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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP020313 Staphylococcus aureus strain KUH140046 7 crisprs csa3,cas3,DinG,DEDDh,WYL 7 0 220 1
NZ_AP020314 Staphylococcus aureus strain KUH140046 plasmid p01KUH140046, complete sequence 0 crisprs csa3 0 0 4 0

Results visualization

1. NZ_AP020313
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_1 922149-922335 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_2 1188941-1189022 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_3 1401602-1401694 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_4 1629186-1629286 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_5 1645541-1645642 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_6 2546231-2546424 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP020313_7 2670437-2670587 Orphan NA
2 spacers
csa3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 102017-102053 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 624173-624209 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 1238452-1238488 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 1285828-1285864 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 1284858-1284894 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 1402620-1402656 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 1920772-1920808 0 1.0
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 103474-103510 0 1.0
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 1022906-1022942 0 1.0
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 1699852-1699888 0 1.0
NZ_AP020313_2 2.1|1188965|34|NZ_AP020313|CRISPRCasFinder 1188965-1188998 34 NZ_AP020313.1 624156-624189 0 1.0
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 996709-996745 1 0.973
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 2380007-2380043 1 0.973
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 444605-444641 1 0.973
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 624115-624151 1 0.973
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 2264134-2264170 1 0.973
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 259373-259409 1 0.973
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 714066-714102 1 0.973
NZ_AP020313_6 6.2|2546310|36|NZ_AP020313|CRT 2546310-2546345 36 NZ_AP020313.1 259378-259413 1 0.972
NZ_AP020313_1 1.1|922168|37|NZ_AP020313|CRT 922168-922204 37 NZ_AP020313.1 926136-926172 2 0.946
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 103533-103569 2 0.946
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 922112-922148 2 0.946
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 926192-926228 2 0.946
NZ_AP020313_1 1.2|922224|37|NZ_AP020313|CRT 922224-922260 37 NZ_AP020313.1 1238508-1238544 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 92727-92763 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 444663-444699 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 1188925-1188961 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 1243887-1243923 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 1243942-1243978 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 2100164-2100200 2 0.946
NZ_AP020313_1 1.3|922280|37|NZ_AP020313|CRT 922280-922316 37 NZ_AP020313.1 2354725-2354761 2 0.946
NZ_AP020313_6 6.1|2546254|33|NZ_AP020313|CRT 2546254-2546286 33 NZ_AP020313.1 103470-103502 2 0.939
NZ_AP020313_6 6.1|2546254|33|NZ_AP020313|CRT 2546254-2546286 33 NZ_AP020313.1 1238504-1238536 2 0.939
NZ_AP020313_6 6.1|2546254|33|NZ_AP020313|CRT 2546254-2546286 33 NZ_AP020313.1 2264130-2264162 2 0.939
NZ_AP020313_6 6.2|2546310|36|NZ_AP020313|CRT 2546310-2546345 36 NZ_AP020313.1 92723-92758 2 0.944
NZ_AP020313_6 6.2|2546310|36|NZ_AP020313|CRT 2546310-2546345 36 NZ_AP020313.1 444659-444694 2 0.944
NZ_AP020313_6 6.3|2546369|33|NZ_AP020313|CRT 2546369-2546401 33 NZ_AP020313.1 103470-103502 2 0.939
NZ_AP020313_6 6.3|2546369|33|NZ_AP020313|CRT 2546369-2546401 33 NZ_AP020313.1 624111-624143 2 0.939
NZ_AP020313_6 6.3|2546369|33|NZ_AP020313|CRT 2546369-2546401 33 NZ_AP020313.1 2264130-2264162 2 0.939

1. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 102017-102053, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

2. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 624173-624209, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

3. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 1238452-1238488, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

4. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 1285828-1285864, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

5. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 1284858-1284894, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

6. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 1402620-1402656, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

7. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 1920772-1920808, mismatch: 0, identity: 1.0

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattgggaatccaatttc	Protospacer
*************************************

8. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 103474-103510, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

9. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 1022906-1022942, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

10. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 1699852-1699888, mismatch: 0, identity: 1.0

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcagct	Protospacer
*************************************

11. spacer 2.1|1188965|34|NZ_AP020313|CRISPRCasFinder matches to position: 624156-624189, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

12. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 996709-996745, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttacattgtctgtagaaattgggaatccaatttc	Protospacer
*****.*******************************

13. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 2380007-2380043, mismatch: 1, identity: 0.973

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctctagaaattgggaatccaatttc	Protospacer
************** **********************

14. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 444605-444641, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattatagtaagctgacttttcgtcagct	Protospacer
************** **********************

15. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 624115-624151, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgacttttcgtcatct	Protospacer
********************************** **

16. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 2264134-2264170, mismatch: 1, identity: 0.973

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aactcgcacattattgtaagctgacttttcgtcagct	Protospacer
****.********************************

17. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 259373-259409, mismatch: 1, identity: 0.973

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcttttcgaaattc	Protospacer
*****************************.*******

18. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 714066-714102, mismatch: 1, identity: 0.973

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcttttcgaaattc	Protospacer
*****************************.*******

19. spacer 6.2|2546310|36|NZ_AP020313|CRT matches to position: 259378-259413, mismatch: 1, identity: 0.972

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacagacaatgca	Protospacer
***********.************************

20. spacer 1.1|922168|37|NZ_AP020313|CRT matches to position: 926136-926172, mismatch: 2, identity: 0.946

aacttgcattgtctgtagaaattgggaatccaatttc	CRISPR spacer
aacttgcattgtctgtagaaattggggttccaatttc	Protospacer
**************************. *********

21. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 103533-103569, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacctgcacattatcgtaagctgacttttcgtcagct	Protospacer
***.**********.**********************

22. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 922112-922148, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

23. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 926192-926228, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacatttttgtaagctgacttttcgccagct	Protospacer
************ ******************.*****

24. spacer 1.2|922224|37|NZ_AP020313|CRT matches to position: 1238508-1238544, mismatch: 2, identity: 0.946

aacttgcacattattgtaagctgacttttcgtcagct	CRISPR spacer
aacttgcacattattgtaagctgactttccgccagct	Protospacer
****************************.**.*****

25. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 92727-92763, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtctgtagaatttcctttcgaaattc	Protospacer
*************************.***.*******

26. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 444663-444699, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

27. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 1188925-1188961, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

28. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 1243887-1243923, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtttgtagaatttcttttcgaaattc	Protospacer
*************.***************.*******

29. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 1243942-1243978, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtttgtagaatttcttttcgaaattc	Protospacer
*************.***************.*******

30. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 2100164-2100200, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgtttgtagaatttcttttcgaaattc	Protospacer
*************.***************.*******

31. spacer 1.3|922280|37|NZ_AP020313|CRT matches to position: 2354725-2354761, mismatch: 2, identity: 0.946

caacttgcattgtctgtagaatttctttttgaaattc	CRISPR spacer
caacttgcattgcctgtagaatttcttttcgaaattc	Protospacer
************.****************.*******

32. spacer 6.1|2546254|33|NZ_AP020313|CRT matches to position: 103470-103502, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

33. spacer 6.1|2546254|33|NZ_AP020313|CRT matches to position: 1238504-1238536, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctggcggaaagtcagcttacaataatg	Protospacer
*********.*.*********************

34. spacer 6.1|2546254|33|NZ_AP020313|CRT matches to position: 2264130-2264162, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

35. spacer 6.2|2546310|36|NZ_AP020313|CRT matches to position: 92723-92758, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaggaaattctacagacaatgca	Protospacer
***********.***.********************

36. spacer 6.2|2546310|36|NZ_AP020313|CRT matches to position: 444659-444694, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacaggcaatgca	Protospacer
***********.****************.*******

37. spacer 6.3|2546369|33|NZ_AP020313|CRT matches to position: 103470-103502, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

38. spacer 6.3|2546369|33|NZ_AP020313|CRT matches to position: 624111-624143, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagatgacgaaaagtcagcttacaataatg	Protospacer
******.*************** **********

39. spacer 6.3|2546369|33|NZ_AP020313|CRT matches to position: 2264130-2264162, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 54897 59 Staphylococcus_phage(90.62%) head,portal,holin,protease,transposase,tail,integrase,capsid attL 42546:42561|attR 57085:57100
DBSCAN-SWA_2 58753 : 60318 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 66939 : 68969 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_4 72999 : 75283 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_5 78985 : 85752 5 Gordonia_phage(33.33%) NA NA
DBSCAN-SWA_6 92869 : 97898 5 Catovirus(33.33%) NA NA
DBSCAN-SWA_7 101349 : 101763 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_8 106873 : 107503 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_9 122987 : 124724 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_10 141084 : 194627 52 Staphylococcus_phage(86.96%) tRNA,protease NA
DBSCAN-SWA_11 202543 : 238404 41 Staphylococcus_phage(88.24%) protease,transposase NA
DBSCAN-SWA_12 241564 : 255678 7 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_13 267330 : 272658 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_14 281563 : 283270 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_15 289886 : 292517 2 Cronobacter_phage(50.0%) tRNA NA
DBSCAN-SWA_16 296286 : 300421 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_17 317961 : 321159 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_18 326092 : 327850 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_19 334711 : 342875 5 Feldmannia_irregularis_virus(25.0%) NA NA
DBSCAN-SWA_20 346789 : 357942 12 Brevibacillus_phage(20.0%) tRNA,protease NA
DBSCAN-SWA_21 367509 : 374156 4 Catovirus(50.0%) integrase,tRNA attL 368481:368497|attR 380570:380586
DBSCAN-SWA_22 377487 : 378219 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_23 386578 : 421958 31 uncultured_Mediterranean_phage(13.33%) tRNA NA
DBSCAN-SWA_24 428630 : 431017 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_25 438286 : 444450 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_26 447940 : 451048 2 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_27 457518 : 458466 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_28 461519 : 475247 13 Klosneuvirus(25.0%) tRNA NA
DBSCAN-SWA_29 481420 : 482044 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_30 487588 : 490400 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_31 497900 : 504471 6 Indivirus(66.67%) NA NA
DBSCAN-SWA_32 511300 : 512707 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_33 517353 : 518838 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_34 522367 : 530652 10 Klosneuvirus(20.0%) NA NA
DBSCAN-SWA_35 538358 : 541037 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_36 550461 : 555928 7 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_37 559590 : 560166 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_38 563536 : 571042 5 unidentified_phage(25.0%) tRNA NA
DBSCAN-SWA_39 574782 : 575460 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_40 584734 : 585613 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_41 624293 : 633683 13 Staphylococcus_phage(60.0%) NA NA
DBSCAN-SWA_42 637091 : 639103 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_43 645268 : 646060 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_44 650540 : 655571 7 Lactobacillus_phage(33.33%) lysis NA
DBSCAN-SWA_45 662714 : 667563 4 Lactococcus_phage(66.67%) transposase NA
DBSCAN-SWA_46 671587 : 675041 3 Indivirus(50.0%) NA NA
DBSCAN-SWA_47 678455 : 679157 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_48 686678 : 689033 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_49 693351 : 694614 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_50 704273 : 708667 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_51 714486 : 716133 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_52 719802 : 720924 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_53 725073 : 730729 6 Phage_Wrath(25.0%) NA NA
DBSCAN-SWA_54 740865 : 745141 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_55 751453 : 756113 8 Staphylococcus_phage(80.0%) capsid NA
DBSCAN-SWA_56 761182 : 761659 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_57 767601 : 774073 4 Acanthocystis_turfacea_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_58 783487 : 784531 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_59 788732 : 794402 4 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_60 799416 : 811229 9 Klosneuvirus(33.33%) tRNA NA
DBSCAN-SWA_61 815527 : 816298 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_62 821072 : 834743 11 Erwinia_phage(16.67%) tRNA,protease NA
DBSCAN-SWA_63 848127 : 850185 3 Acanthamoeba_polyphaga_mimivirus(33.33%) NA NA
DBSCAN-SWA_64 860555 : 862550 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_65 865697 : 866633 1 Prochlorococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_66 871645 : 873902 3 Methanothermobacter_phage(50.0%) NA NA
DBSCAN-SWA_67 877216 : 877828 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_68 881795 : 886406 4 Halovirus(33.33%) NA NA
DBSCAN-SWA_69 890869 : 893623 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_70 913219 : 913408 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_71 922490 : 924450 3 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 938508 : 943066 3 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_73 947807 : 948866 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_74 960813 : 963721 5 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_75 975238 : 977086 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_76 985223 : 994056 9 Mycoplasma_phage(25.0%) NA NA
DBSCAN-SWA_77 1000170 : 1004550 5 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_78 1007729 : 1022489 14 Prochlorococcus_phage(22.22%) NA NA
DBSCAN-SWA_79 1032886 : 1036657 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_80 1040323 : 1041334 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_81 1049715 : 1049931 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_82 1054496 : 1055138 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_83 1065333 : 1070541 3 Pithovirus(33.33%) NA NA
DBSCAN-SWA_84 1089470 : 1091279 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_85 1098074 : 1099061 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_86 1102712 : 1104726 2 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_87 1113321 : 1120131 4 Micromonas_sp._RCC1109_virus(33.33%) NA NA
DBSCAN-SWA_88 1125248 : 1128902 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_89 1139056 : 1146044 6 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_90 1155964 : 1159592 3 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_91 1163635 : 1166304 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_92 1179424 : 1182947 3 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_93 1186433 : 1190640 4 Planktothrix_phage(50.0%) integrase attL 1182209:1182223|attR 1197083:1197097
DBSCAN-SWA_94 1193971 : 1202489 11 Streptococcus_phage(60.0%) NA NA
DBSCAN-SWA_95 1205873 : 1207117 2 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_96 1218816 : 1224967 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_97 1234024 : 1239843 5 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_98 1244288 : 1247135 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_99 1250453 : 1251293 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_100 1257371 : 1263082 5 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_101 1272364 : 1295815 19 uncultured_Caudovirales_phage(35.71%) NA NA
DBSCAN-SWA_102 1298954 : 1308800 12 Pandoravirus(12.5%) NA NA
DBSCAN-SWA_103 1320412 : 1321786 1 Bandra_megavirus(100.0%) NA NA
DBSCAN-SWA_104 1326763 : 1333043 6 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_105 1339971 : 1340445 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_106 1345707 : 1346505 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_107 1351336 : 1352098 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_108 1356472 : 1359664 3 Acanthamoeba_polyphaga_mimivirus(50.0%) transposase NA
DBSCAN-SWA_109 1364839 : 1365637 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_110 1368864 : 1372823 3 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_111 1379757 : 1380501 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_112 1391652 : 1392213 1 Streptococcus_phage(100.0%) integrase attL 1385806:1385820|attR 1395802:1395816
DBSCAN-SWA_113 1405284 : 1408638 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_114 1422188 : 1423511 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_115 1434816 : 1435473 1 Elephant_endotheliotropic_herpesvirus(100.0%) NA NA
DBSCAN-SWA_116 1439114 : 1442435 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_117 1465735 : 1466398 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_118 1472977 : 1474165 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_119 1477193 : 1488147 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_120 1491830 : 1496613 8 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_121 1502624 : 1505081 1 Escherichia_phage(100.0%) protease NA
DBSCAN-SWA_122 1523889 : 1534161 10 Catovirus(16.67%) tRNA NA
DBSCAN-SWA_123 1543417 : 1545882 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_124 1551764 : 1554862 2 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_125 1558768 : 1559386 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_126 1568242 : 1569940 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_127 1586588 : 1592826 6 Lactobacillus_phage(33.33%) NA NA
DBSCAN-SWA_128 1619015 : 1621776 2 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_129 1635391 : 1640841 5 Paenibacillus_phage(25.0%) transposase NA
DBSCAN-SWA_130 1649801 : 1651325 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_131 1660182 : 1681588 31 Staphylococcus_phage(79.17%) coat,terminase,integrase attL 1659300:1659314|attR 1674321:1674335
DBSCAN-SWA_132 1691506 : 1692349 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_133 1713561 : 1716296 3 Bodo_saltans_virus(50.0%) NA NA
DBSCAN-SWA_134 1734527 : 1735205 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_135 1750727 : 1755167 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_136 1767130 : 1768792 2 Amsacta_moorei_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_137 1778082 : 1779519 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_138 1783279 : 1787819 3 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_139 1797146 : 1798190 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_140 1805405 : 1806935 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_141 1815810 : 1817316 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_142 1828063 : 1833422 3 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_143 1843632 : 1845691 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_144 1854226 : 1855819 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_145 1873979 : 1875164 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_146 1880000 : 1890284 3 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_147 1893822 : 1896820 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_148 1900175 : 1902648 2 Catovirus(50.0%) NA NA
DBSCAN-SWA_149 1909483 : 1916047 5 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_150 1920355 : 1920565 1 Lactococcus_phage(100.0%) transposase NA
DBSCAN-SWA_151 1927328 : 1928102 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_152 1936137 : 1936737 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_153 1941674 : 1942655 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_154 1946025 : 1947228 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_155 1955494 : 1959704 4 Lactococcus_phage(50.0%) NA NA
DBSCAN-SWA_156 1995968 : 1997036 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_157 2008241 : 2011241 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_158 2020621 : 2021296 1 Staphylococcus_phage(100.0%) transposase NA
DBSCAN-SWA_159 2026952 : 2036964 7 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_160 2043653 : 2052692 5 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_161 2062774 : 2066039 5 Faecalibacterium_phage(33.33%) NA NA
DBSCAN-SWA_162 2070339 : 2071098 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_163 2085355 : 2087068 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_164 2092693 : 2093707 1 Faustovirus(100.0%) NA NA
DBSCAN-SWA_165 2106098 : 2106791 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_166 2131620 : 2133480 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_167 2159236 : 2160987 2 Ectocarpus_siliculosus_virus(50.0%) NA NA
DBSCAN-SWA_168 2164407 : 2164905 1 Canarypox_virus(100.0%) NA NA
DBSCAN-SWA_169 2169957 : 2172341 2 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_170 2178186 : 2188300 9 Klosneuvirus(50.0%) holin NA
DBSCAN-SWA_171 2216436 : 2220224 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_172 2228657 : 2232513 3 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_173 2241754 : 2244781 2 Enterobacteria_phage(50.0%) protease NA
DBSCAN-SWA_174 2252664 : 2259048 5 Yellowstone_lake_phycodnavirus(33.33%) NA NA
DBSCAN-SWA_175 2268634 : 2269627 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_176 2278907 : 2279603 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_177 2299982 : 2300849 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_178 2308651 : 2313832 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_179 2320653 : 2321349 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_180 2326475 : 2327561 1 Clostridium_phage(100.0%) integrase attL 2322078:2322092|attR 2332696:2332710
DBSCAN-SWA_181 2330892 : 2331624 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_182 2341281 : 2342839 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_183 2349972 : 2354401 4 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_184 2358094 : 2359953 2 Mycoplasma_phage(50.0%) NA NA
DBSCAN-SWA_185 2377679 : 2383865 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_186 2387325 : 2393097 6 Staphylococcus_phage(75.0%) NA NA
DBSCAN-SWA_187 2401041 : 2401773 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_188 2418423 : 2419983 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_189 2441401 : 2442436 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_190 2452295 : 2456192 4 Hokovirus(33.33%) NA NA
DBSCAN-SWA_191 2460771 : 2461980 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_192 2474101 : 2475001 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_193 2482373 : 2482793 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_194 2488486 : 2489368 1 Diadromus_pulchellus_ascovirus(100.0%) NA NA
DBSCAN-SWA_195 2497246 : 2497882 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_196 2511308 : 2515427 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_197 2519343 : 2520147 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_198 2539125 : 2539731 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_199 2551815 : 2554983 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_200 2578446 : 2580113 2 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_201 2585542 : 2594772 9 Vibrio_phage(33.33%) protease NA
DBSCAN-SWA_202 2598148 : 2601243 5 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_203 2607564 : 2608977 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_204 2612937 : 2614500 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_205 2626657 : 2627626 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_206 2645155 : 2646064 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_207 2649654 : 2657091 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_208 2663347 : 2666167 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_209 2678830 : 2682662 4 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_210 2690600 : 2692211 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_211 2700013 : 2707763 9 Bacillus_virus(25.0%) NA NA
DBSCAN-SWA_212 2718167 : 2718563 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_213 2724733 : 2725381 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_214 2732581 : 2734102 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_215 2739789 : 2741817 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_216 2746967 : 2750352 5 Clostridium_botulinum_C_phage(50.0%) NA NA
DBSCAN-SWA_217 2764036 : 2768760 4 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_218 2772520 : 2786366 13 Moraxella_phage(16.67%) tRNA NA
DBSCAN-SWA_219 2793467 : 2796945 4 uncultured_virus(50.0%) terminase NA
DBSCAN-SWA_220 2804416 : 2824693 38 Staphylococcus_phage(97.3%) integrase attL 2807259:2807273|attR 2816185:2816199
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_AP020313.1|WP_001790641.1|1283298_1283400_-|hypothetical-protein 1283298_1283400_- 33 aa aa NA NA NA 1272364-1295815 yes
2. NZ_AP020314
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 1820 2 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_2 4828 : 5455 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_3 15486 : 25642 13 Staphylococcus_phage(50.0%) transposase NA
DBSCAN-SWA_4 31252 : 34011 3 Enterobacteria_phage(50.0%) transposase,integrase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage