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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP038104 Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa9-like, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP038102 Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 chromosome, complete genome 11 crisprs WYL,cas3,csa3,DEDDh,DinG,TnsE_C 0 1 9 0
NZ_CP038105 Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pRAS3-3432, complete sequence 0 crisprs cas14j 0 0 0 0
NZ_CP038103 Aeromonas salmonicida subsp. salmonicida strain SHY16-3432 plasmid pAsa5-3432, complete sequence 0 crisprs NA 0 0 2 0

Results visualization

1. NZ_CP038102
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_1 1539-1625 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_2 91737-91830 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_3 174435-174577 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_4 699877-699976 Unclear NA
1 spacers
cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_5 946441-946553 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_6 1298647-1298737 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_7 1361410-1361548 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_8 1753857-1753952 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_9 2978625-2978748 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_10 3443867-3444011 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038102_11 4466005-4466103 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP038102_7 7.1|1361463|33|NZ_CP038102|CRISPRCasFinder 1361463-1361495 33 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 99642-99674 8 0.758

1. spacer 7.1|1361463|33|NZ_CP038102|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 8, identity: 0.758

gatacccagcagctcaacgtcgaagatcagcac	CRISPR spacer
gattgacagtagctctacgtcgaagatcagagt	Protospacer
***   ***.***** ************** ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 578189 : 691015 115 Aeromonas_virus(66.0%) portal,tail,head,transposase,integrase,terminase,tRNA,holin,capsid attL 599427:599444|attR 670977:670994
DBSCAN-SWA_2 733670 : 741867 6 Stenotrophomonas_phage(16.67%) NA NA
DBSCAN-SWA_3 860915 : 870839 10 uncultured_Mediterranean_phage(25.0%) tRNA NA
DBSCAN-SWA_4 1298819 : 1354130 49 Morganella_phage(16.67%) transposase,tRNA,integrase,capsid attL 1299897:1299956|attR 1354094:1355257
DBSCAN-SWA_5 1771189 : 1802270 50 Aeromonas_phage(77.14%) NA NA
DBSCAN-SWA_6 1971291 : 2042085 52 uncultured_Caudovirales_phage(37.5%) transposase,plate,tRNA NA
DBSCAN-SWA_7 2057485 : 2067346 12 Yersinia_phage(14.29%) transposase,protease,tRNA NA
DBSCAN-SWA_8 2941453 : 3023108 80 Aeromonas_virus(73.17%) portal,tail,transposase,head,integrase,terminase,tRNA,holin,capsid attL 2990603:2990624|attR 3026880:3026901
DBSCAN-SWA_9 4624583 : 4683521 46 Indivirus(18.18%) transposase,integrase,protease attL 4642819:4642836|attR 4685333:4685350
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP038103
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4245 : 55706 46 uncultured_virus(28.57%) transposase NA
DBSCAN-SWA_2 87634 : 118764 26 Escherichia_phage(42.86%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage