CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP044105	Staphylococcus aureus strain FDAARGOS_660 plasmid unnamed1, complete sequence	0 crisprs	csa3	0	0	2	0
NZ_CP044106	Staphylococcus aureus strain FDAARGOS_660 chromosome, complete genome	13 crisprs	DEDDh,csa3,cas3,DinG,WYL	6	2	218	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 4178

Mycobacterium_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000196697.1\|1410_2310_+	Mph(C) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000583528.1\|2795_3404_+	recombinase family protein	G8I4U3	Mycobacterium_phage	1.0e-13	30.2
WP_001049146.1\|3649_3988_+	hypothetical protein	NA	NA	NA	NA
WP_000797248.1\|3992_4178_+	helix-turn-helix transcriptional regulator	A0A142LP09	Marinitoga_camini_virus	9.9e-05	37.9

DBSCAN-SWA_2

10478 : 22152

Streptococcus_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000119690.1\|10478_10826_+	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	4.9e-13	36.8
WP_001791613.1\|10982_11075_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_000481279.1\|11246_12218_-	oxidoreductase	NA	NA	NA	NA
WP_000418035.1\|12341_12761_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000733287.1\|13286_14132_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	5.7e-31	34.0
WP_001096381.1\|14238_15996_+	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA
WP_000182645.1\|15985_16366_+	penicillinase repressor BlaI	NA	NA	NA	NA
WP_000690637.1\|16629_17208_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.9e-42	51.7
WP_001037130.1\|17430_17616_-	hypothetical protein	NA	NA	NA	NA
WP_001105991.1\|17948_18623_+\|transposase	IS6-like element IS257 family transposase	A0A0N9SKD3	Staphylococcus_phage	6.8e-128	99.6
WP_001096887.1\|19275_20070_-	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_000627290.1\|20162_20705_-	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	8.9e-94	100.0
WP_001105960.1\|21477_22152_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.7e-126	97.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP044106

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044106_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_1

226797-226882

Orphan

Consensus_repeat	Method
ACAATGTAAGTTGGGGTGGGGCCCCAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_1

>merge|NZ_CP044106|1|226797-226882|CRISPRCasFinder
ACAATGTAAGTTGGGGTGGGGCCCCAACATAGAGAATTTCGAAAAGAAATTCTACAAACAATGTAAGTTGGGGTGGGGCCTCAACA

>NZ_CP044106|1|1|226797-226882|CRISPRCasFinder
ACAATGTAAGTTGGGGTGGGGCCCCAACA	TAGAGAATTTCGAAAAGAAATTCTACAA
ACAATGTAAGTTGGGGTGGGGCCTCAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000791403.1\|228755_229811_+\|bi-component-leukocidin-LukGH-subunit-H	unknown	unknown	gnl\|CDD\|369625
NZ_CP044106.1\|WP_000240656.1\|223191_224808_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP044106.1\|WP_000197629.1\|221913_222657_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP044106.1\|WP_001068527.1\|234738_236025_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_CP044106.1\|WP_001823225.1\|217987_218122_+\|delta-lysin-family-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|173213
NZ_CP044106.1\|WP_000522383.1\|219866_220493_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|226090
NZ_CP044106.1\|WP_000990056.1\|236224_236323_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000917289.1\|222831_223116_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP044106.1\|WP_001045084.1\|225348_226656_-\|TrkH-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223246
NZ_CP044106.1\|WP_000239607.1\|231341_232334_-\|sphingomyelin-phosphodiesterase	unknown	unknown	gnl\|CDD\|132436
NZ_CP044106.1\|WP_001093929.1\|217045_217186_-\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|368676
NZ_CP044106.1\|WP_000991298.1\|237658_238555_+\|phenol-soluble-modulin-export-ABC-transporter-ATP-binding-protein-PmtA	unknown	unknown	gnl\|CDD\|224054
NZ_CP044106.1\|WP_150344364.1\|218720_219506_-\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
NZ_CP044106.1\|WP_000691584.1\|237281_237662_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP044106.1\|WP_001105712.1\|217182_217752_-\|accessory-gene-regulator-AgrB	unknown	unknown	gnl\|CDD\|214819
NZ_CP044106.1\|WP_000681969.1\|236564_236741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000645729.1\|238555_239236_+\|phenol-soluble-modulin-export-ABC-transporter-permease-subunit-PmtB	unknown	unknown	gnl\|CDD\|379133
NZ_CP044106.1\|WP_000595398.1\|229832_230849_+\|bi-component-leukocidin-LukGH-subunit-G	unknown	unknown	gnl\|CDD\|369625
NZ_CP044106.1\|WP_000120338.1\|220689_221889_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236768
NZ_CP044106.1\|WP_000206634.1\|227096_228320_-\|ArgE/DapE-family-deacylase	unknown	unknown	gnl\|CDD\|181490

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000791403.1\|228755_229811_+\|bi-component-leukocidin-LukGH-subunit-H	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	1.0236e-77
NZ_CP044106.1\|WP_000240656.1\|223191_224808_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP044106.1\|WP_000197629.1\|221913_222657_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	2.12966e-11
NZ_CP044106.1\|WP_001068527.1\|234738_236025_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	0
NZ_CP044106.1\|WP_001823225.1\|217987_218122_+\|delta-lysin-family-phenol-soluble-modulin	gnl\|CDD\|173213	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin.	4.75617e-14
NZ_CP044106.1\|WP_000522383.1\|219866_220493_-\|nitroreductase-family-protein	gnl\|CDD\|226090	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only].	4.41942e-115
NZ_CP044106.1\|WP_000917289.1\|222831_223116_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	5.94304e-45
NZ_CP044106.1\|WP_001045084.1\|225348_226656_-\|TrkH-family-potassium-uptake-protein	gnl\|CDD\|223246	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	1.39244e-80
NZ_CP044106.1\|WP_000239607.1\|231341_232334_-\|sphingomyelin-phosphodiesterase	gnl\|CDD\|132436	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins. [Cellular processes, Pathogenesis].	2.38027e-136
NZ_CP044106.1\|WP_001093929.1\|217045_217186_-\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|368676	pfam05931, AgrD, Staphylococcal AgrD protein. This family consists of several AgrD proteins from many Staphylococcus species. The agr locus was initially described in Staphylococcus aureus as an element controlling the production of exoproteins implicated in virulence. Its pattern of action has been shown to be complex, upregulating certain extracellular toxins and enzymes expressed post-exponentially and repressing some exponential-phase surface components. AgrD encodes the precursor of the autoinducing peptide (AIP).The AIP derived from AgrD by the action of AgrB interacts with AgrC in the membrane to activate AgrA, which upregulates transcription both from promoter P2, amplifying the response, and from P3, initiating the production of a novel effector: RNAIII. In S. aureus, delta-hemolysin is the only translation product of RNA III and is not involved in the regulatory functions of the transcript, which is therefore the primary agent for modulating the expression of other operons controlled by agr.	4.80574e-21
NZ_CP044106.1\|WP_000991298.1\|237658_238555_+\|phenol-soluble-modulin-export-ABC-transporter-ATP-binding-protein-PmtA	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.46612e-72
NZ_CP044106.1\|WP_150344364.1\|218720_219506_-\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	1.29386e-126
NZ_CP044106.1\|WP_000691584.1\|237281_237662_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	7.00479e-47
NZ_CP044106.1\|WP_001105712.1\|217182_217752_-\|accessory-gene-regulator-AgrB	gnl\|CDD\|214819	smart00793, AgrB, Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein. AgrB is involved in the proteolytic processing of AgrD and may have both proteolytic enzyme activity and a transporter facilitating the export of the processed AgrD peptide.	1.73876e-47
NZ_CP044106.1\|WP_000645729.1\|238555_239236_+\|phenol-soluble-modulin-export-ABC-transporter-permease-subunit-PmtB	gnl\|CDD\|379133	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.19015e-11
NZ_CP044106.1\|WP_000595398.1\|229832_230849_+\|bi-component-leukocidin-LukGH-subunit-G	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	2.97231e-99
NZ_CP044106.1\|WP_000120338.1\|220689_221889_+\|hypothetical-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	1.18035e-10
NZ_CP044106.1\|WP_000206634.1\|227096_228320_-\|ArgE/DapE-family-deacylase	gnl\|CDD\|181490	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed.	0

>NZ_CP044106.1|WP_001045084.1|225348_226656_-|TrkH-family-potassium-uptake-protein
MNKVHKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFIASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNRFLIMVTWNIDEPGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTSVSAFNNAGFALFKNNLIDYSSDPIVIITTSILIIFGGIGHFVVIDFINCKKLSKLSLHSKLVLTTTSILIIIGAITFFLLEQFNTMQNMGLVEKIGNSFFQSVTTRTAGFNSIDIAIINKSTALMLMLLMFIGGAPLSAAGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISDKHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYHGITKIIIIFVMLCGKVGLLTLLRTFIPPKSPKNYRYTKGQIYL
>NZ_CP044106.1|WP_000240656.1|223191_224808_+|chaperonin-GroEL
MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIELEDPYENMGANLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYISEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNIYQKVSEIEAEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEKNNDQPNMGGMPGMM
>NZ_CP044106.1|WP_000917289.1|222831_223116_+|co-chaperone-GroES
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
>NZ_CP044106.1|WP_000197629.1|221913_222657_-|CPBP-family-intramembrane-metalloprotease
MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIYIQLVLFLIAATTIILINLKIKNPTKLELEVKEHKKYIIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNRIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP
>NZ_CP044106.1|WP_000120338.1|220689_221889_+|hypothetical-protein
MSYHWFTKMLLSTSILILSSSSLGLATDTVEAKDNLNGEKPTTNLNHNVTSPSVNSEINNNETGTPPESNQTGNEGTDSNSRDANPDSNNVKPDSNNQNPSPDSKPDPNNPNPVPNPKPDPDKPKPNPEPKPDPDNPKPKPDPKPDPKPDPDNPKPKPDPKPDPDKPKPNPNPSPDPNQPGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGNDFVSQRFLALANGAYKYNPYILNQINKLGKDYGEVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQRR
>NZ_CP044106.1|WP_000522383.1|219866_220493_-|nitroreductase-family-protein
MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHAVKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSYGTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYNPLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKSFNPVEDRFVIKK
>NZ_CP044106.1|WP_150344364.1|218720_219506_-|carbon-nitrogen-family-hydrolase
MKVQIYQLPIIFGDSSKNKTQITQWFEKNMNDEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK
>NZ_CP044106.1|WP_001823225.1|217987_218122_+|delta-lysin-family-phenol-soluble-modulin
MSCLILRIFILIKEGVISMAQDIISTISDLVKWIIDTVNKFTKK
>NZ_CP044106.1|WP_001105712.1|217182_217752_-|accessory-gene-regulator-AgrB
MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAKNIGKLIVMYTLAYILNIFLFTLITNLTFYLIRRHAHGAHAPSSFWCYVESILLFILLPLVILNFHINPLIMIILTVISLGVISVYAPAATKKKPIPVRLIKRKKYYAIIVSLTFFIITLIIKEPFAQFIQLGIIIEAITLLPIFFIKEDLK
>NZ_CP044106.1|WP_001093929.1|217045_217186_-|cyclic-lactone-autoinducer-peptide
MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE
>NZ_CP044106.1|WP_000206634.1|227096_228320_-|ArgE/DapE-family-deacylase
MTTFSEKEKIQLLADIVELQTENNNEIDVCNYLKDLFDKYDIKSEILKVNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWTYPPFQLTEKNGKLYGRGTTDMKGGLMALVITLIELKEQNQLPQGTIRLLATAGEEKEQEGAKLLADKGYLEDVDGLIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNQFKEKYSELKKHDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLEFNVRPVPEYDNDFIESFFQNIINNVDSNKLSLDIPSNHRPVTSDKNNKLITTIKDVASSYVDKDDIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKYIDIFKEASIQYLKEK
>NZ_CP044106.1|WP_000791403.1|228755_229811_+|bi-component-leukocidin-LukGH-subunit-H
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSPVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG
>NZ_CP044106.1|WP_000595398.1|229832_230849_+|bi-component-leukocidin-LukGH-subunit-G
MIKQLYKNITICSLAISTVLTVFPATSYAKINSEIKAVSEKNLDGDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDEGKSKFVVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHDVKFVKVLNDNEKK
>NZ_CP044106.1|WP_000239607.1|231341_232334_-|sphingomyelin-phosphodiesterase
MVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLKLVSHNVYMLSTVLYPNWGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASDKLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSGCGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDRKIRAEQMKEISDFVKKKNIPKDETVYIGGDLNVNKGTPEFKDMLKNLNVNDVLYAGHNSTWDPQSNSIAKYNYPNGKPEHLDYIFTDKDHKQPKQLVNEVVTEKPKPWDVYAFPYYYVYNDFSDHYPIKAYSK
>NZ_CP044106.1|WP_001068527.1|234738_236025_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MNPLAQSLNEQLQQSNATAFAMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHEEVTTIVNAIKALADKGTKVIAVVDDAYYGLFYEDVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSIAKAIDDLR
>NZ_CP044106.1|WP_000990056.1|236224_236323_+|hypothetical-protein
MMWWQEGMMTLITGGLLIIFRLWLELKWKNKK
>NZ_CP044106.1|WP_000681969.1|236564_236741_+|hypothetical-protein
MKHLTKIFVVLAIILFIVGYYLQATNHESQGIKLLLAAIMFMICAFISRSNDRRKNNK
>NZ_CP044106.1|WP_000691584.1|237281_237662_+|GntR-family-transcriptional-regulator
MKIILKNNSDFPIYEQIKQQVKQNILKGHVAPGEHLPSMRELAKDLQVSLITTKRAYEDLEKDGFVTTIRGKGTFVKEQDSSILKEKQFFTIENLVKELVNEAQAIEMSLEELQDILTFIYEEESS
>NZ_CP044106.1|WP_000991298.1|237658_238555_+|phenol-soluble-modulin-export-ABC-transporter-ATP-binding-protein-PmtA
MNAIELSNVNYSSDQFNLKNISFKVPQGFVTGFIGRNGAGKTTIIRLIMDLYQPQTGVIRVLEEDMALNPIELKNRIGFVYAENYFNERWTTKQLEKMIAPFYRKWDHQVFEFYLEKFDLPINKSIKTFSTGMKMKLSLAVAFSHHAELYIFDEPTSGLDPLARNELLEIIQQELIDENKTIFMSTHIISDLEKIADYIIHLSDGEVILNGSKEQLLQRYQVVSGAIEDLDDELASLLIFEEHKRTGFIGLTEHAQVFKEILGHKVNITTPSIENLMVYLEKRKPKYHENIKLMEEGF
>NZ_CP044106.1|WP_000645729.1|238555_239236_+|phenol-soluble-modulin-export-ABC-transporter-permease-subunit-PmtB
MKALLIRNFKLRRYTLIIYVLLLTLYPFYIMLDSTKFFYLLQSFISPTILIIWILDAGHLFRLNRRLGGNDSYYFYMSLPVSKKQLLNANYITCIVLTLIGTLVISLYAYEADVIEPNSIYFSTAYAFVISNFLSIPIAFSQFTELRRVKVPYGIYVFTIIILVPFLFSIAIVLVNYFVLSQSSFPDLYSYVLNIGFLIISIVILIVNYFKQLNKINTRKFKGGSR

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Crispr_ID: NZ_CP044106_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_2

286516-286597

Orphan

Consensus_repeat	Method
AATGCAAGTTGGCGGGGCCCCAACA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP044106_2

>merge|NZ_CP044106|2|286516-286597|CRISPRCasFinder
AATGCAAGTTGGCGGGGCCCCAACATAGAGAATTTCGAAAAAAGAAATTCTACAGGTAATGCAGGTTGGCGGGGCCCCAACA

>NZ_CP044106|2|2|286516-286597|CRISPRCasFinder
AATGCAAGTTGGCGGGGCCCCAACA	TAGAGAATTTCGAAAAAAGAAATTCTACAGGT
AATGCAGGTTGGCGGGGCCCCAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000037087.1\|290628_291846_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|224214
NZ_CP044106.1\|WP_078065149.1\|293219_294476_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_CP044106.1\|WP_000999708.1\|285264_286251_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP044106.1\|WP_001790679.1\|281181_281274_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_025174552.1\|284418_284832_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_001017131.1\|288853_289897_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP044106.1\|WP_000180460.1\|293016_293217_+\|DUF1128-family-protein	unknown	unknown	gnl\|CDD\|227177
NZ_CP044106.1\|WP_000428172.1\|292123_292399_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000544973.1\|283462_284194_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP044106.1\|WP_001790257.1\|284279_284390_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000636142.1\|286779_287538_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP044106.1\|WP_000548782.1\|278496_279027_+\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP044106.1\|WP_001110179.1\|287754_288141_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000153526.1\|289886_290516_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP044106.1\|WP_000140176.1\|279273_280344_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP044106.1\|WP_000613738.1\|280410_280965_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834
NZ_CP044106.1\|WP_000949467.1\|281355_281856_-\|H-type-ferritin-FtnA	unknown	unknown	gnl\|CDD\|224445
NZ_CP044106.1\|WP_000228666.1\|292405_292870_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
NZ_CP044106.1\|WP_001250333.1\|282147_283461_+\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP044106.1\|WP_000149064.1\|288155_288857_+\|cell-wall-active-antibiotics-response-protein	unknown	unknown	gnl\|CDD\|227100

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_078065149.1\|293219_294476_+\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_CP044106.1\|WP_000999708.1\|285264_286251_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	1.82639e-75
NZ_CP044106.1\|WP_000544973.1\|283462_284194_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.79354e-120
NZ_CP044106.1\|WP_000180460.1\|293016_293217_+\|DUF1128-family-protein	gnl\|CDD\|227177	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown].	9.24488e-25
NZ_CP044106.1\|WP_001017131.1\|288853_289897_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.78722e-72
NZ_CP044106.1\|WP_000153526.1\|289886_290516_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.44874e-79
NZ_CP044106.1\|WP_000037087.1\|290628_291846_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	7.61989e-85
NZ_CP044106.1\|WP_000636142.1\|286779_287538_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.9498e-126
NZ_CP044106.1\|WP_000548782.1\|278496_279027_+\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	1.50924e-11
NZ_CP044106.1\|WP_000613738.1\|280410_280965_-\|3'-5'-exonuclease	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	4.39188e-75
NZ_CP044106.1\|WP_000140176.1\|279273_280344_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP044106.1\|WP_000149064.1\|288155_288857_+\|cell-wall-active-antibiotics-response-protein	gnl\|CDD\|227100	COG4758, COG4758, Predicted membrane protein [Function unknown].	9.42019e-79
NZ_CP044106.1\|WP_000949467.1\|281355_281856_-\|H-type-ferritin-FtnA	gnl\|CDD\|224445	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism].	4.6035e-74
NZ_CP044106.1\|WP_000228666.1\|292405_292870_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	3.39151e-65
NZ_CP044106.1\|WP_001250333.1\|282147_283461_+\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	2.56502e-98

>NZ_CP044106.1|WP_000999708.1|285264_286251_-|aromatic-acid-exporter-family-protein
MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYDRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKAHEISGENQIKSHILYEVLMIYRLLDSRYA
>NZ_CP044106.1|WP_025174552.1|284418_284832_+|hypothetical-protein
MKPTKVILRDASYVHSKTSITFILKDVVIEEDNKIYYFDTSATFEDQEIKFEFALFDSDMDNLKHMEYDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDSGLRHSNMATESGISLRINVTKSDFNKFINELASLH
>NZ_CP044106.1|WP_001790257.1|284279_284390_+|hypothetical-protein
MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT
>NZ_CP044106.1|WP_000544973.1|283462_284194_+|type-1-glutamine-amidotransferase
MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHNFGTLGHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEKQAKQVLIDRANRQKKSR
>NZ_CP044106.1|WP_001250333.1|282147_283461_+|Mur-ligase-family-protein
MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLAEQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKTKIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKLLLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQIGHYHCQCGFKREQAKYEISSFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYTVLRELGLNEQAIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEKVYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPIIVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS
>NZ_CP044106.1|WP_000949467.1|281355_281856_-|H-type-ferritin-FtnA
MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFIQQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSEIARQDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGARTFDEE
>NZ_CP044106.1|WP_001790679.1|281181_281274_+|hypothetical-protein
MTKNTIISLENEKTQINDSENESSDLRKAK
>NZ_CP044106.1|WP_000613738.1|280410_280965_-|3'-5'-exonuclease
MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNPQDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQNIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITFRLLKNYENLTYVTNIYGKNLKDKG
>NZ_CP044106.1|WP_000140176.1|279273_280344_+|DNA-polymerase-IV
MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPMSLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKPDGMTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFGKRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERLNKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRLIGVTVGNLEQSTYKNMTIYDFI
>NZ_CP044106.1|WP_000548782.1|278496_279027_+|DUF3267-domain-containing-protein
MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADAYFNKWQFSIIMLSPLILLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
>NZ_CP044106.1|WP_000636142.1|286779_287538_+|type-I-methionyl-aminopeptidase
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
>NZ_CP044106.1|WP_001110179.1|287754_288141_+|hypothetical-protein
MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITKKEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIETQIQQTSTEKIATEKTSYLINYMNAVA
>NZ_CP044106.1|WP_000149064.1|288155_288857_+|cell-wall-active-antibiotics-response-protein
MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
>NZ_CP044106.1|WP_001017131.1|288853_289897_+|sensor-histidine-kinase
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD
>NZ_CP044106.1|WP_000153526.1|289886_290516_+|response-regulator-transcription-factor
MTIKVLFVDDHEMVRIGISSYLSTQRDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
>NZ_CP044106.1|WP_000037087.1|290628_291846_-|YihY/virulence-factor-BrkB-family-protein
MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKEDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNENTRYEYAEDTNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
>NZ_CP044106.1|WP_000428172.1|292123_292399_-|hypothetical-protein
MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTRKPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR
>NZ_CP044106.1|WP_000228666.1|292405_292870_-|low-molecular-weight-phosphotyrosine-protein-phosphatase
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
>NZ_CP044106.1|WP_000180460.1|293016_293217_+|DUF1128-family-protein
MTNEEKVLAIREKLNIVNQGLLDPEKYKNANEEELTDIYDFVQSRERLSPSEVTAIADALGQLRHD
>NZ_CP044106.1|WP_078065149.1|293219_294476_+|aminopeptidase
MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHEIKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIEGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP044106_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_3

481047-481126

Orphan

Consensus_repeat	Method
TGTAGAATTTCTTTTCGAAATTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_3

>merge|NZ_CP044106|3|481047-481126|CRISPRCasFinder
TGTAGAATTTCTTTTCGAAATTCTCTATGTTGGGTCCCACCCCAACTTGCATTGTTTGTAGAATTTCTTTTCGAAATTCT

>NZ_CP044106|3|3|481047-481126|CRISPRCasFinder
TGTAGAATTTCTTTTCGAAATTCT	CTATGTTGGGTCCCACCCCAACTTGCATTGTT
TGTAGAATTTCTTTTCGAAATTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000040069.1\|473232_474435_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP044106.1\|WP_000136257.1\|471580_472075_+\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP044106.1\|WP_000471573.1\|487461_488319_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP044106.1\|WP_000626083.1\|481428_482370_+\|pApA-hydrolase-Pde2	unknown	unknown	gnl\|CDD\|223691
NZ_CP044106.1\|WP_000634175.1\|474680_475181_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP044106.1\|WP_000226897.1\|482390_485588_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|223660
NZ_CP044106.1\|WP_000689998.1\|475321_476440_+\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
NZ_CP044106.1\|WP_000818529.1\|492625_493987_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP044106.1\|WP_000840587.1\|472197_473145_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|223897
NZ_CP044106.1\|WP_000277602.1\|479062_479476_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP044106.1\|WP_000777188.1\|477985_478675_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|234811
NZ_CP044106.1\|WP_000123175.1\|495504_496773_+\|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl\|CDD\|180792
NZ_CP044106.1\|WP_000883646.1\|488318_489263_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP044106.1\|WP_001824175.1\|476563_476677_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000829167.1\|494334_495456_+\|citrate-synthase	unknown	unknown	gnl\|CDD\|184468
NZ_CP044106.1\|WP_000161673.1\|476755_477811_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_CP044106.1\|WP_000717561.1\|489531_490500_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_CP044106.1\|WP_000058390.1\|486037_487267_+\|NAD-dependent-malic-enzyme-4	unknown	unknown	gnl\|CDD\|235976
NZ_CP044106.1\|WP_001232650.1\|490521_492279_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235784
NZ_CP044106.1\|WP_000160435.1\|479680_480979_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|226594

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000040069.1\|473232_474435_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP044106.1\|WP_000136257.1\|471580_472075_+\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	5.93419e-100
NZ_CP044106.1\|WP_000471573.1\|487461_488319_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	0
NZ_CP044106.1\|WP_000626083.1\|481428_482370_+\|pApA-hydrolase-Pde2	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	3.24199e-98
NZ_CP044106.1\|WP_000634175.1\|474680_475181_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.27306e-36
NZ_CP044106.1\|WP_000226897.1\|482390_485588_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|223660	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair].	0
NZ_CP044106.1\|WP_000689998.1\|475321_476440_+\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_CP044106.1\|WP_000840587.1\|472197_473145_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|223897	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair].	2.04137e-56
NZ_CP044106.1\|WP_000277602.1\|479062_479476_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	6.00154e-19
NZ_CP044106.1\|WP_000777188.1\|477985_478675_+\|metal-dependent-hydrolase	gnl\|CDD\|234811	PRK00685, PRK00685, metal-dependent hydrolase; Provisional.	3.09103e-133
NZ_CP044106.1\|WP_000123175.1\|495504_496773_+\|NADP-dependent-isocitrate-dehydrogenase	gnl\|CDD\|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NZ_CP044106.1\|WP_000883646.1\|488318_489263_+\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP044106.1\|WP_000818529.1\|492625_493987_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0
NZ_CP044106.1\|WP_000829167.1\|494334_495456_+\|citrate-synthase	gnl\|CDD\|184468	PRK14035, PRK14035, citrate synthase; Provisional.	0
NZ_CP044106.1\|WP_000161673.1\|476755_477811_-\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	6.97695e-126
NZ_CP044106.1\|WP_000717561.1\|489531_490500_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_CP044106.1\|WP_000058390.1\|486037_487267_+\|NAD-dependent-malic-enzyme-4	gnl\|CDD\|235976	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed.	0
NZ_CP044106.1\|WP_001232650.1\|490521_492279_+\|pyruvate-kinase	gnl\|CDD\|235784	PRK06354, PRK06354, pyruvate kinase; Provisional.	0
NZ_CP044106.1\|WP_000160435.1\|479680_480979_+\|CBS-domain-containing-protein	gnl\|CDD\|226594	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription].	0

>NZ_CP044106.1|WP_000160435.1|479680_480979_+|CBS-domain-containing-protein
MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRIEKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFNQKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSREMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQDVLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEETIQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVASALVICQMFDEV
>NZ_CP044106.1|WP_000277602.1|479062_479476_-|universal-stress-protein
MYKNILLGVDTQLKNEKALKEVSKLAGEGTVVTVLNAISEQDAQASIKAGVHLNKLTEERSKRLEKTRKALEDYGIDYDQIIVRGNAKEELLKHANSGKYEIVVLSNRKAEDKKKFVLGSVSHKVAKRATIPVLIVK
>NZ_CP044106.1|WP_000777188.1|477985_478675_+|metal-dependent-hydrolase
MKLSFHGQSTIYLEGNNKKVIVDPFISNNPKCDLNIETVQVDYIVLTHGHFDHFGDVVELAKKTGATVIGSAEMADYLSSYHGVENVHGMNIGGKANFDFGSVKFVQAFHSSSFTHENGIPVYLGMPMGIVFEVEGKTIYHTGDTGLFSDMSLIAKRHPVDVCFVPIGDNFTMGIDDASYAINEFIKPKISVPIHYDTFPLIEQDPQQFKDAVNVGDVQILKPGESVQF
>NZ_CP044106.1|WP_000161673.1|476755_477811_-|aminopeptidase-P-family-protein
MTKISKIIDELNNQQADAAWITTPLNVYYFTGYRSEPHERLFALLIKKDGKQVLFCPKMEVEEVKASPFTGEIVGYLDTENPFSLYPQTINKLLIESEHLTVARQKQLTSGFNVNSFGDVDLTIKQLRNIKSEDEISKIRKAAELADKCIEIGVSYLKEGVTEREVVNHIEQTIKQYGVNEMSFDTMVLFGDHAASPHGTPGDRRLKSNEYVLFDLGVIYEHYCSDMTRTIKFGEPNKEAQEIYNIVLEAETSAIQAIKPGIPLKDIDHIARNIISEKGYGEYFPHRLGHGLGLQEHEYQDVSSTNSNLLEAGMVITIEPGIYVPGVAGVRIEDDILVTNEGYEVLTHYEK
>NZ_CP044106.1|WP_001824175.1|476563_476677_+|hypothetical-protein
MNDIDLIHYMLLMNVPAYVFLACLLYIAVRLGQKFMF
>NZ_CP044106.1|WP_000689998.1|475321_476440_+|alanine-dehydrogenase
MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAEQAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL
>NZ_CP044106.1|WP_000634175.1|474680_475181_-|universal-stress-protein
MITYKNILIAVDGSHEAEWAFNRAVGVAKRNDAKLTIVNVIDSRTYSSYEVYDAQFTEKSKHFAEELLNGYKEVATNAGVKDVETRLEFGSPKSIIPKKLAHEINADLIMSGTSGLNAVERFIVGSVSESIVRHAPCDVLVVRTEELPADFQPQVATTQLREKYQN
>NZ_CP044106.1|WP_000040069.1|473232_474435_+|acetate-kinase
MSKLILAINAGSSSLKFQLIRMPEEELVTKGLVERIGLKDSIFTIEVNGEKVKTVQDIKDHVEAVDIMLDAFKAHNIINDINDIDGTGHRVVHGGEKFPESVAITDEVEKEIEELSELAPLHNPANLMGIRAFRKLLPNIPHVAIFDTAFHQTMPEKAYLYSLPYHYYKDYGIRKYGFHGTSHKFVSQRAAEMLDKPIEDLRIISCHIGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVLEILNKESGLLGLSGTSSDLRDLSEEAESGKARSQMALDVFASKIHKYIGSYAARMHGVDVIVFTAGIGENSVEIRAKVLEGLEFMGVYWDPKKNENLLRGKEGFINYPHSPVKVVVIPTDEESMIARDVMTFGGLK
>NZ_CP044106.1|WP_000840587.1|472197_473145_+|class-I-SAM-dependent-methyltransferase
MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTNERGLLEQSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQEELHIVDIASGVGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFLEIPFDVYPQDAIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEKGHSYSHYLLIEQAINALKDAGYAFLVVPSNIFTGEHVKQLEKYIATETEMQAFLNLPPTLFKNEKARKSILILQKKKSGETKPVEVLLANIPDFKNPSQFQGFMTELNQWMDTNRPKK
>NZ_CP044106.1|WP_000136257.1|471580_472075_+|thiol-peroxidase
MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSEASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
>NZ_CP044106.1|WP_000626083.1|481428_482370_+|pApA-hydrolase-Pde2
MISTLNEIMKCIEDNDTIIIHRHVRPDPDAYGSQLGLKYYIQQKFPQKQVFAVGEAESSLSFIGELDNIDDKTYQDALVIVCDTANAPRIDDERYSTGSKLIKIDHHPAVDQYGDINLVNTNASSTSEIIYDLISHFNDEAIVNKDIASVLYLGIVGDTGRFLFNNTSEHTMEIAGKLIGHDIDHNVLLNKMMEKDPKMLPFQGYVLQHFELMDDGFCQVKITEDVLEQFGIQPNEASQFVNTIADIKGLKIWVFAVDEGSEIRCRLRSKGQLIINDIAQDFGGGGHPNASGVSVNSWDEFEQLATALRTKLN
>NZ_CP044106.1|WP_000226897.1|482390_485588_+|DNA-polymerase-III-subunit-alpha
MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVDALAITDTNVLYGFPKFYDACIANNIKPIFGMTIYVTNGLNTIETVVLAKDNNGLKDLYQLSSEIKMNALEHVSFELLKRFSNNMIIIFKKVGDQHRDIVQVFETHNDTYMDHLSISIQGIKHVWIQNVCYQTRQDADTISALAAIRDNTKLDLIHDQEDFGAHFLTEKEIKQLDINQEYLTQVDVIAQKCNAELKYHQSLLPQYQTPNDESAKKYLWRVLVTQLKKLELNYDVYLERLKYEYKVITNMGFEDYFLIVSDLIHYAKTNDVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLFERFLNPERVTMPDIDIDFEDTRRERVIQYVQEKYGELHVSGIVTFGHLLARAVARDVGRIMGFDEVTLNEISSLIPHKLGITLDEAYQIDDFKKFVHRNHRHERWFSICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTKGDTGLLTQWTMTEAERIGLLKIDFLGLRNLSIIHQILIQVKKDLGINIDIEKIPFDDQKVFELLSQGDTTGIFQLESDGVRSVLKKLKPEHFEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQYLHPHLEPILKNTYGVIIYQEQIMQIASTFANFSYGEADILRRAMSKKNRAVLESERQHFIEGAKENGYHEDISKQIFDLILKFADYGFPRAHAVSYSKIAYIMSFLKVHYPNYFYANILSNVIGSEKKTAQMIEEAKKQGITILPPNINESHWFYKPSHEGIYLSIGTIKGVGYQSVKVIVDERYQNGKFKDFFDFARRIPKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGDLNIEQDGFLFDILTPKQMYEDKEELPDALISQYEKEYLGFYVSQHPVDKMFVAKQYLTIFKLSNAQNNKPILVQFDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQFKKYEELLSHNDLFIVSGKFDHRKQQRQLIINEIQTLATFEEQKLAFAKQIIIRNKSHIDTFEEMIKATKENANDVVLSFYDETIKQMTTLGYINQKDSMFNNFIQSFNPSDIRLI
>NZ_CP044106.1|WP_000058390.1|486037_487267_+|NAD-dependent-malic-enzyme-4
MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQHGTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTNKDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLAFPGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIEVNPQDVYDKTMKLTDLQ
>NZ_CP044106.1|WP_000471573.1|487461_488319_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MFKDFFNRTKKKKYLTVQDSKNNDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHHIPLTAYKRIEAISDEGSFTEFDKGMTSANPLDFPSYIEKIEKDQQKTGLKEAVVTGTAQLDGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASGGARMQEGIISLMQMGKTSVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRVIEQTINEKLPDDFQTAEFLLEHGQLDKVVHRNDMRQTLSEILKIHQEVTK
>NZ_CP044106.1|WP_000883646.1|488318_489263_+|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAEERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDIEQQALAIKSAFVEQLDSLESLSRDEIANDRFEKFRNIGSYIE
>NZ_CP044106.1|WP_000717561.1|489531_490500_+|6-phosphofructokinase
MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDTIQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQTIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLALWAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYINVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDEIFDGKDHKFDYSLYELANKLSI
>NZ_CP044106.1|WP_001232650.1|490521_492279_+|pyruvate-kinase
MRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIAEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKIHLVGDEIANGQGIGRGSVVGTTLVAETVKDLEGKDLSDKVIVTNSIDETFVPYVEKALGLITEENGITSPSAIVGLEKGIPTVVGVEKAVKNISNNMLVTIDAAQGKIFEGYANVL
>NZ_CP044106.1|WP_000818529.1|492625_493987_-|amino-acid-permease
MAEKLQRELSNRHIQLIAIGGAIGTGLFLGAGQTIALTGPSILLTYIIIGFMLFMFMRGLGEIIIQNTEFKSFADVTNTYIGPFAGFVTGWTYWFCWIITGMAEVTAVAKYVSFWFPEIPNWISALFCVLLLMSFNLLSARLFGELEFWFSIIKIATIIGLIVVGFVMILFAFKTQFGHASFTNLYEHGIFAKGASGFFMSFQMALFSFVGIEMIGVTAGETKDPVKTIPKAINSVPIRILIFYVGALAVIMSIIPWQQVDPDNSPFVKLFALIGIPFAAGLINFVVLTAAASSCNSGIFSNSRMLFGLSSQQQAPPNFTKTNKYGVPHVAIFASSALLLVAALLNYIFPDATKVFTYVTTISTVLFLVVWGLIIIAYINYSRKNPDLHKNATYKLLGGKYMGYLIFVFFIFVFGLLFINVDTRRAIYFIPIWFILLGFMYLRYKRIAAKSNK
>NZ_CP044106.1|WP_000829167.1|494334_495456_+|citrate-synthase
MAELQRGLEGVIAAETKISSIIESQLTYAGYDIDDLAENAQFEEVIFLLWNYRLPNEEELAHLKGKLNQYMTLNPRVYTHFEEYVTDHVHPMTALRTSLSYIAHFDPDAENESDENRYERAMRIQAKVASLVTAFARVRQDKEPLKPNPDLSYAANFLYMLRGELPTDIEVEAFNKALILHADHELNASAFTARCAVSSLSDMYSGIVAAVGSLKGPLHGGANEQVMTMLSEIGSIENVDAYLDEKFANKDKVMGFGHRVYKDGDPRAKYLREMSRQITKDAGREELFEMSVKMEKRMAEEKGLIPNVDFYSASVYHCMEIPHDLFTPIFAVSRSAGWIAHILEQYKDNRIMRPRAKYIGETNRKYIPLEERK
>NZ_CP044106.1|WP_000123175.1|495504_496773_+|NADP-dependent-isocitrate-dehydrogenase
MTAEKITQGTEGLNVPNEPIIPFIIGDGIGPDIWKAASRVIDAAVEKAYNGEKRIEWKEVLAGQKAFDTTGEWLPQETLDTIKEYLIAVKGPLTTPIGGGIRSLNVALRQELDLFTCLRPVRWFKGVPSPVKRPQDVDMVIFRENTEDIYAGIEFKEGTTEVKKVIDFLQNEMGATNIRFPETSGIGIKPVSKEGTERLVRAAIQYAIDNNRKSVTLVHKGNIMKFTEGSFKQWGYDLALTEFGDQVFTWQQYDEIVENEGRDAANAAQEKAEKEGKIIIKDSIADIFLQQILTRPAEHDVVATMNLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATHGTAPKYAGLNKVNPSSVILSSVLMLEHLGWQEAADKITDSIEDTIASKVVTYDFARLMDGAEEVSTSAFADELIKNLK

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Crispr_ID: NZ_CP044106_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_4

835987-836066

Orphan

Consensus_repeat	Method
CAGCTTACAATAAAGTGCAAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_4

>merge|NZ_CP044106|4|835987-836066|CRISPRCasFinder
CAGCTTACAATAAAGTGCAAGTTGGCGGGTCCCCAACATAGTAGCTGCGGAAAGCCAGCTTACAATAATGTGCAAGTTGG

>NZ_CP044106|4|4|835987-836066|CRISPRCasFinder
CAGCTTACAATAAAGTGCAAGTTGG	CGGGTCCCCAACATAGTAGCTGCGGAAAGC
CAGCTTACAATAATGTGCAAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000159902.1\|829450_829984_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|237269
NZ_CP044106.1\|WP_001115459.1\|841696_842965_+\|dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP044106.1\|WP_000160908.1\|833740_834811_+\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	unknown	unknown	gnl\|CDD\|171505
NZ_CP044106.1\|WP_001788788.1\|850267_850897_-\|5-bromo-4-chloroindolyl-phosphate-hydrolysis-protein	unknown	unknown	gnl\|CDD\|227252
NZ_CP044106.1\|WP_000180678.1\|838884_841683_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP044106.1\|WP_000902174.1\|844382_844586_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000175746.1\|828023_828503_+\|dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NZ_CP044106.1\|WP_000166052.1\|828517_829357_+\|fatty-acid-kinase-FakB2	unknown	unknown	gnl\|CDD\|273257
NZ_CP044106.1\|WP_000084773.1\|834827_835442_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP044106.1\|WP_000166795.1\|837240_838596_+\|sensor-histidine-kinase-ArlS	unknown	unknown	gnl\|CDD\|223715
NZ_CP044106.1\|WP_001039275.1\|847682_849026_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|224039
NZ_CP044106.1\|WP_000801007.1\|830916_831138_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226885
NZ_CP044106.1\|WP_000334509.1\|843544_844354_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319934
NZ_CP044106.1\|WP_000473654.1\|830416_830917_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225101
NZ_CP044106.1\|WP_001185421.1\|844766_845558_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP044106.1\|WP_000913315.1\|829976_830405_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP044106.1\|WP_001283670.1\|845571_847458_+\|nitric-oxide-reductase-activation-protein-NorD	unknown	unknown	gnl\|CDD\|226921
NZ_CP044106.1\|WP_000620194.1\|833219_833729_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP044106.1\|WP_000342123.1\|831329_832820_+\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP044106.1\|WP_000138424.1\|849099_850236_-\|toxic-anion-resistance-protein	unknown	unknown	gnl\|CDD\|377557

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000159902.1\|829450_829984_+\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|237269	PRK13014, PRK13014, methionine sulfoxide reductase A; Provisional.	4.15064e-107
NZ_CP044106.1\|WP_001115459.1\|841696_842965_+\|dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	0
NZ_CP044106.1\|WP_000160908.1\|833740_834811_+\|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase	gnl\|CDD\|171505	PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed.	3.82367e-132
NZ_CP044106.1\|WP_001788788.1\|850267_850897_-\|5-bromo-4-chloroindolyl-phosphate-hydrolysis-protein	gnl\|CDD\|227252	COG4915, XpaC, 5-bromo-4-chloroindolyl phosphate hydrolysis protein [General function prediction only].	2.2708e-95
NZ_CP044106.1\|WP_000180678.1\|838884_841683_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP044106.1\|WP_000175746.1\|828023_828503_+\|dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	8.71869e-81
NZ_CP044106.1\|WP_000166052.1\|828517_829357_+\|fatty-acid-kinase-FakB2	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	8.59745e-119
NZ_CP044106.1\|WP_000084773.1\|834827_835442_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	6.60547e-49
NZ_CP044106.1\|WP_000166795.1\|837240_838596_+\|sensor-histidine-kinase-ArlS	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.27236e-48
NZ_CP044106.1\|WP_001039275.1\|847682_849026_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|224039	COG1114, BrnQ, Branched-chain amino acid permeases [Amino acid transport and metabolism].	1.47543e-160
NZ_CP044106.1\|WP_000801007.1\|830916_831138_+\|hypothetical-protein	gnl\|CDD\|226885	COG4479, COG4479, Uncharacterized protein conserved in bacteria [Function unknown].	1.53726e-28
NZ_CP044106.1\|WP_000334509.1\|843544_844354_+\|hypothetical-protein	gnl\|CDD\|319934	cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	8.74417e-08
NZ_CP044106.1\|WP_000473654.1\|830416_830917_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|225101	COG2190, NagE, Phosphotransferase system IIA components [Carbohydrate transport and metabolism].	9.03019e-68
NZ_CP044106.1\|WP_001185421.1\|844766_845558_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.42262e-45
NZ_CP044106.1\|WP_000913315.1\|829976_830405_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	9.76591e-81
NZ_CP044106.1\|WP_001283670.1\|845571_847458_+\|nitric-oxide-reductase-activation-protein-NorD	gnl\|CDD\|226921	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism].	0
NZ_CP044106.1\|WP_000620194.1\|833219_833729_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.78214e-09
NZ_CP044106.1\|WP_000342123.1\|831329_832820_+\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	7.13135e-124
NZ_CP044106.1\|WP_000138424.1\|849099_850236_-\|toxic-anion-resistance-protein	gnl\|CDD\|377557	pfam05816, TelA, Toxic anion resistance protein (TelA). This family consists of several prokaryotic TelA like proteins. TelA and KlA are associated with tellurite resistance and plasmid fertility inhibition.	2.13715e-131

>NZ_CP044106.1|WP_000084773.1|834827_835442_+|phosphatase-PAP2-family-protein
MSQWKRISLLIVFTLVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQGNSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN
>NZ_CP044106.1|WP_000160908.1|833740_834811_+|undecaprenyldiphospho-muramoylpentapeptide-beta-N-acetylglucosaminyltransferase
MTKIAFTGGGTVGHVSVNLSLIPTALSQGYEALYIGSKNGIEREMIESQLPEIKYYPISSGKLRRYISLENAKDVFKVLKGILDARKVLKKEKPDLLFSKGGFVSVPVVIAAKSLNIPTIIHESDLTPGLANKIALKFAKKIYTTFEETLNYLPKEKADFIGATIREDLKNGNAHNGYQLTGFNENKKVLLVMGGSLGSKKLNSIIRENLDALLQQYQVIHLTGKGLKDDQVKKSGYIQYEFVKEDLTDLLAITDTVISRAGSNAIYEFLTLRIPMLLVPLGLDQSRGDQIDNANHFADKGYAKAIDEEQLTAQILLQELNEMEQERTRIINNMKSYEQSYTKEALFDKMIKDALN
>NZ_CP044106.1|WP_000620194.1|833219_833729_+|GNAT-family-N-acetyltransferase
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
>NZ_CP044106.1|WP_000342123.1|831329_832820_+|S41-family-peptidase
MDDKQHKSSSDDERAEIATSNQDQQTNSSKRVHLKRWQFISILIGTILITAVITVVAYIFINQKISGLNKTDQANLNKIENVYKILNSDYFKKQNSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGDFVGIGAEMQKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVRGKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGIITINKFQNDTSGELKDAVLKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALKEAKDMDISILVNEGSASASEVFTGALKDYHKAKVYGSKTFGKGVVQTTREFKDGSLLKYTEMKWLTPDGHYIHGKGIKPDVTIDTPKYQSLNVIPNTKTFKVGDDDKNIKTIKIGLSALGYKVDNESTQFDQALENQVKAFQQANKLEVTGEFNKETNNKFTELLVEKANKHDDVLDKLINILK
>NZ_CP044106.1|WP_000801007.1|830916_831138_+|hypothetical-protein
MKNYSFYQFVMTVRGRHDDKGRLAEEIFDDLAFPKHDDDFNILSDYIETHGDFTLPMSVFDDLYEEYTEWLKF
>NZ_CP044106.1|WP_000473654.1|830416_830917_+|PTS-glucose-transporter-subunit-IIA
MFKKLFGKGKEVQKDIAIYAPLTGEYVKIEDIPDPVFAQKMMGEGFGINPTEGEVVSPIAGRVDNVFPTKHAIGLKADNGLELLVHIGLDTVQLDGEGFEVLVSSGDEVNVGDPLVRFNLEYINNNAKSVISPIIITNTDQAASINIYDENAVIKGETKVIDVTMN
>NZ_CP044106.1|WP_000913315.1|829976_830405_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MLKKDKSELTDIEYIVTQENGTEPPFMNEYWNHFAKGIYVDKISGKPLFTSEEKFHSECGWPSFSKALDDDEIIELVDKSFGMLRTEVRSEESNSHLGHVFNDGPKESGGLRYCINSAAIQFIPYEKLEELGYGDLISHFDK
>NZ_CP044106.1|WP_000159902.1|829450_829984_+|peptide-methionine-(S)-S-oxide-reductase-MsrA
MTKEYATLAGGCFWCMVKPFTSYPGIKSVVSGYSGGHVDNPTYEQVCTNQTGHVEAVQITFDPEVTSFENILDIYFKTFDPTDDQGQFFDRGESYQPVIFYHDEHQKKAAEFKKQQLNEQGIFKKPVITPIKPYKNFYPAEDYHQDYYKKNPVHYYQYQRGSGRKAFIESHWGNQNA
>NZ_CP044106.1|WP_000166052.1|828517_829357_+|fatty-acid-kinase-FakB2
MTKQIIVTDSTSDLSKEYLEANNIHVIPLSLTIEGASYVDQVDITSEEFINHIENDEDVKTSQPAIGEFISAYEELGKDGAEIISIHLSSGLSGTFNTAYQASQMVDANVTVIDSKSISFGLGYQIQHLVELVKEGVSTSEIVNKLNHLRENIKLFVVIGQLNQLIKGGRISKTKGLIGNLMKIKPIGTLDDGRLELVHNARTQNSSIQYLKKEIAEFIGDHEIKSVGVAHANVIEYVDKLKKVFNEAFHVNNYDINVTTPVISAHTGQGAIGLVVLKK
>NZ_CP044106.1|WP_000175746.1|828023_828503_+|dihydrofolate-reductase
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
>NZ_CP044106.1|WP_000166795.1|837240_838596_+|sensor-histidine-kinase-ArlS
MTKRKLRNNWIIVTTMITFVTIFLFCLIIIFFLKDTLHNSELDDAERSSSDINNLFHSKPVKDISALDLNASLGNFQEIIIYDEHNNKLFETSNDNTVRVEPGYEHRYFDRVIKKRYKGIDYLIIKEPITTQDFKGYSLLIHSLENYDNIVKSLYIIALAFGVIATIITATISYVFSTQITKPLVSLSNKMIEIRRDGFQNKLQLNTNYEEIDNLANTFNEMMSQIEESFNQQRQFVEDASHELRTPLQIIQGHLNLIQRWGKKDPAVLEESLNISIEEMNRIIKLVEELLELTKGDVNDISSEAQTVHINDEIRSRIHSLKQLHPDYQFDTDLTSKNLEIKMKPHQFEQLFLIFIDNAIKYDVKNKKIKVKTRLKNKQKIIEITDNGIGIPEEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQLNGGSIKIKSEINKGTTFKIIF
>NZ_CP044106.1|WP_000180678.1|838884_841683_+|2-oxoglutarate-dehydrogenase-E1-component
MTNERKEVSEAPVNFGANLGLMLDLYDDFLQDPSSVPEDLQVLFSTIKNDDSIVPALKSTSSQNSDGTIKRVMRLIDNIRQYGHLKADIYPVNPPKRKHVPKLEIEDFDLDQQTLEGISAGIVSDHFADIYDNAYEAILRMEKRYKGPIAFEYTHINNNTERGWLKRRIETPYKVTLNNNEKRALFKQLAYVEGFEKYLHKNFVGAKRFSIEGVDALVPMLQRTITIAAKEGIKNIQIGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLQLTAGWTGDVKYHLGGIKTTDSYGTMQRIALANNPSHLEIVAPVVEGRTRAAQDDTQRAGAPTTDHHKAMPIIIHGDAAYPGQGINFETMNLGNLKGYSTGGSLHIITNNRIGFTTEPIDARSTTYSTDVAKGYDVPIFHVNADDVEATIEAIDIAMEFRKEFHKDVVIDLVGYRRFGHNEMDEPSITNPVPYQNIRKHDSVEYVFGKKLVNEGVISEDEMNSFIEQVQKELRQAHDKINKADKMDNPDMEKPADLALPLQADEQSFTFDHLKEINDALLTYPDGFNILKKLNKVLEKRHEPFNKEDGLVDWAQAEQLAFATILQDGTPIRLTGQDSERGTFSHRHAVLHDEQTGETYTPLHHVPDQKATFDIHNSPLSEAAVVGFEYGYNVENKKSFNIWEAQYGDFANMSQMIFDNFLFSSRSKWGERSGLTLFLPHAYEGQGPEHSSARLERFLQLAAENNCTVVNLSSSSNYFHLLRAQAASLDSEQMRPLVVMSPKSLLRNKTVAKPIDEFTSGGFEPILTESYQADKVTKVILATGKMFIDLKEALAKNPDESVLLVAIERLYPFPEEEIEALLAQLPNLEEVSWVQEEPKNQGAWLYVYPYVKVLVADKYDLSYHGRIQRAAPAEGDGEIHKLVQNKIIENALKNN
>NZ_CP044106.1|WP_001115459.1|841696_842965_+|dihydrolipoyllysine-residue-succinyltransferase
MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLTEQLASEGDTVEVGQAIAVIGEGSGNASKENSNDNTPQQNEETNNKKEETTNKSADKAEVNQTTDDNQQRVNATPSARRYARENGVNLAEVSPKTNDLVRKEDIDKKQQAPASTQTTQQAPAKEEKKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKDQFMKDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFVRDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAAILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLLES
>NZ_CP044106.1|WP_000334509.1|843544_844354_+|hypothetical-protein
MCGLRSITLGTTNIEQTKHFMVDILGLNCEELLENSIRFGDADISPGTRLQFIQVPSEQLEESHFVGIGLRTPTDSGLEEYAEILSSKEIPFTTTKELNGNKYFSFEDNNGHIFSIYSNENNYGVGLGMPSFESAVNPLHQVQGLGPVILKVNHVDITGQILTNIFGLEVFAEYQPFDNADYHVQVFKIGTGGLGGEIHLMPVETEMTMPEYGAVDQVEFETKDADFFNQAKSRLDEVEIPYQTLEQDDIESIRITENSGLSFIFTLQK
>NZ_CP044106.1|WP_000902174.1|844382_844586_+|hypothetical-protein
MLHETWKERTPIKKVEVINTDAKKFTVSDMLTVGKQYDVINETEEYYQIIDNSGLIGGYYKTYFKEV
>NZ_CP044106.1|WP_001185421.1|844766_845558_+|MoxR-family-ATPase
MALKHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDTESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRRQITNPYTGEVIKAVPGFNVIAAINEGYVGTLPMNEALKNRFVVIHVDYIDGDILKNVIKEQSLLQDDKQIEQIIKFNEDLRTMSKQGQISEEAASIRALLDLCDLITVMPVERAIKRTIIDKLEDEREQQAIYNAVELNF
>NZ_CP044106.1|WP_001283670.1|845571_847458_+|nitric-oxide-reductase-activation-protein-NorD
MSDRFIKFNDEQLDAKQVMMLQDLARLLLKNEQTQVKIQKFPYYNPVQNVLITSWFWSHRPSHIEMAGLKTDVMLAAYGYHMMDVQIVNEVVQDKTFKHPKFYQQLFKLLEDMRVLNSIKVERPSTAKLIDLRLDTRISYTESQIKVYRTKTQYTDLLFLYLEHAFLSQDFFDIPSIHSDLDDILVNMFLYLPNFFQNQNSEDNMYLAQRIMYQVDDILKEDMLNEYYYLPKTLYNTLASPEFEDLKRTDASQVDGQDDTSEDDDNQSEKADSKSADSESKGGAYLEMELHEGQNSETLGNDEAREGDATDDMTDMMTKKGKGSNDTLNREEGDAVGQSQAFQLDGVNKNVEIKWQIPEIEPQYVLEYQESKQDVQYEIKDLIQIIKKTIEREQRDARFNLTKGRLQKDLINWFIDDQYKLFYKKQDLSKSFDATFTLLIDASASMHDKMAETKKGVVLFHETLKALNIKHEILSFSEDAFDSDEHAQPNIINEIINYDYSTFEKDGPRIMALEPQDDNRDGVAIRVASERLMRRNQHQRFLIVFSDGEPSAFNYSQDGIIDTYEAVEMSRKFGIEVFNVFLSQDPITEDVEQTIHNIYGQYAIFVEGVAHLPGHLSPLLKKLLLKSL
>NZ_CP044106.1|WP_001039275.1|847682_849026_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MNKNTWVIGFTLFAMFFGAGNLIFPPNLGLDSGQFFWPAILAFVLTGIGLPLLGVIVGALDKEGYIGALNKISPKFSILFLIIIYLTIGPLFAIPRTASTSFEMTITPIIHSNSSIALFIFTIIYFIVVLYICLNPSKLIDRIGSLLTPLLLITILAMIIKGYLDFSGNSAGKGNEALYHSNFSSFAEGFTQGYLTMDAIAAIAFSMIVVNAVKLTGITKTNQIFKQTLTAGLIAAVALIFIYISLGYIGNHMPVSDMTLDQLKSKDRNIGTYLLTTMASTGFGSFGKYLLGIIVALACLTTACGLIVAVSEYFHRIVPKVSYKAFVLVFILMSFIIANQGLNAVISMSIPVLSIVYPVAITVVLLILIAKFIPTKRISQQIPVIIVFILSIFSVISKLGWLKINFIESLPLRAYSLEWFPVAIIATILGYLVGIFVKQDPIKYQQE
>NZ_CP044106.1|WP_000138424.1|849099_850236_-|toxic-anion-resistance-protein
MTENKSFKESHPLDDFISDKELSNTTIQKEKLTIEQQKQVDTISKQINPLDNEGLLAFGSGLQKQMSQFSHQMLDEVQSKDVGPIGDTLSDLMSKLKSVNPNELNTDKPSMLKRIFSRAKSSINEIFSRMQSVSAQVDRITIQLQKHQTHLTRDIELLDTLYDKNKQYFDDLSLHIIAAQQKKLQLENEKLPQLQQQAQQSTNQMDIQQVADMQQFIDRLDKRIYDLQLSRQIALQTAPQIRMIQNVNQALAEKIQSSILTSIPLWKNQMAIALTLMRQRNAVAAQRAVTDTTNDLLTANAEMLKQNAIETATENERGIVDLDTLKRTQRNIIETIEETLIIQQHGREERQLAEKELQQLEQDLKSHLVNIKGPNKQS
>NZ_CP044106.1|WP_001788788.1|850267_850897_-|5-bromo-4-chloroindolyl-phosphate-hydrolysis-protein
MTVRYNISHIFGVLVGIPVAFLTSIFGMIALDVSFLIDMSIGIVGFLMTYLPIQKLTSRKYLNEIGLTRKDYRYIRNQLNHTHQKLRGILKTYVNIRSIKDFRQINDIYQISRSIYTTVRQRPASFYKVEGFFYSHIDNALNLVDAYTRLAKMPKKSINEQQKLEQTRITLDEVKRTLIADLKRLNEDDYERLDIEMELNKLHQKHHQD

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Crispr_ID: NZ_CP044106_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_5

1044493-1044585

Unclear

Consensus_repeat	Method
AGTTATCAATTTATTGATTACTGTTTCTTA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP044106_5

>merge|NZ_CP044106|5|1044493-1044585|CRISPRCasFinder
AGTTATCAATTTATTGATTACTGTTTCTTATGCATGAGCTTTAGCTCAGGCGTTCCGCTTATTAGTTATCAATTTATTGATTACTGTTTCTTA

>NZ_CP044106|5|5|1044493-1044585|CRISPRCasFinder
AGTTATCAATTTATTGATTACTGTTTCTTA	TGCATGAGCTTTAGCTCAGGCGTTCCGCTTATT
AGTTATCAATTTATTGATTACTGTTTCTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000164340.1\|1054065_1054710_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_CP044106.1\|WP_031845105.1\|1045435_1046362_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP044106.1\|WP_000007686.1\|1038359_1039610_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP044106.1\|WP_000181404.1\|1034145_1034496_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP044106.1\|WP_001151491.1\|1048119_1050180_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP044106.1\|WP_000623917.1\|1050369_1052016_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|224378
NZ_CP044106.1\|WP_001548538.1\|1047345_1047918_-\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP044106.1\|WP_000043237.1\|1043322_1044054_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP044106.1\|WP_000517908.1\|1052847_1053036_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP044106.1\|WP_000171418.1\|1052030_1052405_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP044106.1\|WP_000426914.1\|1044169_1044403_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP044106.1\|WP_000262685.1\|1039609_1043176_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP044106.1\|WP_000167269.1\|1044708_1045443_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP044106.1\|WP_000239738.1\|1046354_1047341_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP044106.1\|WP_000531320.1\|1038040_1038373_-\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP044106.1\|WP_000687320.1\|1034598_1035336_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP044106.1\|WP_000268754.1\|1036026_1036302_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP044106.1\|WP_000863474.1\|1036647_1038015_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP044106.1\|WP_001261990.1\|1035335_1035839_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP044106.1\|WP_000547905.1\|1053417_1054059_-\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|224480

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000164340.1\|1054065_1054710_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	4.67332e-114
NZ_CP044106.1\|WP_031845105.1\|1045435_1046362_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.79536e-133
NZ_CP044106.1\|WP_000007686.1\|1038359_1039610_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP044106.1\|WP_000181404.1\|1034145_1034496_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	6.77895e-70
NZ_CP044106.1\|WP_001151491.1\|1048119_1050180_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP044106.1\|WP_000623917.1\|1050369_1052016_-\|DAK2-domain-containing-protein	gnl\|CDD\|224378	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only].	0
NZ_CP044106.1\|WP_001548538.1\|1047345_1047918_-\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	2.37773e-98
NZ_CP044106.1\|WP_000043237.1\|1043322_1044054_-\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	4.78039e-115
NZ_CP044106.1\|WP_000517908.1\|1052847_1053036_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_CP044106.1\|WP_000171418.1\|1052030_1052405_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	4.1554e-37
NZ_CP044106.1\|WP_000426914.1\|1044169_1044403_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	5.23888e-31
NZ_CP044106.1\|WP_000262685.1\|1039609_1043176_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP044106.1\|WP_000167269.1\|1044708_1045443_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	3.68137e-140
NZ_CP044106.1\|WP_000239738.1\|1046354_1047341_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	6.04516e-178
NZ_CP044106.1\|WP_000531320.1\|1038040_1038373_-\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	5.84113e-47
NZ_CP044106.1\|WP_000687320.1\|1034598_1035336_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.74382e-164
NZ_CP044106.1\|WP_000268754.1\|1036026_1036302_-\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	3.01687e-41
NZ_CP044106.1\|WP_000863474.1\|1036647_1038015_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP044106.1\|WP_001261990.1\|1035335_1035839_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	7.15666e-69
NZ_CP044106.1\|WP_000547905.1\|1053417_1054059_-\|thiamine-diphosphokinase	gnl\|CDD\|224480	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism].	1.16343e-81

>NZ_CP044106.1|WP_000426914.1|1044169_1044403_-|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
>NZ_CP044106.1|WP_000043237.1|1043322_1044054_-|ribonuclease-III
MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQIK
>NZ_CP044106.1|WP_000262685.1|1039609_1043176_-|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVTRRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQIIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKTLSHQMKHSDIVVTVHDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGKRHQLDNDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLIELLENISNEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSEQSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELSAVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGVKHILKAKNKELKGIHGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFLKERNLGRATFLPLNVIKSRVVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLGNTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTTMRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLTTQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETHLESIKSSLKRLEDEIERYTKLSKEGKESVTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQSQQTKHQLNDVKEKIAFFNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEATLQVCHQDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKSEYTSDESIDALRKKVKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRKAKETLEQIISEMDQEVTERFKETFHAIQGHFTAVFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLLSGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVITHRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ
>NZ_CP044106.1|WP_000007686.1|1038359_1039610_-|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFATNKENEEVKSLTEEQGQDKLEDTHSEGSTQDVNDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREVIVEKIVEIYHQEDDNSEAMNLEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVMLAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDTAGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVTGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQNEEITTVENDQIVTEEKDDNHGAK
>NZ_CP044106.1|WP_000531320.1|1038040_1038373_-|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
>NZ_CP044106.1|WP_000863474.1|1036647_1038015_-|signal-recognition-particle-protein
MAFEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKGMNLPF
>NZ_CP044106.1|WP_000268754.1|1036026_1036302_-|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
>NZ_CP044106.1|WP_001261990.1|1035335_1035839_-|ribosome-maturation-factor-RimM
MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNNDLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEYYYSDIIGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIITPMEGLLD
>NZ_CP044106.1|WP_000687320.1|1034598_1035336_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFAGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQTRVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNADKQILERYKIGLKKG
>NZ_CP044106.1|WP_000181404.1|1034145_1034496_-|50S-ribosomal-protein-L19
MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_CP044106.1|WP_000167269.1|1044708_1045443_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP044106.1|WP_031845105.1|1045435_1046362_-|ACP-S-malonyltransferase
MNKIAIIFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDILETMFTDEDGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLEDVKGWNEND
>NZ_CP044106.1|WP_000239738.1|1046354_1047341_-|phosphate-acyltransferase-PlsX
MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYKLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQKIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNQDHSLNFVGNIEAKTLMDGDTDVVVTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKLAGAILKKDLAEFAKKMDYSEYGGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE
>NZ_CP044106.1|WP_001548538.1|1047345_1047918_-|transcription-factor-FapR
MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
>NZ_CP044106.1|WP_001151491.1|1048119_1050180_-|ATP-dependent-DNA-helicase-RecG
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQNQENADVQLEPVYRIKEGIKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKSSDEAIEIDYDLDQVKSFIDCLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLMALFGDSMNVALLTGSVKGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVNQRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDNVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD
>NZ_CP044106.1|WP_000623917.1|1050369_1052016_-|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESESEINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAVEKANNTEDCIELMEYIIVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKLDKDEFVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDEEIVKVHVHTEYPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETAIITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNILMASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLTYAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLIEMLAEDSEILTVIIGQDAEQAVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE
>NZ_CP044106.1|WP_000171418.1|1052030_1052405_-|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRDGIAEILGHENYAKGIKVTENNGVVDIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLNVSVNSINIYVQGVRVNNTGKKA
>NZ_CP044106.1|WP_000517908.1|1052847_1053036_+|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_CP044106.1|WP_000547905.1|1053417_1054059_-|thiamine-diphosphokinase
MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFFSVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGRLDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTDDVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDGLILQIRSTDLN
>NZ_CP044106.1|WP_000164340.1|1054065_1054710_-|ribulose-phosphate-3-epimerase
MTKLYPSLLSVDFLVLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG

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Crispr_ID: NZ_CP044106_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_6

1119005-1119086

Orphan

Consensus_repeat	Method
CCAACTTGCACGTTATTGTAAGCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_6

>merge|NZ_CP044106|6|1119005-1119086|CRISPRCasFinder
CCAACTTGCACGTTATTGTAAGCTGACTTTCTGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGA

>NZ_CP044106|6|6|1119005-1119086|CRISPRCasFinder
CCAACTTGCACGTTATTGTAAGCTGA	CTTTCTGCCAGCTTCTATGTTGGGGCCCCG
CCAACTTGCACATTATTGTAAGCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000669535.1\|1123517_1123868_-\|complement-inhibitor-SCIN-family-protein	unknown	unknown	gnl\|CDD\|371594
NZ_CP044106.1\|WP_000739567.1\|1125954_1126353_+\|formyl-peptide-receptor-like-1-inhibitory-protein	unknown	unknown	gnl\|CDD\|171849
NZ_CP044106.1\|WP_000398672.1\|1108951_1109086_-\|beta-class-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|368464
NZ_CP044106.1\|WP_138269798.1\|1122161_1122410_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_001032817.1\|1122616_1122802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_001063565.1\|1117165_1117891_+\|superantigen-like-protein-SSL13	unknown	unknown	gnl\|CDD\|106307
NZ_CP044106.1\|WP_001239297.1\|1110436_1111384_+\|TDT-family-transporter	unknown	unknown	gnl\|CDD\|187765
NZ_CP044106.1\|WP_001245798.1\|1109998_1110187_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225382
NZ_CP044106.1\|WP_001802045.1\|1119328_1119553_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000793607.1\|1114906_1115908_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235269
NZ_CP044106.1\|WP_000739527.1\|1116345_1117071_+\|superantigen-like-protein-SSL14	unknown	unknown	gnl\|CDD\|171855
NZ_CP044106.1\|WP_000149420.1\|1111689_1111917_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_086032735.1\|1112224_1113730_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP044106.1\|WP_000857485.1\|1120328_1121288_+\|beta-channel-forming-cytolysin	unknown	unknown	gnl\|CDD\|273388
NZ_CP044106.1\|WP_000231631.1\|1121764_1121998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_001038858.1\|1117998_1118715_+\|superantigen-like-protein-SSL12	unknown	unknown	gnl\|CDD\|171995
NZ_CP044106.1\|WP_000765708.1\|1119509_1119656_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000791583.1\|1124021_1124519_-\|complement-convertase-inhibitor-Efb	unknown	unknown	gnl\|CDD\|289007
NZ_CP044106.1\|WP_001074342.1\|1113951_1114884_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_CP044106.1\|WP_000584398.1\|1124777_1125284_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000739567.1\|1125954_1126353_+\|formyl-peptide-receptor-like-1-inhibitory-protein	gnl\|CDD\|171849	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed.	2.298e-72
NZ_CP044106.1\|WP_000398672.1\|1108951_1109086_-\|beta-class-phenol-soluble-modulin	gnl\|CDD\|368464	pfam05480, Staph_haemo, Staphylococcus haemolytic protein. This family consists of several different short Staphylococcal proteins, it contains SLUSH A, B and C proteins as well as haemolysin and gonococcal growth inhibitor. Some strains of the coagulase-negative Staphylococcus lugdunensis produce a synergistic hemolytic activity (SLUSH), phenotypically similar to the delta-hemolysin of S. aureus. Gonococcal growth inhibitor from Staphylococcus act on the cytoplasmic membrane of the gonococcal cell causing cytoplasmic leakage and, eventually, death.	6.35158e-13
NZ_CP044106.1\|WP_001063565.1\|1117165_1117891_+\|superantigen-like-protein-SSL13	gnl\|CDD\|106307	PRK13349, PRK13349, superantigen-like protein; Reviewed.	1.53525e-151
NZ_CP044106.1\|WP_001239297.1\|1110436_1111384_+\|TDT-family-transporter	gnl\|CDD\|187765	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. This subfamily contains bacterial C4-dicarboxylate transporters, which is part of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. It includes Tellurite resistance protein tehA; the tehA gene encodes an integral membrane protein that has been shown to have efflux activity of quaternary ammonium compounds. TehA protein of Escherichia coli functions as a tellurite-resistance uptake permease.	9.26298e-84
NZ_CP044106.1\|WP_000793607.1\|1114906_1115908_-\|ornithine-carbamoyltransferase	gnl\|CDD\|235269	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional.	0
NZ_CP044106.1\|WP_000857485.1\|1120328_1121288_+\|beta-channel-forming-cytolysin	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	1.4958e-141
NZ_CP044106.1\|WP_001245798.1\|1109998_1110187_-\|hypothetical-protein	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	0.00518802
NZ_CP044106.1\|WP_000739527.1\|1116345_1117071_+\|superantigen-like-protein-SSL14	gnl\|CDD\|171855	PRK13043, PRK13043, superantigen-like protein; Reviewed.	3.05308e-161
NZ_CP044106.1\|WP_000669535.1\|1123517_1123868_-\|complement-inhibitor-SCIN-family-protein	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	6.29243e-39
NZ_CP044106.1\|WP_086032735.1\|1112224_1113730_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP044106.1\|WP_001038858.1\|1117998_1118715_+\|superantigen-like-protein-SSL12	gnl\|CDD\|171995	PRK13350, PRK13350, superantigen-like protein; Reviewed.	7.56652e-153
NZ_CP044106.1\|WP_000791583.1\|1124021_1124519_-\|complement-convertase-inhibitor-Efb	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	1.70884e-26
NZ_CP044106.1\|WP_001074342.1\|1113951_1114884_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0

>NZ_CP044106.1|WP_001038858.1|1117998_1118715_+|superantigen-like-protein-SSL12
MNKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
>NZ_CP044106.1|WP_001063565.1|1117165_1117891_+|superantigen-like-protein-SSL13
MNNNITKKIILSTTLLLLGTASTQFPNTPISSSTEAKAYYINQNETNVNELTKYYSQQHLTFSNKTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPSTDANRYVKKPQNAKIEVILEKSN
>NZ_CP044106.1|WP_000739527.1|1116345_1117071_+|superantigen-like-protein-SSL14
MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYSQPHLSLSNKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPKNAQIEVILEKSN
>NZ_CP044106.1|WP_000793607.1|1114906_1115908_-|ornithine-carbamoyltransferase
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
>NZ_CP044106.1|WP_001074342.1|1113951_1114884_-|carbamate-kinase
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
>NZ_CP044106.1|WP_086032735.1|1112224_1113730_-|YfcC-family-protein
MPGAFMILFILTVVAVIATWVIPAGAYSKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTYERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKTKGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASSVGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKKDPKASYSYEDKDAFEQQWSVLKDDDSSHFTLCKKIILTLFVLPFPIMVWGVMTQGWWFPVMASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEGMISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGGLLITQVLIYS
>NZ_CP044106.1|WP_000149420.1|1111689_1111917_-|hypothetical-protein
MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWKLRWYLLENIPHLPIILFILMFIFGVPSEMIKDRQRKNNGV
>NZ_CP044106.1|WP_001239297.1|1110436_1111384_+|TDT-family-transporter
MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMLKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTVIYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVIILLLLAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPVIWKGLLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ
>NZ_CP044106.1|WP_001245798.1|1109998_1110187_-|hypothetical-protein
MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKNERSLDNMSLKNAELLYKFANGIFSDED
>NZ_CP044106.1|WP_000398672.1|1108951_1109086_-|beta-class-phenol-soluble-modulin
MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
>NZ_CP044106.1|WP_001802045.1|1119328_1119553_-|hypothetical-protein
MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQDLRNGKTKLEDARFRTIIKLYSYYVSLKEH
>NZ_CP044106.1|WP_000765708.1|1119509_1119656_-|hypothetical-protein
MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKNDRVE
>NZ_CP044106.1|WP_000857485.1|1120328_1121288_+|beta-channel-forming-cytolysin
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN
>NZ_CP044106.1|WP_000231631.1|1121764_1121998_+|hypothetical-protein
MVFNDWEINVVYSGEHEVVANEKSLFVIDEFYDVAIAIYYLDGKLKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH
>NZ_CP044106.1|WP_138269798.1|1122161_1122410_+|hypothetical-protein
MYNIIVYIACMINFGLIIVPLLTTNDADFVWTSSSLIYMILLTSIILIVYIKTKDSLQLTIFILNIALIILYCTPLLFIYVF
>NZ_CP044106.1|WP_001032817.1|1122616_1122802_+|hypothetical-protein
MNKHINKKATKLLEDYKKVQQRKSEETDRGCLKSVIMLIVLFFLIIFGIVACSTNVNFFFQ
>NZ_CP044106.1|WP_000669535.1|1123517_1123868_-|complement-inhibitor-SCIN-family-protein
MKFKKYILTGTLALLLSSTAIATLEGNKVEASSKKDYIIQSEYHDKQIADELRSLLNKSNVYDLAAGSLNRYYKQTIMMNEHRAKAALRSNNFDKMAEAKVALEKIYKEIYEIINR
>NZ_CP044106.1|WP_000791583.1|1124021_1124519_-|complement-convertase-inhibitor-Efb
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDVTIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
>NZ_CP044106.1|WP_000584398.1|1124777_1125284_-|hypothetical-protein
MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
>NZ_CP044106.1|WP_000739567.1|1125954_1126353_+|formyl-peptide-receptor-like-1-inhibitory-protein
MKKNITKTIIASTVIAAGLLTQTNDAKAFFSYEWRGLEIAKNLADQAKKDDERADKLIKEADEKNEHYKGKTVEDLYVIAKKMGKGNTRAVVKIKDGGKNGYYTFDITRPLEEHRKNIPVVGSGEISEITWQ

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Crispr_ID: NZ_CP044106_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_7

1470579-1470664

Unclear

Consensus_repeat	Method
AGAGAAATTGGATTCCCAATTTCTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_7

>merge|NZ_CP044106|7|1470579-1470664|CRISPRCasFinder
AGAGAAATTGGATTCCCAATTTCTACAGGCAATGCGAGTTGGGGTGTGGGCCCCAACACAGAGAAATTGGATTCCCAATTTCTACA

>NZ_CP044106|7|7|1470579-1470664|CRISPRCasFinder
AGAGAAATTGGATTCCCAATTTCTACA	GGCAATGCGAGTTGGGGTGTGGGCCCCAACAC
AGAGAAATTGGATTCCCAATTTCTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_150344389.1\|1473921_1474761_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_CP044106.1\|WP_000958224.1\|1474766_1475699_-\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_CP044106.1\|WP_000675913.1\|1464398_1466033_-\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|237414
NZ_CP044106.1\|WP_001049165.1\|1466214_1466802_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP044106.1\|WP_000134959.1\|1470979_1471915_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP044106.1\|WP_000638418.1\|1481416_1481653_-\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_CP044106.1\|WP_001074749.1\|1457591_1458782_-\|phosphoglycerate-kinase	unknown	unknown	gnl\|CDD\|234613
NZ_CP044106.1\|WP_031844946.1\|1476308_1479155_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP044106.1\|WP_000816303.1\|1463162_1464065_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP044106.1\|WP_000229251.1\|1479162_1481148_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP044106.1\|WP_000654030.1\|1459983_1460997_-\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_CP044106.1\|WP_001248941.1\|1468426_1469422_-\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_CP044106.1\|WP_000070833.1\|1461830_1462460_-\|DUF4887-domain-containing-protein	unknown	unknown	gnl\|CDD\|234750
NZ_CP044106.1\|WP_150344390.1\|1482473_1483313_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP044106.1\|WP_000279414.1\|1458920_1459931_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|273675
NZ_CP044106.1\|WP_000369719.1\|1469418_1470330_-\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|224574
NZ_CP044106.1\|WP_001224799.1\|1473428_1473914_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP044106.1\|WP_000538141.1\|1481649_1482300_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_CP044106.1\|WP_000057560.1\|1471981_1473421_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP044106.1\|WP_000006551.1\|1467371_1468316_-\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_150344389.1\|1473921_1474761_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	3.82122e-118
NZ_CP044106.1\|WP_000958224.1\|1474766_1475699_-\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_CP044106.1\|WP_000675913.1\|1464398_1466033_-\|NAD-dependent-malic-enzyme	gnl\|CDD\|237414	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase.	0
NZ_CP044106.1\|WP_001049165.1\|1466214_1466802_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.59321e-148
NZ_CP044106.1\|WP_000134959.1\|1470979_1471915_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.60472e-153
NZ_CP044106.1\|WP_000638418.1\|1481416_1481653_-\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	1.44625e-33
NZ_CP044106.1\|WP_001074749.1\|1457591_1458782_-\|phosphoglycerate-kinase	gnl\|CDD\|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP044106.1\|WP_031844946.1\|1476308_1479155_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP044106.1\|WP_000816303.1\|1463162_1464065_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	5.99111e-153
NZ_CP044106.1\|WP_000229251.1\|1479162_1481148_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP044106.1\|WP_000654030.1\|1459983_1460997_-\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	1.39665e-92
NZ_CP044106.1\|WP_001248941.1\|1468426_1469422_-\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	7.82391e-173
NZ_CP044106.1\|WP_000070833.1\|1461830_1462460_-\|DUF4887-domain-containing-protein	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	4.1716e-05
NZ_CP044106.1\|WP_150344390.1\|1482473_1483313_-\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	1.64505e-40
NZ_CP044106.1\|WP_000279414.1\|1458920_1459931_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|273675	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I. This model represents glyceraldehyde-3-phosphate dehydrogenase (GAPDH), the enzyme responsible for the interconversion of 1,3-diphosphoglycerate and glyceraldehyde-3-phosphate, a central step in glycolysis and gluconeogenesis. Forms exist which utilize NAD (EC 1.2.1.12), NADP (EC 1.2.1.13) or either (1.2.1.59). In some species, NAD- and NADP- utilizing forms exist, generally being responsible for reactions in the anabolic and catabolic directions respectively. Two Pfam models cover the two functional domains of this protein; pfam00044 represents the N-terminal NAD(P)-binding domain and pfam02800 represents the C-terminal catalytic domain. An additional form of gap gene is found in gamma proteobacteria and is responsible for the conversion of erythrose-4-phosphate (E4P) to 4-phospho-erythronate in the biosynthesis of pyridoxine. This pathway of pyridoxine biosynthesis appears to be limited, however, to a relatively small number of bacterial species although it is prevalent among the gamma-proteobacteria. This enzyme is described by TIGR001532. These sequences generally score between trusted and noise to this GAPDH model due to the close evolutionary relationship. There exists the possiblity that some forms of GAPDH may be bifunctional and act on E4P in species which make pyridoxine and via hydroxythreonine and lack a separate E4PDH enzyme (for instance, the GAPDH from Bacillus stearothermophilus has been shown to posess a limited E4PD activity as well as a robust GAPDH activity). There are a great number of sequences in the databases which score between trusted and noise to this model, nearly all of them due to fragmentary sequences. It seems that study of this gene has been carried out in many species utilizing PCR probes which exclude the extreme ends of the consenses used to define this model. The noise level is set relative not to E4PD, but the next closest outliers, the class II GAPDH's (found in archaea, TIGR01546) and aspartate semialdehyde dehydrogenase (ASADH, TIGR01296) both of which have highest-scoring hits around -225 to the prior model. [Energy metabolism, Glycolysis/gluconeogenesis].	0
NZ_CP044106.1\|WP_000369719.1\|1469418_1470330_-\|RNase-adapter-RapZ	gnl\|CDD\|224574	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only].	2.63933e-170
NZ_CP044106.1\|WP_001224799.1\|1473428_1473914_-\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	9.46387e-30
NZ_CP044106.1\|WP_000538141.1\|1481649_1482300_-\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_CP044106.1\|WP_000057560.1\|1471981_1473421_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.447e-06
NZ_CP044106.1\|WP_000006551.1\|1467371_1468316_-\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	7.40812e-153

>NZ_CP044106.1|WP_000369719.1|1469418_1470330_-|RNase-adapter-RapZ
MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKKSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
>NZ_CP044106.1|WP_001248941.1|1468426_1469422_-|YvcK-family-protein
MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNPQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK
>NZ_CP044106.1|WP_000006551.1|1467371_1468316_-|DNA-binding-protein-WhiA
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>NZ_CP044106.1|WP_001049165.1|1466214_1466802_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
>NZ_CP044106.1|WP_000675913.1|1464398_1466033_-|NAD-dependent-malic-enzyme
MKGIELLNNPFLNKGTAFTNEERKQLGLEGLLPANVRTLEQQAEQCYEQFKAKQTDFEKRLFLMAIFNRNRTLFYKLTSEHLVEFMPIIYDPVIAQSIEQYNENFSRPQDAVFLSVDRQDQIEQELRNVANGRDIRLIVVTDAEGILGIGDWGVDGVDIAIGKLIVYTAAAGINPSQVLPVSLDVGTNNEQLLKDDLYLGNRHKRVDDETYYAFVDKFVSAVRKEYPNALLHWEDFGRGHAKNILDKYEDTLPTFNDDIQGTGIVTLAGVLGALNISKVDYTNQTFLVYGGGTAGMGITNILKDELIKQGVSEEKANQHFYIMDKQGLLFDDMDDLTEAQQVFAKNRNEFSNTVNWKNLKEVIENIKPTVLIGTSTQTGAFTEDAVKEMLKHTERPMIFPLSNPTKLAEATAQDLLKWTNGKALIGTGIPYNDIEYNGVNYSIGQANNALMYPGLGLGLIASKAKKVNQQILSAASHALGGMVNPDEPGAAVLPPVEKIHQCSRAIAKAVAQSVIDQGLNAETIDDIDKAIEAEIWYPEYKSYI
>NZ_CP044106.1|WP_000816303.1|1463162_1464065_+|TIGR01777-family-protein
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGMILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPNLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLISK
>NZ_CP044106.1|WP_000070833.1|1461830_1462460_-|DUF4887-domain-containing-protein
MSNQNYDYNKNEDGSKKKMSTTAKVVSIATVLLLLGGLVFAIFAYVDHSNKAKERMLNEQKQEQKEKRQKENAEKERKKKQQEEKEQNELDSQANQYQQLPQQNQYQYVPPQQQAPTKQRPAKEENDDKASKDETKDKDDKASQDKSDDNQKKTDDNKQPAQPKPQPQQPTPKPNNNQQSNQSNQQAKPQAPQQNSQSTTNKQNNANDK
>NZ_CP044106.1|WP_000654030.1|1459983_1460997_-|sugar-binding-transcriptional-regulator
MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLLPYNVFFVPARGGLGENVVFQANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLLEPSVINTLDKIKQANVILHGIGDALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQGQIVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKIILE
>NZ_CP044106.1|WP_000279414.1|1458920_1459931_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
>NZ_CP044106.1|WP_001074749.1|1457591_1458782_-|phosphoglycerate-kinase
MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGISLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
>NZ_CP044106.1|WP_000134959.1|1470979_1471915_-|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIMTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA
>NZ_CP044106.1|WP_000057560.1|1471981_1473421_-|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMANQKFKQREYKRAAEYFEKVLELSPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWEIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYHNELFVSENDLMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_CP044106.1|WP_001224799.1|1473428_1473914_-|acetyltransferase
MRKFLSKTYHHTNPLWHVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLIGANAIILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_CP044106.1|WP_150344389.1|1473921_1474761_-|prolipoprotein-diacylglyceryl-transferase
MGIVFNYIDPVAFNLGLLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIVARIYFVIFQWPYYAENPGEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
>NZ_CP044106.1|WP_000958224.1|1474766_1475699_-|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_CP044106.1|WP_031844946.1|1476308_1479155_-|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNINLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGAPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKLKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_CP044106.1|WP_000229251.1|1479162_1481148_-|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLIMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_CP044106.1|WP_000638418.1|1481416_1481653_-|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWIGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_CP044106.1|WP_000538141.1|1481649_1482300_-|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_CP044106.1|WP_150344390.1|1482473_1483313_-|CHAP-domain-containing-protein
MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKVVKSPVRKASQAKKVVKQPVQQASKKVVVNQAPKQAVAKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTSEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH

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Crispr_ID: NZ_CP044106_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_8

1516964-1517048

Orphan

Consensus_repeat	Method
TGTTGGGGCCCACCCCAACTCGCATTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_8

>merge|NZ_CP044106|8|1516964-1517048|CRISPRCasFinder
TGTTGGGGCCCACCCCAACTCGCATTGCCTGTAGAAATTGGCGTTCCAATTTCTCTGTGTTGGGGCCCCACCCCAACTCGCATTG

>NZ_CP044106|8|8|1516964-1517048|CRISPRCasFinder
TGTTGGGGCCCACCCCAACTCGCATTG	CCTGTAGAAATTGGCGTTCCAATTTCTCTGT
GTTGGGGCCCCACCCCAACTCGCATTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000022323.1\|1528945_1529950_-\|biotin-dependent-carboxyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224895
NZ_CP044106.1\|WP_000692521.1\|1510909_1511308_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|224694
NZ_CP044106.1\|WP_000663039.1\|1517837_1518896_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235106
NZ_CP044106.1\|WP_000429011.1\|1515611_1516529_+\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP044106.1\|WP_000930014.1\|1512994_1513495_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|223851
NZ_CP044106.1\|WP_000708692.1\|1529933_1530644_-\|allophanate-hydrolase-subunit-1	unknown	unknown	gnl\|CDD\|224960
NZ_CP044106.1\|WP_001790091.1\|1511457_1511724_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000589262.1\|1520642_1521620_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224050
NZ_CP044106.1\|WP_000098285.1\|1526531_1528472_-\|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS	unknown	unknown	gnl\|CDD\|224287
NZ_CP044106.1\|WP_000562499.1\|1507752_1508724_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP044106.1\|WP_000193751.1\|1513834_1515340_+\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_CP044106.1\|WP_031760357.1\|1515417_1515519_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000525113.1\|1523634_1525518_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP044106.1\|WP_001068497.1\|1512108_1512975_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP044106.1\|WP_000983680.1\|1521841_1523623_-\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_CP044106.1\|WP_071665613.1\|1513524_1513773_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000180997.1\|1519135_1520650_-\|ABC-transporter-permease/substrate-binding-protein	unknown	unknown	gnl\|CDD\|270328
NZ_CP044106.1\|WP_000855505.1\|1508841_1510947_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236069
NZ_CP044106.1\|WP_064128952.1\|1525862_1526348_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP044106.1\|WP_000197262.1\|1517136_1517679_-\|5'-3'-deoxyribonucleotidase	unknown	unknown	gnl\|CDD\|226895

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000022323.1\|1528945_1529950_-\|biotin-dependent-carboxyltransferase-family-protein	gnl\|CDD\|224895	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism].	1.25641e-144
NZ_CP044106.1\|WP_000692521.1\|1510909_1511308_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|224694	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism].	5.52807e-56
NZ_CP044106.1\|WP_000197262.1\|1517136_1517679_-\|5'-3'-deoxyribonucleotidase	gnl\|CDD\|226895	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism].	3.14113e-108
NZ_CP044106.1\|WP_000429011.1\|1515611_1516529_+\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	1.47588e-77
NZ_CP044106.1\|WP_000930014.1\|1512994_1513495_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|223851	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only].	7.91282e-79
NZ_CP044106.1\|WP_000098285.1\|1526531_1528472_-\|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	0
NZ_CP044106.1\|WP_000708692.1\|1529933_1530644_-\|allophanate-hydrolase-subunit-1	gnl\|CDD\|224960	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism].	1.29969e-94
NZ_CP044106.1\|WP_000180997.1\|1519135_1520650_-\|ABC-transporter-permease/substrate-binding-protein	gnl\|CDD\|270328	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold. Osmoprotectant binding lipoprotein ChoS of Lactococcus lactis is predicted to be involved in uptake of compatible solutes such as choline and glycine betaine, but the relative substrate preference is not known. To counteract the efflux of water, microorganisms accumulate the compatible solutes for a sustained adjustment to high osmolarity surroundings. ChoS belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.75128e-152
NZ_CP044106.1\|WP_000193751.1\|1513834_1515340_+\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.22605e-172
NZ_CP044106.1\|WP_000562499.1\|1507752_1508724_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	2.0974e-164
NZ_CP044106.1\|WP_000525113.1\|1523634_1525518_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP044106.1\|WP_001068497.1\|1512108_1512975_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	3.8323e-10
NZ_CP044106.1\|WP_000983680.1\|1521841_1523623_-\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP044106.1\|WP_000589262.1\|1520642_1521620_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224050	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism].	3.31335e-155
NZ_CP044106.1\|WP_000855505.1\|1508841_1510947_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236069	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP044106.1\|WP_064128952.1\|1525862_1526348_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	2.23101e-46
NZ_CP044106.1\|WP_000663039.1\|1517837_1518896_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235106	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional.	0

>NZ_CP044106.1|WP_000429011.1|1515611_1516529_+|diacylglycerol-kinase-family-lipid-kinase
MENKYTHGVLFYHEHSGLKNINQGIGEVTTALSSICKHLSIQLSENEGDIIKYCQEIKTKNYAKDVDILFILGGDGTVNELINGVMTHDLQLPIGILPGGTFNDFTKTLNIAPNHKQASEQMISAQVGTYDVIKINNQYALNFVGLGLIVQNAENVQDGSKDIFGKLSYIGSTVKTLLNPTQFNYQLSIDDKTYSGETTMILSANGPFIGGSRIPLTDLSPQDGELNTFIFNEQSFSILNDIFKKRDSMNWNEITQGIEHIPGKKISLTTDPAMKVDIDGEISLETPIDIEVIPNAIQLLTVNDL
>NZ_CP044106.1|WP_031760357.1|1515417_1515519_-|hypothetical-protein
MVITDIDVYRVGRENIVIAVYNEHIKLLFILIS
>NZ_CP044106.1|WP_000193751.1|1513834_1515340_+|peptide-MFS-transporter
MTQQNSHGNQIQDIPQTGFFGHPRGLGVLFFVEFWERFSYYGMRALLIFYMYFAVTDNGLGIDKTTAMSIMSVYGSLIYMTSIPGGWIADRITGTRGATLLGAVFIIIGHICLSLPFALIGLFTSMFFIIIGSGLMKPNISNIVGRLYPENDRRMDAGFVIFYMSVNMGALLSPIILQHFVNVKNFHGGFLIAAVGMALGLVWYVLFNRKNLGSVGMKPTNPLTPAEKKKYGLIIGSVVLAIVLIIVIGALTNSLSFNLVSNTVLVLGIALPIIYFTLIIRSKDVTDTERSRVKAFIPLFILGMVFWAIQEQGSNVLNIYGIEHSDMKLNLFGWKTNFGEAIFQSINPLFILLLAPIISLLWQKLGTKQPSLPVKFAIGTFLAGASYILIGIVGYASGSSNFSVNWVILSYIICVIGELCLSPTGNSAAVKLAPKAFNAQMMSIWYLTNASAQAINGTLVKLIEPLGQTNYFIFLGVVAIIVTTIVLAFSPLIIKAMKGIR
>NZ_CP044106.1|WP_071665613.1|1513524_1513773_+|hypothetical-protein
MIFLTYWCVFHLAYIIGYIKITFYTKVHQKNISTRIKQHFYRNLLHFNVNKYIFILSLINCARLIAEYSQYFYFFVICGIFS
>NZ_CP044106.1|WP_000930014.1|1512994_1513495_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MAHGRQQDELQDITLLGNQDNTYNFDYRPDVLESFDNKHQGRDYFVKFNCPEFTSLCPITGQPDFATIYISYIPNVKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPHYIEVWGKFTPRGGISIDPYTNYGRPNSKYEKMAEHRLMNHDLYPEKIDNR
>NZ_CP044106.1|WP_001068497.1|1512108_1512975_+|DMT-family-transporter
MNPKVKGIIAILISAIGFSFMSVFFRLAGDLPVFQKSLARNLVAMFIPLFFIYKYHQPMFGRLSSQPLLITRSTLGLIGVLLNIYAIDHMVLSDADSLMKLNPFWTILLSIVFLHEKVRKYQITAMIIAILGMLLIVKPEFSSSMIPSLAGLFSGIFAASAYTCVRALSTREAPYTIVFYFSLFSVIVLIPFTAYTYEPMSQMQILYLLGAGLAAAVGQIGVTLAYSFAAAKDISIFTYASIIFTAILGFILFGESPDFYATLGYVVIIGASYYMFEKARRDAKIIKK
>NZ_CP044106.1|WP_001790091.1|1511457_1511724_-|hypothetical-protein
MCLMYNETHNIVLVKRKRHNILCFVCKCFIYEEITFKSNLTQKFNSYYQLIVIFLENVLSKWKISNDVNTTYSDFYTFNPYKLLFSQI
>NZ_CP044106.1|WP_000692521.1|1510909_1511308_-|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
>NZ_CP044106.1|WP_000855505.1|1508841_1510947_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MKTMEEKKYNHIELNNEVTKRREDGFFSLEKDQEALVAYLEEVKDKTIFFDTEIERLRYLVDNDFYFNVFDIYSEADLIEITDYAKSIPFNFASYMSASKFFKDYALKTNDKSQYLEDYNQHVAIVALYLANGNKAQAKQFISAMVEQRYQPATPTFLNAGRARRGELVSCFLLEVDDSLNSINFIDSTAKQLSKIGGGVAINLSKLRARGEAIKGIKGVAKGVLPIAKSLEGGFSYADQLGQRPGAGAVYLNIFHYDVEEFLDTKKVNADEDLRLSTISTGLIVPSKFFDLAKEGKDFYMFAPHTVKEEYGVTLDDIDLEKYYDDMVANPNVEKKKKNAREMLNLIAQTQLQSGYPYLMFKDNANRVHPNSNIGQIKMSNLCTEIFQLQETSIINDYGIEDEIKRDISCNLGSLNIVNVMESGKFRDSVHSGMDALTVVSDVANIQNAPGVRKANSELHSVGLGVMNLHGYLAKNKIGYESEEAKDFANIFFMMMNFYSIERSMEIAKERGIKYQDFEKSDYANGKYFEFYTTQEFEPQFEKVRELFDGMAIPTSEDWKKLQQDVEQYGLYHAYRLAIAPTQSISYVQNATSSVMPIVDQIERRTYGNAETFYPMPFLSPQTMWYYKSAFNTDQMKLIDLIATIQTHIDQGISTILYVNSEISTRELARLYVYAHYKGLKSLYYTRNKLLSVEECTSCSI
>NZ_CP044106.1|WP_000562499.1|1507752_1508724_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MIAVNWNTQEDMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKYKSDKIVANYHKLWGKEASIYDQYMARVTSVFLETFLFFSGFYYPLYLAGQGKMTTSGEIIRKILLDESIHGVFTGLDAQHLRNELSESEKQKADQEMYKLLNDLYLNEESYTKMLYDDLGITEDVLNYVKYNGNKALSNLGFEPYFEESEFNPIIENALDTTTKNHDFFSVKGDGYVLALNVEALQDDDFVFDNK
>NZ_CP044106.1|WP_000197262.1|1517136_1517679_-|5'-3'-deoxyribonucleotidase
MTRKSIAIDMDEVLADTLGEIIDAVNFRADLGIKMEALNGQKLKHVIPEHDGLITEVLREPGFFRHLKVMPHAQEVVKKLTEHYDVYIATAAMDVPTSFSDKYEWLLEFFPFLDPQHFVFCGRKNIVKADYLIDDNPRQLEIFTGTPIMFTAVHNINDDRFERVNSWKDVEQYFLDNIEK
>NZ_CP044106.1|WP_000663039.1|1517837_1518896_-|histidinol-phosphate-transaminase
MKEQLNQLSAYQPGLSPRALKEKYGIEGDLYKLASNENLYGPSPKVKEAISSHLDELYYYPETGSPTLKAAISKHLNVDQSRILFGAGLDEVILMISRAVLTPGDTIVTSEATFGQYYHNAIVESANVIQVPLKDGGFDLEGILKEVNEDTSLVWLCNPNNPTGTYFNHESLDSFLSQVPPHVPVIIDEAYFEFVTAEDYPDTLALQQKYDNAFLLRTFSKAYGLAGLRVGYVVASEHAIEKWNIIRPPFNVTRISEYAAVAALEDQQYLKEVTHKNSVERERFYQLPQSEHFLPSQTNFIFVKTKRVNELYEALLNVGCITRPFPTGVRITIGFKEQNDKMLEVLSNFKYE
>NZ_CP044106.1|WP_000180997.1|1519135_1520650_-|ABC-transporter-permease/substrate-binding-protein
MTNFFDILSERKGQLFSTMIEHIQISFIALLIATAIAVPLGILLTKTKTISEIVMNIAAILQTIPSLALLGLMIPLFGIGRVPAIIALVVYALLPILRNTYTGIKEVDPSLIEAAKGIGMKPFRRLTKVELPIAMPVIMAGVRTAMVLIIGTATLAALIGAGGLGDLILLGIDRNNASLILLGAIPAALLAIIFDLILRLMAKLSYKKLLMTLGVIVMIIILAIAIPMFAQKGDKITLAGKLGSEPSIITNMYKILIEEETKNTVEVKDGMGKTAFLFNALKSDDIDGYLEFTGTVLGELTKEPLKSKEEKKVYEQAKQSLEKKYQMTMLKPMKYNNTYALAVKRDFAKQHNIRTIGDLNKVKDQLKPGFTLEFNDRPDGYKAVQKAYNLNLDNIRTMEPKLRYQAINKGNINLIDAYSTDAELKQYDMVVLKDDKHVFPPYQGAPLFKESFLKKHPEIKKPLNKLENKISDEDMQMMNYKVTVKNEDPYTVAKDYLKAKGLIK
>NZ_CP044106.1|WP_000589262.1|1520642_1521620_-|ABC-transporter-ATP-binding-protein
MIKFKNVTKRYGKHVAVDNISFNINEGEFFVLIGPSGCGKTTTLKMINRLIHLSEGYIYFKDKPISDYPVYEMRWDIGYVLQQIALFPHMTIKENIAQVPQMKKWKEKDIDKRVDELLEMVGLEPEKYKNRKPDELSGGQRQRVGVIRALAADPPVILMDEPFSALDPISREKLQDDLIELQTKIKKTIIFVTHDIQEAMKLGDKICLLNEGHIEQIDTPEGFKNNPQSEFVKQFMGSHLEDDAPCVEENAIIRDLDIMKPIDEVTTMSAYPIVYDNQQIEVLYQHLSESERVIVMQEDSVGQYVIDRKDIFKYLSQKKEVAQHD
>NZ_CP044106.1|WP_000983680.1|1521841_1523623_-|DNA-helicase-RecQ
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFVLDYIKTHDEDAGIIYCSTRKQVEELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIHYNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
>NZ_CP044106.1|WP_000525113.1|1523634_1525518_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MGMEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMMDAQEAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNVLSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEIAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSSTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
>NZ_CP044106.1|WP_064128952.1|1525862_1526348_-|IS200/IS605-family-transposase
MSSDTNSLAHTKWNCKYHIVFAPKYRRQVIYGKIKKDIGIILRQLCERKGVEIIEAEACKDHIHMLVSIPPKLGVSSFVGYLKGKSSLMIFDRHANLKYRYGNRNFWCKGFYVDTVGRNKKVIENYIRNQLQEDIVADQISMEEYLDPFTGEKNRKRKKKE
>NZ_CP044106.1|WP_000098285.1|1526531_1528472_-|polyglycerol-phosphate-lipoteichoic-acid-synthase-LtaS
MSSQKKKISLFAFFLLTVITITLKTYFSYYVDFSLGVKGLVQNLILLMNPYSLVALVLSVFLFFKGKKAFWFMFIGGFLLTFLLYANVVYFRFFSDFLTFSTLNQVGNVESMGGAVSASFKWYDFVYFIDTLVYLFILIFKTKWLDTKAFSKKFVPVVMAASVALFFLNLAFAETDRPELLTRTFDHKYLVKYLGPYNFTVYDGVKTIENNQQKALASEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTLDEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTDLNRTGFWIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGDFITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPKANSKK
>NZ_CP044106.1|WP_000022323.1|1528945_1529950_-|biotin-dependent-carboxyltransferase-family-protein
MSIIIEKSGLFSSFQDFGRRGYEHDGVIPCGALDTLAHEIANRLVANDKNEATLEMTNKMATIRFTEPTLIALAGGNVKAYTEHMTISPYKLYLLDKGDVLKFRETSYTSRVYLAVGGGFELDAWLGSNSTDFNVKIGGFKGRTLQDGDEIKLKRDYTARHHKLFENLAHTKQTDWGIDGYALSFNYMSDVFHVVKNKGTEDFKEDAIQRFVKHDYKVTSKANRMGMMLEGEKIKAFYEDMPPYQTVKKGTIQIKRDGTPIILLNDHYTLGSYPQIGTIASYHLTKLAQKPQGSRLKFQFIDILTAEKNLVKYSNWLNQLFHGIEYRMQLEMMK
>NZ_CP044106.1|WP_000708692.1|1529933_1530644_-|allophanate-hydrolase-subunit-1
MKIYSQGDQAIVVAIEKEVSKSLTEDLLTLRSYLIEQNYPFIIEIVPSESDMMIVYDARDMIKHHNIQSPFLYMKALIESIHLNIKHDFNQQDLIEIPIVYGSKYGPDLESLLKHYKIKLETFIELHSKAQYFVSMMGYSPGFPYLTGLNKKLYINHTSKQKKFIPAGSVVLEGKKCGIVTTDTINDWLVIGYTPLSLFNPKESDFARLKLGDNIKFRPINENELEVGAFKDVNHN

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Crispr_ID: NZ_CP044106_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_9

2283860-2283945

Orphan

Consensus_repeat	Method
AAAGTCAGCTTACAATAATGTGCAAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_9

>merge|NZ_CP044106|9|2283860-2283945|CRISPRCasFinder
AAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGG

>NZ_CP044106|9|9|2283860-2283945|CRISPRCasFinder
AAAGTCAGCTTACAATAATGTGCAAGTTGG	CGGGGCCCCAACATAGAAGCTGGCGG
AAAGTCAGCTTACAATAATGTGCAAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000362507.1\|2278634_2280014_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP044106.1\|WP_001290433.1\|2275787_2277149_-\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_CP044106.1\|WP_000143679.1\|2288559_2290440_-\|peptide-resistance-ABC-transporter-permease-subunit-VraE	unknown	unknown	gnl\|CDD\|376899
NZ_CP044106.1\|WP_000240855.1\|2277879_2278017_+\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|366117
NZ_CP044106.1\|WP_000154165.1\|2290429_2291188_-\|peptide-resistance-ABC-transporter-ATP-binding-subunit-VraD	unknown	unknown	gnl\|CDD\|224059
NZ_CP044106.1\|WP_000672028.1\|2288275_2288467_-\|peptide-resistance-ABC-transporter-activity-modulator-VraH	unknown	unknown	unknown
NZ_CP044106.1\|WP_001789343.1\|2278137_2278491_+\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|234782
NZ_CP044106.1\|WP_001789359.1\|2273750_2273996_-\|S4-domain-containing-protein-YaaA	unknown	unknown	gnl\|CDD\|274378
NZ_CP044106.1\|WP_000491384.1\|2284168_2284522_+\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP044106.1\|WP_000215588.1\|2281957_2282677_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP044106.1\|WP_001054123.1\|2285235_2285805_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP044106.1\|WP_000672036.1\|2286523_2286715_-\|peptide-resistance-ABC-transporter-activity-modulator-VraH	unknown	unknown	unknown
NZ_CP044106.1\|WP_000742837.1\|2282719_2283559_+\|nucleoid-occlusion-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP044106.1\|WP_001059079.1\|2285931_2286132_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP044106.1\|WP_000969811.1\|2274376_2275510_-\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NZ_CP044106.1\|WP_000249657.1\|2280080_2281958_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP044106.1\|WP_000779135.1\|2284589_2284985_+\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP044106.1\|WP_000586238.1\|2287171_2287669_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000410770.1\|2291477_2291990_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP044106.1\|WP_000775117.1\|2272641_2273754_-\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|273173

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000362507.1\|2278634_2280014_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP044106.1\|WP_001290433.1\|2275787_2277149_-\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP044106.1\|WP_000143679.1\|2288559_2290440_-\|peptide-resistance-ABC-transporter-permease-subunit-VraE	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	3.10596e-06
NZ_CP044106.1\|WP_000240855.1\|2277879_2278017_+\|50S-ribosomal-protein-L34	gnl\|CDD\|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	8.39798e-10
NZ_CP044106.1\|WP_001789343.1\|2278137_2278491_+\|ribonuclease-P-protein-component	gnl\|CDD\|234782	PRK00499, rnpA, ribonuclease P; Reviewed.	3.11548e-51
NZ_CP044106.1\|WP_001789359.1\|2273750_2273996_-\|S4-domain-containing-protein-YaaA	gnl\|CDD\|274378	TIGR02988, YaaA_near_RecF, S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage. [DNA metabolism, DNA replication, recombination, and repair].	1.44335e-24
NZ_CP044106.1\|WP_000491384.1\|2284168_2284522_+\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.88155e-38
NZ_CP044106.1\|WP_000215588.1\|2281957_2282677_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	3.12556e-96
NZ_CP044106.1\|WP_001054123.1\|2285235_2285805_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.69728e-16
NZ_CP044106.1\|WP_000154165.1\|2290429_2291188_-\|peptide-resistance-ABC-transporter-ATP-binding-subunit-VraD	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.25186e-109
NZ_CP044106.1\|WP_000742837.1\|2282719_2283559_+\|nucleoid-occlusion-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.327e-113
NZ_CP044106.1\|WP_001059079.1\|2285931_2286132_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.4289e-30
NZ_CP044106.1\|WP_000969811.1\|2274376_2275510_-\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	3.87922e-156
NZ_CP044106.1\|WP_000249657.1\|2280080_2281958_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP044106.1\|WP_000779135.1\|2284589_2284985_+\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	6.39285e-39
NZ_CP044106.1\|WP_000410770.1\|2291477_2291990_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	3.26175e-22
NZ_CP044106.1\|WP_000775117.1\|2272641_2273754_-\|DNA-replication/repair-protein-RecF	gnl\|CDD\|273173	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein. All proteins in this family for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	4.72951e-173

>NZ_CP044106.1|WP_000742837.1|2282719_2283559_+|nucleoid-occlusion-protein
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR
>NZ_CP044106.1|WP_000215588.1|2281957_2282677_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MTVEWLAEQLKEHNIELTETQKQQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPLLEK
>NZ_CP044106.1|WP_000249657.1|2280080_2281958_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQGKLQRVSD
>NZ_CP044106.1|WP_000362507.1|2278634_2280014_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MDLDTITSISTPMGEGAIGIVRLSGPQAVEIADKLYKGKHLLNDVPSHTINYGHIIDPESKEVVEEVMVSVLRAPKTFTREDIIEINCHGGILTINRVLELTMTYGARMAEPGEFTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKKQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLEQSKEIKQEINHLLDTGAQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDTAGIRETEDIVEKIGVERSRKALSQADLILFVLNNNEALTQEDYTLYEVVKNEDVIVIVNKMDLEQNIDINEVKDMIGDTPLIQTSMLKQEGIDELEIQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARQTIQDAIDAAESGVPMDMVQIDLTRTWEILGEIIGETASDELIDQLFSQFCLGK
>NZ_CP044106.1|WP_001789343.1|2278137_2278491_+|ribonuclease-P-protein-component
MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
>NZ_CP044106.1|WP_000240855.1|2277879_2278017_+|50S-ribosomal-protein-L34
MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA
>NZ_CP044106.1|WP_001290433.1|2275787_2277149_-|chromosomal-replication-initiator-protein-DnaA
MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
>NZ_CP044106.1|WP_000969811.1|2274376_2275510_-|DNA-polymerase-III-subunit-beta
MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVILTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDNEEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAIDRASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY
>NZ_CP044106.1|WP_001789359.1|2273750_2273996_-|S4-domain-containing-protein-YaaA
MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ
>NZ_CP044106.1|WP_000775117.1|2272641_2273754_-|DNA-replication/repair-protein-RecF
MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYTQNEAARLEDIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK
>NZ_CP044106.1|WP_000491384.1|2284168_2284522_+|DUF3147-family-protein
MFSIGSAILHFVIGGIAVALASIIADKVGGKLGGIIATMPAVFLAAIIALALDHRGTQLVEMSMNLSTGAIVGILSCILTVFLTSLYINHKGYRKGAIFTVVCWFVISLAIFSIRHL
>NZ_CP044106.1|WP_000779135.1|2284589_2284985_+|DUF3147-family-protein
MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGLLSWFISAVCIFEAVEFIAQKRLEKHSWKAGKTNSK
>NZ_CP044106.1|WP_001054123.1|2285235_2285805_+|helix-turn-helix-transcriptional-regulator
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNLWAYVMIIFMTLAAILTGPLIVYWNWAWGITVMVIYGIGYYASMKIEDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNIKTSVLSFIAFVGAIILVALISMYLANKFL
>NZ_CP044106.1|WP_001059079.1|2285931_2286132_-|cold-shock-protein
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV
>NZ_CP044106.1|WP_000672036.1|2286523_2286715_-|peptide-resistance-ABC-transporter-activity-modulator-VraH
MKFRELVKQSYEDLKNLTVTWYNVIALAMIVIVLSVVTTPIIGIPVGLLGGAYYLKRREEKGK
>NZ_CP044106.1|WP_000586238.1|2287171_2287669_+|hypothetical-protein
MIINLETQQIHFDLEHETPYFQSPEKNRIRLDIDVLNKKQISNIINVIFNNQSKTKCTFLSEYLYPVKFREKTRIGRFFNITNWYEEIHSTDEKYVIATIKNIKNKDLIDYSLYIKKGLVEPFIVFYNQENIFYISNTVIDIISVSKDTLGYIKSEFNDHCASPY
>NZ_CP044106.1|WP_000672028.1|2288275_2288467_-|peptide-resistance-ABC-transporter-activity-modulator-VraH
MKFRELVKQSYEDLKNLTVTWYNVIALAMIVIVLSSVTTPIIGIPAGLLGGAYYLKRREEKGK
>NZ_CP044106.1|WP_000143679.1|2288559_2290440_-|peptide-resistance-ABC-transporter-permease-subunit-VraE
MTFNHIVLKNLRQNLKHYAMYLFSLFFSIVLYFSFTTLQFTKGVNNDDSMAIIKKGALVGSIFLFIIIVIFLMYANHLFVKRRTREFALFQLIGLTRQNILKMLALEQMIVFLITGVVGVLCGIAGAQLLLSIVSKLMSLSINLSIHFEPMALVLTILMLIIAYILILFQSSLFLKRRSILSMMKDSIKTDVTTAKVTTAEVISGVLGIAMIALGYYMATEMFGTFKALTMAMTSPFIILFLTVVGAYLFFRSSVSLIFKTLKKSKNGRVSITDVVFTSSIMYRMKKNAMSLTIIAIISAVTVTVLCFAALSKSNTDQTLISMAPNEFNVVASQDAQQFESKLSQQHITFTKNYYETITVNNVKDQVITLENGSDSGRTNSILSANTKLTGNNAIITNTKSLPNIINIHLNKDLVVKGTKNETFRVTQEDKGKVYPLNLSFNSPVVEVSPEKYQQLKTQNNVHTFYGYDIKQTSQKEKAQAIAKQFGDKVITYDDMKKEVDATNGILIFVTSFLGLAFLVAAGCIIYIKQMDETEDELSNFRILKRIGFTHTDMLKGLLLKITFNFGLPLLIAILHAVFAAIAFMKLMGNISFMPVIIVIIVYTLIYIVFALIAFVHSNKLIKKTI
>NZ_CP044106.1|WP_000154165.1|2290429_2291188_-|peptide-resistance-ABC-transporter-ATP-binding-subunit-VraD
MTILSVQHVSKTYGKKHTFQALKDINFDIQKGEFVAIMGPSGSGKTTLLNVLSSIDQISSGSVIANGQELNKLNQKALAKFRKESLGFIFQDYSILPTLTVKENIMLPLSVQKMSKATMEENYKAITTALGIYDLGNKYTSELSGGQQQRTAAARAFVHKPQIIFADEPTGALDSKSANDLLQRLEEMNKSFDTTIVMVTHDPVAASFAERVIMLKDGQIHTQLYQEGRSKQAFYEDIVHLQSVLGGVSNDI
>NZ_CP044106.1|WP_000410770.1|2291477_2291990_+|HdeD-family-acid-resistance-protein
MEKGNQGIKWSSLIMGVLLLMLAVVIFTFPIENFYAITWLIGLFVLINGVIQIVYRRKAKALVGGNQNWILFMGIVDILFGLIVIFNVGASSAFFIYMFAFWFIFSSIAGLFTFSGSGSLKLISVIFNLLGIVFGVILLFNPLMGIVFISTMIAIAFVFVGVIYVVDALA

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Crispr_ID: NZ_CP044106_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_10

2530559-2530692

Orphan

Consensus_repeat	Method
TATTGAAGAAGATACAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP044106_10

>merge|NZ_CP044106|10|2530559-2530692|PILER-CR
TATTGAAGAAGATACAAACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGATTTTGAAGAAGATACACTTCCAAAAGTAAGCGGTCAAAATGAAGGTCAACAAACGATTGAAGAAGATACAA

>NZ_CP044106|10|1|2530559-2530692|PILER-CR
TATTGAAGAAGATACAA	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGA
TTTTGAAGAAGATACAC	TTCCAAAAGTAAGCGGTCAAAATGAAGGTCAACAAAC
GATTGAAGAAGATACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_014363480.1\|2519490_2521314_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP044106.1\|WP_000289136.1\|2522099_2522792_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP044106.1\|WP_000356869.1\|2545561_2547199_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP044106.1\|WP_112380509.1\|2537784_2542668_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|375909
NZ_CP044106.1\|WP_000998872.1\|2537122_2537479_+\|HTH-type-transcriptional-regulator-SarT	unknown	unknown	gnl\|CDD\|130944
NZ_CP044106.1\|WP_000876641.1\|2524578_2526132_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP044106.1\|WP_000386370.1\|2536055_2536799_-\|HTH-type-transcriptional-regulator-SarU	unknown	unknown	gnl\|CDD\|130944
NZ_CP044106.1\|WP_001838708.1\|2544559_2544868_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_001066124.1\|2516975_2517737_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|181681
NZ_CP044106.1\|WP_000074020.1\|2522956_2523721_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP044106.1\|WP_150344405.1\|2526248_2527607_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NZ_CP044106.1\|WP_000678764.1\|2545011_2545278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000946334.1\|2544218_2544452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000990133.1\|2523874_2524555_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP044106.1\|WP_001117054.1\|2521452_2521869_+\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP044106.1\|WP_000966103.1\|2543049_2544225_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP044106.1\|WP_000721337.1\|2534978_2535845_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP044106.1\|WP_000841440.1\|2531927_2534792_+\|fibronectin-binding-protein-FnbB	unknown	unknown	gnl\|CDD\|371043
NZ_CP044106.1\|WP_078065154.1\|2527647_2527833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000777467.1\|2517729_2519022_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_014363480.1\|2519490_2521314_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	6.05001e-87
NZ_CP044106.1\|WP_000289136.1\|2522099_2522792_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	8.50652e-86
NZ_CP044106.1\|WP_000356869.1\|2545561_2547199_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP044106.1\|WP_112380509.1\|2537784_2542668_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|375909	pfam18483, Bact_lectin, Bacterial lectin. This entry primarily matches to legume-like lectin domains found in prokaryotes.	2.04002e-17
NZ_CP044106.1\|WP_000998872.1\|2537122_2537479_+\|HTH-type-transcriptional-regulator-SarT	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	4.06037e-28
NZ_CP044106.1\|WP_000876641.1\|2524578_2526132_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP044106.1\|WP_000386370.1\|2536055_2536799_-\|HTH-type-transcriptional-regulator-SarU	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	9.129e-26
NZ_CP044106.1\|WP_001066124.1\|2516975_2517737_-\|ATP-binding-protein	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	8.44204e-69
NZ_CP044106.1\|WP_000074020.1\|2522956_2523721_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	3.35836e-32
NZ_CP044106.1\|WP_150344405.1\|2526248_2527607_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.03997e-167
NZ_CP044106.1\|WP_000990133.1\|2523874_2524555_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.91306e-44
NZ_CP044106.1\|WP_001117054.1\|2521452_2521869_+\|DUF2188-domain-containing-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	1.61793e-62
NZ_CP044106.1\|WP_000966103.1\|2543049_2544225_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.53775e-56
NZ_CP044106.1\|WP_000721337.1\|2534978_2535845_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	5.5142e-177
NZ_CP044106.1\|WP_000841440.1\|2531927_2534792_+\|fibronectin-binding-protein-FnbB	gnl\|CDD\|371043	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin. This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.	7.13466e-32
NZ_CP044106.1\|WP_000777467.1\|2517729_2519022_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.07621e-28

>NZ_CP044106.1|WP_078065154.1|2527647_2527833_+|hypothetical-protein
MASKHVYFYAENRLKYLESERYKKYIGYFSVMKGVSRHIFVRIVQAIIMKRLVYCFKLDND
>NZ_CP044106.1|WP_150344405.1|2526248_2527607_+|gluconate-permease
MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALMLGIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHVQWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKIAQKMIPSAYTREGDISALGAQKEFKDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTAGTAMLIAVLFVIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGGVGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV
>NZ_CP044106.1|WP_000876641.1|2524578_2526132_+|gluconokinase
MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTAKFADIKTYIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTAYVMKGMKERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIKENVAVYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
>NZ_CP044106.1|WP_000990133.1|2523874_2524555_+|GntR-family-transcriptional-regulator
MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
>NZ_CP044106.1|WP_000074020.1|2522956_2523721_+|MerR-family-transcriptional-regulator
MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLYKIKNVQYYVNETSTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHMSTEQLEISHIQHNN
>NZ_CP044106.1|WP_000289136.1|2522099_2522792_+|GTP-pyrophosphokinase-family-protein
MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHIYSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAKEHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSIPVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNNAETEKYRDLLKECATEITEVEDKLQQIHSEITE
>NZ_CP044106.1|WP_001117054.1|2521452_2521869_+|DUF2188-domain-containing-protein
MPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYLEKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
>NZ_CP044106.1|WP_014363480.1|2519490_2521314_+|FUSC-family-protein
MIIPAIIGYLFGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLITKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELNAKQIRPLPDELIEMMDHIIAQLDNSDENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFNFEKAYWIPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDKTLIQNYYPSLFALEEIIFMLNRAMANEDRLTINEQLMGEYLATFENIAKHLELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV
>NZ_CP044106.1|WP_000777467.1|2517729_2519022_-|IS21-family-transposase
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMDVDRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLSDTSEQKFYYKRILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKGYQRMSPKGTTRFETKAGHQAQFDWKEGINFKTKDNQIVSLNIGVLLLPYSRFVIMQVTMNKSSDVLFNLLTQAFELMGGVPNELVTDNMKTVMDQPRTERTNGQINRRFKQFADDFNFKVKPCIAGRPRTKGKVESIMKILDEIHAYQGELYLEEIPKFISNLNERLNYSVHTSTGKIPIIALEKEKSFLQPLPNVNVRNSYKVKHKYLKVNHSNMITYKSNQYSVPAEYCGKIVEVQVYDQKLHVYYNTKSICEHLITQRKLNYQKEHYLETLSSSFGNREMDDINQIAIDNLNAIGELYDE
>NZ_CP044106.1|WP_001066124.1|2516975_2517737_-|ATP-binding-protein
MNNSTNYKRLKANLEYLKMNQMINHLDDVIDFSIKNNLSFIDTLIKLSDYEIEIKEKNLIESMVKVAAFPFKKEISDFDFNFQPSINQQEIWDFTDLRFIEKYQNIVFLGSSGVGKTHLATGIGMAAAKNRVSTYFIKCHHLIENLRKAKLENRLENRLKHYSKYKLLIIDEIGYLPIGSEDAKLFFQLIDLRYEKKSTIFTTNINFNLWNEIFDDPKIANAILDRILHHSSVVKITGKSYRLKDHSPKKEIT
>NZ_CP044106.1|WP_000841440.1|2531927_2534792_+|fibronectin-binding-protein-FnbB
MKSNLRYGIRKHKLGASSVFLGTMIVVGMGQENEAAASEQNNTTVEESGSSATERKASETQTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPTTVQAPKVETSRVDLPSEKVADKETTGTQVDTAQPSNASEIKPRMKRSTDVAAVAEKEVVGEAKTTGSDVTSKVTVENGSEIVGHNNKETNVVNPHNAERVTLKYKWKFGEDIKPGDYFDFTLSNNVETHGISTLRKVPEIKSTDGQVMAVGEVNEERKIRYTFKEYVQGKKDLKAELDLNLFIDPTTVTKRGNQNIEVTLGEKKISKQFDIKYLDGVKDNWGVTVNGRIHTLNKQEGRFSHFAYVKPNNQSLSSVTVSGQVTKGNKSGASNPTVKVYKHIGSDELAESVYGDILDETKFEDVTDKLSLTLTGNGGYTLDFSELDKTKNYVIKYEGDYDSSASDLNFQTKLSGYHNYYYSYYPVQLTWNNGVAFYSNKAQGDGKDKPNDPIIDKSEPIELDIKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEGAEGHAEGIVETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDEDSTKGIVTGAVSDHTTVEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVIEEIEENTHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQGGNIIDIDFDSVPHIHGFNKHNEIIEEDTNKDKPNYQFGGHNSVDFEEDTLPKVSGQNEGQQTIEEDTTSPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPTEPGKPVSPTKEEPKKPSKPVEQGKVVTPVIEINEKVKVVAPTKQKQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRRNKKNNKA
>NZ_CP044106.1|WP_000721337.1|2534978_2535845_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKELGL
>NZ_CP044106.1|WP_000386370.1|2536055_2536799_-|HTH-type-transcriptional-regulator-SarU
MDYQTFEKVNKLINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNETDERRIFVSVTPMQRKKIACIINELDKIIKGFNKDRDYIKFQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFIDLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQDNTIKSIFTDTSKILKPRKFFF
>NZ_CP044106.1|WP_000998872.1|2537122_2537479_+|HTH-type-transcriptional-regulator-SarT
MNDLKSKSNIKLMKRVLTTYELRKYLKKYFCLTLDNYLVLAYLDVFKNDEGKYFMRDIISYIGIDQSRIVKSVKELSKKGYLNKCRDPHDSRNVIIVVSVKQHNYIKNLLSEININET
>NZ_CP044106.1|WP_112380509.1|2537784_2542668_+|YSIRK-type-signal-peptide-containing-protein
MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGIEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKEVANVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQSNPEDLKVSEVTRFNNKSIGRNELTGALQLKNKVSFKNDFEFNIRIANNHQSVTTGADGWGFLFSKGDGNEYLQKGGILGPKGMENSAGFKIDTGYNFKDPMDKEEKQAGQGFKGYGTFVKTGADGTTAKVGTNIPTRGKADNSFQYADNSIDTTDGKFHGQLLNNLKLAYNEKSGIMRAEYAGKIWEANISDLGLDKSEAYNFLITSSQRQGTSQGVYANGWMRTDLNNSTFKLTPNLVNKTETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIRHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIRHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPEKPEKPSRPTHPSGPVNPDNPGLSKDRAKPNDPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGVESTQKGLIFSSIIGIAGLILLARRRKN
>NZ_CP044106.1|WP_000966103.1|2543049_2544225_+|MFS-transporter
MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQSSLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKKILYLSDLILSLIIIIIPLLAITSNLNYLTLLTISTAITIINCYTDPAFRAILPEIIEEEHLATSNALIDSLQRGSNIILPALIGVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKKEFSETWEFLKQSKEIPFIIIIQFACIMINTGLWRVALPLFISNILKEDVGVYGLATSCLGIASLLMSLIMGLLSEKRLIFKFSIGVLVWGIGLSIINVFPSMAILYIGATLVGLGQSIEGLTRSVAIQIKTPNHLMGKVFSISSTSNYAADTLSLGLISLIIPLLSLSNIFISGGAIISMLSWVKVC
>NZ_CP044106.1|WP_000946334.1|2544218_2544452_+|hypothetical-protein
MLRSLCKHNRILINAIKVGIEMKYKISLAYNLAIIIGSLIILCILISRGYDIYVILIPILTILASLINLICDIKKHK
>NZ_CP044106.1|WP_001838708.1|2544559_2544868_-|hypothetical-protein
MTVNIIVSIVFCISIVIIGIYVAITKDFTLISFINQTTIADKHKNQIAYIFTLCISLSAVFLMSSILSFEYDFIALAFLFLTIALFLIALFYVCLYKITKYP
>NZ_CP044106.1|WP_000678764.1|2545011_2545278_-|hypothetical-protein
MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAHTLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD
>NZ_CP044106.1|WP_000356869.1|2545561_2547199_-|phospho-sugar-mutase
MDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELVSRYIEDVGNPLQIDISFSKHNSSYIKPLPKSVTENYIKHVQNMIGYIPKSDLQVVFTSLHGTSVPIVPKLLKSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS

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Crispr_ID: NZ_CP044106_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_11

2534232-2534364

Orphan

Consensus_repeat	Method
ATTGAAGAAGATACAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP044106_11

>merge|NZ_CP044106|11|2534232-2534364|PILER-CR
ATTGAAGAAGATACAAACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGATTTTGAAGAAGATACACTTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAACGATTGAAGAAGATACAA

>NZ_CP044106|11|2|2534232-2534364|PILER-CR
ATTGAAGAAGATACAA	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGAT
TTTGAAGAAGATACAC	TTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAACG
ATTGAAGAAGATACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_014363480.1\|2519490_2521314_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP044106.1\|WP_000289136.1\|2522099_2522792_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP044106.1\|WP_000356869.1\|2545561_2547199_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP044106.1\|WP_112380509.1\|2537784_2542668_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|375909
NZ_CP044106.1\|WP_000998872.1\|2537122_2537479_+\|HTH-type-transcriptional-regulator-SarT	unknown	unknown	gnl\|CDD\|130944
NZ_CP044106.1\|WP_000876641.1\|2524578_2526132_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP044106.1\|WP_000386370.1\|2536055_2536799_-\|HTH-type-transcriptional-regulator-SarU	unknown	unknown	gnl\|CDD\|130944
NZ_CP044106.1\|WP_001838708.1\|2544559_2544868_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000074020.1\|2522956_2523721_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP044106.1\|WP_038412676.1\|2528075_2531246_+\|fibronectin-binding-protein-FnbA	unknown	unknown	gnl\|CDD\|371043
NZ_CP044106.1\|WP_000946334.1\|2544218_2544452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000755953.1\|2547485_2547878_+\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|239517
NZ_CP044106.1\|WP_000990133.1\|2523874_2524555_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP044106.1\|WP_001117054.1\|2521452_2521869_+\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP044106.1\|WP_000966103.1\|2543049_2544225_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP044106.1\|WP_000721337.1\|2534978_2535845_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP044106.1\|WP_150344405.1\|2526248_2527607_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NZ_CP044106.1\|WP_000678764.1\|2545011_2545278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_078065154.1\|2527647_2527833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000777467.1\|2517729_2519022_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_014363480.1\|2519490_2521314_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	6.05001e-87
NZ_CP044106.1\|WP_000289136.1\|2522099_2522792_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	8.50652e-86
NZ_CP044106.1\|WP_000356869.1\|2545561_2547199_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP044106.1\|WP_112380509.1\|2537784_2542668_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|375909	pfam18483, Bact_lectin, Bacterial lectin. This entry primarily matches to legume-like lectin domains found in prokaryotes.	2.04002e-17
NZ_CP044106.1\|WP_000998872.1\|2537122_2537479_+\|HTH-type-transcriptional-regulator-SarT	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	4.06037e-28
NZ_CP044106.1\|WP_000876641.1\|2524578_2526132_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP044106.1\|WP_000386370.1\|2536055_2536799_-\|HTH-type-transcriptional-regulator-SarU	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	9.129e-26
NZ_CP044106.1\|WP_000074020.1\|2522956_2523721_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	3.35836e-32
NZ_CP044106.1\|WP_038412676.1\|2528075_2531246_+\|fibronectin-binding-protein-FnbA	gnl\|CDD\|371043	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin. This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.	7.63196e-29
NZ_CP044106.1\|WP_000755953.1\|2547485_2547878_+\|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	1.00523e-55
NZ_CP044106.1\|WP_000990133.1\|2523874_2524555_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.91306e-44
NZ_CP044106.1\|WP_001117054.1\|2521452_2521869_+\|DUF2188-domain-containing-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	1.61793e-62
NZ_CP044106.1\|WP_000966103.1\|2543049_2544225_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.53775e-56
NZ_CP044106.1\|WP_000721337.1\|2534978_2535845_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	5.5142e-177
NZ_CP044106.1\|WP_150344405.1\|2526248_2527607_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.03997e-167
NZ_CP044106.1\|WP_000777467.1\|2517729_2519022_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	5.07621e-28

>NZ_CP044106.1|WP_038412676.1|2528075_2531246_+|fibronectin-binding-protein-FnbA
MKNNLRYGIRKHKLGAASVFLGTMIVVGMGQDKEAAASEQKTTTVEENGNSATDNKVSETQTTATNVNHIEETQSYNATVTEQPSNATQVTTQEVPKAVQAPLTAQPANVETVKEEVVKEEAKPQVKETTQPQDNSGDQRQVDLTPKKATQNQAAETQVEVAQPRTASESKPRVTRSADVVDASDAKVETGTDVTSKVTVEDESKIEAPKGNNVQPHEGQRVVLKYKLKFQDGLKTGDYFDFTLSNNVNTHGVSTTRKVPDIKNGSLVMAKGQVLDNGRIRYTFIDYIKDKVNVTANLEINLFIDPKTVQSNGQQTITSKLNGKETSGTMQITYKDGVKNHYTNVNGSIETFDKEKNKFTHVAYIKPINGNNSDSVTVTGMLTQGSNENGTQPNVKIYEYVGTENGLPQSVYANTVDSTQLKDVTNQMSDKLKVQNNGSYSLNFDKLDKTYVIHYTGDYLNGTSEVNFRTQLTGYPENHYKTYYYYNHGYTLTWDNGLVLYSNKANGDGKYGPIVDSNNFEFSEDSGNGSISGQYDEKQIIETEENQDNTPLDIDYHTAIDGEGGYVDGYIETIEETDSSAIDIDYHTAVDSEAGHVGGYTESSEESNPIDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDEESTKGIVTGAVTDHTTVEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVVEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNNGNQSFEEDTEKDKPKYEQGGNIIDIDFDSVPHIHGFNKHNEIIEEDTNKDKPNYQFGGHNSVDFEEDTLPKVSGQNEGQQTIEEDTTPPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPTPEVPSEPGTPVPPTPEVPAEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPTKQKQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRRNKKNNKA
>NZ_CP044106.1|WP_078065154.1|2527647_2527833_+|hypothetical-protein
MASKHVYFYAENRLKYLESERYKKYIGYFSVMKGVSRHIFVRIVQAIIMKRLVYCFKLDND
>NZ_CP044106.1|WP_150344405.1|2526248_2527607_+|gluconate-permease
MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALMLGIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHVQWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKIAQKMIPSAYTREGDISALGAQKEFKDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTAGTAMLIAVLFVIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGGVGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV
>NZ_CP044106.1|WP_000876641.1|2524578_2526132_+|gluconokinase
MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYIMRESKVNQDDIKFVSFSAQMHSLIAMDQQHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLAKIFWMKHEWQDVFQRTAKFADIKTYIFYHLFDRYIIDYSMASATGMFNLETLDWDVGALELLGISEEMLPELVPTAYVMKGMKERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPIKENVAVYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
>NZ_CP044106.1|WP_000990133.1|2523874_2524555_+|GntR-family-transcriptional-regulator
MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
>NZ_CP044106.1|WP_000074020.1|2522956_2523721_+|MerR-family-transcriptional-regulator
MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLYKIKNVQYYVNETSTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMIGYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHMSTEQLEISHIQHNN
>NZ_CP044106.1|WP_000289136.1|2522099_2522792_+|GTP-pyrophosphokinase-family-protein
MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHIYSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAKEHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSIPVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNNAETEKYRDLLKECATEITEVEDKLQQIHSEITE
>NZ_CP044106.1|WP_001117054.1|2521452_2521869_+|DUF2188-domain-containing-protein
MPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYLEKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
>NZ_CP044106.1|WP_014363480.1|2519490_2521314_+|FUSC-family-protein
MIIPAIIGYLFGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLITKLLHTYNDKSAFLQVAKTAVDSFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELNAKQIRPLPDELIEMMDHIIAQLDNSDENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFNFEKAYWIPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDKTLIQNYYPSLFALEEIIFMLNRAMANEDRLTINEQLMGEYLATFENIAKHLELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV
>NZ_CP044106.1|WP_000777467.1|2517729_2519022_-|IS21-family-transposase
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMDVDRRTVDKYLNGFEPTKKRNRQSIIDKYYPIIEKLLSDTSEQKFYYKRILWQYLKDKHGLTCAYSTFRAYILKHDEFNRYFMKGYQRMSPKGTTRFETKAGHQAQFDWKEGINFKTKDNQIVSLNIGVLLLPYSRFVIMQVTMNKSSDVLFNLLTQAFELMGGVPNELVTDNMKTVMDQPRTERTNGQINRRFKQFADDFNFKVKPCIAGRPRTKGKVESIMKILDEIHAYQGELYLEEIPKFISNLNERLNYSVHTSTGKIPIIALEKEKSFLQPLPNVNVRNSYKVKHKYLKVNHSNMITYKSNQYSVPAEYCGKIVEVQVYDQKLHVYYNTKSICEHLITQRKLNYQKEHYLETLSSSFGNREMDDINQIAIDNLNAIGELYDE
>NZ_CP044106.1|WP_000721337.1|2534978_2535845_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKELGL
>NZ_CP044106.1|WP_000386370.1|2536055_2536799_-|HTH-type-transcriptional-regulator-SarU
MDYQTFEKVNKLINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNETDERRIFVSVTPMQRKKIACIINELDKIIKGFNKDRDYIKFQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFIDLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQDNTIKSIFTDTSKILKPRKFFF
>NZ_CP044106.1|WP_000998872.1|2537122_2537479_+|HTH-type-transcriptional-regulator-SarT
MNDLKSKSNIKLMKRVLTTYELRKYLKKYFCLTLDNYLVLAYLDVFKNDEGKYFMRDIISYIGIDQSRIVKSVKELSKKGYLNKCRDPHDSRNVIIVVSVKQHNYIKNLLSEININET
>NZ_CP044106.1|WP_112380509.1|2537784_2542668_+|YSIRK-type-signal-peptide-containing-protein
MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGIEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKEVANVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQSNPEDLKVSEVTRFNNKSIGRNELTGALQLKNKVSFKNDFEFNIRIANNHQSVTTGADGWGFLFSKGDGNEYLQKGGILGPKGMENSAGFKIDTGYNFKDPMDKEEKQAGQGFKGYGTFVKTGADGTTAKVGTNIPTRGKADNSFQYADNSIDTTDGKFHGQLLNNLKLAYNEKSGIMRAEYAGKIWEANISDLGLDKSEAYNFLITSSQRQGTSQGVYANGWMRTDLNNSTFKLTPNLVNKTETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIRHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIRHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPEKPEKPSRPTHPSGPVNPDNPGLSKDRAKPNDPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGVESTQKGLIFSSIIGIAGLILLARRRKN
>NZ_CP044106.1|WP_000966103.1|2543049_2544225_+|MFS-transporter
MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQSSLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKKILYLSDLILSLIIIIIPLLAITSNLNYLTLLTISTAITIINCYTDPAFRAILPEIIEEEHLATSNALIDSLQRGSNIILPALIGVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKKEFSETWEFLKQSKEIPFIIIIQFACIMINTGLWRVALPLFISNILKEDVGVYGLATSCLGIASLLMSLIMGLLSEKRLIFKFSIGVLVWGIGLSIINVFPSMAILYIGATLVGLGQSIEGLTRSVAIQIKTPNHLMGKVFSISSTSNYAADTLSLGLISLIIPLLSLSNIFISGGAIISMLSWVKVC
>NZ_CP044106.1|WP_000946334.1|2544218_2544452_+|hypothetical-protein
MLRSLCKHNRILINAIKVGIEMKYKISLAYNLAIIIGSLIILCILISRGYDIYVILIPILTILASLINLICDIKKHK
>NZ_CP044106.1|WP_001838708.1|2544559_2544868_-|hypothetical-protein
MTVNIIVSIVFCISIVIIGIYVAITKDFTLISFINQTTIADKHKNQIAYIFTLCISLSAVFLMSSILSFEYDFIALAFLFLTIALFLIALFYVCLYKITKYP
>NZ_CP044106.1|WP_000678764.1|2545011_2545278_-|hypothetical-protein
MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAHTLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD
>NZ_CP044106.1|WP_000356869.1|2545561_2547199_-|phospho-sugar-mutase
MDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELVSRYIEDVGNPLQIDISFSKHNSSYIKPLPKSVTENYIKHVQNMIGYIPKSDLQVVFTSLHGTSVPIVPKLLKSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYQLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS
>NZ_CP044106.1|WP_000755953.1|2547485_2547878_+|(deoxy)nucleoside-triphosphate-pyrophosphohydrolase
MKKVINVVGAIIFSDNKILCAQRSEKMSLPLMWEFPGGKVEKNETEKDALIREIREEMKCDLIVGDKVITTEHEYDFGIVKLTTYKCNLNKELPTLIEHKSIEWLPINELDKLNWAPADIPAVNKIMTEG

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Crispr_ID: NZ_CP044106_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_12

2627061-2627153

Orphan

Consensus_repeat	Method
CTTTCTAACAAATAAATTTGAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_12

>merge|NZ_CP044106|12|2627061-2627153|CRISPRCasFinder
CTTTCTAACAAATAAATTTGAAGAAGACAAAGGAACGTAGTAGGACGTAAAACGTCAACTGCATAAGCCTTTCTAACAAATAAATTTGAAGAA

>NZ_CP044106|12|10|2627061-2627153|CRISPRCasFinder
CTTTCTAACAAATAAATTTGAAGAA	GACAAAGGAACGTAGTAGGACGTAAAACGTCAACTGCATAAGC
CTTTCTAACAAATAAATTTGAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000200957.1\|2620921_2621389_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377623
NZ_CP044106.1\|WP_000479576.1\|2631992_2632712_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP044106.1\|WP_000019124.1\|2627362_2628229_+\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP044106.1\|WP_014532694.1\|2626760_2626856_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000792557.1\|2625355_2626666_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|288473
NZ_CP044106.1\|WP_001046638.1\|2618107_2619115_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|235755
NZ_CP044106.1\|WP_000971541.1\|2619092_2620208_+\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223234
NZ_CP044106.1\|WP_000825921.1\|2631232_2632012_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270429
NZ_CP044106.1\|WP_000783428.1\|2621440_2622418_-\|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B	unknown	unknown	gnl\|CDD\|273388
NZ_CP044106.1\|WP_000615464.1\|2632708_2633440_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP044106.1\|WP_000162810.1\|2635422_2636022_+\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|224565
NZ_CP044106.1\|WP_000819839.1\|2635041_2635404_+\|DUF4467-domain-containing-protein	unknown	unknown	gnl\|CDD\|291399
NZ_CP044106.1\|WP_001125208.1\|2628554_2629241_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184518
NZ_CP044106.1\|WP_071665646.1\|2624998_2625181_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000286874.1\|2620218_2620911_+\|6-carboxyhexanoate--CoA-ligase	unknown	unknown	gnl\|CDD\|224342
NZ_CP044106.1\|WP_031845052.1\|2623934_2624864_-\|bi-component-gamma-hemolysin-HlgAB-subunit-A	unknown	unknown	gnl\|CDD\|369625
NZ_CP044106.1\|WP_001012236.1\|2633536_2634787_-\|FemA/FemB-family-glycyltransferase-FmhA	unknown	unknown	gnl\|CDD\|367067
NZ_CP044106.1\|WP_000916705.1\|2622419_2623367_-\|bi-component-gamma-hemolysin-HlgCB-subunit-C	unknown	unknown	gnl\|CDD\|369625
NZ_CP044106.1\|WP_000038954.1\|2629672_2631112_+\|multidrug-efflux-MFS-transporter-MdeA	unknown	unknown	gnl\|CDD\|129794
NZ_CP044106.1\|WP_000762708.1\|2629394_2629499_-\|putative-metal-homeostasis-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000200957.1\|2620921_2621389_+\|hypothetical-protein	gnl\|CDD\|377623	pfam06177, QueT, QueT transporter. This family includes the queT gene encoding a hypothetical integral membrane protein with 5 predicted transmembrane regions. The queT genes in Firmicutes are often preceded by the PreQ1 (7-aminomethyl-7-deazaguanine) riboswitches of two distinct classes, suggesting involvement of the QueT transporters in uptake of a queuosine biosynthetic intermediate.	0.00179425
NZ_CP044106.1\|WP_000479576.1\|2631992_2632712_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.98247e-78
NZ_CP044106.1\|WP_000019124.1\|2627362_2628229_+\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	6.59628e-89
NZ_CP044106.1\|WP_001012236.1\|2633536_2634787_-\|FemA/FemB-family-glycyltransferase-FmhA	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	0
NZ_CP044106.1\|WP_000792557.1\|2625355_2626666_-\|hypothetical-protein	gnl\|CDD\|288473	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI. This family of proteins represents Sbi domain IV which binds the central complement protein C3. Sbi-IV interacts with Sbi-III to induce a consumption of complement via alternative pathway activation. When not interacting with Sbi-III, Sbi-IV inhibits the alternative pathway without complement consumption. The structure of Sbi-IV consists of a three-helix bundle fold.	1.40953e-27
NZ_CP044106.1\|WP_000038954.1\|2629672_2631112_+\|multidrug-efflux-MFS-transporter-MdeA	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	7.87495e-92
NZ_CP044106.1\|WP_000971541.1\|2619092_2620208_+\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	gnl\|CDD\|223234	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism].	8.76662e-139
NZ_CP044106.1\|WP_000825921.1\|2631232_2632012_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270429	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold. This subgroup includes cystine-binding domain of periplasmic receptor-dependent ATP-binding cassette transporters from Neisseria gonorrhoeae and Bacillus subtilis and their related proteins. Cystine is an oxidized dimeric form of cysteine that is required for optimal bacterial growth. In Bacillus subtilis, three ABC transporters, TcyJKLMN (YtmJKLMN), TcyABC (YckKJI), and YxeMNO are involved in uptake of cystine. Likewise, three uptake systems were identified in Salmonella enterica serovar Typhimurium, while in Escherichia coli, two transport systems seem to be involved in cystine uptake. Moreover, L-cystine limitation was shown to prevent virulence of Neisseria gonorrhoeae; thus, its L-cystine solute receptor (Ngo0372) may be suited as target for an antimicrobial vaccine. The cystine receptor belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.11829e-100
NZ_CP044106.1\|WP_000783428.1\|2621440_2622418_-\|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	5.50766e-128
NZ_CP044106.1\|WP_000615464.1\|2632708_2633440_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.36888e-142
NZ_CP044106.1\|WP_000162810.1\|2635422_2636022_+\|DsbA-family-protein	gnl\|CDD\|224565	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones].	1.74649e-30
NZ_CP044106.1\|WP_000819839.1\|2635041_2635404_+\|DUF4467-domain-containing-protein	gnl\|CDD\|291399	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467). Large family of predicted lipoproteins from Gram-positive bacteria Experimentally determined structure shows a cystatitin-like fold, allowing us to classify this family in the NFT2 clan, despite lack of any detectable sequence similarity between members of this family and other families in this clan.	2.57351e-31
NZ_CP044106.1\|WP_001125208.1\|2628554_2629241_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184518	PRK14119, gpmA, phosphoglyceromutase; Provisional.	3.52864e-167
NZ_CP044106.1\|WP_001046638.1\|2618107_2619115_+\|biotin-synthase-BioB	gnl\|CDD\|235755	PRK06256, PRK06256, biotin synthase; Validated.	0
NZ_CP044106.1\|WP_000286874.1\|2620218_2620911_+\|6-carboxyhexanoate--CoA-ligase	gnl\|CDD\|224342	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism].	3.38132e-130
NZ_CP044106.1\|WP_031845052.1\|2623934_2624864_-\|bi-component-gamma-hemolysin-HlgAB-subunit-A	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	1.31528e-96
NZ_CP044106.1\|WP_000916705.1\|2622419_2623367_-\|bi-component-gamma-hemolysin-HlgCB-subunit-C	gnl\|CDD\|369625	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family.	8.96448e-91

>NZ_CP044106.1|WP_014532694.1|2626760_2626856_+|hypothetical-protein
MLTNRLTSVNYVKKRLIQNIQRILSKEVLYG
>NZ_CP044106.1|WP_000792557.1|2625355_2626666_-|hypothetical-protein
MKNKYISKLLVGAATITLATMISNGEAKASENTQQTSTKHQTTQNNYVTDQQKAFYQVLHLKGITEEQRNQYIKTLREHPERAQEVFSESLKDSKNPDRRVAQQNAFYNVLKNDNLTEQEKNNYIAQIKENPDRSQQVWVESVQSSKAKERQNIENADKAIKDFQDNKAPHDKSAAYEANSKLPKDLRDKNNRFVEKVSIEKAIVRHDERVKSANDAISKLNEKDSIENRRLAQREVNKAPMDVKEHLQKQLDALVAQKDAEKKVAPKVEAPQIQSPQIEKPKAESPKVEVPQIQSPKVEVPQSKLLGYYQSLKDSFNYGYKYLTDTYKSYKEKYDTAKYYTDKYFKYKGTIDKTVLSVFGNGYKSYIQPLKVEDQKNYVSKSYAQVRNYVTETLNTGKVLYAFYQNPNVVKAAITTAETAASIKNIFSSFTSFFK
>NZ_CP044106.1|WP_071665646.1|2624998_2625181_+|hypothetical-protein
MMFLHYVMFKRFIGRRRLYSYITMFCKSYSIKLSFNYGACSGRGIDCAIVCENLKLIKLR
>NZ_CP044106.1|WP_031845052.1|2623934_2624864_-|bi-component-gamma-hemolysin-HlgAB-subunit-A
MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFHSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK
>NZ_CP044106.1|WP_000916705.1|2622419_2623367_-|bi-component-gamma-hemolysin-HlgCB-subunit-C
MLKNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQNIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKNTNHIKSMRWPFQYNIGLKTNDKYVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSDLPPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRIHNAFVNRNYTVKYEVNWKTHEIKVKGQN
>NZ_CP044106.1|WP_000783428.1|2621440_2622418_-|bi-component-gamma-hemolysin-HlgAB/HlgCB-subunit-B
MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSKLYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQIRWNGFYWAGANYKNFKTRTFKSTYEIDWENHKVKLLDTKETENNK
>NZ_CP044106.1|WP_000200957.1|2620921_2621389_+|hypothetical-protein
MTSKDITQISVIAAILTILAVLKIPSIIPGLDFQLSAPVALLILAFFGIKKYFLGGLLSSVLLLIFGVFNPINVIISIIFRVIAIAVVYLLKINVLSLILASVLGSLISRLLLSIILNLPVWVVLLNAIPGVIFTLIVAIPLYLTLRKRMAVLLR
>NZ_CP044106.1|WP_000286874.1|2620218_2620911_+|6-carboxyhexanoate--CoA-ligase
MYSIKMRSSNQDVHISGAETICEFDKIEQTVQRFYNKGFFHENGQPDFLNIKIQKIMEPIQQIKALQIIEDDKANLQHLTQECGVTEQALNQGMTYIKNETVYTGAIILSAISGKRLDSFGQRGIRATHFSFEDINNKGDLNERVTDALAIASCINAHPYIKGELCVSDDLTYTTGYFASAKIGYHRLFDIKPVNTRYGGRIIFVDDRIDLNHYISFLESTPKQVVYETV
>NZ_CP044106.1|WP_000971541.1|2619092_2620208_+|pyridoxal-phosphate-dependent-aminotransferase-family-protein
MMFQEQIDLLQQKGLYRSLKSVGYIDRQYIEVENKRCTNYTSNDYLGLGQIAFDKDDFERFMRKYSYHLSSSRLISGSSTAYEEIETMLAGWLGYSACTILNSGYDANLALFNIFKNTNCVVFSDQENHASIIDGIKLSGLEKVIYKHLDIADLEKRLAECPNQNIQKIIISDSVFSTNGDVVDIGQLVSLKHKYNATLILDVSHSFGIENYSNYQGVDILTSSLSKACGAYGGVILSSNDVKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLINADDRRTKLNSLSKYFNQKLKALNVNYNSSNSPIKFIEFDDIEAAENIHQTLLKHHVFTSYLRYPTVTKPMLRISLSYFHTEQDVDRLFEILHQED
>NZ_CP044106.1|WP_001046638.1|2618107_2619115_+|biotin-synthase-BioB
MNLAKRILQGEQLTKETVLKIYEDTNIDTLDLLNEAYILRKHYFGKKVKLNMILNAKSGICPENCGYCGQSRDIKEKQRYALIPEEQIIDGAKVAHDNHIGTYCIVMSGRGPSDKEVDHISNTVRTIKSQHPQLKICACLGLTNDEQAKKLKSAGVDRYNHNINTSENYHDNVVTTHSYKDRTDTIELMKANNISPCSGVICGMGESNQDIVDMAFALKEMDADSIPINFLHPIKGTKFGSMDDLTPMKCLRIVALFRLINPTKEIRIAGGREVNLRSLQPLALKAANSIFVGDYLITGGQPNQLDYDMINDLGFEIDYDTCENKENKNDVSRAN
>NZ_CP044106.1|WP_000019124.1|2627362_2628229_+|cation-transporter
MSHNENLKLAQRGAYLSLIVYIILSIVKYVTGFVFNSAAVRADALNNMTDIIVSLAVIIGLKISIKPADRNHPYGHLKSENISSLLVSFVIMFVGIQVVIQNAPRLFKEDDVVPNAITIIVSLISGLIMLIVFAVNQSLAKRTKSSSLNSAAKDNLSDSLVSIGTAIGLIFTQIGFPIVDIILATLLGLLIVYTGFGIFKEAIFMLSDGFNETELEAYRNDILEVDEVQKVKSIKGRYHGSSVFIDVTIVVDANLSLVEAHQICDNVEHHLHKKGISSVYVHPEPDHL
>NZ_CP044106.1|WP_001125208.1|2628554_2629241_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL
>NZ_CP044106.1|WP_000762708.1|2629394_2629499_-|putative-metal-homeostasis-protein
MKLDLQTARRNLNSPNIKTRKRALKIIKQHKRAK
>NZ_CP044106.1|WP_000038954.1|2629672_2631112_+|multidrug-efflux-MFS-transporter-MdeA
MSKKQKLTMIITMLMGGFFGLLNETLLVTALPSIMKDFEISYTQVQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFLVGISIFFLGTLLGGLSPHFATLLVARIIQALGAGIMMPLMMTTILDVFQPHERGKYMGIFGLVIGLAPAIGPTLSGYLVEYFNWRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDFISVIFSVLGFGGLLYGTSSISEKGFDNPIVLVSMIGGIVLVALFVLRQYRLSTPLLNFAVFKNKQFTVGIIIMGVTMVSMIGSETILPIFVQNLLHRSALDSGLTLLPGAIVMAFMSMTSGALYEKFGPRKLALVGMAIVVITTAYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMTHTMNQLKPEMNAHGSSMTNTVQQIAGSIGTAALITILAHASKNFSPTMSDYNGMNKIDMMNQIKVDTMLHGYHAGFLFALLITVVSFFCSFMLQGKKKEVDSRQ
>NZ_CP044106.1|WP_000825921.1|2631232_2632012_+|transporter-substrate-binding-domain-containing-protein
MKRLLFVMIAFVFILAACGNNSSKDKEANKDSKTINVGTEGTYAPFSFHDKDGKLTGYDIDVIKAVAKEEGLKLKFNETSWDSMFAGLDAGRFDVIANQVGINPDREKKYKFSKPYTFSSAVLVIRENEKDIKDFDDVKGKKLAQTFTSNYGKLAKDKGADITKVDGFNQSMDLLLSKRVDGTFNDSLSYLDYKKQKPNAKIKAIKGNAEQSRSAFAFSKKADDETVQKFNDGLKKIEENGELAKIGKKWFGQDVSKSK
>NZ_CP044106.1|WP_000479576.1|2631992_2632712_+|amino-acid-ABC-transporter-permease
MFLNLNSEQQHALDAAKQAFGPMLEGLVKYSIPITLVTFVLGLIIALFTALMRISTSKILRSISRVYVSIIRGTPMIVQLFIIFYGIPELGRLLTNDADNQWTLAPVVAAIIGLSLNVGAYASEIIRGGIISIPKGQTEAAYSIGMTYGQTIQRIILPQAIRVSIPALGNTFLSLIKDTSLLGFILVAEMFRKAQEVASTTYEYLTIYVLVALMYWVVCFIISIIQGIYESYIERGYRS
>NZ_CP044106.1|WP_000615464.1|2632708_2633440_+|amino-acid-ABC-transporter-ATP-binding-protein
MIQLNNIHKSFNDVEVIKGIDLSVEQGEVVTLIGRSGSGKTTLLRMINALEIPTEGTVYVNGKTYTSKDKKSQIEVRKQSGMVFQSYNLFPHKTALENVMEGLITVKKLKKDEARGKSLELLEKVGLTLVKDQRPHALSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVNDVLKVIKDLANEGMTMVIVTHEMRFAKEVSNNIVFIHEGMIGEQGAPEEMFNRPKTEELRRFLNVINEE
>NZ_CP044106.1|WP_001012236.1|2633536_2634787_-|FemA/FemB-family-glycyltransferase-FmhA
MNFVTLTSDEFNAFTTKHFSHYTQSAIHYNHRVDLKGDVHLVGVKDDNGQVIAGCLLTEARTLKFFKYFYTHRGPVMDYTNQSLVAFFFKALTSYLKKQNCLYVLVDPYLIENLRNADGEIVKSYDNRAFVRTMDTLGYKHQGFPVGYDSMSQIRWLSVLDLKDKTEDQLLKEMDYQTRRNIKKTYDIGVKTKTLTIDETQTFFDLFHMAEEKHGFKFRELPYFEEMQKLYDDHAMLKLAYIDLNEYLKTLQLKQQQLTAELSGVEEALEENPNSKKNKTKRTQLEQQLNSNKRKIDNTIEQIEQDGAVLNLASALFIYNEHEVYYLSSGSNPKYNAYMGAYHLQWEMIKFAKAHHIDRYNFYGITGDFSESSEDYGVQQFKKGFNAHVEEYIGDFIKPIKPLLYKVQTYLNHKRR
>NZ_CP044106.1|WP_000819839.1|2635041_2635404_+|DUF4467-domain-containing-protein
MKRFVAMVLLLLVFISGCGNDKYVKEIDEAVKIQNQKQEQLAKKGNGDRVDHFERKDANIYVYDKDKIIILAYKPLSNDDEVHYYAYDFSDKRVSYKQDFDSRRYYQQHDADYHEENMTN
>NZ_CP044106.1|WP_000162810.1|2635422_2636022_+|DsbA-family-protein
MTKKLLTLFIVSMLILTACGKKESATTSSKNGKPLVVIYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFLGKDSIVGSRASHAVLMYAPKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKTTPTAFINGEKVEDPYDYESYEKLLKDKIK

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Crispr_ID: NZ_CP044106_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044106_13

2781394-2781478

Orphan

Consensus_repeat	Method
AAAGTCAGCTTACAATAATGTGCAAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044106_13

>merge|NZ_CP044106|13|2781394-2781478|CRISPRCasFinder
AAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACACAGAAGCTGACAAAAGTCAGCATACAATAATGTGCAAGTTGG

>NZ_CP044106|13|11|2781394-2781478|CRISPRCasFinder
AAAGTCAGCTTACAATAATGTGCAAGTTGG	CGGGGCCCCAACACAGAAGCTGACA
AAAGTCAGCATACAATAATGTGCAAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044106.1\|WP_000503820.1\|2776062_2776569_+\|molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl\|CDD\|223595
NZ_CP044106.1\|WP_000066898.1\|2781852_2782203_+\|HTH-type-transcriptional-regulator-SarV	unknown	unknown	gnl\|CDD\|130944
NZ_CP044106.1\|WP_000051210.1\|2790805_2790970_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000413855.1\|2785507_2786773_+\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_CP044106.1\|WP_000076924.1\|2775027_2776032_+\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|181084
NZ_CP044106.1\|WP_000600972.1\|2784111_2784876_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP044106.1\|WP_000134534.1\|2776570_2777065_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP044106.1\|WP_000259720.1\|2777127_2778387_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP044106.1\|WP_000913006.1\|2774253_2774859_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226628
NZ_CP044106.1\|WP_001824308.1\|2780193_2781216_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP044106.1\|WP_000184412.1\|2782304_2783516_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP044106.1\|WP_000602934.1\|2778383_2778869_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|224677
NZ_CP044106.1\|WP_000643988.1\|2779574_2780174_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP044106.1\|WP_001161085.1\|2790243_2790561_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_000866974.1\|2779334_2779568_+\|molybdopterin-converting-factor-subunit-1	unknown	unknown	gnl\|CDD\|340452
NZ_CP044106.1\|WP_000808500.1\|2778882_2779329_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP044106.1\|WP_000592327.1\|2786889_2790057_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP044106.1\|WP_000951066.1\|2783508_2783949_-\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP044106.1\|WP_031844963.1\|2784867_2785119_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP044106.1\|WP_031844964.1\|2781556_2781727_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP044106.1\|WP_000503820.1\|2776062_2776569_+\|molybdenum-cofactor-biosynthesis-protein-MoaB	gnl\|CDD\|223595	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism].	9.7838e-65
NZ_CP044106.1\|WP_000600972.1\|2784111_2784876_+\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	2.21672e-37
NZ_CP044106.1\|WP_000076924.1\|2775027_2776032_+\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	1.97231e-131
NZ_CP044106.1\|WP_000259720.1\|2777127_2778387_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	6.25944e-158
NZ_CP044106.1\|WP_000134534.1\|2776570_2777065_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	2.70933e-97
NZ_CP044106.1\|WP_000866974.1\|2779334_2779568_+\|molybdopterin-converting-factor-subunit-1	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	1.33137e-25
NZ_CP044106.1\|WP_000913006.1\|2774253_2774859_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	1.03488e-114
NZ_CP044106.1\|WP_001824308.1\|2780193_2781216_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.93513e-164
NZ_CP044106.1\|WP_000184412.1\|2782304_2783516_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.14251e-72
NZ_CP044106.1\|WP_000602934.1\|2778383_2778869_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|224677	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism].	1.17898e-50
NZ_CP044106.1\|WP_000643988.1\|2779574_2780174_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.68918e-67
NZ_CP044106.1\|WP_000066898.1\|2781852_2782203_+\|HTH-type-transcriptional-regulator-SarV	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	6.89365e-20
NZ_CP044106.1\|WP_000808500.1\|2778882_2779329_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.56799e-58
NZ_CP044106.1\|WP_000592327.1\|2786889_2790057_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP044106.1\|WP_000951066.1\|2783508_2783949_-\|winged-helix-DNA-binding-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.06862e-14
NZ_CP044106.1\|WP_000413855.1\|2785507_2786773_+\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	8.95714e-143

>NZ_CP044106.1|WP_001824308.1|2780193_2781216_+|GTP-3',8-cyclase-MoaA
MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLNVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEEHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG
>NZ_CP044106.1|WP_000643988.1|2779574_2780174_+|molybdenum-cofactor-guanylyltransferase-MobA
MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNEIIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMITGKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFKNVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL
>NZ_CP044106.1|WP_000866974.1|2779334_2779568_+|molybdopterin-converting-factor-subunit-1
MKVLYFAEIKDILQKAQEDIVLEQGLTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
>NZ_CP044106.1|WP_000808500.1|2778882_2779329_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE
>NZ_CP044106.1|WP_000602934.1|2778383_2778869_+|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDIQLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEGFKNADFEKVVVYRDEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQLT
>NZ_CP044106.1|WP_000259720.1|2777127_2778387_+|molybdopterin-molybdotransferase-MoeA
MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVRIMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALAEKLGLEVGIYKTQQDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKTVKAKVLFNKVAMRPGSVTTVAFADGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQIIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPGGSRGFKAGHTVDIILTESDAAEEELLL
>NZ_CP044106.1|WP_000134534.1|2776570_2777065_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIYKQISNNTNTKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDVHFSWDETNAPLYTLNIQTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQRQSGQ
>NZ_CP044106.1|WP_000503820.1|2776062_2776569_+|molybdenum-cofactor-biosynthesis-protein-MoaB
MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEIEGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
>NZ_CP044106.1|WP_000076924.1|2775027_2776032_+|molybdopterin-biosynthesis-protein-MoeB
MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGLVRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDYIAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKHRIPWIYGGVVQSTYTEAAFIPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITYGDIWEGSHYSFGFSKMQRSACTTCGDIPSYPYLNKNEQRYATLCGRDTVQYENASITHDILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
>NZ_CP044106.1|WP_000913006.1|2774253_2774859_+|ATP-binding-cassette-domain-containing-protein
MLKINLKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG
>NZ_CP044106.1|WP_031844964.1|2781556_2781727_-|hypothetical-protein
MFRFISFGQLVVYSTTFIPKKDILQLNDMECDINVKEPLKIYYVVILKSGIEMIFS
>NZ_CP044106.1|WP_000066898.1|2781852_2782203_+|HTH-type-transcriptional-regulator-SarV
MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSEMDERQVFYFYSTSQKKLLDKITKEIEVLSVTN
>NZ_CP044106.1|WP_000184412.1|2782304_2783516_-|MFS-transporter
MTNQGSLNKSPIFTKSFTINFFVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAINLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
>NZ_CP044106.1|WP_000951066.1|2783508_2783949_-|winged-helix-DNA-binding-protein
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKYQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>NZ_CP044106.1|WP_000600972.1|2784111_2784876_+|VOC-family-protein
MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIETVKNKLQSEQVEVVGPIQMERDTHKDGKAKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
>NZ_CP044106.1|WP_031844963.1|2784867_2785119_-|hypothetical-protein
MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILSIFFILIKSSRLNNTLTILSIVLAIIHMGILAHSTYVYLY
>NZ_CP044106.1|WP_000413855.1|2785507_2786773_+|lipid-II:glycine-glycyltransferase-FemX
MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKRK
>NZ_CP044106.1|WP_000592327.1|2786889_2790057_+|efflux-RND-transporter-permease-subunit
MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQNPVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSVQNASIVTVEYENNTDMDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQLIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGLFQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASPQQNSKASASNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQVAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLRNIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYRRLTDSEEQLKGGNLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAIAFSLLASLLVSITLVPALAATLFKKGVKRRNKQYQEGLGVVSTTYKKVLHWSLNHKWIVIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKYLKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKHPGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTYDQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWSEDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATMVSAKVTNKDVGGTTRQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLAPFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQGMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISSTLLTLVVVPVIYEILFTLKKRFTKR
>NZ_CP044106.1|WP_001161085.1|2790243_2790561_-|hypothetical-protein
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
>NZ_CP044106.1|WP_000051210.1|2790805_2790970_-|hypothetical-protein
MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP044106_7	7.1\|1470606\|32\|NZ_CP044106\|CRISPRCasFinder	1470606-1470637	32	NZ_CP044106.1	2747159-2747190	0	1.0
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	981893-981918	0	1.0
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	1118921-1118946	0	1.0
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	1671619-1671644	0	1.0
NZ_CP044106_3	3.1\|481071\|32\|NZ_CP044106\|CRISPRCasFinder	481071-481102	32	NZ_CP044106.1	1123123-1123154	1	0.969
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	981893-981922	1	0.967
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	2781368-2781397	1	0.967
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	1118917-1118946	1	0.967
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	1671615-1671644	1	0.967
NZ_CP044106_7	7.1\|1470606\|32\|NZ_CP044106\|CRISPRCasFinder	1470606-1470637	32	NZ_CP044106.1	981760-981791	1	0.969
NZ_CP044106_7	7.1\|1470606\|32\|NZ_CP044106\|CRISPRCasFinder	1470606-1470637	32	NZ_CP044106.1	981818-981849	1	0.969
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	61642-61667	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	236903-236928	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	1461569-1461594	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	421643-421668	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	1507506-1507531	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	1507562-1507587	1	0.962
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	2747092-2747117	1	0.962
NZ_CP044106_13	13.1\|2781424\|25\|NZ_CP044106\|CRISPRCasFinder	2781424-2781448	25	NZ_CP044106.1	392790-392814	1	0.96
NZ_CP044106_13	13.1\|2781424\|25\|NZ_CP044106\|CRISPRCasFinder	2781424-2781448	25	NZ_CP044106.1	2781368-2781392	1	0.96
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	236903-236932	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	392790-392819	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	1461569-1461598	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	421639-421668	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	586956-586985	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	1507502-1507531	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	1507558-1507587	2	0.933
NZ_CP044106_6	6.1\|1119031\|30\|NZ_CP044106\|CRISPRCasFinder	1119031-1119060	30	NZ_CP044106.1	2747088-2747117	2	0.933
NZ_CP044106_7	7.1\|1470606\|32\|NZ_CP044106\|CRISPRCasFinder	1470606-1470637	32	NZ_CP044106.1	2283816-2283847	2	0.938
NZ_CP044106_8	8.1\|1516991\|31\|NZ_CP044106\|CRISPRCasFinder	1516991-1517021	31	NZ_CP044106.1	1475954-1475984	2	0.935
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	140649-140674	2	0.923
NZ_CP044106_9	9.1\|2283890\|26\|NZ_CP044106\|CRISPRCasFinder	2283890-2283915	26	NZ_CP044106.1	140987-141012	2	0.923

1. spacer 7.1|1470606|32|NZ_CP044106|CRISPRCasFinder matches to position: 2747159-2747190, mismatch: 0, identity: 1.0

ggcaatgcgagttggggtgtgggccccaacac	CRISPR spacer
ggcaatgcgagttggggtgtgggccccaacac	Protospacer
********************************

2. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 981893-981918, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

3. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 1118921-1118946, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

4. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 1671619-1671644, mismatch: 0, identity: 1.0

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctggcgg	Protospacer
**************************

5. spacer 3.1|481071|32|NZ_CP044106|CRISPRCasFinder matches to position: 1123123-1123154, mismatch: 1, identity: 0.969

ctatgttgggtcccaccccaacttgcattgtt	CRISPR spacer
ctatgttggggcccaccccaacttgcattgtt	Protospacer
********** *********************

6. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 981893-981922, mismatch: 1, identity: 0.967

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctatgttggggccccg	Protospacer
*****.************************

7. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 2781368-2781397, mismatch: 1, identity: 0.967

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttctgtcagcttctatgttggggccccg	Protospacer
*******.**********************

8. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 1118917-1118946, mismatch: 1, identity: 0.967

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctatgttggggccccg	Protospacer
*****.************************

9. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 1671615-1671644, mismatch: 1, identity: 0.967

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctatgttggggccccg	Protospacer
*****.************************

10. spacer 7.1|1470606|32|NZ_CP044106|CRISPRCasFinder matches to position: 981760-981791, mismatch: 1, identity: 0.969

ggcaatgcgagttggggtgtgggccccaacac	CRISPR spacer
ggcaatgcaagttggggtgtgggccccaacac	Protospacer
********.***********************

11. spacer 7.1|1470606|32|NZ_CP044106|CRISPRCasFinder matches to position: 981818-981849, mismatch: 1, identity: 0.969

ggcaatgcgagttggggtgtgggccccaacac	CRISPR spacer
ggcaatgcaagttggggtgtgggccccaacac	Protospacer
********.***********************

12. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 61642-61667, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

13. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 236903-236928, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagaagctgtcgg	Protospacer
********************** ***

14. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 1461569-1461594, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

15. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 421643-421668, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacatagtagctggcgg	Protospacer
**************** *********

16. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 1507506-1507531, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

17. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 1507562-1507587, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

18. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 2747092-2747117, mismatch: 1, identity: 0.962

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacagaagctggcgg	Protospacer
*************.************

19. spacer 13.1|2781424|25|NZ_CP044106|CRISPRCasFinder matches to position: 392790-392814, mismatch: 1, identity: 0.96

cggggccccaacacagaagctgaca	CRISPR spacer
cggggccccaacatagaagctgaca	Protospacer
*************.***********

20. spacer 13.1|2781424|25|NZ_CP044106|CRISPRCasFinder matches to position: 2781368-2781392, mismatch: 1, identity: 0.96

cggggccccaacacagaagctgaca	CRISPR spacer
cggggccccaacatagaagctgaca	Protospacer
*************.***********

21. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 236903-236932, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgacagcttctatgttggggccccg	Protospacer
*****.* **********************

22. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 392790-392819, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttttgtcagcttctatgttggggccccg	Protospacer
****.**.**********************

23. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 1461569-1461598, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctgtgttggggccccg	Protospacer
*****.**********.*************

24. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 421639-421668, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagctactatgttggggccccg	Protospacer
*****.******* ****************

25. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 586956-586985, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
cttttcgccagcttctatgttggggccccg	Protospacer
****..************************

26. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 1507502-1507531, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctgtgttggggccccg	Protospacer
*****.**********.*************

27. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 1507558-1507587, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctgtgttggggccccg	Protospacer
*****.**********.*************

28. spacer 6.1|1119031|30|NZ_CP044106|CRISPRCasFinder matches to position: 2747088-2747117, mismatch: 2, identity: 0.933

ctttctgccagcttctatgttggggccccg	CRISPR spacer
ctttccgccagcttctgtgttggggccccg	Protospacer
*****.**********.*************

29. spacer 7.1|1470606|32|NZ_CP044106|CRISPRCasFinder matches to position: 2283816-2283847, mismatch: 2, identity: 0.938

ggcaatgcgagttggggtgtgggccccaacac	CRISPR spacer
ggcaatgcgagttggggtgagggccctaacac	Protospacer
******************* ******.*****

30. spacer 8.1|1516991|31|NZ_CP044106|CRISPRCasFinder matches to position: 1475954-1475984, mismatch: 2, identity: 0.935

cctgtagaaattggcgttccaatttctctgt	CRISPR spacer
cctgtagaaattggtgttccaatttctttgt	Protospacer
**************.************.***

31. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 140649-140674, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaacacaaaagctggcgg	Protospacer
*************.*.**********

32. spacer 9.1|2283890|26|NZ_CP044106|CRISPRCasFinder matches to position: 140987-141012, mismatch: 2, identity: 0.923

cggggccccaacatagaagctggcgg	CRISPR spacer
cggggccccaagacagaagctggcgg	Protospacer
*********** *.************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP044106_8	8.1\|1516991\|31\|NZ_CP044106\|CRISPRCasFinder	1516991-1517021	31	KC139649	Salmonella phage FSL SP-069 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, hypothetical proteins, deoxyuridine 5'-triphosphate nucleotidohydrolase, hypothetical proteins, NinH, head morphogenesis protein, hypothetical proteins, capsid related protein, hypothetical proteins, enolase-like protein, hypothetical proteins, tail fiber, hypothetical protein, putative endolysin, hypothetical proteins, and DNA polymerase genes, complete cds	9668-9698	7	0.774
NZ_CP044106_8	8.1\|1516991\|31\|NZ_CP044106\|CRISPRCasFinder	1516991-1517021	31	KC139636	Salmonella phage FSL SP-062 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, and hypothetical proteins genes, complete cds	9668-9698	7	0.774
NZ_CP044106_8	8.1\|1516991\|31\|NZ_CP044106\|CRISPRCasFinder	1516991-1517021	31	NC_025443	Salmonella phage 9NA, complete genome	7834-7864	7	0.774
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP024776	Bacillus thuringiensis LM1212 plasmid pLM8, complete sequence	3826-3857	9	0.719
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP009062	Borreliella afzelii K78 plasmid lp28-1, complete sequence	16532-16563	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP018749	Borreliella garinii strain CIP 103362 isolate 20047 plasmid lp28-7	15178-15209	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP028869	Borreliella garinii strain 20047 plasmid lp28-7, complete sequence	11910-11941	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP028878	Borreliella bavariensis PBi plasmid lp28-7, complete sequence	4741-4772	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP028879	Borreliella bavariensis PBi plasmid lp28-9, complete sequence	11876-11907	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_018987	Borrelia burgdorferi 297 plasmid 297_lp28-6, complete sequence	12713-12744	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_017412	Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence	17252-17283	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_017419	Borreliella burgdorferi N40 plasmid N40_lp28-2, complete sequence	17030-17061	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_017408	Borreliella burgdorferi JD1 plasmid JD1 lp28-6, complete sequence	14812-14843	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_015920	Borreliella bissettii DN127 plasmid lp56, complete sequence	16601-16632	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_011779	Borreliella burgdorferi ZS7 plasmid ZS7_lp28-2, complete sequence	16934-16965	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NC_001852	Borreliella burgdorferi B31 plasmid lp28-2, complete sequence	16891-16922	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP017219	Borreliella burgdorferi strain B331 plasmid B331_lp56, complete sequence	14876-14907	10	0.688
NZ_CP044106_2	2.1\|286541\|32\|NZ_CP044106\|CRISPRCasFinder	286541-286572	32	NZ_CP017215	Borreliella burgdorferi strain B331 plasmid B331_lp28_6, complete sequence	11994-12025	15	0.531

1. spacer 8.1|1516991|31|NZ_CP044106|CRISPRCasFinder matches to KC139649 (Salmonella phage FSL SP-069 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, hypothetical proteins, deoxyuridine 5'-triphosphate nucleotidohydrolase, hypothetical proteins, NinH, head morphogenesis protein, hypothetical proteins, capsid related protein, hypothetical proteins, enolase-like protein, hypothetical proteins, tail fiber, hypothetical protein, putative endolysin, hypothetical proteins, and DNA polymerase genes, complete cds) position: , mismatch: 7, identity: 0.774

cctgtagaaattggcgttccaatt-tctctgt	CRISPR spacer
gatgtagaaattggcgtaccaattaaagctg-	Protospacer
  *************** ******    ***

2. spacer 8.1|1516991|31|NZ_CP044106|CRISPRCasFinder matches to KC139636 (Salmonella phage FSL SP-062 hypothetical proteins, RdgC exonuclease, hypothetical proteins, TerL, and hypothetical proteins genes, complete cds) position: , mismatch: 7, identity: 0.774

cctgtagaaattggcgttccaatt-tctctgt	CRISPR spacer
gatgtagaaattggcgtaccaattaaagctg-	Protospacer
  *************** ******    ***

3. spacer 8.1|1516991|31|NZ_CP044106|CRISPRCasFinder matches to NC_025443 (Salmonella phage 9NA, complete genome) position: , mismatch: 7, identity: 0.774

cctgtagaaattggcgttccaatt-tctctgt	CRISPR spacer
gatgtagaaattggcgtaccaattaaagctg-	Protospacer
  *************** ******    ***

4. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP024776 (Bacillus thuringiensis LM1212 plasmid pLM8, complete sequence) position: , mismatch: 9, identity: 0.719

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
tcaaggatttcgaaaaaagaaatcctaatttg	Protospacer
* .**.*****************.***

5. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP009062 (Borreliella afzelii K78 plasmid lp28-1, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctatttcc	Protospacer
  .******** ****** ********.   .

6. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP018749 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid lp28-7) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctatttcc	Protospacer
  .******** ****** ********.   .

7. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP028869 (Borreliella garinii strain 20047 plasmid lp28-7, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctatttcc	Protospacer
  .******** ****** ********.   .

8. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP028878 (Borreliella bavariensis PBi plasmid lp28-7, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctatttcc	Protospacer
  .******** ****** ********.   .

9. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP028879 (Borreliella bavariensis PBi plasmid lp28-9, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctatttcc	Protospacer
  .******** ****** ********.   .

10. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_018987 (Borrelia burgdorferi 297 plasmid 297_lp28-6, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

11. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_017412 (Borreliella burgdorferi JD1 plasmid JD1 lp28-7, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

12. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_017419 (Borreliella burgdorferi N40 plasmid N40_lp28-2, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

13. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_017408 (Borreliella burgdorferi JD1 plasmid JD1 lp28-6, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

14. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_015920 (Borreliella bissettii DN127 plasmid lp56, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

15. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_011779 (Borreliella burgdorferi ZS7 plasmid ZS7_lp28-2, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

16. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NC_001852 (Borreliella burgdorferi B31 plasmid lp28-2, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

17. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP017219 (Borreliella burgdorferi strain B331 plasmid B331_lp56, complete sequence) position: , mismatch: 10, identity: 0.688

tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
acaagaatttctaaaaaacaaattctgttgcc	Protospacer
  .******** ****** *******.. * .

18. spacer 2.1|286541|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP017215 (Borreliella burgdorferi strain B331 plasmid B331_lp28_6, complete sequence) position: , mismatch: 15, identity: 0.531

---tagagaatttcgaaaaaagaaattctacaggt	CRISPR spacer
ggcaacagaatttgttttttagaaattcttgt---	Protospacer
    * *******       *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 37134

Staphylococcus_phage(87.23%)

holin,tail,capsid,head,portal,protease,terminase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001164629.1\|1681_1867_+	DUF3113 family protein	A0A2I6PEM8	Staphylococcus_phage	7.0e-27	100.0
WP_000113974.1\|1866_2268_+	PVL family protein	A0A2I6PEL5	Staphylococcus_phage	1.2e-68	100.0
WP_000022728.1\|2267_2525_+	DUF3310 domain-containing protein	A0A2I6PEN5	Staphylococcus_phage	2.6e-43	100.0
WP_031837453.1\|2527_2728_+	hypothetical protein	C5I650	Staphylococcus_phage	1.3e-29	97.0
WP_150344353.1\|2742_2985_+	hypothetical protein	A0A2I6PDB4	Staphylococcus_phage	1.8e-38	96.2
WP_150344354.1\|3025_3403_+	hypothetical protein	A0A2I6PDC0	Staphylococcus_phage	1.5e-68	100.0
WP_000983954.1\|3399_3594_+	hypothetical protein	A0A2I6PE33	Staphylococcus_phage	2.5e-27	100.0
WP_000982708.1\|3590_4040_+	hypothetical protein	A0A2I6PDH2	Staphylococcus_phage	9.3e-81	100.0
WP_150344355.1\|4036_4321_+	hypothetical protein	E9LT36	Staphylococcus_phage	1.0e-45	98.9
WP_061823638.1\|4313_4565_+	DUF1024 family protein	Q4ZBT3	Staphylococcus_virus	9.2e-38	96.4
WP_072473165.1\|4904_5432_+	dUTPase	B2ZYX2	Staphylococcus_phage	8.6e-94	97.7
WP_150344356.1\|5468_5714_+	hypothetical protein	A0A0H4ITX2	Staphylococcus_phage	7.6e-37	98.8
WP_000195791.1\|5710_5917_+	DUF1381 domain-containing protein	A0A0H4IPW6	Staphylococcus_phage	4.5e-30	100.0
WP_000595263.1\|5913_6066_+	transcriptional activator RinB	A0A2I6PEM5	Staphylococcus_phage	2.0e-19	100.0
WP_000265258.1\|6133_6334_+	DUF1514 family protein	A0A2I6PF41	Staphylococcus_phage	2.9e-26	100.0
WP_150344357.1\|6385_8833_+	hypothetical protein	Q4ZCG0	Staphylococcus_virus	0.0e+00	98.9
WP_031764095.1\|8935_9031_-	hypothetical protein	Q4ZCF8	Staphylococcus_virus	3.6e-11	100.0
WP_001794602.1\|9173_9464_+	VRR-NUC domain-containing protein	M1T308	Staphylococcus_phage	4.9e-51	100.0
WP_150344358.1\|9444_10812_+	DEAD/DEAH box helicase family protein	Q4ZCM9	Staphylococcus_virus	5.1e-263	99.6
WP_000513699.1\|10824_11262_+	transcriptional regulator	A0A2I6PDC2	Staphylococcus_phage	4.6e-77	100.0
WP_000160689.1\|11418_11733_+	HNH endonuclease	A0A2I6PDC4	Staphylococcus_phage	2.5e-56	100.0
WP_000778932.1\|11861_12167_+\|terminase	terminase	A0A2I6PE27	Staphylococcus_phage	2.9e-49	100.0
WP_150344359.1\|12156_13848_+\|terminase	terminase large subunit	A0A2I6PE44	Staphylococcus_phage	0.0e+00	99.8
WP_001100669.1\|13852_15091_+\|portal	phage portal protein	A0A2K9VBP0	Staphylococcus_phage	6.9e-235	100.0
WP_000061872.1\|15074_15848_+\|protease	Clp protease ClpP	M1TAZ4	Staphylococcus_phage	9.2e-137	100.0
WP_001142739.1\|15859_17023_+\|capsid	phage major capsid protein	A0A2I6PDD7	Staphylococcus_phage	9.4e-218	100.0
WP_000050973.1\|17091_17370_+\|head,tail	phage gp6-like head-tail connector protein	A0A2I6PEQ1	Staphylococcus_phage	2.1e-46	100.0
WP_000395501.1\|17381_17714_+	hypothetical protein	A0A2I6PDD6	Staphylococcus_phage	6.2e-58	100.0
WP_000110020.1\|17710_18112_+	hypothetical protein	A0A2I6PDD3	Staphylococcus_phage	6.2e-68	100.0
WP_001023802.1\|18112_18508_+	DUF3168 domain-containing protein	A0A2I6PDD8	Staphylococcus_phage	2.6e-66	100.0
WP_000807536.1\|18542_19184_+\|tail	tail protein	A0A2I6PEP6	Staphylococcus_phage	5.9e-121	100.0
WP_000169128.1\|19275_19731_+	Ig domain-containing protein	A0A2I6PF45	Staphylococcus_phage	1.3e-77	100.0
WP_000589165.1\|19788_20139_+	hypothetical protein	A0A2I6PDE6	Staphylococcus_phage	1.1e-55	100.0
WP_000438833.1\|20180_20339_+	hypothetical protein	A0A2I6PES8	Staphylococcus_phage	1.2e-19	100.0
WP_150344360.1\|20352_26553_+\|tail	phage tail tape measure protein	A0A1X9IGU9	Staphylococcus_phage	0.0e+00	99.7
WP_001190534.1\|26552_27377_+\|tail	phage tail family protein	I1W5Y8	Staphylococcus_phage	7.0e-159	100.0
WP_000384474.1\|27385_28969_+	peptidase	A0A2I6PEQ5	Staphylococcus_phage	9.3e-309	100.0
WP_031786856.1\|28968_29259_+	hypothetical protein	U5U457	Staphylococcus_phage	6.0e-49	99.0
WP_000429558.1\|29274_31185_+	minor structural protein	A0A2I6PEQ9	Staphylococcus_phage	0.0e+00	100.0
WP_086031893.1\|31184_32651_+\|plate	BppU family phage baseplate upper protein	A0A2I6PES7	Staphylococcus_phage	7.6e-273	99.8
WP_001166599.1\|32650_33040_+	DUF2977 domain-containing protein	A0A2I6PER1	Staphylococcus_phage	2.2e-62	100.0
WP_000916020.1\|33032_33197_+	XkdX family protein	A0A2I6PES4	Staphylococcus_phage	4.9e-24	100.0
WP_000466784.1\|33242_33542_+	DUF2951 domain-containing protein	A0A2I6PER2	Staphylococcus_phage	2.0e-31	100.0
WP_000339146.1\|33677_33980_+\|holin	phage holin	A0A2I6PET6	Staphylococcus_phage	7.0e-48	100.0
WP_000930258.1\|33991_35446_+	CHAP domain-containing protein	A0A0N6WMR3	Staphylococcus_phage	3.0e-290	100.0
WP_000971220.1\|36418_36874_+	hypothetical protein	B7T0L3	Staphylococcus_virus	2.7e-72	100.0
WP_150344361.1\|36945_37134_+	hypothetical protein	Q4ZCJ7	Staphylococcus_virus	6.3e-23	98.0

DBSCAN-SWA_2

41917 : 43480

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064128937.1\|41917_43480_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	9.3e-19	24.6

DBSCAN-SWA_3

53684 : 54653

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989086.1\|53684_54653_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.0e-15	29.1

DBSCAN-SWA_4

70780 : 71689

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167867.1\|70780_71689_+	arginase	A0A1V0SJM8	Klosneuvirus	3.2e-27	32.0

DBSCAN-SWA_5

88977 : 91797

Only_Syngen_Nebraska_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000334462.1\|88977_90783_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A0A1J0F994	Only_Syngen_Nebraska_virus	3.4e-97	38.9
WP_000908190.1\|91014_91797_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-08	29.5

DBSCAN-SWA_6

104399 : 108231

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000070865.1\|104399_104843_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	5.6e-38	53.7
WP_000160304.1\|104963_105674_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_001083340.1\|105987_106650_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001242304.1\|106929_108231_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	6.1e-133	58.9

DBSCAN-SWA_7

116168 : 117779

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159964.1\|116168_117779_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.1e-146	49.6

DBSCAN-SWA_8

125582 : 133332

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000273356.1\|125582_126182_+	thymidine kinase	G3MBK1	Bacillus_virus	6.2e-32	42.9
WP_000460244.1\|126182_127259_+	peptide chain release factor 1	NA	NA	NA	NA
WP_000248731.1\|127245_128082_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_078065152.1\|128114_129212_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	6.7e-40	35.3
WP_000697334.1\|129208_129628_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_000654180.1\|129734_130259_+	TIGR01440 family protein	NA	NA	NA	NA
WP_000120494.1\|130285_131524_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.2e-103	53.0
WP_000048712.1\|131551_132181_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_000723421.1\|132204_133332_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.0e-27	29.9

DBSCAN-SWA_9

144120 : 146705

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000777467.1\|144120_145413_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8
WP_001066124.1\|145405_146167_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
WP_000932694.1\|146309_146705_+	single-stranded DNA-binding protein	A0A1J0MFK5	Staphylococcus_phage	1.3e-14	38.5

DBSCAN-SWA_10

152879 : 153527

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001187610.1\|152879_153527_-	HD domain-containing protein	H2ED17	Moumouvirus	8.0e-09	27.0

DBSCAN-SWA_11

160727 : 162248

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178942.1\|160727_162248_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-58	33.9

DBSCAN-SWA_12

167919 : 169947

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000546592.1\|167919_169947_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.7e-25	23.4

DBSCAN-SWA_13

175097 : 178481

Clostridium_botulinum_C_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000621175.1\|175097_175460_+	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.2e-07	32.8
WP_000390829.1\|175808_176810_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_001052491.1\|176928_177255_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_001190825.1\|177256_177736_+	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001041107.1\|177710_178481_+	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	1.3e-21	34.9

DBSCAN-SWA_14

192595 : 197319

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000094585.1\|192595_194125_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	7.2e-08	28.1
WP_000214552.1\|194154_195159_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000196911.1\|195295_195550_-	ACT domain-containing protein	NA	NA	NA	NA
WP_000047819.1\|195549_197319_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	7.0e-63	30.1

DBSCAN-SWA_15

201079 : 213670

Moraxella_phage(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159046.1\|201079_202105_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.0e-63	40.9
WP_000106314.1\|202413_204024_-	MutS family DNA mismatch repair protein	A0A0N9R0S5	Chrysochromulina_ericina_virus	1.1e-19	27.0
WP_001791590.1\|204704_204833_+	hypothetical protein	NA	NA	NA	NA
WP_000602050.1\|204977_206906_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	4.2e-53	30.4
WP_001283612.1\|207158_207794_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_078065178.1\|208149_209178_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_000581077.1\|209237_209462_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_001052274.1\|209653_210904_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	3.1e-41	31.7
WP_000790321.1\|211086_212037_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_000141422.1\|212185_213670_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	2.3e-19	25.8

DBSCAN-SWA_16

222831 : 224808

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917289.1\|222831_223116_+	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
WP_000240656.1\|223191_224808_+	chaperonin GroEL	A0A240F779	uncultured_virus	4.4e-157	54.7

DBSCAN-SWA_17

228755 : 232334

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000791403.1\|228755_229811_+	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	2.1e-35	34.3
WP_000595398.1\|229832_230849_+	bi-component leukocidin LukGH subunit G	A0A2I6PER8	Staphylococcus_phage	6.7e-26	28.4
WP_000239607.1\|231341_232334_-	sphingomyelin phosphodiesterase	A0A1P8L6H7	Staphylococcus_phage	2.4e-161	99.6

DBSCAN-SWA_18

237658 : 240105

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000991298.1\|237658_238555_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000645729.1\|238555_239236_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000763046.1\|239232_240105_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2

DBSCAN-SWA_19

245352 : 245754

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000205106.1\|245352_245754_-	YolD-like family protein	U3PG23	Staphylococcus_phage	6.0e-23	42.9

DBSCAN-SWA_20

249951 : 251981

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000149686.1\|249951_250512_-	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_000275716.1\|250883_251981_+	pectate lyase	U5PWM6	Bacillus_phage	1.5e-47	34.6

DBSCAN-SWA_21

256010 : 258294

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284433.1\|256010_257480_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	3.5e-108	45.1
WP_000040873.1\|257472_258294_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.8e-69	52.7

DBSCAN-SWA_22

261997 : 268764

Gordonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000572876.1\|261997_263293_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9
WP_001165363.1\|263401_263704_+	hypothetical protein	NA	NA	NA	NA
WP_000272066.1\|263875_264568_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_000992924.1\|264564_266757_+	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
WP_000774570.1\|266760_268764_+	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	5.0e-110	36.1

DBSCAN-SWA_23

275937 : 280965

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001231458.1\|275937_276885_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.5e-16	27.8
WP_001147864.1\|276965_278327_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	6.3e-104	43.8
WP_000548782.1\|278496_279027_+	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_000140176.1\|279273_280344_+	DNA polymerase IV	NA	NA	NA	NA
WP_000613738.1\|280410_280965_-	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	1.2e-29	35.7

DBSCAN-SWA_24

284418 : 284832

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025174552.1\|284418_284832_+	hypothetical protein	A0A1Q1PVU5	Staphylococcus_phage	2.3e-17	40.6

DBSCAN-SWA_25

289886 : 290516

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153526.1\|289886_290516_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-06	31.7

DBSCAN-SWA_26

305996 : 307733

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344365.1\|305996_307733_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.2

DBSCAN-SWA_27

324194 : 324923

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144055.1\|324194_324923_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7

DBSCAN-SWA_28

335647 : 335992

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290301.1\|335647_335992_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7

DBSCAN-SWA_29

345625 : 346366

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216874.1\|345625_346366_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-24	29.8

DBSCAN-SWA_30

354756 : 365459

Staphylococcus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|354756_356403_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1
WP_000206347.1\|357144_357933_-	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	7.0e-140	95.4
WP_000777467.1\|358326_359619_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8
WP_001066124.1\|359611_360373_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
WP_020444758.1\|360551_361010_+	amidase	R9QTN8	Staphylococcus_phage	4.9e-85	98.7
WP_000727649.1\|361104_361554_-	chemotaxis-inhibiting protein CHIPS	A0A1P8L6A8	Staphylococcus_phage	1.1e-78	100.0
WP_000702263.1\|362238_362589_+	complement inhibitor SCIN-A	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|362641_362902_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_001795394.1\|362880_363189_-	hypothetical protein	M9NTD8	Staphylococcus_phage	2.1e-39	100.0
WP_000669789.1\|363212_363392_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
WP_049280116.1\|363808_364354_+	hypothetical protein	A0A2H4PQP5	Staphylococcus_phage	1.8e-09	32.5
WP_001044434.1\|364604_365459_+	M23 family metallopeptidase	E5G070	Clostridium_phage	6.4e-06	37.9

DBSCAN-SWA_31

371013 : 410061

Staphylococcus_phage(94.29%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000414219.1\|371013_371586_-	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	3.2e-25	94.8
WP_000627534.1\|371686_372028_-	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	2.8e-53	93.8
WP_000669039.1\|372068_372695_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	5.8e-81	84.6
WP_000070638.1\|372770_373766_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	1.7e-66	92.7
WP_001838615.1\|373846_374497_-	hypothetical protein	A0A2H4PQM8	Staphylococcus_phage	4.7e-33	68.5
WP_078065177.1\|374799_375255_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	4.0e-79	97.9
WP_000348384.1\|375414_376893_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.4e-281	96.7
WP_000778517.1\|376897_377899_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	4.1e-185	97.6
WP_000718107.1\|377895_378153_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000672009.1\|378218_378692_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	3.6e-83	98.1
WP_078065176.1\|378696_379443_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	7.8e-141	98.0
WP_150344367.1\|379736_381329_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	99.6
WP_000933822.1\|381700_382894_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
WP_000366163.1\|383018_383927_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
WP_000453310.1\|384138_384972_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.3e-157	99.3
WP_000623471.1\|385221_385575_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	1.0e-21	99.1
WP_001200550.1\|385571_385937_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	6.2e-59	98.3
WP_000091445.1\|386192_386495_-	hypothetical protein	NA	NA	NA	NA
WP_001096492.1\|386752_387466_+	transaldolase	M1PR54	Cyanophage	1.2e-18	34.5
WP_000492902.1\|387934_388555_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_025175276.1\|388721_389357_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001030470.1\|389654_390098_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-57	98.6
WP_001153740.1\|390084_390528_-	competence protein ComK	NA	NA	NA	NA
WP_000671047.1\|390640_391111_-	RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	4.4e-81	97.4
WP_000384171.1\|391309_391534_+	hypothetical protein	NA	NA	NA	NA
WP_001032836.1\|391809_392664_+	autolysin	Q4ZCC7	Staphylococcus_virus	4.9e-38	38.1
WP_000163243.1\|393068_393461_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	1.3e-70	98.5
WP_000989100.1\|393478_394771_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	2.2e-223	97.4
WP_000221186.1\|394770_395085_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	1.4e-51	95.2
WP_001261664.1\|395606_397109_+	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	1.1e-29	98.6
WP_000384177.1\|397601_398633_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	9.0e-196	98.5
WP_000493883.1\|398639_399272_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.4e-111	98.6
WP_001159028.1\|399282_400464_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.6e-225	99.2
WP_001008551.1\|400476_400941_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
WP_001196343.1\|401062_402064_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.7e-183	98.8
WP_071665630.1\|401972_402164_+	hypothetical protein	NA	NA	NA	NA
WP_014937042.1\|402175_402295_+	hypothetical protein	NA	NA	NA	NA
WP_000266100.1\|402297_403125_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000757543.1\|403696_404098_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000764430.1\|404217_404781_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	3.5e-101	98.4
WP_000526539.1\|404777_405731_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
WP_001025062.1\|405840_407022_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	1.2e-217	99.5
WP_001108730.1\|407313_409728_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.5
WP_000836467.1\|409749_410061_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	5.3e-51	98.1

DBSCAN-SWA_32

417068 : 418337

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285005.1\|417068_418337_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.0e-55	98.2

DBSCAN-SWA_33

429859 : 435187

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001091379.1\|429859_430717_+	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	4.4e-71	98.5
WP_001048371.1\|430745_431342_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_000118320.1\|431362_435187_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.6e-83	47.0

DBSCAN-SWA_34

443770 : 445477

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000862098.1\|443770_445477_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	8.0e-274	99.6

DBSCAN-SWA_35

452092 : 454723

Cronobacter_phage(50.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186041.1\|452092_453355_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	4.6e-85	42.1
WP_001279341.1\|453448_454723_-\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	1.7e-10	29.0

DBSCAN-SWA_36

460488 : 464624

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808837.1\|460488_462093_-	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.2e-114	100.0
WP_000291428.1\|462079_463240_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_000553932.1\|463354_463801_-	OsmC family protein	NA	NA	NA	NA
WP_000174273.1\|463880_464624_+	glycerophosphoryl diester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	6.4e-18	29.9

DBSCAN-SWA_37

482390 : 485588

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000226897.1\|482390_485588_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	6.5e-136	30.6

DBSCAN-SWA_38

490521 : 492279

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001232650.1\|490521_492279_+	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	2.6e-41	100.0

DBSCAN-SWA_39

497161 : 505324

Feldmannia_irregularis_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000080026.1\|497161_497866_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.6e-07	28.7
WP_078065174.1\|497865_499527_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	5.8e-35	39.4
WP_000849430.1\|500025_501513_+	hypothetical protein	NA	NA	NA	NA
WP_001038293.1\|501805_504436_+	DNA polymerase I	A8E2B3	Enterococcus_phage	6.1e-47	33.0
WP_001114460.1\|504451_505324_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	1.1e-42	39.1

DBSCAN-SWA_40

509238 : 520392

Brevibacillus_phage(20.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808621.1\|509238_510159_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	8.1e-31	29.4
WP_031844955.1\|510251_510374_+	hypothetical protein	NA	NA	NA	NA
WP_000435132.1\|510570_512508_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	7.8e-116	36.0
WP_000049297.1\|512934_514428_+	amino acid permease	NA	NA	NA	NA
WP_001791162.1\|514655_515183_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.1e-11	33.1
WP_001125540.1\|515211_515412_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_001138360.1\|515458_515815_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_000032657.1\|515958_516567_+	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	6.6e-21	35.9
WP_001280027.1\|516585_517515_+	hypothetical protein	NA	NA	NA	NA
WP_001790560.1\|517519_517630_+	hypothetical protein	NA	NA	NA	NA
WP_000127572.1\|517677_518979_+	trigger factor	NA	NA	NA	NA
WP_000472293.1\|519129_520392_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-139	61.7

DBSCAN-SWA_41

529962 : 532593

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000425344.1\|529962_532593_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.4

DBSCAN-SWA_42

542927 : 578475

uncultured_Mediterranean_phage(18.75%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001005767.1\|542927_543932_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001019166.1\|543933_544959_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001112045.1\|544981_546121_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
WP_001160682.1\|546139_546400_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_000749798.1\|546674_548954_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_031845040.1\|549156_551430_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.1e-64	29.5
WP_000364543.1\|551451_551970_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.1e-28	45.8
WP_001058593.1\|552396_554586_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
WP_000869979.1\|554597_555050_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_000717806.1\|555046_555922_+	SH3 domain-containing protein	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
WP_000590822.1\|556382_557645_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000044807.1\|557660_559427_+\|tRNA	aspartate--tRNA ligase	A0A1V0SIS0	Klosneuvirus	4.1e-15	33.1
WP_031845039.1\|559759_559888_+	hypothetical protein	NA	NA	NA	NA
WP_000682646.1\|559887_560661_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_000102738.1\|560822_562097_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.8e-105	50.7
WP_000704122.1\|562181_562604_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000752909.1\|562703_562886_+	CsbD family protein	NA	NA	NA	NA
WP_000009238.1\|562925_563072_+	hypothetical protein	NA	NA	NA	NA
WP_000985896.1\|563308_564322_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_000409170.1\|564633_565776_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	1.1e-32	29.3
WP_000066097.1\|565776_566895_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000567020.1\|567524_568193_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_150344371.1\|568194_570672_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	3.2e-66	29.3
WP_000734092.1\|571014_573645_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.2e-63	34.2
WP_000426912.1\|573707_573968_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_000939061.1\|573971_574400_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_150344372.1\|574414_574723_+	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_000342260.1\|575007_575646_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
WP_000137775.1\|575648_576572_+	U32 family peptidase	NA	NA	NA	NA
WP_000848304.1\|576583_577852_+	U32 family peptidase	Q6DW11	Phage_TP	4.0e-36	31.7
WP_000648617.1\|577851_578475_+	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1

DBSCAN-SWA_43

585145 : 588618

Lactococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000542305.1\|585145_586366_+	Fic family protein	Q9AZ49	Lactococcus_phage	8.5e-52	33.3
WP_000093395.1\|588132_588618_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.1e-18	35.4

DBSCAN-SWA_44

595952 : 602116

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000439693.1\|595952_596414_+	ComE operon protein 2	A7KUY9	Bacillus_phage	3.6e-35	58.8
WP_078090923.1\|596472_598620_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.2e-32	32.2
WP_001282570.1\|598676_599651_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_001274017.1\|599695_599947_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_000368338.1\|600292_602116_+	elongation factor 4	A0A1S5SF82	Streptococcus_phage	6.1e-22	25.1

DBSCAN-SWA_45

605793 : 608901

Micromonas_pusilla_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000034716.1\|605793_607626_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	4.4e-137	46.5
WP_001119021.1\|607761_608901_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.2e-26	25.8

DBSCAN-SWA_46

615371 : 616319

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001117767.1\|615371_616319_+	PhoH family protein	L7TP00	Rhizobium_phage	6.4e-47	46.8

DBSCAN-SWA_47

619373 : 633101

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030080.1\|619373_620765_-\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	4.7e-46	27.4
WP_001794939.1\|621099_621723_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000411298.1\|621733_622552_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_001217251.1\|622612_624412_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-54	36.0
WP_001283055.1\|624635_625742_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_150344373.1\|625872_626550_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_000683914.1\|626552_627653_+	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	1.0e-08	30.6
WP_001062177.1\|627766_629113_+	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	2.4e-55	34.0
WP_000924210.1\|629122_630013_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	3.4e-26	33.1
WP_001213910.1\|630138_630924_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.1e-19	28.3
WP_000564316.1\|630965_631829_+	metal ABC transporter permease	NA	NA	NA	NA
WP_001095260.1\|631815_632226_+	transcriptional repressor	NA	NA	NA	NA
WP_150344374.1\|632501_633101_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.6e-59	54.2

DBSCAN-SWA_48

639274 : 639898

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223008.1\|639274_639898_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-30	37.1

DBSCAN-SWA_49

645442 : 648254

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019687.1\|645442_646789_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	6.3e-64	39.7
WP_000202177.1\|646781_648254_+	glycine dehydrogenase subunit 2	E3SN07	Prochlorococcus_phage	2.8e-81	41.3

DBSCAN-SWA_50

655752 : 662323

Indivirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001286928.1\|655752_657090_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.6e-43	37.7
WP_000159865.1\|657082_657313_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000183374.1\|657290_658172_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	8.9e-11	26.1
WP_001124985.1\|658603_659056_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000942203.1\|659071_660751_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001291540.1\|660901_662323_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	6.6e-40	26.3

DBSCAN-SWA_51

669152 : 670559

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000193707.1\|669152_670559_+	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	4.3e-31	31.1

DBSCAN-SWA_52

675205 : 676690

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000105070.1\|675205_676690_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	2.4e-80	37.8

DBSCAN-SWA_53

682354 : 691833

Brevibacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000447733.1\|682354_683242_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.6e-37	31.1
WP_001183423.1\|683319_683826_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_000273370.1\|683917_684649_+	segregation/condensation protein A	NA	NA	NA	NA
WP_000368658.1\|684641_685184_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_000159570.1\|685176_685914_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000064078.1\|686046_686772_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-45	43.0
WP_000987767.1\|686752_688504_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	2.6e-22	33.6
WP_001824281.1\|688750_689659_+	DUF1672 domain-containing protein	NA	NA	NA	NA
WP_021758259.1\|689670_691833_+	hypothetical protein	B5WZK7	Staphylococcus_phage	5.5e-102	92.0

DBSCAN-SWA_54

694884 : 697563

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001151997.1\|694884_695133_-	ferredoxin	A0A127AYY7	Bacillus_phage	8.3e-15	48.0
WP_001163813.1\|695240_696194_+	hypothetical protein	NA	NA	NA	NA
WP_000902114.1\|696183_697563_+	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	2.2e-56	33.6

DBSCAN-SWA_55

706981 : 712450

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043863.1\|706981_707254_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	4.2e-28	73.3
WP_000450555.1\|707684_708257_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_000774684.1\|708259_708985_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_078062714.1\|709001_709946_+	heptaprenyl diphosphate synthase	A0A1V0SE37	Indivirus	1.3e-10	24.4
WP_000442477.1\|710037_710487_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_000789522.1\|710696_710897_+	hypothetical protein	NA	NA	NA	NA
WP_001269940.1\|711283_712450_+	chorismate synthase	A0A291AU41	Pandoravirus	2.6e-34	32.3

DBSCAN-SWA_56

716112 : 716688

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000005216.1\|716112_716688_+	IDEAL domain-containing protein	G3MAV7	Bacillus_virus	2.7e-08	27.2

DBSCAN-SWA_57

720074 : 854731

119

Staphylococcus_phage(81.82%)

tRNA,holin,tail,capsid,head,portal,protease,integrase,terminase,lysis

attL 759678:759702|attR 805074:805098

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000361537.1\|720074_721277_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	5.4e-35	43.3
WP_000049916.1\|721263_722235_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_000525073.1\|722258_724952_+	ATP-dependent helicase DinG	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000858789.1\|725273_726566_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.9e-54	30.0
WP_000362218.1\|726894_727581_+	DnaD domain-containing protein	Q938N2	Temperate_phage	1.2e-07	32.6
WP_000253769.1\|727570_728230_+	endonuclease III	NA	NA	NA	NA
WP_000182018.1\|728234_728576_+	hypothetical protein	NA	NA	NA	NA
WP_000138347.1\|729092_731276_-	penicillin-binding protein	NA	NA	NA	NA
WP_001108885.1\|731272_731899_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5
WP_001789942.1\|731879_732005_-	hypothetical protein	NA	NA	NA	NA
WP_001788819.1\|732204_732384_+	hypothetical protein	NA	NA	NA	NA
WP_001000801.1\|732438_732789_+	YppE family protein	NA	NA	NA	NA
WP_000241301.1\|732781_733345_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_001286320.1\|733358_733703_+	cell division regulator GpsB	NA	NA	NA	NA
WP_000487150.1\|734354_735500_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000516799.1\|735583_735916_+	DUF4889 domain-containing protein	NA	NA	NA	NA
WP_000798998.1\|736124_737462_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_000608498.1\|737765_741206_+	hypothetical protein	NA	NA	NA	NA
WP_001133012.1\|741225_742104_+	5'-3' exonuclease	S5M4P0	Bacillus_phage	1.8e-19	29.5
WP_000959419.1\|742578_743697_+	alanine dehydrogenase	NA	NA	NA	NA
WP_000210828.1\|743791_744832_+	bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA	NA	NA	NA
WP_150344375.1\|744862_746185_+	amino acid permease	NA	NA	NA	NA
WP_000414687.1\|746340_747732_+	multidrug efflux MFS transporter NorB	NA	NA	NA	NA
759678:759702	attL	NA	NA	NA	NA
WP_000857185.1\|761648_762686_-\|integrase	site-specific integrase	Q38086	Staphylococcus_phage	4.5e-179	100.0
WP_000391618.1\|762858_763398_-	type II toxin-antitoxin system PemK/MazF family toxin	U5U4R0	Staphylococcus_phage	9.0e-14	33.1
WP_000705238.1\|763537_763705_-	hypothetical protein	Q4ZDJ4	Staphylococcus_virus	1.7e-24	100.0
WP_001089804.1\|763904_764090_-	hypothetical protein	A0A2I6PDS4	Staphylococcus_phage	2.3e-25	100.0
WP_000094092.1\|764243_764951_-	helix-turn-helix transcriptional regulator	G4KNM8	Staphylococcus_phage	1.0e-129	99.6
WP_000548578.1\|765121_765361_+	helix-turn-helix transcriptional regulator	G4KNM9	Staphylococcus_phage	2.3e-38	100.0
WP_000435341.1\|765373_765634_+	transcriptional regulator	A7TW91	Staphylococcus_phage	2.7e-40	100.0
WP_000351243.1\|765657_766197_-	hypothetical protein	A7TW92	Staphylococcus_phage	1.7e-97	100.0
WP_001148618.1\|766253_767006_+	oxidoreductase	A0A1X9H0A0	Staphylococcus_phage	8.7e-140	100.0
WP_000388066.1\|767022_767217_+	hypothetical protein	A0A1X9H0A2	Staphylococcus_phage	1.5e-19	100.0
WP_000939496.1\|767247_767388_+	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	1.9e-16	100.0
WP_000275058.1\|767402_768035_-	hypothetical protein	A7TW95	Staphylococcus_phage	1.5e-113	100.0
WP_001120197.1\|768093_768414_+	DUF771 domain-containing protein	A0A2I6PDH6	Staphylococcus_phage	1.5e-56	100.0
WP_000066020.1\|768410_768572_+	DUF1270 domain-containing protein	A0A2I6PDF7	Staphylococcus_phage	1.9e-20	100.0
WP_000291489.1\|768664_768925_+	DUF1108 family protein	A0A1W6JQ03	Staphylococcus_phage	7.6e-43	100.0
WP_001205732.1\|768933_769197_+	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
WP_000700562.1\|769205_771149_+	AAA family ATPase	A0A2I6PDH3	Staphylococcus_phage	0.0e+00	99.2
WP_031764964.1\|771150_772071_+	recombinase	A0A2I6PDH5	Staphylococcus_phage	3.0e-166	99.7
WP_078090917.1\|772151_772760_+	MBL fold metallo-hydrolase	A0A1W6JPL3	Staphylococcus_phage	5.1e-82	96.9
WP_000610649.1\|772760_773231_+	single-stranded DNA-binding protein	S4V682	Staphylococcus_phage	3.1e-79	96.2
WP_000148302.1\|773260_774145_+	DnaD domain protein	S4V6D4	Staphylococcus_phage	3.1e-136	96.6
WP_000338528.1\|774151_774370_+	hypothetical protein	A0A1P8L6E4	Staphylococcus_phage	1.4e-37	100.0
WP_000401963.1\|774378_774783_+	RusA family crossover junction endodeoxyribonuclease	A0A0E3XBN4	Staphylococcus_phage	1.0e-70	98.5
WP_000101275.1\|774795_775164_+	hypothetical protein	I1W656	Staphylococcus_phage	6.3e-51	100.0
WP_000131381.1\|775167_775410_+	hypothetical protein	A0A1P8L6E3	Staphylococcus_phage	3.0e-41	100.0
WP_001065046.1\|775424_775676_+	DUF1024 family protein	G4KNP4	Staphylococcus_phage	4.1e-38	96.4
WP_001061844.1\|776298_776832_+	hypothetical protein	A0A0H3U2Z8	Staphylococcus_phage	5.1e-94	98.9
WP_000195810.1\|776868_777075_+	DUF1381 domain-containing protein	S4V684	Staphylococcus_phage	7.6e-30	100.0
WP_000595267.1\|777071_777221_+	hypothetical protein	R9QSU6	Staphylococcus_phage	1.8e-17	100.0
WP_000265041.1\|778028_778229_+	DUF1514 family protein	R9QT57	Staphylococcus_phage	1.1e-28	100.0
WP_000590126.1\|778256_778673_+	hypothetical protein	A0A1X9H0U8	Staphylococcus_phage	2.9e-76	100.0
WP_000988336.1\|778904_779204_+	HNH endonuclease	A0EWY8	Staphylococcus_phage	4.6e-52	100.0
WP_000402904.1\|779334_779679_+	hypothetical protein	G4KNP9	Staphylococcus_phage	9.4e-57	100.0
WP_000625088.1\|779675_781337_+\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	100.0
WP_000025274.1\|781352_782540_+\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	1.0e-219	100.0
WP_000861914.1\|782523_783261_+\|protease	Clp protease ClpP	C8CH20	Staphylococcus_phage	2.3e-129	100.0
WP_000154555.1\|783284_784430_+\|capsid	phage major capsid protein	A0A1X9H072	Staphylococcus_phage	5.6e-215	100.0
WP_000238236.1\|784449_784734_+	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
WP_000150936.1\|784723_785008_+\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000755150.1\|784991_785354_+\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000114225.1\|785350_785755_+	hypothetical protein	A0A2I6PDJ6	Staphylococcus_phage	4.3e-69	100.0
WP_000565498.1\|785751_786159_+	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000268741.1\|786159_786804_+\|tail	phage tail protein	W5R9H4	Staphylococcus_phage	6.5e-120	100.0
WP_072050172.1\|786845_787070_+	hypothetical protein	A0A075LYE8	Staphylococcus_phage	8.8e-32	98.6
WP_001096355.1\|787119_787470_+	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_000504552.1\|787714_792226_+\|tail	phage tail tape measure protein	A0A1X9H084	Staphylococcus_phage	0.0e+00	90.8
WP_000567408.1\|792222_793707_+\|tail	phage tail protein	A0A2I6PDJ0	Staphylococcus_phage	1.2e-297	100.0
WP_000582158.1\|793722_797508_+	hypothetical protein	A0A1X9H0H3	Staphylococcus_phage	0.0e+00	98.4
WP_001153681.1\|797497_797650_+	hypothetical protein	D2JLG0	Staphylococcus_phage	5.2e-20	100.0
WP_001040261.1\|797696_797984_+	hypothetical protein	D2JLG1	Staphylococcus_phage	1.3e-43	100.0
WP_000539688.1\|798041_798338_+	DUF2951 domain-containing protein	D2JLG2	Staphylococcus_phage	2.9e-46	100.0
WP_011447039.1\|798487_798664_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_001791821.1\|798716_798824_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|798875_799130_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|799141_799897_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000919350.1\|800087_800579_+	staphylokinase	A0A1X9H028	Staphylococcus_phage	9.5e-87	100.0
WP_020444758.1\|801105_801564_+	amidase	R9QTN8	Staphylococcus_phage	4.9e-85	98.7
WP_000727651.1\|801658_802108_-	chemotaxis-inhibiting protein CHIPS	A0A1P8L6A8	Staphylococcus_phage	2.1e-77	99.3
WP_000702262.1\|802787_803138_+	complement inhibitor SCIN-A	A7TWS0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|803190_803451_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_001795394.1\|803429_803738_-	hypothetical protein	M9NTD8	Staphylococcus_phage	2.1e-39	100.0
WP_000669789.1\|803761_803941_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
WP_001062933.1\|822779_823181_-	ribonuclease HI family protein	NA	NA	NA	NA
805074:805098	attR	NA	NA	NA	NA
WP_000282171.1\|823422_824127_-	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	8.4e-12	23.8
WP_014533106.1\|824344_824566_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_001165814.1\|824577_824829_+	hypothetical protein	NA	NA	NA	NA
WP_000404627.1\|824866_825991_+	virulence factor	NA	NA	NA	NA
WP_000995285.1\|826006_826444_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_000934885.1\|826867_827824_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.6e-167	85.2
WP_000175746.1\|828023_828503_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	2.0e-73	79.9
WP_000166052.1\|828517_829357_+	fatty acid kinase FakB2	A0A0N9SI50	Staphylococcus_phage	3.0e-48	76.5
WP_000159902.1\|829450_829984_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000913315.1\|829976_830405_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_000473654.1\|830416_830917_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_000801007.1\|830916_831138_+	hypothetical protein	NA	NA	NA	NA
WP_000342123.1\|831329_832820_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	8.6e-22	28.5
WP_000620194.1\|833219_833729_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000160908.1\|833740_834811_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA
WP_000084773.1\|834827_835442_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000166795.1\|837240_838596_+	sensor histidine kinase ArlS	A0A1V0SGX0	Hokovirus	8.9e-10	25.0
WP_000180678.1\|838884_841683_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_001115459.1\|841696_842965_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA
WP_000334509.1\|843544_844354_+	hypothetical protein	NA	NA	NA	NA
WP_000902174.1\|844382_844586_+	hypothetical protein	NA	NA	NA	NA
WP_001185421.1\|844766_845558_+	MoxR family ATPase	R4TG24	Halovirus	3.3e-12	34.2
WP_001283670.1\|845571_847458_+	nitric oxide reductase activation protein NorD	NA	NA	NA	NA
WP_001039275.1\|847682_849026_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_000138424.1\|849099_850236_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	7.4e-34	28.3
WP_001788788.1\|850267_850897_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_001215907.1\|850915_851185_-	acylphosphatase	NA	NA	NA	NA
WP_000269923.1\|851343_851652_+	DUF1033 family protein	NA	NA	NA	NA
WP_001791186.1\|851599_851788_-	hypothetical protein	NA	NA	NA	NA
WP_000809131.1\|851822_852023_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	66.2
WP_000876210.1\|852219_852621_+	hypothetical protein	NA	NA	NA	NA
WP_000558406.1\|852754_853372_+\|protease	protease	NA	NA	NA	NA
WP_000216951.1\|853465_854731_-	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	3.1e-12	22.7

DBSCAN-SWA_58

862576 : 864178

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000942303.1\|862576_864178_-	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	5.5e-51	25.7

DBSCAN-SWA_59

868604 : 872060

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000079452.1\|868604_869456_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	6.8e-16	29.7
WP_000974847.1\|869462_870104_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000077558.1\|870245_872060_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.7e-153	46.8

DBSCAN-SWA_60

875474 : 876176

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571245.1\|875474_876176_+	ABC transporter ATP-binding protein	A0A2K9L0W2	Tupanvirus	5.8e-13	28.3

DBSCAN-SWA_61

884476 : 886047

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000173835.1\|884476_885475_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.1e-33	34.9
WP_000604804.1\|885480_886047_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.8e-23	31.3

DBSCAN-SWA_62

890365 : 891628

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000283026.1\|890365_891628_-	Y-family DNA polymerase	O64031	Bacillus_phage	2.6e-96	44.6

DBSCAN-SWA_63

901274 : 905668

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031901612.1\|901274_903677_-	DNA topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	3.9e-93	32.4
WP_033848152.1\|903676_905668_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	4.0e-115	40.4

DBSCAN-SWA_64

911445 : 913092

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001088978.1\|911445_913092_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.5e-22	24.4

DBSCAN-SWA_65

916761 : 917883

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000691293.1\|916761_917883_-	exonuclease SbcCD subunit D	A0A1X9I9U0	Staphylococcus_phage	3.3e-10	22.7

DBSCAN-SWA_66

922033 : 927689

Phage_Wrath(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344377.1\|922033_922657_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	3.5e-17	63.8
WP_000380725.1\|923036_923900_-	CAP domain-containing protein	U5Q0C0	Bacillus_phage	2.4e-16	41.5
WP_001791425.1\|923973_924078_+	hypothetical protein	NA	NA	NA	NA
WP_000688126.1\|924074_925052_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	2.1e-186	100.0
WP_001085655.1\|925208_925478_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_001265708.1\|925931_926081_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000078506.1\|926171_927689_-	catalase	A0A2K9L0T1	Tupanvirus	1.8e-91	43.8

DBSCAN-SWA_67

937860 : 938394

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000841351.1\|937860_938394_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.4e-21	43.5

DBSCAN-SWA_68

943816 : 951755

Staphylococcus_phage(66.67%)

transposase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078237844.1\|943816_944485_-\|head	phage head morphogenesis protein	Q4ZE35	Staphylococcus_virus	3.2e-29	68.7
WP_025174548.1\|944687_944957_-	hypothetical protein	NA	NA	NA	NA
WP_000440735.1\|945002_945281_-	hypothetical protein	NA	NA	NA	NA
WP_031786973.1\|945247_945376_-	hypothetical protein	NA	NA	NA	NA
WP_000780597.1\|945436_945631_-	hypothetical protein	A0A1J0MG79	Staphylococcus_phage	2.8e-18	71.4
WP_001813273.1\|945630_945885_-	hypothetical protein	A0A1J0MF61	Staphylococcus_phage	1.4e-25	62.7
WP_000956747.1\|946358_946610_-	hypothetical protein	NA	NA	NA	NA
WP_000477491.1\|946736_946841_-	hypothetical protein	NA	NA	NA	NA
WP_000006110.1\|947352_947538_-	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.4e-19	78.7
WP_000777467.1\|947871_949164_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8
WP_001066124.1\|949156_949918_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
WP_001002343.1\|950141_950348_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	1.9e-12	56.7
WP_078065144.1\|950643_950868_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	4.3e-18	71.0
WP_001659797.1\|951557_951755_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	1.7e-10	48.4

DBSCAN-SWA_69

956825 : 957302

Fowlpox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000448084.1\|956825_957302_+	glutathione peroxidase	Q70H87	Fowlpox_virus	7.9e-22	37.3

DBSCAN-SWA_70

963244 : 969725

Acanthocystis_turfacea_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001103747.1\|963244_964063_-	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	3.1e-26	35.1
WP_001077635.1\|964536_965079_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_000516254.1\|965084_967094_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	5.3e-59	29.5
WP_000073335.1\|967106_969725_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.4e-40	23.6

DBSCAN-SWA_71

979140 : 980184

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368166.1\|979140_980184_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.3e-124	69.2

DBSCAN-SWA_72

984920 : 990464

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000664781.1\|984920_986207_-	insulinase family protein	G3MBJ8	Bacillus_virus	7.9e-16	28.4
WP_000089936.1\|986206_987472_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	5.4e-41	27.0
WP_001293310.1\|987502_988216_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_078091196.1\|988220_990464_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.9e-84	47.7

DBSCAN-SWA_73

995605 : 1007420

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000864174.1\|995605_996577_-	riboflavin biosynthesis protein RibF	A0A1V0SJE1	Klosneuvirus	1.7e-07	32.1
WP_000282295.1\|996591_997509_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000097322.1\|997678_998029_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000043639.1\|998415_1000533_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	6.2e-26	25.3
WP_000020853.1\|1000537_1000855_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000727423.1\|1000851_1001136_-	YlxR family protein	NA	NA	NA	NA
WP_000097463.1\|1001156_1002332_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000036631.1\|1002352_1002820_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_078065168.1\|1003109_1007420_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	3.5e-23	41.2

DBSCAN-SWA_74

1011718 : 1012489

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344378.1\|1011718_1012489_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.2e-24	41.5

DBSCAN-SWA_75

1017263 : 1030027

Erwinia_phage(20.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000379054.1\|1017263_1018667_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	4.9e-27	25.6
WP_000072681.1\|1018732_1019278_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001015609.1\|1019274_1020171_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	6.1e-31	31.9
WP_000195254.1\|1020588_1021896_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_001557331.1\|1022051_1024127_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-105	39.2
WP_000620183.1\|1024299_1025172_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_000672856.1\|1025343_1026588_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA
WP_000110253.1\|1027054_1027963_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.0e-17	33.2
WP_001020801.1\|1027984_1029151_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_000176399.1\|1029259_1030027_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	2.5e-25	44.1

DBSCAN-SWA_76

1043322 : 1045443

Acanthamoeba_polyphaga_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000043237.1\|1043322_1044054_-	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8
WP_000426914.1\|1044169_1044403_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000167269.1\|1044708_1045443_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3

DBSCAN-SWA_77

1055813 : 1057808

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000579552.1\|1055813_1057808_-	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8

DBSCAN-SWA_78

1060955 : 1061891

Prochlorococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161279.1\|1060955_1061891_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	6.2e-10	28.0

DBSCAN-SWA_79

1066896 : 1069153

Methanothermobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000722166.1\|1066896_1068096_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	2.1e-42	32.9
WP_000933956.1\|1068311_1068530_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000368225.1\|1068529_1069153_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	6.1e-22	34.1

DBSCAN-SWA_80

1072668 : 1073280

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001040248.1\|1072668_1073280_-	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	1.6e-27	33.8

DBSCAN-SWA_81

1077247 : 1081858

Halovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001190913.1\|1077247_1078348_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.6e-63	36.7
WP_000767026.1\|1078349_1079624_-	dihydroorotase	NA	NA	NA	NA
WP_001016166.1\|1079641_1080523_-	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.6e-31	33.9
WP_001178613.1\|1080550_1081858_-	uracil transporter	Q9KX94	Enterobacteria_phage	3.3e-54	34.0

DBSCAN-SWA_82

1087662 : 1090416

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344379.1\|1087662_1090416_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	3.6e-90	28.0

DBSCAN-SWA_83

1109998 : 1110187

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001245798.1\|1109998_1110187_-	hypothetical protein	A0A0K1LL29	Staphylococcus_phage	8.5e-20	85.2

DBSCAN-SWA_84

1119328 : 1122410

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001802045.1\|1119328_1119553_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	5.6e-18	71.4
WP_000765708.1\|1119509_1119656_-	hypothetical protein	NA	NA	NA	NA
WP_000857485.1\|1120328_1121288_+	beta-channel forming cytolysin	A0A2H4PQH7	Staphylococcus_phage	1.3e-34	30.3
WP_000231631.1\|1121764_1121998_+	hypothetical protein	NA	NA	NA	NA
WP_138269798.1\|1122161_1122410_+	hypothetical protein	M9NS66	Staphylococcus_phage	3.2e-06	52.5

DBSCAN-SWA_85

1135353 : 1139911

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001018928.1\|1135353_1135668_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.6e-25	46.6
WP_001249291.1\|1135840_1138189_-	endonuclease MutS2	F2QAF8	Phaeocystis_pouchetii_virus	2.9e-16	25.8
WP_000161946.1\|1138198_1139911_-	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	8.9e-15	24.0

DBSCAN-SWA_86

1144788 : 1145847

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003566.1\|1144788_1145847_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5

DBSCAN-SWA_87

1157793 : 1160704

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000401377.1\|1157793_1158276_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2
WP_001263802.1\|1158277_1158820_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_000814565.1\|1158889_1159279_+	hypothetical protein	NA	NA	NA	NA
WP_001049150.1\|1159281_1159536_-	YlbG family protein	NA	NA	NA	NA
WP_000757578.1\|1159774_1160704_+	glycerophosphodiester phosphodiesterase	M1I1K8	Paramecium_bursaria_Chlorella_virus	2.2e-12	25.8

DBSCAN-SWA_88

1172178 : 1176693

Erysipelothrix_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000182659.1\|1172178_1174026_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	1.8e-21	26.2
WP_000810617.1\|1174127_1174319_+	YlaF family protein	NA	NA	NA	NA
WP_001240322.1\|1174472_1175300_-	inositol monophosphatase	NA	NA	NA	NA
WP_000170598.1\|1175456_1176071_+	YktB family protein	NA	NA	NA	NA
WP_064128952.1\|1176207_1176693_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.8e-19	35.4

DBSCAN-SWA_89

1184825 : 1193659

Mycoplasma_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000433555.1\|1184825_1185920_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-37	44.3
WP_001020622.1\|1185932_1186472_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000455590.1\|1186615_1186891_-	UPF0223 family protein	NA	NA	NA	NA
WP_000260117.1\|1187059_1188466_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-46	29.1
WP_000863437.1\|1188469_1189762_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_000068176.1\|1189852_1190830_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_150344382.1\|1190833_1191946_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	A0A0K0KW14	Prochlorococcus_phage	1.4e-05	27.8
WP_000668338.1\|1192116_1192743_-	cell-wall-binding lipoprotein	NA	NA	NA	NA
WP_000957036.1\|1193107_1193659_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-13	42.2

DBSCAN-SWA_90

1202747 : 1203920

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000685063.1\|1202747_1203920_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.0e-75	42.8

DBSCAN-SWA_91

1207099 : 1221860

Prochlorococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000921971.1\|1207099_1208500_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-10	26.3
WP_000273256.1\|1208492_1209299_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_071665620.1\|1209403_1209601_+	hypothetical protein	NA	NA	NA	NA
WP_150344383.1\|1209564_1210812_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_000709285.1\|1210833_1212312_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	2.7e-76	51.5
WP_000238670.1\|1212326_1212893_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.6e-29	40.1
WP_000030818.1\|1212895_1213924_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.3e-61	41.4
WP_000483726.1\|1213916_1215401_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.6e-44	31.5
WP_000032747.1\|1215379_1217569_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.8e-140	39.7
WP_000666799.1\|1217561_1218233_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_150344384.1\|1218234_1218498_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000174047.1\|1218497_1219202_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	1.4e-46	41.2
WP_001010401.1\|1219205_1220330_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000861570.1\|1220316_1220799_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.0e-22	44.7
WP_000225832.1\|1220999_1221860_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.2e-39	38.8

DBSCAN-SWA_92

1232175 : 1235940

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001074527.1\|1232175_1235940_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	A0A1J0MFB0	Staphylococcus_phage	1.1e-54	37.6

DBSCAN-SWA_93

1239607 : 1258907

Staphylococcus_phage(50.0%)

transposase,protease,holin,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000676553.1\|1239607_1240627_+	Glu-specific serine endopeptidase SspA	A0A2H4PQP7	Staphylococcus_phage	6.3e-16	32.3
WP_001088784.1\|1240708_1241890_+\|protease	cysteine protease staphopain B	NA	NA	NA	NA
WP_000284457.1\|1241927_1242257_+	staphostatin B	NA	NA	NA	NA
WP_000184947.1\|1242495_1243317_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_000150220.1\|1243309_1244113_-	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_000526687.1\|1244099_1245773_-	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_001804449.1\|1245759_1246971_-	isochorismate synthase	NA	NA	NA	NA
WP_072357920.1\|1247074_1247152_-	hypothetical protein	NA	NA	NA	NA
WP_000070968.1\|1247302_1248241_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_000620942.1\|1248291_1248843_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001788574.1\|1248932_1249223_+	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
WP_020978112.1\|1249286_1249418_+	hypothetical protein	NA	NA	NA	NA
WP_001081331.1\|1249463_1250423_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000766009.1\|1250910_1251267_+	DoxX family protein	NA	NA	NA	NA
WP_001824253.1\|1251355_1251493_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
WP_000571185.1\|1252016_1252658_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-19	33.7
WP_000668628.1\|1252654_1252975_-	YxeA family protein	NA	NA	NA	NA
WP_000870825.1\|1252977_1254942_-\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_029656376.1\|1254985_1255252_-\|bacteriocin	bacteriocin transporter	NA	NA	NA	NA
WP_099112139.1\|1255901_1255979_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_014363402.1\|1256262_1257909_-\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	3.7e-292	99.3
WP_001033867.1\|1258304_1258907_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_94

1264874 : 1278511

Streptococcus_phage(33.33%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078064575.1\|1264874_1267199_-\|protease	serine protease	W5SAB9	Pithovirus	2.1e-11	27.4
WP_000928413.1\|1267414_1268218_-	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_001049957.1\|1268519_1270082_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	2.2e-36	28.2
WP_001798480.1\|1270081_1270342_-	hypothetical protein	NA	NA	NA	NA
WP_000340127.1\|1270322_1271807_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_078055982.1\|1272141_1272678_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-29	43.6
WP_000746375.1\|1272658_1273162_-\|transposase	transposase	NA	NA	NA	NA
WP_001255377.1\|1273270_1273612_-	cystatin-like fold lipoprotein	NA	NA	NA	NA
WP_000810443.1\|1273667_1274258_-	hypothetical protein	NA	NA	NA	NA
WP_049284735.1\|1274264_1275311_-	CHAP domain-containing protein	A0A1X9I9L1	Staphylococcus_phage	8.1e-19	36.9
WP_000681144.1\|1275300_1277148_-	membrane protein	NA	NA	NA	NA
WP_001251211.1\|1277152_1278511_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	2.0e-41	29.9

DBSCAN-SWA_95

1304641 : 1306450

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082725.1\|1304641_1306450_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.5e-47	24.5

DBSCAN-SWA_96

1310399 : 1316150

Bacillus_virus(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|1310399_1312046_-\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1
WP_001180264.1\|1312332_1313214_-	ABC transporter permease	NA	NA	NA	NA
WP_000593421.1\|1313225_1314188_-	ABC transporter permease	NA	NA	NA	NA
WP_000427764.1\|1314180_1315161_-	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-16	34.1
WP_001067032.1\|1315163_1316150_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-15	30.0

DBSCAN-SWA_97

1319802 : 1321816

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000786743.1\|1319802_1320744_-	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	9.3e-06	26.9
WP_000140050.1\|1320733_1321816_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-19	28.8

DBSCAN-SWA_98

1330409 : 1337219

Micromonas_sp._RCC1109_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000619354.1\|1330409_1331555_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	3.9e-06	26.3
WP_001047064.1\|1331664_1332534_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000353962.1\|1332592_1335202_-	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	9.5e-117	36.7
WP_001044212.1\|1335404_1337219_-	acetyltransferase	B5WZU0	Pseudomonas_phage	1.8e-37	34.4

DBSCAN-SWA_99

1342443 : 1346097

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154915.1\|1342443_1346097_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	1.2e-24	24.5

DBSCAN-SWA_100

1356850 : 1363845

Paramecium_bursaria_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185327.1\|1356850_1357780_+	glycerophosphodiester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	1.5e-16	28.7
WP_000138487.1\|1358118_1359363_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_000167314.1\|1359471_1360662_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.3e-33	29.7
WP_000838027.1\|1360970_1362098_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_001067294.1\|1362459_1362837_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000035058.1\|1363251_1363845_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.1e-25	41.3

DBSCAN-SWA_101

1373779 : 1377397

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001009700.1\|1373779_1375255_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	4.0e-48	35.2
WP_000046076.1\|1375385_1376594_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_001143497.1\|1377037_1377397_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	2.1e-14	38.6

DBSCAN-SWA_102

1381441 : 1384110

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000613541.1\|1381441_1382656_-	PG:teichoic acid D-alanyltransferase DltB	A0A125RNP0	Pseudomonas_phage	8.5e-20	26.1
WP_000129662.1\|1382652_1384110_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	2.6e-39	28.3

DBSCAN-SWA_103

1397573 : 1421837

Staphylococcus_phage(75.0%)

coat,integrase,terminase

attL 1402846:1402867|attR 1423510:1423531

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000807670.1\|1397573_1398815_-	cysteine desulfurase	Q2XUY6	environmental_halophage	8.2e-111	44.8
WP_000205572.1\|1398929_1400237_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000168845.1\|1400334_1401096_-	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	4.4e-06	23.3
WP_001183851.1\|1401424_1402276_+	DUF368 domain-containing protein	NA	NA	NA	NA
WP_064128943.1\|1402509_1402704_-	CsbD family protein	NA	NA	NA	NA
1402846:1402867	attL	NA	NA	NA	NA
WP_000382163.1\|1403828_1404029_-	hypothetical protein	W5R9N2	Staphylococcus_phage	3.7e-29	100.0
WP_000139423.1\|1404015_1404126_-	hypothetical protein	W5R8J7	Staphylococcus_phage	1.7e-12	100.0
WP_001795626.1\|1404196_1404349_-	hypothetical protein	A0A0F6N3H2	Staphylococcus_phage	7.6e-19	98.0
WP_001035631.1\|1404722_1405280_+	DUF4888 domain-containing protein	A0A1W6JQE5	Staphylococcus_phage	1.4e-70	73.8
WP_000278085.1\|1405357_1406158_-	staphylococcal enterotoxin type B	A0A097PAT7	Streptococcus_pyogenes_phage	1.0e-53	49.4
WP_001293067.1\|1406465_1407035_-\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	1.0e-100	97.9
WP_045181470.1\|1407031_1407244_-	hypothetical protein	Q4ZE86	Staphylococcus_phage	1.1e-31	98.6
WP_000771368.1\|1407375_1407903_-\|coat	spore coat protein	A0A1W6JQH7	Staphylococcus_phage	3.5e-87	97.1
WP_150344385.1\|1407953_1408172_-	hypothetical protein	NA	NA	NA	NA
WP_000846285.1\|1408189_1408768_-	hypothetical protein	A0A2H4JBG0	uncultured_Caudovirales_phage	1.4e-28	38.4
WP_001190615.1\|1408779_1409121_-	hypothetical protein	Q4ZE66	Staphylococcus_phage	1.4e-57	99.1
WP_001019764.1\|1409637_1410279_-	hypothetical protein	Q4ZE67	Staphylococcus_phage	1.5e-108	91.5
WP_000998181.1\|1410275_1410560_-	hypothetical protein	A0A1W6JQE4	Staphylococcus_phage	1.9e-47	95.7
WP_001039168.1\|1410561_1410924_-	hypothetical protein	A0A1W6JQD5	Staphylococcus_phage	8.9e-66	99.2
WP_000390454.1\|1411209_1412679_-	hypothetical protein	A0A1W6JQD6	Staphylococcus_phage	2.9e-288	99.0
WP_001002732.1\|1412695_1413565_-	hypothetical protein	A0A1W6JQL5	Staphylococcus_phage	3.4e-156	92.7
WP_001103942.1\|1413628_1413949_-	DUF1474 family protein	Q4ZE75	Staphylococcus_phage	1.3e-20	51.9
WP_001058486.1\|1413951_1414161_-	hypothetical protein	Q4ZE76	Staphylococcus_phage	1.7e-29	94.2
WP_000784875.1\|1414153_1414300_-	hypothetical protein	NA	NA	NA	NA
WP_000091731.1\|1414311_1414584_-	winged helix-turn-helix domain-containing protein	Q4ZE77	Staphylococcus_phage	9.7e-41	90.0
WP_000243851.1\|1414576_1414840_-	helix-turn-helix transcriptional regulator	A0A2H4J9X2	uncultured_Caudovirales_phage	3.1e-36	94.8
WP_001260004.1\|1415032_1415365_+	helix-turn-helix transcriptional regulator	A0A1J0MFC1	Staphylococcus_phage	1.6e-37	74.5
WP_150344386.1\|1415376_1415835_+	ImmA/IrrE family metallo-endopeptidase	A0A0H4J322	Staphylococcus_phage	1.1e-65	82.4
WP_001228759.1\|1415851_1416283_+	hypothetical protein	Q4ZCB6	Staphylococcus_virus	5.1e-36	56.0
WP_001033316.1\|1416352_1417081_+	staphylococcal enterotoxin type Q	A0EX09	Staphylococcus_phage	2.3e-28	35.4
WP_000733774.1\|1417104_1417833_+	staphylococcal enterotoxin type K	A0EX09	Staphylococcus_phage	5.5e-22	31.8
WP_000266157.1\|1417921_1419142_+\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	6.4e-100	47.5
WP_000732334.1\|1419284_1420106_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000520233.1\|1420123_1420819_-	ABC transporter permease	NA	NA	NA	NA
WP_000571213.1\|1420811_1421837_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.4e-28	36.8
1423510:1423531	attR	NA	NA	NA	NA

DBSCAN-SWA_104

1424884 : 1432277

Streptococcus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|1424884_1426531_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1
WP_000290491.1\|1426561_1426942_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_000589549.1\|1427099_1427456_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.7e-19	46.6
WP_001147955.1\|1427599_1427920_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	3.1e-06	36.4
WP_000422908.1\|1428069_1428609_-	nitroreductase	NA	NA	NA	NA
WP_000150029.1\|1428691_1429408_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	6.8e-17	30.1
WP_000974455.1\|1429555_1429978_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000569881.1\|1430376_1430871_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000255554.1\|1431026_1431644_+	amino acid transporter	NA	NA	NA	NA
WP_072353886.1\|1431716_1432277_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	2.2e-31	40.9

DBSCAN-SWA_105

1435683 : 1436927

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001059082.1\|1435683_1435884_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.4e-20	70.8
WP_001823812.1\|1436240_1436927_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	1.1e-32	53.4

DBSCAN-SWA_106

1446299 : 1455059

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000757406.1\|1446299_1447028_+	DUF5067 domain-containing protein	H9A0X8	Staphylococcus_phage	1.3e-18	37.5
WP_000999092.1\|1447315_1447930_-	stage II sporulation protein M	NA	NA	NA	NA
WP_001085185.1\|1448896_1449361_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.5e-81	100.0
WP_001050031.1\|1449382_1451755_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.9e-92	38.8
WP_001165974.1\|1451788_1452529_-	carboxylesterase	NA	NA	NA	NA
WP_000556760.1\|1452657_1452891_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_000785252.1\|1452957_1453416_-	hypothetical protein	NA	NA	NA	NA
WP_001121760.1\|1453754_1455059_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.7e-196	80.7

DBSCAN-SWA_107

1466214 : 1471915

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001049165.1\|1466214_1466802_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.2e-53	55.3
WP_000006551.1\|1467371_1468316_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.1e-54	40.6
WP_001248941.1\|1468426_1469422_-	YvcK family protein	A1IMD5	Streptococcus_phage	4.8e-53	41.9
WP_000369719.1\|1469418_1470330_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	36.1
WP_000134959.1\|1470979_1471915_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	4.9e-84	49.2

DBSCAN-SWA_108

1476308 : 1479155

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031844946.1\|1476308_1479155_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.2

DBSCAN-SWA_109

1482473 : 1483313

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344390.1\|1482473_1483313_-	CHAP domain-containing protein	A0A2H4J675	uncultured_Caudovirales_phage	5.0e-11	41.3

DBSCAN-SWA_110

1489391 : 1495104

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000370987.1\|1489391_1490474_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	3.4e-44	35.5
WP_000686342.1\|1490837_1491704_-	DegV family protein	NA	NA	NA	NA
WP_000192947.1\|1491847_1492489_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.0e-37	48.3
WP_000258151.1\|1492660_1493716_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_000460983.1\|1494033_1495104_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-16	33.5

DBSCAN-SWA_111

1504386 : 1528472

uncultured_Caudovirales_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000616873.1\|1504386_1505148_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6
WP_150344392.1\|1505144_1506101_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
WP_000876318.1\|1506087_1507059_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
WP_000499195.1\|1507097_1507253_-	hypothetical protein	NA	NA	NA	NA
WP_000562499.1\|1507752_1508724_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	2.7e-170	91.0
WP_000855505.1\|1508841_1510947_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000692521.1\|1510909_1511308_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_001790091.1\|1511457_1511724_-	hypothetical protein	NA	NA	NA	NA
WP_001068497.1\|1512108_1512975_+	DMT family transporter	NA	NA	NA	NA
WP_000930014.1\|1512994_1513495_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
WP_071665613.1\|1513524_1513773_+	hypothetical protein	NA	NA	NA	NA
WP_000193751.1\|1513834_1515340_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_031760357.1\|1515417_1515519_-	hypothetical protein	NA	NA	NA	NA
WP_000429011.1\|1515611_1516529_+	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	6.2e-07	22.0
WP_138269778.1\|1516934_1517147_-	hypothetical protein	NA	NA	NA	NA
WP_000197262.1\|1517136_1517679_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000663039.1\|1517837_1518896_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	1.4e-21	26.4
WP_000180997.1\|1519135_1520650_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_000589262.1\|1520642_1521620_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-25	33.3
WP_000983680.1\|1521841_1523623_-	DNA helicase RecQ	A0A2P1EM61	Moumouvirus	8.5e-77	36.8
WP_000525113.1\|1523634_1525518_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.3e-55	30.6
WP_064128952.1\|1525862_1526348_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.8e-19	35.4
WP_000098285.1\|1526531_1528472_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	1.3e-110	39.5

DBSCAN-SWA_112

1531620 : 1541467

Pandoravirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001217797.1\|1531620_1532772_-	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	2.1e-23	36.1
WP_000604508.1\|1532755_1533349_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	6.8e-39	44.0
WP_000446724.1\|1533699_1534368_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
WP_000941336.1\|1534369_1534789_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_001062976.1\|1534792_1535506_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000637683.1\|1535604_1536189_+	hypothetical protein	NA	NA	NA	NA
WP_001093553.1\|1536468_1536909_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001037807.1\|1537250_1537724_+	DoxX family protein	NA	NA	NA	NA
WP_000149344.1\|1537698_1538385_+	response regulator transcription factor	NA	NA	NA	NA
WP_000244415.1\|1538384_1539440_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	3.6e-14	29.8
WP_000702774.1\|1539512_1540496_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	4.3e-62	43.3
WP_000931233.1\|1540627_1541467_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	6.7e-56	41.9

DBSCAN-SWA_113

1553009 : 1554383

Powai_lake_megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000952025.1\|1553009_1554383_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	6.6e-45	34.1

DBSCAN-SWA_114

1559360 : 1565639

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000857614.1\|1559360_1561034_-	amino acid ABC transporter ATP-binding/permease protein	W8CYL7	Bacillus_phage	2.6e-11	23.6
WP_000737156.1\|1561030_1562662_-	ABC transporter ATP-binding protein/permease	W5SAS9	Pithovirus	5.7e-11	27.8
WP_000469897.1\|1562880_1563756_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000358501.1\|1563926_1564610_+	hypothetical protein	NA	NA	NA	NA
WP_000148822.1\|1564612_1565071_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_000820892.1\|1565072_1565639_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.1e-21	36.9

DBSCAN-SWA_115

1572906 : 1573380

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833479.1\|1572906_1573380_-	cupin	A0A291AU44	Pandoravirus	1.6e-14	39.4

DBSCAN-SWA_116

1578643 : 1579441

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000731644.1\|1578643_1579441_+	LysM peptidoglycan-binding domain-containing protein	A0A223LD43	Bacillus_phage	1.2e-06	30.2

DBSCAN-SWA_117

1584270 : 1585032

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000985996.1\|1584270_1585032_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-33	34.8

DBSCAN-SWA_118

1589406 : 1590450

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030774.1\|1589406_1590450_-	alpha/beta hydrolase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	4.4e-17	28.0

DBSCAN-SWA_119

1596973 : 1597771

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001080809.1\|1596973_1597771_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	30.7

DBSCAN-SWA_120

1600998 : 1604957

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000817960.1\|1600998_1602726_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-110	43.3
WP_000793062.1\|1603146_1604442_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-14	26.9
WP_000832260.1\|1604558_1604957_-	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	3.2e-16	39.9

DBSCAN-SWA_121

1611891 : 1612635

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894464.1\|1611891_1612635_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.2e-11	29.7

DBSCAN-SWA_122

1623586 : 1624147

Streptococcus_phage(100.0%)

integrase

attL 1617740:1617754|attR 1627738:1627752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1617740:1617754	attL	NA	NA	NA	NA
WP_001044917.1\|1623586_1624147_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5S9C2	Streptococcus_phage	1.1e-19	35.4
WP_001044917.1\|1623586_1624147_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5S9C2	Streptococcus_phage	1.1e-19	35.4
1627738:1627752	attR	NA	NA	NA	NA

DBSCAN-SWA_123

1637100 : 1640454

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001200748.1\|1637100_1638111_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	5.6e-33	27.3
WP_001788287.1\|1638609_1639131_-	hypothetical protein	NA	NA	NA	NA
WP_000180234.1\|1639158_1640454_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.2e-24	27.9

DBSCAN-SWA_124

1650823 : 1652146

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000860593.1\|1650823_1652146_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	9.1e-108	46.6

DBSCAN-SWA_125

1663447 : 1664104

Elephant_endotheliotropic_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455258.1\|1663447_1664104_-	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	6.4e-46	46.4

DBSCAN-SWA_126

1667772 : 1671093

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100844.1\|1667772_1669149_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	5.7e-20	24.1
WP_000347074.1\|1669692_1671093_-	MFS transporter	Q6JIH2	Burkholderia_virus	1.6e-54	32.8

DBSCAN-SWA_127

1677352 : 1682346

Staphylococcus_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|1677352_1678999_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1
WP_001106109.1\|1679259_1680750_+	glycosyltransferase	NA	NA	NA	NA
WP_001106712.1\|1680873_1682346_-	glycosyltransferase	A0A1V0SGA9	Hokovirus	5.5e-05	23.3

DBSCAN-SWA_128

1696761 : 1697424

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067259.1\|1696761_1697424_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	3.1e-24	36.9

DBSCAN-SWA_129

1703999 : 1705187

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000250828.1\|1703999_1705187_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	8.8e-46	30.8

DBSCAN-SWA_130

1708215 : 1719169

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090315.1\|1708215_1710297_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.7e-66	28.3
WP_001137495.1\|1710419_1710890_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_001142337.1\|1710955_1711369_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_000031892.1\|1711466_1711721_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_001819727.1\|1711857_1715454_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	4.3e-67	24.6
WP_000918667.1\|1715617_1719169_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.1e-50	24.3

DBSCAN-SWA_131

1722852 : 1727635

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288302.1\|1722852_1723401_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	8.6e-12	33.5
WP_001074473.1\|1723413_1723596_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001788193.1\|1723651_1723795_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000872872.1\|1723909_1724479_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_000664738.1\|1724559_1725084_-	NYN domain-containing protein	NA	NA	NA	NA
WP_000390339.1\|1725083_1725830_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000370186.1\|1725837_1726242_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_000631977.1\|1726234_1727635_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	5.5e-55	32.0

DBSCAN-SWA_132

1733647 : 1736104

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000897132.1\|1733647_1736104_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1C3S747	Escherichia_phage	1.4e-133	41.2

DBSCAN-SWA_133

1755016 : 1765302

Catovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288207.1\|1755016_1756504_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	7.8e-92	40.9
WP_001790128.1\|1756556_1756649_-	hypothetical protein	NA	NA	NA	NA
WP_000613718.1\|1757041_1757518_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_001154302.1\|1757514_1757880_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000167940.1\|1757857_1758661_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	8.7e-21	30.8
WP_000057594.1\|1758876_1759809_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.7e-108	65.7
WP_000148605.1\|1759987_1760869_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_001167888.1\|1761111_1763205_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQ50	Micromonas_sp._RCC1109_virus	4.0e-110	42.7
WP_000551283.1\|1763462_1764002_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.5e-12	29.8
WP_001176711.1\|1764006_1765302_-\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SI91	Klosneuvirus	4.8e-13	24.5

DBSCAN-SWA_134

1774558 : 1777884

Hokovirus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000933774.1\|1774558_1775524_-	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	6.1e-45	35.4
WP_001252528.1\|1775670_1777023_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	8.3e-24	30.4
WP_000093393.1\|1777398_1777884_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4

DBSCAN-SWA_135

1783646 : 1786744

Hokovirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150344397.1\|1783646_1785620_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	3.2e-93	32.6
WP_000279919.1\|1785904_1786744_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-57	45.8

DBSCAN-SWA_136

1790650 : 1791268

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272126.1\|1790650_1791268_-	dTMP kinase	M1PSC7	Streptococcus_phage	9.2e-47	48.3

DBSCAN-SWA_137

1800121 : 1801819

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001109053.1\|1800121_1801819_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	4.3e-54	42.1

DBSCAN-SWA_138

1818469 : 1824709

Lactobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001170262.1\|1818469_1819474_-	autolysin/adhesin Aaa	A0A0A7NU10	Lactobacillus_phage	1.2e-24	41.5
WP_000825529.1\|1819805_1820648_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_000467994.1\|1820684_1821344_-	ABC transporter permease	NA	NA	NA	NA
WP_000569285.1\|1821347_1822373_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	36.8
WP_001036653.1\|1822668_1823811_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA
WP_000634111.1\|1823803_1824709_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	2.5e-48	39.4

DBSCAN-SWA_139

1842328 : 1844375

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000777467.1\|1842328_1843621_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8
WP_001066124.1\|1843613_1844375_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2

DBSCAN-SWA_140

1850560 : 1853219

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000072559.1\|1850560_1851670_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	4.5e-68	43.9
WP_000028589.1\|1851662_1853219_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.4e-285	95.9

DBSCAN-SWA_141

1862612 : 1863098

Lactococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000093393.1\|1862612_1863098_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4

DBSCAN-SWA_142

1874350 : 1877383

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000424963.1\|1874350_1875892_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	32.6
WP_000264071.1\|1875916_1877383_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5

DBSCAN-SWA_143

1886341 : 1887865

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000930507.1\|1886341_1887865_+	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	6.4e-41	33.9

DBSCAN-SWA_144

1895687 : 1906064

Staphylococcus_phage(42.86%)

transposase,integrase

attL 1890461:1890476|attR 1899134:1899149

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1890461:1890476	attL	NA	NA	NA	NA
WP_071665653.1\|1895687_1895921_+\|integrase	tyrosine-type recombinase/integrase	Q4ZE80	Staphylococcus_phage	7.8e-23	77.8
WP_078055966.1\|1896030_1896969_+	Abi family protein	NA	NA	NA	NA
WP_000897044.1\|1897234_1897477_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_000934799.1\|1897528_1898032_-	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_001261460.1\|1898052_1898349_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_001052486.1\|1898592_1898757_+	hypothetical protein	U3PCX8	Staphylococcus_phage	3.1e-18	76.5
WP_001066124.1\|1898812_1899574_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
1899134:1899149	attR	NA	NA	NA	NA
WP_000777467.1\|1899566_1900859_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8
WP_001218732.1\|1901074_1902172_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_000157348.1\|1902183_1902387_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_000373077.1\|1902416_1903298_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_014363379.1\|1903451_1904297_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	3.5e-12	33.8
WP_000655692.1\|1904960_1906064_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	3.9e-11	28.0

DBSCAN-SWA_145

1915985 : 1916828

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000209561.1\|1915985_1916828_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.0e-11	27.7

DBSCAN-SWA_146

1936795 : 1939530

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000280816.1\|1936795_1937818_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	8.8e-10	28.1
WP_001191930.1\|1937795_1938740_-	NAD-dependent deacetylase	NA	NA	NA	NA
WP_000449065.1\|1938729_1939530_-	protein-ADP-ribose hydrolase	A0A2K9L8X2	Tupanvirus	3.1e-42	43.0

DBSCAN-SWA_147

1957757 : 1958435

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000911020.1\|1957757_1958435_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-31	38.9

DBSCAN-SWA_148

1976625 : 1981074

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000549292.1\|1976625_1981074_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	1.7e-28	23.7

DBSCAN-SWA_149

1991679 : 1993342

Amsacta_moorei_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570070.1\|1991679_1992339_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	7.6e-23	37.2
WP_000736789.1\|1992391_1993342_-	glycine-glycine endopeptidase LytM	V5R8R0	Arthrobacter_phage	1.5e-16	42.7

DBSCAN-SWA_150

2002118 : 2003555

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000163992.1\|2002118_2003555_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	4.8e-30	25.8

DBSCAN-SWA_151

2007315 : 2011855

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000925394.1\|2007315_2009055_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.5e-62	31.5
WP_000608828.1\|2009315_2009990_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA
WP_000975351.1\|2010133_2011855_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.1e-11	37.4

DBSCAN-SWA_152

2021182 : 2022226

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000645592.1\|2021182_2022226_-	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	7.8e-14	24.9

DBSCAN-SWA_153

2029440 : 2030970

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000838207.1\|2029440_2030970_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	8.2e-12	49.4

DBSCAN-SWA_154

2039846 : 2041352

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001008406.1\|2039846_2041352_+	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.5e-39	25.9

DBSCAN-SWA_155

2052556 : 2057915

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894660.1\|2052556_2054806_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.7e-186	45.1
WP_000837101.1\|2055393_2056362_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000127984.1\|2056358_2057915_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.8e-13	27.2

DBSCAN-SWA_156

2068229 : 2070289

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000818914.1\|2068229_2069327_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.4e-24	35.6
WP_000166908.1\|2069710_2070289_-	M23 family metallopeptidase	A0A1Q1PW35	Staphylococcus_phage	8.7e-15	39.0

DBSCAN-SWA_157

2078589 : 2080182

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000067354.1\|2078589_2080182_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-22	34.1

DBSCAN-SWA_158

2096842 : 2098027

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001084449.1\|2096842_2098027_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.8e-35	29.4

DBSCAN-SWA_159

2102884 : 2110060

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000605285.1\|2102884_2110060_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.3e-67	29.9

DBSCAN-SWA_160

2115173 : 2118170

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000590858.1\|2115173_2115914_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-38	40.6
WP_000171922.1\|2116255_2116768_-	DUF4242 domain-containing protein	NA	NA	NA	NA
WP_000356963.1\|2116946_2117150_+	hypothetical protein	NA	NA	NA	NA
WP_001013483.1\|2117210_2118170_-	cation transporter	A0A1V0SED0	Indivirus	8.8e-12	34.2

DBSCAN-SWA_161

2121509 : 2123994

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723443.1\|2121509_2122655_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	5.4e-24	26.1
WP_000779512.1\|2122731_2123994_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	3.3e-22	25.8

DBSCAN-SWA_162

2131011 : 2137576

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413171.1\|2131011_2132136_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	6.7e-128	59.6
WP_001028285.1\|2132139_2133249_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_000459065.1\|2133261_2134290_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.0e-41	35.3
WP_000940777.1\|2134279_2136103_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	5.2e-29	29.1
WP_000565290.1\|2136122_2136887_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_000037326.1\|2136889_2137576_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	3.7e-28	36.1

DBSCAN-SWA_163

2141600 : 2142776

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000469827.1\|2141600_2142776_-	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	2.3e-30	28.1

DBSCAN-SWA_164

2148234 : 2149008

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078092.1\|2148234_2149008_+	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-13	26.1

DBSCAN-SWA_165

2156190 : 2156790

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000874684.1\|2156190_2156790_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	2.2e-53	50.2

DBSCAN-SWA_166

2161727 : 2162708

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078065132.1\|2161727_2162708_-	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	1.3e-47	37.0

DBSCAN-SWA_167

2166266 : 2167469

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223705.1\|2166266_2167469_-	staphyloferrin B biosynthesis decarboxylase SbnH	A0A2K9L4I2	Tupanvirus	3.9e-09	21.1

DBSCAN-SWA_168

2175735 : 2179945

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570804.1\|2175735_2176716_-	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	2.7e-40	35.6
WP_001045111.1\|2176946_2177939_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA
WP_000924997.1\|2177954_2178950_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA
WP_000136629.1\|2178946_2179945_+	staphyloferrin B ABC transporter permease subunit SirC	A0A2H4IY97	uncultured_Caudovirales_phage	2.0e-14	27.5

DBSCAN-SWA_169

2195577 : 2197224

Staphylococcus_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|2195577_2197224_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1

DBSCAN-SWA_170

2206529 : 2208576

Lactococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066124.1\|2206529_2207291_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
WP_000777467.1\|2207283_2208576_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8

DBSCAN-SWA_171

2223173 : 2224688

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000627204.1\|2223173_2224688_-	protein kinase	A0A0G2YBE6	Acanthamoeba_polyphaga_mimivirus	6.2e-12	27.4

DBSCAN-SWA_172

2228248 : 2231248

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000815640.1\|2228248_2229598_+	recombinase family protein	Q9T200	Bacillus_phage	1.4e-18	24.8
WP_001186608.1\|2229619_2231248_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	5.4e-46	31.4

DBSCAN-SWA_173

2240588 : 2241263

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001106057.1\|2240588_2241263_+\|transposase	IS6-like element IS257 family transposase	A0A0N9RU54	Staphylococcus_phage	2.6e-127	99.1

DBSCAN-SWA_174

2246906 : 2256910

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088649.1\|2246906_2247707_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	1.0e-37	35.9
WP_001104161.1\|2248094_2248883_-	hypothetical protein	NA	NA	NA	NA
WP_001060149.1\|2248883_2250218_-	hypothetical protein	NA	NA	NA	NA
WP_000871607.1\|2250210_2252037_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
WP_000101976.1\|2252049_2252751_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-42	39.2
WP_000095328.1\|2253947_2255231_-	adenylosuccinate synthase	L7Y4J5	Megavirus	1.8e-68	34.6
WP_000375647.1\|2255509_2256910_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.4e-111	48.1

DBSCAN-SWA_175

2263596 : 2272632

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000884334.1\|2263596_2264883_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.7e-88	51.2
WP_000177463.1\|2265260_2266775_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	3.0e-91	38.6
WP_000449218.1\|2267100_2267913_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_150344401.1\|2268000_2270661_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.3e-118	35.8
WP_000255586.1\|2270697_2272632_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	5.7e-143	44.9

DBSCAN-SWA_176

2282719 : 2286132

Faecalibacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000742837.1\|2282719_2283559_+	nucleoid occlusion protein	A0A2K9V477	Faecalibacterium_phage	2.2e-06	23.8
WP_000491384.1\|2284168_2284522_+	DUF3147 family protein	NA	NA	NA	NA
WP_000779135.1\|2284589_2284985_+	DUF3147 family protein	NA	NA	NA	NA
WP_001054123.1\|2285235_2285805_+	helix-turn-helix transcriptional regulator	D2XQ11	Bacillus_virus	6.2e-05	33.3
WP_001059079.1\|2285931_2286132_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-19	69.8

DBSCAN-SWA_177

2290429 : 2291188

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154165.1\|2290429_2291188_-	peptide resistance ABC transporter ATP-binding subunit VraD	G9BWD6	Planktothrix_phage	1.0e-34	39.0

DBSCAN-SWA_178

2305616 : 2307329

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000138662.1\|2305616_2307329_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-19	31.5

DBSCAN-SWA_179

2312965 : 2313979

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000639176.1\|2312965_2313979_+	histidinol-phosphate aminotransferase family protein	A0A1X7QHI1	Faustovirus	5.3e-07	25.4

DBSCAN-SWA_180

2326910 : 2327603

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185863.1\|2326910_2327603_+	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	2.2e-28	38.0

DBSCAN-SWA_181

2357056 : 2358916

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001125615.1\|2357056_2358916_-	amidase domain-containing protein	A0A249Y0X5	Enterococcus_phage	9.7e-15	37.3

DBSCAN-SWA_182

2384757 : 2386508

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000143422.1\|2384757_2385645_+	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	3.3e-05	23.0
WP_000923775.1\|2385752_2386508_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-31	37.9

DBSCAN-SWA_183

2389938 : 2390436

Canarypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001065268.1\|2389938_2390436_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	1.8e-21	33.1

DBSCAN-SWA_184

2395472 : 2397856

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001071714.1\|2395472_2397323_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.6e-235	64.3
WP_000173331.1\|2397319_2397856_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	3.9e-41	48.0

DBSCAN-SWA_185

2402733 : 2412846

Klosneuvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000066521.1\|2402733_2404443_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	3.8e-58	32.3
WP_000011688.1\|2404722_2404935_+	hypothetical protein	NA	NA	NA	NA
WP_001028780.1\|2405214_2405658_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_001172340.1\|2405851_2407450_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	5.3e-78	36.8
WP_025174545.1\|2407509_2407839_-	hypothetical protein	NA	NA	NA	NA
WP_001130051.1\|2408134_2409631_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_001031407.1\|2409825_2410716_-	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	1.2e-07	29.2
WP_001237630.1\|2410838_2411255_-	hypothetical protein	NA	NA	NA	NA
WP_000030049.1\|2411508_2412846_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.8e-18	26.7

DBSCAN-SWA_186

2443188 : 2446970

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000751271.1\|2443188_2443890_+	lytic transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	6.8e-38	46.4
WP_000996742.1\|2444165_2444654_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000379824.1\|2445158_2446970_+	acetyltransferase	A0A1R3Y5Q6	Salmonella_virus	1.3e-35	31.5

DBSCAN-SWA_187

2455403 : 2459446

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161354.1\|2455403_2456402_+	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	5.9e-35	32.6
WP_086107283.1\|2456491_2456698_-	copper chaperone CopZ	NA	NA	NA	NA
WP_000024120.1\|2457037_2459446_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	7.6e-129	40.8

DBSCAN-SWA_188

2468686 : 2471679

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001063329.1\|2468686_2470795_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	4.1e-118	37.7
WP_000262593.1\|2471157_2471679_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	3.4e-26	41.7

DBSCAN-SWA_189

2479029 : 2485393

Yellowstone_lake_phycodnavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001062648.1\|2479029_2480769_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	3.5e-35	24.1
WP_000473671.1\|2481068_2483135_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	8.3e-07	43.3
WP_000206030.1\|2483495_2483906_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000240662.1\|2483947_2484292_+	thioredoxin family protein	NA	NA	NA	NA
WP_001228163.1\|2484424_2485393_+	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	4.0e-12	26.5

DBSCAN-SWA_190

2494687 : 2498292

Acanthocystis_turfacea_Chlorella_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161536.1\|2494687_2495680_-	D-lactate dehydrogenase	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	1.1e-36	31.5
WP_000069097.1\|2495949_2496609_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_000863974.1\|2496740_2497547_-	VOC family protein	NA	NA	NA	NA
WP_000093393.1\|2497806_2498292_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4

DBSCAN-SWA_191

2505497 : 2507144

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038412683.1\|2505497_2507144_+\|transposase	IS1182 family transposase	A0A146ICT8	Staphylococcus_phage	8.2e-292	99.3

DBSCAN-SWA_192

2512726 : 2513422

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000382894.1\|2512726_2513422_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	6.8e-38	38.0

DBSCAN-SWA_193

2516975 : 2519022

Lactococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066124.1\|2516975_2517737_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-54	44.2
WP_000777467.1\|2517729_2519022_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	2.6e-14	30.8

DBSCAN-SWA_194

2534978 : 2535845

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000721337.1\|2534978_2535845_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.4e-79	52.9

DBSCAN-SWA_195

2545561 : 2547199

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000356869.1\|2545561_2547199_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	4.4e-96	38.1

DBSCAN-SWA_196

2559487 : 2560183

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000217461.1\|2559487_2560183_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	8.6e-09	36.5

DBSCAN-SWA_197

2565382 : 2566201

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824935.1\|2565382_2566201_+	SDR family oxidoreductase	L7RG25	Acanthamoeba_polyphaga_moumouvirus	8.3e-11	26.7

DBSCAN-SWA_198

2574071 : 2575629

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000173873.1\|2574071_2574887_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.6e-14	29.8
WP_000590515.1\|2574879_2575629_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-21	31.2

DBSCAN-SWA_199

2581998 : 2586425

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000923515.1\|2581998_2582661_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.2e-17	34.5
WP_000072152.1\|2582653_2583430_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_000026185.1\|2583823_2585011_+	MFS transporter	NA	NA	NA	NA
WP_000700919.1\|2585072_2586425_-	carboxylesterase/lipase family protein	A0A0B5J865	Pandoravirus	2.5e-12	34.2

DBSCAN-SWA_200

2589818 : 2591045

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948987.1\|2589818_2591045_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-20	50.5

DBSCAN-SWA_201

2609425 : 2615631

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001176863.1\|2609425_2610568_-	glycerate kinase	W6LM47	Streptococcus_phage	5.3e-56	44.3
WP_000779353.1\|2610835_2611222_+	GtrA family protein	NA	NA	NA	NA
WP_000482647.1\|2611354_2611462_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_001064822.1\|2612109_2613873_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.8e-34	24.3
WP_000488493.1\|2613897_2615631_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.8e-32	26.0

DBSCAN-SWA_202

2619092 : 2624864

Staphylococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000971541.1\|2619092_2620208_+	pyridoxal phosphate-dependent aminotransferase family protein	V5LQ39	Emiliania_huxleyi_virus	3.2e-21	24.9
WP_000286874.1\|2620218_2620911_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_000200957.1\|2620921_2621389_+	hypothetical protein	NA	NA	NA	NA
WP_000783428.1\|2621440_2622418_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	A0A2H4PQH7	Staphylococcus_phage	7.1e-142	76.2
WP_000916705.1\|2622419_2623367_-	bi-component gamma-hemolysin HlgCB subunit C	A0A2I6PER8	Staphylococcus_phage	2.4e-139	77.8
WP_031845052.1\|2623934_2624864_-	bi-component gamma-hemolysin HlgAB subunit A	A0A2H4PQI5	Staphylococcus_phage	1.2e-119	70.7

DBSCAN-SWA_203

2632708 : 2633440

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000615464.1\|2632708_2633440_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.9e-25	34.7

DBSCAN-SWA_204

2650251 : 2651811

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692644.1\|2650251_2651811_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_205

2673152 : 2674187

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655978.1\|2673152_2674187_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.7e-16	26.2

DBSCAN-SWA_206

2684127 : 2690685

Staphylococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000340145.1\|2684127_2684856_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-27	33.2
WP_000372851.1\|2684989_2685553_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000793174.1\|2685730_2686186_-	DUF3021 domain-containing protein	NA	NA	NA	NA
WP_000977025.1\|2686182_2686626_-	response regulator transcription factor	NA	NA	NA	NA
WP_000477337.1\|2686788_2688162_-	heme sensor histidine kinase HssS	A0A1V0SGX0	Hokovirus	1.8e-13	29.8
WP_000249498.1\|2688154_2688829_-	DNA-binding heme response regulator HssR	W8CYM9	Bacillus_phage	3.6e-52	45.2
WP_000761404.1\|2688964_2690020_+	ABC transporter permease	NA	NA	NA	NA
WP_001229921.1\|2690019_2690685_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-36	37.9

DBSCAN-SWA_207

2695746 : 2701041

Staphylococcus_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277723.1\|2695746_2697393_-\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	1.6e-292	99.1
WP_000828571.1\|2697774_2698329_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000738244.1\|2698449_2699097_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000205257.1\|2699109_2701041_+	DHA2 family efflux MFS transporter permease subunit	A0A2H4PQR6	Staphylococcus_phage	9.4e-05	28.4

DBSCAN-SWA_208

2709673 : 2710573

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000524841.1\|2709673_2710573_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.7e-15	28.2

DBSCAN-SWA_209

2723748 : 2724630

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000730035.1\|2723748_2724630_+	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	1.1e-61	45.9

DBSCAN-SWA_210

2732508 : 2733144

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285450.1\|2732508_2733144_+	HAD family hydrolase	A7J6N1	Paramecium_bursaria_Chlorella_virus	1.6e-09	27.1

DBSCAN-SWA_211

2746154 : 2750546

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072460394.1\|2746154_2746793_+	autolysin	A0A1W6JQU5	Staphylococcus_phage	4.5e-36	47.4
WP_000684155.1\|2747515_2748640_+	NAD(P)-binding protein	A0A2K9L3K5	Tupanvirus	1.6e-12	22.8
WP_000417016.1\|2748731_2749685_-	2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-31	28.9
WP_000737705.1\|2750045_2750546_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	2.0e-07	39.3

DBSCAN-SWA_212

2754463 : 2755273

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000717388.1\|2754463_2755273_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	9.4e-07	41.3

DBSCAN-SWA_213

2774253 : 2774859

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000913006.1\|2774253_2774859_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.8e-13	30.6

DBSCAN-SWA_214

2786889 : 2790057

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000592327.1\|2786889_2790057_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	3.3e-63	21.9

DBSCAN-SWA_215

2813650 : 2815317

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000389659.1\|2813650_2814460_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	7.4e-20	29.1
WP_000155389.1\|2814456_2815317_+	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	9.7e-10	23.9

DBSCAN-SWA_216

2818358 : 2823250

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000204273.1\|2818358_2819795_+	MarR family transcriptional regulator	A0A088F7M4	Mycobacterium_phage	6.0e-57	31.0
WP_000655237.1\|2820964_2821147_+	hypothetical protein	NA	NA	NA	NA
WP_000130153.1\|2821585_2823250_+	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.8e-44	25.8

DBSCAN-SWA_217

2830140 : 2832471

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001015494.1\|2830140_2830989_+	aldo/keto reductase	A0A1V0SDE7	Indivirus	4.1e-37	34.6
WP_000875477.1\|2831221_2831425_+	hypothetical protein	NA	NA	NA	NA
WP_078090911.1\|2831730_2832471_-	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	5.6e-14	29.4

DBSCAN-SWA_218

2839466 : 2847681

Staphylococcus_phage(100.0%)

integrase

attL 2830887:2830899|attR 2841367:2841379

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2830887:2830899	attL	NA	NA	NA	NA
WP_000264751.1\|2839466_2840672_-\|integrase	site-specific integrase	A0A2I6PEN0	Staphylococcus_phage	7.7e-223	100.0
WP_000191466.1\|2840797_2841412_+	hypothetical protein	A0A2I6PEZ0	Staphylococcus_phage	6.7e-106	100.0
2841367:2841379	attR	NA	NA	NA	NA
WP_001795334.1\|2841408_2841555_-	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.2e-16	100.0
WP_000449655.1\|2841645_2842041_-	hypothetical protein	A0A2I6PEJ7	Staphylococcus_phage	3.8e-70	100.0
WP_000755718.1\|2842069_2842504_-	hypothetical protein	A0A2I6PEM0	Staphylococcus_phage	1.2e-24	100.0
WP_000525000.1\|2842521_2842983_-	hypothetical protein	A0A2I6PEK4	Staphylococcus_phage	1.3e-85	99.3
WP_000429766.1\|2842995_2843325_-	helix-turn-helix transcriptional regulator	A0A2I6PEN2	Staphylococcus_phage	3.2e-54	100.0
WP_001115060.1\|2843485_2843677_+	helix-turn-helix transcriptional regulator	A0A2I6PEL6	Staphylococcus_phage	2.3e-28	100.0
WP_001548903.1\|2843933_2844173_-	hypothetical protein	A0A2I6PE22	Staphylococcus_phage	6.7e-38	100.0
WP_001036299.1\|2844219_2844435_+	hypothetical protein	A0A2I6PEK7	Staphylococcus_phage	1.0e-32	100.0
WP_001124198.1\|2844459_2844723_+	helix-turn-helix domain-containing protein	A0A2I6PEL8	Staphylococcus_phage	2.5e-46	100.0
WP_001285951.1\|2844734_2844896_+	DUF1270 domain-containing protein	A0A2I6PEK6	Staphylococcus_phage	1.1e-20	100.0
WP_016060011.1\|2844988_2845318_+	hypothetical protein	I1W611	Staphylococcus_phage	2.0e-32	100.0
WP_031786849.1\|2845298_2845559_+	DUF1108 family protein	I1W613	Staphylococcus_phage	3.4e-43	100.0
WP_000985979.1\|2845572_2845935_+	hypothetical protein	A0A2I6PEM7	Staphylococcus_phage	3.7e-56	100.0
WP_150344410.1\|2845931_2847098_+	DUF2800 domain-containing protein	A0A2I6PEL9	Staphylococcus_phage	4.1e-221	99.7
WP_000645048.1\|2847123_2847681_+	DUF2815 family protein	A0A2I6PEP8	Staphylococcus_phage	1.8e-97	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP044106.1|WP_001059079.1|2285931_2286132_-|cold-shock-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP044106.1|WP_001059079.1|2285931_2286132_-|cold-shock-protein

2285931_2286132_-

66 aa aa

2282719-2286132

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP044106_7	Unclear	7.1\|1470606\|32\|NZ_CP044106\|CRISPRCasFinder	1470606-1470637	32	2283816-2283847	2

1. spacer 7.1|1470606|32|NZ_CP044106|CRISPRCasFinder matches to NZ_CP044106 position: 2283816-2283847, mismatch: 2

ggcaatgcgagttggggtgtgggccccaacac	CRISPR spacer
ggcaatgcgagttggggtgagggccctaacac	Protospacer
******************* ******.*****

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP044105

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP044106

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information