CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043811	Haemophilus influenzae biotype aegyptius strain HE40/F3043 chromosome, complete genome	1 crisprs	DEDDh,cas14j	0	0	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043811_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043811_1

1740918-1741007

Orphan

Consensus_repeat	Method
ACGCCACGTTTTTAATTAGTTGTAGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043811_1

>merge|NZ_CP043811|1|1740918-1741007|CRISPRCasFinder
ACGCCACGTTTTTAATTAGTTGTAGGGTGGGCATAAGCCCACGTGTTTGTCATATACCTCCACGCCACGTTTTTAATTGGTTGTAGGGTG

>NZ_CP043811|1|1|1740918-1741007|CRISPRCasFinder
ACGCCACGTTTTTAATTAGTTGTAGGGTG	GGCATAAGCCCACGTGTTTGTCATATACCTCC
ACGCCACGTTTTTAATTGGTTGTAGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043811.1\|WP_151230767.1\|1743133_1745647_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP043811.1\|WP_151230761.1\|1732683_1733520_+\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP043811.1\|WP_013527770.1\|1748486_1749575_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|223105
NZ_CP043811.1\|WP_013527773.1\|1751682_1752315_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP043811.1\|WP_006996423.1\|1730246_1731767_-\|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl\|CDD\|224671
NZ_CP043811.1\|WP_013527764.1\|1741111_1742431_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043811.1\|WP_006995342.1\|1735037_1735883_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043811.1\|WP_006996424.1\|1732209_1732614_+\|DNA-binding-protein-H-NS	unknown	unknown	gnl\|CDD\|225468
NZ_CP043811.1\|WP_041175201.1\|1747044_1747710_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043811.1\|WP_005641687.1\|1735939_1736059_-\|Com-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226843
NZ_CP043811.1\|WP_013527772.1\|1751063_1751681_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224047
NZ_CP043811.1\|WP_013527769.1\|1747922_1748417_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP043811.1\|WP_151230814.1\|1739253_1739847_-\|DUF2313-domain-containing-protein	unknown	unknown	gnl\|CDD\|226301
NZ_CP043811.1\|WP_151230766.1\|1742454_1743120_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP043811.1\|WP_151230765.1\|1739846_1740869_-\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|225836
NZ_CP043811.1\|WP_151230763.1\|1736715_1737342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043811.1\|WP_151230764.1\|1737354_1739250_-\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|367479
NZ_CP043811.1\|WP_050822861.1\|1745753_1746452_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_CP043811.1\|WP_013527771.1\|1749714_1750905_+\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP043811.1\|WP_151230762.1\|1736234_1736723_-\|enoyl-CoA-hydratase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP043811.1\|WP_151230767.1\|1743133_1745647_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP043811.1\|WP_151230761.1\|1732683_1733520_+\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	1.2769e-174
NZ_CP043811.1\|WP_013527770.1\|1748486_1749575_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|223105	COG0026, PurK, Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism].	4.66126e-166
NZ_CP043811.1\|WP_013527773.1\|1751682_1752315_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	4.47968e-14
NZ_CP043811.1\|WP_006996423.1\|1730246_1731767_-\|Na+/H+-antiporter-NhaC-family-protein	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	1.04514e-108
NZ_CP043811.1\|WP_013527764.1\|1741111_1742431_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	4.51439e-07
NZ_CP043811.1\|WP_013527772.1\|1751063_1751681_-\|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224047	COG1122, CbiO, ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism].	2.09413e-71
NZ_CP043811.1\|WP_006996424.1\|1732209_1732614_+\|DNA-binding-protein-H-NS	gnl\|CDD\|225468	COG2916, Hns, DNA-binding protein H-NS [General function prediction only].	9.65386e-40
NZ_CP043811.1\|WP_041175201.1\|1747044_1747710_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	4.44216e-16
NZ_CP043811.1\|WP_151230765.1\|1739846_1740869_-\|baseplate-J/gp47-family-protein	gnl\|CDD\|225836	COG3299, XkdT, Uncharacterized homolog of phage Mu protein gp47 [Function unknown].	3.38825e-67
NZ_CP043811.1\|WP_151230814.1\|1739253_1739847_-\|DUF2313-domain-containing-protein	gnl\|CDD\|226301	COG3778, COG3778, Uncharacterized protein conserved in bacteria [Function unknown].	1.7531e-35
NZ_CP043811.1\|WP_151230766.1\|1742454_1743120_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.32735e-24
NZ_CP043811.1\|WP_005641687.1\|1735939_1736059_-\|Com-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|226843	COG4416, Com, Mu-like prophage protein Com [General function prediction only].	1.0616e-11
NZ_CP043811.1\|WP_013527769.1\|1747922_1748417_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	7.05516e-89
NZ_CP043811.1\|WP_151230764.1\|1737354_1739250_-\|tail-fiber-protein	gnl\|CDD\|367479	pfam03406, Phage_fiber_2, Phage tail fibre repeat. This repeat is found in the tail fibers of phage. For example protein K. The repeats are about 40 residues long.	2.03071e-13
NZ_CP043811.1\|WP_050822861.1\|1745753_1746452_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	3.06272e-75
NZ_CP043811.1\|WP_013527771.1\|1749714_1750905_+\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0

>NZ_CP043811.1|WP_151230765.1|1739846_1740869_-|baseplate-J/gp47-family-protein
MRDVQSLEASADVSIDSDYYARASSLAAVAEGIYAHQKWIIKQFFPDTADTGFLEKHAGLRGIRRRNATYASGRGATVTGTPDAVLKAGLQIKTDDNRFYETTESAVISASGSAVVAVRSLATGASQNIKTAIKANFMAAPLGVQSDVVLNDVIGATDAESDASLLERLLEIIRRPPAGGNRYDYRTWALSVDGVDAAYVYPLRRGLGTVDIAITSNNDVPSDETIRRCQEYIDDVRPVTARESKVVKPDVTKVNFNIQVKISGVTLPEIKAAISTALSDYFNTLIPGDDLIVSQCEAVVNNLVGVVDRKFTAPITNLKADVRTKIEWFRLGQITVTEMA
>NZ_CP043811.1|WP_151230814.1|1739253_1739847_-|DUF2313-domain-containing-protein
MQTDHKKVLAKLYPPISYDVNGERFLAQCEVDGNVFDRLQKSAVDLLQIIEPATSNTMLSDWERLCDIKTDYSNNYQARVKRVIAKLNAIGGLSIPYFKRIAESIGYRIEIKEFSPLANDLPTTGDLAQFRNEARDNLIFMWRVSVLNGDDNIVYFRAGSSFAGNHLVEFGDPIIEEFFRDLKPAHTYCYFAYQTGS
>NZ_CP043811.1|WP_151230764.1|1737354_1739250_-|tail-fiber-protein
MKSLMPKIDSNDGLFHNGNPATGEQGTRVTDTWLNNLQDRVRDVQAEAHYVLQKAGFTPKAETQTQLYQAIVKIIDDNRKTASLTQKGEVQLSSSTNSNSETQAATSKAVKTAYDKAVDAKTTVDRLQLNVSKNYIPNSKKSSAVNSNSADTVATSAAVKTAYDLANSKQSPATTLAGYGIRNFKVEPFAGDINTLKTDGIYAITQASRSRNLPVSTSCHIQVIAGGDSSWCRQFAYVAYSTDMYERHQTSYQTDSWSAWKKLNTDGIPIGAVVSFPRAVTNPVGFLKANGTTFNQQTFPDLYRVLGSNQLPDLTRSDVGMTAYFAVDNIPAGWIAFDEIATQVTEQRYPELYRHLVGQYGSIDSVPKATDRFLRNAGNGLSVGQTQEDELKRHVHRVPIDYDSWFDHSSQGRNNSYFDYTTFAQSSDLWSTLGYDNADGDNGFVSPKDTSQMATGGDETRPKSLILKLCIKAINSLDDVVFWIKSHGEVTNAGALDAGRLAQGLQHKADRNHTHTVSQITDFNQSVREIVTQSITQGFTQNLAETGWCKLPNEMILQWGKFNKGHGFVSDEQRLVTFPISFPNKVLFVGLTEFTNAWSYSTTVENRQRMTNSGFYVISQRNDSMYFALGF
>NZ_CP043811.1|WP_151230763.1|1736715_1737342_-|hypothetical-protein
MYYYDKKTNGFLVQGVNLIPEGAINITDEYYQQLLSGQSQGKQIIADKTGNPVLIDPQPSAAHQLNLDTLRWEISAEKQTALLAETQTRLVANIDEHAAKIYSTWTRFESEYRERQAAAEAFKAANYEGECSRYISDFAQRARLDNKTATNLILTQAAGLEKLQMELANQRMRKYELQAPNLTLEQLQSIHDDIIKQMDNLMEAYQNG
>NZ_CP043811.1|WP_151230762.1|1736234_1736723_-|enoyl-CoA-hydratase
MAKVYLAMYKHKRDWRKESVKAIADRITRFCTKGKYSHCEIAIERIEFGNGHHYEHATVYDCYSSSVQDGGVRCKQIDVSDNTKWDLIPLDGVTEEQIKAYFDRTLGCKYDWWGALGIVLGIKQKRSKYFCSEWCFNAICGSERGWRFSPNQLAAIFNKEKS
>NZ_CP043811.1|WP_005641687.1|1735939_1736059_-|Com-family-DNA-binding-transcriptional-regulator
MQSIKAIRCTFCNKLLAKVGIVGYLEIKCPRCKTVNTTR
>NZ_CP043811.1|WP_006995342.1|1735037_1735883_-|hypothetical-protein
MGNQNTFKQAPLPFIGQKRMFLKHFETVLNENIKGDGEGWTIIDTFGGSGLLSHAAKVIKPKAHVIYNDFDSYAERLAYINDTNALRTQIFAKIGNATPKNKRLPKSLKAEIIKIIDQFKGYKDLNCLTSWLLFSGQQVSSLDELYKKDFWHCVRLSDYPSAEGYLDGVEVIRESFHTLLPKFTDNPKALFVLDPPYLCTKQESYKQATYFDLIDFLRLVNITRPPYIFFSSTKSEFVRFIEYMVDDKVHNWQTFDNAERIVVNASASYSGKYEDNMVYKF
>NZ_CP043811.1|WP_151230761.1|1732683_1733520_+|formyltetrahydrofolate-deformylase
MIEKKILLTDCPDDKGLIAKITNICYKHQLNILHNNEFVDFETKHFFMRTELEGIFNEATLLEDLKYSLPEETNCRLIGTQRKRIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNHDNLRELVERFNIPFHLVSHENLTHVEHDKLLAEKIDEYTPDYIVLAKYMRVLNPEFVARYPNRVINIHHSFLPAFIGAKPYQQAYERGVKIIGATAHFINNELDQGPIIMQNVINVDHTYNAEAMMRAGRDVEKTVLSRALDLALHDRIFVYKNKTVVL
>NZ_CP043811.1|WP_006996424.1|1732209_1732614_+|DNA-binding-protein-H-NS
MNELVRGLTNLRSLRAAVRELTLEQAENALEKLQTAIEEKRANEAELIKAETERKERLAKYKELMEKEGITPEELHEIFGTKTVSIQAKRAPRPAKYAFIDENGEHKTWTGQGRTPRPIQNALNKGKSLSDFEI
>NZ_CP043811.1|WP_006996423.1|1730246_1731767_-|Na+/H+-antiporter-NhaC-family-protein
MELIDFSSSVWSIVPALLAIILAIATRRVLVSLSAGIIIGSLMLSDWQIGSAFNYLVKNVVSLVYADGEINSNMNIVLFLLLLGVLTALLTVSGSNRAFAEWAQSRIKGRRGAKLLAASLVFVTFIDDYFHSLAVGAIARPVTDRFKVSRAKLAYILDSTAAPMCVMMPVSSWGAYIITLIGGLLATYSITEYTPIGAFVAMSSMNFYAIFSIIMVFFVAYFSFDIASMVRHEKLALKNTEDQLEEETGTKGQVRNLILPILVLIIATVSMMIYTGAEALAADGKVFSVLGAFENTVVGTSLVVGGFCSIIISTLLIILDRQVSVPEYARSWIVGIKSMSGAIAILFFAWTINKIVGDMQTGKYLSSLVSGNIPMQFLPVILFVLGAAMAFSTGTSWGTFGIMLPIAAAMAANVAPELLLPCLSAVMAGAVCGDHCSPVSDTTILSSTGAKCNHIDHVTTQLPYAATVATATSIGYIVVGFTYSGLAGFAATAVSLIVIVFAVKKR
>NZ_CP043811.1|WP_013527764.1|1741111_1742431_-|type-1-fimbrial-protein
MNKKSYINHYLTLFKVTTLLFTLSSNPVWANIKTANAVSSGRSPITRTYTFSGDTQMKVTSSQPAYIVFSKARDNPNSGHFQSSEVNAQPNSLAPFNEWIYTQSLTEIGYSFAGFSCSSHPCPQMQLPLLLYPDNAYLNPTSQKDDDGGIIFALRNKPNVGISFQVGVRTNNIQEWVSVTSNSNATFLKVLRAYFNSQDKTLFDLRAKFHLLTDFSSLGNDEVINSMNVRIGEIKLDTWRSEPKSFFSTKYVVQDVGKISIFFQIPKIILKKQQRQCILNSTYHNIPVSLKSVKKREFETNTEIEGGKFKLRVNCGNTTYNTANGKWLFPLVKLTFTGENGTSNNGTNDLLRTVTGSGQAEGVSLKIKRENGTHTVKYGADSANMGNAGQFELHKQPTSVGGDQSAEETFKVYYVKDPARGSLTEGKVNAAATFTMSYQ
>NZ_CP043811.1|WP_151230766.1|1742454_1743120_-|type-1-fimbrial-protein
MQKTPKKLTALFHQKSTATCSGANYSGANYSGSKCFRFHRLALLACVALLDCIVALPAYAYDGRVTFQGEILSDGTCKIETDSQNRTVTLPTVGKANLRLVGQTAAPVPFSITLKECNATDAIKANLLFSGAATGQIYLSNATGNGKATNVGIQIVKADGAGTLIKVDGSQANSEKAPDTGKEQNATVIQPRFDYFAHYYATGAATAGDVEATATFQVQYK
>NZ_CP043811.1|WP_151230767.1|1743133_1745647_-|fimbrial-biogenesis-outer-membrane-usher-protein
MKTKNFPLNKIAFACTLLLANPVAWAEDQFDASLWGGGSVLGIDFARFNVKNAVLPGRYEAQIYVNNEEKGESDIIFADNPATGRAELCFTPKLQEMLDLMDEAIVKSPNAEDDTCVFASDAIPQGTFEYQSSEMKLKLELPQALTIRRPRGYIAPSRWQTGTNAAFANYDINYYRSDNPEVKSKSLYVGLRSGVNFGNWALRHNGSFSRFENQSSSGFTDKGKNHYERGDTYLQRDFALLRGNVTVGDFFSTARIGENFGMRGLRIASDDRMLAPSQRGFAPVVRGVANTNAKVSIKQNGYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESDGKVRSFIVPFSNLAPLMRVGHLRYQLAGGRYRIDSRTFDERVLQGVLQYGLTNHLTLNSSLLYTRHYRAGLFGFGLNTPIGAFSADATWSHAEFPLKKVSKNGYSLHGSYSINFNEIGTNLTLAAYRYSSRDFYTLSDTIGLNRTFKQFSGAYLPEIYRPKNQFQVSLSQSLGNWGNLYLSGQTYNYWEKRGTNTQYQLAYANRFHILNYSINLSQSIDKETGKRDNSIYLSLSLPLGDNHSADSSYSRSGNDINQRLGVNGSFGERHQWSYGINASRNNQGYRSYDANLAHNNSIGSYRASYSRDSLKNRSTSLGASGAVVAHKHGITLSQPVGESFAIIHAKDAAGAKVESGANVSLDYFGNAVVPYTSPYEINYIGINPSDAEANVEFEATERQIIPRANSISLVDFRTGKNTMVLFNLTLPNGEPVPMASTAQDSEGAFVGDVVQGGVLFAGKLTRPQGELHVKWGERESEQCRFHYQVDLDNKQLQSQDMLCQPQK
>NZ_CP043811.1|WP_050822861.1|1745753_1746452_-|fimbria/pilus-periplasmic-chaperone
MLKKTLLFFTALCAFSANANVIITGTRVIYPAGQKNVIVKLENNDDSAALVQAWIDNGNPNADPKYTKTPFVITPPVARVEAKSGQSLRITFTGSEPLPDDRESLFYFNLLDIPPKPDAEFLAKHGSFMQIAIRSRLKLFYRPAKLSLDPFDAMKKVVFKATPKGVLVDNQTPYYMNYIGLLHQNKPAKNVKMVAPFSQAVFEAKGVRSGDKLKWVLVNDYGADQEGDAIAQ
>NZ_CP043811.1|WP_041175201.1|1747044_1747710_+|type-1-fimbrial-protein
MEQFIMKKTLLGSLILLAFAGNVQAAANADTKGTVTFFGKVVENTCQVKTDHKNLSVVLNDVGKNSLKDKGNTAMPTPFTITLQNCNPTAANGSANKANKVGLYFYSWENADKENNFTLKNKISTSNDFATMVNIQLMESNGTKEIKVVGKETEDFVHKNATGAGVALTQTHPDNDHISGSTQLTSVTGELPLHFIAQYYSLGSTTAGKVQSSVDFQIAYE
>NZ_CP043811.1|WP_013527769.1|1747922_1748417_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSKTAQIAVVMGSKSDWATMQEATQILDELNVPYHVEVVSAHRTPDKLFEFAENAQKNGYKVIIAGAGGAAHLPGMIAAKTLVPVLGVPVKSSMLSGVDSLYSIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAGWDLELLSRLQSFRESQTHAVLDNPDPRT
>NZ_CP043811.1|WP_013527770.1|1748486_1749575_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MQNSTLYPTVYVLGNGQLGRMLHYAGAPLDIYVEPLAFNAPVFDLPENAIITAEIERWEKTPLTELLGNHKNFVNQHVFGLLADRFTQKSLLDELNLSTSPWCLLKDKTQWNDVFQTVGEKVVVKRRTGGYDGRGQWIISDENKADITDDLFSEVIAEKFIPFDYEVSIVGARFKNGEKRFYPVTHNLQQNGILRYSVVDIAFPQQSAQQKQAEAMLGKIMDKLGYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRTLLDLPTPELQTFAPSVMINLIGTNHNPKWLNTPFAQLHWYGKEVRTGRKVGHINLSHPNKAVIIQQLEKLRTELPEDYQSGLNWVIEKLK
>NZ_CP043811.1|WP_013527771.1|1749714_1750905_+|aspartate/tyrosine/aromatic-aminotransferase
MFEHIKAAPADPILGLGEAFKSETRENKINLGIGVYKDAQGTTPIMRAVKEAEKRLFDKEKTKNYLTIDGIADYNEQTKALLFGKDSEIIKSNRARTVQSLGGTGALRIAAEFIKRQTKAQNVWISTPTWPNHNAIFNAVGMTIREYRYYDAERKALDWEHLLEDLSQASEGDVVLLHGCCHNPTGIDPTPEQWQELAALSAKNGWLPLFDFAYQGLANGLDEDAYGLRAFAANHKELLVASSFSKNFGLYNERVGAFTLVAENAEIASTALTQVKSIIRTLYSNPASHGGATVATVLNDTQLRQEWENELTEMRERIKKMRHLFVQLLKEYGAEQDFSFIMEQNGMFSFSGLTGEQVDRLKEEFAIYAVRSGRINVAGITEDNIRYLCESIVKVL
>NZ_CP043811.1|WP_013527772.1|1751063_1751681_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MLAINNLYIERNGRAIIQDLSFTLEGQKRLFVQGEIGSGKTTLLLALLGFVPVTKGEIKLFGKVCRKEKDFVPFRGTIGICFQNADDQLFGPTVLDDIAFGPLNQNVPREQAYHIAEQQLERLGITGLKDRMVHTLSGGEKNFTALAGVLAMQPKILLLDEPTNGLDRKNTEKLTALLRELSLPILISSHHHGFINELATEIISL
>NZ_CP043811.1|WP_013527773.1|1751682_1752315_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MKIHRLFQPHFRLIYLFIWGLIISGLSDLTWLIPFNLLAVSLFFISLQFSQKSFLPYLKRWFALIIFIALMWATLSWQIGENGIELNFQGIELAEKLSLRTHLLLISLWLFLWNINDGVLVQAIGKLPLPEKLIQLFVLTVRYIALLGELRQKMDIAMRARGFRPGLNRRTLYVAAQSVALLLIHALLKAETVQMALKCRGFQFGKKREK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

106760 : 116109

Vibrio_phage(16.67%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006995691.1\|106760_108884_+	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	2.0e-258	62.1
WP_006995688.1\|110023_111403_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	3.9e-53	29.7
WP_005652519.1\|111505_112015_+	peptidyl-prolyl cis-trans isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	7.2e-13	32.9
WP_006995687.1\|112069_112858_+	TatD family deoxyribonuclease	NA	NA	NA	NA
WP_006995686.1\|112919_113177_+	hypothetical protein	NA	NA	NA	NA
WP_032826269.1\|113187_113454_+	hypothetical protein	NA	NA	NA	NA
WP_005689970.1\|113512_113836_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	9.8e-16	42.4
WP_006995684.1\|113955_114951_-	2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	1.1e-65	39.6
WP_081457578.1\|114963_116109_-	methionine biosynthesis PLP-dependent protein	A0A141ZJM2	Faustovirus	3.6e-12	26.5

DBSCAN-SWA_2

446635 : 523056

Mannheimia_phage(51.43%)

protease,portal,head,tRNA,integrase,capsid,plate,terminase,tail

attL 487707:487766|attR 523057:523118

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006995391.1\|446635_448354_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_006995390.1\|448438_450298_-	DNA helicase RecQ	A0A1V0SBK0	Catovirus	1.9e-87	37.1
WP_005655473.1\|450299_450605_-	iron donor protein CyaY	NA	NA	NA	NA
WP_006995389.1\|450865_452113_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_005652269.1\|452318_452945_+	response regulator	NA	NA	NA	NA
WP_005648547.1\|453006_453447_-	DUF2489 domain-containing protein	NA	NA	NA	NA
WP_006995388.1\|453450_454011_-	Der GTPase-activating protein YihI	NA	NA	NA	NA
WP_006995387.1\|454124_454403_-	hypothetical protein	NA	NA	NA	NA
WP_006996628.1\|460569_461124_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_013527340.1\|461299_462337_+	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	1.2e-33	39.5
WP_006995384.1\|462326_463016_+	ABC transporter permease	NA	NA	NA	NA
WP_005654466.1\|463054_463876_+	methionine ABC transporter substrate-binding protein MetQ	NA	NA	NA	NA
WP_005672324.1\|464177_464945_-	DeoR/GlpR family transcriptional regulator	NA	NA	NA	NA
WP_006995381.1\|464974_465553_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_013527342.1\|466242_469014_-	RNA polymerase-associated protein RapA	A0A1B1IUI1	uncultured_Mediterranean_phage	3.0e-20	40.0
WP_005661551.1\|469208_469958_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_151230664.1\|470187_471957_+	L-fucose isomerase	NA	NA	NA	NA
WP_013527343.1\|472029_473442_+	L-fuculokinase	NA	NA	NA	NA
WP_005648572.1\|473455_473890_+	L-fucose mutarotase	NA	NA	NA	NA
WP_006995376.1\|473909_474560_+	L-fuculose-phosphate aldolase	NA	NA	NA	NA
WP_005668621.1\|474598_475885_+	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_005654480.1\|476412_477261_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	6.1e-33	39.7
WP_006995374.1\|477398_478784_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_006995373.1\|478922_479738_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
WP_005694542.1\|479747_480551_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_006995372.1\|480567_481575_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_151230665.1\|481648_484180_-	class I adenylate cyclase	NA	NA	NA	NA
WP_006995370.1\|484484_485696_+	uroporphyrin-III C-methyltransferase	NA	NA	NA	NA
WP_006995369.1\|485706_486993_+	heme biosynthesis protein HemY	NA	NA	NA	NA
487707:487766	attL	NA	NA	NA	NA
WP_005641196.1\|488267_489278_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	3.5e-120	62.1
WP_041175147.1\|489287_491063_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	1.9e-217	65.4
WP_086935158.1\|491314_491497_-	hypothetical protein	NA	NA	NA	NA
WP_006995363.1\|491490_492135_+	phage repressor protein	D0UIM5	Aggregatibacter_phage	5.3e-29	35.0
WP_006995362.1\|492312_493128_+\|capsid	GPO family capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	1.2e-62	60.7
WP_006995361.1\|493149_494199_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	4.4e-89	51.6
WP_013527346.1\|494210_494861_+\|terminase	terminase	Q19US0	Mannheimia_phage	9.1e-45	45.5
WP_006995358.1\|495153_495660_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	1.3e-33	51.0
WP_005668467.1\|495659_495869_+\|tail	tail protein	NA	NA	NA	NA
WP_006995357.1\|495870_496092_+	hypothetical protein	NA	NA	NA	NA
WP_151230666.1\|496583_496934_+	chemotaxis protein	NA	NA	NA	NA
WP_005672206.1\|496848_497112_+	hypothetical protein	NA	NA	NA	NA
WP_006995354.1\|497108_497324_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	5.3e-10	46.6
WP_006995353.1\|497320_497791_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	5.6e-28	46.0
WP_013527347.1\|497790_498249_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	2.3e-26	50.4
WP_006995351.1\|498226_498499_-	hypothetical protein	NA	NA	NA	NA
WP_013527348.1\|498568_501304_+\|tail	phage tail tape measure protein	A0A0A7NRZ9	Enterobacteria_phage	1.8e-86	36.1
WP_006995348.1\|501525_501978_+	hypothetical protein	NA	NA	NA	NA
WP_005668437.1\|502078_502678_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	7.1e-44	66.0
WP_005633786.1\|502679_503018_+	hypothetical protein	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
WP_006995347.1\|503014_503929_+\|plate	baseplate assembly protein	Q19UQ5	Mannheimia_phage	1.5e-93	59.2
WP_006995346.1\|503918_504455_+\|tail	phage tail protein I	Q19UQ4	Mannheimia_phage	4.5e-50	53.5
WP_013527351.1\|506738_507341_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.2e-94	91.5
WP_013525646.1\|507337_507838_+	hypothetical protein	F6MIM0	Haemophilus_phage	8.5e-51	60.4
WP_041175148.1\|508013_508133_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_013527352.1\|508189_509035_+	hypothetical protein	F6MIM2	Haemophilus_phage	5.0e-120	73.2
WP_006995341.1\|509479_510664_+\|tail	tail sheath protein	A0A1S6KZY7	Salmonella_phage	6.0e-103	48.7
WP_006995340.1\|510667_511174_+\|tail	phage major tail tube protein	Q19UP8	Mannheimia_phage	7.1e-53	59.5
WP_005655095.1\|511242_511542_+\|tail	phage tail assembly protein	E5E3Q1	Burkholderia_phage	1.2e-12	42.9
WP_006995339.1\|511541_511688_+\|tail	GpE family phage tail protein	E5E3Q0	Burkholderia_phage	2.2e-07	65.0
WP_006995336.1\|512016_512454_+\|tail	phage tail protein	A0A0M3LQ18	Mannheimia_phage	1.0e-39	56.7
WP_013527353.1\|512453_513647_+	phage late control D family protein	R9QBT3	Mannheimia_phage	1.5e-101	51.0
WP_005668419.1\|513672_513912_-	nuclease	Q19UP2	Mannheimia_phage	6.6e-09	40.5
WP_006995333.1\|513922_515092_-	hypothetical protein	NA	NA	NA	NA
WP_006995332.1\|515101_515791_-	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.0e-30	34.9
WP_013527354.1\|515910_516159_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	1.5e-08	44.4
WP_005655063.1\|516923_517166_+	hypothetical protein	Q19UN6	Mannheimia_phage	1.2e-21	68.1
WP_006995328.1\|517539_517920_+	hypothetical protein	NA	NA	NA	NA
WP_005668404.1\|517923_518166_+	hypothetical protein	NA	NA	NA	NA
WP_005655052.1\|518291_518600_+	hypothetical protein	NA	NA	NA	NA
WP_151230667.1\|518609_520796_+	replication endonuclease	Q94N00	Haemophilus_virus	6.4e-167	42.7
WP_005668397.1\|520814_521006_+	hypothetical protein	NA	NA	NA	NA
WP_005668395.1\|521016_521226_+	hypothetical protein	NA	NA	NA	NA
WP_005668393.1\|521239_521761_+	hypothetical protein	A0A0M3LTD8	Mannheimia_phage	7.3e-29	42.4
WP_013527358.1\|522000_523056_+\|integrase	site-specific integrase	K7PKD7	Enterobacteria_phage	2.2e-56	36.2
523057:523118	attR	NA	NA	NA	NA

DBSCAN-SWA_3

864257 : 873137

Mannheimia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005651292.1\|864257_864674_-	hypothetical protein	E5EYK4	Acinetobacter_phage	1.1e-08	35.9
WP_013525621.1\|866002_866362_-	hypothetical protein	NA	NA	NA	NA
WP_013525620.1\|866358_866595_-	hypothetical protein	NA	NA	NA	NA
WP_013525619.1\|866591_867161_-	hypothetical protein	NA	NA	NA	NA
WP_013527462.1\|867439_868543_-	hypothetical protein	A0A0U3TGV3	Pseudomonas_phage	7.5e-07	61.9
WP_005668705.1\|868604_869039_-	single-stranded DNA-binding protein	A0A059WRL7	Vibrio_phage	7.5e-19	36.2
WP_013525616.1\|869038_869689_-	hypothetical protein	A0A0M3LP90	Mannheimia_phage	1.2e-84	71.6
WP_013525615.1\|869663_870614_-	recombinase	A0A0M3LNU3	Mannheimia_phage	1.0e-108	68.3
WP_041174891.1\|870626_870920_-	hypothetical protein	NA	NA	NA	NA
WP_013525614.1\|870916_871264_-	hypothetical protein	NA	NA	NA	NA
WP_013527463.1\|871277_872015_-	site-specific DNA-methyltransferase	A0A0E3U2R2	Fusobacterium_phage	3.1e-113	77.5
WP_013525612.1\|872105_873137_-	endonuclease	D0UIK6	Aggregatibacter_phage	5.2e-42	82.8

DBSCAN-SWA_4

876469 : 914498

Pseudomonas_phage(15.62%)

tRNA,tail,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013525608.1\|876469_877057_-	recombinase NinG	A0A2I7RAC0	Vibrio_phage	1.7e-37	48.5
WP_005651114.1\|877149_877566_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.1e-62	84.7
WP_005633909.1\|877602_877827_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_013527465.1\|877823_878465_-	replication P	A0A1P8DTF3	Proteus_phage	8.8e-16	32.7
WP_013525606.1\|878449_879232_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	4.3e-41	45.1
WP_013525605.1\|879233_879467_-	hypothetical protein	A0A0M3LR73	Mannheimia_phage	2.3e-14	60.3
WP_005651123.1\|879512_879965_-	hypothetical protein	NA	NA	NA	NA
WP_006995067.1\|880008_880215_-	transcriptional regulator	NA	NA	NA	NA
WP_013527466.1\|880348_881317_+	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	9.2e-17	30.5
WP_013525603.1\|881739_882066_+	hypothetical protein	NA	NA	NA	NA
WP_013525602.1\|882052_882457_+	M15 family metallopeptidase	W0LI70	Edwardsiella_phage	3.9e-46	68.7
WP_013527467.1\|882453_882843_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_013525600.1\|882817_883048_+	hypothetical protein	NA	NA	NA	NA
WP_012054986.1\|883059_884415_+	hypothetical protein	A0A0E3U266	Fusobacterium_phage	1.8e-98	44.8
WP_005692583.1\|884411_884633_-	hypothetical protein	NA	NA	NA	NA
WP_005651145.1\|884690_885059_+	LuxR family transcriptional regulator	A0A0R6PHW5	Moraxella_phage	3.4e-12	39.3
WP_013525599.1\|885039_886389_+\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	5.5e-145	58.2
WP_013525598.1\|886390_887707_+	DUF1073 domain-containing protein	A0A2K9V3H1	Faecalibacterium_phage	1.8e-47	32.0
WP_041174890.1\|887687_888905_+	hypothetical protein	I3PGT9	Xanthomonas_phage	2.7e-34	36.4
WP_005692574.1\|889030_890104_+	DUF2213 domain-containing protein	E5AGA6	Erwinia_phage	1.2e-54	40.2
WP_013525596.1\|890116_890536_+	hypothetical protein	NA	NA	NA	NA
WP_013525595.1\|890543_891545_+	DUF2184 domain-containing protein	A0A0N9SG07	Pseudomonas_phage	2.9e-50	36.2
WP_005692571.1\|891547_891736_+	hypothetical protein	NA	NA	NA	NA
WP_013525594.1\|891739_892090_+	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_013525593.1\|892082_892541_+	hypothetical protein	A0A2I7R754	Vibrio_phage	4.1e-15	34.5
WP_013525592.1\|892540_892900_+	hypothetical protein	NA	NA	NA	NA
WP_013527469.1\|892901_893411_+	hypothetical protein	NA	NA	NA	NA
WP_013525590.1\|893397_894471_+	DUF3383 family protein	A0A0N9SJA3	Pseudomonas_phage	8.5e-64	35.7
WP_005643344.1\|894516_894942_+	DUF3277 family protein	A0A2K9V3K6	Faecalibacterium_phage	4.0e-25	45.9
WP_013525589.1\|894941_895424_+	hypothetical protein	NA	NA	NA	NA
WP_013525588.1\|895608_898026_+	tape measure protein	H9EB42	Vibrio_phage	1.6e-33	28.0
WP_013527470.1\|898100_898823_-	hypothetical protein	A6XMM0	Bacillus_virus	5.8e-24	46.4
WP_005688900.1\|898984_899566_+	hypothetical protein	NA	NA	NA	NA
WP_005643334.1\|899562_899877_+	hypothetical protein	NA	NA	NA	NA
WP_005692555.1\|899873_900836_+	hypothetical protein	A0A0N9RT60	Pseudomonas_phage	1.1e-33	33.8
WP_005692552.1\|900832_901504_+	hypothetical protein	A0A0M5M1K7	Salmonella_phage	9.8e-18	33.5
WP_005651178.1\|901500_901866_+	hypothetical protein	K4RI30	Pseudomonas_phage	5.3e-10	31.8
WP_005651180.1\|901858_903295_+	hypothetical protein	E5AGC3	Erwinia_phage	1.2e-44	29.0
WP_012054979.1\|903303_903918_+	DUF2612 domain-containing protein	A0A0N9SSD8	Pseudomonas_phage	1.0e-21	37.4
WP_013527471.1\|903927_906297_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	6.4e-213	59.8
WP_013525580.1\|906308_906911_+	hypothetical protein	Q94MX9	Haemophilus_virus	5.0e-98	94.5
WP_013525579.1\|906907_907366_+	hypothetical protein	F6MIM0	Haemophilus_phage	4.9e-45	55.8
WP_005691741.1\|908013_908739_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_005662648.1\|908791_909244_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_005656383.1\|909311_910526_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	1.5e-32	35.5
WP_080334623.1\|910549_910969_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	2.6e-53	80.6
WP_013527473.1\|911022_911346_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	3.4e-24	46.7
WP_013527474.1\|911358_911883_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_005649159.1\|911933_912620_+	DUF2625 domain-containing protein	NA	NA	NA	NA
WP_013527475.1\|912638_914498_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	4.0e-109	42.3

DBSCAN-SWA_5

987164 : 991102

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013525530.1\|987164_987371_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	1.5e-09	50.7
WP_013525530.1\|987445_987652_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	1.5e-09	50.7
WP_005666693.1\|987726_987933_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	1.1e-09	50.7
WP_005631184.1\|988007_988214_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	3.0e-10	52.2
WP_151230688.1\|988288_988549_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_151230810.1\|988472_988679_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	9.6e-09	50.8
WP_013525530.1\|988752_988959_+	heavy-metal-associated domain-containing protein	A0A218MNH0	uncultured_virus	1.5e-09	50.7
WP_013525529.1\|988933_991102_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.0e-192	51.4

DBSCAN-SWA_6

1136864 : 1219117

Haemophilus_virus(58.33%)

protease,portal,holin,head,tRNA,integrase,capsid,terminase,tail

attL 1168707:1168725|attR 1236361:1236379

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_111723564.1\|1136864_1138016_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_006996302.1\|1138132_1138393_-	(Na+)-NQR maturation NqrM	NA	NA	NA	NA
WP_013527529.1\|1139580_1140816_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit F	NA	NA	NA	NA
WP_005631374.1\|1140828_1141425_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit E	NA	NA	NA	NA
WP_013527530.1\|1141428_1142055_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit D	NA	NA	NA	NA
WP_005653794.1\|1142054_1142789_-	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_005653793.1\|1142781_1144017_-	NADH:ubiquinone reductase (Na(+)-transporting) subunit B	NA	NA	NA	NA
WP_041175159.1\|1144019_1145363_-	Na(+)-translocating NADH-quinone reductase subunit A	NA	NA	NA	NA
WP_005668108.1\|1145653_1145965_-	BolA family transcriptional regulator	NA	NA	NA	NA
WP_013526539.1\|1146058_1146658_+	hypothetical protein	NA	NA	NA	NA
WP_005691516.1\|1148356_1149244_-	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_005544470.1\|1149948_1150119_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_105886549.1\|1151243_1151471_-	hypothetical protein	NA	NA	NA	NA
WP_013526535.1\|1151881_1152820_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_013526534.1\|1152832_1153561_+	3-oxoacyl-ACP reductase FabG	A0A0K0KVL6	Prochlorococcus_phage	1.6e-10	28.1
WP_005544465.1\|1153816_1154047_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	2.3e-11	51.5
WP_005654411.1\|1154251_1155583_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_006996315.1\|1155642_1156350_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_151230693.1\|1156459_1157689_+\|protease	FtsH protease activity modulator HflK	K4F6D5	Cronobacter_phage	1.4e-06	24.3
WP_065251160.1\|1157688_1158576_+\|protease	protease modulator HflC	A0A2I7S9Z3	Vibrio_phage	1.8e-06	26.6
WP_065251161.1\|1158618_1159053_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_006996320.1\|1162434_1163424_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_006996321.1\|1163772_1164459_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_006996322.1\|1164503_1165406_+	N-acetylmannosamine kinase	NA	NA	NA	NA
WP_006996323.1\|1165398_1166265_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_006996324.1\|1166275_1167157_+	N-acetylneuraminate lyase	NA	NA	NA	NA
WP_151230694.1\|1167442_1168255_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_006996326.1\|1168391_1169537_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
1168707:1168725	attL	NA	NA	NA	NA
WP_151230695.1\|1169735_1170830_-	porin	NA	NA	NA	NA
WP_013526524.1\|1171085_1171550_-	ribonuclease HI	J9Q745	Salmonella_phage	5.5e-44	52.2
WP_013526523.1\|1171610_1172381_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	4.4e-38	36.1
WP_150007586.1\|1173060_1174575_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_150007585.1\|1174653_1175844_-	sugar transporter	NA	NA	NA	NA
WP_151230696.1\|1175843_1177019_-	hypothetical protein	NA	NA	NA	NA
WP_151230697.1\|1177022_1177610_-	dCTP deaminase	I4AZP2	Saccharomonospora_phage	3.6e-24	40.5
WP_005627949.1\|1178481_1179798_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	5.3e-185	82.1
WP_151230698.1\|1180031_1180562_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	9.8e-21	37.6
WP_110437529.1\|1181021_1182035_-\|integrase	site-specific integrase	P79671	Haemophilus_phage	1.7e-194	99.7
WP_005667764.1\|1182034_1182799_-	hypothetical protein	P79672	Haemophilus_phage	6.3e-138	100.0
WP_151230699.1\|1182808_1182991_-	hypothetical protein	A0A0R6PI25	Moraxella_phage	4.5e-10	45.8
WP_151230700.1\|1182990_1183566_-	phage repressor protein CI	Q94N02	Haemophilus_virus	1.3e-106	98.4
WP_048950682.1\|1183684_1183897_+	hypothetical protein	P79674	Haemophilus_phage	2.1e-30	98.6
WP_112095993.1\|1184032_1184536_+	hypothetical protein	P79675	Haemophilus_phage	3.1e-77	88.0
WP_112095991.1\|1184554_1184923_+	hypothetical protein	P79676	Haemophilus_phage	4.5e-65	97.5
WP_112095989.1\|1184922_1185108_+	hypothetical protein	Q775F8	Haemophilus_virus	2.3e-30	98.4
WP_151230701.1\|1185119_1185401_+	hypothetical protein	Q775F7	Haemophilus_virus	3.9e-45	97.8
WP_151230702.1\|1185451_1185712_+	hypothetical protein	Q775F6	Haemophilus_virus	3.1e-44	97.7
WP_151230703.1\|1185714_1188042_+	replication endonuclease	Q94N00	Haemophilus_virus	0.0e+00	96.6
WP_151230704.1\|1188053_1188365_+	hypothetical protein	Q94MZ9	Haemophilus_virus	3.9e-46	94.2
WP_151230705.1\|1188374_1188893_+	phage N-6-adenine-methyltransferase	Q94MZ8	Haemophilus_virus	2.9e-94	95.8
WP_110442614.1\|1188931_1189150_-	hypothetical protein	NA	NA	NA	NA
WP_080359101.1\|1189444_1189705_-	ogr/Delta-like zinc finger family protein	Q1I103	Pasteurella_virus	1.4e-25	59.3
WP_116972957.1\|1189785_1190823_-\|portal	phage portal protein	Q94MZ7	Haemophilus_virus	2.4e-196	98.0
WP_151230706.1\|1190812_1192636_-\|terminase	terminase ATPase subunit family protein	Q94MZ6	Haemophilus_virus	0.0e+00	99.2
WP_151230707.1\|1192839_1193733_+\|capsid	GPO family capsid scaffolding protein	Q94MZ5	Haemophilus_virus	2.0e-151	99.7
WP_050951613.1\|1193735_1194746_+\|capsid	phage major capsid protein, P2 family	Q94MZ4	Haemophilus_virus	3.4e-187	99.4
WP_151230708.1\|1194759_1195605_+\|terminase	terminase endonuclease subunit	Q94MZ3	Haemophilus_virus	4.8e-147	95.0
WP_151230709.1\|1195597_1196050_+\|head	head completion/stabilization protein	Q94MZ2	Haemophilus_virus	6.7e-71	90.7
WP_151230710.1\|1196037_1196520_+\|tail	phage tail protein	Q94MZ1	Haemophilus_virus	5.9e-57	65.4
WP_151230711.1\|1196516_1197242_+	phage virion morphogenesis protein	Q1I0Z5	Pasteurella_virus	5.6e-19	32.8
WP_151230712.1\|1197522_1198653_+	DUF2586 domain-containing protein	Q94MY9	Haemophilus_virus	1.2e-217	98.7
WP_105882056.1\|1198656_1199109_+	DUF2597 family protein	Q94MY8	Haemophilus_virus	1.3e-74	98.6
WP_105882057.1\|1199195_1199432_+\|holin	holin	Q94MY7	Haemophilus_virus	1.4e-35	98.7
WP_151230713.1\|1199424_1199985_+	lysozyme	Q94MY6	Haemophilus_virus	8.0e-90	90.5
WP_005667724.1\|1199969_1200317_+	hypothetical protein	Q94MY5	Haemophilus_virus	1.0e-55	100.0
WP_075985599.1\|1200276_1200501_+	hypothetical protein	NA	NA	NA	NA
WP_005667723.1\|1200503_1200812_+	hypothetical protein	Q775G2	Haemophilus_virus	1.2e-47	100.0
WP_151230714.1\|1201000_1203070_+\|tail	phage tail tape measure protein	Q94MY4	Haemophilus_virus	4.5e-279	73.6
WP_015979431.1\|1203073_1203409_+	DUF2590 family protein	Q94MY3	Haemophilus_virus	2.3e-52	99.1
WP_151230715.1\|1203401_1204571_+	hypothetical protein	Q94MY2	Haemophilus_virus	4.4e-215	97.9
WP_015979433.1\|1204580_1205105_+	hypothetical protein	Q94MY1	Haemophilus_virus	4.8e-97	100.0
WP_151230716.1\|1205134_1207678_+\|tail	phage tail protein	Q94MY0	Haemophilus_virus	2.2e-280	64.4
WP_151230717.1\|1207690_1208308_+	hypothetical protein	Q7Y5S1	Haemophilus_phage	4.8e-11	38.5
WP_151230718.1\|1208286_1208562_+	DNA helicase UvrD	Q776W9	Haemophilus_phage	3.0e-29	71.3
WP_151230719.1\|1208574_1209342_+	hypothetical protein	Q94MX8	Haemophilus_virus	3.7e-130	96.5
WP_151230720.1\|1209328_1209892_+	hypothetical protein	Q94MX7	Haemophilus_virus	1.5e-75	92.3
WP_151230721.1\|1209888_1211490_+	hypothetical protein	Q94MX6	Haemophilus_virus	1.6e-276	95.9
WP_005658075.1\|1212616_1213174_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_006996334.1\|1213448_1214639_+	cystathionine beta-lyase	NA	NA	NA	NA
WP_006996335.1\|1215116_1216478_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_005653606.1\|1216590_1217097_+	membrane protein	NA	NA	NA	NA
WP_013527541.1\|1217146_1218154_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_006996337.1\|1218331_1219117_-\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	A0A291ATS8	Pandoravirus	1.4e-18	29.5
1236361:1236379	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1403492 : 1466111

Bacillus_phage(11.76%)

protease,tRNA,terminase,integrase,transposase,lysis

attL 1398721:1398749|attR 1461929:1461957

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1398721:1398749	attL	NA	NA	NA	NA
WP_013527596.1\|1403492_1404884_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	30.8
WP_013527597.1\|1405077_1405968_+	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_086935171.1\|1405960_1407274_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_013527599.1\|1407559_1408240_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_065250836.1\|1408397_1409474_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_013527602.1\|1412617_1413754_-	fimbrial protein	NA	NA	NA	NA
WP_013527603.1\|1413765_1416267_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_013527604.1\|1416290_1416986_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_013527605.1\|1417065_1417677_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_013527607.1\|1418979_1419789_+	iron ABC transporter permease	NA	NA	NA	NA
WP_013527608.1\|1419751_1420483_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.2e-16	31.4
WP_013527609.1\|1420512_1421319_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_005689848.1\|1421370_1422072_+	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	4.3e-08	29.6
WP_006995902.1\|1422122_1422983_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_006995903.1\|1423095_1425144_-\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	4.9e-60	29.0
WP_006995904.1\|1425294_1426407_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_151230730.1\|1427294_1427957_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_081457566.1\|1428061_1428745_+	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
WP_006995911.1\|1429667_1429976_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_151230731.1\|1430775_1432968_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	6.5e-127	40.0
WP_006995914.1\|1432955_1433348_-	hypothetical protein	NA	NA	NA	NA
WP_006995916.1\|1434011_1434215_-	hypothetical protein	NA	NA	NA	NA
WP_006995917.1\|1434204_1434576_-	hypothetical protein	NA	NA	NA	NA
WP_013527611.1\|1435682_1436456_-	phage antirepressor Ant	A0A0P0ZCA2	Stx2-converting_phage	1.7e-18	49.1
WP_006995923.1\|1436445_1436748_-	hypothetical protein	NA	NA	NA	NA
WP_006995924.1\|1436747_1437215_-\|terminase	terminase	A0A1X9SFE5	Acinetobacter_phage	1.1e-23	48.8
WP_006995925.1\|1437195_1437489_-	hypothetical protein	NA	NA	NA	NA
WP_006995926.1\|1437481_1437967_-	hypothetical protein	NA	NA	NA	NA
WP_032826278.1\|1437981_1438242_-	transcriptional regulator	NA	NA	NA	NA
WP_005681754.1\|1438252_1438501_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_111723554.1\|1438767_1440094_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-63	49.0
WP_006995928.1\|1440124_1441147_-	hypothetical protein	NA	NA	NA	NA
WP_006995929.1\|1441291_1441732_-	hypothetical protein	NA	NA	NA	NA
WP_006995930.1\|1441733_1442318_-	SocA family protein	NA	NA	NA	NA
WP_151230732.1\|1442486_1443743_-\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	1.1e-73	37.9
WP_005657488.1\|1445077_1445533_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_013527653.1\|1445549_1447037_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_006995933.1\|1447048_1449583_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.6e-28	26.0
WP_111723554.1\|1449684_1451011_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-63	49.0
WP_032826317.1\|1451077_1454260_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.6e-78	30.8
WP_041175184.1\|1454261_1455308_-	hypothetical protein	NA	NA	NA	NA
WP_151230733.1\|1455300_1456680_-	restriction endonuclease subunit S	A0A1V0SLK8	Klosneuvirus	5.7e-12	30.6
WP_151230734.1\|1456672_1458319_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	4.1e-49	30.1
WP_005628626.1\|1458508_1458895_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_151230735.1\|1458894_1459815_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_081457567.1\|1459894_1461028_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_006995943.1\|1461058_1461898_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	1.6e-41	39.3
WP_006995944.1\|1462023_1462809_-	hypothetical protein	NA	NA	NA	NA
1461929:1461957	attR	NA	NA	NA	NA
WP_005665228.1\|1462799_1463180_-	SufE family protein	NA	NA	NA	NA
WP_006995945.1\|1463176_1464376_-	cysteine desulfurase	Q2XUY6	environmental_halophage	8.3e-60	33.1
WP_011962156.1\|1464377_1464839_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	1.2e-30	47.0
WP_005650310.1\|1464974_1465397_+	membrane protein	NA	NA	NA	NA
WP_006995947.1\|1465415_1466111_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA

DBSCAN-SWA_8

1663671 : 1686325

Haemophilus_phage(60.87%)

holin,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013527736.1\|1663671_1664469_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	1.0e-05	46.7
WP_074039950.1\|1664506_1664683_-	peptidase	NA	NA	NA	NA
WP_013527737.1\|1664843_1665260_-	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	1.9e-51	71.0
WP_013527738.1\|1665402_1666119_-	hypothetical protein	A0A0M3LSH7	Mannheimia_phage	6.9e-70	57.7
WP_011961987.1\|1666130_1666364_-	DUF935 family protein	B7SDN1	Haemophilus_phage	2.1e-20	68.9
WP_006996123.1\|1666363_1666834_+	hypothetical protein	NA	NA	NA	NA
WP_013527740.1\|1668554_1669046_-	hypothetical protein	F6MIM0	Haemophilus_phage	9.9e-52	62.3
WP_005661624.1\|1669042_1669645_-	hypothetical protein	Q94MX9	Haemophilus_virus	2.6e-94	91.0
WP_151230757.1\|1669656_1671918_-\|tail	phage tail protein	Q94MY0	Haemophilus_virus	7.5e-187	57.6
WP_006996360.1\|1671927_1672503_-	DUF2612 domain-containing protein	D0UIH4	Aggregatibacter_phage	2.4e-89	80.1
WP_006996361.1\|1672502_1673645_-\|plate	baseplate J/gp47 family protein	D0UIH5	Aggregatibacter_phage	6.7e-184	86.3
WP_006996362.1\|1673740_1674094_-	hypothetical protein	Q7Y5S5	Haemophilus_phage	2.5e-57	89.6
WP_006996363.1\|1674090_1674735_-	hypothetical protein	Q7Y5S7	Haemophilus_phage	1.8e-85	85.0
WP_006996364.1\|1674731_1675616_-	hypothetical protein	D0UIH8	Aggregatibacter_phage	1.9e-141	89.5
WP_013527742.1\|1675870_1676179_-	hypothetical protein	Q7Y5S9	Haemophilus_phage	7.8e-47	82.4
WP_006996366.1\|1676184_1676967_-	hypothetical protein	Q7Y5T0	Haemophilus_phage	1.0e-82	65.5
WP_006996369.1\|1679211_1679622_-	hypothetical protein	Q776V6	Haemophilus_phage	5.9e-50	70.8
WP_006996370.1\|1679621_1680053_-	DUF3277 family protein	Q7Y5T4	Haemophilus_phage	2.9e-71	93.0
WP_151230758.1\|1680304_1681807_-	DUF3383 domain-containing protein	Q7Y5T5	Haemophilus_phage	7.3e-247	86.8
WP_013525927.1\|1681811_1682174_-	hypothetical protein	Q7Y5T6	Haemophilus_phage	6.6e-45	73.9
WP_006996375.1\|1682607_1683054_-	hypothetical protein	Q7Y5T8	Haemophilus_phage	6.7e-55	72.3
WP_006996376.1\|1683054_1683417_-	DUF4054 domain-containing protein	Q7Y5T9	Haemophilus_phage	1.5e-33	67.3
WP_006996377.1\|1683426_1684341_-	DUF2184 domain-containing protein	Q7Y5U0	Haemophilus_phage	1.7e-150	89.5
WP_006996378.1\|1684350_1684791_-	hypothetical protein	D0UIJ1	Aggregatibacter_phage	2.3e-47	71.1
WP_065250978.1\|1685968_1686325_-	DUF2513 domain-containing protein	A0A2H4J4K9	uncultured_Caudovirales_phage	5.0e-05	28.9

DBSCAN-SWA_9

1689399 : 1701259

Haemophilus_phage(22.22%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006996384.1\|1689399_1690743_-\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	3.1e-124	53.7
WP_005693952.1\|1690729_1691245_-\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	5.6e-21	40.9
WP_006996385.1\|1691321_1691573_+	cytotoxic translational repressor of toxin-antitoxin stability system	A0A1S5NR91	Burkholderia_phage	6.4e-15	50.6
WP_006996386.1\|1691556_1691904_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	4.4e-22	56.1
WP_013527746.1\|1691905_1692187_-	hypothetical protein	Q776X1	Haemophilus_phage	2.5e-31	74.4
WP_006996388.1\|1692098_1692422_-	DUF2570 domain-containing protein	Q7Y5U9	Haemophilus_phage	4.5e-21	56.5
WP_061722324.1\|1693569_1694412_-	antirepressor	A0A0M3LR56	Mannheimia_phage	4.2e-50	74.0
WP_048950164.1\|1694721_1695873_-	type I restriction enzyme R protein	A0A1S5SAB0	Streptococcus_phage	2.0e-34	29.8
WP_005643898.1\|1696038_1696407_-	hypothetical protein	Q7Y5V5	Haemophilus_phage	1.8e-37	63.4
WP_048950163.1\|1696408_1696957_-	NinG recombination protein	D0UIK8	Aggregatibacter_phage	2.3e-57	62.0
WP_005656663.1\|1697045_1697465_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	5.1e-57	76.1
WP_005633909.1\|1697501_1697726_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_042599559.1\|1697722_1698364_-	replication P	A0A1I9KFB0	Aeromonas_phage	8.2e-06	24.9
WP_011272607.1\|1698348_1699107_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	1.6e-61	69.3
WP_011272606.1\|1699103_1699778_-	hypothetical protein	D0UIL6	Aggregatibacter_phage	6.9e-80	67.9
WP_048950185.1\|1699826_1700267_-	hypothetical protein	A0A0U4B0E3	Pseudomonas_phage	8.1e-13	32.6
WP_005655320.1\|1700321_1700504_-	hypothetical protein	Q5G8T3	Enterobacteria_phage	1.6e-10	51.7
WP_044332609.1\|1700605_1701259_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.2e-31	39.0

DBSCAN-SWA_10

1704509 : 1711661

Mannheimia_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048950187.1\|1704509_1705202_-	DUF4145 domain-containing protein	V5URE2	Shigella_phage	5.2e-14	27.2
WP_042593370.1\|1705202_1705382_+	hypothetical protein	NA	NA	NA	NA
WP_005651093.1\|1706556_1707294_+	site-specific DNA-methyltransferase	A0A0E3U2R2	Fusobacterium_phage	5.2e-113	77.5
WP_005651091.1\|1707307_1707652_+	hypothetical protein	NA	NA	NA	NA
WP_012054992.1\|1707648_1707942_+	hypothetical protein	NA	NA	NA	NA
WP_061720767.1\|1707954_1708875_+	recombinase	A0A0M3LNU3	Mannheimia_phage	2.2e-116	71.9
WP_065246950.1\|1708849_1709500_+	translocation protein TolB precursor	A0A0M3LP90	Mannheimia_phage	2.6e-84	71.1
WP_112081617.1\|1709499_1709934_+	single-stranded DNA-binding protein	L7TJL2	Pseudomonas_virus	1.3e-18	35.1
WP_005652248.1\|1709993_1710173_-	hypothetical protein	Q19US2	Mannheimia_phage	1.8e-11	62.1
WP_151230760.1\|1710493_1710730_+	hypothetical protein	NA	NA	NA	NA
WP_041175199.1\|1710726_1711077_+	hypothetical protein	NA	NA	NA	NA
WP_005684834.1\|1711220_1711661_+	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	1.9e-49	65.8

DBSCAN-SWA_11

1732683 : 1740869

Haemophilus_phage(57.14%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151230761.1\|1732683_1733520_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	5.9e-12	33.6
WP_006995342.1\|1735037_1735883_-	hypothetical protein	F6MIM2	Haemophilus_phage	2.3e-120	72.8
WP_005641687.1\|1735939_1736059_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_151230762.1\|1736234_1736723_-	enoyl-CoA hydratase	F6MIM0	Haemophilus_phage	2.1e-46	55.6
WP_151230763.1\|1736715_1737342_-	hypothetical protein	Q94MX9	Haemophilus_virus	1.6e-30	50.9
WP_151230764.1\|1737354_1739250_-\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	9.9e-116	49.6
WP_151230814.1\|1739253_1739847_-	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	3.8e-66	63.0
WP_151230765.1\|1739846_1740869_-\|plate	baseplate J/gp47 family protein	F6MIL6	Haemophilus_phage	2.1e-120	65.5

DBSCAN-SWA_12

1954866 : 1980464

Haemophilus_phage(52.38%)

tail,transposase,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006995433.1\|1954866_1955298_-	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	3.5e-37	60.9
WP_006995434.1\|1955307_1955613_-	hypothetical protein	B7SDP3	Haemophilus_phage	2.8e-20	50.0
WP_006995435.1\|1955676_1956600_-\|tail	tail sheath protein	B7SDP1	Haemophilus_phage	3.9e-134	74.6
WP_151230792.1\|1956599_1957637_-	I protein	B7SDN9	Haemophilus_phage	1.2e-67	46.4
WP_005688555.1\|1957918_1958335_-	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	2.8e-47	67.4
WP_151230793.1\|1959353_1959776_-	hypothetical protein	A0A0M3LSH7	Mannheimia_phage	2.6e-40	71.1
WP_151230794.1\|1961472_1963113_-\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	1.2e-250	78.5
WP_151230795.1\|1963242_1963746_-	DUF1804 family protein	F6MIK6	Haemophilus_phage	1.6e-44	51.2
WP_006995441.1\|1963747_1964014_-	hypothetical protein	NA	NA	NA	NA
WP_006995442.1\|1964013_1964271_-	hypothetical protein	NA	NA	NA	NA
WP_151230796.1\|1964394_1964652_-	DUF2681 domain-containing protein	NA	NA	NA	NA
WP_041174960.1\|1964651_1964942_-	DUF2644 domain-containing protein	F6MIK0	Haemophilus_phage	3.3e-15	61.4
WP_151230797.1\|1965095_1965599_-	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	4.4e-55	64.4
WP_006995448.1\|1965680_1966109_-	hypothetical protein	F6MIJ8	Haemophilus_phage	3.3e-27	42.3
WP_151230798.1\|1966214_1966433_-	hypothetical protein	NA	NA	NA	NA
WP_111723566.1\|1966442_1967084_-	phage antirepressor Ant	A0A0A7RVQ9	Clostridium_phage	1.4e-10	38.7
WP_006996626.1\|1967556_1967760_-	KilA-N domain-containing protein	NA	NA	NA	NA
WP_006996625.1\|1967786_1968185_-	regulatory protein GemA	A0A0M3LP80	Mannheimia_phage	2.1e-20	45.1
WP_006996624.1\|1968425_1968674_-	hypothetical protein	NA	NA	NA	NA
WP_006996623.1\|1968678_1968852_-	hypothetical protein	NA	NA	NA	NA
WP_151230799.1\|1969023_1969221_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_151230800.1\|1969395_1970013_-	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	8.9e-66	58.6
WP_005647090.1\|1970013_1970205_-	HTH domain-containing protein	F6MII8	Haemophilus_phage	9.5e-11	57.6
WP_111723541.1\|1970213_1970510_-	hypothetical protein	NA	NA	NA	NA
WP_151230801.1\|1970520_1971402_-	AAA family ATPase	A0A0M3LP72	Mannheimia_phage	2.9e-118	75.1
WP_151230802.1\|1971453_1971870_-	hypothetical protein	NA	NA	NA	NA
WP_151230803.1\|1971862_1973845_-\|transposase	transposase	A0A0M3LPN5	Mannheimia_phage	2.8e-185	54.6
WP_032823844.1\|1973888_1974167_-	DNA-binding protein	F6MII4	Haemophilus_phage	1.0e-16	58.8
WP_032823845.1\|1974342_1975059_+	helix-turn-helix domain-containing protein	A0A0M3LP76	Mannheimia_phage	1.5e-19	34.9
WP_151230804.1\|1975658_1976999_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	2.5e-81	39.8
WP_006996427.1\|1977060_1977678_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_151230805.1\|1977695_1980464_-	DUF87 domain-containing protein	A0A218M9A2	Mycobacterium_phage	8.6e-84	42.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage