CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043562	Klebsiella pneumoniae strain P094-1 chromosome, complete genome	2 crisprs	csa3,cas3,DEDDh,DinG,WYL	0	1	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043562_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043562_1

278986-279084

Orphan

Consensus_repeat	Method
CCGGATGGCGGCGCGTAGCGCCTTATCCGGGCTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043562_1

>merge|NZ_CP043562|1|278986-279084|CRISPRCasFinder
CCGGATGGCGGCGCGTAGCGCCTTATCCGGGCTACCCCTTTATGCCGTTATGTTGTCTTTTGCCGGGTGGCGGCGCGTAGCGCCTTATCCGGGCTACCC

>NZ_CP043562|1|1|278986-279084|CRISPRCasFinder
CCGGATGGCGGCGCGTAGCGCCTTATCCGGGCTACCC	CTTTATGCCGTTATGTTGTCTTTTG
CCGGGTGGCGGCGCGTAGCGCCTTATCCGGGCTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043562.1\|WP_004173994.1\|285804_286860_+\|cell-division-protein-FtsX	unknown	unknown	gnl\|CDD\|182910
NZ_CP043562.1\|WP_002920860.1\|277860_278526_-\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	unknown	unknown	gnl\|CDD\|183041
NZ_CP043562.1\|WP_149362142.1\|288036_289560_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224089
NZ_CP043562.1\|WP_002920858.1\|278732_278978_+\|sulfurtransferase-TusA	unknown	unknown	gnl\|CDD\|178967
NZ_CP043562.1\|WP_149362139.1\|274825_275875_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|183405
NZ_CP043562.1\|WP_002920815.1\|287129_287984_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP043562.1\|WP_004173987.1\|281432_282059_-\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|226237
NZ_CP043562.1\|WP_002920864.1\|274110_274449_+\|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnE	unknown	unknown	gnl\|CDD\|185011
NZ_CP043562.1\|WP_002920825.1\|282200_282560_+\|DUF2500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378475
NZ_CP043562.1\|WP_149362140.1\|279143_281354_-\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	unknown	unknown	gnl\|CDD\|236827
NZ_CP043562.1\|WP_002920820.1\|282838_283435_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	unknown	unknown	gnl\|CDD\|236793
NZ_CP043562.1\|WP_130972912.1\|272449_274114_+\|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase	unknown	unknown	gnl\|CDD\|237330
NZ_CP043562.1\|WP_149362141.1\|283617_285141_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP043562.1\|WP_002920861.1\|277229_277787_-\|DcrB-family-lipoprotein	unknown	unknown	gnl\|CDD\|183232
NZ_CP043562.1\|WP_004901130.1\|276008_277229_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|235348
NZ_CP043562.1\|WP_002920822.1\|282573_282849_-\|DUF1145-family-protein	unknown	unknown	gnl\|CDD\|182831
NZ_CP043562.1\|WP_002920863.1\|274448_274829_+\|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnF	unknown	unknown	gnl\|CDD\|235094
NZ_CP043562.1\|WP_002920817.1\|285143_285812_+\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|182829
NZ_CP043562.1\|WP_002921032.1\|269565_271551_+\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	unknown	unknown	gnl\|CDD\|236156
NZ_CP043562.1\|WP_009308746.1\|271547_272450_+\|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase	unknown	unknown	gnl\|CDD\|185292

Protein	Function_ID	Function_description	E-value
NZ_CP043562.1\|WP_004173994.1\|285804_286860_+\|cell-division-protein-FtsX	gnl\|CDD\|182910	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional.	0
NZ_CP043562.1\|WP_002920860.1\|277860_278526_-\|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter	gnl\|CDD\|183041	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter.	2.57301e-136
NZ_CP043562.1\|WP_149362142.1\|288036_289560_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.30119e-133
NZ_CP043562.1\|WP_002920858.1\|278732_278978_+\|sulfurtransferase-TusA	gnl\|CDD\|178967	PRK00299, PRK00299, sulfurtransferase TusA.	1.03935e-54
NZ_CP043562.1\|WP_149362139.1\|274825_275875_-\|AI-2E-family-transporter	gnl\|CDD\|183405	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed.	1.05118e-107
NZ_CP043562.1\|WP_002920815.1\|287129_287984_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	0
NZ_CP043562.1\|WP_004173987.1\|281432_282059_-\|lysoplasmalogenase	gnl\|CDD\|226237	COG3714, COG3714, Predicted membrane protein [Function unknown].	1.30283e-47
NZ_CP043562.1\|WP_002920864.1\|274110_274449_+\|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnE	gnl\|CDD\|185011	PRK15051, PRK15051, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional.	3.00737e-58
NZ_CP043562.1\|WP_002920825.1\|282200_282560_+\|DUF2500-domain-containing-protein	gnl\|CDD\|378475	pfam10694, DUF2500, Protein of unknown function (DUF2500). The members of this family are largely confined to the Gammaproteobacteria. The function is not known.	1.49525e-30
NZ_CP043562.1\|WP_149362140.1\|279143_281354_-\|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA	gnl\|CDD\|236827	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional.	0
NZ_CP043562.1\|WP_002920820.1\|282838_283435_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase	gnl\|CDD\|236793	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional.	1.34196e-147
NZ_CP043562.1\|WP_130972912.1\|272449_274114_+\|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase	gnl\|CDD\|237330	PRK13279, arnT, lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.	0
NZ_CP043562.1\|WP_149362141.1\|283617_285141_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP043562.1\|WP_002920861.1\|277229_277787_-\|DcrB-family-lipoprotein	gnl\|CDD\|183232	PRK11615, PRK11615, hypothetical protein; Provisional.	5.64558e-114
NZ_CP043562.1\|WP_004901130.1\|276008_277229_+\|MFS-transporter	gnl\|CDD\|235348	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional.	0
NZ_CP043562.1\|WP_002920822.1\|282573_282849_-\|DUF1145-family-protein	gnl\|CDD\|182831	PRK10910, PRK10910, DUF1145 family protein.	9.54762e-45
NZ_CP043562.1\|WP_002920863.1\|274448_274829_+\|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnF	gnl\|CDD\|235094	PRK02971, PRK02971, 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional.	3.35021e-37
NZ_CP043562.1\|WP_002920817.1\|285143_285812_+\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|182829	PRK10908, PRK10908, cell division ATP-binding protein FtsE.	2.82021e-162
NZ_CP043562.1\|WP_002921032.1\|269565_271551_+\|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA	gnl\|CDD\|236156	PRK08125, PRK08125, bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA.	0
NZ_CP043562.1\|WP_009308746.1\|271547_272450_+\|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase	gnl\|CDD\|185292	PRK15394, PRK15394, 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD; Provisional.	0

>NZ_CP043562.1|WP_002920858.1|278732_278978_+|sulfurtransferase-TusA
MSELFSTPDHTLDALGLRCPEPVMMVRKTVRTMPVGETLLIIADDPATTRDIPGFCRFMEHELVAQETEALPYRYLIRKSH
>NZ_CP043562.1|WP_002920860.1|277860_278526_-|7-cyano-7-deazaguanine/7-aminomethyl-7--deazaguanine-transporter
MNPFTTVQRKKALVWLSLFHLLVITSSNYLVQLPISIFGFHTTWGAFSFPFIFLATDLTVRIFGAPLARRIIFAVMVPALAISYGISALFYMGEWQGFAALGTFNLFVARIAVASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNISDTVAFFFIAFWRSPDPFMAAHWGEIALVDYSFKVLISIIFFLPMYGVLLNMLLKRLADKSDLSALQPS
>NZ_CP043562.1|WP_002920861.1|277229_277787_-|DcrB-family-lipoprotein
MRNLVKYVGIGLLVMGLAACDNSDSKAPTVGAAAESNASGQAISLLDGKLSFTLPAGMADQSGKLGTQANNMHVYSDATGQKAVIVIVGDSTNEDLAVLAKRLEDQQRSRDPQLQVVSNKPLEIKGHTLQQLDSIISAKGQTAWSSVILGKVDDKLLTLQVTLPADNQQQAQTEAESIINTLTIQ
>NZ_CP043562.1|WP_004901130.1|276008_277229_+|MFS-transporter
MPEPVAEPALNGLRLNLRIVSVVIFNFASYLTIGLPLAVLPGYVHDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLGGCFLSGLSYLLAAWGSGWPLISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYSHIGLSGLAGVIMAVALVAILCALPRAAVKAAKGKAMSFRAVLGRVWPYGMALALASAGFGVIATFITLFYDAKGWDGAAFALTLFSCAFVGSRLLFPNAINRLGGLNVAMLCFSVEAIGLLLVGFADTPMMAKIGTFLTGAGFSLVFPALGVVAVKAVPQHNQGSALATYTVFMDLSLGVSGPLAGLLMAWTGISMIYLAAAGLVMAALLLGWRLKKRPPVSEPEASAPGQ
>NZ_CP043562.1|WP_149362139.1|274825_275875_-|AI-2E-family-transporter
MSPLQADKAGLHILLKLAALVIILAGIHAAADILVQLLLALFFAIVLNPLVTWLIRRGVRRPFAITLVVTAMLVMLTALLGVLAASLNDFVAMLPDFNRALTRKILQLQEYLPFLNLHINPERMLRRMDSERLMTWATTLMTQLSGAMASIVLLVMTVIFMLFEVRHLPYKLRFALNNPRLHIAGLHRALKGVTHYLALKTLISLWTGLIVWLGLLAMGVQFALMWGVLAFLLNYVPNIGSAISAIPPMLQALLFSGIYECLLVGALFLVVHMVLGNMVEPRMMGHRLGMSTLVVFLSLLVWGWLLGPVGMLLSVPLTSVCKIWMETTVGGSKLAILLGPGRPKSRLPG
>NZ_CP043562.1|WP_002920863.1|274448_274829_+|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnF
MGFFWALLSVGLVSAAQLLLRSAMVALPPLTDIVAFLQHLLHFQPGTFGLFFGLLGYLLSMVCWYFALHRLPLSKAYALLSLSYILVWAAAIWLPGWHEPFYWQSLLGVAIIVAGVLTIFWPVKRR
>NZ_CP043562.1|WP_002920864.1|274110_274449_+|4-amino-4-deoxy-L-arabinose-phosphoundecaprenol-flippase-subunit-ArnE
MSVWICLVCASLLSCAGQLCQKQATRPSRRGRRSRHILFWLGMALLCLGCGMLLWLSVLQSIPVSIAYPMLSLNFVWVTLAGWGIWHEPVARRHWLGVGLIVVGIVILGTSV
>NZ_CP043562.1|WP_130972912.1|272449_274114_+|lipid-IV(A)-4-amino-4-deoxy-L-arabinosyltransferase
MKSIRYGVSLIALFALFALYYLLPLNFRLLWQPDETRYAEISREMLATGDWVVPHFLGLRYFEKPIAGYWINSIGQWLFGHNNFGVRFGSVFAITMTALLVAWLAWRIFRDKRVAILSPIIFLTAMLVYAIGTYAVLDPMITLWLALAMCSFWGAAQAHSRSGKILGYVLLGVACGMGVMTKGFLALAVPVVGVLPWVIARKRWREVLTYGWLAVIVCTLVVLPWGLAIAQREPDFWRYFFWVEHIQRFAEKDAQHKAPFWYYIPFLIAGSLPWLALLPGALKRGWLERDEARGALYLLGWVAMPFLFFSIAKGKLPTYILPCFAPLSILMARYALEAAKTGAKALRINGMINLGVGLLGLIAVLVVSPWGFMHRPVWTKIELYKCLLAAIAFAVWALMGWLAMKDSGRRWSLAALCPLGLALLVGFAIPDRVIDSKQPQFLVDIVSESLQPSRYVLTNNVGIAGGLAWELKRSDIIMFDKQGELKYGLDWPDAQGSFVSQAGFADWLAAHRQQGPVSLVLLMDKGESMLDLPLPKPDNAYELGRVVFLQYLPQ
>NZ_CP043562.1|WP_009308746.1|271547_272450_+|4-deoxy-4-formamido-L-arabinose--phosphoundecaprenol-deformylase
MKQVGLRIDVDTFRGTRDGVPRLLELLGRHGIQASFFFSVGPDNMGRHLWRLVKPKFLWKMLRSRAASLYGWDILLAGTAWPGRRIGAGNEAVIRAAAESHEVGLHAWDHYSWQAWSGVWPQERLALEVERGLLELERIIGRPVTCSAVAGWRADQRVVKAKESFDFLYNSDCRGTRPFLPQLGSGVSGTVQIPVTLPTWDEAVGTAVDIAGFNRYLLDCIHRDAGVPVYTIHAEVEGIAYADQFNELLTMAAEEEIQFCPLSQLLPADFSELPSGKVVRGELAGREGWLGREQLLTSGI
>NZ_CP043562.1|WP_002921032.1|269565_271551_+|bifunctional-UDP-4-amino-4-deoxy-L-arabinose-formyltransferase/UDP-glucuronic-acid-oxidase-ArnA
MKAVVFAYHDMGCTGIQSLLDAGYDIAAIFTHPDNPGENHFFGSVARLAAEQGIPVWAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAPLNWVLVNGESETGVTLHRMVNRADAGDIVAQQAVAIGADDAALTLHRKLCAAATELLSRALPAILAGTTDERPQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAGANKFIVWKSRVRHDLPAAKPGTVLSIAPLIVACQDGALEIVTGQTERGVYMQGAQLAQALGLVSGAVISSKPVVAIKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDCPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPSTSEVYGMCTDKNFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRTVELVDDKNP
>NZ_CP043562.1|WP_149362140.1|279143_281354_-|Zn(II)/Cd(II)/Pb(II)-translocating-P-type-ATPase-ZntA
MSTPDAQDKKVPQFSSFTMRPATAPAESCCTDHACATESAPAAEALSDARYRWQVDGMDCAACARKVETAVRQVPGVSQVQVLFATEKLLVNAEGDVRAQVENAVRQAGYTLRDADAPAAKQTRGSLLRDNLPLLTLVIMMALSWGLEQANHPAGQLAFIATTLVGLWPVARQALRLIKSGSWFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEGWAASRARQGVSALMALKPDTAIRLRNGVRETVAQRDLRPGDVIEVAAGGRLPADGQLLSPFASFDESALTGESVPVERQAGERVAAGATSVDRLVQLTVISEPGDSAIDRILKLIEEAEERRAPIERFIDRFSRIYTPAIMVVALLVAIVPPLFFASAWLPWIYKGLTLLLIGCPCALVISTPAAITSGLAVAARRGALIKGGAALEQLGQVRQVAFDKTGTLTVGQPQVTSVIATAEVDDNALLALAAAVEQGSSHPLAQAIVREAQRRQLSIPLASGQRALAGSGIEAEVNGSRILICAASKAAPAEHEAQIQQLESAGQTVVLVMRGETLFGILALRDTLRDDARQAVDALHQLGVQGVILTGDNPRAAAAIASELGLEFRAGLLPADKVNAVIALNADAPLAMVGDGINDAPAMKAATIGIAMGSGTDVALETADAALTHNRLTGLAQMISLARATHANIRQNIAIALGLKGIFLVTTLLGLTGLWLAVLADTGATVLVTANALRLLRKKL
>NZ_CP043562.1|WP_004173987.1|281432_282059_-|lysoplasmalogenase
MLWSFIAVCFSAWLYVDASYRGPAWRRWVFKPVTLILLLLLAWQAPMFNAISYLVLAGLCASLLGDALTLLPRQRVMYAVGAFFLSHLLYTIWFASQLTLSFFWPLPLVLLVFGALLMAVIWSRLEEMKMPVLTFIGMTLVMVWLAGELWFARPTNTALSGFAGAALLLLSNAVWLVSHYRRRFRADNAIAAAFYFAGHFLIVRALYL
>NZ_CP043562.1|WP_002920825.1|282200_282560_+|DUF2500-domain-containing-protein
MSKMPLFFVLVVAVIVVAASFRYVQQRREKQANDAAPLLQKRVIVSNKREKVINDRRSRQQTVTPAGSEMRYEASFRPENGGLEVVFRLDAPQYHALSVGDRGMLSYKGTAFVAFTPDP
>NZ_CP043562.1|WP_002920822.1|282573_282849_-|DUF1145-family-protein
MLINLGRLLMLCVWAFLLLNLFQPFPKPLNIFVNVALIFMILMHGLQLTLLKATQPKEAPPLSRFEQIRIFIFGVFELVAWQKKLKATLKK
>NZ_CP043562.1|WP_002920820.1|282838_283435_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase
MKKPNHAGSGQIRIIGGQWRGRKLPVPESPGLRPTTDRVRETLFNWLAPSIVDAHCLDCFAGSGALGLEALSRYAASTTLLEMERGVAQQLQKNLATLKADRGKVITTNTLSFLSQPGTPHQIVFVDPPFRQGLLEETLRLLETQGWLADEALVYVESEVENGLPPVPANWQLYREKVAGQVAYRLYQREAQGEHHAD
>NZ_CP043562.1|WP_149362141.1|283617_285141_+|signal-recognition-particle-docking-protein-FtsY
MAKEKKRGFFSWLGFGQKEQAQETETEQKVEEQQAVAEEIPAVETPAEPSAPKADPAAFAEDVVEVTETVVESEKAHLAEPARAQEEEWVETPALTEETPVVEPEAAVSEPPEQPAVVEPLAEEVIAEPVVAEAVAEQPVEGIVVQPQETEAPEEDAPLSDEELEAQALAAEAAEEAAVVVPAPEDEAPLEALAQEQEKPTKEGFFARLKRSLLKTKQNLGSGFISLFRGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARHVDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVDAPHEVMLTIDASTGQNAISQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFNAGDFIEALFARED
>NZ_CP043562.1|WP_002920817.1|285143_285812_+|cell-division-ATP-binding-protein-FtsE
MIRFEQVSKAYLGGRQALQGVTFHLQPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIFFSGHEISRLKSREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDEALSEGILRLFEEFNRVGVTVLMATHDLGLISSRPYRVLTLSDGHLHGGIRGE
>NZ_CP043562.1|WP_004173994.1|285804_286860_+|cell-division-protein-FtsX
MNKRDAMNQIRQFGSKFDRLRNAAGGGGGGRNAPKRPKAAPNPASRKSNVFNEQVRYAWHGALQDLKSTPLATFLTVMVIAISLTLPSVCYMVYKNVSSAASQYYPSPQITVYLEKTLDDDAAARVVGQLQAEQGVDKVNYLSRDEALGEFRNWSGFGGALDMLEENPLPAVAIVVPKLDFQSTEALNTLRDRVTRIQGVDEVRMDDSWFARLSSLTGLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDTINVQKLIGATDGFILRPFLYGGAMLGFSGAFLSLILSEILVMRLSSAVTEVAKVFGTQFELSGLGFDECLLMLIVCSMIGWVAAWLATVQHLRHFTPD
>NZ_CP043562.1|WP_002920815.1|287129_287984_+|RNA-polymerase-sigma-factor-RpoH
MTKEMQTLALAPVGNLESYIRAANTWPMLSADEERELAEKLHYQGDLEAAKKLILSHLRFVVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDMTFDMSSDDESDSQPMAPVLYLQDKTSNFADGIEDDNWEEQAANKLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
>NZ_CP043562.1|WP_149362142.1|288036_289560_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MRSLVGDLVLVRLQEERDPLLHKRLYNALRRAILDGSLAPQSRLPPSRDLAGELGVSRNTILTTYEQLLAEGYVVSRRGSGTFVAQTAPESSLTAKEERENNSLAAPTAHLSHRGQHLLGQVSASPRQWGAFIPGVPDVNAFPHPLFSKIQARISRRPKPERLSYSCNGGTPELQQALVDYLRVSRGVHCQSDQILITEGIHQAIDLVTRMLCDNGDLAWVEEPSYWGIRHVLAMNDVRAEPLTVDANGLCPPETVDDAPRLIFVTPSHQYPLGAVMSLERRQRLLALARQQGSWIVEDDYDSEFRFSGQPIPALQGLVADAPVVYIGTFSKTLYPGLRLGYVVIPRPLVSDLKHAHAELYRGGHSLIQMALAEFITAGHYSAHIRRMRLLYSRRRAFLTELIQQHCMPYALSDFSDNAGLHLILNLPAEADDVAIAKEANARHILVRPLSRYYLTAARKKGLLMGFASQPEEQMASAFSVLLGCLQTHCPQMLLLREDAEKQNAPT

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Crispr_ID: NZ_CP043562_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043562_2

1878783-1878872

Orphan

Consensus_repeat	Method
AAGCTGCAGGCTGACCTCGACGAGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043562_2

>merge|NZ_CP043562|2|1878783-1878872|CRISPRCasFinder
AAGCTGCAGGCTGACCTCGACGAGGCTAACGGCAAAGTAGAATCGCTGACCGCTGGTAATGCCAAGCTGCAGGCTGACCTCGACGAGGCT

>NZ_CP043562|2|2|1878783-1878872|CRISPRCasFinder
AAGCTGCAGGCTGACCTCGACGAGGCT	AACGGCAAAGTAGAATCGCTGACCGCTGGTAATGCC
AAGCTGCAGGCTGACCTCGACGAGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043562.1\|WP_149362298.1\|1882400_1882931_+\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917
NZ_CP043562.1\|WP_064181888.1\|1871617_1872916_+\|PBSX-family-phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|335802
NZ_CP043562.1\|WP_149362294.1\|1875727_1877107_+\|DUF2213-domain-containing-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_029503690.1\|1882975_1883260_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_048294303.1\|1871166_1871634_+\|DUF2280-domain-containing-protein	unknown	unknown	gnl\|CDD\|370794
NZ_CP043562.1\|WP_085012082.1\|1879293_1879467_+\|50S-ribosomal-protein-L13	unknown	unknown	unknown
NZ_CP043562.1\|WP_149362295.1\|1877106_1877541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_149362293.1\|1874324_1875332_+\|phage-head-morphogenesis-protein	unknown	unknown	gnl\|CDD\|213641
NZ_CP043562.1\|WP_075647501.1\|1872928_1874398_+\|DUF1073-domain-containing-protein	unknown	unknown	gnl\|CDD\|368870
NZ_CP043562.1\|WP_101825227.1\|1878913_1879294_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_149362299.1\|1883350_1883692_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_029503697.1\|1875426_1875630_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_023339711.1\|1877552_1878584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370759
NZ_CP043562.1\|WP_149362292.1\|1869008_1869458_+\|glycoside-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|381599
NZ_CP043562.1\|WP_149362296.1\|1880196_1880580_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_040246669.1\|1879466_1879829_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_038421580.1\|1880638_1881403_+\|immunoglobulin-domain-containing-protein	unknown	unknown	gnl\|CDD\|372822
NZ_CP043562.1\|WP_087823412.1\|1879831_1880200_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_149362297.1\|1881470_1882184_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043562.1\|WP_065242184.1\|1870509_1871136_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043562.1\|WP_149362298.1\|1882400_1882931_+\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	1.60969e-16
NZ_CP043562.1\|WP_064181888.1\|1871617_1872916_+\|PBSX-family-phage-terminase-large-subunit	gnl\|CDD\|335802	pfam04466, Terminase_3, Phage terminase large subunit. Initiation of packaging of double-stranded viral DNA involves the specific interaction of the prohead with viral DNA in a process mediated by a phage-encoded terminase protein. The terminase enzymes are usually hetero-oligomers composed of a small and a large subunit. This region is found on the large subunit and possess an endonuclease and ATPase activity that require Mg2+ and a neutral or slightly basic reaction. This region is also found in bacterial sequences.	2.19232e-22
NZ_CP043562.1\|WP_149362292.1\|1869008_1869458_+\|glycoside-hydrolase-family-protein	gnl\|CDD\|381599	cd00737, lyz_endolysin_autolysin, endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.	1.83731e-72
NZ_CP043562.1\|WP_023339711.1\|1877552_1878584_+\|hypothetical-protein	gnl\|CDD\|370759	pfam09950, DUF2184, Uncharacterized protein conserved in bacteria (DUF2184). This domain, found in various hypothetical bacterial proteins, has no known function.	2.12921e-06
NZ_CP043562.1\|WP_048294303.1\|1871166_1871634_+\|DUF2280-domain-containing-protein	gnl\|CDD\|370794	pfam10045, DUF2280, Uncharacterized conserved protein (DUF2280). Members of this family of hypothetical bacterial proteins have no known function.	2.71676e-57
NZ_CP043562.1\|WP_038421580.1\|1880638_1881403_+\|immunoglobulin-domain-containing-protein	gnl\|CDD\|372822	pfam13927, Ig_3, Immunoglobulin domain. This family contains immunoglobulin-like domains.	1.79922e-05
NZ_CP043562.1\|WP_149362293.1\|1874324_1875332_+\|phage-head-morphogenesis-protein	gnl\|CDD\|213641	TIGR01641, Uncharacterized_protein_MJ0329, phage putative head morphogenesis protein, SPP1 gp7 family. This model describes a region of about 110 amino acids found exclusively in phage-related proteins, internally or toward the C-terminus. One member, gp7 of phage SPP1, appears involved in head morphogenesis. [Mobile and extrachromosomal element functions, Prophage functions].	4.60125e-10
NZ_CP043562.1\|WP_075647501.1\|1872928_1874398_+\|DUF1073-domain-containing-protein	gnl\|CDD\|368870	pfam06381, DUF1073, Protein of unknown function (DUF1073). This family consists of several hypothetical bacterial proteins. The function of this family is unknown.	4.6175e-12

>NZ_CP043562.1|WP_023339711.1|1877552_1878584_+|hypothetical-protein
MLKFTPQQQKLILNARRRWDMMQRNMAAQHGFAVNDANGQFIAFDELVGNASVLPKDVWGEWDRSAITVQRDVLSVFNDLAASVSRPMALGKIVHYFMTLSDSGDVNISLDGRGKAKGDQPVMDYEGTPLPIIDSELTFGWRQMLAAQTEGYSLDSDAISNHQRKVAEKLEDMVLNGDPNINVGGATIYGLRTAPNRGTGTHGLTLNGASGAQWVAAISDLINLLHNENFYAPVTIYLNYKDWFYASVNDYAANYPKTILSRIMEIPGVAALVPASRVPTDELLGVVKRPDVVQILNGMPMTMRPKARLNPEDDYVFSVLAAAAPQFKHDANGQAGYVQLTKA
>NZ_CP043562.1|WP_149362295.1|1877106_1877541_+|hypothetical-protein
MANVIYRGPVEREPETINLPVASALNPGVAVKIASGKLAASADTTGRWFILGNRRFIGQAITTAYAANETGVAYRVEGEQEYNVRLAAAAYTVGQELTIGTGGVFKAAATGSQVVATFDEKAGRTLAAEGFADVVILSTPYAKA
>NZ_CP043562.1|WP_149362294.1|1875727_1877107_+|DUF2213-domain-containing-protein
MKLSSIHVKSLAINASNISTTTINGQEHYVIRGAVPIVDDIVMNGGLYPAEEINNSYQTMEGKLMPLPHPMVDGKYVSANDPRAINSYHVGAWAQNVSKSGDQVVMDVYINKAVAETKPDGKRLINRLDEMIAGTNTDPIHLSTGLLTNKERKSGESKQKKYSWIARNMQFDHIAILLDEPGAGTPEEGVGMFVNADGQEGEVETASLVEAANSLKDGLLNKVKFFLTHNSDASFDEIYQMLREAIRAPSGSDVYRYVVTVWPDKFIFEEGNKLFQQKYLIDDSTVTLVGDPVEVVRKPTEYEVKTNGETNPMKEKMIAALNAAGVKTEGLTDDQVWDAYNQQVKKKAGDQPGTQINSDAITAAVNLAIKPLTDEISTLKTQLQANAEKDLKTKREAVKAKFPFMTEAAINSLAGEALNDMYAQCQTSTGLNPSFQQANAENDQWKDYDLNAGIDQEKK
>NZ_CP043562.1|WP_029503697.1|1875426_1875630_+|hypothetical-protein
MSIPKPKNTVRISFTVIDENGEETLSRDYFLPFEKITQARFPALPEAAQTEAQKFHEAAVMMGCFGE
>NZ_CP043562.1|WP_149362293.1|1874324_1875332_+|phage-head-morphogenesis-protein
MIHWPMTPEQTAKVGLPIVPRSKVDPTRSAKQVSAMFRDIEDRYLGIKRALKALFDQRLTGREREVNSHNWHFLCHDHGEDMRLYQVNAGKFIYDMSAQELADLLEAVQSILDDYLLEGGEQNLWAMDYVAAEAQRGTLEAFNNLSQQSQVYASQTTLQQLLSSPGYLNQIAAARLTTFSDWKVISDTARGDLTNIITDAVARGVNPRETAGVISKRLDVSMSKAKTIAQTEQVGALRQAQWNETDWAADRLGLNTGLLWLSALKPTTRSWHASRHGKVYTTEQVRDFYAENGNRYNCYCSQIPVLLNDDGSIFNKGLADKLAKERNQWTKAESA
>NZ_CP043562.1|WP_075647501.1|1872928_1874398_+|DUF1073-domain-containing-protein
MSEQDNGLQLAVNNLATEMRRANYLNAIGIGGGNTKRPTLYQEFGYPRTITFHDFYNMYRRNAAGFAVVHRLLDGCWQDYPVIVDGDESQEAKKTNPWEKKVTRFMKKWWPKVKDADRRNMVGRYSALLLQIKDNRSWNEEVDTTLVKRLGEGALVKLIPVWEPQLTVAEWDNDRQSETFGQPKMFNFNEQPVGDEAFIGPTRGEPVHPSRVILFCEGSEDDNVLSGIPLLEAGYNKGLDLEKISGGGAEGFLKNASRQIAVEFSKETDMATLADQAKKAGYADLGEAMGDKVNKLNRGTDAAAVMQAGQMHVLSVTPGDPGPTWEVTANELAASVQIPFTILFGQQTGRLASDEDKTDWAIRRNTRRNGFLTDRITALLERFWTLGIIDPPTNGEVTISWTDLLAPGEKEKIENASKLADIVQKTSGFYGGEPPFTANELREIVGLDPLPEPKQPPNPNDKVTTDDPLADDTGADGKGGAADSSAQQG
>NZ_CP043562.1|WP_064181888.1|1871617_1872916_+|PBSX-family-phage-terminase-large-subunit
MESQVDLQIPAKLVPVFATEGIRYRGAHGGRGSAKTRTFALMSAVKAYQAAESGLSGVILCAREFMNSLEESSMEEVKQAIRSVPWLDDYFDIGEKYIRTKNRNVSYVFCGLRHNLDSIKSKARILVAWVDEAESVSATAWKKLRPTVRENGSEIWVTWNPEKDGSATDKLFRKNPPKSSMIVEMNYSDNPWFPDVLEEERLEDLENLDYADYAWIWEGAYLENSDKQVLANKYVVQSFEDDLWKKSERLLFGADFGFAKDPSTLIRMFILDNNLYIEYEAYGNGVELDDMWKFYAGKTDATPKQLEDWKVTDEAKFPGIPEARKWPIKADNSRPETISHIKGQGFNISAAQKWQGSVEDGITCLRGFKKIIIHPRCKETAKEARLYSYKTDRITGEILPVIEDKNNHCWDGVRYGLDGYIKHKAQVGAVFF
>NZ_CP043562.1|WP_048294303.1|1871166_1871634_+|DUF2280-domain-containing-protein
MAALKPEVRAFIIQELACFDTPSQIVESVQKEFKVQVTRQQVASHDPTKAAGKGLAKKWVDLFNDLRDRFLNEISDIPIANKAYRLRVLQRMSTTAENMKNIGMTAQLLEQAAKEVGEAYSNKQKVEHTSPDGSMSPRPTTIRLVGVEPTNGKSG
>NZ_CP043562.1|WP_065242184.1|1870509_1871136_+|hypothetical-protein
MNTRPYPPANFINSDNWQPYTRLIPASEVSEWVNRQILSDTGNIHNPDHAHLVDADVAFMWASGSFAKSGRIVLGQCEQVMMRAGGWQKSRMEQQMHEWFGRIPKFIITLAADYCEQCNDLEFCALVEHELYHIAQATDGYGAPKFNKETGMPVLKLRGHDVEEFVGVVRRYGASKDVQEMVDAANRPAEVAHIDVARACGTCMLKLA
>NZ_CP043562.1|WP_149362292.1|1869008_1869458_+|glycoside-hydrolase-family-protein
MQISNNGIALIKRFEGCRLTAYPDPGTGGEPWTIGYGWTGKVDGKPIKPGMKIDDATADRLLRTGVVSFDQAVSKMLKVSVTQNQYDALVSLAYNIGTRALSTSTLMKKLNAGDVKGAADAFLSWNRSGGKVMAGLTNRRKAEREVFLS
>NZ_CP043562.1|WP_101825227.1|1878913_1879294_+|hypothetical-protein
MADPITAADVQAFLGELGYSIPAALLDPILCVVNKIIPCLDGAGYDDCTAKLILMYAAALMATSSGARRIKSQGAPSGASRSFDYGDDGITWLRDSLAKLDTSGCTGELPISAGNSVGLFLVVGGC
>NZ_CP043562.1|WP_085012082.1|1879293_1879467_+|50S-ribosomal-protein-L13
MAWVSVQQRLPRTFTRVWVITDAGQQTTAYVKSDGEWFINCDRIRATGAAVLRWRDD
>NZ_CP043562.1|WP_040246669.1|1879466_1879829_+|hypothetical-protein
MSATANWSYTATATIWRRIRDADGSDTDGGGQPYGWEAPIAILCDYQGGLSAKIGDLGRELVVKNTIWTEYATAREGDYILIGASTDAAPPDEADEIRQIVQFADTFERLADDFALITGV
>NZ_CP043562.1|WP_087823412.1|1879831_1880200_+|hypothetical-protein
MGAKVRGIRQAKANLDRIIKDVQGRKVVRAIQSAMLIGSAQAALYTPIDTSTLINSQFREIMANGTRVTGRVGYSANYAVYVHDPAVKQDFTRATARKEFLTKGFEDTRSQIDAVVKKELSL
>NZ_CP043562.1|WP_149362296.1|1880196_1880580_+|hypothetical-protein
MTPPMYMRLKDLFVAEGLTAGFKVQWRQWRDTGKDADQFIVFRPSGGTNIEHDRGGDWYVMVDVISSKANPDAADAAVNAIVEYISAQSGADDCVGALRLVGNVHAPIPTEEGRLVTRLLVSCTYGE
>NZ_CP043562.1|WP_038421580.1|1880638_1881403_+|immunoglobulin-domain-containing-protein
MQGCANDTGKLIGKVAVLRMAFGCADTVPALSEWKRLGAMTTKGFDYSMNTVTSEADDTKGMVENLVNNMDVTISGEGEFRKKDKTTEVGAIAISKYIFDEVQAGRQPTVWVRFDFTGEDAGTYIMGYFNTTSWSGDFGTTDISTFSGEWKVYDADTVVFEVAGPALAFTTNLPTTKSVASGSALNMSVVVEGGTSPYTYVWKKDGTVVSGQTTATFNKASAVSGDAGVYTCEVTDSSATPVTITSASCAVTIS
>NZ_CP043562.1|WP_149362297.1|1881470_1882184_+|hypothetical-protein
MTPIKELGECVIGTGDREFFFRPSFRNMARIGEPEEIVQAFYDLCNDEATPFAQRAAEAYIRDEYSRLPDCVLRFMQSGLLSRKAIMAAHTVLTACCDDDIGDLVGWMKPGKSRKRGFVWRPGSMPPESMVIVAQNLMMHGIIGKAKVRKLQRYETNETTAEFRAADYIMAARNHFGISREEAENLTMTEFAMMINAKYPNQNGFTREEYDTVMDEDDRRWQAMMEQEHSRTTPTKN
>NZ_CP043562.1|WP_149362298.1|1882400_1882931_+|KilA-N-domain-containing-protein
MKYPTVSVNGVSVRVDGDGRYNFNDLHAAAVAKGEATESQRPSKFLRSAQVKRFIKALQSKAQKSALEQIQPLKVVKGGDEPGVWGVELLAIRYAAWIKPEFEIEVYEVFRTVVRLGIGAMSRLNKIDHIINTETKAISQCASQMAKWGVGGRKQLLHAARDRAADEVQLYLPGIA
>NZ_CP043562.1|WP_029503690.1|1882975_1883260_+|hypothetical-protein
MYLHITLNSGRTMHGGMTQSIIEVYDVSLGVRAPCKGDDDNAHPVVLWRTTGNKDCEGIMFLHELDIAVVKSTDGTVLHEWHGAKSQKQKRKSE
>NZ_CP043562.1|WP_149362299.1|1883350_1883692_+|hypothetical-protein
MTEEEWLEGLRGLPDDVILKIHFDLQEKIKKHYKLRDSGKNLEKAIHYCQQQIALAPLAMSAMKKNPGMYDNGQFFAPGHHGYRQYATILKKQKDTAGLDALLKKKKSEGWAD

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043562_1	1.1\|279023\|25\|NZ_CP043562\|CRISPRCasFinder	279023-279047	25	CP052389	Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1	228012-228036	0	1.0

1. spacer 1.1|279023|25|NZ_CP043562|CRISPRCasFinder matches to CP052389 (Klebsiella pneumoniae strain C17KP0052 plasmid pC17KP0052-1) position: , mismatch: 0, identity: 1.0

ctttatgccgttatgttgtcttttg	CRISPR spacer
ctttatgccgttatgttgtcttttg	Protospacer
*************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1844914 : 1896133

Cronobacter_phage(24.49%)

integrase,head,holin,terminase,tail,transposase

attL 1846177:1846195|attR 1862552:1862570

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004180410.1\|1844914_1846558_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	5.7e-136	50.4
1846177:1846195	attL	NA	NA	NA	NA
WP_002910717.1\|1846607_1847084_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_032441315.1\|1847182_1848109_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152313.1\|1848412_1849708_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.3e-61	36.8
WP_004175495.1\|1849722_1850529_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_021312745.1\|1850769_1852032_-\|integrase	site-specific integrase	A0A286S1S8	Klebsiella_phage	1.7e-233	95.0
WP_023283988.1\|1852074_1852320_-	excisionase family protein	A0A286S2A4	Klebsiella_phage	1.4e-35	92.1
WP_149362284.1\|1852479_1852698_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	1.9e-07	49.1
WP_149362285.1\|1852694_1853417_-	hypothetical protein	R9VWB9	Serratia_phage	1.8e-86	64.4
WP_064181876.1\|1853413_1853686_-	hypothetical protein	A0A192Y6Q6	Salmonella_phage	1.1e-23	69.3
WP_009483861.1\|1853682_1853901_-	hypothetical protein	NA	NA	NA	NA
WP_149362286.1\|1853897_1855727_-	phage N-6-adenine-methyltransferase	A0A1B0V7P0	Salmonella_phage	9.6e-116	48.7
WP_087802249.1\|1855723_1856029_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009483857.1\|1856025_1856316_-	hypothetical protein	NA	NA	NA	NA
WP_117137305.1\|1856299_1856953_-	single-stranded DNA-binding protein	A0A1W6JP21	Morganella_phage	6.7e-64	62.3
WP_149362287.1\|1857104_1857302_-	thioredoxin reductase	NA	NA	NA	NA
WP_071646962.1\|1857379_1857586_-	cell division inhibitor protein	A0A0M4S6W3	Salmonella_phage	3.1e-31	94.1
WP_001548448.1\|1858013_1858217_+	hypothetical protein	A0A192Y6Q5	Salmonella_phage	5.4e-20	74.6
WP_101816800.1\|1858256_1859048_-	hypothetical protein	NA	NA	NA	NA
WP_004178801.1\|1859254_1859374_-	hypothetical protein	NA	NA	NA	NA
WP_149362288.1\|1859396_1860086_-	helix-turn-helix domain-containing protein	Q76H56	Enterobacteria_phage	1.0e-86	70.6
WP_004178811.1\|1860190_1860424_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_001548453.1\|1860464_1860686_+	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_050849603.1\|1860819_1861548_+	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.6e-37	73.0
WP_004178817.1\|1861544_1862321_+	hypothetical protein	A0A193GYX1	Enterobacter_phage	1.1e-94	65.0
WP_004218528.1\|1862320_1862623_+	MarR family transcriptional regulator	NA	NA	NA	NA
1862552:1862570	attR	NA	NA	NA	NA
WP_149362289.1\|1863454_1864087_+	hypothetical protein	A0A0N7KZV3	Escherichia_phage	7.1e-18	36.4
WP_024622719.1\|1864259_1864547_+	hypothetical protein	NA	NA	NA	NA
WP_085858706.1\|1864546_1864804_+	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	1.1e-25	75.3
WP_149362290.1\|1864813_1865302_+	hypothetical protein	NA	NA	NA	NA
WP_101988850.1\|1865391_1865988_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	4.7e-56	53.8
WP_074376109.1\|1865993_1866164_+	NinE family protein	K7P7K0	Enterobacteria_phage	2.7e-09	63.6
WP_004141687.1\|1866156_1866447_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	5.3e-45	88.5
WP_029363688.1\|1866443_1866806_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	4.3e-52	82.4
WP_001548467.1\|1866802_1866943_+	YlcG family protein	NA	NA	NA	NA
WP_149362291.1\|1866939_1867629_+	antiterminator	I6PDF8	Cronobacter_phage	2.6e-58	53.2
WP_025987688.1\|1868716_1869022_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	8.6e-46	97.9
WP_149362292.1\|1869008_1869458_+	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	1.7e-58	71.1
WP_065242184.1\|1870509_1871136_+	hypothetical protein	I6S676	Salmonella_phage	1.1e-103	84.9
WP_048294303.1\|1871166_1871634_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	1.5e-57	73.8
WP_064181888.1\|1871617_1872916_+\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	1.8e-241	94.3
WP_075647501.1\|1872928_1874398_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	5.8e-148	56.1
WP_149362293.1\|1874324_1875332_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	3.8e-114	68.1
WP_029503697.1\|1875426_1875630_+	hypothetical protein	NA	NA	NA	NA
WP_149362294.1\|1875727_1877107_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	2.3e-130	52.7
WP_149362295.1\|1877106_1877541_+	hypothetical protein	A0A0M3LPQ2	Mannheimia_phage	3.7e-26	47.8
WP_023339711.1\|1877552_1878584_+	hypothetical protein	A0A0M3LQZ1	Mannheimia_phage	6.2e-96	52.6
WP_032428666.1\|1878623_1878911_+	hypothetical protein	A0A0M3LR32	Mannheimia_phage	1.4e-13	75.6
WP_101825227.1\|1878913_1879294_+	hypothetical protein	F1C5E2	Cronobacter_phage	5.3e-29	55.3
WP_085012082.1\|1879293_1879467_+	50S ribosomal protein L13	I6R0P9	Salmonella_phage	3.2e-13	54.4
WP_040246669.1\|1879466_1879829_+	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	1.3e-19	49.2
WP_087823412.1\|1879831_1880200_+	hypothetical protein	F1C5E3	Cronobacter_phage	5.0e-48	82.8
WP_149362296.1\|1880196_1880580_+	hypothetical protein	NA	NA	NA	NA
WP_038421580.1\|1880638_1881403_+	immunoglobulin domain-containing protein	G0ZNE6	Cronobacter_phage	3.3e-38	42.6
WP_149362297.1\|1881470_1882184_+	hypothetical protein	G0ZNE7	Cronobacter_phage	4.8e-63	54.2
WP_149362298.1\|1882400_1882931_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	5.8e-82	85.7
WP_029503690.1\|1882975_1883260_+	hypothetical protein	NA	NA	NA	NA
WP_149362299.1\|1883350_1883692_+	hypothetical protein	NA	NA	NA	NA
WP_040181307.1\|1883743_1884082_+	hypothetical protein	H6WRV3	Salmonella_phage	1.0e-31	57.3
WP_048337553.1\|1884137_1884608_+	hypothetical protein	NA	NA	NA	NA
WP_149362300.1\|1884699_1887273_+\|tail	tail protein (tape measure)	F1C5E9	Cronobacter_phage	2.9e-94	36.0
WP_085929673.1\|1887600_1888769_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	1.9e-178	96.1
WP_086074852.1\|1889157_1889577_+	hypothetical protein	F1C5F0	Cronobacter_phage	1.7e-23	44.7
WP_032419293.1\|1889576_1890047_+	hypothetical protein	R9TPR6	Aeromonas_phage	9.6e-28	40.4
WP_149362301.1\|1890043_1890439_+	hypothetical protein	F1C5F2	Cronobacter_phage	2.1e-36	54.8
WP_149362302.1\|1890425_1892903_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	1.8e-197	45.3
WP_149362303.1\|1894988_1895789_+	hypothetical protein	NA	NA	NA	NA
WP_065801522.1\|1895893_1896133_+	hypothetical protein	K7P7N3	Enterobacteria_phage	1.3e-17	53.2

DBSCAN-SWA_2

2529824 : 2540711

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032424949.1\|2529824_2532932_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004176258.1\|2532986_2534252_+	MFS transporter	NA	NA	NA	NA
WP_149362387.1\|2534282_2535371_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.8e-210	99.7
WP_004176262.1\|2535457_2535718_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620095.1\|2536015_2536876_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2536896_2537658_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_117022884.1\|2537918_2538821_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.4e-159	99.3
WP_004224682.1\|2538832_2540098_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_002210516.1\|2540090_2540711_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_3

2932141 : 2940065

Phage_21(37.5%)

integrase

attL 2926812:2926825|attR 2942764:2942777

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2926812:2926825	attL	NA	NA	NA	NA
WP_004892953.1\|2932141_2932294_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_149362435.1\|2932614_2932938_-	hypothetical protein	NA	NA	NA	NA
WP_032413624.1\|2932943_2933636_-	EAL domain-containing protein	NA	NA	NA	NA
WP_149362658.1\|2935059_2935293_+	hypothetical protein	M1FN76	Enterobacteria_phage	1.4e-27	81.8
WP_004864289.1\|2935914_2936430_+	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	2.9e-70	76.4
WP_040176408.1\|2936426_2936822_+	hypothetical protein	A0A077K9V6	Edwardsiella_phage	1.0e-06	33.8
WP_040176407.1\|2936814_2937033_+	hypothetical protein	G8C7S3	Escherichia_phage	3.5e-09	53.4
WP_071953772.1\|2937032_2937305_+	hypothetical protein	K7PKM4	Enterobacterial_phage	9.8e-09	39.4
WP_000089156.1\|2937333_2937570_+	excisionase	NA	NA	NA	NA
WP_000741346.1\|2937559_2938702_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	9.1e-173	82.2
WP_004150800.1\|2938814_2940065_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
2942764:2942777	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3213035 : 3222498

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004209699.1\|3213035_3214757_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3214801_3215503_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3215856_3216075_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_149362480.1\|3216194_3218474_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.1e-165	42.0
WP_002896520.1\|3218504_3218822_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3219147_3219369_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004147781.1\|3219445_3221386_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	5.0e-38	41.0
WP_002896440.1\|3221382_3222498_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_5

4318391 : 4372379

Sodalis_phage(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024264570.1\|4318391_4319330_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.0e-68	53.7
WP_085920927.1\|4319469_4320501_-	SIS domain-containing protein	NA	NA	NA	NA
WP_020802795.1\|4320497_4321559_-	SIS domain-containing protein	M1I2B0	Paramecium_bursaria_Chlorella_virus	3.8e-08	23.4
WP_012737365.1\|4321571_4322411_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_002887608.1\|4322400_4323180_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002887607.1\|4323196_4323667_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_004888687.1\|4323681_4324104_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_149362579.1\|4324204_4326970_-	PRD domain-containing protein	NA	NA	NA	NA
WP_149362580.1\|4327107_4328553_-	tagaturonate reductase	NA	NA	NA	NA
WP_004151386.1\|4328564_4329587_-	zinc-binding alcohol dehydrogenase family protein	A0A2K9L7I1	Tupanvirus	1.7e-13	27.3
WP_004182856.1\|4329723_4330638_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_016946270.1\|4330817_4332179_+	MFS transporter	NA	NA	NA	NA
WP_021313595.1\|4332182_4333019_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002887560.1\|4333051_4333585_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002887559.1\|4333654_4334518_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_004178521.1\|4334514_4335114_-	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA
WP_032437850.1\|4335100_4335973_-	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA
WP_004151389.1\|4335982_4337470_-	sodium:solute symporter family protein	NA	NA	NA	NA
WP_004177530.1\|4337655_4338048_-	RidA family protein	NA	NA	NA	NA
WP_149362581.1\|4338058_4339498_-	amidohydrolase family protein	NA	NA	NA	NA
WP_004230613.1\|4339475_4339655_+	hypothetical protein	NA	NA	NA	NA
WP_002887552.1\|4339698_4340919_+	amino acid deaminase	NA	NA	NA	NA
WP_032415912.1\|4341123_4342140_-	Ldh family oxidoreductase	NA	NA	NA	NA
WP_002887503.1\|4342750_4343191_-	homoprotocatechuate degradation operon regulator HpaR	NA	NA	NA	NA
WP_004146085.1\|4343477_4344110_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA
WP_021313599.1\|4344106_4344871_+	2-hydroxyhepta-2,4-diene-1,7-dioate isomerase	NA	NA	NA	NA
WP_002887494.1\|4344867_4346334_+	5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase	NA	NA	NA	NA
WP_149362582.1\|4346335_4347193_+	3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA	NA	NA	NA
WP_004151392.1\|4347202_4347583_+	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA
WP_002887487.1\|4347691_4348495_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA
WP_002887479.1\|4348505_4349303_+	4-hydroxy-2-oxoheptanedioate aldolase	NA	NA	NA	NA
WP_002887477.1\|4349324_4350683_+	4-hydroxyphenylacetate permease	NA	NA	NA	NA
WP_004177537.1\|4350692_4351583_+	4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA	NA	NA	NA
WP_019725350.1\|4351808_4353371_+	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA	NA	NA	NA
WP_002887467.1\|4353390_4353903_+	4-hydroxyphenylacetate 3-monooxygenase reductase subunit	NA	NA	NA	NA
WP_004118209.1\|4355306_4355570_-\|transposase	transposase	NA	NA	NA	NA
WP_004118208.1\|4355584_4355848_+	hypothetical protein	NA	NA	NA	NA
WP_004118205.1\|4356069_4356351_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000350436.1\|4356385_4356955_+	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004118202.1\|4357060_4359910_+	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	6.9e-129	41.2
WP_001446316.1\|4359909_4360101_+	hypothetical protein	NA	NA	NA	NA
WP_023205099.1\|4360847_4360988_+\|protease	ATP-dependent metalloprotease FtsH	NA	NA	NA	NA
WP_004118198.1\|4361075_4361534_+	small heat shock protein sHSP20-GI	NA	NA	NA	NA
WP_032238607.1\|4361556_4362471_+	heat resistance protein YfdX1	NA	NA	NA	NA
WP_047670347.1\|4362573_4363461_+	heat resistance protein YfdX2	NA	NA	NA	NA
WP_001090779.1\|4363550_4364162_+	heat resistance membrane protein HdeD-GI	NA	NA	NA	NA
WP_047670350.1\|4364241_4365387_+	hypothetical protein	NA	NA	NA	NA
WP_000786814.1\|4365376_4365817_+	heat resistance system thioredoxin Trx-GI	A0A1J0GW78	Streptomyces_phage	5.8e-11	37.2
WP_023326110.1\|4365820_4367530_+	heat resistance system K+/H+ antiporter KefB-GI	NA	NA	NA	NA
WP_001514138.1\|4367532_4368030_+	heat resistance protein PsiE-GI	NA	NA	NA	NA
WP_032238623.1\|4368007_4368973_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_149362583.1\|4368997_4370149_+\|protease	trypsin-like serine protease	A0A1B1IT49	uncultured_Mediterranean_phage	5.8e-26	30.0
WP_114456289.1\|4371455_4372379_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	2.7e-175	99.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043562

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection