CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP044120	Raoultella planticola strain S25 plasmid pS25-68, complete sequence	0 crisprs	RT	0	0	1	0
NZ_CP044121	Raoultella planticola strain S25 chromosome, complete genome	1 crisprs	cas3,WYL,PD-DExK,DEDDh,csa3,DinG,RT	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 66690

Escherichia_phage(25.93%)

integrase,transposase

attL 21200:21217|attR 38050:38067

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009483812.1\|77_329_-	hypothetical protein	NA	NA	NA	NA
WP_000776034.1\|486_918_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.6e-29	53.3
WP_004118291.1\|917_2189_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	4.9e-151	63.3
WP_012600007.1\|2270_3248_-	ParB/RepB/Spo0J family partition protein	Q38420	Escherichia_phage	2.6e-88	54.4
WP_000368714.1\|3244_4450_-	ParA family protein	A0A077SL49	Escherichia_phage	2.4e-163	69.6
WP_000339857.1\|4864_5134_+	hypothetical protein	NA	NA	NA	NA
WP_100115263.1\|5166_5364_-	hypothetical protein	NA	NA	NA	NA
WP_004118283.1\|5490_6357_-	replication initiation protein	A0A222YYK1	Escherichia_phage	1.5e-23	31.1
WP_000764642.1\|7124_7382_+	hypothetical protein	NA	NA	NA	NA
WP_000015958.1\|7439_8216_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
WP_000129823.1\|8212_8956_-	hypothetical protein	NA	NA	NA	NA
WP_000493378.1\|9006_9357_-	hypothetical protein	NA	NA	NA	NA
WP_032413492.1\|9981_11790_-	ATP-binding protein	NA	NA	NA	NA
WP_032621004.1\|11786_12833_-	hypothetical protein	NA	NA	NA	NA
WP_094686392.1\|14149_15331_+	DUF4268 domain-containing protein	NA	NA	NA	NA
WP_094686391.1\|16802_16997_-	hypothetical protein	NA	NA	NA	NA
WP_000807690.1\|16997_17753_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	4.5e-136	96.0
WP_000861580.1\|18750_18942_-	hypothetical protein	NA	NA	NA	NA
WP_001039463.1\|18950_19337_-	hypothetical protein	NA	NA	NA	NA
WP_071549086.1\|19893_20154_+	hypothetical protein	NA	NA	NA	NA
WP_020324562.1\|20099_20804_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	9.9e-138	99.6
WP_071549088.1\|20828_21341_+	restriction endonuclease	NA	NA	NA	NA
21200:21217	attL	NA	NA	NA	NA
WP_001749967.1\|21345_21552_+	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|21933_23367_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_004098817.1\|23400_24615_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_024139167.1\|24621_24834_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|24875_25640_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001297012.1\|25727_25841_+	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|26146_26647_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001993321.1\|26665_26845_+	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|26774_27614_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|27607_27955_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001749994.1\|28185_28830_+	quinolone resistance pentapeptide repeat protein QnrB6	NA	NA	NA	NA
WP_001749993.1\|28921_29830_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	2.5e-77	52.3
WP_000050481.1\|30294_31836_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000259031.1\|32240_33080_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|33073_33421_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001749984.1\|33537_34383_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16	NA	NA	NA	NA
WP_001749985.1\|34563_35037_-	trimethoprim-resistant dihydrofolate reductase DfrA27	G3MBI7	Bacillus_virus	1.4e-15	29.1
WP_001749986.1\|35169_35622_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_063840321.1\|35718_36273_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_000845048.1\|36564_37578_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015344971.1\|37546_37831_+	hypothetical protein	NA	NA	NA	NA
WP_001749988.1\|37970_38540_+	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
38050:38067	attR	NA	NA	NA	NA
WP_004201235.1\|39296_40766_+	HNH endonuclease	G0X580	Salmonella_phage	5.5e-21	51.3
WP_004201234.1\|41285_42023_-	hypothetical protein	NA	NA	NA	NA
WP_004201232.1\|42160_42847_-	NYN domain-containing protein	NA	NA	NA	NA
WP_150340981.1\|43339_44110_-	hypothetical protein	NA	NA	NA	NA
WP_000842134.1\|45940_47050_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	2.8e-33	30.2
WP_108996614.1\|47144_48329_-	tetracycline efflux MFS transporter Tet(D)	NA	NA	NA	NA
WP_000113282.1\|48424_49081_+	tetracycline resistance transcriptional repressor TetR(D)	NA	NA	NA	NA
WP_001067855.1\|49092_49797_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001550559.1\|49830_50322_-	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|50428_51166_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|51162_51387_+	hypothetical protein	NA	NA	NA	NA
WP_000214122.1\|51660_52875_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001447541.1\|53091_53976_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_001067784.1\|54900_55605_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_046788546.1\|55689_56091_-	hypothetical protein	NA	NA	NA	NA
WP_015344976.1\|56099_59051_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
WP_000147567.1\|59053_59614_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000993245.1\|59739_59952_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001446012.1\|59914_60034_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|60017_60254_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|60250_60616_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|60633_62319_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|62357_62783_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|62810_63086_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_004200999.1\|63101_63467_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|63538_63994_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001776119.1\|64253_64781_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.7e-21	39.5
WP_001776120.1\|64813_65245_-	hypothetical protein	NA	NA	NA	NA
WP_001776122.1\|65724_66690_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.6e-58	42.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP044121

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044121_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044121_1

5093258-5093477

Orphan

Consensus_repeat	Method
GCGCAACCGGGGAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP044121_1

>merge|NZ_CP044121|1|5093258-5093477|CRISPRCasFinder
GCGCAACCGGGGAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGGGGTAGAATGAGGTTACCCCGGTAAACGCAGCGCAACCGGGAAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGGAGTAGAATGAGGTTACCCCGGTATGCGCAGCGCGACCGGGGAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGG

>NZ_CP044121|1|1|5093258-5093477|CRISPRCasFinder
GCGCAACCGGGGAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGG	GGTAGAATGAGGTTACCCCGGTAAACGCAGCGCAACCGGGAAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGGAGTAGAATGAGGTTACCCCGGTATGCGCA
GCGCGACCGGGGAAATCCCGGATGGCGGCGCGGGACGCCTTATCCGGGCTACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044121.1\|WP_131064246.1\|5082794_5084420_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP044121.1\|WP_032698180.1\|5081248_5082076_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP044121.1\|WP_032689511.1\|5082106_5082805_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP044121.1\|WP_032697249.1\|5094322_5095825_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP044121.1\|WP_032689503.1\|5090822_5093180_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP044121.1\|WP_150341532.1\|5104917_5105070_+\|glucose-uptake-inhibitor-SgrT	unknown	unknown	gnl\|CDD\|374203
NZ_CP044121.1\|WP_032689499.1\|5099607_5100309_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	unknown	unknown	gnl\|CDD\|182716
NZ_CP044121.1\|WP_032689573.1\|5098856_5099621_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP044121.1\|WP_032689505.1\|5087727_5090634_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP044121.1\|WP_032689502.1\|5093527_5094223_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP044121.1\|WP_032689506.1\|5087055_5087715_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP044121.1\|WP_150341531.1\|5100292_5101903_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	unknown	unknown	gnl\|CDD\|181853
NZ_CP044121.1\|WP_032689496.1\|5103174_5104830_-\|HTH-type-transcriptional-regulator-SgrR	unknown	unknown	gnl\|CDD\|184188
NZ_CP044121.1\|WP_004857813.1\|5097882_5098728_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP044121.1\|WP_032689512.1\|5077317_5078604_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP044121.1\|WP_046853104.1\|5101878_5102862_-\|thiamine-ABC-transporter-substrate-binding-subunit	unknown	unknown	gnl\|CDD\|236883
NZ_CP044121.1\|WP_032697244.1\|5086406_5086937_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP044121.1\|WP_150341530.1\|5095835_5097545_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP044121.1\|WP_015585172.1\|5078658_5081004_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP044121.1\|WP_131056379.1\|5084871_5086236_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030

Protein	Function_ID	Function_description	E-value
NZ_CP044121.1\|WP_131064246.1\|5082794_5084420_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.40308e-166
NZ_CP044121.1\|WP_032698180.1\|5081248_5082076_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	3.98071e-165
NZ_CP044121.1\|WP_032689511.1\|5082106_5082805_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.38223e-68
NZ_CP044121.1\|WP_032697249.1\|5094322_5095825_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP044121.1\|WP_032689503.1\|5090822_5093180_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP044121.1\|WP_150341532.1\|5104917_5105070_+\|glucose-uptake-inhibitor-SgrT	gnl\|CDD\|374203	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT.	1.78847e-05
NZ_CP044121.1\|WP_032689499.1\|5099607_5100309_-\|thiamine-ABC-transporter-ATP-binding-protein-ThiQ	gnl\|CDD\|182716	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ.	4.97425e-159
NZ_CP044121.1\|WP_032689573.1\|5098856_5099621_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	4.17811e-50
NZ_CP044121.1\|WP_032689505.1\|5087727_5090634_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP044121.1\|WP_032689502.1\|5093527_5094223_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.68914e-180
NZ_CP044121.1\|WP_032689506.1\|5087055_5087715_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	6.69884e-161
NZ_CP044121.1\|WP_150341531.1\|5100292_5101903_-\|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP	gnl\|CDD\|181853	PRK09433, thiP, thiamine transporter membrane protein; Reviewed.	0
NZ_CP044121.1\|WP_032689496.1\|5103174_5104830_-\|HTH-type-transcriptional-regulator-SgrR	gnl\|CDD\|184188	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR.	0
NZ_CP044121.1\|WP_004857813.1\|5097882_5098728_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP044121.1\|WP_032689512.1\|5077317_5078604_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP044121.1\|WP_046853104.1\|5101878_5102862_-\|thiamine-ABC-transporter-substrate-binding-subunit	gnl\|CDD\|236883	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional.	0
NZ_CP044121.1\|WP_032697244.1\|5086406_5086937_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	1.98373e-57
NZ_CP044121.1\|WP_150341530.1\|5095835_5097545_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP044121.1\|WP_015585172.1\|5078658_5081004_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP044121.1\|WP_131056379.1\|5084871_5086236_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	1.95248e-168

>NZ_CP044121.1|WP_032689503.1|5090822_5093180_-|DNA-polymerase-II
MTQPREGFLLTRHWRDTPQGTELSFWLATDDGPLQITLPPQESVAFIPEAQRAQAERLLQGENGQRLAPLSLKDFHRQPVFGLYCRAHRQLMRLEKKLRENGITVYEADIRPPERYLMERFITAPVWVEGDARGAQLVNARMKPNPHYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPATSPAVDFQLEYVSSRPQLLEKLNAWFAEHDPDVLIGWNVIQFDLRVLQKHAERYRIPLMLGRGNTELEWREHGFKQGVFFAQANGRLIIDGIEALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFNEDKPALATYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGEVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGMAQPDNAHSTEGFLGARFSRQSHCLPGIVGQIWHGRDDAKRHQNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIESQGYDVIYGDTDSTFVWLKRPHREEEATQIGRSLVAFVNDWWAAELSKDQLTSTLELEFETHFSRFLMPTIRGADTGSKKRYAGMIQEGEAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRHQPYRDYILETIAKLMSGELDDRLIYRKRLRRPLAEYQRNVPPHVRAARLADEQNVRLGRPQQYQQRGSIQYVWTTSGPEPVDYQLSPLDYEHYLSKQLQPVAEGILPFVDDDFATIVTGQLGLF
>NZ_CP044121.1|WP_032689505.1|5087727_5090634_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYARNDSPITRVMFNPGDTITSHEGWQLQVDEVNEENGLLAYTGTRLDTEETNVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLAGAAERVLIIVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMIVDEAHHLVWSEEAPSREYQAIEQLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDTELNTLGDLIGEQDIEPLLQAANSDRDDAQAARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLERTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHNELINYLAAPETSEGFDELIKACRQQHDALKAQLEQGRDRLLEIHSNGGEQAQKLAESIEEQDDDTNLIAFAMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFVTWEHPLIINGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGEAQVAKAAQALIDAARDEANDKLSAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP044121.1|WP_032689506.1|5087055_5087715_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRVQRDFPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWGHPEKAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYHVLEYADDNSARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAFGNAMTFRAPVDF
>NZ_CP044121.1|WP_032697244.1|5086406_5086937_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPARAGASVETELATKAQRAARQAEWLGHYQQPVIALTLVTPGVVKDSIRYRNMMGVALQACDQLLWKRRWKTLDRQVLWLPTGPEALWCVEHPASEVNALCTELLQTHPLGRLWNIEVICPQQGRQVQDEGTRRCLLCDDAAQTCESLHRHDAEEVVARVEQMIDGWFARD
>NZ_CP044121.1|WP_131056379.1|5084871_5086236_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLDPIDTPKATLKQRWWHVMDNMKVGIIPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPILGKLGAAAICATFIPSALVHYGLLPDVVVESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLRIFFPMLCGEIVGMLVGIGVGTALGMEPFQVFFFIVLPIMAGGVGEGAIPLSIGYAALMHMDQGVALGRVLPMVMLGSLTAIVIAGCLNQLGKRFPHLTGEGQLMPNRSNETHRTDDVETSGGKADVTTLASGALLAVLLYMLGMLGQKMTGLPAPVGMLFLAVLLKLVNGVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTITNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTSGNRMSLMPFAQIATRIGGAINVSLGLLFLSHFLA
>NZ_CP044121.1|WP_131064246.1|5082794_5084420_-|sensor-histidine-kinase
MKVSFQFKLFISLVAFFSVLFALLGVYYYIDASHQLYQEMSTRAKIQAEEIALMPDLRQQVIEEDPQSLTSFMQKIAARSDASFIVIGNAQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRRGGLGVSLRSKAPIFDPSGRVVGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIYEGVIVIDRHRRIEVINHAARSLLGLSQPARLLRGQSIDSVIAPQPFFASGEMLENDTHDELCRFNQLTVLASRVRIMLEESLQGWVITFRDRDEINSLSAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSRFSSPTLCGLLLGKAARAREKGVALSFDPACQLDRPLPSLIESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELMIEVADRGIGIDPAIRDHIFERGITTKTRGDHGIGLYLIEHYVTQAGGTIEVADNSPRGAIFTLFIPADGPVHSRHEANYAS
>NZ_CP044121.1|WP_032689511.1|5082106_5082805_-|response-regulator
MHHDLVDVLIIEDESELARLHAELIQKHPRMRLTGMAASLSQARQMLNSQPPQLILLDNYLPDGKGVTLMTDPILAEANCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFVQFYDQQREWKIVDQQNVDSLYQLQAKNYRADSGSKGIEEKTLALVQNLFNGREEHSFSVDEVVNDAGLSKTTARRYLEHCVEIGYLEVEMLYGKIGHPRRMYRRAQRAS
>NZ_CP044121.1|WP_032698180.1|5081248_5082076_+|co-chaperone-DjlA
MQYLGKIIGVAVALMMGAGFWGLVLGLLVGHIFDRARSRRINVFANQQERQALFFSTTFEVMGHLTKSKGRVTEADIHVASILMDRMNLHGESRTAAQQAFRVGKSDDYPLREKMRQLRSVCFGRFDLIRMFLEIQLQTAFADGELHPNEREVLFVIADELGISRAQFEQFLRMMQGGAQFGGGSQQGSYGQGGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQDIQKAWELIKEQRGF
>NZ_CP044121.1|WP_015585172.1|5078658_5081004_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYNRPLVEGQTNELPVTINADHAKGNYPDNAVFTGNVDINQGNSRLQADEVQLHQQQAAGQPQPVRTVDALGNVHYDDNQVILKGPKGWSNLNTKDTNIWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPVFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATLTPHYMSKRGGVMWENEFRYLTKAGAGLFEFDYLPSDKVYQDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFNRESSNSYAAQPQLDVNYYQNDVGPFDTHLYGQAVHFVNTNGNMPEATRVHFEPTINLPLSNGWGSINTEAKLLATHYQQSNLDNYNSTNNADLKESVNRVMPQFKVDGKMVFERDLQEGFTQTLEPRMQYLYIPYRDQSQIGSYDSTLLQSDYSGLFRDRTYSGLDRIASANQLTTGVTSRVYDSAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADNWGLRGGIQYDTRLDNVATGNGTVEYRRDENRLIQLNYRYASPEYIQATLPSYSTAEQYKNGISQVGMTASWPVVDRWSVVGAYYFDTNTRKSADQMLGVQYNSCCYAIRLGYERKINGWDSNGNGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQNSL
>NZ_CP044121.1|WP_032689512.1|5077317_5078604_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLLQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGMKITDDQVDQAIANIAKQNNMTMDQMRSRLAYDGLNYNTYRNQIRKEMLIAEVRNNEVRRRITVLPQEVESLAKQIGDQNDASTELNLSHILIPLTENPTSDDVAKAQEQANAIVEQARSGADFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDMRGGSKNISVTEVHARHILLKPSPIMNDDQARAKLEQIAADIKSGKTTFAKAAKEFSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSAPVHSSFGWHLIQLMDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP044121.1|WP_032689502.1|5093527_5094223_-|L-ribulose-5-phosphate-4-epimerase
MLEALKQQVLDANLALPKHNLVTLTWGNVSAVDRERGVLVIKPSGVDYSAMGADDMVVVSLESGEVVEGKKKPSSDTPTHRLLYQAFPSLGGIVHTHSRHATIWAQAGQAIPATGTTHADYFYGPVPCTRLMTDEEINGEYEWETGRVIVETFREQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP044121.1|WP_032697249.1|5094322_5095825_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPETLRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGMMVWLHTFSPAKMWINGLTILNKPLLQFHTQYNASLPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDQSAHQRIGSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISEGEISALVDEYESSYRLTPAAQIHGDKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATADKPILDVQPLGIGGKADPARLIFNTQTGPALVASLIDLGDRFRLLVNTVETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALTLDDMRQFAELQDIELAVIDNETRLPSFKDALRWNEVYYAAKR
>NZ_CP044121.1|WP_150341530.1|5095835_5097545_-|ribulokinase
MAIAIGLDFGSDSVRALAVECATGEELATSVEWYPRWQEGLFCDGPNNRFRHHPRDYIESMEAALKSVLALLSAEQRAGVVGIGVDSTGSTPAPIDADGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTRQDSAVAEAAASWIELCDWIPALLSGTTRPQGIRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINRHLSWPLFSDTWTADVPVGTLCAEWAQRLDLPETVILSGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKQSVGNRTVKGICGQVDGSVVPDFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQHPELKTQIAAQQKQLLPSLTEAWAKNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLVAATAFGARAIMECFTEQGIPVNNVMALGGIARKNPVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVHQDIPTAQHSMASEVESTLQPRPAQAQRFEQLYQRYQQWSVSAEQQYLPSAAKADKAPLSQAALTH
>NZ_CP044121.1|WP_004857813.1|5097882_5098728_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIDADGYLDFFIDRPLGMKGYILNLTVRGEGVINNHDEQFICRPGDILLFPPGEIHHYGRHPDAREWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFCELFGQIVEAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGISVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP044121.1|WP_032689573.1|5098856_5099621_+|DedA-family-protein
MQALLEHFITQSTVYSLIAVMLVAFLESLALVGLILPGTVMMAGLGALIGSGDVNFWQAWLAGIIGCLLGDWISFWLGWRFKKPLHRWSFMKKNKALLDKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPLAKFILPNIIGCLLWPPLYFLPGILAGAAIDIPTNEHSGSFKWLLLAAALLVWLAGWLCWRLWRSAKMRDRLTRLLPRSRLLWLTPVTVVLAGAALTLVIRHPLMPVYLDILHKVIAR
>NZ_CP044121.1|WP_032689499.1|5099607_5100309_-|thiamine-ABC-transporter-ATP-binding-protein-ThiQ
MLKLNDVTWLYQHLPMRFTLSVQQGERLAVLGPSGAGKSTLLNLIAGFLPPASGTILINDQPHTTTPPARRPVSMLFQENNLFHHLTVRQNIALGMHPGLKLNPAQTASLQTIAGQMSIDSLLDRLPGELSGGQRQRVALARCLVREQPVLLLDEPFSALDPALRQEMLTLVSDVCQRQHLTLLMVSHSVEDAARIAPRSLVVADGRIAWDGATETLLSGNSSASHLLGISAR
>NZ_CP044121.1|WP_150341531.1|5100292_5101903_-|thiamine/thiamine-pyrophosphate-ABC-transporter-permease-ThiP
MATRRQPLNIGWLAPGLTAAALLVAVALAAFLALWGSAPEASWRSIFSDSYLWHVIRFSFWQAFLSALFSVIPAIFLARALYRRRFPGRTLLLRLCAMTLILPVLVAVFGILSVYGRQGWLATLFNVVGWQWDFSPYGLQGILLAHVFFNMPMATRLLLQALENIPGEQRQIAAQLGMRGYHFFRLVEWPWLRRQIPPVAALIFMLCFASFATVLSLGGGPRATTIELAIYQALNFDYDPARAAMLALIQMVCCLGLVLLAQRLSKAVAIGTTQVHGWRDPDDRLHSRLSDTALIVLTLLLLLPPLLAVVVDGLNNNLLSVLAQPALWQAFCTSLRIAVSAGLLSVMLTMMLLWSSRELRLRKRPLAGQTLELSGMLILAMPGIVLATGFFLLLNNSIGLPASADGIVIFTNALMAIPYALKVLENPMRDIAVRYGMLCHSLGMSGFTRLRVIELRALKRPLAQALAFACVLSIGDFGAVALFGNEQFRTLPFYLYQQIGSYRSQDGAVTALLLLLLCFLLFTVIERLPGRDVKTE
>NZ_CP044121.1|WP_046853104.1|5101878_5102862_-|thiamine-ABC-transporter-substrate-binding-subunit
MLKKLLPLLALVAAPAFAKPVLTVYTYDSFSADWGPGPVVKKAFEADCNCELKFVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLEAATQSKLFAKSQVPASAVTVPGGWDNDTFVPFDYGYFAFVYDKNKLKNPPKSLKELVESDQKWRVIYEDPRTSTPGLGLLLWMQKVYGEQSPEAWQKLAAKTVTVTKGWSEAYGLFLKGESDLVLSYTTSPAYHIIEEKKDQYAAASFAEGHYLQVEVAARTAASKQPELAEKFLKFMVSPAFQNAIPTGNWMYPVTQVALPAGFETLPKPQTTLEYTPQQVAAERQNWINAWQRAVSR
>NZ_CP044121.1|WP_032689496.1|5103174_5104830_-|HTH-type-transcriptional-regulator-SgrR
MSSARLQQQFIRLWQCCEGKSQETTLNELAEMLCCSRRHMRTLLNMMEERGWLTWEAEAGRGKRSKLAFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAAVRQMLVSHLGRSFRQGRHILRVLYYRPMKNLLPGSALRRSENHIARQIFSALTRVNEENGELEADIAHHWQQLTPTHWRFFLRPGIHFHHGRELEMEDVIASLQRSNNLPLYSHIERIASPTAWTLDIHLTQPDRWLPWLLGQVSAVVLPREWQSMENFSAMPVGTGPYAVVRNNQNQLKIHAFDDYFGYRALIDEVNVWVLPEISEEPNGGLTLQGTTQSEKAVESRLEEGCYYLLFDARTPLGSNLAVRQWLSYLLQPANLLYHAGEQYQGNWFPAYGLLPRWHHARSHACEKPPGLESVTLTYYRDHVEHRVMGGIMATLLAEHQVKLEIQELEYEEWHRGEVVSDIWLNSANFTLPIDFSLFALLYEVPLIRHCIPVDWEQDARRWHAGELNPATWSQQLLANQTIVPLIHHWLMIQGQRSMRGVRMNTLGWFDFKSAWFAPPDP
>NZ_CP044121.1|WP_150341532.1|5104917_5105070_+|glucose-uptake-inhibitor-SgrT
MMRSTAEQFYQRYFSATQDASWLARLMAGRQQKILGELMQWGVTSQTSDH

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1700215 : 1749476

Enterobacteria_phage(28.57%)

terminase,head,lysis,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150341191.1\|1700215_1701157_-	hypothetical protein	H9YPX8	environmental_Halophage	4.6e-13	51.2
WP_150341192.1\|1703085_1705569_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	1.1e-199	45.8
WP_150341193.1\|1705555_1705951_-	NlpC/P60 family protein	F1C5F2	Cronobacter_phage	1.6e-39	57.1
WP_150341194.1\|1705947_1706418_-	hypothetical protein	A0A1W6DXV1	Salmonella_phage	3.1e-26	38.5
WP_150341583.1\|1706417_1706837_-	hypothetical protein	F1C5F0	Cronobacter_phage	2.9e-36	56.1
WP_071887212.1\|1707007_1707271_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_049264444.1\|1707250_1707430_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_150341195.1\|1707469_1710163_-	tape measure protein	A0A1B1W284	Salmonella_phage	5.2e-118	45.9
WP_127673709.1\|1710217_1710613_-	hypothetical protein	I6R0Q4	Salmonella_phage	4.0e-27	44.6
WP_150341196.1\|1710630_1711011_-	hypothetical protein	NA	NA	NA	NA
WP_150341197.1\|1711102_1711387_-	hypothetical protein	NA	NA	NA	NA
WP_104896059.1\|1711431_1711962_-	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	5.1e-86	89.1
WP_150341198.1\|1712177_1712891_-	hypothetical protein	G0ZNE7	Cronobacter_phage	2.5e-64	54.6
WP_088911441.1\|1712959_1713724_-	immunoglobulin domain-containing protein	G0ZNE6	Cronobacter_phage	7.4e-38	44.0
WP_088911440.1\|1713782_1714166_-	hypothetical protein	NA	NA	NA	NA
WP_088911439.1\|1714162_1714531_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.2e-46	78.7
WP_088911438.1\|1714533_1714896_-	hypothetical protein	G0ZNE2	Cronobacter_phage	6.2e-27	50.8
WP_088911437.1\|1714906_1715224_-	hypothetical protein	G8GWD9	Rhodobacter_phage	9.6e-32	62.0
WP_088911436.1\|1715216_1715390_-	50S ribosomal protein L13	Q5G8X7	Enterobacteria_phage	6.0e-12	50.9
WP_088911435.1\|1715389_1715770_-	hypothetical protein	F1C5E2	Cronobacter_phage	3.7e-30	56.9
WP_088911434.1\|1715772_1716141_-	hypothetical protein	NA	NA	NA	NA
WP_088911433.1\|1716150_1717227_-\|coat	phage coat protein	F1C5E1	Cronobacter_phage	1.6e-158	77.4
WP_088911432.1\|1717238_1717679_-	hypothetical protein	F1C5E0	Cronobacter_phage	4.4e-43	63.7
WP_088911431.1\|1717682_1719068_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	4.9e-165	63.8
WP_088911430.1\|1719120_1719864_-	hypothetical protein	NA	NA	NA	NA
WP_088911429.1\|1719902_1720901_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.0e-111	67.6
WP_088911428.1\|1720827_1722297_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	8.1e-150	56.3
WP_048294304.1\|1722309_1723608_-\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	3.0e-241	94.3
WP_088911427.1\|1723591_1724059_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	4.7e-59	74.5
WP_064386384.1\|1724090_1724738_-	hypothetical protein	I6S676	Salmonella_phage	6.2e-102	80.1
WP_064386385.1\|1725124_1725304_-	hypothetical protein	NA	NA	NA	NA
WP_088911426.1\|1725582_1725933_-	hypothetical protein	A0A0K2FIW3	Enterobacter_phage	2.9e-13	41.5
WP_064367593.1\|1725929_1726424_-	lysozyme	M9P0E5	Enterobacteria_phage	2.9e-83	89.6
WP_064367594.1\|1726401_1726626_-\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	6.3e-30	87.8
WP_088911425.1\|1727363_1728173_-	antitermination protein	M9NZB0	Enterobacteria_phage	9.4e-124	77.0
WP_088911423.1\|1728309_1728669_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	4.9e-40	62.9
WP_104897256.1\|1728665_1728962_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	3.2e-37	77.7
WP_104897248.1\|1728964_1729171_-	hypothetical protein	H6WRY8	Salmonella_phage	1.8e-23	72.7
WP_150341199.1\|1729170_1729770_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	9.8e-94	83.4
WP_088911448.1\|1729817_1730054_-	hypothetical protein	K7PHG9	Enterobacteria_phage	5.8e-26	65.4
WP_108452680.1\|1730541_1730811_-	hypothetical protein	H6WRY4	Salmonella_phage	1.5e-33	77.9
WP_150341584.1\|1730857_1731640_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	8.7e-50	83.0
WP_142523956.1\|1731864_1732380_-	hypothetical protein	G9L6B3	Escherichia_phage	1.1e-69	72.7
WP_150341200.1\|1732681_1732888_-	hypothetical protein	A0A1U8QWK2	Salmonella_phage	5.3e-07	63.6
WP_150341585.1\|1732884_1733553_-	hypothetical protein	Q5QF30	Pseudomonas_virus	7.9e-52	48.2
WP_150341201.1\|1733578_1733923_-	hypothetical protein	NA	NA	NA	NA
WP_150341202.1\|1734585_1734921_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.6e-13	41.0
WP_046852412.1\|1734913_1735627_-	Replication protein P	A0A0M3ULE2	Salmonella_phage	3.2e-67	56.7
WP_150341586.1\|1735623_1736481_-	hypothetical protein	K7PGZ0	Enterobacteria_phage	8.5e-91	65.1
WP_099144372.1\|1736615_1736876_-	hypothetical protein	NA	NA	NA	NA
WP_150341203.1\|1736886_1737423_-	hypothetical protein	K7PJT7	Enterobacteria_phage	6.5e-65	72.1
WP_041937615.1\|1737425_1737644_-	Rha family transcriptional regulator	K7PKS2	Enterobacteria_phage	2.2e-19	60.6
WP_150341204.1\|1737657_1738125_+	helix-turn-helix domain-containing protein	K7PHG0	Enterobacteria_phage	2.9e-61	78.1
WP_150341587.1\|1738294_1738663_+	hypothetical protein	K7PJT6	Enterobacteria_phage	2.7e-46	73.6
WP_150341205.1\|1738652_1739075_+	helix-turn-helix domain-containing protein	G8C7T9	Escherichia_phage	4.7e-42	63.4
WP_150341206.1\|1739061_1739463_+	hypothetical protein	G8C7T8	Escherichia_phage	1.8e-30	51.1
WP_150341207.1\|1739499_1739709_-	fumarate hydratase FumD	I6R0R9	Salmonella_phage	6.1e-27	88.4
WP_088912143.1\|1740195_1740387_+	DUF1482 family protein	NA	NA	NA	NA
WP_099843682.1\|1740395_1740554_+	hypothetical protein	K7P7H7	Enterobacteria_phage	3.2e-12	57.7
WP_150341208.1\|1740691_1743628_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	1.2e-296	59.1
WP_088912140.1\|1743641_1744730_+	recombinase RecT	H6WRX0	Salmonella_phage	1.3e-107	56.8
WP_088912139.1\|1744764_1745319_+	hypothetical protein	A0A141GF13	Brucella_phage	2.1e-34	46.1
WP_088912138.1\|1745315_1745624_+	hypothetical protein	I6PD68	Cronobacter_phage	4.2e-24	55.9
WP_088912137.1\|1745631_1745874_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	2.1e-23	71.4
WP_088912136.1\|1745926_1746208_+	excisionase family protein	A0A286S2A4	Klebsiella_phage	5.9e-17	56.3
WP_071359486.1\|1746244_1747525_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	1.1e-153	61.0
WP_150341209.1\|1747705_1748719_-	Zn-dependent oxidoreductase	NA	NA	NA	NA
WP_004862432.1\|1749149_1749476_-	YnfA family protein	A0A218MNG8	uncultured_virus	7.8e-21	53.5

DBSCAN-SWA_2

1930134 : 1941285

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150341232.1\|1930134_1932282_+	formate dehydrogenase subunit alpha	A0A077SK27	Escherichia_phage	8.0e-29	23.6
WP_032687266.1\|1932432_1932891_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	9.7e-17	37.7
WP_150341233.1\|1932936_1936152_-	molybdopterin-dependent oxidoreductase	A0A0P0IVM8	Acinetobacter_phage	1.7e-11	25.6
WP_150341234.1\|1936501_1937272_-	DeoR family transcriptional regulator	A0A077SK06	Escherichia_phage	2.3e-15	29.1
WP_032687263.1\|1937363_1937747_+	hypothetical protein	NA	NA	NA	NA
WP_032687262.1\|1937782_1938424_+	CatA-like O-acetyltransferase	NA	NA	NA	NA
WP_032687261.1\|1938403_1938829_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	3.6e-42	62.9
WP_032699610.1\|1938838_1940131_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.8e-162	69.8
WP_032697310.1\|1940176_1940497_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.9e-20	47.4
WP_032687258.1\|1940586_1941285_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.4e-83	65.1

DBSCAN-SWA_3

2515885 : 2523754

Enterobacteria_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015583926.1\|2515885_2516890_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	2.6e-30	29.1
WP_044350299.1\|2517274_2518441_-	UDP-glucose 6-dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	8.2e-113	54.5
WP_150341294.1\|2518642_2519197_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.1e-50	60.5
WP_150341295.1\|2519208_2520099_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.9e-30	34.9
WP_150341296.1\|2520131_2521001_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.1e-113	68.8
WP_150341297.1\|2521039_2522104_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.7e-104	54.1
WP_150341298.1\|2522347_2523754_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	6.6e-40	29.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP044120

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP044121

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection