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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP044054 Burkholderia multivorans strain FDAARGOS_623 chromosome 2, complete sequence 1 crisprs DEDDh,csa3,cas3,WYL,DinG 0 0 7 0
NZ_CP044055 Burkholderia multivorans strain FDAARGOS_623 chromosome 3, complete sequence 2 crisprs csa3,cas3,DinG 0 1 141 0
NZ_CP044053 Burkholderia multivorans strain FDAARGOS_623 chromosome 1, complete sequence 0 crisprs csa3 0 0 0 0

Results visualization

1. NZ_CP044054
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044054_1 3206065-3206135 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 497061 : 559333 45 Ralstonia_phage(23.08%) integrase,transposase,capsid,plate attL 496913:496967|attR 509175:509229
DBSCAN-SWA_2 850251 : 858510 8 Yaba_monkey_tumor_virus(16.67%) NA NA
DBSCAN-SWA_3 1130568 : 1139538 7 unidentified_phage(16.67%) NA NA
DBSCAN-SWA_4 1400926 : 1458682 50 Pseudomonas_phage(22.22%) tRNA,transposase,plate NA
DBSCAN-SWA_5 1880948 : 1978455 106 Burkholderia_phage(78.95%) tRNA,terminase,plate,capsid,tail,portal,integrase,protease,head,holin attL 1908403:1908450|attR 1946701:1946748
DBSCAN-SWA_6 2735167 : 2802394 58 Burkholderia_virus(14.29%) transposase NA
DBSCAN-SWA_7 2812013 : 2855787 39 uncultured_virus(25.0%) plate,transposase,capsid NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP044055
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044055_1 209319-209428 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044055_2 886473-886777 Orphan NA
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP044055_2 2.4|886718|37|NZ_CP044055|CRISPRCasFinder 886718-886754 37 NZ_CP044332 Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence 200298-200334 11 0.703

1. spacer 2.4|886718|37|NZ_CP044055|CRISPRCasFinder matches to NZ_CP044332 (Methylocystis parvus strain BRCS2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.703

tgcgggcaccgcggccggcaacgccatgggcggccgt	CRISPR spacer
ctccgcggccgggaccggcaacgccatgggcggcttc	Protospacer
. * *  .*** *.********************. .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 3623 2 Mollivirus(100.0%) NA NA
DBSCAN-SWA_2 8279 : 9131 1 Phaeocystis_globosa_virus(100.0%) NA NA
DBSCAN-SWA_3 40887 : 41211 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_4 48751 : 49906 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_5 56696 : 63582 8 Escherichia_phage(25.0%) NA NA
DBSCAN-SWA_6 85131 : 86562 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_7 90263 : 94809 5 Micromonas_sp._RCC1109_virus(66.67%) NA NA
DBSCAN-SWA_8 109101 : 116834 6 Vibrio_phage(25.0%) tRNA NA
DBSCAN-SWA_9 126180 : 132118 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_10 142905 : 143607 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_11 155651 : 156383 1 Bordetella_phage(100.0%) NA NA
DBSCAN-SWA_12 177608 : 182413 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_13 197747 : 213560 13 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_14 217227 : 217848 2 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_15 243781 : 245763 2 Serratia_phage(50.0%) NA NA
DBSCAN-SWA_16 255114 : 260207 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_17 263309 : 265172 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_18 268593 : 269361 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_19 278827 : 283129 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_20 303559 : 305716 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_21 311566 : 315540 4 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_22 324600 : 325581 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_23 339008 : 342794 4 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_24 363098 : 364433 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_25 384428 : 386050 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_26 396864 : 440339 52 Burkholderia_phage(91.49%) plate,integrase,terminase,transposase,head,tail,capsid attL 400597:400615|attR 436264:436282
DBSCAN-SWA_27 470455 : 472543 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_28 509159 : 512218 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_29 533215 : 534937 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_30 544227 : 558777 11 Hokovirus(50.0%) NA NA
DBSCAN-SWA_31 561925 : 563669 2 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_32 570428 : 571823 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_33 577814 : 578768 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_34 584730 : 586751 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_35 590372 : 592748 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_36 604622 : 605822 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_37 621058 : 623217 2 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_38 627237 : 627867 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_39 639671 : 640394 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_40 653684 : 655926 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_41 663986 : 667823 4 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_42 671573 : 672512 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_43 701469 : 703038 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_44 709327 : 713470 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_45 719012 : 720161 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_46 734365 : 735913 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_47 764915 : 766046 1 Edwardsiella_phage(100.0%) NA NA
DBSCAN-SWA_48 792150 : 793671 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_49 798413 : 800422 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_50 832423 : 843626 8 uncultured_Caudovirales_phage(25.0%) NA NA
DBSCAN-SWA_51 853630 : 858264 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_52 892393 : 893236 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_53 906193 : 907582 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_54 911246 : 912053 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_55 915827 : 917303 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_56 921379 : 926964 4 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_57 937586 : 938447 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_58 962022 : 963201 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_59 994385 : 995480 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_60 999990 : 1000542 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_61 1015662 : 1017003 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_62 1020541 : 1024837 3 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_63 1046685 : 1048751 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_64 1056032 : 1057640 1 Pike_perch_iridovirus(100.0%) NA NA
DBSCAN-SWA_65 1083285 : 1084383 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_66 1091465 : 1097575 6 Escherichia_phage(75.0%) NA NA
DBSCAN-SWA_67 1108863 : 1116586 6 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_68 1137222 : 1143916 6 Staphylococcus_phage(33.33%) holin NA
DBSCAN-SWA_69 1151602 : 1152877 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_70 1166356 : 1171447 5 Serratia_phage(50.0%) holin NA
DBSCAN-SWA_71 1178127 : 1178811 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_72 1198670 : 1201004 2 Mollivirus(50.0%) NA NA
DBSCAN-SWA_73 1220289 : 1223366 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_74 1228443 : 1229918 2 Brazilian_cedratvirus(50.0%) NA NA
DBSCAN-SWA_75 1241464 : 1242766 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_76 1245913 : 1247831 2 Clostridium_virus(50.0%) NA NA
DBSCAN-SWA_77 1251981 : 1253688 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_78 1259361 : 1260900 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_79 1270489 : 1274769 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_80 1280360 : 1283260 4 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_81 1305148 : 1307377 1 Organic_Lake_phycodnavirus(100.0%) NA NA
DBSCAN-SWA_82 1312299 : 1314075 1 Ectocarpus_siliculosus_virus(100.0%) NA NA
DBSCAN-SWA_83 1317610 : 1318558 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_84 1341185 : 1341404 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_85 1364723 : 1366691 1 Micromonas_pusilla_virus(100.0%) NA NA
DBSCAN-SWA_86 1386593 : 1392719 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_87 1396280 : 1397771 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_88 1407038 : 1408559 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_89 1417354 : 1418038 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_90 1422133 : 1423429 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_91 1441272 : 1446406 4 Rhodococcus_phage(50.0%) NA NA
DBSCAN-SWA_92 1462242 : 1463595 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_93 1469618 : 1472300 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_94 1476994 : 1479523 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_95 1484743 : 1485025 1 Ralstonia_virus(100.0%) NA NA
DBSCAN-SWA_96 1495579 : 1501329 4 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_97 1505880 : 1507326 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_98 1513259 : 1513910 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_99 1538390 : 1541453 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_100 1549632 : 1550430 1 Mollivirus(100.0%) NA NA
DBSCAN-SWA_101 1587610 : 1589170 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_102 1598089 : 1599780 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_103 1615459 : 1621116 7 Planktothrix_phage(40.0%) NA NA
DBSCAN-SWA_104 1643020 : 1652199 7 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_105 1672938 : 1674252 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_106 1730447 : 1732637 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_107 1749719 : 1754980 2 uncultured_virus(50.0%) transposase NA
DBSCAN-SWA_108 1768250 : 1779975 12 Bacillus_virus(20.0%) integrase attL 1759785:1759801|attR 1779318:1779334
DBSCAN-SWA_109 1793230 : 1799192 4 Micromonas_sp._RCC1109_virus(50.0%) NA NA
DBSCAN-SWA_110 1804955 : 1806737 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_111 1813552 : 1815031 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_112 1829866 : 1831426 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_113 1863346 : 1868701 3 Hokovirus(50.0%) NA NA
DBSCAN-SWA_114 1900316 : 1901114 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_115 1936400 : 1947760 7 uncultured_Caudovirales_phage(25.0%) NA NA
DBSCAN-SWA_116 1971961 : 1972762 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_117 1981691 : 1982759 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_118 1987541 : 1988581 2 Acidithiobacillus_phage(100.0%) NA NA
DBSCAN-SWA_119 2023997 : 2025605 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_120 2057350 : 2058949 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_121 2065855 : 2066443 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_122 2084875 : 2091105 4 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_123 2118291 : 2119866 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_124 2131559 : 2132781 1 Enterobacteria_phage(100.0%) transposase NA
DBSCAN-SWA_125 2153399 : 2155223 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_126 2164098 : 2169589 5 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_127 2173920 : 2176669 4 Bacillus_thuringiensis_phage(50.0%) NA NA
DBSCAN-SWA_128 2182537 : 2186618 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_129 2190311 : 2196964 5 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_130 2202034 : 2203687 1 Catovirus(100.0%) holin NA
DBSCAN-SWA_131 2209436 : 2212741 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_132 2220008 : 2220899 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_133 2243875 : 2244721 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_134 2254119 : 2255508 1 environmental_Halophage(100.0%) NA NA
DBSCAN-SWA_135 2270488 : 2273464 2 Tunisvirus(50.0%) NA NA
DBSCAN-SWA_136 2298423 : 2299644 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_137 2313039 : 2313960 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_138 2317485 : 2327485 7 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_139 2338776 : 2340702 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_140 2352312 : 2354659 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_141 2363295 : 2365439 2 Salmonella_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage