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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040392 Kosakonia radicincitans strain DSM 107547 chromosome, complete genome 1 crisprs cas3,csa3,DEDDh,WYL,DinG,RT 0 0 8 0
NZ_CP040393 Kosakonia radicincitans strain DSM 107547 plasmid pKrDSM107547, complete sequence 0 crisprs NA 0 0 8 0

Results visualization

1. NZ_CP040392
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040392_1 757184-757344 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1357662 : 1424340 70 Escherichia_phage(24.39%) plate,tail,lysis,tRNA,holin,integrase attL 1369110:1369127|attR 1411229:1411246
DBSCAN-SWA_2 1608971 : 1675771 56 Tetraselmis_virus(20.0%) plate,holin NA
DBSCAN-SWA_3 2005751 : 2015089 9 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_4 2095604 : 2170425 67 Escherichia_phage(18.75%) transposase,tRNA,tail,integrase attL 2141520:2141579|attR 2172026:2172394
DBSCAN-SWA_5 2398895 : 2465837 52 Tupanvirus(25.0%) plate,protease NA
DBSCAN-SWA_6 4070053 : 4078184 11 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_7 4142838 : 4215831 78 Enterobacteria_phage(32.56%) plate,tail,protease,portal,tRNA,terminase,integrase,capsid,head attL 4178355:4178374|attR 4211799:4211818
DBSCAN-SWA_8 5489985 : 5585109 93 Escherichia_phage(42.86%) plate,tRNA,protease,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP040393
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 11972 10 Macacine_betaherpesvirus(50.0%) integrase,transposase attL 67:80|attR 4557:4570
DBSCAN-SWA_2 17115 : 17769 1 Faecalibacterium_phage(100.0%) NA NA
DBSCAN-SWA_3 26227 : 32534 5 uncultured_Caudovirales_phage(50.0%) transposase NA
DBSCAN-SWA_4 38233 : 39055 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_5 45561 : 46428 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_6 53870 : 54218 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_7 83891 : 86252 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_8 94364 : 116374 18 Escherichia_phage(22.22%) integrase,transposase attL 97184:97198|attR 117027:117041
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage