CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043500	Xanthomonas translucens pv. undulosa strain P3 chromosome, complete genome	5 crisprs	DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL,DEDDh,csa3,Cas9_archaeal	9	25	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043500_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043500_1

526229-529221

TypeI

I-C

Consensus_repeat	Method
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CRISPRCasFinder
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CRT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	PILER-CR

45 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP043500_1

>merge|NZ_CP043500|1|526229-529221|CRISPRCasFinder,CRT,PILER-CR
TTTCCGATCCACGCGGCCGTGAGCGCGCGACGACACCGGCAAGAACATGTTCTTCGAACAAATACATGTTTCAACCCGCGCGACCGTGAGGACGCGACCGGCTCTCGAGCGCATCGTTCGGCTCCTGGGTCGAGTTTCAATCCACGCGCCCGTGAGGACGCGACTTTATTTGGCAGGCCAACCAGTCAACCTACGGTTGTTCAATCCACGCGCCCCTGAGGACGCGACGCCTCATGCGAGTGTGGTGCTTCTCGCTGTTCCAGTTTCAATCCACGCGCCCGTGAGGACGCGACCGGCGTGGAATTTCCGAGGTTCCGGCAGGCGTACGTTTCAATCCACGCGCCCGTGAGGACGCGACTCACCACGTCGTAGCCCCAAGTGCGCCCATCCGGGTTTCAATCCACGCGCCCGTGAGGACGCGACGCCCCATGCCGGCGATATTCAGCACCTTGTTGTAGTTTCAATCCACGCGCCCGTGAGGACGCGACGACAGCCGCGCCGAAGCAATCTGGCGGCTATCCAAGTTTCAATCCACGCGCCCGTGAGGACGCGACCTCTTCCAGCACCACGCCCGGGTTGTTGTCCAGGAAGTTTCAATCCACGCGCCCGTGAGGACGCGACGGGCGGCGGTTGTTGCACGCCACAGCGAGTTCAATGTTTCAATCCACGCGCCCGTGAGGACGCGACCGGCGGCGGTTCGACGCGGCAGTCCGCCAGGCCAAGTTTCAATCCACGCGCCCGTGAGGACGCGACATGATTTCGCACACTTCCCGCACGTCATCCCCTGGTTTCAATCCACGCGCCCGTGAGGACGCGACCTGCGGCACGCCTAAAGCCGAGGCCACCTGGGACTTGTTTCAATCCACGCGCCCGTGAGGACGCGACGATGTCTAAGTGGAAGCTGTCGCCCTGTGCAAAAGTTTCAATCCACGCGCCCGTGAGGACGCGACTTCTGCCGGCGCCGCGCTGACTTGTGTGGTATTACGTTTCAATCCACGCGCCCGTGAGGACGCGACGGGCAAGCAAGACGAAAATGTCCACGGTCAAGGAGTTTCAATCCACGCGCCCGTGAGGACGCGACCAGTTGTCATCGGCTCGCCGGCTTTGCCGTGGTGTTTCAATCCACGCGCCCGTGAGGACGCGACGTCCAGTATCTTGAGGATGGTCCCCTGCGTGTCCGTTTCAATCCACGCGCCCGTGAGGACGCGACCGCTGATGGACTTACAGCAGCGTGCAAGCACGGCAGTTTCAATCCACGCGCCCGTGAGGACGCGACGCCCGCCGCTTTCAGTGCACCGTGGAAGCCATCGAGTTTCAATCCACGCGCCCGTGAGGACGCGACCTCGAATCCTCATCTTCGGGGGTCATGTGGAAATTGTTTCAATCCACGCGCCCGTGAGGACGCGACTTTTGAGATGACCACATCGCTCATGATGTGGGATGTTTCAATCCACGCGCCCGTGAGGACGCGACCCGTTGCGCGTCCCTTTGCGGTCGCCCTCGACATGGTTTCAATCCACGCGCCCGTGAGGACGCGACGACTCGGCGCCGGCGCCTTGTCCTGACCCTTGGCGGGTTTCAATCCACGCGTCCGTGAGGACGCGACCCTACGCCGGAGGCATGTCGGTGCTCTACGCCTACGGGTTTCAATCCACGCGCCCGTGAGGACGCGACTCCTCGACCGGGGCCACATCCAGCATCGCCAACCAGTTTCAATCCACGCGCCCGTGAGGACGCGACTGGCATCGGCCACCGCAAAGAAATCGCCGTGCGAGTTTCAATCCACGCGCCCGTGAGGACGCGACACCATAACCGACACGTCAATCCCACACCGGTGTGAGTTTCAATCCACGCGCCCGTGAGGACGCGACCTGGGCCCGACGGGCTTGGTCGTCGAATACGCCGAGTTTCAATCCACGCGCCCGTGAGGACGCGACGGCCGAGGACGGCTGCGCGCCGCTGCGGTACGCCGCGTTTCAATCCACGCGCCCGTGAGGACGCGACTACGGCGACTGGTCGCCGAACGGCATGTCCTCGGCGTTTCAATCCACGCGCCCGTGAGGACGCGACTCGGACACGATCAAGCAATTCTCGATCACGTACCTGTTTCAATCCACGCGCCCGTGAGGACGCGACACAAGGCCAACTCGCACAGACGCAGGCGTTTCTGTTGTTTCAATCCACGCGCCCGTGAGGACGCGACTTGCAGCCACGAATCCATGGGGGATTCCGTACTTTTCGTTTCAATCCACGCGCCCGTGAGGACGCGACCCTGGCTGTGCCAGGCATGCCACAAGCGAGCGCATGTTTCAATCCACGCGCCCGTGAGGACGCGACCGCGCACGACAGACCGCCGCGACAAGGATCAACAGTTTCAATCCACGCGCCCGTGAGGACGCGACCTCAGGATGCAATTGCGTACGCCGGAGATTTCGGGTCGTTTCAATCCACGCGCCCGTGAGGACGCGACGCACGTGCTGGTTCCGTCGTACTTCGGGTCGTGCAGTTTCAATCCACGCGCCCGTGAGGACGCGACTTTCCGGAGGCGGTGCCGGTGATTGTTGATGACCTGTTTCAATCCACGCGCCCGTGAGGACGCGACCGCGGATAAACTCGCCGCGCATGTCCGGCAGATTGTTTCAATCCACGCGCCCGTGAGGACGCGACCCCGGTAATCGTGAGCCGCTTGGAAGTGGTGCCCGTTTCAATCCACGCGCCCGTGAGGACGCGACTCCACAACCCCGGCCAGTTCAAGAGCAATTACGAGTTTCAATCCACGCGCCCGTGAGGACGCGACAACCGGTGTCGAATGGGCGCGCGTGCCTCAGCAGTTTCAATCCACGCGCCCGTGAGGACGCGACGCTCAGAGCAATTCCGTGCAGGAAACATCGGAAGAGGTTTCAATCCACGCGCCCGTGAGGACGCGACGCACATCGGTGCTGGCACCGGGGATGTTGATCTTGTTTCAATCCACGCGCCCGTGAGGACGCGAC

>NZ_CP043500|1|1|526229-529221|CRISPRCasFinder
TTTCCGATCCACGCGGCCGTGAGCGCGCGAC	GACACCGGCAAGAACATGTTCTTCGAACAAATACAT
GTTTCAACCCGCGCGACCGTGAGGACGCGAC	CGGCTCTCGAGCGCATCGTTCGGCTCCTGGGTCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTATTTGGCAGGCCAACCAGTCAACCTACGGT
TGTTCAATCCACGCGCCCCTGAGGACGCGAC	GCCTCATGCGAGTGTGGTGCTTCTCGCTGTTCCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGTGGAATTTCCGAGGTTCCGGCAGGCGTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCACCACGTCGTAGCCCCAAGTGCGCCCATCCGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCCATGCCGGCGATATTCAGCACCTTGTTGTA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACAGCCGCGCCGAAGCAATCTGGCGGCTATCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCTTCCAGCACCACGCCCGGGTTGTTGTCCAGGAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCGGCGGTTGTTGCACGCCACAGCGAGTTCAAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGGCGGTTCGACGCGGCAGTCCGCCAGGCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ATGATTTCGCACACTTCCCGCACGTCATCCCCTG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGCGGCACGCCTAAAGCCGAGGCCACCTGGGACTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GATGTCTAAGTGGAAGCTGTCGCCCTGTGCAAAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTCTGCCGGCGCCGCGCTGACTTGTGTGGTATTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCAAGCAAGACGAAAATGTCCACGGTCAAGGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CAGTTGTCATCGGCTCGCCGGCTTTGCCGTGGT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GTCCAGTATCTTGAGGATGGTCCCCTGCGTGTCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCTGATGGACTTACAGCAGCGTGCAAGCACGGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCGCCGCTTTCAGTGCACCGTGGAAGCCATCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCGAATCCTCATCTTCGGGGGTCATGTGGAAATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTTGAGATGACCACATCGCTCATGATGTGGGAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCGTTGCGCGTCCCTTTGCGGTCGCCCTCGACATG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACTCGGCGCCGGCGCCTTGTCCTGACCCTTGGCGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCTACGCCGGAGGCATGTCGGTGCTCTACGCCTACGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCTCGACCGGGGCCACATCCAGCATCGCCAACCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TGGCATCGGCCACCGCAAAGAAATCGCCGTGCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACCATAACCGACACGTCAATCCCACACCGGTGTGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGGGCCCGACGGGCTTGGTCGTCGAATACGCCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGCCGAGGACGGCTGCGCGCCGCTGCGGTACGCCGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TACGGCGACTGGTCGCCGAACGGCATGTCCTCGGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCGGACACGATCAAGCAATTCTCGATCACGTACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACAAGGCCAACTCGCACAGACGCAGGCGTTTCTGTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTGCAGCCACGAATCCATGGGGGATTCCGTACTTTTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCTGGCTGTGCCAGGCATGCCACAAGCGAGCGCAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGCACGACAGACCGCCGCGACAAGGATCAACA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCAGGATGCAATTGCGTACGCCGGAGATTTCGGGTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACGTGCTGGTTCCGTCGTACTTCGGGTCGTGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTCCGGAGGCGGTGCCGGTGATTGTTGATGACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGGATAAACTCGCCGCGCATGTCCGGCAGATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCCGGTAATCGTGAGCCGCTTGGAAGTGGTGCCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCACAACCCCGGCCAGTTCAAGAGCAATTACGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	AACCGGTGTCGAATGGGCGCGCGTGCCTCAGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCTCAGAGCAATTCCGTGCAGGAAACATCGGAAGAG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACATCGGTGCTGGCACCGGGGATGTTGATCTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC

>NZ_CP043500|1|1|526229-529221|CRT
TTTCCGATCCACGCGGCCGTGAGCGCGCGAC	GACACCGGCAAGAACATGTTCTTCGAACAAATACAT
GTTTCAACCCGCGCGACCGTGAGGACGCGAC	CGGCTCTCGAGCGCATCGTTCGGCTCCTGGGTCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTATTTGGCAGGCCAACCAGTCAACCTACGGT
TGTTCAATCCACGCGCCCCTGAGGACGCGAC	GCCTCATGCGAGTGTGGTGCTTCTCGCTGTTCCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGTGGAATTTCCGAGGTTCCGGCAGGCGTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCACCACGTCGTAGCCCCAAGTGCGCCCATCCGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCCATGCCGGCGATATTCAGCACCTTGTTGTA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACAGCCGCGCCGAAGCAATCTGGCGGCTATCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCTTCCAGCACCACGCCCGGGTTGTTGTCCAGGAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCGGCGGTTGTTGCACGCCACAGCGAGTTCAAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGGCGGTTCGACGCGGCAGTCCGCCAGGCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ATGATTTCGCACACTTCCCGCACGTCATCCCCTG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGCGGCACGCCTAAAGCCGAGGCCACCTGGGACTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GATGTCTAAGTGGAAGCTGTCGCCCTGTGCAAAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTCTGCCGGCGCCGCGCTGACTTGTGTGGTATTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCAAGCAAGACGAAAATGTCCACGGTCAAGGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CAGTTGTCATCGGCTCGCCGGCTTTGCCGTGGT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GTCCAGTATCTTGAGGATGGTCCCCTGCGTGTCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCTGATGGACTTACAGCAGCGTGCAAGCACGGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCGCCGCTTTCAGTGCACCGTGGAAGCCATCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCGAATCCTCATCTTCGGGGGTCATGTGGAAATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTTGAGATGACCACATCGCTCATGATGTGGGAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCGTTGCGCGTCCCTTTGCGGTCGCCCTCGACATG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACTCGGCGCCGGCGCCTTGTCCTGACCCTTGGCGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCTACGCCGGAGGCATGTCGGTGCTCTACGCCTACGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCTCGACCGGGGCCACATCCAGCATCGCCAACCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TGGCATCGGCCACCGCAAAGAAATCGCCGTGCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACCATAACCGACACGTCAATCCCACACCGGTGTGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGGGCCCGACGGGCTTGGTCGTCGAATACGCCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGCCGAGGACGGCTGCGCGCCGCTGCGGTACGCCGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TACGGCGACTGGTCGCCGAACGGCATGTCCTCGGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCGGACACGATCAAGCAATTCTCGATCACGTACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACAAGGCCAACTCGCACAGACGCAGGCGTTTCTGTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTGCAGCCACGAATCCATGGGGGATTCCGTACTTTTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCTGGCTGTGCCAGGCATGCCACAAGCGAGCGCAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGCACGACAGACCGCCGCGACAAGGATCAACA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCAGGATGCAATTGCGTACGCCGGAGATTTCGGGTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACGTGCTGGTTCCGTCGTACTTCGGGTCGTGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTCCGGAGGCGGTGCCGGTGATTGTTGATGACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGGATAAACTCGCCGCGCATGTCCGGCAGATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCCGGTAATCGTGAGCCGCTTGGAAGTGGTGCCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCACAACCCCGGCCAGTTCAAGAGCAATTACGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	AACCGGTGTCGAATGGGCGCGCGTGCCTCAGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCTCAGAGCAATTCCGTGCAGGAAACATCGGAAGAG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACATCGGTGCTGGCACCGGGGATGTTGATCTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC

>NZ_CP043500|1|1|526362-529221|PILER-CR
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTATTTGGCAGGCCAACCAGTCAACCTACGGT
TGTTCAATCCACGCGCCCCTGAGGACGCGAC	GCCTCATGCGAGTGTGGTGCTTCTCGCTGTTCCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGTGGAATTTCCGAGGTTCCGGCAGGCGTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCACCACGTCGTAGCCCCAAGTGCGCCCATCCGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCCATGCCGGCGATATTCAGCACCTTGTTGTA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACAGCCGCGCCGAAGCAATCTGGCGGCTATCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCTTCCAGCACCACGCCCGGGTTGTTGTCCAGGAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCGGCGGTTGTTGCACGCCACAGCGAGTTCAAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGGCGGCGGTTCGACGCGGCAGTCCGCCAGGCCAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ATGATTTCGCACACTTCCCGCACGTCATCCCCTG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGCGGCACGCCTAAAGCCGAGGCCACCTGGGACTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GATGTCTAAGTGGAAGCTGTCGCCCTGTGCAAAA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTCTGCCGGCGCCGCGCTGACTTGTGTGGTATTAC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGGCAAGCAAGACGAAAATGTCCACGGTCAAGGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CAGTTGTCATCGGCTCGCCGGCTTTGCCGTGGT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GTCCAGTATCTTGAGGATGGTCCCCTGCGTGTCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCTGATGGACTTACAGCAGCGTGCAAGCACGGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCCCGCCGCTTTCAGTGCACCGTGGAAGCCATCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCGAATCCTCATCTTCGGGGGTCATGTGGAAATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTTGAGATGACCACATCGCTCATGATGTGGGAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCGTTGCGCGTCCCTTTGCGGTCGCCCTCGACATG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GACTCGGCGCCGGCGCCTTGTCCTGACCCTTGGCGG
GTTTCAATCCACGCGTCCGTGAGGACGCGAC	CCTACGCCGGAGGCATGTCGGTGCTCTACGCCTACGG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCTCGACCGGGGCCACATCCAGCATCGCCAACCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TGGCATCGGCCACCGCAAAGAAATCGCCGTGCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACCATAACCGACACGTCAATCCCACACCGGTGTGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTGGGCCCGACGGGCTTGGTCGTCGAATACGCCGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GGCCGAGGACGGCTGCGCGCCGCTGCGGTACGCCGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TACGGCGACTGGTCGCCGAACGGCATGTCCTCGGC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCGGACACGATCAAGCAATTCTCGATCACGTACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	ACAAGGCCAACTCGCACAGACGCAGGCGTTTCTGTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTGCAGCCACGAATCCATGGGGGATTCCGTACTTTTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCTGGCTGTGCCAGGCATGCCACAAGCGAGCGCAT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGCACGACAGACCGCCGCGACAAGGATCAACA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CTCAGGATGCAATTGCGTACGCCGGAGATTTCGGGTC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACGTGCTGGTTCCGTCGTACTTCGGGTCGTGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TTTCCGGAGGCGGTGCCGGTGATTGTTGATGACCT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CGCGGATAAACTCGCCGCGCATGTCCGGCAGATT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	CCCGGTAATCGTGAGCCGCTTGGAAGTGGTGCCC
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	TCCACAACCCCGGCCAGTTCAAGAGCAATTACGA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	AACCGGTGTCGAATGGGCGCGCGTGCCTCAGCA
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCTCAGAGCAATTCCGTGCAGGAAACATCGGAAGAG
GTTTCAATCCACGCGCCCGTGAGGACGCGAC	GCACATCGGTGCTGGCACCGGGGATGTTGATCTT
GTTTCAATCCACGCGCCCGTGAGGACGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043500.1\|WP_058364358.1\|524294_525113_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|236986
NZ_CP043500.1\|WP_003480726.1\|529717_530752_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP043500.1\|WP_003465407.1\|525570_526080_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226764
NZ_CP043500.1\|WP_058364365.1\|537810_540042_+\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|377178
NZ_CP043500.1\|WP_058364364.1\|534886_537181_-\|CRISPR-associated-endonuclease-Cas3''	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_CP043500.1\|WP_003465399.1\|509504_510047_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_058364361.1\|531409_532288_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP043500.1\|WP_003465397.1\|508528_509296_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319817
NZ_CP043500.1\|WP_058364360.1\|530754_531387_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP043500.1\|WP_058364359.1\|525218_525512_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
NZ_CP043500.1\|WP_058363093.1\|529411_529702_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP043500.1\|WP_003465400.1\|510460_511822_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319958
NZ_CP043500.1\|WP_038236357.1\|512021_514046_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003465426.1\|540132_541464_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP043500.1\|WP_003465402.1\|514758_517881_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP043500.1\|WP_003465404.1\|521494_522736_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|183194
NZ_CP043500.1\|WP_003465403.1\|518122_521344_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|182501
NZ_CP043500.1\|WP_058364362.1\|532284_534129_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09757_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP043500.1\|WP_058364363.1\|534125_534800_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP043500.1\|WP_058364366.1\|541438_543829_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657

Protein	Function_ID	Function_description	E-value
NZ_CP043500.1\|WP_058364358.1\|524294_525113_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|236986	PRK11792, queF, 7-cyano-7-deazaguanine reductase; Provisional.	3.49011e-161
NZ_CP043500.1\|WP_003480726.1\|529717_530752_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP043500.1\|WP_003465407.1\|525570_526080_+\|hypothetical-protein	gnl\|CDD\|226764	COG4314, NosL, Predicted lipoprotein involved in nitrous oxide reduction [Energy production and conversion].	0.00838512
NZ_CP043500.1\|WP_058364365.1\|537810_540042_+\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|377178	pfam03971, IDH, Monomeric isocitrate dehydrogenase. NADP(+)-dependent isocitrate dehydrogenase (ICD) is an important enzyme of the intermediary metabolism, as it controls the carbon flux within the citric acid cycle and supplies the cell with 2-oxoglutarate EC:1.1.1.42 and NADPH for biosynthetic purposes.	0
NZ_CP043500.1\|WP_058364364.1\|534886_537181_-\|CRISPR-associated-endonuclease-Cas3''	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.38981e-55
NZ_CP043500.1\|WP_058364361.1\|531409_532288_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	7.17882e-152
NZ_CP043500.1\|WP_003465397.1\|508528_509296_+\|HAD-family-hydrolase	gnl\|CDD\|319817	cd07515, HAD-like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.9189e-55
NZ_CP043500.1\|WP_058364360.1\|530754_531387_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.15885e-42
NZ_CP043500.1\|WP_058364359.1\|525218_525512_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	3.80631e-23
NZ_CP043500.1\|WP_058363093.1\|529411_529702_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.87769e-33
NZ_CP043500.1\|WP_003465400.1\|510460_511822_+\|VOC-family-protein	gnl\|CDD\|319958	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	0
NZ_CP043500.1\|WP_003465426.1\|540132_541464_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.07324e-64
NZ_CP043500.1\|WP_003465402.1\|514758_517881_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP043500.1\|WP_003465404.1\|521494_522736_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|183194	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit.	2.09865e-97
NZ_CP043500.1\|WP_003465403.1\|518122_521344_-\|MMPL-family-transporter	gnl\|CDD\|182501	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit.	0
NZ_CP043500.1\|WP_058364362.1\|532284_534129_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP043500.1\|WP_058364363.1\|534125_534800_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.35473e-120
NZ_CP043500.1\|WP_058364366.1\|541438_543829_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.45467e-61

>NZ_CP043500.1|WP_003465407.1|525570_526080_+|hypothetical-protein
MKIHSKTLTSPLLLALVGALALAGCKKQEQSQTATPDPTSSAPTEAMPGPAETAPAAATAGTVTVASVTVGNSAGADKTVAPLSTLSSKDTIIVSVKTEGSSTTTNVGAKLLFQDGQTAGEQSATLTTAGAETTNISFTNAKGWPAGKYKAEVTVNGQPAGTVQEFEVK
>NZ_CP043500.1|WP_058364359.1|525218_525512_+|LysM-peptidoglycan-binding-domain-containing-protein
MNSDKRADFSAVTAKVDTTADITPKADFSAVQAHVDTTAEQVQQVYVVKSGDSLSKIAKLHYGEGNAWTRIFEANRDVLDDPDNIYPGQTLKLPARA
>NZ_CP043500.1|WP_058364358.1|524294_525113_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MNTPQDSSLGREVAYPSQYDPALLFPIPRAGGRAEIGLETTPLPFFGLDRWHAYELGWLDAQGKPCVATATLQVPCTSPQLIESKSLKLYLNSLNAMRFNSAEAVRACIVSDLSARAGADVTMEFGLPPVDPLGEGDSLDVLDIAIDCYGPPRPQFLFAAADDIAEEALSSALLKSNCPVTGQPDWATLCVRYRGGRIDREGLLRYLISFREHAGFHEQCLEQIFHDLLIRCRPQSLQVEARYTRRGGLDINPWRATPDVAEPIAFHRDPRQ
>NZ_CP043500.1|WP_003465404.1|521494_522736_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRFWKIALLIVAAMVVVLVGAHFLRSGHGHGRGGAAAGGDGDDSTPIPVTVVAAGSQTVPIYATSTGTVTALATVTVNPQVSGQLMSLNFREGQEVKKGELLAQIDPRSLQASYDEAAASKRQNQALLATARSTFQRSDAPAYRQYVARTDLDTQRNQVAQYEAAVAANDAAMRAAQVQLQYTRILAPIDGITGLRGVDVGNIVSTSSSIVTITQIHPIYVVFNLAERELQGLREAQAAGPLTVAALDRTDAHVIAGDGRVDVIDNQISSDTGTFKVRAEFPNPGNALWPGQFVNVRLTLRTLASGVVVPTQAVQRGPDGDYVYAVQGDNTVKMQTVRQGVEVGDSQVQLEQGLKAGERVVTEGQFRLKPGSKVTPLKPGEAPPQPTEAELKAAESKQKRKDGGGRRDGGPR
>NZ_CP043500.1|WP_003465403.1|518122_521344_-|MMPL-family-transporter
MGFSTIFIRRPIATTLLMAGVLLLGILGYRQLPVSALPEIDAPSLVVTTQYPGANASTMASLVTTPLERQLGQISGLQMMTSDSSAGLSTIILQFAMDRDIDIAAQDVQGAIRQSTLPSSLPYQPVYNRVNPADAAILTLKLSSDTLPLRDVNNYADSILAQRLSQVPGVGLVSIAGNVRPAVRIQVNPAQLSNMGLTMEALRSALTETNVNAPKGSLNGKTQSYSIGTNDQLSSAADYRDTVISYRNGAPVRLSDVAQVVDGVENDQLAAWADGKPAVLLEIRRQPGANIVQTVEQIRAILPQLQGVLPRGVHLDVFSDRTETIRASVHEVKFTLILTIFLVVAVIFVFLRRLWATIIPSVAVPLSLAGTFAVMAFAGMSLDNLSLMALVVATGFVVDDAIVMIENIVRYIEQGKSGREAAEIGAKQIGFTVLSLTVSLVAVFLPLILMPGVTGRLFHEFAWVLSIAVVISMLVSLTLTPMMCAYLLKPDALPEGEDAHERAAAAGKTTVWTRTVALYERTLDWVLGHQPLTLAIALATMVLTVVLYVVIPKGLLPEQDTGLITGVVQADQNVAFPQMQQRTEAVAAALRKDPAVTGVAAFIGAGSMNPTLNQGQLSIVLKARADRDGLDEVLPRLQKAVAGLPGVALYLKPVQDVTLDTRVAATEYQYSLSDVDSAELATQGARLTEALRKRPELADVDNNLANQGRALELTVDRDKASALGVPMQTIDDTLYDAFGQRQISTIFTQLNQYRVVLEVAPQFRNSTALLHQLAVTSNGSGALTASNATSFGQTTSSNSSTATGIGNQNTGIAVGSGGTVPLAALAAAKVTTTPLVVSHQQQLPAVTVSFNLAPGYSLSQAVAAIEETREQLQLPPQLHAEFIGKAAEFTGSQADIVWLLLASVVLIYIVLGVLYESYIHPLTIISTLPPAGVGALLALMLCGLSLSVDGIVGIVLLIGIVKKNAIMMIDFAIDARREGANAHDAIRRACLLRFRPIMMTTAAAMLGALPLALGDGIGSELRRPLGIAIVGGLLLSQLVTLYTTPVIYLYMERASERLRAYRERRVAAAERLA
>NZ_CP043500.1|WP_003465402.1|514758_517881_-|efflux-RND-transporter-permease-subunit
MNLSSPFIRRPIGTTLLAIGLFVIGMMCYLRLGVAALPNISIPVIFVQASQAGADASTMASTVTAPLERHLGQIPGIDTMRSSSSEGNSQVFMMFQSDRNIDSAAQDVQTAINSAQADLPSGLSTPRYQKANPNDDPVIAIALTSQTQSADELYNVADSLLAQRLRQISGVASVDIGGASTPAVRVDVNLRALNAMGLTPDDLRNAVRAANVTSPTGFLSDGASTTAIVANDSVAKAADFGQVVISQQNGRTVRLRDVANVYDGQQDAYQAAWFGGKPAVVMYVFIRAGANIVETVDRVKAQIPMLRGYLQPGTRMSAYFDRTPTIRASLNEVQVTLLISLAMVVLTMALFLRRLAPTLIAAATVPLSLAGAALAMYVLGFTLNNLSLLALVIAIGFVVDDAIVVIENIMRHLDAGMSRLDAALAGAREIGFTIVSITASLVAVFIPILFASGMIGAFFREFTVTLVAAICVSAVVSLTLTPALCSRFLSAHAEPERPGRFGAWLERVHAGMLRVYTVALDFSLRHALLLALTPLLLIAATVFLAGAVKKGSFPAQDTGLIAGRASSSATVSFADMVNRQRRITDMLMSDPAVKIVGARLGSSRQGSSARFNIELKRRDEGRTETTAQVLARLSAKADRYPDLQLRLRAIQDLPSDGGGGTSQGAQYRVSLQGNDNAQLQQWLPKLQEALKRNPKLRDVGTDVDNAGLRQNIVINRAQAARLGVSIGAIDGALYGAFGQRQISTIYSDLNQYSVVVNALPEQTATPAALDRIYVPTRSGAMVPLTAVAHQVPGLAPPQITHQNQYTTMDLSYNLAPGVSTGEGDAIIAATVAGLRMPGDIRIADGGGFGVALQPNSMLILVLTAIVVVYIVLGMLYESLVHPVTILSTLPAAGMGALLALWVTDTELSVISMIALVLLIGIVKKNAIMMIDFALVAEREHGKSPLEAVREACVVRFRPIMMTTMVAILAAVPLAVGLGEGAELRRPLGIAMIGGLLISQSLTLLSTPALYVIFSCLRERWKARRRSSANGRAAPATLATR
>NZ_CP043500.1|WP_038236357.1|512021_514046_-|hypothetical-protein
MPGTDLLSVMTQLEVSNALSDEIAQKTKDLHKSKEKAAFFQEKILGPAQDTDSEKKLAPMDRLRFIDDAIQTARQGLDAFAYLNARGCLLKENSWKLELELLTLFGRAATVGYTTCDELLEEKWKRDLSAPTALLNRYAPDVRLIPKEAIARQQPEEWRGYLQKIDKYRATMDEFVNYVKAPGTLKKTRDKIEYMLQIFKTHLGSCYESMQAIRSMLTEIYTLKLEGQVESAETIGMHTLKPRMDELREANHYLGEAVPEAVQVLNHAILNHSIPLLIGAQVTPQVLAKHMAVMEDYAERHGRIGSKLCLDVAALIEEGKDEGTWRTMLDLAQALTEYRQCLLDLCRSARGGGRPAVPEPATALEEQPAPSAPGPSRKSRKSRGKRATGASSAVPASPAAPSDTRTLAQMQADTLLKSVALEPAMVNALGADFIQIAKRLGKDTGNVERMMRNADQSDQDAANAFDFVRASVQGWFGSSEQLRQAKARLPADDARIGPLSERLQLLELIEQRVRTREVDALKCDTQPRSVHLARLLAMNEITRVAAPMQLPSDADSGDRGTLFEVRIDHKPLSDGQRPAPWFVHLHTATPVAANALASLNYKTFAAVHLKTAKEKNLGKRWETLMRALGNTDAKVHRATIGSDVLGTLLQARPGDAAAPSSRRIGHRGHRSEHP
>NZ_CP043500.1|WP_003465400.1|510460_511822_+|VOC-family-protein
MTTAFVSPDAIRSLFAQAMSDMYRTEVPLYGTLMELVAQVNAATLAADPALDAQLQRNGERARLDQERHGAIRVGSAEELATLRRLFAVMGMHPVGYYDLSVAGVPVHSTAFRPLDAAALERNPFRVFTSLLRLELIEDPALRAQAAQILAQRRIFTEGALQLIERGERDGGLGEADAQRFVAEALETFRWHGDATVTLPTYRALSDAHKLIADVVSFHGPHINHLTPRTLDIDAAQAQMLQRGIDAKAVIEGPPPRRCPILLRQTSFKALEETVRFPAGAGAADAGTHTARFGEIEQRGLALTPKGRGLYDVLLERARAADGSAGGDYVARLQAAFVEFPDDYATLRREGLGYFRYVLTEAGRAAGAAALAGKPAEALIADGLASADPIVYEDFLPVSAAGIFQSNLGGGEQRAYAAQANRAAFEQALGAAVHDEFAIYADIERASLQALQN
>NZ_CP043500.1|WP_003465399.1|509504_510047_+|hypothetical-protein
MSLRLRSACLILPLALCLAGAALAQEAPAAGASAEAVVAAGSGDAWVDRQLLDIDRYAARYPDSFLDEVARYAQLPRGYAEALLRERRWPPRDIYFACFLAKAARLPYREVVRARTSAGPAASWAEVANALQVEPGSLPYRALRHAIVASYDHWDRPIVLDALLRRQLGDRAQRDPSAAQ
>NZ_CP043500.1|WP_003465397.1|508528_509296_+|HAD-family-hydrolase
MPTPIALRSSAIALVGFDGDDTLWKSEDYYRDAEAAFEAILGQYLDLRDAGTLQHLLAVERRNLKVFGYGAKGMTLSMIEAAIELTEARIAARDLQRIVEIGRATLQHPVEVIAGVREAVAAIAAEFEVVLITKGDLFHQEAKIAQSGLGALFPRIEIVSEKDPQTYAKVLAEFGVGAERFVMIGNSLRSDVEPVIALGGWGIYTPYATTWAHEAEHGLSADEPRLRQVATAADWPQAVAELNRHAASQGPALSA
>NZ_CP043500.1|WP_058363093.1|529411_529702_-|CRISPR-associated-endonuclease-Cas2
MMVLISYDVSTSSPGGEKRLRKVAKACRDLGQRVQFSVFEIEVDPAQWAALRQRLCDLIDPGVDSLRFYQLGAKWEARVEHVGAKPSLDLKGPLIF
>NZ_CP043500.1|WP_003480726.1|529717_530752_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRRQLNTLYATTDGAWLRKDGANIVMEVERQERARLPVHMLESLVCIGRVAVSPQLLGFCSEQGISICYLTPQGRFLARVEGPVSGNVLLRREQYRRSDDPARCAAVVRNLLAGKIHNQRAVLARGWRDHGDRLTDVSAFQHALKRLKRIPQRILGETSVDVLRGLEGEAAQSYFGVFDQLVRADAPVLRFGGRNRRPPRDAFNALLSFLYTLLTHDCRSALETVGLDPAVGFLHRDRPGRPSLALDLAEEFRPLLGERLALSLINRRQLNERDFQTFDSGAVLLKDDARKTVLVAYQERKREQLQHAFLGEKVDIGLLPFVQAQLLARHLRGDLDGYPPFFWK
>NZ_CP043500.1|WP_058364360.1|530754_531387_-|CRISPR-associated-protein-Cas4
MDDEDLIPLSALQHYLYCPRQCALIHVERQWAENRQTAEGRLLHQRADAPQTERRRGMRTVTAMPLLALELGITGKADVVEFHRDGDGEFAFPVEYKRGRPKAHRADEVQLCAQGLCLEHMLGHPVAAGALFYGQTRRRKDVAFDPALRELTHRTISETRAMLSSGTTPSARYEARRCDACSLIDLCQPRLLGRGSVEGWLRQQLEAEEE
>NZ_CP043500.1|WP_058364361.1|531409_532288_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSAIAHRYEFVYLFDVTNGNPNGDPDAGNLPRLDPETNRGLVTDVALKRKIRNYVALEKENTPGYAIYMQEKSVLNSQHELAWKALNIPPDEKEKYKKLPKDQAKAKELTFWMCTNFFDVRTFGAVMTTEVNTGQVRGPVQLAFASSVEPVLPLEVSITRVAVTNEKDLEKERTMGRKHILPYGLYRAHGFVSAKLAERTGFSEDDLQLLWRALTNLFEHDRSAARGEMAARKLLVFEHEHPMGNAPAHVLFDKVKVERVESADNGPARGFSDYRVLIDRDLPAGVTVTELI
>NZ_CP043500.1|WP_058364362.1|532284_534129_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILSALADYYQRLLDDPASGIAAPGYSQEKIGYAIVLTTDGSVVAVEDEHDYDGKKRIPKSVSVPASFKRPGIGTNPFFLWDKTSYALGASASSKRSEQEHAAFKALHQQALADSNDPGLLALLAFLDTWSPTQFPEHPHFARHGEALLDTNVVFRLDGDTGYLHHRAAARAAWERQQGQGANGAFGICLVSGERSPLARLHPAIKGVNGAQSSGASIVSFNLDAFTSYGKSQGENAPVSEQAAFAYTTALNHLLRRDPHNRQRLQIGDSTVVFWAQAKTTAQADGAEDLIADFLRGGEAGDPGIADGQATQRLQLALEQVRQARPLREVDATLDDEARIFVLGLAPNASRLSIRFWETQTLAGFARRLADHYHDLALQPPAWKRPPTPQFLALQTAPVYGEHGKPKAEDVSPLLAGELTRAILTGTRYPRSLLGAIVMRFRADGQVNPLRVALCRAVLAREARLDTQQGLSSTKGEPPVSLDTANTDPGYLLGRLFSSLENLQRAALGSQINATIRDRYYGAASATPASIFPVLLRSAQNHFGKLRKDKAGLAVNLEKEIGQIIDALPSSFPRTLPIEEQGRFAIGYYHQNQARFVRNDGKDAPDTASEGENA
>NZ_CP043500.1|WP_058364363.1|534125_534800_-|type-I-C-CRISPR-associated-protein-Cas5
MSYGIRLHIWGERALFTRPEMKVERVSYDIITPSAARGILEAIHWKPAIRWVVDSIQVLKPIRFESIRRNEVAGKLSAASVSKAIKAGRTDTLVSYVEEDRQQRAATILREVGYVIAAHFELTDKAGADDNVGKHLDIFNRRARRGQCFQTPCLGTREFPASFALIEDDAAVPATDPALAGERDLGWMLHDIDFTDGMTPRFFRARMVDGRVEVPAPEDGGVRA
>NZ_CP043500.1|WP_058364364.1|534886_537181_-|CRISPR-associated-endonuclease-Cas3''
MKFYAHSAKRQDRGDWQPLAEHLIQVGDFAAEHAAPFGGQILARAAGRLHDLGKYTEKFQARLDGDPARVDHATWGARIARERYSTTGALIAYGIAGHHAGLADGRAGHEAQSRPSLQERLSDDYRKHELPPLLPEWERELALPDKLALPAGFAGHSHLERRPFQLSLLARMLFSCLVDADFTDTDDFYRRLEGRPSRAEEAGTRPTLAQLRERLNTHMAGFPREGGINPLRTQILHEVRAKADMPPGLFSLTVPTGGGKTLASLAFALDHAIAHAQSHGLRRVIYVIPFTSIVEQTVQVFRHALGVQDRDDVVLEHHSAFFDDPSAAPQAIAKRRLAMENWDAPIVVTTAVQFFESLFADRPARCRKLHNIAGSVVVLDEAQTLPHNLLRPCVALLDELARNYRVSPVLCTATQPALRLEQGFKGGLEHVQELVDDPPALYAQLQRVRVRHVGMLDDDVLADHLRRREQVLCIVNNRRHARHLFDAIAGQPGVRHLTTLMHARHRSAVLAELREDLKAGRPCRLVATSLIEAGVDVDFPAVLRAEAGLDSIAQAAGRCNREGRRPLDASEVLVFAPANRDWAPPKELELFAEVFRGVERAHRNDLLAMEAVADYFGALYRRLGDGRLDREDLLGLLRNADIDGLPLDTLARKFKLIRTTMRPLIVPYAPGSDKEVPEVADTLRQLEHAEQVGVAGAARRLQPWLVQVPEQAYKALWQAYAIAPVAQARYGEQFVRLVNPRLYDARFGLHWDNPQFIAAEALVN
>NZ_CP043500.1|WP_058364365.1|537810_540042_+|NADP-dependent-isocitrate-dehydrogenase
MSNTPKILYTLTDEAPYLATQSLLPIVAAFAGTAGIAVETRDISLAGRLISQFPEYLREEQRIADDLAELGQLATTPEANIIKLPNISASVPQLKAAIKELQQQGYALPDYLDEPQDDTQKEAKARYDRVKGSAVNPVLREGNSDRRAPLSVKNYARKHPHRMGAWSADSKSHVAHMQDGDFYGSERSALIAQAGSVRIELVGKDGSVTVLKEKTAVQAGEIIDAAVMSKRALASFVQAQIADAKQQGVLFSLHLKATMMKVSDPIMFGVVVGAFYQDVLDKHADALKQVGFDPNNGIGDLYARIATLPEAQRAQIQADLQAVYAQRPALAMVNSDKGITNLHVPSDVIVDASMPAMIRDSGKMWNAEGKLQDTKALIPDRCYAGVYQAVIEDCKRHGAFDPATMGSVPNVGLMAQKAEEYGSHDKTFQIAAAGMVRVSDSDGKVLLEHAVEAGDIWRMCQVKDAPIQDWVKLAVSRARLSGTPAVFWLDPQRAHDALMIQKVERYLQDHDSTGLDIRILPPVAATAFSLQRIRKGEDTISVTGNVLRDYLTDLFPIMELGTSAKMLSVVPLMAGGGLFETGAGGSAPKHVQQFVEENYLRWDSLGEFLALAASLEHLGQRHRNATIGVLAKTLDQANGQFLDNDKSPSRKVGELDNRGSHFYLALYWAQALAAQDEDAALQARFAPLAKQLAEYEAAIVAELNGVQGKPVDIQGYYRPNLERVSQAMRPSATFNAALATLTA
>NZ_CP043500.1|WP_003465426.1|540132_541464_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MRNFDCASDRPDPRRRALLAAAPLLSMQDMLRQVGGSATQAAEMPAAPAGVPARQLASDEAYWAQVAAAYDVDRRTIALENGYWGALSQPVLQAYVQRVQQVNHDNAHYARLQFPDDYRALRARAAGVLGIDPRELALTRNATESLQLLIGGYNRLKPGDAVLYADLDYDAMITAMQWLRQRRGVEAIGIELPQPATRQNLIDAYAQALQRYPQVKMMLVTCISHRTGLVLPVAEIVAMARQRGVDCIVDATQAIGQRDLRLPELGADFVGFNFHKWIGAPLGVGGFHIRRERIGDIDPHMGQAGPADSIDTRVHTGTVDFAAFLTLPTALEAHERIGAANKQARLQYLRDRWVHAIADLPQLEVLTPDDPQLYGAMTSLRLRGQTSEQQNTALAQRLLQQFGVMTTVRSGAASGACVRATPALFTRPQEIDRFAQALRSIAG
>NZ_CP043500.1|WP_058364366.1|541438_543829_-|TonB-dependent-receptor
MNRIAHRRLATVVFTVCAGSSAAASATPPAQETDSTSTTLDSVVVTGTRGANRTQFGTLAPVDVISAEEIRAVGSSDLNTVLAALVPSFVVQRLPLADGQVFVRPATLRGLSPDQTLVLVNGHRFHRSALLGARGAQAPDLAQIPTNAIKRIEVLRDGAAAQYGSDAIAGVINIILDDRVGTELGVDVYRYSEGDGLARTYSLKRGWELGAGSLVAFAEHSASEPTDRGVQRADAIAFQAAHPAIAVADPVQRWGQPEQHSTHLGMNLDLPLSDSVGLYGYALFNDGGGVSDFNWRNPDSNASIYKTTAAFPGFDLRSVYPAGFTPRYGSDYRDAQTLAGLKGAFNERFSWDVSAAYGLSKIAYSLGDSINASLGPTSPTAFHLGSLQQREVNLNADFVYALPLAMLPDPLNIAFGAERRSETYAIAAGDPASYAIGAGARYGLAPNANGAPGFSPQQAGSWDQTSYAAYADVEVPLTARFSVGGALRYEDFSSFGSSLNGKLSARLELTQWLALRGAWSNGFRAPTPGQSYATQITQGLDTVSLQVFNSGRLSPQDPIAIALGAKPLKPEASDSLSLGLAWQAPSGLFGSLDLYRIALSDRFSTSQSFVVPATLPNPMHYTSVNYFTNDFGTTTEGADLVFGYQHTLGRGRVGATLAYNYNRTQVDNGSTAVAANPTQRILFEQQLPQHKGSLGLTWEQGPLQGLLRMRYYGAWTDSSGNATGDIFQRFGAISLLDLSATYALSQTLSLRLGADNVLNTYPDKATFQASRGLVYSRNAPYDADGRNLYAQLRLRF

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Crispr_ID: NZ_CP043500_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043500_2

800072-800174

Orphan

Consensus_repeat	Method
CAGTGACCGGCGCCGATGGCAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043500_2

>merge|NZ_CP043500|2|800072-800174|CRISPRCasFinder
CAGTGACCGGCGCCGATGGCAGACGCTTGCGCCTGCCGGCAGATGAAGCCTGGCGCAGTTCAAGTCGACCAAGACCACGGCAGTGACCGGCGCCGATGGCAGA

>NZ_CP043500|2|2|800072-800174|CRISPRCasFinder
CAGTGACCGGCGCCGATGGCAGA	CGCTTGCGCCTGCCGGCAGATGAAGCCTGGCGCAGTTCAAGTCGACCAAGACCACGG
CAGTGACCGGCGCCGATGGCAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043500.1\|WP_003472726.1\|805051_806029_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP043500.1\|WP_081045889.1\|807408_809754_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235297
NZ_CP043500.1\|WP_058195640.1\|809863_810769_-\|histone-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|212541
NZ_CP043500.1\|WP_003481596.1\|797722_798361_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP043500.1\|WP_047325540.1\|801989_802490_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NZ_CP043500.1\|WP_003481597.1\|796896_797646_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP043500.1\|WP_003472733.1\|803548_803932_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP043500.1\|WP_058364533.1\|794249_795530_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP043500.1\|WP_004426017.1\|791943_792546_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226647
NZ_CP043500.1\|WP_004426029.1\|799492_799984_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226285
NZ_CP043500.1\|WP_003481607.1\|793428_794142_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP043500.1\|WP_003472731.1\|804147_804942_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP043500.1\|WP_004426028.1\|798548_799493_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP043500.1\|WP_047324566.1\|802608_803538_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP043500.1\|WP_047324565.1\|800209_801091_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|234599
NZ_CP043500.1\|WP_003472723.1\|806032_807412_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236758
NZ_CP043500.1\|WP_038237781.1\|792734_793337_+\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP043500.1\|WP_004426026.1\|796475_796856_+\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|260133
NZ_CP043500.1\|WP_047324563.1\|795574_796282_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239946
NZ_CP043500.1\|WP_004426031.1\|801087_801882_+\|thymidylate-synthase	unknown	unknown	gnl\|CDD\|234984

Protein	Function_ID	Function_description	E-value
NZ_CP043500.1\|WP_003472726.1\|805051_806029_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	1.59041e-154
NZ_CP043500.1\|WP_081045889.1\|807408_809754_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235297	PRK04423, PRK04423, LPS-assembly protein LptD.	0
NZ_CP043500.1\|WP_058195640.1\|809863_810769_-\|histone-deacetylase-family-protein	gnl\|CDD\|212541	cd11599, HDAC_classII_2, Histone deacetylases and histone-like deacetylases, classII. This subfamily includes eukaryotic as well as bacterial Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. In D. discoideum, where four homologs (HdaA, HdaB, HdaC, HdaD) have been identified, HDAC activity is important for regulating the timing of gene expression during development. Also, inhibition of HDAC activity by trichostatin A is shown to cause hyperacetylation of the histone and a delay in cell aggregation and differentiation.	6.18286e-155
NZ_CP043500.1\|WP_003481596.1\|797722_798361_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.78118e-80
NZ_CP043500.1\|WP_047325540.1\|801989_802490_+\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	1.84931e-72
NZ_CP043500.1\|WP_003481597.1\|796896_797646_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	2.90786e-69
NZ_CP043500.1\|WP_003472733.1\|803548_803932_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	4.90079e-76
NZ_CP043500.1\|WP_058364533.1\|794249_795530_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.23212e-49
NZ_CP043500.1\|WP_004426017.1\|791943_792546_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226647	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	1.53597e-92
NZ_CP043500.1\|WP_004426029.1\|799492_799984_+\|hypothetical-protein	gnl\|CDD\|226285	COG3762, COG3762, Predicted membrane protein [Function unknown].	9.86203e-19
NZ_CP043500.1\|WP_003481607.1\|793428_794142_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.44368e-75
NZ_CP043500.1\|WP_003472731.1\|804147_804942_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	7.97576e-130
NZ_CP043500.1\|WP_004426028.1\|798548_799493_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	2.41879e-61
NZ_CP043500.1\|WP_047324566.1\|802608_803538_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	1.67935e-144
NZ_CP043500.1\|WP_047324565.1\|800209_801091_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|234599	PRK00052, PRK00052, prolipoprotein diacylglyceryl transferase; Reviewed.	1.2959e-105
NZ_CP043500.1\|WP_003472723.1\|806032_807412_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	1.75123e-99
NZ_CP043500.1\|WP_038237781.1\|792734_793337_+\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	2.20232e-87
NZ_CP043500.1\|WP_004426026.1\|796475_796856_+\|diacylglycerol-kinase	gnl\|CDD\|260133	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase. This mostly bacterial family of homo-trimeric integral membrane enzymes, the products of the dgkA gene, catalyzes the ATP-dependent phosphorylation of diacylglycerol to phosphatidic acid. Escherichia coli DAGK participates in the membrane-derived oligosaccharide cycle (MDO cycle) by recycling lipids to restore phosphatidylglycerols that were used up in the biosynthesis of MDOs. DAGK also recycles diacylglycerols that are produced during the biosynthesis of lipopolysaccharides (LPS) back to phospholipids. DAGK is not the main source of phosphatidic acid in de-novo biosynthesis of glycerophospholipids. Escherichia coli DAGK has low activity as an undecaprenol kinase.	8.29828e-47
NZ_CP043500.1\|WP_047324563.1\|795574_796282_-\|hypothetical-protein	gnl\|CDD\|239946	cd04502, SGNH_hydrolase_like_7, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	1.02673e-82
NZ_CP043500.1\|WP_004426031.1\|801087_801882_+\|thymidylate-synthase	gnl\|CDD\|234984	PRK01827, thyA, thymidylate synthase; Reviewed.	0

>NZ_CP043500.1|WP_004426029.1|799492_799984_+|hypothetical-protein
MRLLRHLFAPAARRLFPNASLERIGAAIADGERTHRGQVMFAVESALAPAAVLRGLAPRARAEQAFAQLRTWDTEANNGVLIYLLLAEHRIEIVADRGLRGRIDPAQWRAVCALIERDMRAGQPEQAVIAGVAAVSALLATHFPVQPGQAESDELPNMPQLLD
>NZ_CP043500.1|WP_004426028.1|798548_799493_+|hypothetical-protein
MTDAITRQRPARRGRRAWIGVLLLALLPLLAWAQASSEAPIPPLDTPVVDTTGTLQPTQRLALEQQAVQLQQRKGSQLQVLMVATTAPETIEQYTQRVFDKWQIGRKGVDDGVLLVVAKDDRRVRIQPGYGLEGAIPDATANRIIQEYLVPRFRAGDYSGGIAEATAMLVKLIDGEQLPPPVSTHAAESRSGGKLPLGFFAGLFAAFVAQLLFARAPRLLRGVLAAVAGGGVGLLLSLSLFVGVLTGAIGLVLGLLSGISPGRSVGGGGGGGWGGGGFGGFGGGGFGGGGGFGGGGGWGGGGGSSGGGGASGSW
>NZ_CP043500.1|WP_003481596.1|797722_798361_+|LemA-family-protein
MRLLSRSLLLAAVAVLLSGCGYNAIQQKDEAVKAGWSEVLNQYKRRADLIPNLVNTVKGYADQERQVLTDVTNARARVGQVQVNADDAASLQQFQQAQGQLSSALSRLLVVTENYPNLKSDQSFRDLQAQLEGTENRITVARGRYIQAVQDYNTYIRSFPQVITSKIFGYKEKPNFSVANEAQISEAPAVNFGGQPAAPKPPQQSPQPAPAQ
>NZ_CP043500.1|WP_003481597.1|796896_797646_+|TerC-family-protein
MAFEFLADPNTWLTLLTLSALEIVLGIDNLVFISIAVGKLPEARRPAARKFGIAVACLTRIALLVSLAFLARMQGELFSVAGMGISVRDLVLIVGGVFLLVKGTMEIREMITGGEDADPTTSKASGVFWMVIAQIAVIDIVFSLDSVITAVGMSQHIPVMVAAVLLAVAVMLLAANPLGRFIDANPTVKMLALAFILMIGVVLILDGLDVHVPKPYIYTAMGFSVLVEWLNLLMRRRAAAHHVPGAGQW
>NZ_CP043500.1|WP_004426026.1|796475_796856_+|diacylglycerol-kinase
MADQFGHLPRGPRRMLMALRWSYQGLRAAWLHESSFRLEACLFVLLAPLALWLGQGPLQQALMIGSLLLVLAVELLNSAIEAVIERYGPEHHELAGRAKDMGSAAVLLMLANVVLCWGLILLPRLL
>NZ_CP043500.1|WP_047324563.1|795574_796282_-|hypothetical-protein
MSRSPLRTALLASCLFLLGLHSALARAPAPPPQIPAQVSSPAWEQDMQRFAQADAAYPPKRGGVLFVGSSSIRLWTSLASDFPGVDTLNRGFGGSEIRDSTWYADRIVVPYRPRLIVFYAGDNDLNSGRSPQQLRENFLAFVARVRRDLPKTRIAYLSIKPSPARAALLPQVADANALIRKAAAGLKQVDFIDVYTPMLDADGRPRGELFGPDHLHMNAAGYALWRDTVRPYVKR
>NZ_CP043500.1|WP_058364533.1|794249_795530_+|HAMP-domain-containing-histidine-kinase
MPHGLPRKIRLALIARILFAACIVALGSYLVVAVVQHSLVGSVMREEAAHYWRLHAQSPAQPPPNSHTLRGYLVPAGQSDAAVPAELRGLDLGLHENRPGGEMVLVDETTAGRLYLVFLRAQAQRLAFWFGIVPALLTLIAVVVVGWLTHRASRRLLSPVNWLARRVSQWDPRHPSTADLAPENLPADVQGESRQLAAALHSLALRVTDHVSRERNFTRDASHELRTPLTVIRVASDIAMTDPDLSPRLSRGLQRIQRAGRDMEAVIDAFLILAREADVEPQSETFEVADVVEYEAENARELLTGKPVTLSVSVAAATRLHAPPRVLHVVVSNLLRNACSYTDAGSIEVEVGSDRISIRDTGIGMSSEALQRAFEPFFRAEPDRPQGTGLGLSIVRRLCERFGWRIGLESAEGGGTTATVRFDPIK
>NZ_CP043500.1|WP_003481607.1|793428_794142_+|response-regulator-transcription-factor
MRQTKETSGLVLVVEDNRNISEMIGEYLEGRGFEVDYACDGLDGYRLAAENSYDVVVLDLMLPRLDGIEVCRRLRNDARKSTPVLMLTARDTLDDKLTGLGFGADDYLTKPFAIQELEARLRALIRRERRQVGSEVLKVADLVLDPVSMRATRAGTELQLSPIGLRLLTILMRESPRVVTRQEIEREIWGNGLPDSDTLRSHLYNLRKIIDKPFDRPLLHTVQSAGYRIADIAQPMS
>NZ_CP043500.1|WP_038237781.1|792734_793337_+|arylesterase
MAWCLLLPAIACAKGAAGPVLVVGDSLSAAHNIPLQSGWVALLERRLQQQMQAPPSVVNASISGETSSGALTRLPALLQKHRPAVVVIELGGNDALRGLTPAELRGNLEKMIVLSRDAGAKVLLLGIDVPPNYGPAYRQRLRAVYADLARQYQTGLLPFLLEGVALNPALMQDDGLHPTAAGQPKVLDSVWPKLKPLIGG
>NZ_CP043500.1|WP_004426017.1|791943_792546_-|ATP-binding-cassette-domain-containing-protein
MTIGEGDSVAIVGASGSGKTTLLGLLAGLDLPTRGEIVLAGQSLNALDEEARAALRAREVGFVFQSFHLLPSLTAAENIALPLELAGREDPARVREVLEAVGLTARARHYPRQLSGGEQQRVALARAFVARPRILFADEPTGSLDQATGQQISDLLFALNAGSDTTLVLVTHDLRLAQRCEHRYRLDRGRLRQAEAVADA
>NZ_CP043500.1|WP_047324565.1|800209_801091_+|prolipoprotein-diacylglyceryl-transferase
MTYLHQIDPIAFSLGPVKVHWYGLMYLAAFASAWWLGRLRIRAGRLPGVDMDGFSDLLFYAMLGVVLGGRIGYMLFYALHDFLANPLLIFKVWDGGMSFHGGLIGVLVAAAWWSRKSRLHFFDTMDFVAPLVPLGLGFGRVGNFVGGELWGKFTNAGWGVIFPRTPELQDWPLAQIQAQYASGALDKFARHPSQLYEAALEGLVLFALLWTFSLRPRRRYAVSGLFALLYGVFRFAVEFVRVPDAPIGYLAFHWLTMGQILSTPLILLGLFLLWRSRRAPVLQPVPVALDATP
>NZ_CP043500.1|WP_004426031.1|801087_801882_+|thymidylate-synthase
MKAYLDLLRHVLEHGAEKSDRTGTGTRSVFGWQMRFDLNAGFPLVTTKKLHLRSIVHELLWFLKGETNIAYLKDNKVSIWDEWADAQGELGPVYGKQWRRWTGADGREIDQMQWLVDEIKRNPDSRRLVISAWNVAELPQMALMPCHSLFQFYVVDGTLSCQLYQRSGDIFLGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLARTPRPLPTLRLNPAVSDLFAFTYDDIAIEGYDPHPAIKAPVAV
>NZ_CP043500.1|WP_047325540.1|801989_802490_+|dihydrofolate-reductase
MTLIAALDRGNAIGRDNDLPWRLPDDLKRFKALTLGKPVLMGRKTAQSLGRALPGRLNLVLTRSGQVPFEGMQAVASLSAAIEAAQASGAGELAVIGGGDIFALALPHAEMLYLTHVDTLVEGADAHFPAFDPAQWEVVARQAHAADARHALAFEFVDYRRRRSAP
>NZ_CP043500.1|WP_047324566.1|802608_803538_-|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MSVWAIGDLQGCYDITQRLLEKIRFDPAVDRLWFCGDLVNRGGQSLETLRLVHSLRAHSVVVLGNHDLSLLAIGERSLDEQRKVNADLQRIVLAEDRDELLTWLRMQKLLHADRELGWMMIHAGLAPKWTTTLAEKHAREVEQQLHGSGYRKLFSNMYGDRPAWSPGLTGYDRARAIINLFTRARYCTPRGRIAIEEKGTPGTQAQGLYPWFEVPGRAERDLKIVCGHWSTLGLAITQGVHAIDTGAVWGGKLTALRLDSEDLQVVQVPGRPIEGPPPVQRTRPPRRRTGGGRGAGGGAAAASPPPDQE
>NZ_CP043500.1|WP_003472733.1|803548_803932_-|Co2+/Mg2+-efflux-protein-ApaG
MNDDAPYRIEVEVSPRFLDDQSTPEDGRYAFAYTIRIHNRGRVAARLIARHWEITDGNGRVERVDGDGVVGEQPRLRPGEDFRYTSGLMLETEHGTMRGHYDMEADDGTHFVAPVAPFVLTMPRTLH
>NZ_CP043500.1|WP_003472731.1|804147_804942_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MTSYSGFSAPAKKSLGQHFLSDRHYIDSIVRAVNPKPDELLVEIGPGQGAITFPLLRRHGRLTVIEFDRDLIAPLTAAAEGVGALTILNRDVLSVDFAELAGANRIRLVGNLPYNISSPILFHALDHAAAIADMHFMLQKEVVDRMAAGPGSKVYGRLSVMLQAYCEVTSLFVVPPGAFRPPPKVDSAVVRLVPHAPQDIGIADRRRFADVVRAAFGQRRKTLRNALGGVCDAAQFEAAGVRPDARAEQLEVADFVRLANVAQA
>NZ_CP043500.1|WP_003472726.1|805051_806029_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MLPPLALVPGEPAGIGPELCVRLAQQPRRDCQLLAFADPDSLRAAAAALSLPLQLLPESAPALAPGDLRLRPVRNALPSRFGHTEPANAAAVIGALIQAADACLRGELAGLVTGPVHKAAINAGGIAYTGTTELLARHAGCEVVMMLANDIVRVALATTHLPLRAVADALTPALLERCLRIVHAALRSDFGIAAPVIAVLGLNPHAGEDGHLGREEIEVMAPVLDALRGEGMHLLGPLPADTAFLPQKLAGVDTVLAMYHDQGLPVLKYSGFERAVNLTLGLPYPRVAVDHGTALELAGRGSADPSSLFAAVAQCAQLAARRAHL
>NZ_CP043500.1|WP_003472723.1|806032_807412_-|peptidyl-prolyl-cis-trans-isomerase
MTNTLSVFLATLLAIAGVSAPAAAQQTQPLDRIAAVVDEDVVLQSELDRAVRNVKAQYAGREAQLPPDNVLQRQVLERLVLVKLQVARANSTGIRVGDDELNRAIGSIAQQNGTDVDGLRKKLAADGMAFDDFRNSVRDEITVQRLRQSFAQSRINVSESEVDAALAQQATTGAQYHLAHILVGLPEGATADQIKTGQGKIDGVKSLIDKGEIDFGAAAVRYSDSPNALEGGDLGWRSLDEIPNAFAQLIRDMKPGQVAGPLRGPSGFQLLKLVEIRDASANPEKKTVTEYHARHILIRVNEAQPDAAAKAKIETLRARIAGGADFQAVAKESSDDANSRGQGGDLGWFPVDAFGPDFGHQIEGLSDNQISQPFRTEAGWHIVQRVATRQTDVTSDSQRAQVRETIGRRKLEEEYNRFLQEMRGEAYVNLRVGGAESAAAPAADATAPAAPPAPAAAKK
>NZ_CP043500.1|WP_081045889.1|807408_809754_-|LPS-assembly-protein-LptD
MRRALRLLPLPFSIALCLPAMAAEKPPNWGLCPTPDVLPKFDDAPKVDPKMAALRDQQPTDIVGDKLSGTTTLPNYDGNVALKRGDQFMGTDSLRVDTETGNYIAEGHVRYQDSSIRMVADRAEGNQDTDTHKITNIRYQLIERRGNGKADSVDLQGALGQMHRSTYTTCDPSQPVWELHAPEIDVDNDEGFGTARNAVLKIYNVPILYAPWFKFPIDDRRTSGFLFPAIGLSGRNGFDYMQPYYLNLAPNYDATLYPRYMSSRGFMLGSEFRYLYDGGKGDIQSTYMPNDRLRDKDRGKFEYQGYHNLDSHWQARASVAWVSDERYTEDFSRRLLGNSVSNLQSTVGVYGTGETWTGGLMADRWQLTDYTLTEDALPYNRQPRAFFNWDQSFGNYFEAGLYSEAVRFVHDDVHAKDALFARTGMTTDKPGGTRLDLKPYLSMPLAGAAWFLKPTVAWRYTAYQLDKDLAATLGGDTSPTRSLPITTVDAGLYFDRDATFGDTSYLQTLEPRLFYLYTPYRNQDDLPIFDTREFTFSWGQLFRDSRYTGADRQNDANQMTLALSSRLLRQDDGKEKLSVSLGQILYFNDSLVSLPGSNTSIQQGKSAWIADANYMLNDRWTMGATYQWDPKYRRKDLASFRTRYLLPGDGIINVSYRFRRDLLEQTDVSVLYPINPTWSLVGRHYYSLQDSKPLEIIAGVQWDSCCLAVRALARRYVRNREGDLDTAFQVEFVLKGLSSLGQDTDRVLRRAILGYNRDDLYLVPPSNTTSDPDAYDPNLIP
>NZ_CP043500.1|WP_058195640.1|809863_810769_-|histone-deacetylase-family-protein
MLIYTHPACLGHEPGPEHPERPERLQAVTTALREAFPDLEWREAPLAKLGDLARVHERELIDSVLADIDGKRVLDVDTALSPGSRAAALRAAGAGLAAVDAVLHGATDTAFCAVRPPGHHATATTAMGFCLFNNIAVAAAHARDTHGLERIAIVDFDVHHGNGTQAIFERDPRVQYLSTHQSGLFPNSGGVHDRGVGNLHNALLPPGSGGFRFRNTWADQMLPLLDAFKPQLLLISAGFDAHMRDPLADLMLETEDFAWLTAELRALAQRHARGRVVSLLEGGYDLQALRECSVAHVDALR

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Crispr_ID: NZ_CP043500_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043500_3

2588582-2588725

Orphan

Consensus_repeat	Method
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043500_3

>merge|NZ_CP043500|3|2588582-2588725|CRISPRCasFinder
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAGTTCCTCGACCGCTTGCAGCGCCTACTTGCCGCCGTCGTGGCTGGCGATAGCCACCACCTACTCGGTGCTCAGACCATGATCGCGCTTCAGCCGCGGCAGCAG

>NZ_CP043500|3|3|2588582-2588725|CRISPRCasFinder
CTCGGTGCTCAGACCATGATCGTGCTTCAGCCGCGGCAGCAG	TTCCTCGACCGCTTGCAGCGCCTACTTGCCGCCGTCGTGGCTGGCGATAGCCACCACCTA
CTCGGTGCTCAGACCATGATCGCGCTTCAGCCGCGGCAGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043500.1\|WP_003471579.1\|2602335_2602833_-\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646
NZ_CP043500.1\|WP_080964778.1\|2589377_2590181_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|280446
NZ_CP043500.1\|WP_047324984.1\|2591830_2592820_-\|membrane-protein	unknown	unknown	gnl\|CDD\|238721
NZ_CP043500.1\|WP_003471587.1\|2595009_2597148_+\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|131155
NZ_CP043500.1\|WP_047324981.1\|2581429_2581753_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|378771
NZ_CP043500.1\|WP_003471614.1\|2586222_2586717_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003471588.1\|2594013_2594715_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP043500.1\|WP_003471618.1\|2584261_2584741_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224146
NZ_CP043500.1\|WP_003471586.1\|2597735_2597906_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|283241
NZ_CP043500.1\|WP_003471624.1\|2582008_2582542_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225854
NZ_CP043500.1\|WP_058364124.1\|2586786_2587455_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP043500.1\|WP_047324982.1\|2582559_2583468_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP043500.1\|WP_058363752.1\|2587568_2588276_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_058364143.1\|2592925_2593846_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP043500.1\|WP_058364126.1\|2580447_2581347_+\|2-dehydro-3-deoxygalactonokinase	unknown	unknown	gnl\|CDD\|377446
NZ_CP043500.1\|WP_058364125.1\|2584825_2586226_+\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224787
NZ_CP043500.1\|WP_003475101.1\|2583624_2584200_+\|glycine-cleavage-system-protein-R	unknown	unknown	gnl\|CDD\|225337
NZ_CP043500.1\|WP_058359156.1\|2599580_2602229_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP043500.1\|WP_003471584.1\|2599232_2599442_-\|carbon-storage-regulator-CsrA	unknown	unknown	gnl\|CDD\|234973
NZ_CP043500.1\|WP_003471593.1\|2590320_2591130_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561

Protein	Function_ID	Function_description	E-value
NZ_CP043500.1\|WP_003471579.1\|2602335_2602833_-\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	1.64084e-46
NZ_CP043500.1\|WP_003471593.1\|2590320_2591130_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	3.66556e-118
NZ_CP043500.1\|WP_047324984.1\|2591830_2592820_-\|membrane-protein	gnl\|CDD\|238721	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.	1.19084e-26
NZ_CP043500.1\|WP_003471587.1\|2595009_2597148_+\|glycogen-debranching-protein-GlgX	gnl\|CDD\|131155	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP043500.1\|WP_047324981.1\|2581429_2581753_+\|ferredoxin-family-protein	gnl\|CDD\|378771	pfam11953, DUF3470, Domain of unknown function (DUF3470). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 50 amino acids in length. This domain is found associated with pfam00037. This domain has a single completely conserved residue N that may be functionally important.	2.89139e-17
NZ_CP043500.1\|WP_003471588.1\|2594013_2594715_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.89275e-79
NZ_CP043500.1\|WP_003471618.1\|2584261_2584741_+\|peroxiredoxin	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	9.58844e-69
NZ_CP043500.1\|WP_003471624.1\|2582008_2582542_-\|hypothetical-protein	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	0.00277
NZ_CP043500.1\|WP_058364124.1\|2586786_2587455_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	6.33605e-36
NZ_CP043500.1\|WP_047324982.1\|2582559_2583468_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	9.41518e-125
NZ_CP043500.1\|WP_058364125.1\|2584825_2586226_+\|PhoH-family-protein	gnl\|CDD\|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	0
NZ_CP043500.1\|WP_058364143.1\|2592925_2593846_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	1.40085e-68
NZ_CP043500.1\|WP_058364126.1\|2580447_2581347_+\|2-dehydro-3-deoxygalactonokinase	gnl\|CDD\|377446	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase. 2-keto-3-deoxy-galactonokinase EC:2.7.1.58 catalyzes the second step in D-galactonate degradation.	1.25142e-110
NZ_CP043500.1\|WP_003471586.1\|2597735_2597906_+\|CsbD-family-protein	gnl\|CDD\|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	1.77569e-08
NZ_CP043500.1\|WP_003475101.1\|2583624_2584200_+\|glycine-cleavage-system-protein-R	gnl\|CDD\|225337	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism].	1.74065e-74
NZ_CP043500.1\|WP_058359156.1\|2599580_2602229_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP043500.1\|WP_003471584.1\|2599232_2599442_-\|carbon-storage-regulator-CsrA	gnl\|CDD\|234973	PRK01712, PRK01712, carbon storage regulator CsrA.	8.74526e-34
NZ_CP043500.1\|WP_080964778.1\|2589377_2590181_+\|IS4-family-transposase	gnl\|CDD\|280446	pfam02281, Dimer_Tnp_Tn5, Transposase Tn5 dimerization domain. Transposons are mobile DNA sequences capable of replication and insertion into the chromosome. Typically transposons code for the transposase enzyme, which catalyzes insertion, found between terminal inverted repeats. Tn5 has a unique method of self- regulation in which a truncated version of the transposase enzyme acts as an inhibitor. The catalytic domain of the Tn5 transposon is found in pfam01609. This domain mediates dimerization in the known structure.	5.65884e-14

>NZ_CP043500.1|WP_058363752.1|2587568_2588276_-|hypothetical-protein
MPEPTAHNVPDARRVVEVVGFFQCHRAPLHAFNEALTTFKLSRPALLQLLQRVGVAELEAIGGTIPDASQRWERIVRNLGVSRAAAAQAPSEPSSPTLAAALERILEASSPVRSPSPVAQASTSSGRRKRALPDVAADTPPARPSWRRSAGSALASGLQDTLGSLLSWGQRRKRTHFADGLLDPGTPPLEFLRQCCDRNDPLRLQPPAPAAALVADEAFSPLRQEDFDWLMQFLG
>NZ_CP043500.1|WP_058364124.1|2586786_2587455_+|DUF1275-domain-containing-protein
MNVELPRWAWAFAGALACVAGMVNVVGYLGFEHQAVTHLTGTTTLLGAALADGDLRVIGQLLGVVLAFLGGAVLSGIVVQDSRLRLGRRYGVALALEALLLLAAMQAFKQQQLLGALFAASACGLQNAMTTTYSGAVVRTTHLTGMFTDLGIGLGQALRGLPLPRGRIRLSLLIIGGFLLGGVLGAWAYRHVGFDALLAPALLTGLVGTTYTVQAHYRRRER
>NZ_CP043500.1|WP_003471614.1|2586222_2586717_+|hypothetical-protein
MNAANARRLGGAVLALALLGACSTARGPASVPTAIKVGQSWIVTRNSAAAEVLDTCSRDSPARQGGVLSGYWVPTIEQIAQLEARLPQLQPTIAAPASADRQYVGILYRGKHAIYVNAFKPHDDRDVDPSVDAVRVCGGGSGFWGAVFDPVSGTFSEIAVNDAK
>NZ_CP043500.1|WP_058364125.1|2584825_2586226_+|PhoH-family-protein
MTRGKRIYVLDTNVLMHDPTALFKFEEHDVFLPMQVIEELDNAKKGMSEVSRNARQVSRFLNELIEGAGAEQIESGIPLSHPQGIQLKSSGSIGRLYFQIRPVEPGRSFGTVAPDNNILAAVLALREEGPETPVILVSKDINLRIKAAISGLIAEDYENDRALDDFSLLYTGAIELPEDFWQKHNQDLRSWSDKGRTCYEIALANDEDWYPNQYLYLPGDDEVELRVVKVSGERKATLALVDDFRSGQHAVWGITARNREQNFALNALMDPEIDFVTLLGTAGTGKTLLALAAGLAQTMDQQRYREIIMTRATVSVGEDIGFLPGTEEEKMTPWMGALTDNLEVLTHNQEGGAWGRAATNDLLASRIKIRSMNFMRGRTFLSRYLILDEAQNLTPKQMKTLITRAGPGTKIVCLGNVEQIDTPYLTETTSGLTYAVDRFKAWPHSAHVTLRRGERSRLADYASEVL
>NZ_CP043500.1|WP_003471618.1|2584261_2584741_+|peroxiredoxin
MKDGDTLDRTTLALPLALSGGTSATLGDYAGRWLVLYFYPKDSTPGCTTEGIDFNALLPQFEQADAAVLGVSRDSLKSHDNFCAKQGFRFPLVSDADEALCRAFDVIKEKNMYGRQVLGIERSTFLISPSGRLLRSWRKVKVPGHAQAVFDALQAAAQQ
>NZ_CP043500.1|WP_003475101.1|2583624_2584200_+|glycine-cleavage-system-protein-R
MPEAPLTDTTPRPAPTENHLLINAYTTHPESPLLPVTRRIADSGCNLVDARLATVGRDVSVTALATGSWDAVAKLEAMLTRLDREEGMKLVWYRTGAKQAQSNLLPYIVEVIAADKPGILFQLADFFDRQGITIENLQSTRYRAMQTGAEMFSAQVTIGVPANMHIAALRDDFLEFCDHLNLDAIMDPMKF
>NZ_CP043500.1|WP_047324982.1|2582559_2583468_-|4-hydroxy-tetrahydrodipicolinate-synthase
MSLSGIITALATPFQGNGDLDLDAWQRLLKRQLDAGVQGVVVAGSTGEAATLLDEEYDLILREAAQVIGARVPLLAGTGLSGTARTVALTRRAAANGAQYALVVTPPYVRPTQAGLLAHYLQVAEHGGLPVVLYNVPGRTGCDLLSDTVAHLAQHPNIVGIKDASSDPQRIAALLALRSDGFAVLSGDDGSAAQAMLGGYDGLISVASNALPASYRRLCDLARARQAEPAQAWDARLQPFHAFCGIESNPIPVKALLQRAGIGQGLRLPLLPLSAAHHATADRLATDAAALEELSSRETLAA
>NZ_CP043500.1|WP_003471624.1|2582008_2582542_-|hypothetical-protein
MRASVPYVRVLSAAVLATTMVAATSGCSWFHKGKPRGDYALAPEMRPLEVPPDLTAPDTSAAMKVPALASATQRPGASSAPGQAPAASNSGFVVPGARDQVFGQVGDALGGIAGVTIASRAQVLGSYDVAYEGSNFLVRVVAVEAGVYVSAVDPRGMPASGDAPVKLIAALKAKLGH
>NZ_CP043500.1|WP_047324981.1|2581429_2581753_+|ferredoxin-family-protein
MPFVVTENCIKCKYTDCVEVCPVDCFHMGPNFMVIDPDECIDCTLCEPECPANAIYPEDDVPAGQEGFVALNAELAKAWPVLTTRQEPLPDAAEWDGKPNKLPLLLK
>NZ_CP043500.1|WP_058364126.1|2580447_2581347_+|2-dehydro-3-deoxygalactonokinase
MIAIDWGTSSLRGYRLAADGRVLEQRRSDQGIGACQGRFAATLAALIDGWPGDVALCGMIGSRNGWIELPYATCPADADALAAAMQPLQDPALPGRTLWFVPGVASSTEAVPDVMRGEETQLIGLIEILAQEPQGAGRHSVCLPGTHSKWVDLEYGRIAALATMMTGELYALLRQHSLLARLMDADDAQFDGAGFDAGLQRSGAPGGLLHHLFGVRSLGLFERLSAAAAPSYLSGLLIGHELRARLPLAPSVHLIGGSGLLDRYAHALRALGSQVRSHPEDLAAHGLYRLAQRRGGIGH
>NZ_CP043500.1|WP_080964778.1|2589377_2590181_+|IS4-family-transposase
MRYKHGQAQRYVVRAQSDRGLAQGGQPLFGGLSGEQRWQYEATVEVTQRGGRAARKARVQMCGRRLEVKPPADRGKQAVSLPVNVVLVREPAGSEHEPLNWVLLTSEPVETVKQVKQIVGYYELRWRIEEYHKAWKSGVGVERLRQHSAQNLERMQVITAFVAVRLLQLREQLPSRADKEEVQAALPCDQILGAEEWRVLWLTVKKTAPPLTPPTARWACLAVARLGGFTDTKRTGRPGWVTLWHGWQVLQERVAGFRLATGMTALM
>NZ_CP043500.1|WP_003471593.1|2590320_2591130_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MSEPTVVSALSIAGTDSGGGAGIQADLKTFAAHRVHGLSAVAALTAQHTRGVAAVHVPPLPFLRAQIDACFADFDIGAVKLGMLANAAVIHLVADALEQYRPPFVVLDPVMVATSGAKLLEDDALDALRHRLLPLATLVTPNAPEAQLLLGRTIENGEDAEHATAALLDAGAQAVLLKGGHLDEGHRVIDRYDDGVSRSEFSHVRLALQAHGTGCTLAAAIAAQLCQGLALPVACEAAIDYVARALQGGYRPGRSEVVVLDHFGAARHA
>NZ_CP043500.1|WP_047324984.1|2591830_2592820_-|membrane-protein
MQELIARYGLGLVFVNVLALSLGLPVPALPTLILVGATYAVLHGSAVWSGLLAALSVSIVASLIGDLVWFGAGRRYGNRTLQSLCRLSLSRDTCMKQTERFYTRWGVRVLAVAKFIPGLSMVSVPMAGAMRVRPGQFLRYDALGAALWAGCGLLLGLAFADQVHDVLDWLSLLGTRAVLLLAGLLVLYIGYRAWRRHALLKSMETLRINVDELYALMQGEAVPVLLDIRAPGYRAIEPFAIPGALEVDDRRIDAIVAALPRDRKIVIYCACPNEVSAAVLATRLRQRHYEDVLPLRGGLHAWRAAGYAVIELDGGAAAQVDGVGGKVAA
>NZ_CP043500.1|WP_058364143.1|2592925_2593846_-|LysR-family-transcriptional-regulator
MISLDALQIIDAIDRRGSFSAAGKALSKVPSTISYTVAKLEQDLGVQLFERLGPKVALTAAGAELLREGRHLLRAAADLELRVRRVASGWETEFALGLDSLFAPDCLAEDIAAFYAVADRTRLRIVQESLSGTWEALLDRRVDLLLGAAGEGPSGGGYVAEAFGTLAFVFVVAPTHPLAQAAEPLGRSQLAEHRAIAVADSARRLLPRTVGLLFGQDALTVPDMRSKYLLQLAGLGFGFLPEPYARAALACGALLRKQVEEPKPDEVFQLAWRSGEEGAALAWWRTRMRQPGVFEAWLAQLQARLD
>NZ_CP043500.1|WP_003471588.1|2594013_2594715_+|pirin-family-protein
MLQIRTSDSRGRAEHGWLSSRHTFSFGHYHDPRHMGVGPLRVINEDRVQPGQGFGTHAHRDMEILSYVLDGALEHRDSMGNGSVLRYGDVQRMSAGSGVTHSEFNHSVSEPLHFLQIWLLPERAGIAPGYEEKHFTAQTKRGQLRLIAAPQGEDGAVRIHQDARIYAAILDGAERIAYPLASGRGAYVQVIRGALTVNGQALQAGDAAQSVDEAELHFADAQDTEFLLFDLPR
>NZ_CP043500.1|WP_003471587.1|2595009_2597148_+|glycogen-debranching-protein-GlgX
MRHPASAVYATPSRIRQGRPFPRGAMFDGQGTNFALFSAHATRVELCLFDDSGAETRLDLPEYTNEIWHGYLPDVQPGQRYGYRVHGPYAPGEGHRFNPNKLLLDPYAREIEGDLIWADELYGYTVGHPDGDLSFDERDSAPFMPKCVVVKDTYDWGDDARLQTPWSDTLVYETHVRGYTMRHPQVPQELRGTCAGLAQEPVLRYIKELGVSAVELLPVHAYLDDQHLLDKGLRNYWGYNTLGFFAIKSRYLASGQRDEFRDMVKAMHRQGLEVILDVVYNHTAEGSELGPTLSFRGIDNASYYRLAEDKRYYINDTGTGNTLNLSNSRVIQLVNDSLRYWAGEMHVDGFRFDLATILGREPTGFDQRGGFLDACNQDPLLSEVKLIAEPWDCGPGGYQVGHFPPGWSEWNDKFRDNARAFWKGDDGMLAEFATRFTGSADLFDRRGRRPWASLNFITAHDGFTLRDLVSYNDKHNDANGEDNRDGSNNDGSCNYGAEDASDDADILQLRERQSKNLLATLLLAQGTPMLLAGDERAQTQGGNNNTYCQDNEITWLDWDNDPTEGRLTDFVKALSALRKRYPILARGRFLNGQYNEEAGVRDLTWLNPGGTEMEEAHWTEAGARAIGLVLEGKAQTSGVKELANDDTLLIVINAYHEGVNFVLPSAEEALHWKLVLSTDETLQADTMPAGASDFLAPPRSVSVFEYQPPQPG
>NZ_CP043500.1|WP_003471586.1|2597735_2597906_+|CsbD-family-protein
MDKNRTEGAKNQIKGTVKEVVGKVTGNKLKEVEGKLQNGAGKIQSEVGKARDNARS
>NZ_CP043500.1|WP_003471584.1|2599232_2599442_-|carbon-storage-regulator-CsrA
MLILTRRVGETLMIGDSVTVTVLGVKGNQVRIGITAPKDVPVHREEIYQRIQRGDEPTSHGGHDDQSSD
>NZ_CP043500.1|WP_058359156.1|2599580_2602229_-|alanine--tRNA-ligase
MNAPAKFSTSQIRSDFLEFFNGKGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEKRSYVRAADVQRCLRAGGKHNDLDAVGYTARHHTFFEMLGNWSFGDYFKKEAIAWAWELLTQVWKLPAERLLVTVYHTDEQAYELWRDMIGVPPERIVRIGDNKGAPYASDNFWQMADTGPCGPCTEIFYDHGAHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQSDGTLVPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFQTLIRHASQLTGMADLENKSLRVIADHIRACSFLIVDGVLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFHKMAATLSDLMGQAYPELPAGLSTVQRALQAEEERFAETLDSGMKIFDEIAARASGSIPGADAFRLYDTYGFPVDLTADIARERGMDVDMAGFESAMERQRETARAAGKFGGGTTLPADLVAQLVPTVFLGYDALQADALKVVALLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQLSADSVLFQVEETQKFAGQFHGHVGQLRSGRLQVGATLSAQVDSDRRGATILNHSATHLLHAALREVLGTHVQQKGSLVAPDRLRFDFSHFQPMSAAELAVIERKVNAQVRANHAVEVHHMGMQEALDFGAMALFGEKYGERVRVLKMGDYSTELCGGTHVARTGDIGLFKITSEGGVSAGVRRIEAVTGQGALDHVAAEEAKLHEAAELVGGSAVDVVEKIRQLGDRHKRLERELEALKAKLASGATADLAAAAVQVAGVKVLAVRLEGFDAKALREAMDRLKQQLGDSVIVLAGASEGKAALVAGVNGSPMGRVKAGELLGHIAGQISGKGGGRPDLAQGGGEDGPALALALEGVPAWVKQHLP
>NZ_CP043500.1|WP_003471579.1|2602335_2602833_-|recombination-regulator-RecX
MGDDEQHAQEPRRRRRQPEQTPLQQALGLLVRREHSRKELTRKLRARGVEPDAAATAVERLAGEGWQDDGRFAELLVRSRANTGYGPLHIRAELGTHGLDSEATATAMAAFDGDWSENARDLVQRRFGAAGPVDLPQRRKAANLLARRGFDGDSIRAATRYEPED

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Crispr_ID: NZ_CP043500_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043500_4

2806670-2807652

Orphan

Consensus_repeat	Method
GTGCTGCCGTAGCCGGCGGTCAA	CRISPRCasFinder

19 spacers

The CRISPR arrays of NZ_CP043500_4

>merge|NZ_CP043500|4|2806670-2807652|CRISPRCasFinder
GTACTGCCGTAGCCGGTGGTGAGCGAGCTGTCTTGCTGGGCGGTCTGCGTGCTGCCGTAGCCGGCCGTCAGCGAACTTTCGCTGCCAGCGGTCTGCGTGCTGCCGTAGCCGGCGATCAACGAACTGTCGGATCCGGCGGTGCCGGTGCTGCCGTAGCCGGCAGTGATGTCGCTGCCCTTGCGCGCGGTCTGCGTGCTGCCATAACCGGCTGTCAGCGAGCTGTCGCTGCCCGAGGTTTGCGTGCTGCCGTAACCGGCGATCAGCGTGCTGTCCGCACCGGCAGTGCCGGTACTGCCGTAACCGGCGGTGATGTCGCTGCCTTGCCGCGCCGTCTGCGTGCTGCCGTAGCCGGCGGTGAGAGAGCTTTCGCCGCCAGCGGTCTGCGTGCTGCCATAGCCCGCGATCAAGGTGCTGTCGGCACCCGCCGTGCCGGTACTGCCGTAGCCGGCGGTGACGTCGCTGCCCTTGCGTGCGGTCTGCGTGCTGCCGTAGCCGGCGGTCAAGGAACTCTCGCTGCCGGCGGTTTGGGTGCTGCCGTAGCCGGCGATCAACGCGCTGTCCGACCCGGCCGTACCGGTACTGCCATAGCCGGCGGTGATGTCGCTGCCCTTGCGCGCGGTCTGCGTGCTGCCGTAGCCAGCGGTCAAGGAACTCTCGCTACCGGCCGTTTGCGTGCTGCCGTAGCCGGAGATCACCGCGCTGTCAGAACCGCTGGTCGCAGTGCTGCCGTAACCGGAGGTGAGACGGCTGCCTTCCTGCGCCGTCTGCGTGCTGCCATAGCCGGCGGTGAGCGTGCTCCTGCCCGCGGCAGTCTGCGTGCTGCCATACCCTGCCAGGATGGAACTGTCGGATCCGGCGGTCCCGGTGCTGCCATAGCCGGCGATCAGATCGCTGTGATCGCCTGCGGTTTCGGTACTGCCGTAGCCTGCGACGAGCCGGCTATGGTCGGCGCCTGTGAGTGTGCTGCCATAGACACCGGTTTC

>NZ_CP043500|4|4|2806670-2807652|CRISPRCasFinder
GTACTGCCGTAGCCGGTGGTGAG	CGAGCTGTCTTGCTGGGCGGTCTGC
GTGCTGCCGTAGCCGGCCGTCAG	CGAACTTTCGCTGCCAGCGGTCTGC
GTGCTGCCGTAGCCGGCGATCAA	CGAACTGTCGGATCCGGCGGTGCCG
GTGCTGCCGTAGCCGGCAGTGAT	GTCGCTGCCCTTGCGCGCGGTCTGC
GTGCTGCCATAACCGGCTGTCAG	CGAGCTGTCGCTGCCCGAGGTTTGC
GTGCTGCCGTAACCGGCGATCAG	CGTGCTGTCCGCACCGGCAGTGCCG
GTACTGCCGTAACCGGCGGTGAT	GTCGCTGCCTTGCCGCGCCGTCTGC
GTGCTGCCGTAGCCGGCGGTGAG	AGAGCTTTCGCCGCCAGCGGTCTGC
GTGCTGCCATAGCCCGCGATCAA	GGTGCTGTCGGCACCCGCCGTGCCG
GTACTGCCGTAGCCGGCGGTGAC	GTCGCTGCCCTTGCGTGCGGTCTGC
GTGCTGCCGTAGCCGGCGGTCAA	GGAACTCTCGCTGCCGGCGGTTTGG
GTGCTGCCGTAGCCGGCGATCAA	CGCGCTGTCCGACCCGGCCGTACCG
GTACTGCCATAGCCGGCGGTGAT	GTCGCTGCCCTTGCGCGCGGTCTGC
GTGCTGCCGTAGCCAGCGGTCAA	GGAACTCTCGCTACCGGCCGTTTGC
GTGCTGCCGTAGCCGGAGATCAC	CGCGCTGTCAGAACCGCTGGTCGCA
GTGCTGCCGTAACCGGAGGTGAG	ACGGCTGCCTTCCTGCGCCGTCTGC
GTGCTGCCATAGCCGGCGGTGAG	CGTGCTCCTGCCCGCGGCAGTCTGCGTGCTGCCATACCCTGCCAGGATG
GAACTGTCGGATCCGGCGGTCCC	GGTGCTGCCATAGCCGGCGATCAGATCGCTGTGATCGCCTGCGGTTTCG
GTACTGCCGTAGCCTGCGACGAG	CCGGCTATGGTCGGCGCCTGTGAGT
GTGCTGCCATAGACACCGGTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043500.1\|WP_149569810.1\|2800653_2801898_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|226229
NZ_CP043500.1\|WP_058364165.1\|2791977_2793102_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP043500.1\|WP_058364157.1\|2820565_2821678_+\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
NZ_CP043500.1\|WP_003471221.1\|2795284_2796667_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP043500.1\|WP_003471227.1\|2799308_2800508_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP043500.1\|WP_058364162.1\|2808944_2809193_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003471214.1\|2789053_2790256_-\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP043500.1\|WP_003471230.1\|2801913_2803194_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP043500.1\|WP_003471257.1\|2815896_2816367_+\|DUF1203-domain-containing-protein	unknown	unknown	gnl\|CDD\|377693
NZ_CP043500.1\|WP_149569811.1\|2819201_2820500_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181707
NZ_CP043500.1\|WP_149569762.1\|2794694_2794976_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003471223.1\|2796679_2797435_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP043500.1\|WP_003471225.1\|2797694_2799074_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP043500.1\|WP_058359029.1\|2821703_2823197_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP043500.1\|WP_058359032.1\|2793200_2794565_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP043500.1\|WP_058364159.1\|2816719_2818222_-\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143430
NZ_CP043500.1\|WP_047325041.1\|2809182_2811531_-\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273765
NZ_CP043500.1\|WP_047325042.1\|2811527_2812367_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP043500.1\|WP_058364160.1\|2814214_2814733_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378934
NZ_CP043500.1\|WP_003473023.1\|2818310_2818859_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|182158

Protein	Function_ID	Function_description	E-value
NZ_CP043500.1\|WP_149569810.1\|2800653_2801898_+\|diguanylate-cyclase	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	3.5573e-73
NZ_CP043500.1\|WP_058364165.1\|2791977_2793102_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.14106e-173
NZ_CP043500.1\|WP_058364157.1\|2820565_2821678_+\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_CP043500.1\|WP_003471221.1\|2795284_2796667_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.38429e-154
NZ_CP043500.1\|WP_003471227.1\|2799308_2800508_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.43816e-65
NZ_CP043500.1\|WP_149569811.1\|2819201_2820500_+\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181707	PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional.	0
NZ_CP043500.1\|WP_003471214.1\|2789053_2790256_-\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	1.93856e-89
NZ_CP043500.1\|WP_003471230.1\|2801913_2803194_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.71101e-165
NZ_CP043500.1\|WP_003471257.1\|2815896_2816367_+\|DUF1203-domain-containing-protein	gnl\|CDD\|377693	pfam06718, DUF1203, Protein of unknown function (DUF1203). This family consists of several hypothetical bacterial proteins of around 155 residues in length. Family members are present in Rhizobium, Agrobacterium and Streptomyces species.	6.9574e-42
NZ_CP043500.1\|WP_003471223.1\|2796679_2797435_-\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.15347e-91
NZ_CP043500.1\|WP_003471225.1\|2797694_2799074_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.80515e-127
NZ_CP043500.1\|WP_058359029.1\|2821703_2823197_+\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP043500.1\|WP_058359032.1\|2793200_2794565_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP043500.1\|WP_058364159.1\|2816719_2818222_-\|aldehyde-dehydrogenase	gnl\|CDD\|143430	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.	0
NZ_CP043500.1\|WP_047325041.1\|2809182_2811531_-\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0
NZ_CP043500.1\|WP_047325042.1\|2811527_2812367_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	2.81256e-120
NZ_CP043500.1\|WP_058364160.1\|2814214_2814733_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378934	pfam12727, PBP_like, PBP superfamily domain. This family belongs to the periplasmic binding domain superfamily. It is often associated with a helix-turn-helix domain.	2.77351e-25
NZ_CP043500.1\|WP_003473023.1\|2818310_2818859_-\|cupin-domain-containing-protein	gnl\|CDD\|182158	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR.	3.4206e-44

>NZ_CP043500.1|WP_003471230.1|2801913_2803194_-|MHS-family-MFS-transporter
MTAAALPASPINSQHRVLLASLVGTTIEFFDFYIYATAAVLVFPTLFFPAGDADAARLQSLATFAVAFVARPVGSALFGHFGDRIGRKATLVAALLTMGLSTVVIGLLPGYASIGVWAPALLTLCRFGQGLGLGGEWGGAVLLATENAPPGRRAWYGMFPQLGAPLGFLLSSGIFLLLDAVLDDAQFMRWGWRIPFVASALLVVTGLWVRLRIHETPDFRKALERNARVALPMWTVLSRHAGALLLGSFGVFATFMLFYLITVFALGYGTSVLGYGREQFLLLQMVGILFLAAGIPLSAHCGDRYGTHRVMIAASLLIILFGLGFAPLFGAAHPWQLLAFLSLGSLFMGLTYGPCGTLLAELYPVQVRYTGASLSFNLAGIIGAAPAPYVASWLAKHYGLPWVGYYLSAGAALSLFALLAIGARRR
>NZ_CP043500.1|WP_149569810.1|2800653_2801898_+|diguanylate-cyclase
MLLVENSRTFTGLLREAIEQRVEPPVTVVSTLAEAADALDGGGSWFLALTGLVLADGDRDTVVDFFVARDLPTVVVSGVYDESLRKRVLTQQIIDFVLKNAPGSIDYLAWLVQRLARNRSIAALVVDDSRSARAYAASLLAMYGYQVVEAADGAAGLKAVEANPAIRLAVVDQEMPGMEGVEFTRRLRAIRARDKLAVIGLSGNSDPSLVPRFLKNGANDFLRKPFSREEFFCRVSQNVEQLELIGTLQDLATRDFLTGLPNRRHFLEQSQRLLPQWLARSDTVSVAMLDIDHFKHINDSWGHEAGDHALRAVATTVAAHARPQDLVARFGGEEFCMLVPGLDAPAASAYFETLRQRIDALQVQVGEQTLRITISIGVSRSDAQHDALHPLLSEADKHLYLAKAGGRNRVEHAR
>NZ_CP043500.1|WP_003471227.1|2799308_2800508_+|FAD-binding-oxidoreductase
MQADVCILGAGYTGLSAALALAEAGYQVAIVEAQRVGWGASGRNGGQAIVGYGCEQRTLETLLGHAEARLLFDFSRDGMRLLRERIQRHAIACDWRDGHAHVAIKPRQVRALQAGIAEMAQRYDYPLQWWDREQLREHLRSERYLGAMYDPASGHLHPLEYAHGLARAALAAGVRIYEHSPVTALVRGARPMLRTAHGEVQADFAVLAGNAWLRGIAPELESRIMPVGTYIGASAPLGAALACELIGNDMAVADVNWALDYFRLSRDHRLLFGGRASYSSLPPPGLRGVMTRRMRQVFPQLREVELDYVWGGYVDITRNRAPHWGRLTPNVYFAQGFSGHGVAATGLAGEVIAAAIDGQSQRLDLFARIPHAPFPGGRALRTPLLVAAMSWYKLRDALW
>NZ_CP043500.1|WP_003471225.1|2797694_2799074_+|glutamine-synthetase
MTRTHDAPPLPPDAAQALQRIPGCEQIDLLLPDSNGLLRGKRITRDALDKVYRDGVCLPMSLIATDITGNTVEETGLGYAIGDEDRLCFPIPGTLQPVPWAPVPSAQLLLAMRDDAGQALEFAPREVLARVLARLRARGLTPVIAVELEFYLFDPRADADGRPQPPLQAHTGLRNDSTQVYYMQELDDQRGFTDAVAQACRAQGIPADTAVAEYAPGQFEINLKHRSDALAACDDALMLKRAIKAIAQQQCLLASFMAKPFAAQSGSGLHLHVSLLDAAGDNVFAGTAQAPADALRHAIGGLQRSADDCLLLFAPHANSYRRFVPNAFVPLNDSWGFNNRTVAMRVPHSDPANTRIEHRIAGADANPYLVAAAVLAGIEHGLQHGFDPGPPVQGNAYAQTRIRHPDWRGAIADFLASDFVADRFGARFRHIYGQQKRREMLDFHAQVSDLDYRWYLRTV
>NZ_CP043500.1|WP_003471223.1|2796679_2797435_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MAVSPLVGLSTDRKPIGQHPFLVAGEKYLRAAVDGAGVTPVLLPSLQPPVAACDWLARLDGLLLTGAVSNIEPYHYGDEPSWPGNPHDPARDATTLDLIPQAIALGLPILAICRGFQEVNVALGGTLHQKVHALPWLSDHREDPQAPLDQQYAPVHEVTLSEGGWLADIAGKQRVRVNSLHGQGVAQLGGDLIVEALASDGLIEAFRGIGPGFLLGVQWHPEWRVLDDPFYLGIFQAFGDACRHYAARRTH
>NZ_CP043500.1|WP_003471221.1|2795284_2796667_-|glutamine-synthetase
MASRPRSRKNTPEQQESSLRRWLKDRHITEVECLVPDITGNARGKIIPAAKFSHDYGTRLPEGIFATTVTGEYPDDYYDLTSPSDSDMQLRPDPDTVRMVPWATDPTAQVIHDCYTKDGQPHELAPRNVLRGVLQAYAAIGFKPVVAPELEFFLVQKNTDPDFPLLPPAGRSGRPETARQSYSIDAVNEFDPILDLMYDYCDAMELDVDTLIHESGAAQLEVNFTHSDALSRADQVFLFKRTMREAAMRHGVYATFLAKPMENEPGSAMHIHQSLVDKHGKNVFSGRRAGEYSRTFGHYLAGLQKYVPMAMAVLAPNVNSYRRLMFGEVSPSNVLWGFDNRTCGLRVPIDTIENMRVESRFAGSDANPYLAMAATLACGLLGIREKLEPSAPISGNGKEMGYQLPRSLGEALDELERCTPLQEMLGPRFVRAYISVKRKEYETFFRVISSWEREFLLLNV
>NZ_CP043500.1|WP_149569762.1|2794694_2794976_-|hypothetical-protein
MLKVLWKKQREAKAKAKAFALGRESLFFARAKKSNQKKARPASRLPRCALQVRVHDGDSRKGHPAPAANGAHPCAPPLRGFSPPWPPLRKGTR
>NZ_CP043500.1|WP_058359032.1|2793200_2794565_-|aspartate-aminotransferase-family-protein
MDRIETRALQDLDAAHHLHPFNDNAALAQKGTRILTRGDGAYVWDADGNKLLDAFAGLWCVNLGYGRKELGQAAARQMEQLAYYNSFFQCTTEPTIRLAAKLAELTPGDLDHAFFTNSGSEANDTILRLVRHFWAVQDQPQKNIFIGRHDGYHGTTMAGASLGGMKGMHRQGGLPIPDIHHIDPPYPFGDGGDLDPEEYGLLAARRLEDKILELGPQRVAAFIGEPIMGAIGVYIPPRSYWPEIERICRRYDVLLVADEVICGFGRTGEWFGAQHFGFQPDVMTIAKGITSGYIPLGAAMFGKRVATVLKEQGGELAHGCTYSGHPVCAAVALENLRLLQDEGIVERARREIAPYLAQRWAELGEHRLVGQARIVGMIGALELVPDKPRRQYFPDRGKVGALCRDHALRRGLILRATNDAMLLSPPLILSRAQVDELFDKAWLALQDTAQALGK
>NZ_CP043500.1|WP_058364165.1|2791977_2793102_-|polyamine-ABC-transporter-substrate-binding-protein
MKLRLLTLSLSAALLASCGGSAGGEGGKPAAGEDQVLNVYNYSDYIAENTVPTFEKASGVTVTYDVFDSDEMVETKLLAGGSGYDVVVRTLNFFGRQIQAGVFLPLDKRQIPNLANLDPEIMRRIAQQDPGNTYGVPYMVGTTGIGYNVDKVKAAFGSTDIANSWDLVFKPENIAKLKDCGVTILDTPSDLIPIALHYQGEDPHTTDTAKIEQAAALIKRIRPYVQNFHSSQYVTSLANGSTCLAVGWSGDIIQARDRAEEAKNGVHVAYSIPREGAPQWFDMLAIPKDAKHPQNAYKFINYLLTPEVAAANSNFIHYANPVPKATPLVDAAIRNDPTIYPPPEVAAKMFTYSINPPEVDKLYTRLWTEIKTGR
>NZ_CP043500.1|WP_003471214.1|2789053_2790256_-|HlyD-family-secretion-protein
MSTHDPDPTQTQRQATSDEARAAPAQDDARQPDEPSPLKNPKVKWTLLLIGLVVLIALLAWLVYYLTTGRYLQETNNAYLQADAVAVAPRVNGYVTGVFVGDNQTVKAGQPLLQIDARSYRATQQQAQAVVAVRQADIAAAEAGLQAQRATLLQARTQITAAAASLRFAQAEAKRFAPLAASGADTHEHYESIVHDRDRAQAQYDAAKAQVVAAESQVQGAGAQLDQARAGLQQAQADADQAQVAMEDTRLTARIDGRIGDKTVQVGQFVAAGTRLMSVVPVDALYLSANFKETQVGLMRPGQPARIEVDALSGVELDGVVESIAPGTGSQFALLPPENATGNFTKVVQRVPVRIRLKAGAEARKVLVPGMSATVTVDTRAAKDAKERVEQEGKQDEGRP
>NZ_CP043500.1|WP_058364162.1|2808944_2809193_-|hypothetical-protein
MSADPALTQALFEALAPEPEGVALARLCKRLGVRMSVPLRTLAWLGEATLDGRAGPGWIRVETRGEREVAVLTAAGRAQLAR
>NZ_CP043500.1|WP_047325041.1|2809182_2811531_-|FdhF/YdeP-family-oxidoreductase
MSKKTIQPYTQPAGGWGALRAVASHLLQQDVAVQGAKTLLHANQPDGFDCPGCAWPDRDHTSTFEFCENGAKAVAAEATARRATPELFAQHSVTQLAKYSDYWLEGQGRLTHPLRYDSASDHYVPVNWDAAFALIATHLNGLASPDEAIFYTSGRTSNEAAFLYQLFVREFGTNNFPDCSNMCHEPSGTALESQIGVGKGTVSLHDFELADAIFIFGQNPGTNHPRMLGELRQAAKRGAAIVSFNPLRERGLEKFADPQDKLQMLHNGSTRISSDYFQLKIGGDLAAVKGIIKHVLERDAEAARAAQPRLLDLQFITQHTANFDAFAAEVIAEPWATIVEESGLSEAELRHAGEIYLKSERLIACWGMGITQHKHSVATIHMIANLLLLRGHLGRPGAGACPVRGHSNVQGDRTMMIYEKPPAAFLDRLQQVFGFEPPRASGFDTVGAIEAMGDGRARTFFGMGGNFATATPDTEATHRALRRCDLTVHVTTKLNRSHLVHGRDALILPCLGRTEIDIQEGGPQSVSVEDSMSMVHLSAGINPPASPELLSEPAIVARLAEATLGTRSAIRWRWLVADYDRIRELIAQVFEDFADFNTRVRVPGGFRLSNTARDRVWDTPEGRAVFKVHAVPTDNPIHRARRQHPQQPVFTLATTRSHDQYNTTIYGLDDRYRGVFGERRVLFINAADIADLGLQPGAWVDLESLGEDGVQRHARRFLLVAYNIPRGCLAAYYPETNGLVPLSSFADEARTPTSKSIPVLVTPHRAEAADAVPRDIGVALVR
>NZ_CP043500.1|WP_047325042.1|2811527_2812367_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MDSRASSRPGAVARGVRRHRDGRTALTQDLVAAEVPVAFAYNGEPFVVMMATPEDLHDFALGFSLSEGIVEEPAQLRIASVDTFLEGVSLQLQIPPAHAAALQARRRNLHGRSGCGVCGSESIEAVLRAPQPLPAGAAIAPAALARALRELRQQQPLNAITGATHAAGWADADGCVQLAREDVGRHNALDKLIGALATVGLDPASGFAVVTSRASYEMAMKAAQAGIPLLAAISAPTALAIALADSAGLTLIGFARDHDYVVYSHPQRLHQAEHAGEPA
>NZ_CP043500.1|WP_058364160.1|2814214_2814733_+|helix-turn-helix-transcriptional-regulator
MYKVTIQPQWELHTEDGQRLPPRLAELLLAIRDTGSLAAACRQTGLSYRYAWGTLREARRLFGQPLLRADVRFIHRQFRSGTRLLLECLVAQQSLPLRGLHGTDMEELTHAAVAAYIASGLADAGFGLEPPALRYGMAFIPIVSERYFLLCRRAALDSGRLPPPDRGFAAQR
>NZ_CP043500.1|WP_003471257.1|2815896_2816367_+|DUF1203-domain-containing-protein
MSSFVCIGLPAAPFAPLFALDDAQLHAHGARRVRADQTPGFPCRISLEDAQPGEELLLLHYLHQPADTPYRAAGPIYVRRHVQTAMVAPGHVPDAIRRRLISLRGYAADDMLLAADVHPGETVAAAIAQAFADPRVRYLHLHNARQGCFACRVERV
>NZ_CP043500.1|WP_058364159.1|2816719_2818222_-|aldehyde-dehydrogenase
MNAPRTRDAWQAMAAALHLRTQAFIDGRYVDAASGKTFDCISPIDGRVLGRVAAGEAEDIARAVAAARRSFDAGHWSQARPAQRKKILIKLAQLVEQHADELALLESLDMGKPVRDARSVDVAATVRCLAWTGEALDKVYGEVAPTGQDELGLITREPLGVVGAIVPWNFPLLMAAWKIAPALAAGNSVVLKPSEKSPLSALRLAELVAEAGIPDGVFNVVPGFGKNAGEPLALHMDVDGLVFTGSTAVGKRLLQCAGLSNMKRAYMECGGKSPNLVFADAPDLEQAAQAAAGAIFYNQGEVCTAASRLLVQRSIKDDFVARVVAAGRALQPRHPFDDDAAMGALVDEAQTHRVLDYIARGNEEGARLLLGGKRVEVVAGGCYVEPTIFDEVGHEHTIAREEIFGPVLSVIAFDDEAHALRMANDSDYGLAAGVWTRDIGRAHRVARKLRAGSVWVNYWDGGDMTAPFGGYKQSGNGRDKSLHAFDKYTEMKATWINLAV
>NZ_CP043500.1|WP_003473023.1|2818310_2818859_-|cupin-domain-containing-protein
MDIGARLHRVRTAHRLSQRELAKRVGVTNSTISLIEQNKVSPSVSSLKKVLDGIPISLADFFTQDLQIGPADAPFYAADELPDVGSDGIHYYLVGQHRPQRQMCILREVMPPGSDTGSAMLVHQGEEGGVVVAGEVEITVGAQVRVLRAGEGYYFESRVPHRFRNVGSEAVVIVSANTPATF
>NZ_CP043500.1|WP_149569811.1|2819201_2820500_+|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MDAFWMPFTANRQFKARPRLLASAEGMYYRSVDGRRILDGTAGLWCCNAGHARPRIVEAVSRQIATLDFAPSFQMGSPLPFVLAERLVELAPPGLDHVFYTNSGSESVDTAMKIALAHHRARGEGQRTRFLGREKGYHGVGFGGISVGGLPNNRKGFGPLLPGVDHLRHTLDLERNAFSQGLPEHGVKLAEDLERLVTLHDASTIAAVIIEPISGSAGVVLPPHGYLQRIRQLCDKHGIVLIFDEVITGFGRVGKAFAAQRFGVTPDLMTTAKGLTNGCVPMGAVFVSRAIHDTFAHGPAGAIDLFHGYTYSGHPLACAAALATLDTYAEEQLFEQAIALGEDWQQAIHALKDLPHVIDIRNFGLIGAIELAPRHGAPGARAYEIFERCFHEGDLLIRVTGDTIALSPPLIVEREHIERIFAVLADMICSTP
>NZ_CP043500.1|WP_058364157.1|2820565_2821678_+|alanine-dehydrogenase
MLVGVPKEIKNHEYRIGLTPAGVRELVLHGHQVLVQRDGGQAIGLTDADYERAGARLADDAASVFAQAEMIVKVKEPQPDECALLRTGQLLFTYLHLAPDPAQANALLQSGCTAIAYETVTDGHGGLPLLAPMSEVAGRMAIQAGAHALEKAQGGCGVLLGGVPGVKPAEVLVIGGGVVGINAARMATGLHARVTVLDRSLERLKYLDELYGHQLTTLYSTRDAIEHCLPHTDLVIGAVLIPGAAAPKLVSRAQLALLRPGSVLVDVAIDQGGCFETSRATTHQQPTYEVDGIVHYCVANMPGGVARTSTFALTNATLPFVLQLAEHGLQALRDDQDLRNGLNVHAGKLTHRAVAQALGAEFVRPLDALG
>NZ_CP043500.1|WP_058359029.1|2821703_2823197_+|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MTDSLSHYIGGRRVDFRNGDYAEVFDPASGAVARRVPLGDAHAVEMAVAAATQAFPAWAATPPLQRARVLFRFRDLLERHADTLARCISAEHGKVVSDARGEVTRGMEVVEFACGMPHLLKGEHSVDVGRGVDSWSEYAPLGVVAGVTPFNFPAMVPLWMLPVALACGNSFVLKPSERAPSASLLLADWLHEAGLPDGVCNVVHGAKTAVDALLAHPQVQALSFVGSTPVAADLYARGAALGKRVQALGGAKNHLVVLPDADLDDVVSALLGAGYGSAGERCMAISVAVCVGDALADALVARLAPRVAALSLGAGADEPDMGPLISAAHRERVRGYIDSGVADGATLVVDGRAAQAAAQAGGFFLGGSLFDHVRADMRIYCEEIFGPVLCVVRVADAEAALQLIDAHDYGNGAAVFTRDGAAARAFARRVQAGMVGINVPIPVPMAFHSFGGWKRSLFGPLHVHGPDGVRFYTRLKTVTARWPAAARDAEFAMPTMR

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Crispr_ID: NZ_CP043500_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043500_5

3839923-3840032

Orphan

Consensus_repeat	Method
GTCGCGGCTGAAGCCGCTCCTACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043500_5

>merge|NZ_CP043500|5|3839923-3840032|CRISPRCasFinder
GTCGCGGCTGAAGCCGCTCCTACAGTGCACACAGCCAGCATCCCGCTAGCCCTTGTAGGAGCGACAGGCACTACCAGCAACGCCTGTCGCGGCTGAAGCTGCTCCTACAG

>NZ_CP043500|5|5|3839923-3840032|CRISPRCasFinder
GTCGCGGCTGAAGCCGCTCCTACAG	TGCACACAGCCAGCATCCCGCTAGCCCTTGTAGGAGCGACAGGCACTACCAGCAACGCCT
GTCGCGGCTGAAGCTGCTCCTACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043500.1\|WP_149569819.1\|3837660_3838410_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377509
NZ_CP043500.1\|WP_058364106.1\|3835994_3837179_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP043500.1\|WP_058364082.1\|3833784_3835998_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003472474.1\|3838647_3839829_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP043500.1\|WP_108085159.1\|3821678_3823172_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP043500.1\|WP_149569820.1\|3840038_3841004_-\|glycosidase-like-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP043500.1\|WP_058364079.1\|3841006_3842521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_108085369.1\|3842468_3844397_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133049
NZ_CP043500.1\|WP_058364076.1\|3852225_3853059_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224137
NZ_CP043500.1\|WP_003472488.1\|3826064_3827081_+\|DUF4434-domain-containing-protein	unknown	unknown	gnl\|CDD\|373094
NZ_CP043500.1\|WP_058364083.1\|3831633_3833778_-\|glycosyl-transferase-family-protein	unknown	unknown	gnl\|CDD\|237974
NZ_CP043500.1\|WP_058364085.1\|3825162_3825678_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|237227
NZ_CP043500.1\|WP_058359122.1\|3844408_3845314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043500.1\|WP_003471496.1\|3845543_3846389_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_CP043500.1\|WP_003466217.1\|3823316_3824978_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP043500.1\|WP_058364078.1\|3846759_3847908_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702
NZ_CP043500.1\|WP_058364084.1\|3828814_3831637_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372547
NZ_CP043500.1\|WP_060744601.1\|3850518_3851070_+\|nicotinamide-mononucleotide-transporter	unknown	unknown	gnl\|CDD\|377432
NZ_CP043500.1\|WP_003472445.1\|3851185_3851923_+\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|132380
NZ_CP043500.1\|WP_058364077.1\|3848061_3850224_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805

Protein	Function_ID	Function_description	E-value
NZ_CP043500.1\|WP_149569819.1\|3837660_3838410_-\|hypothetical-protein	gnl\|CDD\|377509	pfam05420, BCSC_C, Cellulose synthase operon protein C C-terminus (BCSC_C). This family contains the C-terminal regions of several bacterial cellulose synthase operon C (BCSC) proteins. BCSC is involved in cellulose synthesis although the exact function of this protein is unknown.	1.68114e-40
NZ_CP043500.1\|WP_058364106.1\|3835994_3837179_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	1.15852e-155
NZ_CP043500.1\|WP_003472474.1\|3838647_3839829_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP043500.1\|WP_108085159.1\|3821678_3823172_+\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.48663e-35
NZ_CP043500.1\|WP_149569820.1\|3840038_3841004_-\|glycosidase-like-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	2.0733e-67
NZ_CP043500.1\|WP_058364078.1\|3846759_3847908_+\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	5.61267e-22
NZ_CP043500.1\|WP_108085369.1\|3842468_3844397_-\|glycosyltransferase	gnl\|CDD\|133049	cd06427, CESA_like_2, CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of glucan.	1.96557e-161
NZ_CP043500.1\|WP_058364076.1\|3852225_3853059_-\|glycosyltransferase	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	0.000500953
NZ_CP043500.1\|WP_003472488.1\|3826064_3827081_+\|DUF4434-domain-containing-protein	gnl\|CDD\|373094	pfam14488, DUF4434, Domain of unknown function (DUF4434).	3.96328e-22
NZ_CP043500.1\|WP_058364083.1\|3831633_3833778_-\|glycosyl-transferase-family-protein	gnl\|CDD\|237974	PRK15489, nfrB, glycosyl transferase family protein.	0
NZ_CP043500.1\|WP_058364085.1\|3825162_3825678_-\|peptide-deformylase	gnl\|CDD\|237227	PRK12846, PRK12846, peptide deformylase; Reviewed.	2.4292e-80
NZ_CP043500.1\|WP_003471496.1\|3845543_3846389_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	4.3217e-46
NZ_CP043500.1\|WP_003466217.1\|3823316_3824978_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP043500.1\|WP_003472445.1\|3851185_3851923_+\|UTRA-domain-containing-protein	gnl\|CDD\|132380	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii. [Regulatory functions, DNA interactions].	1.52634e-72
NZ_CP043500.1\|WP_058364084.1\|3828814_3831637_-\|hypothetical-protein	gnl\|CDD\|372547	pfam13283, NfrA_C, Bacteriophage N adsorption protein A C-term. The function of this domain is unknown but it is found at the C-terminus of bacteriophage N4 adsorption protein A, in association with an N-terminal region of TPR repeats.	3.96791e-19
NZ_CP043500.1\|WP_060744601.1\|3850518_3851070_+\|nicotinamide-mononucleotide-transporter	gnl\|CDD\|377432	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter. Members of this family are integral membrane proteins that are involved in transport of nicotinamide mononucleotide.	7.97487e-48
NZ_CP043500.1\|WP_058364077.1\|3848061_3850224_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.10796e-123

>NZ_CP043500.1|WP_003472474.1|3838647_3839829_-|nicotinate-phosphoribosyltransferase
MIIDSLLDTDLYKFTMMQAVLHQHPGAQVEYRFKCRTPGIDLAQFLQQISAEIDALCALRFRAEELDYLRGLRFIKPDFADFLGLFHLDRKYLQLQASATVPGEIELSIRGPWLHTILFEVPLLAIVNEVWFRNTGGGDHAEGLRRLQAKIALLRDSSGYGGCAIADYGTRRRYSRAWHGELLPVLQQTLGAQFVGTSNVYFARRYGLTPLGTMAHEYLQAFQALGPRLRDSQAAALESWAREYRGDLGIALSDVVGLDAFLRDFDLYFCKLFDGMRHDSGDPFAWGERVLAHLQRQRVDPRGKVLVFSDGLDIDKVMRLYAHFHGRCMLAFGVGTNLTNDLGPAPLQIVIKMVRCNGQPVAKLSDSPGKNLCDDPAYLAYLRQVFAVAADPG
>NZ_CP043500.1|WP_149569819.1|3837660_3838410_-|hypothetical-protein
MYTHFRTQACSRQWRGFLRALAQEFAEVLAADDLALLMARIGCRFAGTHLIGTCATLDEVQAGVNRVWERMEWGYARFEEQADRVDKNLSGHTYGQGGYFSPQDYVDLGFPVHWSGRSAGRKVNWSVDASVGVQHFRSDDSTYFPTSAQLQQDAYAAASLAALLGLVDSYTAPVYAGQSKTGVSYNLAGAAGWQLAPQLFLGGRLIFNNNNARDYNQFSTNLYVRFVLDRLGAGLGRRRQVLASPYVGE
>NZ_CP043500.1|WP_058364106.1|3835994_3837179_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVLCVFGTRPEAIKMGPLVRALHAAPGIDSQVCITGQHRAMLDQVMALFAIQPDHDLDVMVADQTLNGLSSRLLAKLDALYAQLQPDRVLVHGDTGTAMTAALAAFHRRIPVGHVEAGLRTGNLQQPWPEEMNRRVIDVVADHLFAPTASARDNLQREHLSGRISVTGNTVIDALQLTVGRLERDAVLRATVDAQFPFLDAQRKLLLVTGHRRESFGDGFANICRALAELAQRQDLQIVYPVHLNPNVQGPVHAQLGGLGNVRLIAPQDYLAFVRLMQRAHVVLTDSGGVQEEAPALGRPVLVMREVTERPEAVRAGVVTLVGTDPARIVAAVAAACDLPARPARFLPHASPYGDGRAAARIVAALRGQSFDSFVPGRAAAVSPLPLFSEAMP
>NZ_CP043500.1|WP_058364082.1|3833784_3835998_-|hypothetical-protein
MTHTRRPTARLPQVLPLALVLATALPPAAAADSVAGQFGEWAGTTTVTRSMTLRELGFKQPLVLSGQESQREIYLPVPAGVATHDAQLQVDARYVRGHTGRSASLLSIDGDPVSARSITDAQGDLSQLIGIDGFARPNGFVRFGVGWWSVVSEYRCADQSAPANVLRLSPESRFSYRFDGRAIDTVAKAWGGLPATVRLLVEGRASSVQSYDTAWRVGTALENGGKRVDVVALPAVGAIVDLRGLAIPASLAGIPAYAALSDRSASHRIGSLAEVGALLSLRDGSPLAVDVAVLSDPLRAGVRAALDALGTQVASAAPDAAGAFAAWRKADMAGFEQPVGIASVQVALVGGHPTLLVASGAGAKVAGLLTQQWRAYAQGRALRVSTALLPPADKNVVLLGRLGDLAGTQDIVSRGDRTADLGALSSEGRLPSEVVVDVSAAPNPAGQGAVASIFFNDYLLGAKVLDADGKPQRLVATVPSYALAARNQVRISFLRQPARPYCHDPATGYPVSVLPSSHIRLADRSLAADFVGAASQLAGAHEVFVPSSWLQDAPASLTKVIHLAGATGASPMQAVLKVGAANTAIAPTGPYLSFVLAPQGLAQSGAVRDGKLVVSGPGNQVLLDLAGLDRAALVEVVGSGASTGVIYRELGTQGPQIAEPFRLIRGNLALLDANGVVQDFDGQDPTGARMAEQSNPQPLWQQHMVVLVVLVGVIVFMLLAARVVQIRRRRRAAQNGN
>NZ_CP043500.1|WP_058364083.1|3831633_3833778_-|glycosyl-transferase-family-protein
MDSLYWNIHLANYYAFLETAAVVVAVVILISSLDDLFIDAWYWVRELWRSAILKQRSEYRPLTQQDLLQRPEQTLAIMVPAWAEFDVIGQMVENMIDVLDYHDYMVFVGTYPNDAQTIAEVERMRRRYKRMRRIEVPHDGPTSKADCLNWLVLAIFEYEKQNDITFAGVVLHDSEDVLHPMELRFFNYLLPRKDMIQLPVTSLDREWYELVAGVYMDEFAEWHAKDLVVRESVSGMVPSAGVGTCFSRKALLALSQANDNQPFNPDSLTEDYDVGARLAAMGMHSIFARFPVQFRVRRPSWFGWGPVRERTLHMALCVREYFPDNFRASYRQKARWVLGIGLQSWETLGWRGSLATKYLLARDRKGIVTSFVSVFAYLIFLQLLLFWLLKVAGTWATQFPTIFQRGTWQMNVALLTTAALAMRVAQRFYFVNRLYGWEHALMSIPRMVVGNMINFMATARAWRLYLLHLLFGKRMVWDKTMHDFPSAAQLVHTRRRLGELLTTWEAIEPERLAQALRQQEGGRQQPLGRILVAQGWLGDETLAEAIAFQGDLPRAAIDVAYLQAGQFPLSVQACVQWRLLPLPSDTPGEVAVAVSSALSEDEQARLLHDLDASVLRQAIARESEINAGLRLISGESYRVDAVPLLGDLLVELRLIARDQFERVLLGYRPQRDGRIGDHLVKQGVATQAAIAAAVREQHRRASQPYGGIGGALPT
>NZ_CP043500.1|WP_058364084.1|3828814_3831637_-|hypothetical-protein
MRTRLLSSMIALSLLGLGSATAHAQQLPLAGAAYRIAEDAYASYARGDYPQASRQAAEAARLRPDVVRLRLLQIYALQKLGRGDDARAQARRALADGLQDAALPRLAADANAALATRAGGAPTPRATAHPSAAEQAYRLAFALATEAYDAYNNDRMAEAADKAEQAFRQQPQQGAWAVLWVAALEARQQFEQAEAAAAAAIQLGAPNVADLQAKRVALGRQRAVKPAQQGYQALIEQDFATAAGYARQAVAYAPDVASHRLLLMTAQLLDEQLPAAEATADAALDNDSEDTVALVMRAYLRQRQLHSAQANADFDAALRQDWLDPQQQRNVRLLAVDAAIAAGDRARGARLLQPLHADPLAGADETAREQFGQAIAQREKALRSARPAPSLTLATYPAPFQQCRYTPYGTQCELTPADLQGSGSAAQRAYAAYGRRDYQEAIREAQHALQDNPDNGGVQNLLTTVLAAGDRAQRAQARQRLDSALGQRPTDAGLLMQRGYLQQRAGQPAQALDDFRAAEATGKAPPSVVLDQAYASAANGDNAQAVALLRSAIDRADQGALPLDQAQRYTTRSSIANLWRAWGITAAAGYRGARQAASNLGGTAISTPGDSVFSTLEAFWRPAALNNRHGTLEAYARAANTLYDAGGTFESVRAVDPCTGAATEDARARAERLSRSRSSAGWPSTVGAFGVRYAFGRTGLSAGIERRQFLGSGTRSGGVYPDAAATQCRIQRDSNQPQQLNTLARYRLDGNAGGWLSYLTYGFYHGTGVRTDVNQWWTLSGYAQAGYSWDDNRARFSVDRLDASGAAVETLRDSDGRLHRTQAFAAAELRAGRSYRFGAEQTRWVLNPYLVVATDWLDQRSRVSGIDYPLIGEQAFALSDTQRSWSLGAGPGLGVRYWFREDRYNAARSSLDLSVQYRFAFGGGDPQRAKGLFATATLTY
>NZ_CP043500.1|WP_003472488.1|3826064_3827081_+|DUF4434-domain-containing-protein
MHNDRPGSASFSPSRRDLLRLALLAPAALAVGMLPGCAKPPRFDGSFIQPWRSHLDLSAQDWQQHMALAQRLGCRQIVVQWAGLYGGGGDADWTLPDSTLQLIFSTAAAAGLQVRVGLPYHSGWWKALQAPDPATLDAFLALTLDNARAYLQTAPWSRQANFDGWYLPYELEQFHWAQDVRQQRLCGWLAGLCAAASAGTDKVTAISTYFSRLQTSGALPQLWNRILDQVPLRPMVQDGVGVAGLDNLDGVDPLLAALRARQVAFDVVVELFEELPSSAADGSHFQAQTADAARIQQQLAWAQRSGAAGIFAFALDPWLSQDSPRAQALRRQWRIGRQ
>NZ_CP043500.1|WP_058364085.1|3825162_3825678_-|peptide-deformylase
MIRDIIRMGDQRLLRLAQPVDTFGSAELHALVADMFETMDAARGVGLAAPQIAVDLQLMVFGFDSNARYPDAPPVPRTALANVQIEPLSDELEDGWEGCLSIPGLRAVIPRHRQIRYRGLDPDGTAVVCEAEGFHARVVQHEHDHLIGRLYPSRIRDFGKFGFEDVLSYEL
>NZ_CP043500.1|WP_003466217.1|3823316_3824978_+|energy-dependent-translational-throttle-protein-EttA
MSQYIYTMNGVSKTVPPKRQIIKDISLSFFPGAKIGLLGLNGAGKSTVLKIMAGVDTDFSGEARPQPGIKVGYLAQEPELDPAKTVREAVEEGVGEVLQAQAALDRIYEAYAEEGADFDKLAAEQQRLEAILAAGDAHLLEQQLEVAADALRLPPWDAVIGPLSGGEKRRVALCRLLLQKPDMLLLDEPTNHLDAESVEWLEQFLARYAGTVVAVTHDRYFLDNAAEWILELDRGRGIPWKGNYTDWLMQKEERLKQEDNQEKSRQKAIQKELEWSRQNAKGGRTKGKARLARLEELQSVDYQRRNETNEIFIPPGERLGNAVLEFKHVTKKFGERLLIDDLSFLVPSGAIVGIIGPNGAGKSTLFKMIIGKETPDSGEIVLGPTVKLAYVDQSRDKLEGNHNVFQEVSGGLDILNINGVEIQSRAYLGRFNFKGQDQQKLVGSLSGGERGRLHMAKTLLQGGNVLLLDEPSNDLDIETLRALEDALLEFPGNTFVISHDRWFLDRIATHILAFEGDSHVEFFQGNYREYEIDKRRRMGDDAGPKRLRFKALK
>NZ_CP043500.1|WP_108085159.1|3821678_3823172_+|MFS-transporter
MTTSSAPAATPHPLDRLDRQPPACACPDASPPTLGAWGLAILLLGQMLPLIDFSIINVALGSIAHTLHASATALELIVAVYGVAFAVGLAAGGRLGDNLGRRRVFAAGVLLFAVASLLCGLAGSVAALLAGRVLQGLGAALAVPQILATIHVSLRGAAHARALALYGSLGGIAFVIGQVLGGSLVTADIAGSGWRAIFLINLPLCVLALAGLRAVPETRAARRMPPDLAGAGLLGLFLACLLLPLALGPTLHWSAPCLAVLAATVPLLAALARTEAWQERRGRVPLLPPALLRLPSVRFALLLGGVFFACWSGFMFVLALTLQSGAGLSPLQSGNAFIVLGAAYFCSALLSARGVARFGLLPTLLLGCTVQMLGLLALAWTLHAVWPHPGWRALATATALIGAGQAWIVACFYRIGLSQVATEHAGAGSAMLSTVLQAAMGLGPAALGAVYAHARRGGSLAAMQAALGSEWLAMLLLVACTLMYRQRQRRLVRAAAT
>NZ_CP043500.1|WP_149569820.1|3840038_3841004_-|glycosidase-like-protein
MLVGMLLVLSAGGCGASPPPAAAPTPWMGANVKVSAQAPWGSDAAQRSLQQLADAGAARALLVAFVWQATPQSDDPVLGSDSSAEQVRAGLRQMRAAGLQPVLKVHLWIPGHWAGEAAPADRAAWFGAYQRALLQLAQVAADERTASLIVGTELRGLQDAPQWPALVAAVRQVYRGPLGYVADGLEQAERFGYWDRFDFVGTSLYPALSAAPAQRLTQMRAAAARVQALGTRSGRPVWVAELGLRSARGSLAAPWESPEQRRAAVDTALQAQVLQDWRRVLGEQRIAGIALWCWYTDPDAGGAHDSDFTVQHKPAQAVLAR
>NZ_CP043500.1|WP_058364079.1|3841006_3842521_-|hypothetical-protein
MASASTWPKSAAPHSTTETPRRPRGVAVFVVTAALLALLCQRLLAHGYMSDDAMAQYAKLLLLRDAAGFRTEYLGFLYAQASLYLGLLIGGVPGLSTPLLPYLVDVLAGAALLTLLWRDLAAGLGRAWAWGLCAALVLQPFFLWPTLSGNNQGLGLLVFYLTCRALRHLRGDPEAFAYLRLALCLCLLFFVDERACFLAVAMAPWLGVIAPQGMLRRAPLSFYLVCYLPFLFAVATWMYLNYLFFGDALLFVRDQHSAFRGSYAQAALQPWLQQAMARPWWPPLYLALAGLVTTPLLLLVRRTRLSSTWRCVLVATVTVIGAGTLAAWARFSAQPLDFLALMVVPAALLLGDLRRELRWPALALLLLGAVASGWVIAQTAASTTRDWAAALYAPVAPRHPDEARLGAWLAEARLPTLLDDRAGYAVIVARGDTQGLILPFDPRFKRALDDPRQMPAQVVVADPASQAGVLDSVNRRLPQLWRQGLPGYSLVYRQGSYRVWRRAP
>NZ_CP043500.1|WP_108085369.1|3842468_3844397_-|glycosyltransferase
MSHSTASDNAGEAIGPLGSVPEPRGWQAPIGTALVEGGVIDAAQLQEALALQARWRSRLGDVVLAQRGVTALRFYTVLSAHFGLNFVNLLQQPIHPALFEPERLADYAQRLVLPWRMEEGRLVLAVADPGPETFAWARSVYGADVRFVGTSKFDIVWGLQQQADAQLTHDALNLLAEHAPEHSAKQVVTRKQVVSLCTVALLLLLALLIWPVPVLIAINSVVGIAFVATFALKFALAWLGARRRIEIKVTDAEVAALSDEDLPVYTVLVPMYKEPDVLPILANALRRLDYPTSKLDVKLVLEADDTETIEAAKALGLEAFFEIIRVPPSQPKTKPKACNYALQFARGQMLTIYDAEDKPEPDQLKRAVAAFRKSPADVACIQARLNYYNADENWLTRMFTLEYTLWFDFYLPALETLRIPIPLGGTSNHFRLDILRKVRAWDPYNVTEDADLGVRLTQQGYRVSVVNSTTFEEANVSIPNWIRQRSRWLKGYMQTWLVHMRDPVQLYRSVGFRGFWGFQFFVGGTFFTALIAPPMWLIYGIWALTDTHVFNPFFPPALLYLSMLNLLLGNGFLIYMTLLAAFKRDYFRLAPYALTVPLYWLLQSVAAYKGLWQLIHNPFYWEKTTHGISKHMAEERRAALDD
>NZ_CP043500.1|WP_058359122.1|3844408_3845314_-|hypothetical-protein
MTSTGGARHRPGRRARTLSRLALGLAALAAGPCCAGAWVQDEGAALVILKASHSDGGAVYNSHGQDQNFPDAGRSRQDQLNLYAEYALSADLTLVGNVYFSKAGYRNDSGYGNQHTTGWADQEVGLRYRLGPDGRNGPWHGALQVLALIPGYSRQDADDRNRPALGQGDDGAELRYSLGRGYRAGGLDGYVDLGAAVRLRGGDSADEARLDISSGLALAPRWMLIGELNVIQSLGNGNGPNPVYAPGTPIRGNNYDLTKLQASLLHTLPGGTQLQLGYQQPVAGRNTGGAGGPFVAAWWRF
>NZ_CP043500.1|WP_003471496.1|3845543_3846389_-|glycosyltransferase-family-2-protein
MSEQQMAVVVVTYESGSTIDACLQRLRTAADVAQIRVVDNASRDDTLAIVQRHALEDRRVRFVANPDNPGFASACNQGAAASDAPWLAFVNPDLMVEADTLALLRAQVAALGDALLGVEQVDEHGRADAAVRRRDPDFAAMLRHPLAGSRLALAVDPAQPLQRVDAISGALMLLPRALFDRIGGWDAGYRLHAEDLDLCRRARQAGATVAVCNRLRVLHVRGVSSRKRPWFVEWHKHRGLWRYFRKFEAPARSAPVRAAVWAVIWLHAWVTFARLCWRRPG
>NZ_CP043500.1|WP_058364078.1|3846759_3847908_+|phosphotransferase
MSAHQMHGMSLAPAAADWPPLRADEVDALLRRMALPDAVRALRWHSPRPFSAAAEVDSAAGTLFVKRHHRRLRDARTLGEEHRFIEHLRTRGVPVPELLRTPDGASAVELGDWTYEVQRAATGEDLYRDTASWLPFAGTEHAQAAGRALALLHRGAAGYSAPPRSTALLVANLRLFGHADPLQAVQQDLHGRPALAAWLQRRDWRGDLRRHLLPWHARAWPLLRSPAPPLWTHGDWHASNLLWRGHGAASTVSAVFDFGLADRSFALFDLATAIERNLVPWLQLDAGGRAPAELDQLDTLLHGYAQVLPLDAAQLRLLAALLPIAHTDFALSEIDYFAGITGSEANADIAYRRYLLGHADWFGGDEGQRLLQQLQRHADAVR
>NZ_CP043500.1|WP_058364077.1|3848061_3850224_+|TonB-dependent-siderophore-receptor
MPHPFPALAPLALALALAATAAPARANAADPQTPVELDAVNVQGEQPRHRSALGGYGDAALLDTSASIEVIDRAQLDDRQVRVLSEVLRADAAVGDSYAPIGYYENFVVRGYSLNAANSYRINGLTVTGEQNVALENKQQVQVLKGLSGLQSGLTEPAGVIDYITKRPQQVRTLVLGTDDDGGRYAALDLGDWFGRERQFGLRVNAAHEDIRSYVAHADGRRNFLSLAADWNIDAQSSLQLDVEDQDRQQRSVPGYQLLGGERVPGDVSVHRLLAYQPWSRPVGIDALNAQLRYQYRFNDAWRAQLAAAHSRAVIDDYSSFAWGCYGAASCASDAIPNHFSREGDYDLYDYRSPDDTRRNDQVQASVSGTFATGALQHQLNAGLDELHRTIDQHGAINALIGSGNIAADPPLLAQADAELGPRRRRLDSTQQSLLVSDRIGIGEAWQLLLGARQVRYDERAWDRNGALARHTRRSELMPQAALLFKPHDTLSLYASFAKGLAPGGTASWFASNADAILAPTSAYQTEAGLKYERDGLALGAAVFDMRQAYQYAQPQADGSFLYLQQGRLHNRGIELSADGTVGARLHLQASVAGLRARAEDTGTPAYKGHQALNVPRLRASAQASWDVPGASGLALLGGAQYSGAKYADRSGRVAVGGYTVYNVGARYATRLGTLPTTLRLSVDNLTDKRYWRDVGEYLGDDYLFLGAPRTARLALQFDF
>NZ_CP043500.1|WP_060744601.1|3850518_3851070_+|nicotinamide-mononucleotide-transporter
MLVNILGVWLTARRVRWCWPVNVVAVLLYAWLFYQWKLYSDMLLQGVYVVLQGYGWWRWSQGRLDHGKVQVGPLPRREGVLSLLAGTAGALSLGWLMHRHTDAALPWLDAALSAFSLVASVWAARKRIANWTLWIVLDSLYVGVFVYKGLYPTAALYAGFVLLAIYGLRLWQAEQRGVAVAAP
>NZ_CP043500.1|WP_003472445.1|3851185_3851923_+|UTRA-domain-containing-protein
MPTPLNPATGFGQRIVDALLARIVGGEWAADQRLPVERELATLFGCTRITLREALQQLESEGYLYRENRRGWFVSAPRVRHDPTSIAGFMQYVAAQGGTPRTELLSARRQPAGATLARQLELDEAGAEVFVLQRRRWIGRRAVLLETNAILAAWAPTLLDHDLAGSLSTVLGQRLGLHLARSRLSMYPATLVAEQAALLQSTAGTPCFRLQRVSYAADGRAVEFDSESWRHDVLEVTVEVQAPPQ
>NZ_CP043500.1|WP_058364076.1|3852225_3853059_-|glycosyltransferase
MTLPIVLLPIGVDDVALDACLGALEAQTPAGTRVWLADDAQAGPRGIRVIEAWLARTRLQADYTRRPRMLGEVAHLDEMLRACGAADVVVLAADAQPLPGWLQHLSACLARDAAIASATPWSNAGEACAWPRLGEINPLPDDGERLARACAALPPEHPELPSAVCHAVALRGAARQRAGGLDASSYGSWYAALIDLSLRMAGLGWRNVLCETAHVGCSGEGRAADGDMDALATRWPAWHARLAGFLMHDPLHARREQLQRLYADLPPPDPQRALFDA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP043500.1	2805397-2805421	0	1.0
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP043500.1	2805829-2805853	0	1.0
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP043500.1	2805973-2805997	0	1.0
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP043500.1	2806261-2806285	0	1.0
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP043500.1	2805397-2805421	0	1.0
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP043500.1	2805829-2805853	0	1.0
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP043500.1	2805973-2805997	0	1.0
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP043500.1	2806261-2806285	0	1.0
NZ_CP043500_4	4.2\|2806741\|25\|NZ_CP043500\|CRISPRCasFinder	2806741-2806765	25	NZ_CP043500.1	2806453-2806477	1	0.96
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP043500.1	2805541-2805565	1	0.96
NZ_CP043500_4	4.5\|2806885\|25\|NZ_CP043500\|CRISPRCasFinder	2806885-2806909	25	NZ_CP043500.1	2805877-2805901	1	0.96
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805397-2805421	1	0.96
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805829-2805853	1	0.96
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805973-2805997	1	0.96
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2806261-2806285	1	0.96
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP043500.1	2805541-2805565	1	0.96
NZ_CP043500_4	4.1\|2806693\|25\|NZ_CP043500\|CRISPRCasFinder	2806693-2806717	25	NZ_CP043500.1	2806549-2806573	2	0.92
NZ_CP043500_4	4.6\|2806933\|25\|NZ_CP043500\|CRISPRCasFinder	2806933-2806957	25	NZ_CP043500.1	2805925-2805949	2	0.92
NZ_CP043500_4	4.6\|2806933\|25\|NZ_CP043500\|CRISPRCasFinder	2806933-2806957	25	NZ_CP043500.1	2806069-2806093	2	0.92
NZ_CP043500_4	4.6\|2806933\|25\|NZ_CP043500\|CRISPRCasFinder	2806933-2806957	25	NZ_CP043500.1	2806213-2806237	2	0.92
NZ_CP043500_4	4.7\|2806981\|25\|NZ_CP043500\|CRISPRCasFinder	2806981-2807005	25	NZ_CP043500.1	2804965-2804989	2	0.92
NZ_CP043500_4	4.7\|2806981\|25\|NZ_CP043500\|CRISPRCasFinder	2806981-2807005	25	NZ_CP043500.1	2805109-2805133	2	0.92
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP043500.1	2805205-2805229	2	0.92
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP043500.1	2805493-2805517	2	0.92
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP043500.1	2805637-2805661	2	0.92
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805253-2805277	2	0.92
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805541-2805565	2	0.92
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_CP043500.1	2805685-2805709	2	0.92

1. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805397-2805421, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

2. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805829-2805853, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

3. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805973-2805997, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

4. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806261-2806285, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

5. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805397-2805421, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

6. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805829-2805853, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

7. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805973-2805997, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

8. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806261-2806285, mismatch: 0, identity: 1.0

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
*************************

9. spacer 4.2|2806741|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806453-2806477, mismatch: 1, identity: 0.96

cgaactttcgctgccagcggtctgc	CRISPR spacer
cgaactgtcgctgccagcggtctgc	Protospacer
****** ******************

10. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805541-2805565, mismatch: 1, identity: 0.96

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcagtctgc	Protospacer
******************.******

11. spacer 4.5|2806885|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805877-2805901, mismatch: 1, identity: 0.96

cgagctgtcgctgcccgaggtttgc	CRISPR spacer
cgaactgtcgctgcccgaggtttgc	Protospacer
***.*********************

12. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805397-2805421, mismatch: 1, identity: 0.96

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
***************.*********

13. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805829-2805853, mismatch: 1, identity: 0.96

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
***************.*********

14. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805973-2805997, mismatch: 1, identity: 0.96

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
***************.*********

15. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806261-2806285, mismatch: 1, identity: 0.96

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcggtctgc	Protospacer
***************.*********

16. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805541-2805565, mismatch: 1, identity: 0.96

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcagtctgc	Protospacer
******************.******

17. spacer 4.1|2806693|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806549-2806573, mismatch: 2, identity: 0.92

cgagctgtcttgctgggcggtctgc	CRISPR spacer
cgaactgtcttgttgggcggtctgc	Protospacer
***.********.************

18. spacer 4.6|2806933|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805925-2805949, mismatch: 2, identity: 0.92

cgtgctgtccgcaccggcagtgccg	CRISPR spacer
cgtgctgtccgcacccgccgtgccg	Protospacer
*************** ** ******

19. spacer 4.6|2806933|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806069-2806093, mismatch: 2, identity: 0.92

cgtgctgtccgcaccggcagtgccg	CRISPR spacer
cgtgctgtccgcacccgccgtgccg	Protospacer
*************** ** ******

20. spacer 4.6|2806933|25|NZ_CP043500|CRISPRCasFinder matches to position: 2806213-2806237, mismatch: 2, identity: 0.92

cgtgctgtccgcaccggcagtgccg	CRISPR spacer
cgtgctgtccgcacccgccgtgccg	Protospacer
*************** ** ******

21. spacer 4.7|2806981|25|NZ_CP043500|CRISPRCasFinder matches to position: 2804965-2804989, mismatch: 2, identity: 0.92

gtcgctgccttgccgcgccgtctgc	CRISPR spacer
gtcgctgccctgccgtgccgtctgc	Protospacer
*********.*****.*********

22. spacer 4.7|2806981|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805109-2805133, mismatch: 2, identity: 0.92

gtcgctgccttgccgcgccgtctgc	CRISPR spacer
gtcgctgccctgccgtgccgtctgc	Protospacer
*********.*****.*********

23. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805205-2805229, mismatch: 2, identity: 0.92

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggtgctgtccgcgcccgccgtgccg	Protospacer
********* **.************

24. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805493-2805517, mismatch: 2, identity: 0.92

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggtgctgtccgcacccgcggtgccg	Protospacer
********* ******** ******

25. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805637-2805661, mismatch: 2, identity: 0.92

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggtgctgtccgcgcccgccgtgccg	Protospacer
********* **.************

26. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805253-2805277, mismatch: 2, identity: 0.92

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgccttcgcgtgcggtctgc	Protospacer
*********.*.*************

27. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805541-2805565, mismatch: 2, identity: 0.92

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgcccttgcgcgcagtctgc	Protospacer
***************.**.******

28. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to position: 2805685-2805709, mismatch: 2, identity: 0.92

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
gtcgctgccttcgcgtgcggtctgc	Protospacer
*********.*.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043500_1	1.3\|526393\|33\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526393-526425	33	NZ_CP018474	Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence	14085-14117	0	1.0
NZ_CP043500_1	1.3\|526393\|33\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526393-526425	33	NZ_CP018730	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence	20164-20196	0	1.0
NZ_CP043500_1	1.3\|526393\|33\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526393-526425	33	NZ_CP018734	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence	16423-16455	1	0.97
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	57894-57928	1	0.971
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_LN811400	Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence	3969-4003	1	0.971
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_CP017318	Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence	32119-32153	1	0.971
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	AP019683	Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome	7886-7920	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP018469	Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence	27732-27766	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP018474	Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence	22054-22088	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NC_022539	Xanthomonas citri pv. fuscans plasmid pla, complete sequence	30008-30042	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	CP020972	Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence	11327-11361	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	CP020972	Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence	71598-71632	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP017325	Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence	2703-2737	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020984	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence	50640-50674	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020986	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence	12068-12102	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP011166	Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence	17241-17275	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP034656	Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence	34565-34599	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021008	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence	6716-6750	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021008	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence	52359-52393	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020993	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pA, complete sequence	29378-29412	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020968	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence	17554-17588	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	CP030168	Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence	58139-58173	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021019	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence	38557-38591	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021017	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence	31875-31909	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020982	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence	40703-40737	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP017318	Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence	38379-38413	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP012061	Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence	49732-49766	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020990	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence	17-51	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020990	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence	57078-57112	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	45178-45212	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020999	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence	577-611	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020999	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence	42317-42351	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021002	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence	8446-8480	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	2769-2803	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	63672-63706	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP018730	Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence	12193-12227	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	CP021013	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence	35353-35387	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020980	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence	29682-29716	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP012058	Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence	49733-49767	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP012064	Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence	49734-49768	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP012049	Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence	49734-49768	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020988	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence	2777-2811	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP020988	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence	59845-59879	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP018727	Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence	30890-30924	1	0.971
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP018734	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence	24427-24461	1	0.971
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_CP019227	Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence	40816-40850	2	0.943
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_KR071788	Xanthomonas oryzae pv. oryzicola strain GX01 plasmid pXOCgx01, complete sequence	2353-2387	2	0.943
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_CP011963	Xanthomonas oryzae pv. oryzicola strain CFBP2286 plasmid, complete sequence	30293-30327	2	0.943
NZ_CP043500_1	1.19\|527439\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527439-527473	35	NZ_CP018734	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence	18131-18165	2	0.943
NZ_CP043500_1	1.20\|527505\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527505-527539	35	NZ_CP021002	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence	52749-52783	2	0.943
NZ_CP043500_1	1.21\|527571\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527571-527605	35	NZ_CP046571	Xanthomonas albilineans strain Xa-FJ1 plasmid pXaFJ1, complete sequence	25044-25078	2	0.943
NZ_CP043500_1	1.3\|526393\|33\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526393-526425	33	NZ_LN811400	Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence	2247-2279	3	0.909
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	657246-657270	3	0.88
NZ_CP043500_4	4.4\|2806837\|25\|NZ_CP043500\|CRISPRCasFinder	2806837-2806861	25	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	254925-254949	3	0.88
NZ_CP043500_4	4.6\|2806933\|25\|NZ_CP043500\|CRISPRCasFinder	2806933-2806957	25	NZ_MF600313	Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence	177661-177685	3	0.88
NZ_CP043500_4	4.7\|2806981\|25\|NZ_CP043500\|CRISPRCasFinder	2806981-2807005	25	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	538835-538859	3	0.88
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	190158-190182	3	0.88
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	219490-219514	3	0.88
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1449206-1449230	3	0.88
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	166525-166549	3	0.88
NZ_CP043500_4	4.11\|2807173\|25\|NZ_CP043500\|CRISPRCasFinder	2807173-2807197	25	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	183251-183275	3	0.88
NZ_CP043500_4	4.11\|2807173\|25\|NZ_CP043500\|CRISPRCasFinder	2807173-2807197	25	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	61740-61764	3	0.88
NZ_CP043500_4	4.11\|2807173\|25\|NZ_CP043500\|CRISPRCasFinder	2807173-2807197	25	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	112952-112976	3	0.88
NZ_CP043500_4	4.12\|2807221\|25\|NZ_CP043500\|CRISPRCasFinder	2807221-2807245	25	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1481506-1481530	3	0.88
NZ_CP043500_4	4.12\|2807221\|25\|NZ_CP043500\|CRISPRCasFinder	2807221-2807245	25	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	331761-331785	3	0.88
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	657246-657270	3	0.88
NZ_CP043500_4	4.13\|2807269\|25\|NZ_CP043500\|CRISPRCasFinder	2807269-2807293	25	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	254925-254949	3	0.88
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP020884	Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence	19107-19141	4	0.886
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP023161	Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed2, complete sequence	44982-45016	4	0.886
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP052868	Burkholderia glumae strain HN1 plasmid pBGHN1-3, complete sequence	7250-7284	4	0.886
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP017023	Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence	57040-57074	4	0.886
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP020891	Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence	37650-37684	4	0.886
NZ_CP043500_4	4.7\|2806981\|25\|NZ_CP043500\|CRISPRCasFinder	2806981-2807005	25	NZ_CP016288	Rhizobium leguminosarum strain Vaf10 plasmid unnamed7, complete sequence	127228-127252	4	0.84
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP051294	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence	352481-352505	4	0.84
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP033363	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence	352468-352492	4	0.84
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP054029	Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence	328408-328432	4	0.84
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	NZ_LT969519	Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1	534373-534397	4	0.84
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	AF018286	Xanthomonas campestris phage phi-Lf protein VI (VI) and protein I (I) genes, complete cds	1300-1324	4	0.84
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	MH206184	Xanthomonas phage phiLf UK variant, complete genome	4115-4139	4	0.84
NZ_CP043500_4	4.10\|2807125\|25\|NZ_CP043500\|CRISPRCasFinder	2807125-2807149	25	MN263053	UNVERIFIED: Xanthomonas phage phiLF, complete genome	5536-5560	4	0.84
NZ_CP043500_4	4.16\|2807413\|25\|NZ_CP043500\|CRISPRCasFinder	2807413-2807437	25	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1486914-1486938	4	0.84
NZ_CP043500_4	4.16\|2807413\|25\|NZ_CP043500\|CRISPRCasFinder	2807413-2807437	25	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	197123-197147	4	0.84
NZ_CP043500_4	4.19\|2807605\|25\|NZ_CP043500\|CRISPRCasFinder	2807605-2807629	25	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	244246-244270	4	0.84
NZ_CP043500_1	1.10\|526850\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526850-526884	35	NZ_CP018734	Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence	9910-9944	5	0.857
NZ_CP043500_4	4.5\|2806885\|25\|NZ_CP043500\|CRISPRCasFinder	2806885-2806909	25	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	332486-332510	5	0.8
NZ_CP043500_4	4.6\|2806933\|25\|NZ_CP043500\|CRISPRCasFinder	2806933-2806957	25	NC_007491	Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence	152772-152796	5	0.8
NZ_CP043500_4	4.9\|2807077\|25\|NZ_CP043500\|CRISPRCasFinder	2807077-2807101	25	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	134574-134598	5	0.8
NZ_CP043500_4	4.16\|2807413\|25\|NZ_CP043500\|CRISPRCasFinder	2807413-2807437	25	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	115938-115962	5	0.8
NZ_CP043500_4	4.16\|2807413\|25\|NZ_CP043500\|CRISPRCasFinder	2807413-2807437	25	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	599166-599190	5	0.8
NZ_CP043500_4	4.16\|2807413\|25\|NZ_CP043500\|CRISPRCasFinder	2807413-2807437	25	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	680674-680698	5	0.8
NZ_CP043500_1	1.39\|528765\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528765-528799	35	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	38888-38922	7	0.8
NZ_CP043500_1	1.40\|528831\|34\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528831-528864	34	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1232649-1232682	7	0.794
NZ_CP043500_1	1.8\|526717\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526717-526751	35	NZ_CP016618	Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence	359361-359395	8	0.771
NZ_CP043500_1	1.9\|526783\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526783-526818	36	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	487995-488030	8	0.778
NZ_CP043500_1	1.9\|526783\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526783-526818	36	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	488003-488038	8	0.778
NZ_CP043500_1	1.9\|526783\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526783-526818	36	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	750808-750843	8	0.778
NZ_CP043500_1	1.27\|527969\|34\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	527969-528002	34	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	962451-962484	8	0.765
NZ_CP043500_1	1.29\|528100\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528100-528134	35	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	460708-460742	8	0.771
NZ_CP043500_1	1.30\|528166\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528166-528201	36	NZ_CP022209	Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence	28375-28410	8	0.778
NZ_CP043500_1	1.30\|528166\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528166-528201	36	NZ_CP009321	Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence	95508-95543	8	0.778
NZ_CP043500_1	1.30\|528166\|36\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528166-528201	36	NZ_CP022007	Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence	25408-25443	8	0.778
NZ_CP043500_1	1.36\|528566\|34\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528566-528599	34	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	98717-98750	9	0.735
NZ_CP043500_1	1.39\|528765\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528765-528799	35	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	279668-279702	9	0.743
NZ_CP043500_1	1.39\|528765\|35\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528765-528799	35	NZ_CP025547	Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence	288641-288675	9	0.743
NZ_CP043500_1	1.12\|526982\|34\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	526982-527015	34	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	269986-270019	10	0.706
NZ_CP043500_1	1.40\|528831\|34\|NZ_CP043500\|CRISPRCasFinder,CRT,PILER-CR	528831-528864	34	MN103533	Mycobacterium phage Weirdo19, complete genome	25200-25233	11	0.676

1. spacer 1.3|526393|33|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018474 (Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence) position: , mismatch: 0, identity: 1.0

tttatttggcaggccaaccagtcaacctacggt	CRISPR spacer
tttatttggcaggccaaccagtcaacctacggt	Protospacer
*********************************

2. spacer 1.3|526393|33|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018730 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttatttggcaggccaaccagtcaacctacggt	CRISPR spacer
tttatttggcaggccaaccagtcaacctacggt	Protospacer
*********************************

3. spacer 1.3|526393|33|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 1, identity: 0.97

tttatttggcaggccaaccagtcaacctacggt	CRISPR spacer
tttatttggcaggccaaccagtcaacctactgt	Protospacer
****************************** **

4. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggca	Protospacer
 **********************************

5. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN811400 (Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence) position: , mismatch: 1, identity: 0.971

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggca	Protospacer
 **********************************

6. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017318 (Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggca	Protospacer
 **********************************

7. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to AP019683 (Xanthomonas campestris pv. campestris MAFF106712 pXcc1 plasmid DNA, complete genome) position: , mismatch: 1, identity: 0.971

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggca	Protospacer
 **********************************

8. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018469 (Xanthomonas vesicatoria strain LM159 plasmid pLM159.3, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

9. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018474 (Xanthomonas perforans strain LH3 plasmid pLH3.3, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

10. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NC_022539 (Xanthomonas citri pv. fuscans plasmid pla, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

11. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

12. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to CP020972 (Xanthomonas axonopodis pv. phaseoli strain CFBP6546R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

13. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017325 (Xanthomonas campestris pv. campestris str. CN15 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

14. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020984 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6990 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

15. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020986 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6992 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

16. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011166 (Xanthomonas citri pv. aurantifolii strain FDC 1609 plasmid pXfc46, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

17. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034656 (Xanthomonas campestris pv. musacearum NCPPB 4379 plasmid pXCM49, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

18. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021008 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

19. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021008 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6975 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

20. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020993 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

21. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020968 (Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

22. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to CP030168 (Xanthomonas citri pv. punicae strain LMG7504 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

23. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021019 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6167 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

24. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021017 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

25. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020982 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6989 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

26. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017318 (Xanthomonas campestris pv. campestris str. CN14 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

27. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012061 (Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

28. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020990 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

29. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020990 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6996R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

30. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

31. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020999 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

32. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020999 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6165 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

33. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021002 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

34. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

35. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

36. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018730 (Xanthomonas gardneri strain JS749-3 plasmid pJS749-3.2, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

37. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to CP021013 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP7767 plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

38. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020980 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6988R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

39. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012058 (Xanthomonas phaseoli pv. phaseoli strain ISO98C12 plasmid pXap59, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

40. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012064 (Xanthomonas phaseoli pv. phaseoli strain ISO18C8 plasmid pXap59, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

41. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012049 (Xanthomonas phaseoli pv. phaseoli strain ISO18C2 plasmid pXap59, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

42. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020988 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

43. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020988 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R plasmid pA, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

44. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018727 (Xanthomonas vesicatoria ATCC 35937 strain LMG911 plasmid pLMG911.2, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

45. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 1, identity: 0.971

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
gcccgccgctttcagggcaccgtggaagccatcga	Protospacer
*************** *******************

46. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019227 (Xanthomonas oryzae pv. oryzae strain IX-280 plasmid pXOO43, complete sequence) position: , mismatch: 2, identity: 0.943

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggcg	Protospacer
 *********************************.

47. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KR071788 (Xanthomonas oryzae pv. oryzicola strain GX01 plasmid pXOCgx01, complete sequence) position: , mismatch: 2, identity: 0.943

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggcg	Protospacer
 *********************************.

48. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011963 (Xanthomonas oryzae pv. oryzicola strain CFBP2286 plasmid, complete sequence) position: , mismatch: 2, identity: 0.943

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcacggcg	Protospacer
 *********************************.

49. spacer 1.19|527439|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 2, identity: 0.943

cgctgatggacttacagcagcgtgcaagcacggca	CRISPR spacer
agctgatggacttacagcagcgtgcaagcaccgca	Protospacer
 ****************************** ***

50. spacer 1.20|527505|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021002 (Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166 plasmid pA, complete sequence) position: , mismatch: 2, identity: 0.943

gcccgccgctttcagtgcaccgtggaagccatcga	CRISPR spacer
ccccgccgctttcagggcaccgtggaagccatcga	Protospacer
 ************** *******************

51. spacer 1.21|527571|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046571 (Xanthomonas albilineans strain Xa-FJ1 plasmid pXaFJ1, complete sequence) position: , mismatch: 2, identity: 0.943

ctcgaatcctcatcttcgggggtcatgtggaaatt	CRISPR spacer
ctcgaatcctcgtcttcgggtgtcatgtggaaatt	Protospacer
***********.******** **************

52. spacer 1.3|526393|33|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN811400 (Xanthomonas campestris pv. campestris isolate B-1459 plasmid I, complete sequence) position: , mismatch: 3, identity: 0.909

tttatttggcaggccaaccagtcaacctacggt	CRISPR spacer
cttaattggcaggccaaccagtcaacctatggt	Protospacer
.*** ************************.***

53. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
atcgcagcccttgcgcgcgctctgc	Protospacer
.**** ************* *****

54. spacer 4.4|2806837|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 3, identity: 0.88

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gccgctgcccttccgcgcggtcggc	Protospacer
*.********** ********* **

55. spacer 4.6|2806933|25|NZ_CP043500|CRISPRCasFinder matches to NZ_MF600313 (Mycolicibacterium sp. CBMA 213 plasmid pCBMA213_1, complete sequence) position: , mismatch: 3, identity: 0.88

cgtgctgtccgcaccggcagtgccg	CRISPR spacer
agagctgtccgcaccggcagtggcg	Protospacer
 * ******************* **

56. spacer 4.7|2806981|25|NZ_CP043500|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgccttgccgcgccgtctgc	CRISPR spacer
ctcgcggccttgccgcgccgcctgc	Protospacer
 **** **************.****

57. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 3, identity: 0.88

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
cgtgctgtcggaacccgacgtgccg	Protospacer
 ********** ***** *******

58. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
cgtgctgtcggcttccgccgtgccg	Protospacer
 *********** .***********

59. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggcgctgccggcacccgccgtgccc	Protospacer
**.****.****************

60. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 3, identity: 0.88

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
cgtgctgtcggcttccgccgtgccg	Protospacer
 *********** .***********

61. spacer 4.11|2807173|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 3, identity: 0.88

ggaactctcgctgccggcggtttgg	CRISPR spacer
ggaactcgcgctgccgggggtttcg	Protospacer
******* ********* ***** *

62. spacer 4.11|2807173|25|NZ_CP043500|CRISPRCasFinder matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 3, identity: 0.88

ggaactctcgctgccggcggtttgg	CRISPR spacer
ggaactcgcgctgccgggggtttcg	Protospacer
******* ********* ***** *

63. spacer 4.11|2807173|25|NZ_CP043500|CRISPRCasFinder matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 3, identity: 0.88

ggaactctcgctgccggcggtttgg	CRISPR spacer
ggaactcgcgctgccgggggtttcg	Protospacer
******* ********* ***** *

64. spacer 4.12|2807221|25|NZ_CP043500|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.88

cgcgctgtccgacccggccgtaccg	CRISPR spacer
cacgctctccgacccggccgtcccg	Protospacer
*.**** ************** ***

65. spacer 4.12|2807221|25|NZ_CP043500|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.88

cgcgctgtccgacccggccgtaccg	CRISPR spacer
cacgctctccgacccggccgtcccg	Protospacer
*.**** ************** ***

66. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
atcgcagcccttgcgcgcgctctgc	Protospacer
.**** ************* *****

67. spacer 4.13|2807269|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 3, identity: 0.88

gtcgctgcccttgcgcgcggtctgc	CRISPR spacer
gccgctgcccttccgcgcggtcggc	Protospacer
*.********** ********* **

68. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020884 (Xanthomonas citri pv. citri strain TX160042 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.886

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgagtttggt	Protospacer
***** *************************...*

69. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023161 (Xanthomonas citri pv. malvacearum strain MS14003 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.886

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgagtttggt	Protospacer
***** *************************...*

70. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052868 (Burkholderia glumae strain HN1 plasmid pBGHN1-3, complete sequence) position: , mismatch: 4, identity: 0.886

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgagtttggt	Protospacer
***** *************************...*

71. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017023 (Xanthomonas citri pv. malvacearum strain MSCT plasmid pMSCT60kb, complete sequence) position: , mismatch: 4, identity: 0.886

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgagtttggt	Protospacer
***** *************************...*

72. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020891 (Xanthomonas citri pv. citri strain TX160197 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.886

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgagtttggt	Protospacer
***** *************************...*

73. spacer 4.7|2806981|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP016288 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed7, complete sequence) position: , mismatch: 4, identity: 0.84

gtcgctgccttgccgcgccgtctgc	CRISPR spacer
cccgctgctttgccgtgccgtctgc	Protospacer
 .******.******.*********

74. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP051294 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggtgctgtcggcacccgcctcaacg	Protospacer
******************* .. **

75. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP033363 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggtgctgtcggcacccgcctcaacg	Protospacer
******************* .. **

76. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP054029 (Rhizobium sp. JKLM19E plasmid pPR19E02, complete sequence) position: , mismatch: 4, identity: 0.84

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
attgctgtcgccgcccgccgtgccg	Protospacer
. ******** *.************

77. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to NZ_LT969519 (Pseudomonas aeruginosa isolate RW109 genome assembly, plasmid: RW109 plasmid 1) position: , mismatch: 4, identity: 0.84

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
cgcgcttcgcttgcgtgcggtctgc	Protospacer
  **** * ****************

78. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to AF018286 (Xanthomonas campestris phage phi-Lf protein VI (VI) and protein I (I) genes, complete cds) position: , mismatch: 4, identity: 0.84

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
agcgctgctcttgcgtgaggtctgc	Protospacer
. ******.******** *******

79. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to MH206184 (Xanthomonas phage phiLf UK variant, complete genome) position: , mismatch: 4, identity: 0.84

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
agcgctgctcttgcgtgaggtctgc	Protospacer
. ******.******** *******

80. spacer 4.10|2807125|25|NZ_CP043500|CRISPRCasFinder matches to MN263053 (UNVERIFIED: Xanthomonas phage phiLF, complete genome) position: , mismatch: 4, identity: 0.84

gtcgctgcccttgcgtgcggtctgc	CRISPR spacer
agcgctgctcttgcgtgaggtctgc	Protospacer
. ******.******** *******

81. spacer 4.16|2807413|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

acggctgccttcctgcgccgtctgc	CRISPR spacer
cgggctgccttcctgcgccgtctcg	Protospacer
  *********************

82. spacer 4.16|2807413|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.84

acggctgccttcctgcgccgtctgc	CRISPR spacer
caggctgcctgcctgcgccgtcagc	Protospacer
  ******** *********** **

83. spacer 4.19|2807605|25|NZ_CP043500|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 4, identity: 0.84

ccggctatggtcggcgcctgtgagt	CRISPR spacer
ccggctatggtcggcgcctgcgcca	Protospacer
********************.*

84. spacer 1.10|526850|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018734 (Xanthomonas gardneri strain ICMP 7383 plasmid pICMP7383.3, complete sequence) position: , mismatch: 5, identity: 0.857

gggcggcggttgttgcacgccacagcgagttcaat	CRISPR spacer
gggcgtcggttgttgcacgccacagcgaattcggc	Protospacer
***** **********************.***...

85. spacer 4.5|2806885|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

cgagctgtcgctgcccgaggtttgc	CRISPR spacer
cgggctgtcgctgcccgaggtgcct	Protospacer
**.****************** . .

86. spacer 4.6|2806933|25|NZ_CP043500|CRISPRCasFinder matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 5, identity: 0.8

cgtgctgtccgcaccggcagtgccg	CRISPR spacer
gaccctgcccgcaccggcagtgccg	Protospacer
 .. ***.*****************

87. spacer 4.9|2807077|25|NZ_CP043500|CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 5, identity: 0.8

ggtgctgtcggcacccgccgtgccg	CRISPR spacer
ggcgctgtcggcacccgccgtcgaa	Protospacer
**.******************   .

88. spacer 4.16|2807413|25|NZ_CP043500|CRISPRCasFinder matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 5, identity: 0.8

acggctgccttcctgcgccgtctgc	CRISPR spacer
atccgcgccttcctgcgccgtctgc	Protospacer
*.   .*******************

89. spacer 4.16|2807413|25|NZ_CP043500|CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 5, identity: 0.8

acggctgccttcctgcgccgtctgc	CRISPR spacer
atccgggccttcctgcgccgtctgc	Protospacer
*.    *******************

90. spacer 4.16|2807413|25|NZ_CP043500|CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 5, identity: 0.8

acggctgccttcctgcgccgtctgc	CRISPR spacer
atccgcgccttcctgcgccgtctgc	Protospacer
*.   .*******************

91. spacer 1.39|528765|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 7, identity: 0.8

tttccggaggcggtgccggtgat--tgttgatgacct	CRISPR spacer
ttgccggaggcggtgccggtgatggtgctgttacc--	Protospacer
** ********************  **.** *. *

92. spacer 1.40|528831|34|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.794

cgcggataaactcgccgcgcatgtccg---gcagatt	CRISPR spacer
tgcggataaaatcgccgcgcaggtccgcgaccag---	Protospacer
.********* ********** *****    ***

93. spacer 1.8|526717|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016618 (Microvirga ossetica strain V5/3m plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

gacagccgcgccgaagcaatctggcggctatccaa	CRISPR spacer
gacctgcggggcgaagcaatctggcggctataccg	Protospacer
***   ** * ******************** * .

94. spacer 1.9|526783|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.778

ctcttccagcaccacgcccgggttgttgtccaggaa	CRISPR spacer
atcttccagcaccacggccgggttcttgccgccgca	Protospacer
 *************** ******* ***.*   * *

95. spacer 1.9|526783|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.778

ctcttccagcaccacgcccgggttgttgtccaggaa	CRISPR spacer
atcttccagcaccacggccgggttcttgccgccgca	Protospacer
 *************** ******* ***.*   * *

96. spacer 1.9|526783|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.778

ctcttccagcaccacgcccgggttgttgtccaggaa	CRISPR spacer
atcttccagcaccacggccgggttcttgccgccgca	Protospacer
 *************** ******* ***.*   * *

97. spacer 1.27|527969|34|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 8, identity: 0.765

tggcatcggccaccgcaaagaaatcg---ccgtgcga	CRISPR spacer
tggcctcggccaccgcaaggaaattgagcccgca---	Protospacer
**** *************.*****.*   ***..

98. spacer 1.29|528100|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 8, identity: 0.771

ctgggcccgacgggcttggtcgtcgaatacgccga	CRISPR spacer
cttcgcccgaggggcttggtcggcgaatactacag	Protospacer
**  ****** *********** *******  *..

99. spacer 1.30|528166|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022209 (Burkholderia gladioli pv. gladioli strain FDAARGOS_188 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

ggccgaggacggctgcgcgccgctgcggtacgccgc	CRISPR spacer
ggccgaggacggctgcgcggccctgctgccgagcgc	Protospacer
******************* * **** *.  . ***

100. spacer 1.30|528166|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009321 (Burkholderia gladioli strain ATCC 10248 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.778

ggccgaggacggctgcgcgccgctgcggtacgccgc	CRISPR spacer
ggccgaggacggctgcgcggccctgctgccgagcgc	Protospacer
******************* * **** *.  . ***

101. spacer 1.30|528166|36|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022007 (Burkholderia gladioli pv. gladioli strain KACC 11889 plasmid pls1, complete sequence) position: , mismatch: 8, identity: 0.778

ggccgaggacggctgcgcgccgctgcggtacgccgc	CRISPR spacer
ggccgaggacggctgcgcggccctgctgccgagcgc	Protospacer
******************* * **** *.  . ***

102. spacer 1.36|528566|34|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.735

cgcgcacgacagaccgccgcgacaaggatcaaca	CRISPR spacer
ccggcaagacagaccgccgcgacgaggacggtcg	Protospacer
*  *** ****************.****. . *.

103. spacer 1.39|528765|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

tttccggaggcggtgccggtgattgttgatgacct	CRISPR spacer
gatccggaggcggtggcggtgattgatggggctcg	Protospacer
  ************* ********* **. * .*

104. spacer 1.39|528765|35|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025547 (Mycobacterium paragordonae strain 49061 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.743

tttccggaggcggtgccggtgattgttgatgacct	CRISPR spacer
gatccggaggcggtggcggtgattgatggggctcg	Protospacer
  ************* ********* **. * .*

105. spacer 1.12|526982|34|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

atgatttcgcacacttcccgcacgtcatcccctg	CRISPR spacer
acccactcccacacttcccgcacgtcgtccggcg	Protospacer
*.   .** *****************.***  .*

106. spacer 1.40|528831|34|NZ_CP043500|CRISPRCasFinder,CRT,PILER-CR matches to MN103533 (Mycobacterium phage Weirdo19, complete genome) position: , mismatch: 11, identity: 0.676

cgcggataaactcgccgcgcatgtccggcagatt	CRISPR spacer
cccggtcaaactcgccgcgcatgtcctttgccac	Protospacer
* *** .*******************  ..   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

699757 : 753634

Organic_Lake_phycodnavirus(18.18%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_149569729.1\|699757_700618_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	9.6e-42	39.0
WP_038237253.1\|700614_700908_-\|transposase	transposase	NA	NA	NA	NA
WP_003465899.1\|701189_702404_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_087960474.1\|702616_704704_+	S9 family peptidase	F2Y2Z7	Organic_Lake_phycodnavirus	5.2e-25	34.7
WP_003465893.1\|705021_705405_+	YbaN family protein	NA	NA	NA	NA
WP_003465890.1\|705489_705741_+	lipoprotein	NA	NA	NA	NA
WP_003465888.1\|705733_706588_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_003465885.1\|706584_707256_+	DUF484 family protein	NA	NA	NA	NA
WP_080964742.1\|707252_708221_+	tyrosine recombinase XerC	A0A166YH27	Gordonia_phage	1.5e-14	33.8
WP_058364665.1\|708288_708840_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_047324534.1\|708954_710319_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A173GFL6	Erwinia_phage	3.7e-40	27.7
WP_058364664.1\|710557_711922_-	DUF2252 family protein	NA	NA	NA	NA
WP_003465869.1\|712031_713210_-	DUF1624 domain-containing protein	NA	NA	NA	NA
WP_058364663.1\|713269_715459_+	TonB-dependent receptor	NA	NA	NA	NA
WP_003465861.1\|715488_715944_-	nucleoside deaminase	NA	NA	NA	NA
WP_003465858.1\|716066_716828_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA
WP_003465854.1\|717018_718956_+	M1 family metallopeptidase	NA	NA	NA	NA
WP_003465851.1\|719088_720078_+	alpha/beta hydrolase	R4JP33	Mycobacterium_phage	8.0e-08	38.1
WP_058364662.1\|720074_720794_+	hypothetical protein	NA	NA	NA	NA
WP_047324540.1\|720784_721411_+	HAD family hydrolase	NA	NA	NA	NA
WP_003465839.1\|723909_724842_-	carbohydrate kinase family protein	NA	NA	NA	NA
WP_003465837.1\|725103_726150_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	1.6e-06	21.2
WP_058364661.1\|726320_727391_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_003465834.1\|727387_727876_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_058364666.1\|727883_729938_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_003465831.1\|729934_731053_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_058364660.1\|731382_732720_+	virulence factor family protein	NA	NA	NA	NA
WP_003465827.1\|732716_734126_+	endopolygalacturonase	NA	NA	NA	NA
WP_047324542.1\|734566_735703_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_058364659.1\|735699_737202_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	2.1e-15	49.4
WP_003465820.1\|737397_738609_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.2e-67	41.5
WP_149569730.1\|739373_740336_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_047325537.1\|740688_740919_+	hypothetical protein	NA	NA	NA	NA
WP_058361876.1\|740968_742027_-	lipid A deacylase LpxR family protein	NA	NA	NA	NA
WP_053838422.1\|742306_742585_+	DUF493 family protein	NA	NA	NA	NA
WP_058364751.1\|742572_743286_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_003472348.1\|743308_744319_+	lipoyl synthase	NA	NA	NA	NA
WP_003472349.1\|744559_746737_+	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.2e-80	31.8
WP_141697391.1\|747051_747996_-	TSUP family transporter	NA	NA	NA	NA
WP_058361873.1\|747880_748804_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058364752.1\|748831_749710_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_003473577.1\|749979_751035_+	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	A0A1B0V161	Roseobacter_phage	1.3e-77	45.0
WP_003473576.1\|751099_752524_+	nicotinate phosphoribosyltransferase	A0A1B0V392	Roseobacter_phage	1.8e-130	53.1
WP_149569731.1\|752671_753634_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1036532 : 1069202

Leptospira_phage(10.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_108084678.1\|1036532_1037634_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.2e-42	40.6
WP_038237773.1\|1038586_1039513_+\|transposase	IS110 family transposase	Q75QL1	Wolbachia_phage	4.3e-24	32.3
WP_149569803.1\|1039989_1044960_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA
WP_047324607.1\|1045354_1048255_+	TonB-dependent receptor	NA	NA	NA	NA
WP_003468853.1\|1048284_1049229_+	glycerophosphodiester phosphodiesterase family protein	A0A0S2MYI4	Enterococcus_phage	1.7e-07	35.1
WP_047325550.1\|1049529_1050207_-	hypothetical protein	NA	NA	NA	NA
WP_047324608.1\|1050815_1053239_+	penicillin-binding protein 1C	NA	NA	NA	NA
WP_047324345.1\|1053307_1054279_-\|transposase	IS110 family transposase	A0A1X9I5Z0	Streptococcus_phage	2.8e-05	34.1
WP_003468858.1\|1054684_1055260_-	bacterioferritin	NA	NA	NA	NA
WP_003468860.1\|1055295_1055778_-	peroxiredoxin	A0A1D8KSL1	Synechococcus_phage	1.3e-24	37.0
WP_003468862.1\|1055947_1056415_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_058364747.1\|1056551_1057448_+	DnaJ domain-containing protein	A0A2L0UZR4	Agrobacterium_phage	1.3e-20	27.9
WP_003467543.1\|1057729_1058113_-	response regulator	W8CYM9	Bacillus_phage	9.6e-10	33.0
WP_038237239.1\|1058195_1059200_-	acryloyl-CoA reductase	NA	NA	NA	NA
WP_003467541.1\|1059342_1060488_+\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_003467539.1\|1060484_1061345_+\|protease	protease modulator HflC	NA	NA	NA	NA
WP_003467537.1\|1061521_1061707_+	DUF2065 family protein	NA	NA	NA	NA
WP_003467534.1\|1061976_1063269_+	adenylosuccinate synthase	W5S5V7	Pithovirus	8.4e-74	37.5
WP_058364748.1\|1063689_1064913_+	DUF1444 family protein	NA	NA	NA	NA
WP_058361810.1\|1065048_1067706_+	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	3.0e-78	29.8
WP_149569734.1\|1068030_1069202_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.1e-88	60.5

DBSCAN-SWA_3

1415414 : 1462580

Vibrio_phage(16.67%)

protease,plate,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058364570.1\|1415414_1417481_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_149569740.1\|1417479_1417788_+	hypothetical protein	NA	NA	NA	NA
WP_003467096.1\|1417736_1418189_-	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_087960486.1\|1418442_1418832_-	VOC family protein	NA	NA	NA	NA
WP_003467100.1\|1418834_1419200_-	bleomycin resistance family protein	NA	NA	NA	NA
WP_003467103.1\|1419346_1420822_+	S-methylmethionine permease	NA	NA	NA	NA
WP_047324715.1\|1420811_1421765_+	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_003467112.1\|1421932_1423810_-	DUF885 family protein	NA	NA	NA	NA
WP_003467117.1\|1424103_1424877_-	queuosine precursor transporter	NA	NA	NA	NA
WP_058364571.1\|1424882_1425560_-	DUF502 domain-containing protein	A0A2I7S9X1	Vibrio_phage	4.6e-07	26.4
WP_108085092.1\|1425564_1425711_-	hypothetical protein	NA	NA	NA	NA
WP_003467122.1\|1425729_1426179_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_003467126.1\|1426326_1427190_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.0e-11	41.2
WP_058364579.1\|1427389_1428013_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_058364572.1\|1428271_1430914_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	1.5e-173	41.0
WP_003470922.1\|1431065_1431668_+	hypothetical protein	NA	NA	NA	NA
WP_003470923.1\|1431751_1432786_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_080964752.1\|1432782_1433622_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_003470927.1\|1433677_1434100_+	ribosome silencing factor	NA	NA	NA	NA
WP_081045896.1\|1434143_1435256_+	J domain-containing protein	NA	NA	NA	NA
WP_003470932.1\|1435278_1435749_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_038238953.1\|1435926_1438695_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	3.6e-50	26.9
WP_003470934.1\|1438860_1439529_-	energy transducer TonB	NA	NA	NA	NA
WP_003470935.1\|1439766_1440504_-	SIMPL domain-containing protein	NA	NA	NA	NA
WP_003470936.1\|1440637_1441204_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_003470937.1\|1441203_1442694_+	ribonuclease G	NA	NA	NA	NA
WP_058364574.1\|1442828_1446740_+	TIGR02099 family protein	NA	NA	NA	NA
WP_058364575.1\|1446804_1448247_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_003467666.1\|1448412_1449015_-	ribosome-associated protein	NA	NA	NA	NA
WP_047324725.1\|1449080_1450445_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_047324726.1\|1450713_1451091_+	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_003467682.1\|1451524_1452031_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_058364576.1\|1452041_1453541_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_003467690.1\|1453646_1454150_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_003467692.1\|1454187_1455030_+	ImpE protein	NA	NA	NA	NA
WP_003467697.1\|1455017_1455521_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_058364577.1\|1455520_1457398_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_047324728.1\|1457361_1458375_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_058364578.1\|1458402_1461234_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	1.9e-78	28.6
WP_108084761.1\|1461448_1462580_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-54	44.5

DBSCAN-SWA_4

2236435 : 2264330

Siphoviridae_environmental_samples(40.91%)

terminase,tail,integrase

attL 2242633:2242652|attR 2265876:2265895

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058364328.1\|2236435_2236930_+	hypothetical protein	A0A2H4JFP9	uncultured_Caudovirales_phage	2.2e-35	53.7
WP_058364329.1\|2236931_2237390_+	hypothetical protein	NA	NA	NA	NA
WP_058195492.1\|2237386_2237878_+	hypothetical protein	Q2NPA5	Xanthomonas_phage	4.2e-26	40.8
WP_058364330.1\|2238001_2238253_+	hypothetical protein	NA	NA	NA	NA
WP_058364331.1\|2238249_2238759_+	hypothetical protein	NA	NA	NA	NA
WP_058364332.1\|2238958_2239438_+\|terminase	terminase small subunit	U5PZD3	Bacillus_phage	2.0e-09	52.1
WP_081045863.1\|2239388_2240921_+\|terminase	phage terminase large subunit	H9C0U8	Aeromonas_phage	5.8e-74	38.7
WP_058364333.1\|2240920_2242297_+	DUF1073 domain-containing protein	L7TRA1	Rhizobium_phage	3.9e-130	53.6
WP_058364334.1\|2242300_2243434_+	DUF2213 domain-containing protein	A0A2R3UA67	Siphoviridae_environmental_samples	4.0e-104	57.0
2242633:2242652	attL	NA	NA	NA	NA
WP_058195497.1\|2243437_2243884_+	DUF2190 family protein	A0A2R3UAC1	Siphoviridae_environmental_samples	1.0e-42	66.7
WP_108085338.1\|2243932_2244844_+	DUF2184 domain-containing protein	A0A2R3UA82	Siphoviridae_environmental_samples	1.6e-119	70.3
WP_058195499.1\|2244893_2245199_+	hypothetical protein	NA	NA	NA	NA
WP_058195500.1\|2245202_2245715_+	hypothetical protein	A0A059VG19	Pseudomonas_phage	1.7e-41	54.1
WP_058364335.1\|2245711_2246068_+	hypothetical protein	A0A2D0W8Z7	Bordetella_virus	9.2e-07	31.4
WP_058364336.1\|2246067_2247162_+	hypothetical protein	M4R217	Salicola_phage	4.5e-60	37.8
WP_058195532.1\|2247235_2247568_+	hypothetical protein	A0A076G8G8	Sinorhizobium_phage	2.2e-15	43.6
WP_058363611.1\|2247564_2247975_+	hypothetical protein	NA	NA	NA	NA
WP_058195504.1\|2248003_2248228_+	hypothetical protein	NA	NA	NA	NA
WP_058195505.1\|2248468_2248936_+	hypothetical protein	W6EKF5	Rhizobium_phage	2.9e-37	51.3
WP_058363612.1\|2249031_2249406_+	hypothetical protein	NA	NA	NA	NA
WP_058363613.1\|2249426_2249765_+	hypothetical protein	NA	NA	NA	NA
WP_058364337.1\|2249768_2253104_+	hypothetical protein	A0A2R3UAA7	Siphoviridae_environmental_samples	5.1e-83	33.7
WP_058195509.1\|2253103_2253436_+\|tail	phage tail protein	A0A2R3UA73	Siphoviridae_environmental_samples	1.3e-23	51.8
WP_058364338.1\|2253445_2253952_+	hypothetical protein	A0A2R3UA85	Siphoviridae_environmental_samples	1.3e-25	40.2
WP_058195511.1\|2253951_2254227_+	hypothetical protein	A0A0A0YUD8	Pseudomonas_phage	4.3e-12	55.2
WP_058195512.1\|2254223_2254544_+	hypothetical protein	NA	NA	NA	NA
WP_058364339.1\|2254540_2255239_+\|tail	phage minor tail protein L	A0A2R3UA90	Siphoviridae_environmental_samples	2.6e-98	71.7
WP_058364353.1\|2255303_2256047_+	C40 family peptidase	A0A2R3UAR4	Siphoviridae_environmental_samples	3.1e-81	57.6
WP_058364340.1\|2256043_2256649_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	6.3e-48	54.6
WP_058364341.1\|2256645_2260137_+	host specificity protein J	A0A2R3UA88	Siphoviridae_environmental_samples	0.0e+00	58.8
WP_141695968.1\|2260136_2260529_+	hypothetical protein	NA	NA	NA	NA
WP_141697342.1\|2260528_2261263_+	hypothetical protein	NA	NA	NA	NA
WP_149569750.1\|2261429_2261630_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_141697344.1\|2261622_2262147_-	hypothetical protein	NA	NA	NA	NA
WP_058363619.1\|2262133_2262364_-	hypothetical protein	NA	NA	NA	NA
WP_058363620.1\|2262360_2262624_-	hypothetical protein	NA	NA	NA	NA
WP_058363621.1\|2263370_2264330_-\|integrase	site-specific integrase	A0A1B1P9F9	Acinetobacter_phage	3.0e-76	47.9
2265876:2265895	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2353837 : 2386956

Xanthomonas_phage(44.44%)

integrase,transposase

attL 2350737:2350754|attR 2373816:2373833

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2350737:2350754	attL	NA	NA	NA	NA
WP_149569749.1\|2353837_2354972_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.9e-94	63.5
WP_038237253.1\|2355311_2355605_+\|transposase	transposase	NA	NA	NA	NA
WP_108084895.1\|2355601_2356462_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.3e-42	39.4
WP_058358319.1\|2356514_2357234_+	hypothetical protein	NA	NA	NA	NA
WP_081045949.1\|2357619_2358732_+	FRG domain-containing protein	NA	NA	NA	NA
WP_108084546.1\|2358643_2359448_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.0e-08	33.7
WP_058361713.1\|2360195_2362130_-	AAA family ATPase	NA	NA	NA	NA
WP_047324923.1\|2362126_2364157_-	AAA family ATPase	NA	NA	NA	NA
WP_058364688.1\|2364244_2365333_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_080964775.1\|2365437_2366382_+	DNA-binding protein	NA	NA	NA	NA
WP_081045917.1\|2366305_2366965_+	hypothetical protein	NA	NA	NA	NA
WP_003474447.1\|2367516_2368686_-	hypothetical protein	A0A077JGB2	Xanthomonas_phage	1.3e-134	61.5
WP_080603019.1\|2368682_2369000_-	DUF2523 domain-containing protein	A0A077JCZ2	Xanthomonas_phage	3.6e-47	85.7
WP_003474438.1\|2370656_2370899_-	hypothetical protein	A0A077JBM7	Xanthomonas_phage	1.3e-17	73.5
WP_087960554.1\|2370904_2371099_-	hypothetical protein	A0A077JGA5	Xanthomonas_phage	1.8e-09	60.0
WP_003474436.1\|2371111_2371399_-	hypothetical protein	NA	NA	NA	NA
WP_149569754.1\|2371581_2372202_-	replication endonuclease	NA	NA	NA	NA
WP_003474433.1\|2372497_2372686_-	hypothetical protein	NA	NA	NA	NA
WP_003474432.1\|2372714_2372924_-	hypothetical protein	NA	NA	NA	NA
WP_128809029.1\|2372920_2373103_-	hypothetical protein	NA	NA	NA	NA
WP_081045918.1\|2373342_2373696_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_080627710.1\|2373837_2374233_+	hypothetical protein	NA	NA	NA	NA
2373816:2373833	attR	NA	NA	NA	NA
WP_003472166.1\|2374338_2376069_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	4.0e-39	28.8
WP_003472164.1\|2376065_2376986_-	hypothetical protein	NA	NA	NA	NA
WP_003472162.1\|2376990_2377467_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_058359162.1\|2377463_2380706_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_038239542.1\|2380707_2381112_-	four helix bundle protein	NA	NA	NA	NA
WP_038239539.1\|2381108_2382263_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA
WP_080964776.1\|2382424_2383141_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_058364689.1\|2383452_2384163_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_003471895.1\|2384185_2385394_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_149569755.1\|2385785_2386956_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-88	60.2

DBSCAN-SWA_6

2609289 : 2670862

uncultured_Mediterranean_phage(12.5%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047324989.1\|2609289_2610240_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_047324990.1\|2610239_2611139_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.9e-24	35.5
WP_087960521.1\|2611485_2613426_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	4.1e-117	41.8
WP_003471335.1\|2613479_2614112_-	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_003471333.1\|2614178_2614484_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_003471330.1\|2614503_2614878_+	Xcc1710-like domain-containing protein	NA	NA	NA	NA
WP_038239194.1\|2615074_2615893_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_003471327.1\|2615871_2616486_-	DedA family protein	NA	NA	NA	NA
WP_003474035.1\|2616550_2617228_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.6e-39	52.0
WP_003471322.1\|2617224_2618004_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.9e-77	55.6
WP_003471319.1\|2618105_2618639_+	hypothetical protein	NA	NA	NA	NA
WP_081045847.1\|2618655_2619720_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_058364122.1\|2619716_2620208_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_087960520.1\|2620280_2620985_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_003471312.1\|2620981_2621332_-	cell division protein FtsB	NA	NA	NA	NA
WP_058362355.1\|2621335_2622628_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	9.4e-142	62.0
WP_047324991.1\|2622810_2623647_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	3.4e-52	43.1
WP_058362996.1\|2623837_2625502_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.9e-145	49.7
WP_003471305.1\|2625639_2625894_-	hypothetical protein	NA	NA	NA	NA
WP_058364121.1\|2626060_2627950_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.1e-90	32.9
WP_149569759.1\|2628486_2630037_+	S10 family peptidase	NA	NA	NA	NA
WP_058358990.1\|2630141_2631263_-	inorganic phosphate transporter	NA	NA	NA	NA
WP_003471294.1\|2631348_2631975_-	DUF47 family protein	NA	NA	NA	NA
WP_003471292.1\|2632225_2633569_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003471285.1\|2633552_2634203_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_003471284.1\|2634673_2635669_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_003471283.1\|2635968_2636775_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_058358988.1\|2636871_2637612_-	sulfurtransferase	NA	NA	NA	NA
WP_003471281.1\|2637640_2638006_-	hypothetical protein	NA	NA	NA	NA
WP_038239202.1\|2638071_2638515_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_058364119.1\|2638528_2639791_+	TIGR03862 family flavoprotein	NA	NA	NA	NA
WP_038239135.1\|2639816_2642003_-	diguanylate cyclase	G3MA91	Bacillus_virus	2.2e-18	34.7
WP_058364118.1\|2642208_2643834_-	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
WP_058364141.1\|2643960_2645253_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA
WP_003471266.1\|2645550_2645874_+	hypothetical protein	NA	NA	NA	NA
WP_003471264.1\|2645883_2646864_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003471263.1\|2647053_2649543_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	4.5e-07	26.2
WP_058364117.1\|2649539_2650493_+	1-phosphofructokinase family hexose kinase	NA	NA	NA	NA
WP_058364116.1\|2650587_2652315_+	PTS fructose transporter subunit IIBC	NA	NA	NA	NA
WP_003470786.1\|2652406_2653678_+	carbohydrate porin	NA	NA	NA	NA
WP_003470782.1\|2654192_2654885_+	response regulator transcription factor	NA	NA	NA	NA
WP_003470779.1\|2654893_2656312_+	sensor histidine kinase	NA	NA	NA	NA
WP_047324998.1\|2656518_2656950_+\|transposase	IS200/IS605 family transposase	I4AZM1	Saccharomonospora_phage	1.2e-08	32.5
WP_003470770.1\|2658402_2659536_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_058364115.1\|2659532_2660297_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-40	40.4
WP_003470766.1\|2660293_2661199_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003470764.1\|2661266_2662094_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_047325001.1\|2662093_2662456_+	EamA family transporter	NA	NA	NA	NA
WP_047325002.1\|2662452_2662851_+	EamA family transporter	NA	NA	NA	NA
WP_149569760.1\|2663187_2664308_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	8.4e-46	41.9
WP_081045951.1\|2666795_2667203_-	hypothetical protein	NA	NA	NA	NA
WP_108084998.1\|2667478_2668704_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.4e-110	69.9
WP_149569761.1\|2668900_2670072_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.9e-89	60.5
WP_146169985.1\|2670092_2670572_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.7e-09	30.2
WP_038237253.1\|2670568_2670862_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_7

3174729 : 3249032

Leptospira_phage(30.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047324397.1\|3174729_3175032_+\|transposase	transposase	U5P4I9	Shigella_phage	1.0e-11	48.8
WP_149569770.1\|3175049_3175406_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_108084761.1\|3175467_3176599_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-54	44.5
WP_149569771.1\|3177170_3177980_+	hypothetical protein	NA	NA	NA	NA
WP_003466971.1\|3178626_3179238_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_038237018.1\|3179377_3180298_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003466965.1\|3180294_3182775_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_058364597.1\|3183018_3184074_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_058364596.1\|3184159_3185062_-	hypothetical protein	NA	NA	NA	NA
WP_058364595.1\|3186872_3187871_-	farnesyl-diphosphate synthase	NA	NA	NA	NA
WP_003466960.1\|3188022_3189366_-	cytochrome P450	NA	NA	NA	NA
WP_053838765.1\|3189365_3190208_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.3e-14	28.6
WP_003466955.1\|3190194_3190497_-	ferredoxin	NA	NA	NA	NA
WP_058364592.1\|3190498_3191788_-	cytochrome P450	NA	NA	NA	NA
WP_038237017.1\|3191880_3193083_-	cytochrome P450	NA	NA	NA	NA
WP_081045898.1\|3193091_3194054_-	cytochrome P450	NA	NA	NA	NA
WP_141695984.1\|3194356_3194692_-	hypothetical protein	NA	NA	NA	NA
WP_003466948.1\|3195057_3195411_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_038237024.1\|3195495_3196803_-	MFS transporter	NA	NA	NA	NA
WP_003466943.1\|3196979_3198575_+\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.1e-51	30.8
WP_003466940.1\|3198609_3199506_-	DMT family transporter	NA	NA	NA	NA
WP_003466936.1\|3199787_3201176_+	serine hydrolase	NA	NA	NA	NA
WP_003466932.1\|3201934_3202393_-	hypothetical protein	NA	NA	NA	NA
WP_139115840.1\|3202731_3203055_-	hypothetical protein	NA	NA	NA	NA
WP_003466930.1\|3203698_3204094_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_003466929.1\|3204206_3205313_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA
WP_149507761.1\|3205280_3205535_+	hypothetical protein	NA	NA	NA	NA
WP_003472763.1\|3205715_3206147_-	NfeD family protein	NA	NA	NA	NA
WP_003472760.1\|3206150_3207119_-	SPFH/Band 7/PHB domain protein	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	4.3e-22	33.3
WP_139116015.1\|3207228_3207315_-	DUF962 domain-containing protein	NA	NA	NA	NA
WP_003472758.1\|3207462_3207786_-	YnfA family protein	A0A218MNG8	uncultured_virus	3.6e-26	55.9
WP_081045912.1\|3207782_3208712_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_003472753.1\|3208837_3209638_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_087960535.1\|3209634_3210204_-	ADP compounds hydrolase NudE	NA	NA	NA	NA
WP_038240012.1\|3210263_3211655_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	5.9e-09	23.4
WP_047325134.1\|3211645_3212377_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_058364650.1\|3212866_3215473_+	TonB-dependent receptor	NA	NA	NA	NA
WP_003472212.1\|3215838_3216861_-	ROK family protein	NA	NA	NA	NA
WP_058364651.1\|3217658_3220343_+	TonB-dependent receptor	NA	NA	NA	NA
WP_081045910.1\|3220449_3222144_+	alpha-L-fucosidase	NA	NA	NA	NA
WP_058361890.1\|3222157_3223213_+	glycosyl hydrolase	A0A2P1CFB9	Microbacterium_phage	1.3e-08	23.8
WP_047325137.1\|3223268_3225758_+	family 20 glycosylhydrolase	NA	NA	NA	NA
WP_058364652.1\|3225775_3228475_+	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_149569772.1\|3228516_3231204_+	glycoside hydrolase family 3 protein	NA	NA	NA	NA
WP_058363361.1\|3231552_3234240_+	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_047325140.1\|3234239_3234434_+	hypothetical protein	NA	NA	NA	NA
WP_003471177.1\|3234565_3236023_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_003471175.1\|3236131_3238474_+	alpha-1,2-mannosidase	NA	NA	NA	NA
WP_058364653.1\|3238598_3240446_+	beta-galactosidase	NA	NA	NA	NA
WP_141697110.1\|3240753_3241329_+	hypothetical protein	NA	NA	NA	NA
WP_149569773.1\|3241325_3241742_+	hypothetical protein	NA	NA	NA	NA
WP_149569774.1\|3242060_3242948_+	hypothetical protein	NA	NA	NA	NA
WP_081045911.1\|3243502_3243754_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_058195942.1\|3243792_3244026_+	hypothetical protein	NA	NA	NA	NA
WP_141696173.1\|3244053_3244263_-	hypothetical protein	NA	NA	NA	NA
WP_080627695.1\|3244261_3244975_+	hypothetical protein	NA	NA	NA	NA
WP_149569775.1\|3244922_3245291_-	hypothetical protein	NA	NA	NA	NA
WP_108084678.1\|3245357_3246460_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.2e-42	40.6
WP_108084678.1\|3247929_3249032_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.2e-42	40.6

DBSCAN-SWA_8

3910693 : 3917037

Escherichia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003466794.1\|3910693_3912040_+	phosphoglucomutase/phosphomannomutase	A0A127AWJ1	Bacillus_phage	1.1e-31	27.5
WP_058361293.1\|3912088_3913492_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	3.8e-48	29.1
WP_003466792.1\|3913571_3914486_-	dTDP-4-dehydrorhamnose reductase	A0A1D7XFA3	Escherichia_phage	1.3e-25	33.2
WP_003466791.1\|3914482_3915040_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-44	49.4
WP_003466790.1\|3915036_3915924_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.1e-93	58.5
WP_058364068.1\|3915981_3917037_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	5.2e-74	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043500

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection