHETRRHGAG
>NZ_CP032155.1|WP_149380048.1|3608085_3608388_+|hypothetical-protein
MDRPKPRWIPDRLWPWLGNRWVQAVLVIALFAILGVVFMMTSDRKDTAYWAGYTDGQRWVDAGGYQAHEESIAAYCAGQAAHHAASYQRGCVDGAHNAMH
>NZ_CP032155.1|WP_149380049.1|3608413_3611314_-|MMPL-family-RND-transporter
MILLNKDEKPQAEPGRRPHIAQWVRWLSVPIILGWLALTVITNIVVPQIEVVGQEQSVPMTAMDAPSSVAMSTIGSTFQEFKSNTSVMIVLESDQPLGDAAHQYYNEIVKKLEADKKHVEHIQDFWSDPLTAAGSQSSDGKSAYVQAYLSGNMGEGLANESVEAVKTIVESVPPPPGIKAYVAGSSALINDTHIAGDRSLKIITGLTFGVITVMLLVVYRSIVTVLIALVMVFLELAAARGVVAFLGYHHLIGLSTFAVNLLVMVAIAAGTDYVIFLFGRYQEARSKGVDKESAYYEMYHGTGHVIVGSGMTIAGALFCLHFTRSPMFQSMGVPLFVGMVVVVAAAMTLGPAVVTAASRFGLLEPKAASRERFWRRIGTAVVRWPGPILVATTFVCLIGLLALPGYRTDYNDRHYLPADIPASEGFAAAERHFPEARLSPELLMLQSDHDLRNSADFLVIDRVAKAIFHTPGIGRVQTITRPLGTPIEHSSIPFLLGMQGTTQTLNQSYMQDRMKDMLKMGDDMNVSIATMTQMYDLLGQLNAVTHSMVGKMDLTLADIQTLRNHIADFDDFFRPIRNYFYWEPHCFDIPVCWSIRSVFDTLDGIDTMTDDFQVLVPDLHKLDLLTAQMRTLMPPMIDTMRSMRTMQLTLQSTQSGQQDQIAAMQDNQSAMGKAFDEAKNDDSFYLPPEAFDNPDFKRGMKMFLSPDGKAVRFIISHEGDPMSPEGLSHIDPIKNAAFEAIKGTPLEGSKIFLAGTAASFKDMQDSADYDLMIAGLAALCLIFIIMLIITRAVVASAVIVGTVALSLGTSFGLSVLIWQDLIGRPLHWMVMVMAIVILLAVGSDYNLLLVARLKEEIPAGLKTGIIRAMGGSGSVVTSAGLVFAVTMAAMAFSELTVIAQVGTTIGMGLLVDTLVIRSFMTPSIAALLGRWFWWPQRVRPRPVPSPWPSPATRAADTEPISAQSQQ
>NZ_CP032155.1|WP_168215083.1|3611310_3611739_-|hypothetical-protein
MHLLRKVWLPIVIVLVIAIAAFGVFRLHGVFGKTETTRPGSGLANDTKPFNPKTVVYEIYGPPGAVATINYLDLDAQPQIVRDVTLPWSLTLTTTAPAASANIVAQGDSDTIGCRITVNGELKDEKTNTGVNAQTFCLVKSA
>NZ_CP032155.1|WP_149380051.1|3613373_3613865_-|MarR-family-transcriptional-regulator
MTLLQGPLADRDSWSAVGKCPIEKTMAVIGTKSAMLILREAYYGTTRFDDFARRVGITKAATSARLTELVDAGLLTRRPYREPGQRVRDEYVLTDAGTELMPVVWAMFEWGRRHLAEDTRLRLTHLNCGADATVEIRCAEGHLVPPDELGVELRRKGAAPTSR
>NZ_CP032155.1|WP_149380052.1|3613959_3615144_+|acetyl-CoA-C-acyltransferase
MAGFSGRDAVIVGAVRTPIGKGKPGGALHGVLPADLLAHSLSELVARTGVDPAEIDDVIAGAVTQVGDQAVNIARNALLGAGFPESVPGTTVDRQCGSSQQAISFAAQGVIAGAYDVVIAGGVESMSRVPMGSSVLPGSDPFGTRFAERYSDGLVPQGISAELIAARWGLSRTELDEFSAASHEKAAHATKDGLFDNELAPIAGLQTDEIIRPGTTVETLSGLKPAFYSEAYAARFPQINWEITPGNSSPLSDGSAAVLITTSEVAHRHGWKPLARIHTTTVVGSDPLYMLTGVIPATEKVLARAGLTLADIDLFEVNEAFAPVVLAWARDTGADLGKTNVNGGAIAIGHPLGASGARIMTTLVNALEQRGGRYGLQTMCEGGGMANATIIERL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP032155_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_7

3732296-3732397

Orphan

Consensus_repeat	Method
ACTCGGAGGTCTTCGTCATGTCACCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_7

>merge|NZ_CP032155|7|3732296-3732397|CRISPRCasFinder
ACTCGGAGGTCTTCGTCATGTCACCACCGTCCCCCCCCGCCCGACGCGCAACGCCGTCCCGCGCGCGCGCCGCGAACTCGGAGGTCTTCGTCATGTCACCAC

>NZ_CP032155|7|7|3732296-3732397|CRISPRCasFinder
ACTCGGAGGTCTTCGTCATGTCACCAC	CGTCCCCCCCCGCCCGACGCGCAACGCCGTCCCGCGCGCGCGCCGCGA
ACTCGGAGGTCTTCGTCATGTCACCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149380154.1\|3733829_3735668_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|223953
NZ_CP032155.1\|WP_149380153.1\|3733335_3733827_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380142.1\|3722960_3723521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380157.1\|3737087_3738446_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP032155.1\|WP_149380141.1\|3721488_3721887_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380144.1\|3725812_3726388_+\|CHAP-domain-containing-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380146.1\|3727457_3728480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380143.1\|3723729_3724044_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380148.1\|3729514_3730024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380152.1\|3733037_3733331_-\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NZ_CP032155.1\|WP_149380151.1\|3732556_3732799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380159.1\|3740501_3741146_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176854
NZ_CP032155.1\|WP_149380150.1\|3731258_3732248_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032155.1\|WP_149380149.1\|3730109_3731276_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP032155.1\|WP_149380147.1\|3728535_3729447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380155.1\|3735722_3736181_-\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176854
NZ_CP032155.1\|WP_149380158.1\|3738432_3740274_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP032155.1\|WP_149380145.1\|3726432_3727416_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP032155.1\|WP_149380156.1\|3736262_3736997_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|274529
NZ_CP032155.1\|WP_149380160.1\|3741174_3741456_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149380154.1\|3733829_3735668_-\|AMP-binding-protein	gnl\|CDD\|223953	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism].	0
NZ_CP032155.1\|WP_149380149.1\|3730109_3731276_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.64136e-76
NZ_CP032155.1\|WP_149380155.1\|3735722_3736181_-\|SRPBCC-family-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.28646e-10
NZ_CP032155.1\|WP_149380145.1\|3726432_3727416_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.00907e-14
NZ_CP032155.1\|WP_149380152.1\|3733037_3733331_-\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	1.36262e-22
NZ_CP032155.1\|WP_149380159.1\|3740501_3741146_+\|SRPBCC-family-protein	gnl\|CDD\|176854	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket; they bind diverse ligands. Included in this superfamily are the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, and the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), as well as the SRPBCC domains of phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of this superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	0.000266806
NZ_CP032155.1\|WP_149380150.1\|3731258_3732248_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.34974e-21
NZ_CP032155.1\|WP_149380157.1\|3737087_3738446_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	4.58022e-142
NZ_CP032155.1\|WP_149380156.1\|3736262_3736997_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	9.78796e-14
NZ_CP032155.1\|WP_149380158.1\|3738432_3740274_-\|GAF-domain-containing-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.47296e-40

>NZ_CP032155.1|WP_149380150.1|3731258_3732248_-|IS481-family-transposase
MSHRNAPLSETGRLRLARCVVEDGWSLRRAADRFQVAVTTASRWASRYREYGPAGMVDRSSRPHRCPNQTPTRTERRIIKVRVIRRWGPARIGYLLGLHPSTVHRVLTRYGMAKLRWLDRGTGCVIRRMQPAECGEMVHIDVKKLGKIPAGGGWRMLGRSVGNRNHQADKSSGQTNKRRQPVRGYHFLHTAIDGYSRLAYSEILSDERKDTAAAFWLRANTWFAQHGINVRKVLTDNGSCYRSHPFRDALGTIEHRRTRPYRPQTNGKVERFHRTLAEEWAYARLYRSDTERCDEFITWLHTYNYHRGHTALGGQPPAARVPNLSGQYN
>NZ_CP032155.1|WP_149380149.1|3730109_3731276_+|cytochrome-P450
MTATAQLPFRQSHPLRSPDDLLALQGTGPIHKVLTSVGDEAWLVTGYSLVRSLMDNELLGRTHRDPANAPRSRTSALFGGPIGDFDSEPTDHARMRQLLQPHFGPRHMRTLQPKVQGLCTALLDDMERQGPPADLLTSLAQPLPILVICDLLGVPYADRDRFRLWVDDAAFSPDDDVSLKGLESLLGYGMELVGVKRANPDDDVISRLCDEPDLADFEIATLAMQLLFAGHETTVTQIWVGCLLLLSNPDQWQALLHNPDLIPKAVEEVLRAGMTGGVGVPRYARGDIDAGGVTIREGDLVLLDPGAANHDPEVFTDPYRLDLNRTGAAHVGFGYGLHYCLGAALARLELKTVYSQLIPRFPTLQLRTDPATMTAGFHSLSHGLVVLT
>NZ_CP032155.1|WP_149380148.1|3729514_3730024_-|hypothetical-protein
MAHTNLRSLSAFAGLCAAPAAMAFWLAPIAAADSASWNGEYAITFIVGPKAGTSVAAGQPEQQHTETYGFQSNCTNGKCIATITSGPPPSNPTVPQPVQFTWDGSSWAQASDFQWQCLMPDETIQWNPAHAEVRYTPQADGSLSGTMHTEIFSGACQGTVEMNMTAERA
>NZ_CP032155.1|WP_149380147.1|3728535_3729447_+|hypothetical-protein
MIQGISGVATRDPHEFLAEQAQAVAARWSKQCDDLRASATAWGKGVLTVGTVIIGGFGLSSVTGIFPIDGHLAWLYASLALASILMMAVAAIWLSRRLSRASRTIVMSADLEVMRARRDKNDESALPHVKHLDDNSFTEAELETIAAVYDVFAELNRPNSLPLEQKYTLKDYLQIALDIERKAESADPDIQAVGQRRLPRAAQIRAEVYATQAKAMAHVIRMRVNEATSGGGTIAAMLLFVASLVTVVMFASFASDTRSTHNNSIEHVRQCAEAAKAYREAQDPRLVNLPESCLKPTRLLALP
>NZ_CP032155.1|WP_149380146.1|3727457_3728480_+|hypothetical-protein
MSTKLVMIHGRNQASDQQTADDPAKLAAYVDNKKRQFLAGLAKGLVLANRPPIVEGEVIFPFYGNVFRDSIADYERSGGIPPHLEAADPATELEVNTCGDQDQIRALSTLQANLLQDMAGHLDYDAVRELRYQGGSADELAVSDVLGVPFVTGALQFLSRKTGVPAAIIRNHLADVAYYIGMESMRHKVLDVVRREILSHTSADDDLVVIAHSLGSVVAYDLLADQDNALGDRRVKLFVTVGSPLGLKLVKARLHGRQPAVPAGAPLKVIESNARWLNGYDVLDIVALIHPLAPEFKGTDRLSDERTYNPTGPHAIIDYLADPDIAAPISDHMAILEPVG
>NZ_CP032155.1|WP_149380145.1|3726432_3727416_+|trypsin-like-peptidase-domain-containing-protein
MVSAPQLDQHRARIIVPTSVDFVKQVTRDRQGNYRRATTCKKREHLKAKGVPVPAQATDRQVNTAIERIIDGDDLKPISWLTKARTAAAAVGLISMKVDGKEASATGFMISPCLMMTNHHVLHTAEEASDPSVNFTFGHEKSSDNRPLVGEETISLDAAAFFVSSEELDYTIVGVGRTTDRQLPGDKYGRLPLIKASSKALPGSALNIIQHPGGNYKQIAFRNNLMTDAETPNLLVYLGDTTPGSSGSPVLDDDFDLVALHHGSRDFIDDHGNRIDLNGDPVTAETPEALRYWVANEGWIRISAIVADLARRQMSPQQRALISAAIL
>NZ_CP032155.1|WP_149380144.1|3725812_3726388_+|CHAP-domain-containing-protein
MASLLVSEDYSGRVAMPPPGFDVDSVASRVGLDPAETHDDNVLEIAASAPSGHSPIGLRMVEIATGQIGVCETANNGGIPLTRYVHPFAPGSPGVPWCAFFVSWCYLQTTGSRPPWNNPGWVQSIYAWAANNRRLVGTPLRGDMFGLGGNHIGLVARSLRDRVITVESNTSTGCVRSNERPLTGLWFGRPK
>NZ_CP032155.1|WP_149380143.1|3723729_3724044_-|hypothetical-protein
MADDEYQSIDLKVEWPTDIYRDAAMTNIFVLSDDGQGIYLGMGHIPPFTTSPPAGGATVVPDVRAAVHLTYRNANELAQLLNEIVDRKKREIKERREAGASNAD
>NZ_CP032155.1|WP_149380142.1|3722960_3723521_-|hypothetical-protein
MNPADEFLPDDRLIAVAMPEVRTNVGQFWESVFLAARHLPEGEVNPVEVEELRSDDRLIAVVTRSIQGGANEARTRELVGRKMGQVWALKDGWRGPGSLAPSKVARDFYLSVVQVLPGRLLGPAQPTPTADGGIHMEWRRGDYDYEAEITCDGELILTVLGPDDDDETVIQSPTTADLVEFVCHGA
>NZ_CP032155.1|WP_149380141.1|3721488_3721887_+|hypothetical-protein
MTRQWLQCNAFPRWQYTPPIAWEDAITNWLTWLAVGGTPPTTRRLRRGHLRFIARHSHTSHPAEPNLAMMDRICHTQPWSNEHRRSVRRSLIDFYDWAVHHRLAVANPAAGFPKVPAASHTPGRCPNTSGAS
>NZ_CP032155.1|WP_149380151.1|3732556_3732799_+|hypothetical-protein
MPGAKRVVKKLKRRATVVEVIVAGAAVVVAAIAIAAVYFYKPTPPPDFHSVSSTSQTSAAPPTAPGPAPMPVTATKAPKP
>NZ_CP032155.1|WP_149380152.1|3733037_3733331_-|elongation-factor-Tu
MFRLTVQDVFAIKGRGLVATGRVELGQVSAGDEVRINDARTVRVDAIESFRKTVDEAVTGDNVGLLFSGLGRSDLSPGDVLTIGAVGSVSDGIDVRL
>NZ_CP032155.1|WP_149380153.1|3733335_3733827_-|hypothetical-protein
MRRCGVLLAATAALSFGVATARADAPVPQAGASCPADFADVMTRLPDVGDFLVCQASGTWVPVLGPFDPASRWLSYGAGITLHGQGFRNPNLRSGQWTATPLDPSAVCSADQVTVIGPGELAPVVHSPGEVGQPLHLDVLPKLFTITMNGDCLWSEDLPPGLG
>NZ_CP032155.1|WP_149380154.1|3733829_3735668_-|AMP-binding-protein
MAGPRKSDERPDVSKIDNRAPSVPRMFLDRVAATPNAEAFRYPDQDGWTSVTWAQVGERVELIAAGLIALGINPEDRVALAAGTRYEWVVVDFGILSAGAATTTVYPSTNAEDTAFIVANSGSRVVVAENQSQVDKLTANRADLPAVEKVVMIDGTSDDDWVITLDDLEQLGKQLLADNPTAVTERIDAIPPEQLATLIYTSGTTGKPKGVRLHHEAWTYTAAALDSLQVLSDKDLNYLWLPLAHSFGKVMLAMPLLMGFPTVIDGRVDKIVENLAIIKPTFMGAVPRIFEKVHGRITETMVEEGGVKKRLFDWATDVGLQVSRARQAGHRVGPLLALQHKLADKLVFNTIRQRFGGRLRFFISGSAALDRDIAQWFDAVGAIVLEGYGLTETSAASSLNRLHAYRFGTVGWTLPYTDVKIAADGEVLLKGPGVMSGYHDLPEATAEAIEPDGWFHTGDIGELDAEGYLRITDRKKDMFKTSQGKYVAPSAISAAFKGICPFASEIIIYGEGKPYCVALVSLDAEAIREWADRNGMEGKSFEEVARDQKTREMVEGYVETLNKHLNRWEQVKRFDIIDRELTVEAGDLTPSLKLKRKAVVENFHDNIDELYG
>NZ_CP032155.1|WP_149380155.1|3735722_3736181_-|SRPBCC-family-protein
MPTSVTRDIDAPRERVWEVLADGWTYSQWVVGNSRMRAVDADWPAPGTRILHSIGVWPAVIDDETVVLRCTPQEELVLLARLGPAGAARITLRLSDIEGGCRLEMAEVAVEGPMRFVPDRLQLAGFWPRNRESTWRLANLAADREPAEFDQN
>NZ_CP032155.1|WP_149380156.1|3736262_3736997_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MEDQARIAYPIRLDDLIDGIKKVHTDALDQLSDAVLTAEALGDLADHLIGHFVDQARRSGASWTDIGKSMGVTKQAAQKRFVPKMTNLDAADLDPAQGFARFTPRARSAVVAAQNAAHGAGNAEITQSHLLLGVLTDPAALATPLLRAQQISPDATRAAIVLPPRVAEVPALIPFDAGARKALELTFREALRLGHNYIGTEHMLLALAEAEEDGGTLHRLGFDKARAEADIVEMLAAVTSTKEP
>NZ_CP032155.1|WP_149380157.1|3737087_3738446_+|diaminopimelate-decarboxylase
MTLSELLPSLGHAGLDRRIWPSSTHLDDLGQLCIGGVPLTEVADKFRTPTYVLDESDFRSRISRYRAALPGVSIAYAGKSLLTTTVARWVEEHGADLDVCSGGELAVALAAGVNPARIIMHGNAKTPDELRDAAAAGVGRVVLDSPLEIAFLSGQVRRRQTVLLRVIPGVDIGGHPAVVTGVEDQKFGFTIAGDRALDAVGRILNQPCLSLAGLHCHIGSQVADPALYGHAITRMIAVMADIRGRYGVALPELNIGGGHAVPYVSSDPEFDLARFGDIIEDSLTSACAATDFPRPQLTVEPGRAISARAGVTLYRVVAIKSQPGGRTFVAVDGGMSDNPRVALYGAKYTVALANRHTATPCTAVTVVGRHCEAGDVVVRDAQLPADIHPGDLLAVACTGAYHHSMASNYNVVGRPPLVAVADGRCRPLVRRETIADLLSRDCGVELPHVIPR
>NZ_CP032155.1|WP_149380158.1|3738432_3740274_-|GAF-domain-containing-protein
MPPADIDVGRGILRKAVVGHPFTSKIGLSQCGRCSREAQGTGLISEGRPGAQFGRERSGDVRRIHDQLDELAADRDQMGLLLQLAIEISSDLELEPTLHRIISAALTLTGARYGAIGVWGPDGLLTSFVHDGMDERTVDQIGHLPVGKGLLGALRDRTDLLRLDDLTQHSASAGFPDGHPPMRAFLGIPIRIRDDKAFGSLYVADDRTGRTFSESDEVTGRALASVAAVAIDNAQLFDATRIAALWTSASREITAAVLSDGQPILRPLQLIAARACELTEAEQAIVLFPDDADQPDDEVDTLVVSAAVGRYADDVLGQRVAVDGSTSGSVFRSGEPVITETFRKPIQSFTDIGERPAIVVPLWADGHSLGVLVVARNVNAARFGAKDLDLVRDFAGHAAIALTIARARRYTAELALLTDRERIAHDLHDQVIQRVFAVGLDLQGAIARIRDPEMAQRLSRSVDELQAVITEIRSTIFNLQHSVDSTGGLAARIHNVFEQLTNNRDIAARLNLSGPLSIVSAELAANAEAVVTEALSNAVRHSGASEVTVSVAVGDDLTIMVTDNGCGIPADNRRSSGLHNLARRAESAGGVFTVSDAETGGTKLVWTAPLTSE
>NZ_CP032155.1|WP_149380159.1|3740501_3741146_+|SRPBCC-family-protein
MTAMTRLGATAAILLAARQFFRNWGTTKAECAMPLPGDSLVGQPAVVTTEGITIDRPPEAVWPWLVQIGLDRAGLYAYETLHALAGLDYHDADRIHPEWQHLAVGDTVRLAPRGWLGLDDGIVVTVAQIEEGRSIVLRTRGGDSFWDAVWSLNVAQHGDDGTRLLIRTRVPLRRPGAVVGAELIAPPKAFVTRAILRGVKHRAESEPAPRRDPP
>NZ_CP032155.1|WP_149380160.1|3741174_3741456_-|hypothetical-protein
MTETGNQTTVESPDLTDELRESAKAGQHAAGQALRKFRDAVDDAIPESVQPLRDKIVQAALDLADDLVSAQYKFHRSLLNTADRALTKSDTDR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP032155_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_8

4328525-4328640

Orphan

Consensus_repeat	Method
AGCGCCGCACAGTACTCCCTCCAGCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_8

>merge|NZ_CP032155|8|4328525-4328640|CRISPRCasFinder
AGCGCCGCACAGTACTCCCTCCAGCAAGCCAAAACTGCCGCCCTCGACCCCCCTGCCACGCGTGACGTCTCTCACCAGTCGCTAGCGAGCGCCGCACAGTACTCCTCCAGCAAGCA

>NZ_CP032155|8|8|4328525-4328640|CRISPRCasFinder
AGCGCCGCACAGTACTCCCTCCAGCAAGC	CAAAACTGCCGCCCTCGACCCCCCTGCCACGCGTGACGTCTCTCACCAGTCGCTAGCG
AGCGCCGCACAGTACTCCTCCAGCAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_051659896.1\|4323421_4324849_+\|cell-division-protein-FtsK	unknown	unknown	gnl\|CDD\|224588
NZ_CP032155.1\|WP_149380681.1\|4329494_4330427_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP032155.1\|WP_149380697.1\|4338451_4338886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_036339723.1\|4320913_4321456_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP032155.1\|WP_036339733.1\|4326478_4326670_+\|excisionase-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP032155.1\|WP_036339726.1\|4321472_4321943_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240032
NZ_CP032155.1\|WP_047329669.1\|4321963_4322683_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|376540
NZ_CP032155.1\|WP_149380695.1\|4338106_4338439_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380358
NZ_CP032155.1\|WP_047333248.1\|4319582_4320104_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP032155.1\|WP_051659897.1\|4328883_4329435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149380691.1\|4336678_4337044_+\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|237643
NZ_CP032155.1\|WP_149380689.1\|4336283_4336682_+\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|184572
NZ_CP032155.1\|WP_036339721.1\|4318680_4319328_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP032155.1\|WP_168214926.1\|4324929_4326327_+\|plasmid-replication-initiator-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_036339731.1\|4322926_4323310_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_036345900.1\|4326669_4327935_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP032155.1\|WP_168214928.1\|4332569_4333844_-\|YncE-family-protein	unknown	unknown	gnl\|CDD\|225926
NZ_CP032155.1\|WP_149380693.1\|4337040_4338102_+\|DUF190-domain-containing-protein	unknown	unknown	gnl\|CDD\|376875
NZ_CP032155.1\|WP_168214927.1\|4331239_4332502_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP032155.1\|WP_149380687.1\|4334580_4336215_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|236050

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_051659896.1\|4323421_4324849_+\|cell-division-protein-FtsK	gnl\|CDD\|224588	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning].	7.53821e-21
NZ_CP032155.1\|WP_168214927.1\|4331239_4332502_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.55796e-61
NZ_CP032155.1\|WP_036339723.1\|4320913_4321456_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	4.81755e-08
NZ_CP032155.1\|WP_036339733.1\|4326478_4326670_+\|excisionase-family-DNA-binding-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	5.99561e-09
NZ_CP032155.1\|WP_036339726.1\|4321472_4321943_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.27805e-56
NZ_CP032155.1\|WP_047329669.1\|4321963_4322683_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	6.90046e-06
NZ_CP032155.1\|WP_149380695.1\|4338106_4338439_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	4.78619e-20
NZ_CP032155.1\|WP_047333248.1\|4319582_4320104_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	3.70231e-12
NZ_CP032155.1\|WP_149380681.1\|4329494_4330427_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	0.000104177
NZ_CP032155.1\|WP_149380691.1\|4336678_4337044_+\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|237643	PRK14228, PRK14228, fluoride efflux transporter CrcB.	1.0612e-54
NZ_CP032155.1\|WP_149380689.1\|4336283_4336682_+\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|184572	PRK14216, PRK14216, fluoride efflux transporter CrcB.	5.95109e-70
NZ_CP032155.1\|WP_036339721.1\|4318680_4319328_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.74131e-09
NZ_CP032155.1\|WP_036345900.1\|4326669_4327935_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	8.09481e-38
NZ_CP032155.1\|WP_168214928.1\|4332569_4333844_-\|YncE-family-protein	gnl\|CDD\|225926	COG3391, COG3391, Uncharacterized conserved protein [Function unknown].	5.03e-29
NZ_CP032155.1\|WP_149380693.1\|4337040_4338102_+\|DUF190-domain-containing-protein	gnl\|CDD\|376875	pfam02641, DUF190, Uncharacterized ACR, COG1993.	1.46706e-28
NZ_CP032155.1\|WP_149380687.1\|4334580_4336215_-\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|236050	PRK07564, PRK07564, phosphoglucomutase; Validated.	0

>NZ_CP032155.1|WP_036345900.1|4326669_4327935_+|site-specific-integrase
MAAGGKARRNANGQGGVYRRGDGRWEAKVFVDTPDGRRKRISVYGDSERAALDELGKVLDQQRRGIPTATTTLTVAEYMTYWLEHIAEPSVRRTTYATYEGDVRLHIIPGIGNRKLKSLQASHIRAWLTGLQTRCQCCAQGKDAARGRKSQARCCALVPAKCCNDALSASSIRHILRVLRAALQDAVDEEMLSRNVARLVQLRVTDDRKVRSFTRAEAMRFLKTAETTRLYALWAVALSMGLRRGEALGLQWSDVDLDAERITIRRALHRVDGQLKLENVKTEGSVAVLPVPRTLVPILTNHRRRQLEERLAAGSTWRDTGLVFTTPKGGALEPRNVNRMFHSLCAKAEVPQLRVHDLRHSCATLLFTMGVQPATVQKILRHSSITVTTGTYVEVIEAVQRDALDSMGSLFASNSLGDETG
>NZ_CP032155.1|WP_036339733.1|4326478_4326670_+|excisionase-family-DNA-binding-protein
MHTEFSAELITVQAAADRLAVSRWMVYRLIWDGRVRSVQIGRCRRIVRQSFDDYLSGLIEGAA
>NZ_CP032155.1|WP_168214926.1|4324929_4326327_+|plasmid-replication-initiator-protein
MVRRAASRDFETWWNKAENAGFCANPIRLTGTDSFGRELRVWTRCNNRRAVACPSCSDLYARDTWQLVHAGVHGGHHDLPPTVAEHPQVFVTLTAPSFGAVHTTRDDGQRGQARRCHDRGRNAHQRCQHGRPLWCSSIHHEGDAHVGQPLCEDCYDYMGHVLFAWHAPELWRRFTIALRRLLRRRLRALGESPTAARINFVKVTEMQRRAIPHFHAVIRLDEPPQPGQAPTPPKSSITATDLALLIHQAASGVALTVAAPAHGAEISSRVIQFGTQTDARPLRSDSSDCGGATPRQSRRSVPAYLAKYVTKSVADFGVGVRRMSPLAVPDLDVPTHIRAILTTILDLADHGAYSEIDRWLHTLGFRGHITTKSRLFSTTMSALREHRAEWTREQRHRSDLATDEHDRALHGAEEEVEWTFDRAGLGNLGERTLVVSAAHRMIEHRHIVRANRWTHDQSSPPDWST
>NZ_CP032155.1|WP_051659896.1|4323421_4324849_+|cell-division-protein-FtsK
MPGHPRAHRSNRSLPNHSDSDDIALRAATALGKATAALVWASVLFPMISIPAITSVWMAVTCGPLVGLLAAIWSALALFSWFLLSPQTFRQWVTVRLRVQWRTWGIYRGRWATVCTLCGLTAGLDGHVMVPILRSVTIGVTSDVLEVRILTGQSLADWQSRGDALAEALSAQRVTIRSTRPGSIRITAHHGDPLTTPIQLPRPARGTTPDLSRLWVGLTEAGERWRLPLLGQHILVAGATGSGKGSVLWSIIAAVGPAVRAGCARLVVVDPKGGMEFGRGQVLFTSLAHDNGEQTLAALRAVVAVMQKRAQRLRGKTRLHTPSVSAPLIVLIIDEIASLTAYLGDRRTRAEVEQLLGLLLSQGRAVGISVVAAVQDPSKDVLPIRQLFSIRVGLRMSEATQTAMVLGAAAREAGALCDGISTGTPGVGYVCTDGNAEPLRVRAFHVTDSAIDDLVARFAPTRAHPRTAETEGRQS
>NZ_CP032155.1|WP_036339731.1|4322926_4323310_+|hypothetical-protein
MKLRINTGGVSFVCTRAPEQRIAFDTGQPKLDRETGLPLWQVQVMALDSTGGDVITVTVAGDPNVTVGQPIHIEGLVALPWSQDSRSGVAFRAEAIRASGAPLAGVVAAPRNASPSGVPGGTSKPAA
>NZ_CP032155.1|WP_047329669.1|4321963_4322683_-|helix-turn-helix-domain-containing-protein
MSEKGFSEARLATAAGVDVKTVGRWVRGESLPQAVNARATADALGCDPQTLWPDIFPTLRPPGTGTVAVSVYRSRADVPVAVWTQLFGGAAEQIDILVYGGTFLFDGIPRFCSTLAVAAERGVAIRFIVGDPDCAAVSQRGEEETIGSVLAARCQITLARLASLADAPGLEVRTHATPLYTSMFRADNTLIANPHLYGAPASDNPVLFIRRDDAPELWRDHQLSFERVWNTAQPLPTHA
>NZ_CP032155.1|WP_036339726.1|4321472_4321943_-|NUDIX-domain-containing-protein
MARTDYYNDPHAPAANSVVPSTTAVVTDSHDRIVLIRRRDNNLWALPGGAMELGESIVDAAVREVKEETGLDVEISGLIGVYTNPRHVMAYADGEVRQQFSLCFTTRLLGGQLRVDSESTDIAWTSPGELASLDVHPSMRLRIQHYLQRRDSPYLG
>NZ_CP032155.1|WP_036339723.1|4320913_4321456_+|HD-domain-containing-protein
MVVTDAARARAIAEERLADLPHRWAHVCGVAATAERLVVGLGAMDADAVVAAAWLHDVGYAPSVRSTGFHPVDGAVFVRDEGFPAVVVSLVAYHTGAVFEARERGLLDALAEFTAPPSLLLDVLTCADLTTGPQGSPVRAEDRVTEILSRYPDGDPVHRAIERAAPSLLAAAARVSASAG
>NZ_CP032155.1|WP_047333248.1|4319582_4320104_+|PaaI-family-thioesterase
MGDTAHPGPYLLPPHTSTCTGCGPANSHGLQLVVYRDGDEVYSDVTFDERHIGAPGLAHGGAVATACDDVLGFTLWVAGTPAVTRSLTVEYLRPVPLHEPHRITAQITGRQGRALHVSGTGVSHDGITRFTASAVFVTVGVDHFAAHGDVSGFEDLFDRLAGALHQPIGDHSV
>NZ_CP032155.1|WP_036339721.1|4318680_4319328_-|TetR/AcrR-family-transcriptional-regulator
MSTQPAAYADDDDDIDPRRIRSRNRLLDAAAALLTTGGIEAVTIDAVTKASKVARTTLYRHFASSSQLLAATFERLLPHVTTPTPDEGSLRQRLIEILSRQAALFADAPIQVTTLAWVALGPTDPAADGTADEDSPAGSLRSRVVEQYRKPFDEILSSDQAREELDEFDLELAECQLVGPLVFARMTGLCTISRDQCVRIVDDFLAAHSRTRTEA
>NZ_CP032155.1|WP_051659897.1|4328883_4329435_-|hypothetical-protein
MNDYDNRAPNGPAGDRRRPQSINESPLNGPLEVGIRVLMILTQAFPAELDLNQLVLLDHFVLHSRDVGGPESLHPALPIRAGEIAAKRESIEAGIGLLLRLHLAEIAVGMNGVRFLAGDGALHFVGVLGSSYSHRLRDRVGWVLGSFPDLDEANLRRQTKAIFDSWSEEFHWPDTDGNNGKPH
>NZ_CP032155.1|WP_149380681.1|4329494_4330427_-|restriction-endonuclease
MARISLYDDVQWELFILEWVHALRSGYVQVKRFGGAGDRGADIAAFKTANGLEGAWDCFQCKHYAEPLALGDILPEILKIFVATVVGECVLPDSYQILAPRGCSTNCGRMLSSPQKLRKKFLDHLADDDSTLARGLESDLVSSVQELASVTDFSMFRSVELTDVLELHKTTCWYSDRFATALQPRPAHVPAPGDLATHERRYVQQLVDVYAEAHPEESLQPESVASNPRVGERFRRHRENFYKAEALRVYARDSVPPGTFERLQDDIHSGVIDVVEDHHATGLRRLTSVLSLVGQLGSESASSDFGGRDR
>NZ_CP032155.1|WP_168214927.1|4331239_4332502_-|MFS-transporter
MSSVAEGDCPSEAEAKLPREVWVLIAANAVIALGYGVVAPVLPQFARNFGVSISAATFVITAFALMRLVFAPASGMLVQRLGERRIYVSGLLIVALSTGACAFAHTYWQLLVFRALGGIGSTMFFVSALGLMIRISPHNARGRVAGMFSSAFLVGSVAGPLLGSLTAGLGLAAPFLIYGAALLIAAAVVFINLRHSHLAAPAPADELTVTLGVALRHPAYRAALLSNFATGWSAFGLRVALVPLFITEALHRGPGVAGAALATFAAGNVAAVIPSGRLSDRTGRRPLLIVGLGLSGLTTAVVGAATVLPVFLVGAFVAGAATGVFTAPQQAAVADIIGKARGGTAVATFQMMSDLGSIAGSLGVGEIAQHLSFEWAFAISGAILVLASIGWLLAPETRDRPPLEHTPPRPLGPEAAGELP
>NZ_CP032155.1|WP_168214928.1|4332569_4333844_-|YncE-family-protein
MIDTATNTVVATIGGLTGPRGVAFTPDGGRVYVGNGGGASVSVIDTATNTVTATIDVGDPTEYFATAPHAVTVSPSGTRVYVADMNNNNLFVIDSDPLSAGYNTVIGTVKMPAGPAVVKVSPDGNRVYVVSTDWVGTSGNRTLSVIDSATNTVTASLVVGLANTNLLTADDMAVGRDGAKVYIANSGSGTVAVVDAATNTVTTVYAVGGSPQGVAVSPDGARLYVTNGSNRTVSVIDIASNAVATVVVGNGTVGGIATPLAVVVSPDGTRAYVNVADTFWRNVGSVVVINTGLLAGSGGGTGGGTGGGTGGGTGGGTGGGGTHNPNSAFETQWETFTVYTGWIPVWGTFVSTVSLVVDLNDFGDALRRGSAADIADEAGDLFGDVLGVGLGLIPGGGLAAAALKGVASAGIGAGVTWLLDRVGR
>NZ_CP032155.1|WP_149380687.1|4334580_4336215_-|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MAANPRAGKPALPEDLVDLPHLVTAYYTLNPDPDNIDQQVAFGTSGHRGSSLDGAFNEAHILATTQAIVEYRAAQGTTGPLFIGRDTHGLSEPAWVSALEVLAANDVVAMIDSADRYTPTPAVSHAILTYNRGLSAGLADGIVVTPSHNPPRDGGFKYNPPNGGPADTDATGVIAKRANEILRDGLRGVKRVPLARALQSAQRHDYLDAYVTDLPNVVDIHAIRSEKIRIGADPLGGASVDYWGAIAERHNLDLTVVNPLVDATWRFMTLDTDGKIRMDCSSPNAMASLIANRDSYQIATGNDADSDRHGIVTPDAGLMNPNHYLAVAIDYLFSHRPDWPASVAVGKTAVSSSIIDRVVAGLGRKLIEVPVGFKWFVDGLIGGTIGFGGEESAGASFLRRDGSVWTTDKDGIILALLASEIQAVTGSSPSQRYDELAAKYGAPVYARVDAPANREQKARLAKLSPEQVSATELAGEPITAKLTTAPGNGAPLGGLKVTTADGWFAARPSGTEDVYKIYAESFKGPEHLAEVQEAAREVVNSVIS
>NZ_CP032155.1|WP_149380689.1|4336283_4336682_+|fluoride-efflux-transporter-CrcB
MFGHDNRELAAVFVGGAVGTLARAILATVFADDPAHWPWATFGVNIVGAFLLGYFTTRLLERLPLSSYRRPLLGTGLCGGLTTFSTMQVETLKMIEHHHYGLAAAYSAVSIVAGLLAVYIATALVRRVRIRA
>NZ_CP032155.1|WP_149380691.1|4336678_4337044_+|fluoride-efflux-transporter-CrcB
MTVVIWAGVMLIGGLGSVARFMVDRAVARRAARSFPFGTLAVNISGAVLLGFISGLTLSHHVALLAGTAFVGAYTTFSTWMLETQRLTEERQIWPAIANLVVSVILGVAAALLGQWIAGLL
>NZ_CP032155.1|WP_149380693.1|4337040_4338102_+|DUF190-domain-containing-protein
MNDTYLKLTAFFGERQRTGSRFLAEAMLDLYAQRQVAESVMLRGIASFGPRHVIRSDESLTLSEDPPIAVAAVDTAETIGGLIDDVIAITKRGLITLERTRLYSGELPDGDDGVKLTIYVGRRRRINGAAAFYAVCDLLHRHHFAGATVFLGVDGTADGRRRRARFFSGNTDVPIMIVAVGTAEQARRALPELEGMMDQPLVTVERVQVLKRDGQLLARPPALPAVDAHGRELRQKLTIHTDASTHHDGVPVHRALVRRLWESNTAGGATVLRGIWGFHGDHKPHGDKLIQYGRQVPVTTIVVDTPEVIAQCFDLIDDVTGRHGLVTSEMVPALLMLDGDIRQGATDLADYRY
>NZ_CP032155.1|WP_149380695.1|4338106_4338439_-|LuxR-family-transcriptional-regulator
MDSISLTQLADDQLATARSSNSGRAAHTVHGGHGHPLRQTLIALAKGHELSEHHTPGETTLQVLRGHVRLATADDAWEGQTGDLLVVPRDRHGLQAIDDSVVLLTVLADS
>NZ_CP032155.1|WP_149380697.1|4338451_4338886_-|hypothetical-protein
MNHWTAVAGAAVFVWLGMVLAISFLEAPLKFRAPGVTIPLGLGIGRLVFRALNICEAVLAVVIVIALVAGSPGPGVVVAVVVAAAALVIQVVGVRPALTRRSDAVLADASQAEAGRSRAHYVYVVLEVVKVVALLSSGVLLLSF

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Crispr_ID: NZ_CP032155_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_9

4783339-4783436

Orphan

Consensus_repeat	Method
GGTGACATGACGAAGACCTCCGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_9

>merge|NZ_CP032155|9|4783339-4783436|CRISPRCasFinder
GGTGACATGACGAAGACCTCCGAGTTCGCGGCGCGCGCGCGGGACGGCGTTGCGCGTCGGGCGGGGGGGGACGGGGGACATGACGAAGACCTCCGAGT

>NZ_CP032155|9|9|4783339-4783436|CRISPRCasFinder
GGTGACATGACGAAGACCTCCGAGT	TCGCGGCGCGCGCGCGGGACGGCGTTGCGCGTCGGGCGGGGGGGGACG
GGGGACATGACGAAGACCTCCGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149381400.1\|4786419_4786890_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|224679
NZ_CP032155.1\|WP_149381398.1\|4786025_4786277_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149381381.1\|4778128_4778878_-\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187554
NZ_CP032155.1\|WP_149381403.1\|4787323_4788829_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP032155.1\|WP_149381390.1\|4782229_4783264_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176247
NZ_CP032155.1\|WP_149381379.1\|4777785_4778076_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP032155.1\|WP_149381375.1\|4774649_4775939_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379877
NZ_CP032155.1\|WP_149381405.1\|4788889_4790518_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|237230
NZ_CP032155.1\|WP_149381385.1\|4780578_4781505_-\|DUF4349-domain-containing-protein	unknown	unknown	gnl\|CDD\|379526
NZ_CP032155.1\|WP_168215103.1\|4775931_4776555_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236607
NZ_CP032155.1\|WP_149381392.1\|4783483_4784473_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032155.1\|WP_149381377.1\|4776597_4777407_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149381394.1\|4784469_4785048_-\|cyanamide-hydratase	unknown	unknown	gnl\|CDD\|188314
NZ_CP032155.1\|WP_149383690.1\|4785110_4785266_-\|excalibur-calcium-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377566
NZ_CP032155.1\|WP_036346100.1\|4790604_4790907_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP032155.1\|WP_149381396.1\|4785473_4785992_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149381383.1\|4778939_4780577_-\|CocE/NonD-family-hydrolase	unknown	unknown	gnl\|CDD\|225487
NZ_CP032155.1\|WP_036340680.1\|4774205_4774610_+\|DUF5319-domain-containing-protein	unknown	unknown	gnl\|CDD\|379954
NZ_CP032155.1\|WP_168214947.1\|4786882_4787245_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149381387.1\|4781508_4782180_-\|glycoside-hydrolase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149381400.1\|4786419_4786890_+\|OsmC-family-protein	gnl\|CDD\|224679	COG1765, COG1765, Predicted redox protein, regulator of disulfide bond formation [Posttranslational modification, protein turnover, chaperones].	2.60266e-33
NZ_CP032155.1\|WP_149381381.1\|4778128_4778878_-\|NAD(P)H-binding-protein	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.01613e-18
NZ_CP032155.1\|WP_149381403.1\|4787323_4788829_-\|HAMP-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	6.4701e-53
NZ_CP032155.1\|WP_149381379.1\|4777785_4778076_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	4.38026e-26
NZ_CP032155.1\|WP_149381390.1\|4782229_4783264_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	6.74446e-169
NZ_CP032155.1\|WP_149381375.1\|4774649_4775939_-\|hypothetical-protein	gnl\|CDD\|379877	pfam16751, RsdA_SigD_bd, Anti-sigma-D factor RsdA to sigma factor binding region. RsdA_SigD_bd is a domain at the N-terminus of anti-sigma-D factor RsdA proteins. It binds to the -35 promoter binding domain of sigma-D. The complex formed regulates the transcriptional expression of the bacterium.	1.68704e-12
NZ_CP032155.1\|WP_149381405.1\|4788889_4790518_-\|chaperonin-GroEL	gnl\|CDD\|237230	PRK12849, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP032155.1\|WP_149381385.1\|4780578_4781505_-\|DUF4349-domain-containing-protein	gnl\|CDD\|379526	pfam14257, DUF4349, Domain of unknown function (DUF4349). This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 282 and 353 amino acids in length. There is a single completely conserved residue D that may be functionally important.	1.40042e-70
NZ_CP032155.1\|WP_149383690.1\|4785110_4785266_-\|excalibur-calcium-binding-domain-containing-protein	gnl\|CDD\|377566	pfam05901, Excalibur, Excalibur calcium-binding domain. Extracellular Ca2+-dependent nuclease YokF from Bacillus subtilis and several other surface-exposed proteins from diverse bacteria are encoded in the genomes in two paralogous forms that differ by a ~45 amino acid fragment, which comprises a novel conserved domain. Sequence analysis of this domain revealed a conserved DxDxDGxxCE motif, which is strikingly similar to the Ca2+-binding loop of the calmodulin-like EF-hand domains, suggesting an evolutionary relationship between them. Functions of many of the other proteins in which the novel domain, named Excalibur (extracellular calcium-binding region), is found, as well as a structural model of its conserved motif are consistent with the notion that the Excalibur domain binds calcium. This domain is but one more example of the diversity of structural contexts surrounding the EF-hand-like calcium-binding loop in bacteria. This loop is thus more widespread than hitherto recognized and the evolution of EF-hand-like domains is probably more complex than previously appreciated.	2.62768e-09
NZ_CP032155.1\|WP_149381392.1\|4783483_4784473_+\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	8.16727e-21
NZ_CP032155.1\|WP_149381394.1\|4784469_4785048_-\|cyanamide-hydratase	gnl\|CDD\|188314	TIGR03401, Uncharacterized_protein_YFL061W/YNL335W, HD domain protein, cyanamide hydratase family. Members of this protein family are known, so far, in the Ascomycota, a branch of the Fungi, and contain an HD domain (pfam01966), found typically in various metal-dependent phosphohydrolases. The only characterized member of this family, from the soil fungus Myrothecium verrucaria, is cyanamide hydratase (EC 4.2.1.69), a zinc-containing homohexamer that adds water to the fertilizer cyanamide (NCNH2), a nitrile compound, to produce urea (NH2-CO-NH2). Homologs are likely to be nitrile hydratases.	1.19484e-13
NZ_CP032155.1\|WP_168215103.1\|4775931_4776555_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236607	PRK09648, PRK09648, RNA polymerase sigma factor ShbA.	3.53531e-101
NZ_CP032155.1\|WP_036346100.1\|4790604_4790907_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.79211e-48
NZ_CP032155.1\|WP_149381383.1\|4778939_4780577_-\|CocE/NonD-family-hydrolase	gnl\|CDD\|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	1.18292e-91
NZ_CP032155.1\|WP_036340680.1\|4774205_4774610_+\|DUF5319-domain-containing-protein	gnl\|CDD\|379954	pfam17252, DUF5319, Family of unknown function (DUF5319). This is a family of unknown function mostly found in Actinobacteria.	6.73073e-61

>NZ_CP032155.1|WP_149381390.1|4782229_4783264_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MRATLMYEAGDVRVEDVPDPVLKDPTDAIVRVTRSCICGSDLWPYQSMPHKDGGRRMGHEFIGIVEDVGADVGGLQRGDLVVAPFVWADNTCDFCREGLQTSCRHGGGWGARGVDAGQGEAVRVPQAQGTLVKLPVAEDSSLMPSLLTLSDVFCTGHHGVVTARVRPGSSVTVIGDGAVGLCAVLAAKRLGAEQIILNGRHTTRTDLGRDFGATDVVAERGDEAVEKIRELTGGDGTHAVIECVGTEQSLVTALGAVRAGGAVSRLGVSQYRNVPLGFDTMMRNITLTGGAAPARAYIEELMPDILEGVIEPGRVFDRVIGLDETPDGYRAMADREALKVLIAP
>NZ_CP032155.1|WP_149381387.1|4781508_4782180_-|glycoside-hydrolase
MLLVVNVFAGARGRWLAVVASVTVAGAMFYAQSTETKCCVAAPTVSPAAQTAPAADVPRIAQPTEAELLAASAPVTGGNFQLAMPRGIAPEQGLQIHTIWVARAISVMFLEIKTIGGYRQDPLKWHPNGLAIDVMIPNYHTPEGIELGNQIAGFALANAKRWGVLHVIWRQGFYPGIGAPSWTADYGNETANHFDHVHIATDGGGYPTGRETYFLGSMQSGPA
>NZ_CP032155.1|WP_149381385.1|4780578_4781505_-|DUF4349-domain-containing-protein
MRTSRGRLVVLAVAGIVALSPLTACAGSNPHSPTAPAPAVGSAEGAGAPMPQDAPGQPPMAKRDVVKTASMSISVAHPAEAADKAAVIVEDAKGRVDSRSEDAGSGTGRARSTVVLRVPAAKLDETLRELKTLGTVEHVQVSADDVTAQRVDLDARITALQTSVDRLLGIMRDAKDPDSLIKAESALSERQADLDSLRAQRQALGDQIDYSTVDVTFIAQEIGGPAPTEYRGFFGQIERGWDTMVSVAGNLVLLFGLLLPWLAVLAVAGVIVYLIVRFAKARQPQPQPGLPPQPATVGAPEQDEAPPS
>NZ_CP032155.1|WP_149381383.1|4778939_4780577_-|CocE/NonD-family-hydrolase
MAPRYDRPWRRPGAAAYACRRIRAFLRPPVTVVPAPDDLIKDRDVAVRMRDGVTLRVNVYRPPGEGPFPVILSVHPYGKDALPRRTRRGWRLNLQFRIMNQPAPFQISSETGWEAPDPVAWVARGYVVINADARGAGTSGGTGSLLSDDEARDTYDLIEWAGTQPWSNGRVGMLGVSYLALSQYKSAALRPPHLAAICPWEGFTDAYRDFMTPGGVPERGFSVIWQTLTRRVARLSVDIGEQRRRHPLRDAWWQSITPDLARIEVPILACASFSDHNLHSQGSWRLIEQAGSPERSAYTHRGGKWAVFYSDEAQRAQTAFFDRHLRNLDVPALPRVRLEVRERRDAVVAVRTENEWPLDRTRWTALYLGDSGSLAERAPSTRGAATFRLRRQAVAFSHRFDRDVELTGPMSLRLRISLDGADDAHLFVGVEKWSDGQYVPFEGSYGYGRDRIADGRLRLALRDSLDALTPLQPGEVVDADITLSASSTLFRAGDELRLLIAGRYLEPFNPLFGHLPARYTPSRRGSAVVHWGPGASALTVPVIAG
>NZ_CP032155.1|WP_149381381.1|4778128_4778878_-|NAD(P)H-binding-protein
MRIAVAGATGNIGARTVAALERDGHEVVRISRSAGVDLISGDGLDAALTGVDAVVDAISAPPMGVDETREYFATTTTNLLAAEQRAGVRHHVLLSIVGIHRLDAGTAHHVGKVAQESLIEAGPVPWTIVPATQFHDFAATVAGWTEQGGVALIPPLLLQPIAPNDIADVLAEIAVGAPQGRYVDVAGPETQDLVDMARRTHAVQGKSVTLVPTWDGPQGVEFAGNVLLPGDGARIAPTTFEQWLAAGAQ
>NZ_CP032155.1|WP_149381379.1|4777785_4778076_+|WhiB-family-transcriptional-regulator
MPQPQQLPGPNADIWDWQMQGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRSCPVIAQCRSHALAVAEPYGIWGGLSEAERELLLKRGIRRTA
>NZ_CP032155.1|WP_149381377.1|4776597_4777407_-|hypothetical-protein
MDVSALTAAAFGDHPGCWPLPAAHTPEQLWHRAVAAAGQGRYSSARADLAALRRRDPAGTFASLSLSTEASLLRQLGGHRPAAGWDGRALALTQTSGDHSMAVQARADAVVGLAADALGVGRLAASARLLERAGELTRGSGVPRLAIRLEWVSAELAMAGGRGEEAVMHARRGVEIAESATPALRRHRVKSDVVLAAALCCAGAIEPARAVADAALRDTETYGLVPLRWALACLLADIGCASLTSQQVSAIRDDCAGLITRRGGRWSGR
>NZ_CP032155.1|WP_168215103.1|4775931_4776555_-|sigma-70-family-RNA-polymerase-sigma-factor
MPGSVPYVTLEISPSMTIPGERLDAAVAEAVAGSRDALREVVETIRPIVVRYVRARLGATERVGLSADDVAQEVCLAAIQALPRYQDQGRPFLAFVYGIAAHKVADAHRAAARNRSDPTDVVPERFSLDAGPEQMAMQSDSAARMTKLLEILPEKQREILMLRIVVGLSAEETADAVGSTPGAVRVAQHRALAKLKTEITAAGNGYA
>NZ_CP032155.1|WP_149381375.1|4774649_4775939_-|hypothetical-protein
MPDFGRSSRNDDPSLDAILASERFIDALASGHPVAPHDRADAELADLLGGWRDEMRWPPATGLITERDAVTALRAGLAEKQSSGRSRRGLSIVGAAAAGVLALGGFGAVVAGAGPGDALYGLRTWLFGAPTQVRDDQVALASAKEQLQQVQQLVAQGDWQQAQAKLVEVNSQVSAVADQPEKQQVLDQWNQLSAKVVQKDPEATVPPGITYTVPASATDLVPAVITPTDGPEVPPTSVPGLPSITISTTPDGTGTVGPSTSETPTSPVEQTDPATTTTVPSTTTVAPTTTTQPTTTEPTTPTSATTTTTRLPTTTTTTTTLAGTTSSPSSAAQSPAATTTPAAPQSPAAAATSSAVVEQSSASTAPSVAATATATATATVPQTIASIPSTVIQTPRMQSPGGVMTTTMMFPMPQAPALPQLPKLPSFGG
>NZ_CP032155.1|WP_036340680.1|4774205_4774610_+|DUF5319-domain-containing-protein
MRDHLPPGLPPDPFADDPADPSAALDALEPGQPLDPQERAAVEADLADLAVYEALLAHRGIRGLVVCCDECQQDHYHDWDMLRANLLQLLVDGTVRPHEPAYDPEPDAYVTWDYCRGYADASLNEATSDYDGFR
>NZ_CP032155.1|WP_149381392.1|4783483_4784473_+|IS481-family-transposase
MSHRNAPLSETGRLRLARCVVEDGWSLRRAADRFQVAVTTASRWASRYREYGPAGMVDRSSRPHRCPNQTPTRTERRIIKVRVIRRWGPARIGYLLGLHPSTVHRVLTRYGMAKLRWLDRGTGCVIRRMQPAECGEMVHIDVKKLGKIPAGGGWRMLGRSVGNRNHQADKSSGQTNKRRQPVRGYHFLHTAIDGYSRLAYSEILSDERKDTAAAFWLRANTWFAQHGINVRKVLTDNGSCYRSHPFRDALGTIEHRRTRPYRPQTNGKVERFHRTLAEEWAYARLYRSDTERCDEFITWLHTYNYHRGHTALGGQPPAARVPNLSGQYT
>NZ_CP032155.1|WP_149381394.1|4784469_4785048_-|cyanamide-hydratase
MFPTTTAATAAASVATRFYTPALFNHCARSYVWGVKYAVAHDISFDDELYFVSAMLHDLALTDPFDSHRVAFEEAGGDLAWVFGMAAGWPAERAARAEEIIVLHMRDDVPANTDPESHLLQVATAWDVAGRRPEEFGAQARAEVLEQYPRLAFGEEFLACFDDQARRKPDGAAAASLASDGAARIRANPLDH
>NZ_CP032155.1|WP_149383690.1|4785110_4785266_-|excalibur-calcium-binding-domain-containing-protein
MGVAAPAHAQPTAPFKNCTAAKAAGYCDIPTDSPLYTPGQDRDSDGLACEC
>NZ_CP032155.1|WP_149381396.1|4785473_4785992_+|hypothetical-protein
MTTECRRALITVAAALAALALSAAPAHADPLPVACTPANVVDNVCTARLTSVTADAVNGTITGAPVGGGAAITLAGQGDAYLKSVGFGDSAPENIQRWDSTIDSVSRLSVDQFDPSWYANAKTKVFMPRTLNDLATQFPPDVLVVRFTTDDAQPGAFRLVSIQPTPPGNPIS
>NZ_CP032155.1|WP_149381398.1|4786025_4786277_-|hypothetical-protein
MIDAVEKAMRNMPSAKGKDAGVACIVGFIFGGIGLAIYFRNIADLFLPLAVSLALSIVAGGIGFLAGALVAALWGYFRVQLSQ
>NZ_CP032155.1|WP_149381400.1|4786419_4786890_+|OsmC-family-protein
MTADISDGHAASLEGTVTVTETGTGTYTQTITAGKHQLSADEPLPFGDDAGPTPYDLLLAGLGACTSMTVRMYANKKGWPLERVEVSLRHTRIHAEDCAECETKKGWVSHIDRTITVVGDLDDTQRERLLAIAERCPVHQTLTSEVDIATSLAVLS
>NZ_CP032155.1|WP_168214947.1|4786882_4787245_-|hypothetical-protein
MPPPIVPWALAIATASAIAAAAPACADSLDPIPGEGFFLVGRDIAPGLYNTTGSAAPFAVYINDVPTQDSMCVWFTYSTPDANKDHVVATNMSIGPMNAAINSTVRAFESHNCQPWTRVS
>NZ_CP032155.1|WP_149381403.1|4787323_4788829_-|HAMP-domain-containing-protein
MERIWQWAWDRFRSRFSWAAWLLTFLLAYPVYVAWSLAIVAFERSDRYAAAAAVTAVVVLGYLFSVVIPGSEDPRIIERWAAGEGVDRETALCATYDYGRKLIVRGMLFTFPWVAAQFVAVGMIAGAGGSRLIQYAIVGALAGTAGQLITNHSYVESTLRPARAAITSNTEIGDYLPRSRPAFSTWTNAAILGVGFAFAVVGAILGAVFDVARHGPLLAMLIGGVLVLVVGPSLWAAYSPLLQPIHDLTAATMRVAHGDFSQRLPVVQDDDLGVLAASFNRMQAGLTERQRLQAAFGTYVDPVLAARLLEQGDDIFTGERREVTVMFIDIRDFTPFAEAHSAEDTVARLNALFELVVPAVVDAGGHINKFLGDGAMVVFGAPNDLTDHADAAAATALLIHRRVAERFGGELRIGIGINTGKVIAGTIGAGSHLEFTLIGDTTNVAARVEQLTKTTGDVILLTAQTVDAFRALPAGLVDRGAYALKGKSTPTKVFGLNPATT
>NZ_CP032155.1|WP_149381405.1|4788889_4790518_-|chaperonin-GroEL
MSKLIEFDETARRAMEIGVDKLADAVKVTLGPRGRHVVLAKSFGGPTVTNDGVTIAREIELEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQAIIKNGLRNVAAGANPIALGSGIGRAADAVSEALLASATPVAGKTGIAQIATVSSRDEEVGELVGEAMTKVGTDGVVSVEESSTMNTELEITDGVGFDKGFISAYFVTDFDLQEAVLEDALVLLHRDKVSSLPDLLPLLEKVAQAGKPLLIVAEDVEGEALSTLVVNAIRKTLKAVAVKAPFFGDRRKAFLDDLAVVTGGQVVNPDVGLLLREVGIEVLGTARRVVVSKDATVIVDGGGAADAIEGRVKQLKSEIEASESDWDREKLQERLAKLAGGVAVIKVGAATETALKERKHRVEDAVSAAKAAVEEGIVAGGGSALVQANKALDALRAEVSGDEALGVEVFASSLSAPLFWIATNAGFDGAVVVNKVGELSTGHGFNAATLTYGDLIADGVIDPVKVTRSAVLNAASVARMVLTTETAIVEKPVDADEHAGHGHGHHGHAH
>NZ_CP032155.1|WP_036346100.1|4790604_4790907_-|co-chaperone-GroES
MVAVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVNK

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Crispr_ID: NZ_CP032155_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_10

5301340-5301432

Orphan

Consensus_repeat	Method
CCCCCGCCAGTCGTGCATCCAGGAGTGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_10

>merge|NZ_CP032155|10|5301340-5301432|CRISPRCasFinder
CCCCCGCCAGTCGTGCATCCAGGAGTGCCGGCCGCCCCCCGCGCCCCCCCGCCCCCCCCCCCCCCCCGCCAGTCGTGCATCCAGGATGTGCCG

>NZ_CP032155|10|10|5301340-5301432|CRISPRCasFinder
CCCCCGCCAGTCGTGCATCCAGGAGTGCCGG	CCGCCCCCCGCGCCCCCCCGCCCCCCCCCCC
CCCCCGCCAGTCGTGCATCCAGGATGTGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149382282.1\|5308746_5309571_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181113
NZ_CP032155.1\|WP_149382265.1\|5301004_5301337_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227803
NZ_CP032155.1\|WP_149382272.1\|5303650_5304499_-\|NAD-binding-protein	unknown	unknown	gnl\|CDD\|224995
NZ_CP032155.1\|WP_149382259.1\|5295285_5295567_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149382280.1\|5307509_5308724_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP032155.1\|WP_149382256.1\|5293038_5294277_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP032155.1\|WP_149382250.1\|5288855_5290127_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP032155.1\|WP_149382263.1\|5299590_5300958_-\|DUF222-domain-containing-protein	unknown	unknown	gnl\|CDD\|367155
NZ_CP032155.1\|WP_149383733.1\|5294380_5294689_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_149382261.1\|5295712_5296933_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|227277
NZ_CP032155.1\|WP_149382273.1\|5304495_5305248_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236094
NZ_CP032155.1\|WP_149382270.1\|5303210_5303648_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP032155.1\|WP_149382267.1\|5301759_5302329_+\|TIGR03086-family-protein	unknown	unknown	gnl\|CDD\|274424
NZ_CP032155.1\|WP_149382276.1\|5305278_5306745_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|275104
NZ_CP032155.1\|WP_149382284.1\|5309567_5310926_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP032155.1\|WP_149382269.1\|5302347_5303214_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|274926
NZ_CP032155.1\|WP_149382252.1\|5290113_5291385_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|234856
NZ_CP032155.1\|WP_149382257.1\|5294690_5295323_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP032155.1\|WP_149382254.1\|5291412_5292951_-\|biotin-carboxylase	unknown	unknown	gnl\|CDD\|227136
NZ_CP032155.1\|WP_149382278.1\|5306919_5307513_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149382282.1\|5308746_5309571_+\|SDR-family-oxidoreductase	gnl\|CDD\|181113	PRK07775, PRK07775, SDR family oxidoreductase.	4.16118e-180
NZ_CP032155.1\|WP_149382265.1\|5301004_5301337_-\|hypothetical-protein	gnl\|CDD\|227803	COG5516, COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding [General function prediction only].	2.2404e-10
NZ_CP032155.1\|WP_149382272.1\|5303650_5304499_-\|NAD-binding-protein	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.99295e-62
NZ_CP032155.1\|WP_149382280.1\|5307509_5308724_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.43346e-101
NZ_CP032155.1\|WP_149382256.1\|5293038_5294277_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.0783e-88
NZ_CP032155.1\|WP_149382250.1\|5288855_5290127_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	3.22044e-82
NZ_CP032155.1\|WP_149382263.1\|5299590_5300958_-\|DUF222-domain-containing-protein	gnl\|CDD\|367155	pfam02720, DUF222, Domain of unknown function (DUF222). This family is often found associated to the N-terminus of the HNH endonuclease domain pfam01844. The function of this domain is uncertain. This family has been called the 13E12 repeat family.	1.20879e-71
NZ_CP032155.1\|WP_149382261.1\|5295712_5296933_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|227277	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription].	4.42772e-125
NZ_CP032155.1\|WP_149382273.1\|5304495_5305248_-\|SDR-family-oxidoreductase	gnl\|CDD\|236094	PRK07774, PRK07774, SDR family oxidoreductase.	8.22219e-162
NZ_CP032155.1\|WP_149382270.1\|5303210_5303648_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	6.84557e-13
NZ_CP032155.1\|WP_149382267.1\|5301759_5302329_+\|TIGR03086-family-protein	gnl\|CDD\|274424	TIGR03086, TIGR03086, TIGR03086 family protein. This family, like pfam07398 and TIGRFAMs family TIGR030834, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized.	1.50531e-34
NZ_CP032155.1\|WP_149382276.1\|5305278_5306745_-\|aldehyde-dehydrogenase	gnl\|CDD\|275104	TIGR04284, aldehyde_dehydrogenase, aldehyde dehydrogenase, Rv0768 family. This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP032155.1\|WP_149382284.1\|5309567_5310926_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	5.21363e-79
NZ_CP032155.1\|WP_149382269.1\|5302347_5303214_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|274926	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family. Members of the PPOX family (see pfam01243) may contain either FMN or F420 as cofactor. This subfamily consists of proteins mostly from species that lack the capability to synthesize F420, and therefore most likely all bind FMN.	6.4346e-10
NZ_CP032155.1\|WP_149382252.1\|5290113_5291385_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP032155.1\|WP_149382257.1\|5294690_5295323_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.03449e-08
NZ_CP032155.1\|WP_149382254.1\|5291412_5292951_-\|biotin-carboxylase	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	8.72034e-145
NZ_CP032155.1\|WP_149382278.1\|5306919_5307513_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	5.91379e-08

>NZ_CP032155.1|WP_149382265.1|5301004_5301337_-|hypothetical-protein
MPDEAAIGRVNDAAACAPSTRSLVQTSAGWAAITTRHAPADRPYRLSLATVAESLIDVLTGPGQDRLRRCQNPTCSMLFVASDARRKFCTQNICANRTRVARHYQRHRPD
>NZ_CP032155.1|WP_149382263.1|5299590_5300958_-|DUF222-domain-containing-protein
MSSIDVVLGVLDDAVEALAAVDLEMLDAPERFAVLERLETVRRRQVAVSHTLVARLERFEGCPPVPITLADVLRISSREARRRIRDAEQMAPRRALTGEPLPPVLPETSKAWHAGELDGEHLRVIQKFFRDLPDHVAPIDREKAERTLAQKATALRPDQLDKVAHRLALHLNPDGTFSDEDRARKRGFVWCGGQQLDGMSVGRLVADPELRSLVDAWMAKFAAPGMCNPAEDSPTTTPSEQVAERDARSYAQRQHDALKALVRGQLGDPKFGQHNGLPVTVIATATVQDLQAQAGHAVTASGTLLPIPDLIRMASHAYHYLALFDGVDGRGLWLGRTKRIATADQRIMLHAKCRGCTRPGCDAPGYHSGVHHAAQDWKSGGTTDVDDLTLACPPDNQLVETGGWTTRQLPDGSTEWIPPPDLPMLRGGVNDYHHPERLLEGDSGPPSNDVGNDAA
>NZ_CP032155.1|WP_149382261.1|5295712_5296933_-|sigma-70-family-RNA-polymerase-sigma-factor
MGSLDGVFRREWGPAVAALARWSGDLDIAEDAVQEACAEALRSWPRDGPPDNPGAWLVTVGRNRARDRLRRESVRPGKELLAVQGDGQADDRVVHGVRDDELRMIFTCAHPALERSSQLALTLRLVSGLTVPEIARALLLTETAVGQRITRAKSKIRNANIPLRVPPPELLAERTPHVLSCIYSVFTEGYWSTAGPSAIRDELCDEGVRLAGELCVLMPAEPDARALYALVLLHDSRRSTRVDTDGALIPLEEQDRSRWDRGRIARGLDGLRRAEGAAGPYLPQAVIAAAHATAPSWEQTDWRTICRAYGQLLRQTDSPVVRANRALAIGLRDGPDAGLAALERVAHDPRLARSALVPTVRADLLRRAGRHAEAVRWYRDAIDLNGSEPGKAFLRRRIAECGGAIA
>NZ_CP032155.1|WP_149382259.1|5295285_5295567_-|hypothetical-protein
MTSMTMYDQSWTAPTMLSLWTEPLTKRGRVVRQASKWAGVIDTTVTVLCPPVVSVCAIFAAVVWPAHDPSELVGHAATSAPINALVQESAPAP
>NZ_CP032155.1|WP_149382257.1|5294690_5295323_+|TetR-family-transcriptional-regulator
MRTHGWSGAAPATDEEAVARILAAANKAIDSHGADLSIADVARTLGVTRQTVYRYFPSTDALLQASAMSAATGFLDRLADHLAGITDPADAVTEGIAAAVEWLPHDKHMGLLLGPERSSTFSAEVTSDVALAFAGSMLRRFDVDWAAAGFSDNDLDELGEHLLRIIQSFVLDPGRPPRHGDQLRQYLRRWVGAALLAPAREPARSPAPGR
>NZ_CP032155.1|WP_149383733.1|5294380_5294689_+|hypothetical-protein
MTISIIFMVLTVVVGAGAAFLGLFSLAFLDYCPPATCSAEGAVSAVMTSVAVAAGFGVIGIVVAIVQLARRKTAWPFAVGTLVLCLIVLLVGGVAYYSAVGG
>NZ_CP032155.1|WP_149382256.1|5293038_5294277_+|cytochrome-P450
MTTANVCPFGAGFDFTDPDLIKEGMPVAEFAQLRQTAPVWWNEQPLGSTVFDDGGYWVITKHRDIRDISRDGDLWSTNQKGVVMRFADDMTADQVEITKALLINHDAPEHTRLRKLVSRLFTPRAVAKLEEKLADAARDIVAAAAAKDTGDFVDDIAMQLPLLAIADLLGVPEADRQKLFHWTNSIMNTDDPEFNDVDPIEANAELMGYAYSMAEDRRKCPADDIVTRLVEADLDGESLSEVEFAFFVILLAVAGNETTRNAMTHGMNAFFENPDQWELFKRERPETTADEIVRWATPVHCFQRTATADVELGGVTIRKGQRAGLFYSSANYDEEVFDNPFQFNILRDPNPHLGFGGNGAHFCIGANLARMEIKLIFNEIANQIPDISKLGQPERLRSGWLNGVKHLPVSYR
>NZ_CP032155.1|WP_149382254.1|5291412_5292951_-|biotin-carboxylase
MTDRPDLAELLRRRALTEDTARPEAVSRRHAAGGRTARENIADLVDADSFVEYGRFAIAAQRRRRDLDDLIARTPADGLIAGTAQVNGKPCAVLSYDYTVLAGTQGFVGHRKKDRLFELIERMRLPTIFFAEGGGGRPGDTDVPTVSSLETRAFKLWAALSGVVPRIAIVKGRCFAGNAVIAGCSDLIVATADSSIGMGGPAMIAGGGLGDVEPDAVGPISVQAPNGVVDVVVADEAEAVAVAKRLLGYFQGVAAPGAVADQTALRTVIPERARRAYPIKPVIETIADQGSVTFLREKFAAEMVTALARIDGRPVGVIANNTMVMAGAITAAAADKAARFLQLCDTFGLPVVSLIDCPGYMVGPAAEAEALVRRASRMLVAGAALRVPLVAVVLRRGYGLGAQAMTGGSLHEPLLTVAWSNAHLGPMGLEGAVRLGMRKELDAIADEAEREQRVAEATAAMEENAKALNAAQIFEVDDVIDPAETRGLIVATLAAAAARGDLPAPRRFVDTW
>NZ_CP032155.1|WP_149382252.1|5290113_5291385_-|phosphoribosylamine--glycine-ligase
MRVLVIGSGAREHALLLGLRRDPQIDFLAVAPGNAGTSAVAEQHEVDVTSAEAVTALARKLEVDLVIIGPEVPLVLGVADAVRAAGIACFGPSKDAARIEGSKAFAKDVMAAAGVRTAGSDTVDNPAHLDAALDRFGPAAGQPAWVVKDDGLAAGKGVVVTDDRDVARAHAASLLDSGHPVLLESFLDGPEVSLFCLVDGATVVPLLPAQDFKRVGDNDAGPNTGGMGAYSPLPWLPSDVLSAIVSGVVEPVAAELVRRGCPFSGLLYAGLAITSNGPAVIEFNCRFGDPETQAVLALLESPLGQLLHATATGTLADVGPLEWRDGYAVTVVVAAENYPGRPRVGDVITGSEADGVLHAGTARRDDGTIVSSGGRVLSIVGTGADLVAAREEAYRIVSSVRLPGSHFRSDIGLAAAEGRITLA
>NZ_CP032155.1|WP_149382250.1|5288855_5290127_+|cytochrome-P450
MTVESPPLSPRPYHPLDISAPDFWAADFATRDRTFAQLRAADGLSWHPPVSSVFPHSETGYWAITRHADIKYVSQHTDIFSSALGMSVDPLPAEIQQATSFFLAMDPPEHTLYRRLISATFTPKQVRRIEAQIQANATDIVDRLIDRLRDGEEIDFVTECSAKLPMRTVSDMIGIAPENQEAVAYAAESLFSATDDDYASFEERATHALTQIGILTSSGIELAQLRRREPHDDLMTNIVNAEVDGHQLTDIQIGSFMVLLASAGNDTTKQTTSHAFKALADNPGQKAWLMEDFDTRITPAVEEFIRWATPVLNFARHATADTELAGTKIKAGEKVALFYCSANRDDAVFDRPDEFDISRSPNPHFGFGGGGPHFCLGANLARTELRQLFHQLLTRLPDVQVGEPEYLHSNVIHGVKRLPVKLV
>NZ_CP032155.1|WP_149382267.1|5301759_5302329_+|TIGR03086-family-protein
MDPLDVLRRADRRLVDLVTTLDTTDLGLPTPCTGWDVRSLLSHTIASIDAFAAAVDGGDGPSEEELFSGADILGSDPLAVARRSIERSQRAWATITDWQHPLTSVLGEMPAAQAVGIVTYSTLIHSWDLAVAINRVVEFDEAEAALAEQVGSTLVPALRPQDLFGPEVHTNGAATPTQRVVAFAGRHPL
>NZ_CP032155.1|WP_149382269.1|5302347_5303214_+|pyridoxamine-5'-phosphate-oxidase
MTHEERLAAVGFHSGELAVQSRAGVRARAARLAPMASRGRLGAGTATCLASARLAVLTARDPDGQLWISPLSGEPGFLAAVTPTRLHIDVELPDVDPLAAAPTDQPAGLLVIDFAARRRYRINGQLTQRDSLGFAIDVDQAYGNCPKYIHPAAQPMADPRQTDRRRVFTGTALRPEDRELIRRSATFFLGTTHPTSGNDASHRGGPAGFVHAEAGSLWWPDYPGNDMFNSFGNLAVDPSAALLFADAGTTVQLSGSAAVDWDVEQSDDDLRTGRRVVFAAQRVIATRR
>NZ_CP032155.1|WP_149382270.1|5303210_5303648_-|carboxymuconolactone-decarboxylase-family-protein
MDELRRKGLDKMNEVYGWEMPDSPGDYFALTADHLFGTIWSRPGLSMRDKRIMTLTVVTALGISDLAEIQANAALHNEELTPEELKEMAIFLTHYLGFPLGSKLDGVVTKVVCKRKKAAEAGQGEDKKANVNDALKMHSGTKLDD
>NZ_CP032155.1|WP_149382272.1|5303650_5304499_-|NAD-binding-protein
MSDLKVGYIGLGNQGLPMAKRLAEWPGGLIVFDVRTEAMTPLAELGATLADSVADVATADVIEVTVLNDEQVRDVVGELAAHAKPGTVIAIHSTIEPDTAAELAEQLRPKGIHVVDAPVSGGAGAADKGELAVMVGADDEAYELVKPVFKKWASMVVRAGEPGAGTRMKLARNMLTYIGFAAACEASRLAEAAGIDLQKLGRVVRHSDAQSGGPGAIMVRDDTKPLQPDHFVYNMFVHTRGLAEKDLKLALGLGEANGVELPLAEIALRDLAAGLGVPNTKE
>NZ_CP032155.1|WP_149382273.1|5304495_5305248_-|SDR-family-oxidoreductase
MGQFDNKVAIVTGAGGGIGQAYAEALAREGAAVVVADINTDGAQKVADGIKGEGGTALALPVDVSDPVSAKAMADQTLAEFGGIDYLVNNAAIFGGMKLDFLITVDWDYYKKFMSVNLDGALVCTRAVYKKMAKRGGGAIINQSSTAAWLYSNFYGLAKAGVNSLTQQLATELGGQNIRINAIAPGPINTEANRTTTPQEMVADIVRGIPLSRMGEVDDLVGMCLFLLSDQAKWITGQIFNVDGGQIFRS
>NZ_CP032155.1|WP_149382276.1|5305278_5306745_-|aldehyde-dehydrogenase
MAIAADKNSDLFINGELVPGGNGRYPTINPATEEVLGTAADGNAEDMSRAIDAARRAFDTTDWSTNTELRVRGIRQLRDAMKEHVEDLREMTMAEVGAPRTLTAAAQLEGPVDDLSFSADTAENYSWRQDLGIAAPMGIKTQRTIVREAVGVVGAITPWNFPHQINLAKLGPALAAGNTIVLKPAPDTPWCAAVLGELIAEHTDIPPGVVNIVTSNDHSVGAMLSSDPRIDMVSFTGSTNTGRAVMAAGAATIKKVFLELGGKSAFLVLDDADLAGACSMAAFTASMHAGQGCAITTRLVVPRARYDEAVEAAAATMGGIKAGDPTNPGTICGPVISERQRDRVQSYLDLAITEGGRFACGGGRPDDRDTGYFISPTVIAGLDNSARVAREEIFGPVLTVIAHDGDDDAINIANDSPYGLSGSVFSSDPERAQGVADRLRVGTVNVNGGVWYSADVPFGGYKQSGVGREMGLAGFEEYLELKVIATAV
>NZ_CP032155.1|WP_149382278.1|5306919_5307513_+|TetR-family-transcriptional-regulator
MSSDAAIAVNPNGDDVPRNRRQEETFRKVLRAGMEMLRESSYADLTVRAVAARAKVAPATAYTYFSSKNHLIAEVYLDRVLEVPYFTDVNEPRLHRVQQSLRSLALVIADEPEFAAACTTAVLSNDAGVVRVRDRIGAEIHKRIKSALGPDADPKIVSALEMTYFGALVHAGSGTLSYREVADRMEYVVSLILGENQ
>NZ_CP032155.1|WP_149382280.1|5307509_5308724_+|cytochrome-P450
MSVQSPDILLDPYNYDFHEDPYPYYKRLRDEAPLYYNEELKFWALSRHSDVLQGFRNSTTLSNKFGVSLDPASRGPHASKTMSFLAMDDPAHLRLRTLVSKGFTPRRIRELEPRVTEIATKHLDVLMEKAAAGDTVDYVDEFAGKLPMDVISELMGVPEADRVQVRAWADGVMHRDEGVTDVPPEAVEASLNLIVYYQAMVEERRTSPTEDLTSALLEAEIDGDRLTDDEVLGFMFLMVIAGNETTTKLLANAAFWGHKNPDQLAEVYTDLSRVPLWVEETLRYDTSSQILARTVAGDLTLYDTVIPDGDVVLLLPGSAHRDERAFDNPDDYLIGRDIGAKLQSFGSGAHFCLGAHLARMEARVALEELFKRIRGYEVDEANSVRVHSSNVRGFAHLPITVQPR
>NZ_CP032155.1|WP_149382282.1|5308746_5309571_+|SDR-family-oxidoreductase
MPRFDPLPDRRPSLVAGASSGIGEATAIKLAANGFPVALGARRVDKLQEIVDKIRADGGEAIAVHLDVTDPDSVKAAVEQTTAELGEIEVLVAGAGDTYFGKLDSISIDEFESQIQIHLVGAYRVASAVLPGMLERQRGDLIFVGSDVSLRPRPHMGAYGAAKAALVSMVTNYQMELEGTGVRASIVHPGPTKTSMGWSLPAELIGPALEDWAKWGQARHDYFMRAADLARAITFVAETPRGSFIANMELQPEAPLADNKDRQKLALGEEGMPS
>NZ_CP032155.1|WP_149382284.1|5309567_5310926_+|cytochrome-P450
MTITKEVQRVSGGEEEHGHLEEFRTDPIGLMQRIREECGDLGWFQLADKQVILLTGSEANEFFFRSPDADLNQAEAYPFMTPIFGEGVVFDADPERRAEMLHNTALRGEQMKGHAATIENEVRRMIENWGDEGEIDLLEFFAELTIYTSTACLIGLKFRNQLDSRFANYYHLLERGTDPLCYVDPYLPIESFRIRDEARASLVELVQEVMTGRIANPPTDKSDRDLLDVLVSIKDDEGNPRFSANEVTGMFISLMFAGHHTSSGTSSWTLIELLRNPDYYAKVQQELDDLYADGQEVSFHALRQIPNIDNALKETLRLHPPLIILMRVAQDEFEVQGYPIHKGQMVAASPAISNRIPEDFPNPDAFDPDRYEKPRQEDIVNRWTWIPFGAGRHRCVGAAFAQMQIKAIFSVLLREYEFEMAQPPESYQNDHSKMVVQLARPAKVRYRKRVKA

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Crispr_ID: NZ_CP032155_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032155_11

5473513-5473611

Orphan

Consensus_repeat	Method
ACTCGGAGGTCTTCGTCATGTCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032155_11

>merge|NZ_CP032155|11|5473513-5473611|CRISPRCasFinder
ACTCGGAGGTCTTCGTCATGTCACCCCGTCCCCCCCCGCCCGACGCGCAACGCCGTCCCGCGCGCGCGCCGCGAACTCGGAGGTCTTCGTCATGTCACC

>NZ_CP032155|11|11|5473513-5473611|CRISPRCasFinder
ACTCGGAGGTCTTCGTCATGTCACC	CCGTCCCCCCCCGCCCGACGCGCAACGCCGTCCCGCGCGCGCGCCGCGA
ACTCGGAGGTCTTCGTCATGTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032155.1\|WP_149382552.1\|5480881_5481490_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP032155.1\|WP_149382550.1\|5478453_5478990_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	unknown	unknown	gnl\|CDD\|184333
NZ_CP032155.1\|WP_149382538.1\|5471759_5472479_+\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP032155.1\|WP_168214974.1\|5468830_5469730_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP032155.1\|WP_149382530.1\|5465705_5466308_-\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP032155.1\|WP_149382548.1\|5477881_5478370_+\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP032155.1\|WP_168215117.1\|5475291_5476347_-\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|274833
NZ_CP032155.1\|WP_149382528.1\|5464460_5464862_-\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|238298
NZ_CP032155.1\|WP_149382542.1\|5474338_5475313_-\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP032155.1\|WP_149382546.1\|5476334_5477717_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|200042
NZ_CP032155.1\|WP_149383750.1\|5482277_5483324_+\|allantoicase	unknown	unknown	gnl\|CDD\|237319
NZ_CP032155.1\|WP_149382527.1\|5463942_5464464_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|223872
NZ_CP032155.1\|WP_149382534.1\|5469726_5470908_+\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225052
NZ_CP032155.1\|WP_168214976.1\|5478999_5479962_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP032155.1\|WP_149381284.1\|5472475_5473465_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032155.1\|WP_149382536.1\|5470949_5471723_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP032155.1\|WP_149382532.1\|5466325_5468656_-\|ATP-dependent-zinc-metalloprotease-FtsH	unknown	unknown	gnl\|CDD\|273520
NZ_CP032155.1\|WP_168214975.1\|5473730_5474342_-\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP032155.1\|WP_149382554.1\|5481520_5482213_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032155.1\|WP_168214973.1\|5464854_5465709_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|238380

Protein	Function_ID	Function_description	E-value
NZ_CP032155.1\|WP_149382552.1\|5480881_5481490_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.87844e-12
NZ_CP032155.1\|WP_149382550.1\|5478453_5478990_+\|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase	gnl\|CDD\|184333	PRK13798, PRK13798, putative OHCU decarboxylase; Provisional.	7.09817e-78
NZ_CP032155.1\|WP_149382538.1\|5471759_5472479_+\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	5.27293e-59
NZ_CP032155.1\|WP_168214974.1\|5468830_5469730_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.96005e-31
NZ_CP032155.1\|WP_149382530.1\|5465705_5466308_-\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	2.07903e-116
NZ_CP032155.1\|WP_149382548.1\|5477881_5478370_+\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	9.86581e-84
NZ_CP032155.1\|WP_168215117.1\|5475291_5476347_-\|zinc-dependent-metalloprotease	gnl\|CDD\|274833	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated. A phylogenetic tree of the DUF2342 family (TIGR03624) consists of two major branches. One of these branches, modeled here, is observed almost entirely to be found in coenzyme F420 biosynthesizing species of the Actinobacterial, Chloroflexi and Archaeal lineages. The few organisms having genes within this family and lacking F420 biosynthesis may either have an undiscovered F420 transporter, or may represent F420-to-FMN revertants. This family includes a Chloroflexus Aurantiacus protein whose crystal structure has been determined (PDB:3CMN_A). This has been annotated as a putative hydrolase, but the support for that assertion is untraceable. There is no cofactor present in the structure.	1.59885e-146
NZ_CP032155.1\|WP_149382528.1\|5464460_5464862_-\|dihydroneopterin-aldolase	gnl\|CDD\|238298	cd00534, DHNA_DHNTPE, Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenotype and the fact that folX is not present in H. influenza. In addition both enzymes have been shown to be able to compensate for the other's activity albeit at slower reaction rates. The functional enzyme for both is an octamer of identical subunits. Mammals lack many of the enzymes in the folate pathway including, DHNA and DHNTPE.	2.68995e-43
NZ_CP032155.1\|WP_149382542.1\|5474338_5475313_-\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	2.73017e-53
NZ_CP032155.1\|WP_149382546.1\|5476334_5477717_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|200042	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family. In E. coli, this protein is known as penicillin binding protein 4 (dacB). A signal sequence is cleaved from a precursor form. The protein is described as periplasmic in E. coli (Gram-negative) and extracellular in Actinomadura R39 (Gram-positive). Unlike some other proteins with similar activity, it does not form transpeptidation. It is not essential for viability. This family is related to class A beta-lactamases. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	8.43509e-96
NZ_CP032155.1\|WP_149383750.1\|5482277_5483324_+\|allantoicase	gnl\|CDD\|237319	PRK13257, PRK13257, allantoicase; Provisional.	1.76807e-171
NZ_CP032155.1\|WP_149382527.1\|5463942_5464464_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	9.54744e-52
NZ_CP032155.1\|WP_149382534.1\|5469726_5470908_+\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|225052	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion].	9.80847e-49
NZ_CP032155.1\|WP_168214976.1\|5478999_5479962_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	3.10787e-66
NZ_CP032155.1\|WP_149381284.1\|5472475_5473465_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.64627e-21
NZ_CP032155.1\|WP_149382536.1\|5470949_5471723_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	7.11239e-18
NZ_CP032155.1\|WP_149382532.1\|5466325_5468656_-\|ATP-dependent-zinc-metalloprotease-FtsH	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP032155.1\|WP_168214975.1\|5473730_5474342_-\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	2.05224e-94
NZ_CP032155.1\|WP_168214973.1\|5464854_5465709_-\|dihydropteroate-synthase	gnl\|CDD\|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	2.83809e-110

>NZ_CP032155.1|WP_149381284.1|5472475_5473465_-|IS481-family-transposase
MSHRNAPLSETGRLRLARCVVEDGWSLRRAADRFQVAVTTASRWASRYREYGPAGMVDRSSRPHRCPNQTPTRTERRIIKVRVIRRWGPARIGYLLGLHPSTVHRVLTRYGMAKLRWLDRGTGCVIRRMQPAECGEMVHIDVKKLGKIPAGGGWRMLGRSVGNRNHQADKSSGQTNKRRQPVRGYHFLHTAIDGYSRLAYSEILSDERKDTAAAFWLRANTWFAQHGINVRKVLTDNGSCYRSHPFRDALGTIEHRRTRPYRPQTNGKVERFHRTLAEEWAYARLYRSDTERCDEFITWLHTYNYHRGHTALGGQPPAARVPNLSGQYS
>NZ_CP032155.1|WP_149382538.1|5471759_5472479_+|SIMPL-domain-containing-protein
MPIAGRRVVIALASAATAAAILTGCDSAPAVPANPRQVTVIGSGEVKGVPDTLTADVSVEATAADVTTAMNQANDRQNAVLNALNASGVDTKDISTTGVSLQPQYGDNSVITGYRANNSIQIKIRKLDTASQVLANIVSAGGAATRINSVSYSIEDDSKLVGDARARAFNDAKQRAQQYADLSGLSLGKIISISEAPGGTPPPPTPMPMPMRGEMASSVPLSPGQQTVSFSVTAVWELG
>NZ_CP032155.1|WP_149382536.1|5470949_5471723_-|MBL-fold-metallo-hydrolase
MAKLALTHLGGPTTLIEVDGWRILTDPTFDSPGRRYTFGWGTSSRKVAGPARPRDAVAPVDAVLLSHDQHADNLDDSGRALLAQAGTVVTTVPAARRLAAPNVRGLADWESTTLTAEGRPPLTVTATPARHGPRFSGPITGKVNGFALHRDGEDAAALWMSGDTVLYDGLREVARRMPVDVALLHLGGVRFGFTGPVRFTMTAREGLELTRLMRPRVVVPVHYEGWTHFREPEDVARQTLSELANVHWLTPGTPAEI
>NZ_CP032155.1|WP_149382534.1|5469726_5470908_+|LLM-class-flavin-dependent-oxidoreductase
MTQKPLNFGVFITPFHPVGQSPTVALEYDLERTVALDRLGFDEAWFGEHHSGGYELIACPEVFIAAAAERTKHIRLGTGVVSLPYHHPLMVADRWVLLDHLTRGRVIFGTGPGALPSDAYMMGIDPVEQRRMMQESLEAILALFRAGPDERVDRHSDWFTLRDAQLHIRPYTWPYPEISTAAMVSPSGPRLAGQLGTSLLSLSMSVPGGYAALEDAWGVVVEQAAKVGRPEPDRSSWRVLGIMHLADTREQAIEDCTYGLQDFANYFGAAGFVPLANDVEAAEQSPRQFVADYAAGGNCCIGTPDDAIAYITDLLDRSGGFGTFLMLGHDWADPQATYHSYELFARKVMPHFKGQLQAPRASHDWAQRKRNDLFGRAGEAIMKAIGEHAGEQT
>NZ_CP032155.1|WP_168214974.1|5468830_5469730_+|alpha/beta-hydrolase
MLASTERLVDVAEVRLRVLEAGDRGAPVVVLAHGFPELAYSWRHQIPVLAEAGYHVLAPDQRGYGGSSAPEAVEAYDIHHLTGDLVALLDSEVGGGAAQAVFIGHDWGAMVVWHTALLHPDRVRAVAGLSVPPIPRARSRPTERWREKFGEDFYMLRFQEPGKADAEMAADVAATMRSMFADLSPSAPPGWIGDDEFDHYVAEFGRTGFTGALNWYRNYDRNWESTPQLAEAHVTVPALFVGGTADPIAPTMNPARAREVVAGPYTERWIDGAGHWVQQERPEDVNRILLEFLREVESS
>NZ_CP032155.1|WP_149382532.1|5466325_5468656_-|ATP-dependent-zinc-metalloprotease-FtsH
MNRKNVIRTLTVVAVVLLLGWSFFYFSDDTRGYKPVDTSVAMSQITSDNVKSAQIDDREQQLRLELKNGNGDTENSNKVITKYPTGYGVDLFNALSAKSIKTNTVVNQGSILGSLLVYMLPLLLLVGLFVLFSRMQTGGRMGFGFGKSKAKQLGKDMPKTTFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKQNSPCIIFVDEIDAVGRQRGAGMGGGHDEREQTLNQLLVEMDGFGDRQGVILIAATNRPDILDPALLRPGRFDRQIPVTSPDLAGRKAVLRVHSQGKPMAPDADLDGLAKRTVGMSGADLANVINEAALLTARENGTIITAAALEEAVDRVIGGPRRKGRVISELEKKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTGGHAVSVPEDDKGLMTRSEMIARLVFAMGGRAAEELVFREPTTGAVSDIDQATKIARAMVTEYGMSAKLGAVKYGTEHGDPFLGRTMGTQSDYSHEVARDIDDEVRKLIEAAHTEAWTILTEYRDILDILAGELLEKETLHRKELEAIFGDVKKRPRLTVFDDFGGRIPSDKPPIKTPGELAIERGEPWPRPMPEPAFKKAIAQASAQAQAQQPRGGNGNGAHAGQQPQPGSSQPDYGAPAGWHAPGWPPQGGPQQGQQGQPHGQQGGYWYPPQPGWGQPHPQQGQQYPPYQPYPSPSHTGQHAKPQDDSGDDGDRSNPPSHG
>NZ_CP032155.1|WP_149382530.1|5465705_5466308_-|GTP-cyclohydrolase-I-FolE
MPQPNVSTWETPVFDQSRAEAAVRELLLAVGEDPDRHGLQDTPARVARAFREMFAGLYTDPDAVLNTTFDEQHDELVLVKDIPMYSTCEHHLVAFHGVAHVGYIPGEDGRVTGLSKLARVVDLYAKRPQVQERLTTQIADAVMRKLKPRGVIVVVEAEHLCMAMRGVRKPGASTTTSAVRGQFKTDNASRSEALDLILRK
>NZ_CP032155.1|WP_168214973.1|5464854_5465709_-|dihydropteroate-synthase
MTQSHGPRTLVMGVVNVTDDSFSDGGRYLDPARAVEQGLALAAQGASIIDVGGESTRPGAVRVDAAVESARVIPVIKELAAQGITVSIDTMHAAVAAAALDNGASIVNDVSGGKADPVMAPLVAEAKVPWVLMHWRSVRAEHPHDVPDYGDVVAEVRDDLLAGVDAAVAAGVDQANLIIDPGLGFAKTAQHNWALLHALPEFVATGIPVLVGASRKRFLGALLADADGTVRPPDGRETATAVISALAAVHGAWGVRVHDVRASVDALKVVGAWAGGREQAGADG
>NZ_CP032155.1|WP_149382528.1|5464460_5464862_-|dihydroneopterin-aldolase
MADRIELRGLTVRGNHGVFDHERRDGQDFIVDITVWIDLADAAASDDLADTFDYGTLAQRAAEIVGGPARNLIETVAGEIADDVMNDRRVHAVEVVVHKPNAPIPLTFTDVAVVARRSRRSGRGQIVPLGGEL
>NZ_CP032155.1|WP_149382527.1|5463942_5464464_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MTRVVLSIGSNLGDRVARLQAAVDGLGDMVRALSPVYETDAWGGVEQGPFLNAVVVADDPEADGHEWLRRAQALENANDRVREQKWGPRTLDVDLVTCHDGDTEVFSRDEGLTLPHPLAHLRAFVMVPWLAVDPDAELTVAGESQRVDRLLAELDAVDRDGVRLTPLVLRLGA
>NZ_CP032155.1|WP_168214975.1|5473730_5474342_-|hypoxanthine-phosphoribosyltransferase
MRLVVRPCSWHSVDVSAHELYPGDIKSVLLSQEQIHTRTAELATSVARDYADSLNGQDLLLLTVLKGAVMFVTDLARAIPLPTQLEFMAVSSYGSSTSSSGVVRILKDLDRDIHDRDVLIVEDIVDSGLTLSWLLRNLATRHPKSLRVCTLLRKPDAVRADVDIEYVGFDIPNEFVVGYGLDYAERYRDLPFIGTLEPKVYQG
>NZ_CP032155.1|WP_149382542.1|5474338_5475313_-|tRNA-lysidine(34)-synthetase-TilS
MDRPGAVAALRAGVAGFVTEHLPGATSWCVALSGGPDSLALAAAAAAALPTTALIVDHGLQPGSEQIAETARRQAHDLGCVDARVLRVQVGGDGGPEAAARAARYTALDAARADAPVLLAHTLDDQAETVLLGLGRGSGPRSIAGMRACDPPWYRPLLGVRRAVTHAACAELGLTPWDDPHNHDARFTRVRLRTEVLPLLEDVLGGGVAEALARTAAALREDTDALDEWAALARKNTAALGDTGDTVAVTALAALPTAVRRRVIRGWLLGGGAANLTDKQIRAVDALVTAWHGQGGVAVGSELRQQRLFAARRDGRLMMYTQPV
>NZ_CP032155.1|WP_168215117.1|5475291_5476347_-|zinc-dependent-metalloprotease
MRLMSSQVTVGRAVDWSFAGNVGARLARPGPAATDYTRSQAVDELSVAARKAEGPVREVTRMGGDAPVAEARIVDRQGWIRAASDSMRVMTGGTDTPSNPVTGRVTGAQTGAVLAFISSGILGQYDPFADTGTDDGLLLLVYPNVIAVERQLRVSPADFRLWVCLHEVTHRVQFSANPWLAQHMSQALGVLTSDAADDVTQVVGRLAEFAKKRRSGDLGPNDAGILGFMRAVQSEPQQVALDQLLVLGTLLEGHADHVMDAVGPAVVPSVQTIRNRFDQRRQRKQPPLQRLLRALLGVDAKLSQYTRGKAFVDHVVDRVGMDRFNTVWTSAATLPLPDEIEDPQRWIDRVL
>NZ_CP032155.1|WP_149382546.1|5476334_5477717_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MRPTQWRRSTHVVLAVAVIALVAAVVAVAAVLTHGDTSSAQAPPGHALVTASSGVVPVSDSAPVPTAAGLTAALALPVADPNLGNVSGRVTDAQTGTQLWEYRADVPLLPASTNKTLTTGAALLALKRDERVTTTVVAADQTTQPGVVVLVGGGDPILSAAPAGQETWYRGAARISDLADQVRKSGITATAVQVDDSLYSGPDFAPGWDPADIDGGDIAPMQSVMIDAGRIQPTTVDSARSRTPALDAGRALATALGVDPAKVTMAPGPPTGRQLAAVQGAPLIERLRQMMNASDNVMAESIAREVARAGGRPMSFAGAVDAITTKLAGAGVDMTGATLFDSSGLSVLDRLTAKTLDEVVQAAAGPDQPDMRPLLDVLPIAGGSGTLSDRFLGGDSKGASAGWLRAKTGSLTAINSLAGVVTDAGGRVLTFAFISNDAGPMGRVALDALASVLRTCGCGS
>NZ_CP032155.1|WP_149382548.1|5477881_5478370_+|inorganic-diphosphatase
MEFDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPADYGFIEDTLGEDGDPLDALVLLPLSVFPGVLIEVRPVGMFKMVDEAGGDDKVLCVPAGDNRWDHIQDIGDVPKDELDSIQHFFTHYKDLEPGKFVKGSDWVGRAEAEAEVERSRERFAKEGH
>NZ_CP032155.1|WP_149382550.1|5478453_5478990_+|2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline-decarboxylase
MLLHQGIGLEAFNELPDSKAVHALYECCNSVTLARDLTRGRPYADRAELFRRADDLLFSLSESSIDDILQAYPHVGRRPGSTKSQAEQCSVWDSSPEVMAELNAAVAEYNAHFGFGFVMHIGGLPREVCAKSVIAAVHDRMHHDPETERKVVCNELARINRSRLERMLGPEGGYDNWG
>NZ_CP032155.1|WP_168214976.1|5478999_5479962_+|alpha/beta-hydrolase
MALPMDPEVLTLLQPLMDAAAAVEPPPIGDVATRRERAIPLFQTLGASRAPVDGVEVSRHTLPTTDGAELDLAWYFPTSGMPGSAVLYLHGGGMIYSLAETAPAYDTAMRGYVAATGAPMLLVDYRVAPEFPDPTPVEDCYAALCWLAEHAADLGVDPARIAVAGDSAGGGLAAGVSLLARDRGGPALAAQVLIYPMLDDRTTIPDPELDPELLTWNYDDNITGWGALLGDRAGGDDVSIYAAPARAQVLTGLPPTYLDVGDLDIFRDENIAYAARLSAAGVPTELHVHPGCPHAWEALAPTAPVSERAVADRIRRLRAV
>NZ_CP032155.1|WP_149382552.1|5480881_5481490_+|TetR-family-transcriptional-regulator
MTTRRTQAQRSAATQDALRAAARELWGERGYADVGTPEIAQRAGVTRGAMYHQYADKSALFLDVVEAVEADVMNRLAAAVLAQEPPTPAATLHAAVDAWLDISSEREIRQLILLDAPNVLGWNGFRDIAERYSLGMTEQLLQAAMDSGELASAPVRPLAHILIGALDAAALTIAHADDPQRTGTEVRSALHGIVNGMLAGRP
>NZ_CP032155.1|WP_149382554.1|5481520_5482213_+|hypothetical-protein
MLEAVDSLWHFWWLIFPLGGVIGGAVRSVAAANERRAERRMERYRLKQQAKIAVAEAAGRNRGTESAYRRELKRITAAHNRTDERWFSYETDVAKLLDFPMMTDMRDPLTVSFHKARQRAELLRPENIDDVIGDRDAQLEYRDAVGEYAAAFDVAEAEAIRRRRSDFSVDDQQRLSRAQHLLHLAEDTAATPQERRIAYDRARRELDGLIVLPAAAREAIERRVAGEIEA
>NZ_CP032155.1|WP_149383750.1|5482277_5483324_+|allantoicase
MGGGQDSTRTQSHFLSLPDLAARPAGGAVVWANDDLFAERENLINPRPAEFRPATFGHRGQIYDGWETRRRRGTKPGDCDTAIVRLATPAIVRGVVVDTAWFTGNYPPQVSVEAACVEGYPNVEDLVHHADWTTIVDRADVNGDTRNSFEVSSTRRWTHVRLSIYPDGGVARLRVHGEGLLDPRLVDRTPLDLAALESGGRVTACSNMFYSSPNNLLLPGTARTMGDGWETSRRRDDGNDWVQVRLAGQGVPGAVELDTSYFIGNAPGAARLMGRDGDGEWFELLENTALQPDTRHRFVLADPRPVTDARLDVHPDGGMARLRLFGRLTDEGLRRIRQRWITGSDDAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP032155_1	1.4\|293259\|18\|NZ_CP032155\|CRISPRCasFinder	293259-293276	18	NZ_CP032155.1	1193638-1193655	1	0.944

1. spacer 1.4|293259|18|NZ_CP032155|CRISPRCasFinder matches to position: 1193638-1193655, mismatch: 1, identity: 0.944

ccgctggcgccgccgctg	CRISPR spacer
ccgctggcgccgccgatg	Protospacer
*************** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693473	Marine virus AFVG_25M504, complete genome	42588-42618	2	0.935
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN694361	Marine virus AFVG_250M609, complete genome	711-741	2	0.935
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693473	Marine virus AFVG_25M504, complete genome	42586-42616	4	0.871
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693828	Marine virus AFVG_250M104, complete genome	34011-34041	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	4417-4447	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	15237-15267	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	5731-5761	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	21215-21245	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	4379-4409	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	19851-19881	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	5699-5729	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN694617	Marine virus AFVG_250M855, complete genome	927-957	5	0.839
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693058	Marine virus AFVG_25M517, complete genome	7694-7724	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693058	Marine virus AFVG_25M517, complete genome	7702-7732	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693828	Marine virus AFVG_250M104, complete genome	34013-34043	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN694280	Marine virus AFVG_250M397, complete genome	1616-1646	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	5059-5089	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	20535-20565	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_013857	Azospirillum sp. B510 plasmid pAB510c, complete sequence	387729-387759	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_MF978389	Escherichia coli strain GDT6F36 plasmid pHNGDF36-1, complete sequence	14303-14333	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1218787-1218817	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP034352	Streptomyces sp. W1SF4 plasmid p2, complete sequence	139637-139667	6	0.806
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	17002-17032	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	816351-816381	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN693841	Marine virus AFVG_250M1137, complete genome	44306-44336	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1196999-1197029	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP018732	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence	59603-59633	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP033323	Azospirillum brasilense strain Cd plasmid p5, complete sequence	263281-263311	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP016500	Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence	269859-269889	7	0.774
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	6656-6686	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	6408-6438	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	21894-21924	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_010373	Methylobacterium sp. 4-46 plasmid pM44601, complete sequence	40282-40312	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	6553-6583	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN694506	Marine virus AFVG_250M1048, complete genome	53976-54006	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	48101-48131	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_011960	Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence	100929-100959	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	32472-32502	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	57040-57070	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP054620	Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence	168180-168210	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MK882925	Dinoroseobacter phage vB_DshS-R4C, complete genome	21377-21407	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	38597-38627	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	144221-144251	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	32278-32308	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NC_009040	Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence	115529-115559	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	32260-32290	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	301354-301384	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	76067-76097	8	0.742
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1509737-1509767	9	0.71
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP038146	Streptomyces sp. S501 plasmid unnamed, complete sequence	23142-23172	9	0.71
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	701122-701152	10	0.677
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	MN694093	Marine virus AFVG_250M872, complete genome	3223-3253	11	0.645
NZ_CP032155_10	10.1\|5301371\|31\|NZ_CP032155\|CRISPRCasFinder	5301371-5301401	31	NZ_CP016500	Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence	269861-269891	11	0.645

1. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693473 (Marine virus AFVG_25M504, complete genome) position: , mismatch: 2, identity: 0.935

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ccgccccccccgccccccccccccccccccc	Protospacer
********* ********* ***********

2. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN694361 (Marine virus AFVG_250M609, complete genome) position: , mismatch: 2, identity: 0.935

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cccccccccgcgccccccccccccccccccc	Protospacer
** **************** ***********

3. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693473 (Marine virus AFVG_25M504, complete genome) position: , mismatch: 4, identity: 0.871

ccgccccccgcgcccccccgccccccccccc--	CRISPR spacer
--gccccccccgccccccccccccccccccccc	Protospacer
  ******* ********* ***********

4. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693828 (Marine virus AFVG_250M104, complete genome) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
aaaccccccgccccccccccccccccccccc	Protospacer
  .******** ******* ***********

5. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gtcccccccccccccccccgccccccccccc	Protospacer
 . ****** * *******************

6. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gtcccccccccgcccccccgcccgccccccc	Protospacer
 . ****** ************* *******

7. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gctgcccccgcgcccccccccccccgccccc	Protospacer
 *  *************** ***** *****

8. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gctgcccccgcgcccccccccccccgccccc	Protospacer
 *  *************** ***** *****

9. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cccgctgccgcgccccccccccccccccccc	Protospacer
**  *. ************ ***********

10. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cccgctgccgcgccccccccccccccccccc	Protospacer
**  *. ************ ***********

11. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ccctcgcccccgcccccccgccccccgcccc	Protospacer
** .* *** **************** ****

12. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN694617 (Marine virus AFVG_250M855, complete genome) position: , mismatch: 5, identity: 0.839

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cccgcccccgcgccccctcccccccccccca	Protospacer
**  *************.* **********

13. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693058 (Marine virus AFVG_25M517, complete genome) position: , mismatch: 6, identity: 0.806

-ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gccgcccccc-cgcccccccggcccccctttg	Protospacer
 ********* ********** ******...

14. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693058 (Marine virus AFVG_25M517, complete genome) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cccgccccgccgcccccccgcccccccggcc	Protospacer
**  ****  *****************  **

15. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693828 (Marine virus AFVG_250M104, complete genome) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
caaaaccccccgccccccccccccccccccc	Protospacer
* .  **** ********* ***********

16. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN694280 (Marine virus AFVG_250M397, complete genome) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc--	CRISPR spacer
--gtcgcccccgccccccccccccccccccccc	Protospacer
  *.* *** ********* ***********

17. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcctcccccgcgcccccccgccccgcgcccg	Protospacer
 * .******************** * ***

18. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cgcctccccgcgcccccccgccccgcgcccg	Protospacer
*  *.******************* * ***

19. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccccgcgcgcccccccgccccaaccgtc	Protospacer
 ****** ****************  ** .*

20. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_MF978389 (Escherichia coli strain GDT6F36 plasmid pHNGDF36-1, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
tagcggcccgccccccccccccccccccccc	Protospacer
. **  ***** ******* ***********

21. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgcccgccgcgccgccccgcccccgacctc	Protospacer
 ***** ******* **********  **.*

22. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP034352 (Streptomyces sp. W1SF4 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.806

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ccgccccccgcgcccccgagcccggccggcc	Protospacer
*****************  ****  **  **

23. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.774

-ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ggcgccccct-cgcccccccgccgcccctcgg	Protospacer
  *******. ************ ****.*

24. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.774

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
tcgggttccgccccccccccccccccccccc	Protospacer
.**  ..**** ******* ***********

25. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN693841 (Marine virus AFVG_250M1137, complete genome) position: , mismatch: 7, identity: 0.774

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
tcttttcccgccccccccccccccccccccc	Protospacer
.* ...***** ******* ***********

26. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 7, identity: 0.774

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cgcccccccgcgcacccccgccgccccggcg	Protospacer
*  ********** ******** ****  *

27. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP018732 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.1, complete sequence) position: , mismatch: 7, identity: 0.774

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
acaccggtagcgccccccccccccccccccc	Protospacer
 *.**  . ********** ***********

28. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP033323 (Azospirillum brasilense strain Cd plasmid p5, complete sequence) position: , mismatch: 7, identity: 0.774

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gtgcggaccgccccccccccccccccccccc	Protospacer
 .**   **** ******* ***********

29. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP016500 (Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence) position: , mismatch: 7, identity: 0.774

---ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
agttcgcccc---cgcccccccccccccccccaa	Protospacer
   .******   ********* *********

30. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc--	CRISPR spacer
--ggcgccccctcccccccccgcccccccccgt	Protospacer
  * * *** * ******* * *********

31. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcctgctccgcggccccccgcccgcccccct	Protospacer
 * . *.***** ********** ******.

32. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcctgctccgcggccccccgcccgcccccct	Protospacer
 * . *.***** ********** ******.

33. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_010373 (Methylobacterium sp. 4-46 plasmid pM44601, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ttgatcttcgccccccccccccccccccccc	Protospacer
..* .*..*** ******* ***********

34. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cgaaactgcgagccccccccccccccccccc	Protospacer
* .  *. ** ******** ***********

35. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN694506 (Marine virus AFVG_250M1048, complete genome) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cacccccccgggccccccccccccccggggc	Protospacer
*  ******* ******** ******    *

36. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

37. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_011960 (Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

38. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

39. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

40. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP054620 (Azospirillum oryzae strain KACC 14407 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
ttgccccccgcggccccccgctcccggccgg	Protospacer
..********** ********.***  **

41. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MK882925 (Dinoroseobacter phage vB_DshS-R4C, complete genome) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
tcatttctcgccccccccccccccccccccc	Protospacer
.*....*.*** ******* ***********

42. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

43. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
cgctcccccgcgctcccccgcccctccggca	Protospacer
*  .*********.**********.**  *

44. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

45. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NC_009040 (Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

46. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

47. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc--	CRISPR spacer
--atcccgtgcgctccccccccccccccccccc	Protospacer
  ..*** .****.***** ***********

48. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 8, identity: 0.742

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gcgccctccgcgccccctcgcccctgccggg	Protospacer
 *****.**********.******. **

49. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 9, identity: 0.71

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
atagacgacgcgctccccccccccccccccc	Protospacer
 ..  *  *****.***** ***********

50. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gtatcccccgcgccaccccgccaccccggcg	Protospacer
 ...********** ******* ****  *

51. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.677

ccgccccccgcgcccccccgccccccccccc	CRISPR spacer
gagccccccgctcgcccccgcccccgtgggg	Protospacer
  ********* * *********** .

52. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to MN694093 (Marine virus AFVG_250M872, complete genome) position: , mismatch: 11, identity: 0.645

ccgccccccgcgcccccccgccccccccccc--------	CRISPR spacer
--------cccgcccccgcggccccccccccccccgggg	Protospacer
        * ******* ** **********

53. spacer 10.1|5301371|31|NZ_CP032155|CRISPRCasFinder matches to NZ_CP016500 (Agrobacterium sp. RAC06 plasmid pBSY240_1, complete sequence) position: , mismatch: 11, identity: 0.645

ccgccccccgcgcccccccgccccccccccc------	CRISPR spacer
------ttcgcccccgcccccccccccccccccaata	Protospacer
      ..*** *** *** ***********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1350414 : 1378849

Staphylococcus_prophage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149383373.1\|1350414_1351440_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	3.1e-31	31.7
WP_149378328.1\|1352184_1353282_+	diguanylate cyclase	NA	NA	NA	NA
WP_149378329.1\|1353533_1353833_-	hypothetical protein	NA	NA	NA	NA
WP_149378330.1\|1353829_1354327_-	hypothetical protein	NA	NA	NA	NA
WP_149378331.1\|1354818_1356012_-	ATP-binding protein	NA	NA	NA	NA
WP_149383374.1\|1356369_1356969_+	hypothetical protein	NA	NA	NA	NA
WP_149378332.1\|1356965_1358945_+	hypothetical protein	NA	NA	NA	NA
WP_149378333.1\|1358987_1361042_+	hypothetical protein	NA	NA	NA	NA
WP_149383375.1\|1361296_1361929_+\|transposase	TnsA-like heteromeric transposase endonuclease subunit	NA	NA	NA	NA
WP_168214792.1\|1365128_1366793_+	TniQ family protein	NA	NA	NA	NA
WP_149378335.1\|1367143_1367809_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_149378336.1\|1368254_1369649_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	7.7e-33	35.1
WP_149378337.1\|1370790_1371927_+	TniQ family protein	NA	NA	NA	NA
WP_149378338.1\|1372298_1373354_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_149378340.1\|1375691_1377047_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.9e-34	26.4
WP_149383376.1\|1377790_1378849_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

4207839 : 4216554

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149380530.1\|4207839_4210008_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.2e-207	51.0
WP_149380531.1\|4209974_4210457_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A217ER62	Bacillus_phage	1.6e-06	28.7
WP_102808938.1\|4210485_4210725_-	redoxin NrdH	V5UN81	Mycobacterium_phage	1.7e-20	62.7
WP_149380532.1\|4211172_4211715_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	2.3e-09	35.7
WP_149380533.1\|4211802_4212405_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_149380534.1\|4212401_4213454_+	DNA polymerase IV	I6RSM4	Salmonella_phage	3.0e-13	26.1
WP_149380535.1\|4213495_4214335_-	NmrA family NAD(P)-binding protein	NA	NA	NA	NA
WP_149380536.1\|4214331_4214757_-	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_149380537.1\|4214854_4215484_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_149380538.1\|4215693_4216554_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.9e-06	34.4

DBSCAN-SWA_3

5466325 : 5523698

uncultured_Mediterranean_phage(25.0%)

transposase,holin,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149382532.1\|5466325_5468656_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5ESM9	Bathycoccus_sp._RCC1105_virus	1.0e-106	41.7
WP_168214974.1\|5468830_5469730_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_149382534.1\|5469726_5470908_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_149382536.1\|5470949_5471723_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_149382538.1\|5471759_5472479_+	SIMPL domain-containing protein	NA	NA	NA	NA
WP_149381284.1\|5472475_5473465_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_168214975.1\|5473730_5474342_-	hypoxanthine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	1.7e-08	27.3
WP_149382542.1\|5474338_5475313_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_168215117.1\|5475291_5476347_-\|protease	zinc-dependent metalloprotease	NA	NA	NA	NA
WP_149382546.1\|5476334_5477717_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA
WP_149382548.1\|5477881_5478370_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	2.3e-32	48.4
WP_149382550.1\|5478453_5478990_+	2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase	NA	NA	NA	NA
WP_168214976.1\|5478999_5479962_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_149382552.1\|5480881_5481490_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_149382554.1\|5481520_5482213_+	hypothetical protein	NA	NA	NA	NA
WP_149383750.1\|5482277_5483324_+	allantoicase	NA	NA	NA	NA
WP_149382556.1\|5483320_5484238_+	allantoinase PuuE	NA	NA	NA	NA
WP_149382558.1\|5484207_5484936_-	Asp/Glu racemase	NA	NA	NA	NA
WP_149382560.1\|5484932_5486483_-	NCS1 family nucleobase:cation symporter-1	NA	NA	NA	NA
WP_149382563.1\|5486536_5487256_-	FCD domain-containing protein	NA	NA	NA	NA
WP_149382565.1\|5487310_5487682_-	STAS/SEC14 domain-containing protein	NA	NA	NA	NA
WP_149382567.1\|5487707_5488118_-	hypothetical protein	NA	NA	NA	NA
WP_149382569.1\|5488199_5489168_-	TerC/Alx family metal homeostasis membrane protein	I7HPH5	Enterobacteria_phage	1.0e-36	33.0
WP_149382571.1\|5489378_5493314_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	1.8e-39	25.5
WP_149382573.1\|5493310_5494648_+	M1 family metallopeptidase	NA	NA	NA	NA
WP_149383751.1\|5494674_5495931_+	hypothetical protein	NA	NA	NA	NA
WP_149383752.1\|5495956_5496658_+	glycosyltransferase	NA	NA	NA	NA
WP_149382574.1\|5496654_5496993_+	DUF2304 family protein	NA	NA	NA	NA
WP_149382576.1\|5496989_5497922_-	NAD-dependent epimerase/dehydratase family protein	L7RCI0	Acanthamoeba_polyphaga_moumouvirus	3.1e-38	32.6
WP_149382578.1\|5497960_5499751_+	hypothetical protein	NA	NA	NA	NA
WP_149382580.1\|5500484_5501699_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_149382582.1\|5501792_5503394_+	HAMP domain-containing protein	A0A1B1IWY2	uncultured_Mediterranean_phage	4.7e-18	30.2
WP_149382584.1\|5503390_5506195_-	type I DNA topoisomerase	A0A2K9L5F8	Tupanvirus	2.8e-98	31.0
WP_149382586.1\|5506308_5506887_-	hypothetical protein	NA	NA	NA	NA
WP_005138711.1\|5507043_5507247_-	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	3.4e-14	54.7
WP_149382588.1\|5507536_5509864_+	DUF1998 domain-containing protein	A0A1B1IUF6	uncultured_Mediterranean_phage	1.6e-06	27.3
WP_149382590.1\|5510173_5511199_+	DUF5593 domain-containg protein	NA	NA	NA	NA
WP_149382592.1\|5511217_5511586_-	flp pilus-assembly TadE/G-like family protein	NA	NA	NA	NA
WP_149382594.1\|5511554_5511845_-	pilus biosynthesis protein TadE	NA	NA	NA	NA
WP_149383753.1\|5511880_5512048_-	DUF4244 domain-containing protein	NA	NA	NA	NA
WP_149383754.1\|5512106_5512661_-	type II secretion system F family protein	NA	NA	NA	NA
WP_149383755.1\|5512672_5513443_-	hypothetical protein	NA	NA	NA	NA
WP_149382596.1\|5513448_5514612_-	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA
WP_149382598.1\|5514608_5515676_-	helicase	NA	NA	NA	NA
WP_149383756.1\|5516125_5516950_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_149382600.1\|5517322_5518069_-	oxidoreductase	NA	NA	NA	NA
WP_149382602.1\|5518182_5520156_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	2.7e-84	39.6
WP_149383757.1\|5520157_5520823_-\|protease	serine protease	NA	NA	NA	NA
WP_149382604.1\|5521037_5521550_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_149383758.1\|5521549_5522518_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_149382606.1\|5522510_5523698_-\|protease	acid resistance serine protease MarP	A0A1B1IRH0	uncultured_Mediterranean_phage	9.9e-05	25.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP032156

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

52163 : 115428

Gordonia_phage(14.29%)

transposase,integrase

attL 99664:99679|attR 121941:121956

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149382636.1\|52163_53231_+\|integrase	tyrosine-type recombinase/integrase	A0A142KCU7	Gordonia_phage	3.1e-05	26.0
WP_067393169.1\|53227_53542_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_149382634.1\|53567_55208_+\|integrase	integrase	NA	NA	NA	NA
WP_149383877.1\|55936_57298_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	U5N3F9	Enterobacteria_phage	5.6e-20	25.3
WP_149383990.1\|59054_60572_+	isoprene monooxygenase oxygenase subunit alpha	NA	NA	NA	NA
WP_149383878.1\|60617_60896_+	toluene monooxygenase	NA	NA	NA	NA
WP_149383879.1\|60888_61230_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_149383880.1\|61245_61572_+	monooxygenase	NA	NA	NA	NA
WP_149383881.1\|61575_62598_+	toluene hydroxylase	NA	NA	NA	NA
WP_149383882.1\|62612_63635_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_149383883.1\|63668_65009_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_149383884.1\|65124_66762_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_149383885.1\|66797_67250_+	hypothetical protein	NA	NA	NA	NA
WP_149383886.1\|67309_68764_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_149383887.1\|69000_69912_+	alpha/beta fold hydrolase	R9RXH6	Mycobacterium_phage	2.0e-05	27.8
WP_149383888.1\|71681_72710_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_149383889.1\|72709_73045_-	monooxygenase	NA	NA	NA	NA
WP_149383890.1\|73054_74155_-	monooxygenase	NA	NA	NA	NA
WP_149383891.1\|74154_75696_-	monooxygenase	NA	NA	NA	NA
WP_149383992.1\|75954_76530_+	response regulator	NA	NA	NA	NA
WP_149383991.1\|76501_77608_-	GAF domain-containing protein	NA	NA	NA	NA
WP_149383892.1\|79167_80037_+	ABC transporter permease	NA	NA	NA	NA
WP_149383893.1\|80041_81259_+	MCE family protein	NA	NA	NA	NA
WP_149383894.1\|81255_82296_+	MCE family protein	NA	NA	NA	NA
WP_149383895.1\|82292_83735_+	MCE family protein	NA	NA	NA	NA
WP_149383896.1\|83731_85351_+	MCE family protein	NA	NA	NA	NA
WP_149383993.1\|85395_86550_+	MCE family protein	NA	NA	NA	NA
WP_149383897.1\|86553_88095_+	MCE family protein	NA	NA	NA	NA
WP_149383994.1\|88145_88613_+	Mce protein	NA	NA	NA	NA
WP_149383898.1\|89594_90179_+	mammalian cell entry protein	NA	NA	NA	NA
WP_149383899.1\|90145_90778_+	mammalian cell entry protein	NA	NA	NA	NA
WP_149383900.1\|90801_92376_+	hypothetical protein	NA	NA	NA	NA
WP_149383995.1\|92435_93194_+	evbL	NA	NA	NA	NA
WP_149383901.1\|93615_93813_+	hypothetical protein	NA	NA	NA	NA
WP_149383902.1\|93820_95224_-	recombinase XerD	NA	NA	NA	NA
WP_149383903.1\|95300_95648_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_149383996.1\|95644_96784_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	5.0e-06	24.6
WP_149383904.1\|97367_97907_+	hypothetical protein	NA	NA	NA	NA
WP_149383997.1\|97989_98673_+	hypothetical protein	NA	NA	NA	NA
99664:99679	attL	NA	NA	NA	NA
WP_149383906.1\|100044_100533_+	hypothetical protein	NA	NA	NA	NA
WP_149383907.1\|100574_100871_+	hypothetical protein	NA	NA	NA	NA
WP_149383908.1\|100995_101229_+	hypothetical protein	NA	NA	NA	NA
WP_149383909.1\|102914_104939_-	hypothetical protein	NA	NA	NA	NA
WP_149383910.1\|105099_105591_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_149383911.1\|105642_106614_-	DUF4226 domain-containing protein	NA	NA	NA	NA
WP_149383912.1\|106742_108371_+	protein kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	8.5e-15	28.3
WP_149383913.1\|108417_108714_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_149383914.1\|108710_108962_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_149383915.1\|109462_110398_+	hypothetical protein	NA	NA	NA	NA
WP_168215133.1\|110472_110619_+	hypothetical protein	NA	NA	NA	NA
WP_149383916.1\|110942_111917_-	hypothetical protein	A0A1P8D5M4	Corynebacterium_phage	8.1e-21	29.2
WP_149383917.1\|112171_113149_-\|transposase	IS481 family transposase	A0A0M3LS26	Mannheimia_phage	2.4e-09	32.4
WP_014805453.1\|113988_115428_+\|integrase	site-specific integrase	NA	NA	NA	NA
121941:121956	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP032155

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP032156

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection