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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029196 Streptomyces venezuelae strain ATCC 21113 chromosome, complete genome 24 crisprs csa3,WYL,DEDDh,cas4,cas3,DinG 4 9 2 0

Results visualization

1. NZ_CP029196
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_1 503668-503758 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_2 862286-862432 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_3 1564195-1565013 Orphan NA
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_4 2201683-2201753 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_5 2301014-2301118 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_6 2400635-2400695 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_7 3010174-3010321 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_8 3229632-3229776 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_9 3345210-3345470 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_10 3481591-3481694 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_12 4337545-4337612 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_11 4337404-4337481 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_13 4632949-4633040 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_14 4670754-4670862 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_15 5016095-5016269 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_16 5325995-5326136 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_17 5435614-5435704 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_18 5438494-5438609 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_19 5776411-5776500 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_20 5776624-5776840 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_21 6080660-6080744 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_22 6747413-6747477 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_23 6960722-6960808 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029196_24 7163781-7163873 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP029196_9 9.4|3345378|18|NZ_CP029196|CRT 3345378-3345395 18 NZ_CP029196.1 3838403-3838420 1 0.944
NZ_CP029196_9 9.4|3345378|18|NZ_CP029196|CRT 3345378-3345395 18 NZ_CP029196.1 6915889-6915906 1 0.944
NZ_CP029196_9 9.4|3345378|18|NZ_CP029196|CRT 3345378-3345395 18 NZ_CP029196.1 6915908-6915925 1 0.944
NZ_CP029196_14 14.1|4670779|17|NZ_CP029196|CRISPRCasFinder 4670779-4670795 17 NZ_CP029196.1 3484333-3484349 1 0.941
NZ_CP029196_3 3.4|1564411|36|NZ_CP029196|CRT 1564411-1564446 36 NZ_CP029196.1 1565278-1565313 2 0.944
NZ_CP029196_22 22.1|6747436|19|NZ_CP029196|CRISPRCasFinder 6747436-6747454 19 NZ_CP029196.1 1390986-1391004 2 0.895
NZ_CP029196_22 22.1|6747436|19|NZ_CP029196|CRISPRCasFinder 6747436-6747454 19 NZ_CP029196.1 2335352-2335370 2 0.895

1. spacer 9.4|3345378|18|NZ_CP029196|CRT matches to position: 3838403-3838420, mismatch: 1, identity: 0.944

cgtcgtcgggggactcgt	CRISPR spacer
cgtcgtcgggggagtcgt	Protospacer
************* ****

2. spacer 9.4|3345378|18|NZ_CP029196|CRT matches to position: 6915889-6915906, mismatch: 1, identity: 0.944

cgtcgtcgggggactcgt	CRISPR spacer
cgtcgtcgtgggactcgt	Protospacer
******** *********

3. spacer 9.4|3345378|18|NZ_CP029196|CRT matches to position: 6915908-6915925, mismatch: 1, identity: 0.944

cgtcgtcgggggactcgt	CRISPR spacer
cgtcgtcgtgggactcgt	Protospacer
******** *********

4. spacer 14.1|4670779|17|NZ_CP029196|CRISPRCasFinder matches to position: 3484333-3484349, mismatch: 1, identity: 0.941

ctggtgcggccggttcc	CRISPR spacer
ctggtgcggacggttcc	Protospacer
********* *******

5. spacer 3.4|1564411|36|NZ_CP029196|CRT matches to position: 1565278-1565313, mismatch: 2, identity: 0.944

tcgcggcggaagccaccaccgcggttgtcgccacca	CRISPR spacer
tcgcggcggaagccaccgccacggttgtcgccacca	Protospacer
*****************.**.***************

6. spacer 22.1|6747436|19|NZ_CP029196|CRISPRCasFinder matches to position: 1390986-1391004, mismatch: 2, identity: 0.895

agcgacccggcgagcgacc	CRISPR spacer
agcggcccggcgagcggcc	Protospacer
****.***********.**

7. spacer 22.1|6747436|19|NZ_CP029196|CRISPRCasFinder matches to position: 2335352-2335370, mismatch: 2, identity: 0.895

agcgacccggcgagcgacc	CRISPR spacer
agcgacccggcgagggtcc	Protospacer
************** * **

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019460 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence 13806-13830 3 0.88
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019460 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence 29282-29306 3 0.88
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 126977-127001 3 0.88
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP004394 Celeribacter indicus strain P73 plasmid pP73A, complete sequence 6932-6956 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019459 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence 13924-13948 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019459 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence 29524-29548 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019459 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence 45124-45148 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019461 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed4, complete sequence 5820-5844 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019462 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed5, complete sequence 5809-5833 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019463 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed6, complete sequence 5426-5450 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP019464 Streptomyces autolyticus strain CGMCC0516 plasmid unnamed7, complete sequence 8575-8599 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 1009045-1009069 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 497428-497452 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP029358 Azospirillum sp. CFH 70021 plasmid unnamed3 56879-56903 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 CP007644 Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence 479774-479798 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NC_012811 Methylorubrum extorquens AM1 megaplasmid, complete sequence 360071-360095 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 804032-804056 4 0.84
NZ_CP029196_4 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder 2201706-2201730 25 NZ_CP030828 Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence 569015-569039 4 0.84
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NZ_CP032349 Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence 569372-569397 4 0.846
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NZ_CP032325 Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence 454005-454030 4 0.846
NZ_CP029196_8 8.2|3229752|24|NZ_CP029196|PILER-CR 3229752-3229775 24 NC_008195 Mycobacterium phage Cooper, complete genome 63962-63985 4 0.833
NZ_CP029196_8 8.2|3229752|24|NZ_CP029196|PILER-CR 3229752-3229775 24 NC_042034 Mycobacterium phage ChrisnMich, complete sequence 63528-63551 4 0.833
NZ_CP029196_8 8.2|3229752|24|NZ_CP029196|PILER-CR 3229752-3229775 24 KF279411 Mycobacterium phage Adawi, complete genome 63460-63483 4 0.833
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NC_006462 Thermus thermophilus HB8 plasmid pTT27, complete sequence 187668-187694 5 0.815
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NC_005838 Thermus thermophilus HB27 plasmid pTT27, complete sequence 131515-131541 5 0.815
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NZ_AP019802 Thermus thermophilus strain HC11 plasmid pHC11, complete sequence 104382-104408 5 0.815
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1159842-1159868 5 0.815
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NZ_CP041652 Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence 82605-82631 5 0.815
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NC_047992 Microbacterium phage Zeta1847, complete genome 40035-40061 5 0.815
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NZ_CP044425 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence 55896-55921 5 0.808
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NC_014309 Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome 432779-432804 5 0.808
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NZ_CP007575 Streptomyces albulus strain NK660 plasmid pNKL, complete sequence 8869-8894 5 0.808
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 MT114163 Mycobacterium phage Settecandela, complete genome 44028-44053 5 0.808
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 MK937592 Mycobacterium phage Phrappuccino, complete genome 44028-44053 5 0.808
NZ_CP029196_7 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder 3010202-3010227 26 NZ_CP022369 Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence 12543-12568 5 0.808
NZ_CP029196_2 2.3|862385|27|NZ_CP029196|CRT 862385-862411 27 NZ_CP013069 Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence 18211-18237 6 0.778
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_AP018921 Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence 233508-233545 7 0.816
NZ_CP029196_9 9.3|3345330|30|NZ_CP029196|CRT 3345330-3345359 30 NC_023282 Streptomyces sp. FR1 plasmid pFRL2, complete sequence 41652-41681 7 0.767
NZ_CP029196_17 17.1|5435645|29|NZ_CP029196|CRISPRCasFinder 5435645-5435673 29 NZ_CP025962 Rhodococcus qingshengii strain djl-6-2 plasmid pDJL3, complete sequence 486-514 7 0.759
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NC_010311 Streptomyces sp. HK1 plasmid pSHK1, complete sequence 184827-184864 9 0.763
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_CP030772 Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence 713045-713082 9 0.763
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 CP000663 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence 97641-97678 9 0.763
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_CP031752 Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence 43743-43780 9 0.763
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_CP046568 Dietzia sp. DQ12-45-1b plasmid pI, complete sequence 55754-55791 9 0.763
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 720610-720647 9 0.763
NZ_CP029196_21 21.1|6080685|35|NZ_CP029196|CRISPRCasFinder 6080685-6080719 35 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 52215-52249 9 0.743
NZ_CP029196_23 23.1|6960748|35|NZ_CP029196|CRISPRCasFinder 6960748-6960782 35 NC_017791 Deinococcus gobiensis I-0 plasmid P2, complete sequence 373098-373132 9 0.743
NZ_CP029196_7 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder 3010256-3010293 38 NZ_CP044425 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence 131416-131453 11 0.711

1. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaagcgacccggcggcg	Protospacer
 * *********************.

2. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaagcgacccggcggcg	Protospacer
 * *********************.

3. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 3, identity: 0.88

cccggccggaagcgacccggcggca	CRISPR spacer
cgcggccggcagcgccccggcggca	Protospacer
* ******* **** **********

4. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP004394 (Celeribacter indicus strain P73 plasmid pP73A, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
cccggccggaatcgacccggcgctt	Protospacer
*********** ********** . 

5. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

6. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

7. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019459 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

8. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019461 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

9. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019462 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

10. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019463 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed6, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

11. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP019464 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed7, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gcgggccggaatcgacccggcggcg	Protospacer
 * ******** ************.

12. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
cccggccgggggcgacccggcgggc	Protospacer
*********..************  

13. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
cgcacccggaagcgacccggcggcc	Protospacer
* *. ******************* 

14. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
gccggacggaagcgagccggcggct	Protospacer
 **** ********* ******** 

15. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
agcggcaggaagcgtcccggcggca	Protospacer
  **** ******* **********

16. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
cccggccggaagcgtgccggcggac	Protospacer
**************  *******  

17. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
cccggccgggggcgacccggcgggc	Protospacer
*********..************  

18. spacer 4.1|2201706|25|NZ_CP029196|CRISPRCasFinder matches to NZ_CP030828 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750a, complete sequence) position: , mismatch: 4, identity: 0.84

cccggccggaagcgacccggcggca	CRISPR spacer
tccggccggtagcgatccggcggcc	Protospacer
.******** *****.******** 

19. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 4, identity: 0.846

tcccggccgtcaagccggtcccggct	CRISPR spacer
ccccggccgccaagccggtgccggcc	Protospacer
.********.********* *****.

20. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 4, identity: 0.846

tcccggccgtcaagccggtcccggct	CRISPR spacer
ccccggccgccaagccggtgccggcg	Protospacer
.********.********* ***** 

21. spacer 8.2|3229752|24|NZ_CP029196|PILER-CR matches to NC_008195 (Mycobacterium phage Cooper, complete genome) position: , mismatch: 4, identity: 0.833

cagcggtggcacggcctccacgga	CRISPR spacer
tcgcggtggcagggcctccacggt	Protospacer
. ********* *********** 

22. spacer 8.2|3229752|24|NZ_CP029196|PILER-CR matches to NC_042034 (Mycobacterium phage ChrisnMich, complete sequence) position: , mismatch: 4, identity: 0.833

cagcggtggcacggcctccacgga	CRISPR spacer
tcgcggtggcagggcctccacggt	Protospacer
. ********* *********** 

23. spacer 8.2|3229752|24|NZ_CP029196|PILER-CR matches to KF279411 (Mycobacterium phage Adawi, complete genome) position: , mismatch: 4, identity: 0.833

cagcggtggcacggcctccacgga	CRISPR spacer
tcgcggtggcagggcctccacggt	Protospacer
. ********* *********** 

24. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NC_006462 (Thermus thermophilus HB8 plasmid pTT27, complete sequence) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
cacctcccccgcctcccccgggcccac	Protospacer
  .* ********************* 

25. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NC_005838 (Thermus thermophilus HB27 plasmid pTT27, complete sequence) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
cacctcccccgcctcccccgggcccac	Protospacer
  .* ********************* 

26. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NZ_AP019802 (Thermus thermophilus strain HC11 plasmid pHC11, complete sequence) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
cacctcccccgcctcccccgggcccac	Protospacer
  .* ********************* 

27. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
cggcacccccgcctcccccgcgcccgg	Protospacer
   ***************** ****.*

28. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NZ_CP041652 (Streptomyces sp. RLB1-9 plasmid pRLB1-9.2, complete sequence) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
gctcacccccgcctccgcggggcggac	Protospacer
**************** * ****  * 

29. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NC_047992 (Microbacterium phage Zeta1847, complete genome) position: , mismatch: 5, identity: 0.815

gctcacccccgcctcccccgggcccag	CRISPR spacer
catcgcccccgcctcccccgcgcccgg	Protospacer
  **.*************** ****.*

30. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
ggtcggccgtcaagccggtccaggcg	Protospacer
  .****************** *** 

31. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
acgcggccggcaagccggtcccgggc	Protospacer
 * ****** ************** .

32. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NZ_CP007575 (Streptomyces albulus strain NK660 plasmid pNKL, complete sequence) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
gcccgaccgacaagccggtcccgggc	Protospacer
 ****.*** ************** .

33. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to MT114163 (Mycobacterium phage Settecandela, complete genome) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
caccgccggtcaagccggtcccggcg	Protospacer
. *** * ***************** 

34. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to MK937592 (Mycobacterium phage Phrappuccino, complete genome) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
caccgccggtcaagccggtcccggcg	Protospacer
. *** * ***************** 

35. spacer 7.1|3010202|26|NZ_CP029196|CRISPRCasFinder matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 5, identity: 0.808

tcccggccgtcaagccggtcccggct	CRISPR spacer
cgccggccgccaagccggtgccggcg	Protospacer
. *******.********* ***** 

36. spacer 2.3|862385|27|NZ_CP029196|CRT matches to NZ_CP013069 (Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete sequence) position: , mismatch: 6, identity: 0.778

gctcacccccgcctcccccgggcccag	CRISPR spacer
gctcaccctcgcctcccccggacttga	Protospacer
********.************.*....

37. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_AP018921 (Pseudonocardia autotrophica strain NBRC 12743 plasmid pPA12743CP, complete sequence) position: , mismatch: 7, identity: 0.816

ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
ccccggccccggcccccgccccggcccccgccctggtc	Protospacer
*************.******** ********* * .  

38. spacer 9.3|3345330|30|NZ_CP029196|CRT matches to NC_023282 (Streptomyces sp. FR1 plasmid pFRL2, complete sequence) position: , mismatch: 7, identity: 0.767

ggtggtcggcgggggttcctccgtcgtcgg	CRISPR spacer
ccggatcggcgtgggttcctccgtcgccgt	Protospacer
   *.****** **************.** 

39. spacer 17.1|5435645|29|NZ_CP029196|CRISPRCasFinder matches to NZ_CP025962 (Rhodococcus qingshengii strain djl-6-2 plasmid pDJL3, complete sequence) position: , mismatch: 7, identity: 0.759

cgccagtcgtaggcgacttcgaggcagtt	CRISPR spacer
acccagtctttggcgacttcgaggctttc	Protospacer
  ****** * **************  *.

40. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 9, identity: 0.763

------ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
agaccgcccccgcccccgcccccgcccccgcccccgcc------	Protospacer
      **** ***** **.******************      

41. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 9, identity: 0.763

------ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
gccgcgcccccgcccccgcccccgcccccgcccccgcc------	Protospacer
      **** ***** **.******************      

42. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to CP000663 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, complete sequence) position: , mismatch: 9, identity: 0.763

ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
ccccggcccctgctccggcccccgccccggtgggggcg	Protospacer
********** ***** *********** *. *  . *

43. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_CP031752 (Rhodobacter sphaeroides strain EBL0706 plasmid p.A, complete sequence) position: , mismatch: 9, identity: 0.763

ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
ccccggcccctgctccggcccccgccccggtgggggcg	Protospacer
********** ***** *********** *. *  . *

44. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_CP046568 (Dietzia sp. DQ12-45-1b plasmid pI, complete sequence) position: , mismatch: 9, identity: 0.763

ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
ccccggccccggctcccgcgccagccccggtcccggcg	Protospacer
******************* ** ***** *.* . . *

45. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 9, identity: 0.763

ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
gtcccaccacggctcccgcctccgcccccgccgcgaaa	Protospacer
 .** .** ***********.************. **.

46. spacer 21.1|6080685|35|NZ_CP029196|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.743

ctaccgctgctgtagctggacttgtgccaggagag	CRISPR spacer
tgtgcgctgctgtagctggacttgaaccaaccgag	Protospacer
.   ******************** .***.  ***

47. spacer 23.1|6960748|35|NZ_CP029196|CRISPRCasFinder matches to NC_017791 (Deinococcus gobiensis I-0 plasmid P2, complete sequence) position: , mismatch: 9, identity: 0.743

tacgcctgacgaaccgcctcccggccgggcctggc	CRISPR spacer
tacgcctgacggaccgcctcgcggcgcgcaccctc	Protospacer
***********.******** ****  *  *.  *

48. spacer 7.2|3010256|38|NZ_CP029196|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 11, identity: 0.711

------ccccggccccggctcccgcccccgcccccgccgtcaag	CRISPR spacer
ctccggcccccgctccggcccccgcccccgctccggcc------	Protospacer
      **** **.*****.***********.** ***      

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1528700 : 1535816 8 Bacillus_virus(14.29%) NA NA
DBSCAN-SWA_2 4569711 : 4588017 14 Streptomyces_phage(72.73%) tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage