CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023696	Streptomyces fradiae ATCC 10745 = DSM 40063 strain ATCC 10745 chromosome, complete genome	22 crisprs	DEDDh,WYL,cas4,csa3,cas3,DinG	8	16	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023696_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_1

479498-479603

Orphan

Consensus_repeat	Method
CCCCTCCCGGGCGCAGGCGGCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_1

>merge|NZ_CP023696|1|479498-479603|CRISPRCasFinder
CCCCTCCCGGGCGCAGGCGGCTCCCCTCCCGAAGCCGGCGCGCGCTCCTTCGGCTCCACTCGCACGCCAGGTGCGCGGCCATCCCCTCCCGGGCGCAGGCGGCTCC

>NZ_CP023696|1|1|479498-479603|CRISPRCasFinder
CCCCTCCCGGGCGCAGGCGGCTCC	CCTCCCGAAGCCGGCGCGCGCTCCTTCGGCTCCACTCGCACGCCAGGTGCGCGGCCAT
CCCCTCCCGGGCGCAGGCGGCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031132370.1\|488053_488578_+\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132374.1\|485998_486547_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP023696.1\|WP_031137151.1\|491694_492372_+\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP023696.1\|WP_031132383.1\|478636_479350_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP023696.1\|WP_037938078.1\|489692_490301_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP023696.1\|WP_031137149.1\|490573_491659_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|374209
NZ_CP023696.1\|WP_031132377.1\|481609_483007_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839507.1\|470798_473396_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|225461
NZ_CP023696.1\|WP_031132389.1\|476303_477089_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|238847
NZ_CP023696.1\|WP_031132379.1\|480761_481520_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP023696.1\|WP_078915642.1\|468479_469229_+\|two-pore-domain-potassium-channel-family-protein	unknown	unknown	gnl\|CDD\|369572
NZ_CP023696.1\|WP_078915641.1\|477279_477879_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|214900
NZ_CP023696.1\|WP_085921471.1\|469225_470644_+\|DUF2252-domain-containing-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP023696.1\|WP_031132391.1\|475274_476237_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP023696.1\|WP_031132368.1\|488795_489491_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP023696.1\|WP_031132372.1\|486964_487900_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320685
NZ_CP023696.1\|WP_078915640.1\|478015_478390_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP023696.1\|WP_031132381.1\|479685_480765_-\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|99748
NZ_CP023696.1\|WP_069975345.1\|473844_474558_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133399
NZ_CP023696.1\|WP_031132400.1\|467438_468074_-\|membrane-protein	unknown	unknown	gnl\|CDD\|225786

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031137151.1\|491694_492372_+\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	6.13559e-124
NZ_CP023696.1\|WP_031132374.1\|485998_486547_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.7671e-10
NZ_CP023696.1\|WP_031132383.1\|478636_479350_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	4.44514e-55
NZ_CP023696.1\|WP_037938078.1\|489692_490301_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.84404e-12
NZ_CP023696.1\|WP_031137149.1\|490573_491659_+\|glycosyl-hydrolase	gnl\|CDD\|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	1.22013e-05
NZ_CP023696.1\|WP_051839507.1\|470798_473396_-\|AAA-family-ATPase	gnl\|CDD\|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	3.00917e-76
NZ_CP023696.1\|WP_031132389.1\|476303_477089_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|238847	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.	1.21003e-78
NZ_CP023696.1\|WP_031132379.1\|480761_481520_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.42569e-21
NZ_CP023696.1\|WP_078915642.1\|468479_469229_+\|two-pore-domain-potassium-channel-family-protein	gnl\|CDD\|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	3.97217e-16
NZ_CP023696.1\|WP_078915641.1\|477279_477879_-\|flavin-reductase-family-protein	gnl\|CDD\|214900	smart00903, Flavin_Reduct, Flavin reductase like domain. This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology.	5.41617e-47
NZ_CP023696.1\|WP_085921471.1\|469225_470644_+\|DUF2252-domain-containing-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	1.163e-164
NZ_CP023696.1\|WP_031132391.1\|475274_476237_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	2.84447e-104
NZ_CP023696.1\|WP_031132368.1\|488795_489491_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	4.2234e-32
NZ_CP023696.1\|WP_031132372.1\|486964_487900_+\|M48-family-metalloprotease	gnl\|CDD\|320685	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	4.36421e-28
NZ_CP023696.1\|WP_078915640.1\|478015_478390_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	6.99005e-15
NZ_CP023696.1\|WP_031132381.1\|479685_480765_-\|low-specificity-L-threonine-aldolase	gnl\|CDD\|99748	cd06502, TA_like, Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.	4.74308e-133
NZ_CP023696.1\|WP_069975345.1\|473844_474558_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133399	cd04772, HTH_TioE_rpt1, First Helix-Turn-Helix DNA binding domain of the regulatory protein TioE. Putative helix-turn-helix (HTH) regulatory protein, TioE, and related proteins. TioE is part of the thiocoraline gene cluster, which is involved in the biosynthesis of the antitumor thiocoraline from the marine actinomycete, Micromonospora. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Proteins in this family are unique within the MerR superfamily in that they are composed of just two adjacent MerR-like N-terminal domains; this CD contains the N-terminal or first repeat (rpt1) of these tandem MerR-like domain proteins.	8.75671e-28
NZ_CP023696.1\|WP_031132400.1\|467438_468074_-\|membrane-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	6.60423e-20

>NZ_CP023696.1|WP_031132383.1|478636_479350_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MAELVYRPVIGAALTMFKALDLKIDIQGSENVPRTGGAVLVSNHISYLDFIFTGLAARPQKRLVRFMAKDSVFRHKISGPLMRGMKHIPVDRAQGEAAYRHALESLRSGEVIGVFPEATISQSFTLKGFKSGAARLAQEAGVPLVPMALWGTQRLWTKGRPRNFRRSHIPVTIRVGEPLEAPTDQYAGAITRRLRERVQELLEAAQRAYPVRPKDGDDTWWIPAHLGGTAPTPAELR
>NZ_CP023696.1|WP_078915640.1|478015_478390_-|thioredoxin-family-protein
MAVRESADAGGAGHGERVVGPGELGAALGRRATLVHFSTAFCQPCRATRRVLAGVADMVEGVAHVEVDAERNLALVRDLGVTATPTVLILDAAGREVRRATGQPRTADVVAALGRALETPADRP
>NZ_CP023696.1|WP_078915641.1|477279_477879_-|flavin-reductase-family-protein
MPEQPRPPDPRTHLRQKDNSMTVTHDLGAGAPGAPVVAGPELLRSAFRRHAAGVAVITAPGPAARGGRPAGFTASSLTSVSADPPLVSFGIGTGSSSWPAVAEAAHIGVHLLGEEQSALAATFARSGADRFAPPTRWTAGPEGVPVLDGVLAWLVCRVVGRVPAGDHRIVIAEVVAGDAAAREGRPLLYHHGRFNALRD
>NZ_CP023696.1|WP_031132389.1|476303_477089_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MSLRIVVCVKYVPDATGDRHFADDLTVDRDDVDGLLSELDEYAVEQALQIADEADDAEITVLTVGPEDAKDALRKALSMGADKAVHVEDDDLHGTDVMGTSLVLAKAIEKTGYDLVICGMASTDGVMGVLPAILAERLGVPQVTLLSEVSVEDGVVKGRRDGDAATEQLEASLPAVVSVTDQSGEARYPSFKGIMAAKKKPVESLDLDDLDIDADEVGLEGAWTKVDSAAERPARTAGTIVKDEGEGGKQLAQFLASQKFI
>NZ_CP023696.1|WP_031132391.1|475274_476237_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MAEVLVYVDHVDGAVRKPTLELLTLARRVGEPVAVALGPGAEATAATLAEHGATRVLTADAAEFADYLVVPKVDALQAAYESVSPAAVLVPSSAEGKEIAARLAVRIGSGIITDAIDIEAGDEGPVATQSVFAAAFTTKSRVSKGTPVITVKPNSAPVEAAPAAGAVEALAVSFSDKATGTKVVSRTPRESTGRPELTEAAIVVSGGRGVNGAENFALIEGLADSLGAAVGASRAAVDAGWYPHTSQVGQTGKSVSPQLYVATGISGAIQHRAGMQTSKTIVAINKDPEAPIFDLVDYGVVGDLFEVVPQLTDEIKSRKG
>NZ_CP023696.1|WP_069975345.1|473844_474558_-|MerR-family-transcriptional-regulator
MGDRLKAADLARSAGISVQQLRTYVDTGLLPPVERTPAGYRVFTDVHADALAVARRLAAGHGWATARTVMAAVHRGDVEAALAAVDAGHARLDRERAELAAVREAMGALPAGRLPAQGVPRHPLRIGEAARALGVKPPVLRLWEARGLLRPARDPVTGYRVYDPAELRLARIVALLRTGHHPLAAIEAVVREVRASGGTDRVADELDARAAALHRRSRERLGASAALDGYLRRLGHR
>NZ_CP023696.1|WP_051839507.1|470798_473396_-|AAA-family-ATPase
MRARFSLPSLPAGFLRRQRLAGHLDQALGTPLTLLNGPAGAGKTLLAADWAAGLRRPVAWLTTEAADRRPGVFWSYVLQALRASGVPLSPAVGTPADPGAVDRRLLAALAAELSEQTRPAVLVLDEYDRLPDPETAGQLEFVLHHAGPGLRLVLVGRTEPLLPLHRYRAAGELTEIRASELAFTPDEAALLLASHGLDLPDRAVRALVDRTRGWAAGLRLFALAARESDDPERYLKEFEAGSSTIADFLLAEVLKGQTEETQDLLLRVSVLERFRPELADALTLRSDAGPLLAGLCRANAFVERLGHTWYRLHPLFAEILRAHLRERLPGLEPELHRRAAAWFHRSGMLGETLGHGAAAGDWDLAASALVADLAIGRFFTGLHADDLAALFSRMGPEPATPAADLVRAARDLAGRETDQGLARLRRAGEPPGGGSDDAAARMSRALLEALAARLTGCPARGEEAAAEADATRPELPGRLLDAHPELTALQLTHLGSARLWAGRVEDAHAALTAAAGSPAATSTALPRKEALAHLALLDYLNGWPGRAERKALAAVSEAERAGLPQRAGSGLDRLVLAAVAVERHELDRARSLLDEAARHGCDPRDPVPTAGRALVAARLALADGAVRDAAETVRPPLSTVEPSPWAVGHEALVTAARHLAEGRPGEAAEGLRAVPADQPACVAEAAAIQLASGHAGAAADLLDGIRADGRTGPAVHVRTTLVRAGAAAEAGDEAAARALVRRALLDARRERLRRPFLDAGAWLGPLLAEAPLRELAEGWLAPGPPGRDRRGLPEPSPPPLAAVELSGRERDVLERLARMMSTEEIAADLFVSLNTVKTHLKSVYRKLAVNRRGDAVRRAHDLGLL
>NZ_CP023696.1|WP_085921471.1|469225_470644_+|DUF2252-domain-containing-protein
MTMTGGASEFTASLTPAERVARGREARRRVPRSGHAGYEPARGRPDPIDVLERQSADREADLVPIRYGRMLESPFRFYRGAAAIMAADLAALPRTGLGVQLCGDAHPLNFRLLASPERRLVFDVNDFDETLTGPFEWDVKRLAAGLVTAARANGFSAREQNRAVRACVGAYRARMRDLADMRTLDVWYAQDDAGWIRELLASSADREVRRRAARAAARARTRTHLRAYEKLTRVTDRGRRIAPDPPLIVPLDRLAAGHPAAVGREELLRGLLEGYARTLPPERRHLLRHYRLVDMARKVVGVGSVGTRCWVLLLLGKDDDDPLLLQAKEAQESVLAAHTDAERYGNQGRRVVTGQRLMQTTGDIFLGWTRVTGLDGRDRDFYVRQLWDWKGVARPETMGPDLFSLFGRLCGACLARAHARSGDPLAIAAYLGGGDRFDRALAEFAQVYADRNERDFEALGAAWRSGRITAER
>NZ_CP023696.1|WP_078915642.1|468479_469229_+|two-pore-domain-potassium-channel-family-protein
MGDPHTPGGGPGRPPEEGPGRGRAPAGAAGSRRRHRGSRSVLARALTLARAVFVATALVTAYYLLPLDQRGPSDIPVLVSGLVLVLLVFGWEVRAIARSPFPRLKAAEALGATLALFLILFASAYYLLDRSAPGSFSESLTRTDALYFALTTFSTTGFGDIAALSQTGRVLAMAQMTGGLLLVGVAAKVLANAVEAGLRRQGGGPPEHPLPAAHHTAGHTTAPEPPAPGTATGADTRPGTGGGAPEEEA
>NZ_CP023696.1|WP_031132400.1|467438_468074_-|membrane-protein
MPVSPGTAPHNGPEWGPTGAAPGSGGDPADVLARLGRSWTWLLGSAAVTLVPGVLILVWPEATLHVLAVVVGLYLLATGVFRLVSAFARPGHERLPGLLLAVLFVLAGVLCLRNPLQTIAALTLVVGAVWIVSGILTLYTALTAEDLPHRGVLIGVAALGIVAGVVVLALPVESARALTRLVGLWLVLLGLAEAGMALAWRSALRGASRRV
>NZ_CP023696.1|WP_031132381.1|479685_480765_-|low-specificity-L-threonine-aldolase
MTAAYPTRTDARRHHDPSVRGFASDNYAGAHPEVLAALALANGGHQIAYGEDDYTDHLQRVMHSHFGPTAEAFPVFNGTGANVTALQALADRWGAVICAESAHINVDEGGAPERMAGLKLLTVPTPDGKLTPELIDRQAFGWDDEHRAMPQVVSLAQNTELGTVYTPDEIRAIVDHAHGLGMKVHLDGARLANAAASLDVPMRAFTNAVGVDVVSLGGTKNGLLFGEALVVLNPEVGRHMRHLRKMSMQLASKMRFVSVQFEALLAKDLWLRSARHANAMARRLADGVRSVDGVEILYPVQANAVFARLPHDVSLRLQKRFRFYFWDEAAGDVRWMCSFDTTEDDVDAFLLALKEEMAR
>NZ_CP023696.1|WP_031132379.1|480761_481520_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTSNGNGGALDGAVIAVAGAAGPAGRAALLRLAEAGATVVAADADPERLAEAVDAARFAHGGATVTGETVDLLDLAATRDWAERTEQEFGRIDGLVHLVGGWRGGKTFAGTDLADWEVLERLLVRTVQHTSLAFQPGLARSDRGRYVLVSQSGASKPTEGNAAYAAAKSAAEAWTLALGDAFRKAGGEDGPNAAAAILVIKALVHDAMRAERPDAKFAGFTDVKDLADAIAGVWDRPAQEVNGQRLWLTPKP
>NZ_CP023696.1|WP_031132377.1|481609_483007_-|hypothetical-protein
MTEILVQDAVGGELSTDVRVVDHPAWPQLKNAVEEIRVWQSADGSIDFTAEDAPARTDADAVLDRIAAAVEQLSPLLPHGTDYHRALVADLRKWAAEGYGVPDFLDSLMAFHPAAERVDGRQHLVVFPMYTQNGNPDRNLEAVVLRMVWPEWLADLEATRYDNPLFCGITFEDFTSGYDTNSAVLFPETVAVREVPANFTWGGIFCDREAARFRRVTEAAVDVLGVELPADIKEMLGDQQRCQEAFVLWDMVHDRAHSHGDLPFDPFMIKQRQPFWMYGLEELRCDLTAFKEAVRLEAEGNPHGRDVQYAVLFDRMFRFPLTGDRVRNYDGLGGQLLFAYLHKHDVVRWTDNTLFIDWQRAPEVTNQLCAEIEKLYRDGIDRPKLVHWLAAYDLVSTYLAPHPGSRWAKGAEALDVHQPPRKLVDDVLADEFPLSMFFEALSKKLKSVIASTKGITAQDVEKAAA
>NZ_CP023696.1|WP_031132374.1|485998_486547_-|GNAT-family-N-acetyltransferase
MDTAPLQDARETYRDAVEADVPALVALVESAYRGDASRAGWTTEADLLDGQRTDPQGVREVIGAPGSRLLAVERDGELVACCQLERRGDAAYFGMFAVRPGLQGGGLGRRVLAEAERLAREEWGAREMHMTVISVRDELIAWYERRGYRRTGRTSPFPYGDERFGVPRREDLRFELLVKALG
>NZ_CP023696.1|WP_031132372.1|486964_487900_+|M48-family-metalloprotease
MWVSLALLALGVSLAVVAPRLLARADWPEREPIVALWVWQCVVAAVLLSFALSMTFSAAAAWQEVRGRVFATAPAGVVEAYALAALGPWSATLAVLLACGGLWTGAMLTREVRASRARRRRQRAELLVRVPQLPGEEAEAAPLVLLEGDRPGAWWLPGPRPQLIITTAALRRLKGRQLDAVLAHEQGHARARHDWLLYCAAALASGFPRVPVFAAFREEMHRLVELAADDSASKRFGRLTIALALVGLNEDRGVFGPCPTPHTEVPRRVTRLLTAEPRLTPGHRLRLTAAAALMPAAPLLLALAPGLTALG
>NZ_CP023696.1|WP_031132370.1|488053_488578_+|GNAT-family-N-acetyltransferase
MSWLPDDFVHPVLVPLPGGGHHLRPIREADAPLDYPAVMGSRERLWTLFGPAWGWPAATMTYEADRADLLRHEKEIAAHRSFNYALFDAAEAALLGCVYIDPPERAGADGEISWWVVDELVGSEVEQALDALVPRWIAADWPFEQPRFPGREISWSDWLALPEHPGTLLRPPPG
>NZ_CP023696.1|WP_031132368.1|488795_489491_+|phosphatase-PAP2-family-protein
MSSPPARLRSPLLPAVAVGCGAAAVLLLVLVAAGWAPLLAFDRAVADELHAAAVRRSALTEAMRVLTDWVWDPVTLRLLLAAAVVALWRTGRPGMAGLLVAAGLVAAGVQHLLKALVGRDRPRWPDPVDTADFAAFPSGHAMTAAVVCGLLWWVAARLGPRALARPVLVAGAVSTAGVGLTRVYLGVHWPSDVLGGWLLGACLVAVAVGAYERRATAAPRRPAALLGPGAR
>NZ_CP023696.1|WP_037938078.1|489692_490301_+|TetR/AcrR-family-transcriptional-regulator
MSPRSPSVNAELRRRSRERLLQATVELVAERGYEATTLGDIADRAGSARGLVSYYFPGKRQLLQSAVHRLMHMTLASALEREPRTDDGRERLARAIDAVLTLAVEQPLLMRTHMAGILQAEGFVRCPEQQRLAAILRDTMARYGSPDVDADYPLLRALLMGAVFAVLLPGAPMSPARLRAELFQRYGLDWESGRPPAEDGRR
>NZ_CP023696.1|WP_031137149.1|490573_491659_+|glycosyl-hydrolase
MTDVLLTVGTRKGLFTARRRGGDWTFDGPHFPAQAVYAIGIDLRRPAPRLLVGADSAHWGPSVFHSDDLGATWTEPGEAPVRFPKETGASLERLWQLHPAGPAAPGVVYAGTEPAALFRSEDEGETFELVRPLWEHPTRSRWQPGGGGEAVHTVVTDPRDPDAVTVAVSAAGVFRTRDGGASWAPSNEGVSAVFLPDPHPRFGQCVHKIAQDSGDPDRLYLQNHWGVYRSDDSGSTWTGIGAGLPSDFGFAAVAHPKHSGTAYVFPIEADTDRVPAGRRCRVYRTSDAGGSWEALSRGLPEEDHYGTVLRDAMCTDGADPAGLYFGNRNGELYASADDGESWRRLAAHLPDVLCVRAAVVG
>NZ_CP023696.1|WP_031137151.1|491694_492372_+|uracil-DNA-glycosylase
MAARPLKEIVEPGWADALAPVAERIAAMGDFLRAEIAAGRTYVPSGANVLRAFQQPFDEVKVLVVGQDPYPTPGHAVGLSFSVAPDVRPLPGSLENIFRELHSDLGLPRPSNGDLTPWTRQGVLLLNRALTTAPRKPGAHRGKGWEEVTEQAIRALVARGKPLVSVLWGRDARNLRPLLGDLPAVESAHPSPMSADRGFFGSRPFSRTNDLLLRQGAEPVDWRLP

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Crispr_ID: NZ_CP023696_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_2

887902-888055

Orphan

Consensus_repeat	Method
GGGCGGACCGTCCCCAGGGGCGGCGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023696_2

>merge|NZ_CP023696|2|887902-888055|CRISPRCasFinder
GGGCCCGCCCTCCACCGGGGCGCCGCCCGAGCGCGCACGCCTCCGGCGGCCGGCGGCACGCGCCGGGGCGCGGCCGGGCGGACCGTCCCCAGGGGCGGCGCGTCCCCCAGGGGCGGACCGTCCCCAGGGGCGGCGCGTCCCCCAGGGGCGGAGC

>NZ_CP023696|2|2|887902-888055|CRISPRCasFinder
GGGCCCGCCCTCCACCGGGGCGCCGC	CCGAGCGCGCACGCCTCCGGCGGCCGGCGGCACGCGCCGGGGCGCGGCC
GGGCGGACCGTCCCCAGGGGCGGCGC	GTCCCCCAGGGGCGGACCGTCCCCAGG
GGCGGCGCGTCCCCCAGGGGCGGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031131281.1\|880085_881528_-\|GuaB1-family-IMP-dehydrogenase-related-protein	unknown	unknown	gnl\|CDD\|181127
NZ_CP023696.1\|WP_031130477.1\|895135_895969_-\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234651
NZ_CP023696.1\|WP_010470436.1\|894467_894791_-\|integration-host-factor	unknown	unknown	gnl\|CDD\|223177
NZ_CP023696.1\|WP_051839284.1\|893822_894416_-\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP023696.1\|WP_031130481.1\|897187_900496_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP023696.1\|WP_031130469.1\|888118_890263_-\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|237844
NZ_CP023696.1\|WP_031130479.1\|895965_897087_-\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP023696.1\|WP_031131279.1\|881725_882739_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|367868
NZ_CP023696.1\|WP_031131275.1\|883685_885122_-\|rRNA-cytosine-C5-methyltransferase	unknown	unknown	gnl\|CDD\|237857
NZ_CP023696.1\|WP_031130474.1\|892174_893383_-\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP023696.1\|WP_031130467.1\|887052_887580_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031130483.1\|900488_901628_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP023696.1\|WP_031130465.1\|885538_886471_-\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP023696.1\|WP_031130472.1\|890705_891929_-\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|235374
NZ_CP023696.1\|WP_003982715.1\|893516_893789_-\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP023696.1\|WP_031134145.1\|878228_878606_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP023696.1\|WP_037938615.1\|876842_878186_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP023696.1\|WP_140160876.1\|875610_876846_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340411
NZ_CP023696.1\|WP_078915576.1\|879005_879887_-\|RNA-polymerase-sigma-factor-SigF	unknown	unknown	gnl\|CDD\|274373
NZ_CP023696.1\|WP_031131277.1\|882857_883541_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|235515

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031131275.1\|883685_885122_-\|rRNA-cytosine-C5-methyltransferase	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	1.02725e-91
NZ_CP023696.1\|WP_031130477.1\|895135_895969_-\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234651	PRK00125, pyrF, orotidine 5'-phosphate decarboxylase; Reviewed.	6.79076e-121
NZ_CP023696.1\|WP_010470436.1\|894467_894791_-\|integration-host-factor	gnl\|CDD\|223177	COG0099, RpsM, Ribosomal protein S13 [Translation, ribosomal structure and biogenesis].	1.74991e-05
NZ_CP023696.1\|WP_051839284.1\|893822_894416_-\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	6.03585e-104
NZ_CP023696.1\|WP_031130481.1\|897187_900496_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP023696.1\|WP_031130469.1\|888118_890263_-\|primosomal-protein-N'	gnl\|CDD\|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP023696.1\|WP_031130479.1\|895965_897087_-\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
NZ_CP023696.1\|WP_031131279.1\|881725_882739_-\|transcriptional-regulator	gnl\|CDD\|367868	pfam04198, Sugar-bind, Putative sugar-binding domain. This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. These proteins have an amino-terminal helix-turn-helix pfam00325 that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.	1.42973e-74
NZ_CP023696.1\|WP_031131281.1\|880085_881528_-\|GuaB1-family-IMP-dehydrogenase-related-protein	gnl\|CDD\|181127	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein.	0
NZ_CP023696.1\|WP_031130474.1\|892174_893383_-\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_CP023696.1\|WP_031130483.1\|900488_901628_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP023696.1\|WP_037938615.1\|876842_878186_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	8.89885e-30
NZ_CP023696.1\|WP_003982715.1\|893516_893789_-\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	4.70656e-18
NZ_CP023696.1\|WP_031134145.1\|878228_878606_+\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	3.76094e-16
NZ_CP023696.1\|WP_031130472.1\|890705_891929_-\|methionine-adenosyltransferase	gnl\|CDD\|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP023696.1\|WP_140160876.1\|875610_876846_+\|hypothetical-protein	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	0.000804924
NZ_CP023696.1\|WP_078915576.1\|879005_879887_-\|RNA-polymerase-sigma-factor-SigF	gnl\|CDD\|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	1.26801e-106
NZ_CP023696.1\|WP_031130465.1\|885538_886471_-\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	5.37822e-167
NZ_CP023696.1\|WP_031131277.1\|882857_883541_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	5.86229e-135

>NZ_CP023696.1|WP_031130467.1|887052_887580_+|hypothetical-protein
MADHATHDAQARASLHLLVRDIERVRRQVDALRTLTAQLGNVYRPRRSGPSTGFVVYGRAPAPTVRLAQELRDSVETLVTAAVDFDRSLGFSWDAVGSALGVTKQAVHRRYGSRRAAAQQAAGADRAAQPRTMPAPSVPAARSMPPQPSQARAAVRDQPHREGARPTVFPSPRNG
>NZ_CP023696.1|WP_031130465.1|885538_886471_-|methionyl-tRNA-formyltransferase
MKLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAGRGRRLVASPVAERAAEAGIEVLKPVKPRDEEFLARLREIGPDCCPVVAYGALLPKTALDIPAHGWVNLHFSLLPAWRGAAPVQHALMAGDEMTGASTFQIEEGLDSGPVYGVVTEEVRPTDTSGDLLTRLAFAGAGLLAATMDGIEDGTLRAVPQPAEGVTLAPKITVEDARVDWAAPAMRVDRVVRGCTPAPGAWTVFRGERLKLVQAAPAPGRTDLGPGELSAAKNNVYVGTGSHAVELLWVQAQGKKPMRAADWARGVRIAPGEHLGA
>NZ_CP023696.1|WP_031131275.1|883685_885122_-|rRNA-cytosine-C5-methyltransferase
MSEQGRRRPSKPYRRPRKDPVRVLAFEALRAVDERDAYANLVMPPLLRKAREQEGFDARDAALATELVYGTLRRQGTYDAIVAACVDRPLREVDPPVLDVLTLGAHQLLGTRIPPHAAVSSTVELARVVLGDGRAKFVNAVMRRIAEHDLDGWLERVAPPYDEDPEDHLAVVHAHPRWVVSALWDALGGGRAGIEDLLRADNERPEVTLVARPGRATPGELLDALGEGAAEPGRWSPYAVRLPEGGEPGAIDAVREGRAGVQDEGSQLVAAALAAAPLEGPDRRWLDGCAGPGGKAALLGALAARRGAALLAAEKQPHRARLVQRALDGNPGPYEVVAADGTRPPWRPGSFDRVLVDVPCSGLGALRRRPEARWRRRPEDLDAFAPLQRSLLAEALKSARVGGVVGYATCSPHLAETRAVVDDVLKGHGGARDVTAEWIDARPLLPGVPELGDGPDVQLWPHLHGTDAMYLALLRRTA
>NZ_CP023696.1|WP_031131277.1|882857_883541_-|ribulose-phosphate-3-epimerase
MAQINPSILSADFSRLAEEARAVEGADWLHVDVMDNHFVPNLTLGVPVVESLSRATGTPLDCHLMIEDPDRWAPQYVEAGAGSVTFHVEAAAAPVRLAREIRAKGARASMALKPATPIEPFEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTRELISKHGLELWLQVDGGVSASTVERCAEAGADVFVAGSAVYGANDPAAAVRSLRESAERATASAAWACGH
>NZ_CP023696.1|WP_031131279.1|881725_882739_-|transcriptional-regulator
MSAGRPALRMGPAELVQAAAMARRFYLEGKSKIQIAEEFGVSRFKVARVLETALERDLVRIEIRVPAELDAERSDALRARYGLRHAVVVESPPEGEDESPDPENLGEVAADLLGELVAEGDVLGLAWGRSTIHMAAALDRLPPCTVVQLTGVYDAGTAERGSVEAVRRAAQVSGGEAHPIYAPMLLPDPATAAALRNQTGIARAFEYFDKVTVAAVSIGSWEPGISTVHDMLSDEERAHYASLGVAAEMSAHLFDADGRRVGRDLGERCITVEADRLRRIPEVVAIAGGARKAAAIGAVLRSGLVTSLVTDTSAADYLLTESQPGPRPALERFDPDN
>NZ_CP023696.1|WP_031131281.1|880085_881528_-|GuaB1-family-IMP-dehydrogenase-related-protein
MRFLNDLKPPYDLTYDDVFMVPGRSAVGSRLAVDLATPDGTGTTIPLVVANMTAIAGRRMAETVARRGGLVVIPQDIPIDVVTDVVTWVKSRHHVLDTPIVLDPAQTVADALSLLSKRAHNAGVVVDADHKPVGVVTDRDLTGVDRFTQLSEVMSKDLLLLDADIDPIEAFNTLDHHNRRYAPAVDGEGRLAGILTRKGALRATLYTPAVDDRGRLRIAAAVGINGDVAGKAKQLLDAGVDTLVIDTAHGHQESMVNAIRVVRGLDPRVPIVAGNIVAAEGVRDLVEAGADIVKVGVGPGAMCTTRMMTGVGRPQFSAVLECAAEARRYGKHVWADGGVRHPRDVAMALAAGASNVMIGSWFAGTYESPGDLQQDADGRLYKESFGMASARAVRNRTSEESAYDRARKALFEEGISTSRMYLDPARPGVEDLIDSIVAGVRSSCTYAGAASLEEFAEKAVVGVQSAAGYAEGKPLHSSWN
>NZ_CP023696.1|WP_078915576.1|879005_879887_-|RNA-polymerase-sigma-factor-SigF
MPRRRESNVSTAITTPTETTAPAPATPLPRVPDPTEVAPRDAKELSKQFFARLAVLEEGTEEYQYVRNTLIELNLSLVKYAAARFRSRSDQMEDIVQVGTIGLIKAIDRFELSREVEFATFAMPCVVGEIKRFFRDTSWSVHVPRRLQELRIDIARATDELFQRLDRSPTAAELADHLGLTEDEVIEGLVAANGYTAASLDMPLDESGEPASATLADMIGEEDRDMRLTEDVQALKPLLAQLDERDRAILRMRFGEELTQAEIGERLGVSQMHVSRLLARMTKRMREGMLRED
>NZ_CP023696.1|WP_031134145.1|878228_878606_+|ATP-binding-protein
MLVLDSRTVDSAEVRETVSGFVAERCPWADLNAVRLVVTELLANALHHTEGGWRLRLHARDHRLTLELDDASTEPPSARQPDFAGGGGFGWRLVEQLADRVDVRPRPAGKTVRAEWWVPTERQAA
>NZ_CP023696.1|WP_037938615.1|876842_878186_+|serine/threonine-protein-phosphatase
MRAQSTTHHCLDELRTALRRAAYGAGLDPELRSRLVLSVTRLAAPDLAAGRPVSLEFLPSRTAASRDPAAPPAAAEPGAAEPAVVPPQRGDTAPGDASLTVRLSLTGGGTPAGLDQLPLPARPAPPSGAVWSLPRPDPAPRAPGGGEQGGKGGAPDPVALAEEEAAALADRLDRLSREHRRLKDELAETNSGVLALYVQLEERDEQLRQAHGRMLRQLEDALRPPPVRVPGLEMAVRYEPAESHAPTGGDLYDWFALPDGTVHITIVDALGHGLTSTRGALSVTHAVRTLALEGHELRTLVARAARALAGLDEELMASVQVVRIDPRTGRLSLANGSHPPALLVRRDGATRFLEAPGRGVGFPLPGSEAVLRDRLDPGDLLVLYTDGLTESRRDPREGELRLARAARRHRGLPMDRVPGAIAEEMHTVILHPDDTVALAVRRTGELS
>NZ_CP023696.1|WP_140160876.1|875610_876846_+|hypothetical-protein
MERPLTAVTVLVPAHDRDAAGTAARAARRAASELGLAGPRAERTAECAGELARALAARAERGAVYVQPSPLGRGLDVAAIGSALPEDGGAGAERWPDGARAGGPGGTLLEALRELADDLVVRGTPGRGTAVCARWRASGVPGRPPGPGAREAVAGPDVGALRLPVDGESSCGDAWAVAAVPAAGPADDGIAGPPGAGAGPSLAAPPGAGAGPACGDGRAAGGGPAAGNAPAGRSGARPDAATAAVTAMVVDGLGHGPAAAHAADLAVRAFHDSPALPLPRLMTAVHQALRGTRGAAVGLLRRSADGSVEHCSVGNVRAYVLGRDGVRHRFGAQPGVVGWNMPPPAAQRLPDALDGTLLLHSDGVDGRWAHSPGPGLTGLPAPLLPVVLAHAHRAARDDVTALAVAPARRTP
>NZ_CP023696.1|WP_031130469.1|888118_890263_-|primosomal-protein-N'
MTSESEKPGGRPDEAPEQLALIRETVRRAKAPRARPRTWRGAALAKELPVARVVVDKGVLHLDQFFDYAVPEELDAAARPGVRVRVRFGAGAHQVRGGRREGGRLIDGFLVERRADTDYTGPLAALADVVSPEPVLGPELLGLARAVADRYAGSLADVLQLAVPPRSARAESRPSPEPLPPPPAPEAGPWARYAHGEAFLAALAQGGAPRAVWNALPGPHWADELARAVAATLASGRGALVVVPDGRAAARVDAALTALLGDGRHALLTAEAGPEKRYRQWLAVRRGSVRAVVGTRAAMFAPVRDPGLVAIWDDGDASHSEPHAPQPHARDVLLLRAAHDRCGFLLGSTSCTVEAAQLVESGWARPLVAPRERVRAAAPLVRTVGDGELARDEAARAARLPSLAWQVVRDGLRSGPVLVQVPRRGYVPRLACERCRTPARCRHCAGPLEAPGQRDLRCGWCGRDEPHWRCAECGSTRLRAQVVGARRTAEELGRVFPAVPVRTSGRDHVLDAVPGRPALVVSTPGAEPVAEGGYAAALLLDGWALLARPDLRAGEEALRRWIDAASLVRGQDEGGTVVVVAEPTLRPVQALVRWDPVGHAQRELAERAELGFPPVSRMGAVAGRPEAVAEFLAAAELPPEAEVLGPVPLRPAAPGGPRRPGDPPAGEAWDRALVRVPPGTGAALAAALKKAQAARLARGGTLPVRVRMDPPDIG
>NZ_CP023696.1|WP_031130472.1|890705_891929_-|methionine-adenosyltransferase
MSRRLFTSESVTEGHPDKIADQISDTILDALLRKDPSSRVAVETLITTGLVHVAGEVTTKAYADIPTLVREKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDAAYEQRVEGASRKGEGDELDQQGAGDQGLMFGYASDETPELMPLPIHLAHRLSRRLTEVRKNGTIPYLRPDGKTQVTIEYDGDKAVRLDTVVVSSQHASDIDLDSLLAPDIREFVVEHVLKELLDDGIKLETEGYRLLVNPTGRFEIGGPMGDAGLTGRKIIIDTYGGMARHGGGAFSGKDPSKVDRSAAYAMRWVAKNVVAAGLASRCEVQVAYAIGKAEPVGLFVETFGTAKVEVERIENAIAAVFDLRPAAIIRDLDLLRPIYSQTAAYGHFGRELPDFTWERTDRVDALREAAGL
>NZ_CP023696.1|WP_031130474.1|892174_893383_-|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MPEPKPQVVLGVSGGIAAYKACELLRRLTESGHDVRVVPTASALHFVGAATWSALSGNPVSDQVWEDVHEVPHVRIGQRADLVVVAPCTADMLAKAAHGLADDLLTNTLLTARCPVVFAPAMHTEMWEHPATRENVATLRRRGAVVIEPAVGRLTGADTGKGRLPDPAEIFEVCRRVLARGAAAPDLTGRHVVVSAGGTREPLDPVRYLGNRSSGKQGYALARTAAARGARVTLVAANTALPDPAGVDVVPVGTALQLREAVLKAAADADAVVMAAAVADFRPAAYAEGKIKKREGEEPAPVALVRNPDVLAELSAARARPGQVVVGFAAETDDVLANGRDKLRRKGCDLLVVNEVGERKTFGAEESEAVVLAADGSETPVPYGPKEILADTVWDLVVPRLP
>NZ_CP023696.1|WP_003982715.1|893516_893789_-|DNA-directed-RNA-polymerase-subunit-omega
MSSSITAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVDTHVHEKPLSIALREINAGLLTSEAVEGPAQ
>NZ_CP023696.1|WP_051839284.1|893822_894416_-|guanylate-kinase
MAATSRGTTPEPPDVRPRLTVLSGPSGVGKSTVVAHMRKVHPEVWLSVSATTREPRPGERDGVQYFFVSDDEFDKLVANGELLEWAEFAGNRYGTPRRAVQDRLDAGEPVLLEIDLQGARLVRASMPDAQLVFLAPPSWDELVRRLTGRGTESAEVIERRLAAAKVELAAESEFDVTLVNTSVEDVARELLALMDVV
>NZ_CP023696.1|WP_010470436.1|894467_894791_-|integration-host-factor
MALPPLTPEQRAAALEKAAAARRERAEVKNRLKHSGASLHEVIKQGQENDVIGKMKVSALLESLPGVGKVRAKQIMERLGISESRRVRGLGSNQIASLEREFGGSKA
>NZ_CP023696.1|WP_031130477.1|895135_895969_-|orotidine-5'-phosphate-decarboxylase
MTAFGARLRAAMDERGPLCVGIDPHASLLAAWGLEDDVDGLETFTRTVVEALAGTVAVFKPQSAFFERFGSRGVAVLERAVADLRAAGGLVVMDAKRGDIGSTMAAYAQTYLCPDSPLFSDALTVSPYLGYGSLKPAVDLARESGAGLFVLALTSNPEGAEVQRAVREDGRTVAATMLAHLAAENAGETPMGSFGAVVGATLGDLSSFDLDIDGPLLAPGIGAQGATPADLPAVFGAAVRNVVPNVSRAVLRHGPDAAALRGAAERYADEVRAAVAG
>NZ_CP023696.1|WP_031130479.1|895965_897087_-|quinone-dependent-dihydroorotate-dehydrogenase
MYKFFFDLVFTRMDPEKAHHLAFRWIRLAARVPVLRTLAAAVLAPRYKELRTEALGLRMHGPFGLAAGFDKNAAGIDGMAMLGFDHVEIGTVTGEPQPGNPRKRLFRLVPDRALINRMGFNNEGSAAVAERLRTRVPVFRTVVGVNIGKTKAVPEAEAVADYVKSTERLAAHADYLVVNVSSPNTPGLRDLQATESLRPLLTAVREAADRAVTDRRVPLLVKIAPDLADEDVDAVADLALELGLDGIIATNTTIAREGLGLKSDPALAAETGGLSGAPVKARSLEVLRRLYARVGDRLVLVGVGGVESAEDAWQRILAGATLVQGYSALVYEGPFYARAVHKGLAARLAASPYATLAEAVGAATRDHSGKATA
>NZ_CP023696.1|WP_031130481.1|897187_900496_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKSEGLRVILVNSNPATIMTDPEIADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISMHEQGVLEKYGVELIGANVEAIHKGEDRDLFKGVVEAVNAKIGHGESARSVICHSMDDVLRGVETLGGYPVVVRPSFTMGGAGSGFAHDEDELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKNDNVVVVCSIENFDPMGVHTGDSITVAPAMTLTDREYQTLRDIGIAIIREVGVDTGGCNIQFAVNPDDGRVIVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETPASFEPTLDYVVVKAPRFAFEKFPSADSTLTTTMKSVGEAMAIGRNFTEALQKALRSLEKKGSQFAFTGDPGDKAELLREAVRPTDGRINTVMQAIRAGATREEVFEATKIDPWFVDQMFLIKEIADELAAVEKLDPELLAEAKRHGFSDLQIAEIRGLREDVVREVRHALGVRPVYKTVDTCAAEFAAKTPYFYSSYDEETEVAPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSDAGYETVMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVHAEQQAGPVAGVVVQLGGQTPLGLSQALKDNGVPVVGTPPEAIHAAEDRGAFGRVLAEAGLPAPKHGTATTFAEAKAIADEIGYPVLVRPSYVLGGRGMEIVYEEARLEAYIAESTEISPSRPVLVDRFLDDAIEIDVDALYDGRELYLGGVMEHIEEAGIHSGDSACALPPITLGGFDIKRLRTSTEAIAKGVGVRGLINIQFAMAGDILYVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAELRAEGLLPATGDGGELPLDAPISVKEAVMPWSRFRDIHGRGVDTVLGPEMRSTGEVMGIDSVFGTAYAKSQAGAYGPLPTKGRAFISVANRDKRSMIFPARELVAHGFELLATSGTAEVLKRNGINATVVRKQSEGEGPNGEKTIVQLIHAGDVDLIVNTPYGTGGRLDGYDIRTAAVARGVPCLTTVQALAAAVQGIDALNHGGVGVRSLQEHAEHLTAARD
>NZ_CP023696.1|WP_031130483.1|900488_901628_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTTSTRGTRVPAVLVLEDGRSFRGRAYGAVGETFGEAVFSTGMTGYQETLTDPSYHRQVVVMTAPHVGNTGVNDEDPESARIWVSGYVVRDPARTPSNWRATRTLDEELERQGVVGISGVDTRALTRHLRERGAMRVGIFSGDAVAAEADLLAKVRAQPEMKGADLSAEVATKEPYVVPAIGEKKFTVAAVDLGIKGMTPQRMAERGIEVHVLPATATVDDVYAVEPDGVFFSNGPGDPATADHPVSVMRAVLERRTPLFGICFGNQILGRALGFGTYKLKYGHRGINQPVQDRTTGKVEVTAHNHGFAVDAPLDKVSDTPFGRAEVSHVCLNDNVVEGLQLLDQPAFSVQYHPEAAAGPHDAAYLFDRFVALMEAERA

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Crispr_ID: NZ_CP023696_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_3

959944-960026

Orphan

Consensus_repeat	Method
CAGCGCCCCGGAGGCGCAACGCGCCGA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP023696_3

>merge|NZ_CP023696|3|959944-960026|CRISPRCasFinder
CAGCGCCCCGGAGGCGCAACGCGCCGAACGAGGGGGGTCGGCTCGGCACCCGCCCACCAGCCCCCGGAGGCGCAACGCGCCGA

>NZ_CP023696|3|3|959944-960026|CRISPRCasFinder
CAGCGCCCCGGAGGCGCAACGCGCCGA	ACGAGGGGGGTCGGCTCGGCACCCGCCCA
CCAGCCCCCGGAGGCGCAACGCGCCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031131304.1\|949335_950958_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031131287.1\|957453_957921_-\|TIGR02611-family-protein	unknown	unknown	gnl\|CDD\|131660
NZ_CP023696.1\|WP_031134149.1\|960777_961299_+\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|372611
NZ_CP023696.1\|WP_031136662.1\|965904_967164_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP023696.1\|WP_031134153.1\|962201_963014_-\|aminodeoxychorismate-lyase	unknown	unknown	gnl\|CDD\|238800
NZ_CP023696.1\|WP_031134147.1\|960043_960487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031131299.1\|951604_953584_-\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NZ_CP023696.1\|WP_031131291.1\|955694_956423_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|181176
NZ_CP023696.1\|WP_031137279.1\|968066_969299_-\|uroporphyrinogen-III-C-methyltransferase	unknown	unknown	gnl\|CDD\|381169
NZ_CP023696.1\|WP_031131285.1\|958911_959472_+\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP023696.1\|WP_031134151.1\|961354_962158_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023696.1\|WP_031134155.1\|963016_964072_-\|chloride-transporter	unknown	unknown	gnl\|CDD\|130883
NZ_CP023696.1\|WP_031131296.1\|953730_954984_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_CP023696.1\|WP_078915577.1\|956645_957239_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176866
NZ_CP023696.1\|WP_031136664.1\|965068_965275_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031136660.1\|967154_967973_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_CP023696.1\|WP_031131294.1\|954983_955544_-\|DUF4365-domain-containing-protein	unknown	unknown	gnl\|CDD\|379535
NZ_CP023696.1\|WP_150485767.1\|969854_973832_-\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|376752
NZ_CP023696.1\|WP_031131301.1\|950958_951519_-\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|238606
NZ_CP023696.1\|WP_003959770.1\|958119_958533_+\|SsgA-family-sporulation/cell-division-regulator	unknown	unknown	gnl\|CDD\|377399

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031134155.1\|963016_964072_-\|chloride-transporter	gnl\|CDD\|130883	TIGR01824, Anthranilate_synthase_component_I-like_protein, aminodeoxychorismate synthase, component I, clade 2. This clade of sequences is more closely related to TrpE (anthranilate synthase, TIGR00564/TIGR01820/TIGR00565) than to the better characterized group of PabB enzymes (TIGR00553/TIGR01823). This clade includes one characterized enzyme from Lactococcus and the conserved function across the clade is supported by these pieces of evidence: 1) all genomes with a member in this clade also have a separate TrpE gene, 2) none of these genomes contain an aparrent PabB from any of the other PabB clades, 3) none of these sequences are found in a region of the genome in association with other Trp biosynthesis genes, 4) all of these genomes aparrently contain most if not all of the steps of the folate biosynthetic pathway (for which PABA is a precursor). Many of the sequences hit by this model are annotated as TrpE enzymes, however, we believe that all members of this clade are, in fact, PabB. The sequences from Bacillus halodurans and subtilus which score below the trusted cutoff for this model are also likely to be PabB enzymes, but are too closely related to TrpE to be separated at this time.	3.39796e-113
NZ_CP023696.1\|WP_031131287.1\|957453_957921_-\|TIGR02611-family-protein	gnl\|CDD\|131660	TIGR02611, Putative_membrane_protein, TIGR02611 family protein. Members of this family are Actinobacterial putative proteins of about 150 amino acids in length with three apparent transmembrane helix and an unusual motif with consensus sequence PGPGW. [Hypothetical proteins, Conserved].	3.80003e-33
NZ_CP023696.1\|WP_031134149.1\|960777_961299_+\|thioredoxin-domain-containing-protein	gnl\|CDD\|372611	pfam13462, Thioredoxin_4, Thioredoxin.	2.30058e-24
NZ_CP023696.1\|WP_031136662.1\|965904_967164_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.74955e-88
NZ_CP023696.1\|WP_031134153.1\|962201_963014_-\|aminodeoxychorismate-lyase	gnl\|CDD\|238800	cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.	1.13939e-76
NZ_CP023696.1\|WP_031131299.1\|951604_953584_-\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP023696.1\|WP_031131291.1\|955694_956423_+\|3'-5'-exonuclease	gnl\|CDD\|181176	PRK07942, PRK07942, DNA polymerase III subunit epsilon; Provisional.	4.74554e-108
NZ_CP023696.1\|WP_031137279.1\|968066_969299_-\|uroporphyrinogen-III-C-methyltransferase	gnl\|CDD\|381169	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT). SUMT is an enzyme of the cobalamin and siroheme biosynthetic pathway. It catalyzes the first of three steps leading to the formation of siroheme from uroporphyrinogen III; it transfers two methyl groups from S-adenosyl-L-methionine to the C-2 and C-7 atoms of uroporphyrinogen III to yield precorrin-2 via the intermediate formation of precorrin-1. Precorrin-2 is also a precursor for the biosynthesis of vitamin B12, coenzyme F430, siroheme and heme d1. This family includes proteins in which the SUMT domain is fused to other functional domains, such as to a uroporphyrinogen-III synthase domain to form bifunctional uroporphyrinogen-III methylase/uroporphyrinogen-III synthase, or to a dual function dehydrogenase-chelatase domain, as in the case of the multifunctional S-adenosyl-L-methionine (SAM)-dependent bismethyltransferase/dehydrogenase/ferrochelatase CysG, which catalyzes all three steps that transform uroporphyrinogen III into siroheme.	2.05138e-105
NZ_CP023696.1\|WP_031131285.1\|958911_959472_+\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	4.15415e-20
NZ_CP023696.1\|WP_031134151.1\|961354_962158_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.24222e-14
NZ_CP023696.1\|WP_031131296.1\|953730_954984_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00745125
NZ_CP023696.1\|WP_078915577.1\|956645_957239_-\|hypothetical-protein	gnl\|CDD\|176866	cd07824, SRPBCC_6, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	1.56867e-41
NZ_CP023696.1\|WP_031136660.1\|967154_967973_-\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	2.86676e-62
NZ_CP023696.1\|WP_031131294.1\|954983_955544_-\|DUF4365-domain-containing-protein	gnl\|CDD\|379535	pfam14280, DUF4365, Domain of unknown function (DUF4365). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 182 and 530 amino acids in length. There is a single completely conserved residue D that may be functionally important.	2.83002e-22
NZ_CP023696.1\|WP_150485767.1\|969854_973832_-\|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase	gnl\|CDD\|376752	pfam02277, DBI_PRT, Phosphoribosyltransferase. This family of proteins represent the nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) enzymes involved in dimethylbenzimidazole synthesis. This function is essential to de novo cobalamin (vitamin B12) production in bacteria. Nicotinate mononucleotide (NaMN):5,6-dimethylbenzimidazole (DMB) phosphoribosyltransferase (CobT) from Salmonella enterica plays a central role in the synthesis of alpha-ribazole-5'-phosphate, an intermediate for the lower ligand of cobalamin.	6.20428e-146
NZ_CP023696.1\|WP_031131301.1\|950958_951519_-\|HIT-domain-containing-protein	gnl\|CDD\|238606	cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.	2.00613e-65
NZ_CP023696.1\|WP_003959770.1\|958119_958533_+\|SsgA-family-sporulation/cell-division-regulator	gnl\|CDD\|377399	pfam04686, SsgA, Streptomyces sporulation and cell division protein, SsgA. The precise function of SsgA is unknown. It has been found to be essential for spore formation, and to stimulate cell division.	2.09293e-46

>NZ_CP023696.1|WP_031131285.1|958911_959472_+|CGNR-zinc-finger-domain-containing-protein
MLIPHDTRIALDTVVDLMNTAPEGGRGETLGDVPSLYAFVEGHQVSGVGELGPRDLRAVQEVRDRFAEVFAAPDARTAAGLINQLVAAAGTTPQLTDHDGYDWHVHYFAPGASVADHLAADCGMALAFILVAGERERLRRCEAPDCRRAFVDLSRNRSRRYCDSRTCGNRLHVAAYRARRKDAAAG
>NZ_CP023696.1|WP_003959770.1|958119_958533_+|SsgA-family-sporulation/cell-division-regulator
MNTTVSCELHLRLVVSSESSLPVPAGLRYDTADPYAVHATFHTGAEETVEWVFARDLLAEGLHRPTGTGDVRVWPSRSHGQGVVCIALSSPEGEALLEAPARALESFLKRTDAAVPPGTEHRHFDLDTELSHILAES
>NZ_CP023696.1|WP_031131287.1|957453_957921_-|TIGR02611-family-protein
MSAESDERGKVAQVATGAPAAGDVEHYPNGEERPLGSRAPAFVKARRTLHMGWQAGVFLIGLAVVVVGVLMLVLPGPGWLVIFAGMAIWATEFVWAQLVLRWTKRKVTEAAQRALDPRVRRRNMILTAVGLVIAGALIAVYVWKFGLAMPWRVAV
>NZ_CP023696.1|WP_078915577.1|956645_957239_-|hypothetical-protein
MDGQDREHGEGRESRGAPAGRPRRPARAFRAAGTRTGTRAESPRRTAGAERHHYRFRSRWPLPAPPAAVYAVLEHPEHYPRWWPQVRAARRAGDGTVTTRVRSAVPYTLTVTLAARRRDPAARVLEAALTGDVEGWARWTLTPDGPRRTLAVYEQDVHARAPLLRRLALPARPLLRANHALMMRAGRRALAEHLRAV
>NZ_CP023696.1|WP_031131291.1|955694_956423_+|3'-5'-exonuclease
MARWFEGPLAAFDTETTGIDVERDRIVSAALVVQDTEGGRPRTTRWLVNPGVPVPPGATEVHGLTDEHLRHNGRWPAPVVDEIARLLAEQCAVGRPLVVMNAPFDLTLLDRELRRHRASTLARYLQNVPLCVLDPRVLDRHLDRYRKGRRTLTDLCAQYGVALEGAHDAAADATAALEVVRAVGRRFAARLEELSAAELHARQAVWHAAQARGLQEWFARNGSDEAVDPAWPLRPEQSAAAA
>NZ_CP023696.1|WP_031131294.1|954983_955544_-|DUF4365-domain-containing-protein
MALAAQPDPGTHPAPSPRGALATTACMETLQVGYLHAVAAAAGCTLSQPFPDNGIDWHVSHSAPGHTVDDEVTIKVQLKATYQIPPRPPGPAFPFTLDNAHLVKLARTPVAVHRILVVMLVPRARDDWLRARHDGLDLRHCCYWTNLAGHPVTGRRRTTVRIPTTRVFDDRALCAIMGRVGAGGTP
>NZ_CP023696.1|WP_031131296.1|953730_954984_-|hypothetical-protein
MRRPTGEHAPTDPPGAPRVDPRVLTALLGRHGWHRTGGGSGPYTRWTPPGPAAAPSLLVPTGLDLADSHDLLAEALTALARTTAPSARAVLTALATPSDEIHWHRAAPATAGPAPWAAQDRLRTAARRTLLAAARAAHGRTGPRRPAALSDRDLPDPDLPDRDRAETPGAPPGRNLAETLPGQALPGPSLLDHVLLTTPPGDAPALTAYLPVDPGRPVTERLHHALHATREAVDYQRATGRPDAFDTAVAAGVGRELTEALVALVHGTEGAAVTLAWAPATGAPAGCAARPEPVEFTPGDLPALREAGARYRRARSSAPARVTGTVVRLCRTGSRGPGTVRLRVLAGAGTTHLRATLDEDGYRTAVHAHLAGVPLRVHGRLEVRGGRHHLTGTHDVAAVHVDDAERDRLTKTLDEDG
>NZ_CP023696.1|WP_031131299.1|951604_953584_-|threonine--tRNA-ligase
MSDVRVIIQRDSEREERVVTTGTTAADLFAGERAIVAARVDGELRDLAYELRDGEAVEGVEISSEDGLAILRHSTAHVMAQAVQELFPEAKLGIGPPIKDGFYYDFDVEKPFTPEDLKAVEKKMQEIQKRGQRFARRVTTDEAAREELAGEPYKLELIGLKGNAAQAAEGADAEVGGGELTIYDNLDAKTGELCWKDLCRGPHLPTTRAIPAFKLMRSAAAYWRGSEKNPQLQRIYGTAWPSKDELKAHLDFLAEAEKRDHRKLGAELDLFSFPDELGPGLAVFHPRGGVIRKVMEDYSRRRHEASGYEFVNTPHISKERLFEISGHLPHYAEGMFPAIEFDEQNYRLKAMNCPMHNLVFKARGRSYRELPLRLFEFGTVYRYEKSGVVHGLTRSRGFTQDDSHIYCTREQMPQELDALLTFVLDLLRDYGLTEFELELSTRDDSDKFIGSDEDWEEATEALRQAAEKQGLPLVPDPGGAAYYGPKISVQAKDAIGRSWQMSTIQVDFNQPKRFNLEYTAADGSRRQPVMIHRALFGSIERFFGVLLEHYAGAFPAWLAPLQAVGIPVGDAHVEYLHEFAAEAKRKGLRVEVDASSDRMQKKIRNHQKLKVPFMIIVGDDDMSAGTVSFRYRDGSQKNGIPRDLALAELVDVVERRVQV
>NZ_CP023696.1|WP_031131301.1|950958_951519_-|HIT-domain-containing-protein
MLNRMTNEPEQQIGVGTPDAFQRLWTPHRMAYIQGENKPTDSGAGDGCPFCSIPAKSDEDGLVVARGESVYAVLNLYPYNGGHLMIVPFRHVADYTELDEAETAELAAFTKRAMTALRTASGAHGFNLGMNQGAAAGAGIAAHLHQHIVPRWGGDTNFMPVTAHTKVLPQLLADTRRMLADAWPAA
>NZ_CP023696.1|WP_031131304.1|949335_950958_+|hypothetical-protein
MDSFGPGAQVPLQGSSGQSVATNALASAAYRDSPLEDILKANNDWYQSTVKKGKFSLFEPNLGEAFSRAVVVRMLGGGRSAVIQSFGTDPQPVVEHCLSANRIRKQRDLRLTLITLLCGVVFLPGLLLWLVLFQIRRTLAGAANKRAGAAGTALLAGFAILAVLVMVKLPFDGFLSLYLRAMIIAPVVGWFLAKHVCETTARDLRARWEALLSGGGVAAKIPEAVPQSPGETAAEELRQSLEKLTAEQRSNVVFYAGPRGILGMGTRWGGWHLAEELKPRDGKEIHAFRTWDVVRPIHDQLKLLERGSLKSGFPTPSVNHWIVVPVGDGAKEVSRPDGEDVVHFQVKPHEIQRVCNENQFGKGNRHYLGVQFVLWDGQLVLTMLVTVTALLHTLRIEVSGHALGPVHSLFTSKPAAKTKTVSKTIRFWETRDIKLPLVETNEVVRLAVRAPLTWFPPVLDFLGGKLVLPEPFGLRHAWAEAPWKHRFMADDVIRASTPVMRAVHAATVKMLDEHGVDTTSLAGSNFTADPAPKKADVYDA
>NZ_CP023696.1|WP_031134147.1|960043_960487_-|hypothetical-protein
MLAETICSAVAAAGLGIAAITAYRRRFLAAVRVAAYALVPLGLVLTGAVEWLARTAFSPVAWAGFGLLGASWLMFAGTRAVERRRGGAGGRERRAAAAGSGGPAAAAPGAARPPLDPGKRRKAADTGPGAPADDFSEIEAILKKHGI
>NZ_CP023696.1|WP_031134149.1|960777_961299_+|thioredoxin-domain-containing-protein
MNDSTTDPTARPVVLDVWCELQCPDCRTALEDLRALRDRYGDRLEVRLRHFPLEKHKHAYAAAQAAEEALAQGAGWPYVERVLGGVAELDARGEAYLLQVARELGLDDEEFDTALIDGRHLLAVDADQAEGKAIGVTGTPTYVIGGERLDGGKSQEGLRARVEEIADRLLAGG
>NZ_CP023696.1|WP_031134151.1|961354_962158_-|GNAT-family-N-acetyltransferase
MTTTLRPSGPLQQADDGTLARSYEVCVNSRPVGAVRVATLPAPGRPLGTISDLRVDEADRGRGRGTVAALAAEEVLRGWRCERIRVSVPAGAHAARRLAGALGYVETGHVLAKDLGPVDGADPADPADPEGPVPGGVGIRAMTDAEAAAWIAAEPGRAALLPDGPATDGTRLHVAVRDGTRIGHLWTGWRDLPTGERVPYVWEVAVAASERGRGHGRRLMRFAERVVRDAGGGRLVLRVDPGNAPARALYASLGYRPLLTDLEKTLY
>NZ_CP023696.1|WP_031134153.1|962201_963014_-|aminodeoxychorismate-lyase
MKLWVNGELRDADAATISVLDHGLTVGDGVFETLKTVDGRPFALDLHLDRLVRSARGLGLPDPDLDEVRRACAAVVEANPVRLGRLRVTYTGGLSPLGSDRGDAGPSLFVALGETAPRPDTTAVVTVPWTRNERGALTGLKTTSYAENVVALAHAHRQGASEALFANTVGRLCEGTGSNVFVVVDGRIHTPPLSSGCLAGITRHLAVEWTGAQETDLPMDVLRTADEVFLTSTLRDVQAVHRVDGRELGTAPGPVTTKAMRLFAERAAAM
>NZ_CP023696.1|WP_031134155.1|963016_964072_-|chloride-transporter
MYDLAPLARFGGLLATDLRDVTSDPEALESSGFWAVAADFEGRLTCARFGDVRPDPVPAPVPGRWRGPAAGDWTSSLDREAYTAGVRRIRAYIAAGEVYQANLCRVLSAPLPAGTADVDALTALLARGNPAPYAGTIRLPAHGVEIATASPELYLRRDGATVESGPIKGTGRTPEDLLEKDHAENVMIVDLVRNDLGRVCATGSVTVPRLCAVEPHPGLVHLVSTVRGELGPGEGWPGLLAATFPPGSVTGAPKSSALRIIGELETAPRGPYCGGIGWVDADRRTGELAVGIRTFWIDRREHRGVLRFGTGAGITWGSDPEREWEETELKAARLLAVASGLYEASGSGRTI
>NZ_CP023696.1|WP_031136664.1|965068_965275_-|hypothetical-protein
MADTAARTVVRTRGRKAFIASFSGRPGRRHPLVATAMVLPLAALLVVAFGGWEAVMTQASSVGVMLGR
>NZ_CP023696.1|WP_031136662.1|965904_967164_+|serine/threonine-protein-kinase
MAMMRLRREDPRVVGSFRLHRRLGAGGMGVVYLGSDRRGQRVALKVIRPDLAEDQEFRSRFAREVSAARRIRGGCTARLVAADLEAERPWFATQYVPGPSLHDKIAEEGPLPAVDVAAIGAALSEGLVAVHEAGVVHRDLKPSNILLSPKGPRIIDFGIAWATGASTLTHVGTAVGSPGFLAPEQVRGAAVTPATDVFALGATLAYAAMGDSPFGQGSSEVMLYRVVHEEPQLHGVPDALAPLVRACLAKEPEERPSTLQLSLRLKEIAAREAQGLGMTAPPAEARPVAPRSGRAERPERADRATGGRRAGRPAPRPTERYTERTAQGRAQRTPAPRGRGPQSLPSSRTGGGRAQGHPSQAGARTGPRTGPRRPGGGTGTSPGLRRPANPRLLRQRLFVFVVVTLVVLAGIAGAQALQG
>NZ_CP023696.1|WP_031136660.1|967154_967973_-|RNA-methyltransferase
MAELLTVDDPDDPRLHDYTGLTDVELRRRREPEEGLFIAEGEKVIRRALNAGYGMRSMLLSAKWVDVMRDVIDEAPAPVYVVDPALAERVTGYHVHRGALASMRREPLPAAGDLLAAARRVAVMESVNDHTNIGAIFRSAAALGMDAVLLSPDCADPLYRRSVKVSMGAVFSVPYARLGDWPRDLRTVREAGFRLLALTPGEDAVPLDEAAPHRLERVALMLGAEGEGLSARALRAADTRVRIPMAHGVDSLNVGAAAAVAFYAVTSGRPQP
>NZ_CP023696.1|WP_031137279.1|968066_969299_-|uroporphyrinogen-III-C-methyltransferase
MVENAEQPAYPVGLRLAGRRVVVIGGGQVAQRRLPALIAAGADITLVSPSATPSVEAMAEAGEIRWERRRYEEGDLADTWYALVATTDREANARASAEAERTRTWCVRADDAEAATAWTPATGRIEGVTVAVLTGTDPRRSAAVRDAIVEGLRDGTLAAPQHRARAPFVALVGGGPGDPDLITVRGRRLLAEADVVIADRLGPRDLLDELPPHVEVIDAAKIPYGRFMAQEAINNALIDHAKRGRSVVRLKGGDPFVFGRGMEEAQALAEAGIACTVVPGISSSISVPGAAGIPVTHRGVAHEFTVVSGHVAPDDPRSLVDWASLARLRGTLVILMGVDKIGKIAEALIAHGKDPATPLALVQEGTTAAQRRVDATLATVAETVRAQDVRPPAVIVIGEVVREAPDKHAG
>NZ_CP023696.1|WP_150485767.1|969854_973832_-|nicotinate-nucleotide--dimethylbenzimidazole-phosphoribosyltransferase
MTDTGQVPGEGQPEHAGTVEQPGTPAPDAYTYLDPSAPATEDDDLLLMPGAQGAWTEPQPGVAPAPPVTVPLPQAPPGEQTPYEHTPQDPTAQGPATDGHGIAHTPQQPHPAQPPQQAPRRPLHMGPPMPDTGGVVRSLADRGPAPVAPAAPAPAPAPMPAVSVPAPGPEQQTAAVPAAPEAQPWAQAPGPAETAAPDATATGPYAPAEAAAPAAQLAPPAPTVPAPRHAAPAQHPAPEAPATGVPAQHAPIPPQAAEQAPAQEPAAEAPTDTQPVEAQPVDAPPAEAAEAQPVEPSQPVEPSQPVEAATAAQPEPEAAQTAPAPAEATPEAPAQPAQPTEPAEAAPAADAPAEAPAGAPTEAPAPETVAPQPQPEPVTEARPGPAAAQTEPPAAPAPAPEDEAQAAVDPAPAEPNAPEAPEAPAADAAPADPATATAPADEAPARVEPAAEPESAEPTAVPAPAEGAPEAAQEAEAPAEAPAQEAPAAPPAPEAAPVAEPVAETAPPAETPAEPRAETVPAPVATPEEESPAPAAEVPATEVPAAEVPADAVAAPVEPAATEQAPTQLPGTEQAEPGAPAAPAGQPRQEPQPQTADAGAVPATAPESTVEPPAPAAPTETGSPETAAPATALDAQPADTAPAAAPAPEAAPEPAPETAPEAAPEADPTPAPEVPTPEANAPETTPAPETTPGPEATAPETTPAPEATAPEATAPETTPAPEATAPETTPAPDAPAPEATPVAAPAPAGPPAPGYADDEREAILRVMRERRDIRNGFRSDPIPHEVLLRVLEAAHTAPSVGHSQPWDFVVIRSAETRRAMHELAQRQREAYARSLPKGRAKQFKELKIEAILDTPVNIVVTADPTRGGRHTLGRHTQPQMAPYSSALAVENLWLAARAEGLGVGWVSFFDEREMVRALGLPEHLEVVAYLCVGYVDEFPEEPELMQAGWSRRRPLSWVVHEETYGRRALPGEEPHDLLQETVAGIRPLDAKALGEAWERQKRMTKPSGALGMLEIISAQLCGLSRTCPPPIPEPAAVAIFAGDHGVHAQGVTAWPQEVTAQMVANFLGGGAVCNAFANQVGAEVCVVDVGVAAELPATPGLLPRKVRAGTADFMTGPALTRDEVLAAIEVGVETARDLVAAGNKAILTGEMGIANTTASAALISVYTGADPAEVTGRGTGINDEMHARKVDVVRRALELHQPDPADPIGVLGAVGGLEHAAMVGFILGGASLRTPVILDGVSAGAAALVARAVAPESLAACIAGHRSAEPGHMAALNKLGLRPLVDLDLRLGEGTGALLALPLVQSAARAMHEVATFDSAGVTEK

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Crispr_ID: NZ_CP023696_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_4

1120002-1120160

Orphan

Consensus_repeat	Method
CCCGAGCCGTACGCCCGGGTGGTGCGGGGTGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023696_4

>merge|NZ_CP023696|4|1120002-1120160|CRISPRCasFinder
CCGGGGCCGTACGCCCCCGGGGTGCGCGGTCCGGAGGCCGTGCGTCCGAACGGCGCGCGGGACTCCCGAGCCGTACGCCCGGGTGGTGCGGGGTGCCCGAGCCGTACGCCCGGGTGGTGCGGGGTGCCCGAGCCGTACGCCCGGGTGGTGCCGGGTGCC

>NZ_CP023696|4|4|1120002-1120160|CRISPRCasFinder
CCGGGGCCGTACGCCCCCGGGGTGCGCGGTCCG	GAGGCCGTGCGTCCGAACGGCGCGCGGGACT
CCCGAGCCGTACGCCCGGGTGGTGCGGGGTGCC	CGAGCCGTACGCCCGGGTGGTGCGGGGTG
CCCGAGCCGTACGCCCGGGTGGTGCCGGGTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031135961.1\|1114793_1115726_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP023696.1\|WP_031133129.1\|1126096_1126384_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226748
NZ_CP023696.1\|WP_031136505.1\|1120197_1120794_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP023696.1\|WP_031133133.1\|1124866_1125328_+\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP023696.1\|WP_031135963.1\|1115809_1116106_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135965.1\|1116220_1117132_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293840
NZ_CP023696.1\|WP_031135957.1\|1113508_1113901_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_CP023696.1\|WP_051839609.1\|1128530_1130258_+\|asparagine-synthetase-B-family-protein	unknown	unknown	gnl\|CDD\|238949
NZ_CP023696.1\|WP_031133591.1\|1108645_1110049_+\|gluconate-transporter	unknown	unknown	gnl\|CDD\|308194
NZ_CP023696.1\|WP_031136509.1\|1117724_1118747_+\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270703
NZ_CP023696.1\|WP_031135959.1\|1114071_1114362_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|376882
NZ_CP023696.1\|WP_031135953.1\|1111211_1112867_-\|FAD-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|183782
NZ_CP023696.1\|WP_031133137.1\|1123398_1124025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_037938287.1\|1125344_1126001_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_CP023696.1\|WP_078915704.1\|1130328_1130961_+\|lasso-peptide-biosynthesis-B2-protein	unknown	unknown	gnl\|CDD\|379206
NZ_CP023696.1\|WP_031136507.1\|1118750_1119965_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173844
NZ_CP023696.1\|WP_150485770.1\|1121868_1123197_+\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_CP023696.1\|WP_031136503.1\|1120865_1121639_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP023696.1\|WP_031135955.1\|1112976_1113516_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240053
NZ_CP023696.1\|WP_140160781.1\|1126606_1128010_-\|transcriptional-regulator	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031135961.1\|1114793_1115726_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	9.48914e-113
NZ_CP023696.1\|WP_031133129.1\|1126096_1126384_-\|hypothetical-protein	gnl\|CDD\|226748	COG4298, COG4298, Uncharacterized protein conserved in bacteria [Function unknown].	5.83733e-21
NZ_CP023696.1\|WP_031136505.1\|1120197_1120794_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	2.08824e-29
NZ_CP023696.1\|WP_031133133.1\|1124866_1125328_+\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	1.11235e-93
NZ_CP023696.1\|WP_031135965.1\|1116220_1117132_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293840	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily.Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	1.22406e-74
NZ_CP023696.1\|WP_031135957.1\|1113508_1113901_+\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	6.73205e-25
NZ_CP023696.1\|WP_051839609.1\|1128530_1130258_+\|asparagine-synthetase-B-family-protein	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	2.2537e-17
NZ_CP023696.1\|WP_031136503.1\|1120865_1121639_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	6.43469e-37
NZ_CP023696.1\|WP_031136509.1\|1117724_1118747_+\|phosphotransferase-family-protein	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	9.1045e-96
NZ_CP023696.1\|WP_031135959.1\|1114071_1114362_+\|DUF202-domain-containing-protein	gnl\|CDD\|376882	pfam02656, DUF202, Domain of unknown function (DUF202). This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.	2.01289e-05
NZ_CP023696.1\|WP_031135953.1\|1111211_1112867_-\|FAD-binding-dehydrogenase	gnl\|CDD\|183782	PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed.	0
NZ_CP023696.1\|WP_037938287.1\|1125344_1126001_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	8.24429e-36
NZ_CP023696.1\|WP_078915704.1\|1130328_1130961_+\|lasso-peptide-biosynthesis-B2-protein	gnl\|CDD\|379206	pfam13471, Transglut_core3, Transglutaminase-like superfamily. This family includes uncharacterized proteins that are related to the transglutaminase like domain pfam01841.	5.62317e-05
NZ_CP023696.1\|WP_031136507.1\|1118750_1119965_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	0
NZ_CP023696.1\|WP_150485770.1\|1121868_1123197_+\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
NZ_CP023696.1\|WP_031133591.1\|1108645_1110049_+\|gluconate-transporter	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	3.55747e-130
NZ_CP023696.1\|WP_031135955.1\|1112976_1113516_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240053	cd04697, Nudix_Hydrolase_38, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.58007e-26

>NZ_CP023696.1|WP_031136507.1|1118750_1119965_+|acyl-CoA-dehydrogenase
MDFAMDARTEELRKRLLDFMDAHVYPAEAVAEEQRAELASPWDTPPVVEELKAEARRRGLWNLFLPDGEYGAGLTNLQYAPLAEITGRSPHLAPTALNCAAPDTGNMEVLAQFGTPEQRERWLEPLLAGEIRSAFAMTEPDVASSDATNIETRIERDGGEYVVTGRKWYISGAMNPDCRVFIVMGKTDPDGPDVRRQQSMLLVPRDTPGVEVRRAMRVYGYEDHSHGGHAEVVFDRARVPVANLVGEEGGGFAIAQARLGPGRIHHCMRLIGMAERAIELMCRRAVSRTAFGKPLAAQGQVHAWIADARVAVEQLRLLVLKTAWLMDTVGNRGAHTEIQAIKIATPRTVVDVIDRAVQLHGAGGVSQDFPLAELWAAARTLRLADGPDEVHQRSLARRELRRYA
>NZ_CP023696.1|WP_031136509.1|1117724_1118747_+|phosphotransferase-family-protein
MSSAPPPGLDPERLRALLDRELPAGVAGPLDARLIEGGRSNLTYAVTDGVHRWVVRRPPLGHVLATAHDMRREHRVLSALHPTAVPVPRPVLLCEDESVLGAPFYVMDFVPGTPYRSAAQLAPLGAERTRAAVLGLVDTLVELHAVDPESVGLGDFGRPDGFLERQLRRWGKQLAASRGRELAGIDELHAALGRELPVSPAPAVVHGDYRLDNVLIGDGDRITAVLDWEMSTLGDPLTDLGLLVMYSTPLDVPGSVVATTATAEGHPPAAELVERYAARSGRDVERLPWYTAFAWFKLAVILEGIHHRYTLGQTVGAGFDRIGELVPLFIEHGLTTLREG
>NZ_CP023696.1|WP_031135965.1|1116220_1117132_+|MBL-fold-metallo-hydrolase
MPAHDPYTVQLAPDVHAYVQPDGGWCLNNAGWVGGADGSVLIDTTATERRAVALRDALLAHGAAPPSLVVNTHHHGDHTYGNHVFLPEATVVGHEACRSEVLAAGRQLHLIWPQTDFGDVRVTPPSVTYSDRMTLYAGGTEVRLIHPGVAHTTGDTIVHLPERGVVFTGDLVFHGGTPFLATGSLRGSLRALDLLRSLDAETVVPGHGPLADPSAYDATEAYLRFVAELAEDGHARGLTPLEVARGADLGVFGELREPERLVANVHRAYAELEGRPEGAPLDVAAVFGDMAAMNGGRAVACHA
>NZ_CP023696.1|WP_031135963.1|1115809_1116106_+|hypothetical-protein
MTAPHQEHPAHQHTHGPACGHRSVVHGDHVDYVHDGHLHREHSGHWDECEPGEHIAHSGHAHEHGEGCGHPAVAHGDHVDYVHEGHRHAAHDGHWDDH
>NZ_CP023696.1|WP_031135961.1|1114793_1115726_-|NADP-dependent-oxidoreductase
MKAISYRRYGGPEVLEYGDRPDPKVGPDKVLVKVRAAAVNPVDWKCQAGYLDTILDAFFPVVPGWDVSGVVVQPGVSVPEYAVGDEVMGYVREDALCHGTFAEYVAAPVRTLARKPRTMDFAEAAALPLAGLTAYQALHRALRVRKGETVLVHAAAGAVGSLAVQLARHMGARVLGGVRESGAERVRELGGEPVAYGAGFARRVRELAPDGVDAVLDTVGGEPLRSSPQVLTPEGRLASIADGEVVNLGGLYFWVRPDADDLTALADLAEGGVLKVRVARTFPLERAADAQRAAMAGGLGGKVVVTLDED
>NZ_CP023696.1|WP_031135959.1|1114071_1114362_+|DUF202-domain-containing-protein
MQPERTRLAWRRTTLSCTVAAVLAARQAVHGGDAETAGVLGAGLSLLVWVAFLVVAQRRIAALGRRARPDPLAARAALAAALCTVALAGFGVAVVW
>NZ_CP023696.1|WP_031135957.1|1113508_1113901_+|DUF202-domain-containing-protein
MADLGRSLRLWFSPQRVREEGETPDYRFSLANERTFLAWLRTGLALVGGGFAVDQFLPDLRWGVRVGMALVLLAAGALCALRAVNHWVRCERAMRLGEDLPVSRFPAVLGLAVGVVAAAMVLVVLFGWTG
>NZ_CP023696.1|WP_031135955.1|1112976_1113516_+|NUDIX-domain-containing-protein
MNASPADELLDVVDERDRVVGRLPRGEVYARGLRHRCVFVLVRDAGDRIFVHRRTASKAVFPSLYDMFVGGVVGAGEPYDAAALREAEEELGVTGLPRPEPVLSFLYDDGPGGRGSWWSRVYEVRCDLPVEPQAEEVAWHAFLPEAEVERRLGAWPWVPDGLAAWERLRAARGRGPGRG
>NZ_CP023696.1|WP_031135953.1|1111211_1112867_-|FAD-binding-dehydrogenase
MAYDADVIVIGAGLAGLVATAELAAAGRSVILLDQEPEQSIGGQAHWSFGGLFLVDSPEQRRMRVRDSRDLALQDWLGTAGFDRPEDHWPRRWAEAYVDFAAGEKRAWLHRLGVRFFPVVGWAERGGYGATGHGNSVPRFHITWGTGPGLVEPFERRVREGVARGLVSARFRHRVTGLGRTGGAVDTVSGEVLEPSGAPRGTASSREVTGAFEYRAQAVVVTSGGIGGNHELVRAQWPERLGTPPEHMLSGVPAHVDGLMLGIAEAAGAHHVNRDRMWHYTEGIENWDPIWARHGIRILPGPSSLWLDALGRRLPVPLFPGFDTLGTLEHIMRTGHDHTWFVLDQRIIGKEFALSGSEQNPDLTGRSVRDVIGRARTDVPAPVRAFMEKGADFVVERDLSALVRGMNALTGEPLVDEAALRREIVARDREIANPFTKDLQVTAIRGARRYLGDRLIRTAAPHRLLDPKAGPLIAVRLRVLTRKSLGGLATDLSSRVLTAEGEPLPGLYAAGEAAGFGGGGVHGYRALEGTFLGGCLFSGRAAGRAAARAVA
>NZ_CP023696.1|WP_031133591.1|1108645_1110049_+|gluconate-transporter
MTRLSVETLAADAAEPITSAGDAQLGAAVLGGIALIVLLITRFKLHAFLALTIGSLALGVFAGAPLDATIASFSGGLGSTVAGVGVLVALGAILGKLLADSGGADQIVDTILARASGRAMPWAMVLIASVIGLPLFFEVGIVLLIPVVLMVAKRGGYSLMRIGIPALAGLSVMHGLIPPHPGPLVAIDALGADLGITLALGLLVAVPTVVIAGPLFSRYAARWVDVQAPDGMMPQRTSGDEGPVKRPGFGVTVATVLLPVALMMVKALVDIVVDDPENPVQRVTDTVGSPLIALLAAVLVALFTLGRAAGFTKERISTTVERSLAPIAGVLLIVGAGGGFKTTLIDIGVGRMILDLSRDWAIPALLLGWLIAVAIRLATGSATVATISAAGLVAPLAADMSASHAALLVLAIGAGSLFFSHVNDAGFWLVKEYFGMDVGQTVKTWSVMETIISVVGIVCVLLLSLVL
>NZ_CP023696.1|WP_031136505.1|1120197_1120794_-|TetR/AcrR-family-transcriptional-regulator
MARTTDGNGATPVPRRLLAAATRLFAERGYDRTSVQEIVEAAGVTKGALYHYFGSKEDLLHEVYARVLRLQQERLDAFAGADAPVERRLRDAAADVVVTTIENLDDASIFFRSMHHLSPEKNKQVRAERRRYHERFRALVEEGQRSGVFSSATPADLVVDYHFGSVHHLSTWYRPDGPLSPREVADHLADLLLRALRP
>NZ_CP023696.1|WP_031136503.1|1120865_1121639_-|SDR-family-oxidoreductase
MGSTGTFQGARVVVTGAAGGIGAALARRFAAEGARVAVNDLDPARVRAVAEDIGAVPVPGDASAVVEEARDALGGAVDVYCANAGLASPGDAAAGEEVWSAAWDVNVMAHVRAARVLLPDWLERGSGRFVSTVSAAGLLTMVGAAPYSVTKHGAYAFAEWLSLTYRHRGLKVHAICPQGVRTDMLAAAGSAGELVLAPTAVEPGDVADALFAGMAEDRFLILPHPEVAGYYRARAAEPERWLGGMNRVQRTWEATGR
>NZ_CP023696.1|WP_150485770.1|1121868_1123197_+|DUF1343-domain-containing-protein
MGVSRRGLLAVAGGALGVAGVAGAPGAASGTGANTGAGAGAGDGPAFDGTGAGAGGRAAGRRVRTGFERLAADGYAPLAGQRVGVVTNPTGVTAGVRHIVDVMHADERVRLVAVFGPEHGFRGTAQAGGSEGRYDDPATGLPVYDTYGKSGRALADVFAASGVDTVVFDIQDAGARFYTYIWTMYDCMVAAELAGKRFVVLDRPNPVGGRAALGPVLDRAYATFVGREPIAQVHGMTVAELARLFNGEFLARPVRLETVRMTGWRRRDLFDATGLPWVPPSPNMPTPDTALVYGGTCLFEGTNLSEGRGTTRPFELLGAEGVDRRWAEAANALELPGVTFREAYFAPVFSKFQGRTVGGVQLHVHDRAAFDPVRTGVGLLVTAKRTWSGFAWRADHWIDKLTGSATVRTMVDAGAGPDEVATAWQRDLEAFRAVRGEYLLYR
>NZ_CP023696.1|WP_031133137.1|1123398_1124025_+|hypothetical-protein
MAGFRSLARQVRDPGCDVALRRYSLRKCLERFAPYGHRATWDHLCRRHGFGHEDRDLDPARLVAALDEVEEARAVWLAYERRFAERRRREKRLGLRSPGPVDDWHRRTWGGNGVARCADPAVHPRLPLAEALRRLIAALEAGPGGRCPVCAGARFVWRWDGGDEARGPVCAGCGVLVPAPVLSAEALAAARPGAGRADARAGALAAVG
>NZ_CP023696.1|WP_031133133.1|1124866_1125328_+|MaoC-family-dehydratase
MAEPRIFTTVDELRAAVGEQLGHSDWLEVDQKRIDLFADATGDHQWIHVDPERAAQGPFGATIAHGYLTLSLLPVLTPQVMRVEGVRMGVNYGTNKVRFPAPVPVGSRVRATALVKAVEDVPGGVQLTAVVTVEREGGDKPVCVAESVSRFYL
>NZ_CP023696.1|WP_037938287.1|1125344_1126001_-|TetR/AcrR-family-transcriptional-regulator
MGAAEETAGGETPWGEVTPDAARRLLVAAVDAFAERGYHATTTRDIAGRAGMSPAALYIHYKTKEELLHRISRIGHDKALEILEEAANGPGTAAERLADAVRSFVRWHAERHTTARVVQYELDALGPEHRAEIVALRRRTDAAVRRIIGEGVAAGEFDVPDVPGTTLAVLSLCIDVARWFNAQGSRTPDEVGALYAGLVLRMVGARDRRPGAAAGPRP
>NZ_CP023696.1|WP_031133129.1|1126096_1126384_-|hypothetical-protein
MSDTPVKQQNTAAYYAQAVASFAIAIAAVAIGIGNLEADVWVRAFLGIAVLYLTTSAFTLAKVVRDRQEAGQIVSRVDQARLEKLLAEHDPFQKL
>NZ_CP023696.1|WP_140160781.1|1126606_1128010_-|transcriptional-regulator
MSHPAGRPNEALAHWVRLSGASYERVAKAVNEVAASHGRHDVQTDSSRVSRWINKGERPRQPVPEYLAQALTKLCGQPYELTSADLGFSSSRPRRAGEGWSARAVVAAILDTTRSDAVTDDRTPPRARLLRGAELVTAVQPWLHLPDDEPLPEPAKPGRQLGLSDVDRIHATTSAFRRLDNEHGGALSRLAVVGQLQEVTHLARTCTFTEDTGRALFAAVAELASVAGWMTHDAGVHGEAQRYLLLGLQAAKQAGRHGAGIGGHLLNCLARQANHLGHAEDALELVQAAQYGTRKLPPGRLRALLCSLEARCHAVLGDIAEMERATAAAEAALAADSGEPTPSWAAWFDAAEFHVTAGVCEFLAAEHVPARAERAITLIAQGTGHRPAERVRSRAFDHIALARAYVRAGEPEAADVATSTALALMGSVSSTRVGDRLQELDAELKAAPLGGTVVESRERIRAAVYPQ
>NZ_CP023696.1|WP_051839609.1|1128530_1130258_+|asparagine-synthetase-B-family-protein
MEQQNAAAVQELPRTRGEPTRTVFDGPCRLTVTGDCGASRDELAQALTAVASHDWMRLTNWPGSYWVSAHAPDGTRFIGGDLAGTRPVYYTRHEHGDPTWAVHLGDLVELTGAAADLELLVARLACGAQHWPHRTLYRGISLVPGGYGLVIARGEATVVDISGIRPAADLPAAAAAFGHVLTEAVQRPVRNAGVEVGADLSGGLDSATAVLLAAAVGPVRAVTYTDGHTSGEDASYAVRIAEHAGIPHEIAAGRDEHLPFRLDGVPDTDEPAADVVNWHMDRLYLAPVAGSPLHLTGHGGDVVLDASSAAWVGMIQQGEERAAKRHVASWARLRGLAPRPYWMELRQTAALGRAGVLLRAADALESAAPLTADGSSGWTWCRPGAAASWLTPYARVRAAAMLREAAGGEQPESADEAEQWAALRATGEAARTARALHAPIGVRPVYPFLDNQVVRAAFAVPASVRRGVVTYKPLLAAALPSLPDWLTSRRTKGSFASQRIAGLERHRFALAQLIEDSPLVAAGLIDPAAARRTLLEAARGQSAAPIAELHQLIAACQWLTGRARSGPAGAREAAC
>NZ_CP023696.1|WP_078915704.1|1130328_1130961_+|lasso-peptide-biosynthesis-B2-protein
MAHARRVCRHGVAGGCDDGLRRRARRPDRHPGGTRPRRRTGRRARLRGEPPGARGARGHRPPPGTAAKVVAPVTVVAPGARPTAPLHLRLVATVALALSLALCHVPLRRRIAVVRQARRLPYVSARRLDALYTATTAAVPLWWPGRVACMEISLATVIAAALTGRRARWVLGARFRPDAAHAWAEVPGHAVGRDIGDAVDRPWTAVMRVP

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Crispr_ID: NZ_CP023696_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_5

1521474-1521712

Orphan

Consensus_repeat	Method
CGGGGTCCGCGGAAGACTCGGGG	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP023696_5

>merge|NZ_CP023696|5|1521474-1521712|CRISPRCasFinder
CGGGGCCCGCGGAGTGCGGCGGGGCCGCGCACAGCGCGGGGCCCTCGTGGCCCGCCCGGGCCGCGGACGACGCGGGGTCCGCGGAAGACTCGGGGCCCGCAGAGGACTCGGGGCCCGCGGAAGACGCGGGGGCCGCAGAGGACTCGGGGTCCGCGGAAGACGCGGGGGCCGCGGAAGACTGGGGCCCCGAAAGGCCCGCGTGGGGCGCGAGGGGCGGAGGGTCCGCGTACGGCGCGGGG

>NZ_CP023696|5|5|1521474-1521712|CRISPRCasFinder
CGGGGCCCGCGGAGTGCGGCGGG	GCCGCGCACAGCGCGGGGCCCTCGTGGCCCG
CCCGGGCCGCGGACGACGCGGGG	TCCGCGGAAGACTCGGGGCCCGCAGAGGACT
CGGGGCCCGCGGAAGACGCGGGG	GCCGCAGAGGACTCGGGGTCCGCGGAAGACG
CGGGGGCCGCGGAAGACTGGGGC	CCCGAAAGGCCCGCGTGGGGCGCGAGGGGCG
GAGGGTCCGCGTACGGCGCGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_078915308.1\|1516581_1517607_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|372611
NZ_CP023696.1\|WP_031128460.1\|1514433_1515360_+\|ribokinase	unknown	unknown	gnl\|CDD\|238579
NZ_CP023696.1\|WP_031128444.1\|1524889_1525522_+\|TIGR03085-family-protein	unknown	unknown	gnl\|CDD\|132129
NZ_CP023696.1\|WP_031128448.1\|1522234_1522924_-\|TIGR02234-family-membrane-protein	unknown	unknown	gnl\|CDD\|274046
NZ_CP023696.1\|WP_031128453.1\|1519852_1520032_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031128445.1\|1524455_1524806_-\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234598
NZ_CP023696.1\|WP_031128455.1\|1517670_1518486_-\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP023696.1\|WP_031128442.1\|1526221_1526992_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP023696.1\|WP_037936412.1\|1508477_1513040_-\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968
NZ_CP023696.1\|WP_031128439.1\|1528157_1528799_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|237290
NZ_CP023696.1\|WP_031128449.1\|1521850_1522102_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031128441.1\|1526988_1527396_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100011
NZ_CP023696.1\|WP_031128459.1\|1515423_1516461_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|237284
NZ_CP023696.1\|WP_031128446.1\|1522929_1524444_-\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184152
NZ_CP023696.1\|WP_031128454.1\|1518482_1519766_-\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP023696.1\|WP_031128461.1\|1513485_1514214_-\|membrane-protein	unknown	unknown	gnl\|CDD\|153124
NZ_CP023696.1\|WP_031128443.1\|1525526_1525913_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319924
NZ_CP023696.1\|WP_031128440.1\|1527392_1528118_-\|bifunctional-1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase/phosphoribosylanthranilate-isomerase-PriA	unknown	unknown	gnl\|CDD\|237589
NZ_CP023696.1\|WP_037936407.1\|1520098_1520908_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP023696.1\|WP_031128463.1\|1507024_1508485_-\|glutamate-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|237213

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_078915308.1\|1516581_1517607_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|372611	pfam13462, Thioredoxin_4, Thioredoxin.	2.84156e-22
NZ_CP023696.1\|WP_031128460.1\|1514433_1515360_+\|ribokinase	gnl\|CDD\|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	4.29338e-116
NZ_CP023696.1\|WP_031128444.1\|1524889_1525522_+\|TIGR03085-family-protein	gnl\|CDD\|132129	TIGR03085, TIGR03085, TIGR03085 family protein. This family, like pfam07398 and TIGRFAMs family TIGR03084, belongs to the larger set of probable enzymes defined in family TIGR03083. Members are found primarily in the Actinobacteria (Mycobacterium, Streptomyces, etc.). The family is uncharacterized. [Hypothetical proteins, Conserved].	1.36484e-80
NZ_CP023696.1\|WP_031128448.1\|1522234_1522924_-\|TIGR02234-family-membrane-protein	gnl\|CDD\|274046	TIGR02234, conserved_hypothetical_protein, trp region conserved hypothetical membrane protein. Members of this family are predicted transmembrane proteins with four membrane-spanning helices. Members are found in the Actinobacteria (Mycobacterium, Corynebacterium, Streptomyces), always associated with genes for tryptophan biosynthesis.	4.93145e-30
NZ_CP023696.1\|WP_031128445.1\|1524455_1524806_-\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|234598	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed.	8.6243e-68
NZ_CP023696.1\|WP_031128455.1\|1517670_1518486_-\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	7.14584e-116
NZ_CP023696.1\|WP_031128442.1\|1526221_1526992_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	9.73135e-170
NZ_CP023696.1\|WP_037936412.1\|1508477_1513040_-\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0
NZ_CP023696.1\|WP_031128463.1\|1507024_1508485_-\|glutamate-synthase-subunit-beta	gnl\|CDD\|237213	PRK12810, gltD, glutamate synthase subunit beta; Reviewed.	0
NZ_CP023696.1\|WP_031128439.1\|1528157_1528799_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|237290	PRK13146, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	1.44393e-112
NZ_CP023696.1\|WP_031128441.1\|1526988_1527396_-\|RidA-family-protein	gnl\|CDD\|100011	cd06154, YjgF_YER057c_UK114_like_6, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.4538e-44
NZ_CP023696.1\|WP_031128459.1\|1515423_1516461_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|237284	PRK13108, PRK13108, prolipoprotein diacylglyceryl transferase; Reviewed.	9.07051e-112
NZ_CP023696.1\|WP_031128454.1\|1518482_1519766_-\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP023696.1\|WP_031128461.1\|1513485_1514214_-\|membrane-protein	gnl\|CDD\|153124	cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. .	5.31574e-93
NZ_CP023696.1\|WP_031128443.1\|1525526_1525913_+\|hypothetical-protein	gnl\|CDD\|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	9.35847e-33
NZ_CP023696.1\|WP_031128440.1\|1527392_1528118_-\|bifunctional-1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase/phosphoribosylanthranilate-isomerase-PriA	gnl\|CDD\|237589	PRK14024, PRK14024, phosphoribosyl isomerase A; Provisional.	1.65638e-160
NZ_CP023696.1\|WP_037936407.1\|1520098_1520908_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	3.03999e-128
NZ_CP023696.1\|WP_031128446.1\|1522929_1524444_-\|anthranilate-synthase-component-I	gnl\|CDD\|184152	PRK13571, PRK13571, anthranilate synthase component I; Provisional.	0

>NZ_CP023696.1|WP_037936407.1|1520098_1520908_-|indole-3-glycerol-phosphate-synthase-TrpC
MSVLDEIIEGVRADLAERQARVSLDELKERAAKAPQARDGAAALRGEGVKVICEVKRSSPSKGALAAIADPAGLAADYEAGGAAVISVLTEQRRFGGSLADLEAVRARVDVPVLRKDFIVTAYQLWEARAYGADVALLIVAALDQPALVSLIERAESIGLTPLVEVHDEEEAERAVDAGARVIGVNARNLKTLKVDRSTFERVAPEIPDHIVKVAESGIRGPHDLIAYANAGADAVLVGESLVTGRDPKAAVADLVAAGAHPALRHGRD
>NZ_CP023696.1|WP_031128453.1|1519852_1520032_-|hypothetical-protein
MATPPEAYARLARGCRPRGCRAPARRVHGRRVRYVIGSEPGQVNGMRWRPPRGAGSTTA
>NZ_CP023696.1|WP_031128454.1|1518482_1519766_-|tryptophan-synthase-subunit-beta
MSSQFFRPDPEGRVPDAEGYFGAFGGKFIPEALVAAVDEVAVEYEKAKSDPEFARELDDLLAHYTGRPSALTEVPRFAEHAGGARIFLKREDLNHTGSHKINNVLGQALLTRRMGKTRVIAETGAGQHGVATATACALFGLDCTIYMGEVDTRRQALNVARMRILGAEVVAVKSGSRTLKDAINEAFRDWVANVDSTHYLFGTVAGPHPFPAMVRDFHRVIGVEARRQLLERAGRLPDAAVACVGGGSNAIGLFHAFLPDEGVRLVGCEPAGHGVESGEHAATLTAGEPGILHGSRSYVLQDDEGQITEPYSISAGLDYPGIGPEHAHLKDTGRAEYRAVTDDAAMHALRLLSRTEGIIPAIESAHALAGALEVGRELGQGGLIVVNLSGRGDKDMDTAARYFGLYDTDAEVAADGAGAAEIEGDAK
>NZ_CP023696.1|WP_031128455.1|1517670_1518486_-|tryptophan-synthase-subunit-alpha
MSGNIRLLSDTLAAARAEDRAALVAYLPAGFPTVEGGIEAVKAVLDGGADVVEVGLPHSDPVLDGPVIQTADDVALRGGVRIADVMRTVREAYEATGKPVLVMTYWNPVDRYGVERFTAELAEAGGAGCILPDLPVQESGLWREHAEKHGLATVFVVAPSSRDERLATITAAGSGFVYAASLMGVTGTRESVGGQAADLVRRTRATTDLPVCVGLGVSDAAQAAEVASFADGVIVGSAFVKRLLDAEDQAAGIAAVRELAGELARGVRRTP
>NZ_CP023696.1|WP_078915308.1|1516581_1517607_-|thioredoxin-domain-containing-protein
MNEKNRAGKRSARERLQMERERERAREKRRRMVLVSAAVVGVLGLAAVVGVIAANSGGRGDTSGKGPVAAPTGATGEDQLVIPVGASDAPATLTVWEDFRCPACAMFENAFRDTIHELEAAGQLRTEYRLATIIDGNMGGSGSLNAANAAACAQNAGKFTAYHDVLFANQPQESDDAFADDAKLFELAAKVPGLDTPAFRSCVAEGTHDGWVNASNAAFQEGDFRGTPTVLLNGESIFPTKGNEQISPEKLKEWVAEANKGKKPGTLTPSAGPSASASASPQGSEQGSGQGEEPGAESGAASGQQSGEPRRQETGPKESSPGGSAESDTGSGPGFGADTAY
>NZ_CP023696.1|WP_031128459.1|1515423_1516461_-|prolipoprotein-diacylglyceryl-transferase
MDLAYIPSPSTGVINLGPVPLRGYAFCIIIGVFVAVWYGNRRWIARGGTAGTVADIAVWAVPFGLVGGRLYHVVTDYQLYFSEGRNWVDAFKIWEGGLGIWGAVALGAVGAWIGCRRRGIPLPAYADAIAPGIALAQAIGRWGNWFNQELYGRPTDLPWALRISEGVNREGGLYHPTFLYESLWCVGVALLVVWADRRFTLGHGRAFALYVAAYCAGRGWIEYMRVDDAHHILGLRLNVWTAMLVFLLAVAYIVVSARKRPGREAVVEPARKAAPVGGEATADGPAAGNGADGKGAESAEGADGADGKASEGADGKAVGGKGSEGPGTGADADGADAGAEASPKR
>NZ_CP023696.1|WP_031128460.1|1514433_1515360_+|ribokinase
MTRTTPAPPRIAVLGSTNMDLVAYVPRAPRLGETVTGRAFRTVPGGKGANQAVAAARAGARVSMLGAVGSDDLGPRLRAALAESGVDTTLLRTADGPSGTAHIVVDDDGGNAIVVVPGANASVTGLTPEDEARIAAADALLLQLELPLDAVIAGARAARRHGVRTVLTPAPARPLPRELLALVDLLVPNEHEANALSGAADPRAAADGLLRDVPEVVVTLGAAGSLYAARGARPVTVPSRPVRAVDTTAAGDTFTGALAVALAEGRPVPDALAWASAAAALSVGRAGASSSMPYREEIDALTGGPGTA
>NZ_CP023696.1|WP_031128461.1|1513485_1514214_-|membrane-protein
MSIIENEAALHVAHRDNHTHRDVNGGWLRPAVFGAMDGLVSNLALMTGVAGGAASQQTLVITGLAGLAAGAFSMAAGEYTSVASQRELVEAELDVERRELRKHPVDEMEELAALYAARGVEPELAREVAMQLSRDPEQALEIHAREELGIDPDDLPSPLVAAASSFGSFALGALLPVLPYLLGATALWPAVALALAGLFACGALVARVTARGWWYSGLRQLALGGAAAAVTYALGTAFGAVL
>NZ_CP023696.1|WP_037936412.1|1508477_1513040_-|glutamate-synthase-large-subunit
MRSDAWSPMDSRPAPQGMYDPRNEHDACGVGLVATLTGVPSHELVEQALTVLRNLEHRGATGSEPDSGDGAGILIQVPDAFLREVAGFALPEPGAYAVGAAFLPEDTADEAVSRIETLAGEEGLTVLGWREVPVTPDLLGATARATMPAFRQLFVSDGGASTGIDLDRKAFVLRKRAEIELGVYFASLSARTLVYKGMLTTGQLEPFFPDLSDRRIASALALVHSRFSTNTFPSWPLAHPYRFVAHNGEINTVKGNRNWMRARESQLVSDLFGDRELERIFPICTPDASDSASFDEVLELLHLGGRSLPHAVLMMVPEAWENHDSMDPARRAFYQYHSTMMEPWDGPACVTFTDGTQIGAVLDRNGLRPGRYWVTDDGLVVLSSEVGVLDVEPGKVVRKGRLQPGRMFLVDTAEHRIIEDDEIKAKLAAEHPYQEWLETGIITLGDLPEREHIVHTHASVTRRQQTFGYTEEELRVILAPMARTGAEPIGSMGTDSPIAALSDRPRLLFDYFTQLFAQVTNPPLDAIREELVTSLLSSLGPQGNLLEPTAASCRSVTLPFPVIDNDELAKLIHVNADGDMPGMTAVTLSGLYRVSGGGDALAARIEEICAEADAAIEDGARLIVLSDRHSDAEHAPIPSLLLTSAVHHHLIRTKQRTQVGLLVEAGDVREVHHVALLIGYGAAAVNPYLAMESVEDLVRAGTFIEGVEPEQAIRNLIHALGKGVLKVMSKMGISTVASYRGAQVFEAVGLDQGFVDTYFNGTSSKIGGAGLDVVAKEVAARHAKAYPASGIAPAHRALEIGGEYQWRREGEPHLFDPETVFRLQHATRSKRYDIFKKYTERVNEQSERLMTLRGLFGFRSDRPSIPIEEVEPASEIVKRFSTGAMSYGSISKEAHETLAIAMNQLGAKSNTGEGGEDPDRLHDPARRSAIKQVASGRFGVTSEYLVNADDIQIKMAQGAKPGEGGQLPGHKVYPWVAKTRHSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPAARIHVKLVSEVGVGTVAAGVSKAHADVVLISGHDGGTGASPLTSLKHAGGPWELGLAETQQTLLLNGLRDRIVVQTDGQLKTGRDVVIAALLGAEEFGFATAPLVVSGCVMMRVCHLDTCPVGIATQNPVLRERFSGKPEFVVNFFEFIAEEVRELLAELGFRTLDEAVGHAELLDTDRAVDHWKAQGLDLAPLFHVPELPEGAVRHQVVAQDHGLEKALDNQLIELAADALGAASPEDARPVRAQLAIRNINRTVGTMLGHEVTKRFGGAGLPDDTIDVTFTGSAGQSFGAFVPRGVTLRLEGDANDYVGKGLSGGRIVVRPDRAADHLAEYSTIAGNTIAYGATGGEIFLRGRTGERFCVRNSGALVVSEGVGDHGCEYMTGGHAVVLGETGRNFAAGMSGGVAYVVDLDPDNVNAGNLAAVEPLDDADKTWLHDVVRRHHEETGSTVAEKLLADWAAAADRFSKIIPTTYKAVLAAKDAAERAGLSETETTEKMMEAATNG
>NZ_CP023696.1|WP_031128463.1|1507024_1508485_-|glutamate-synthase-subunit-beta
MADPKGFLHHGREGAASRPVEERVKDWNEVYVPGSLLPIISKQASRCMDCGIPFCHNGCPLGNLIPEWNDFAYREDWGAAYERLHATNNFPEFTGRLCPAPCEAACVLGINQPAVTIKNVEVSIIDKAWESGNVAPQPPERLSGKTVAVIGSGPAGLAAAQQLTRAGHTVAVYERADRVGGLLRYGIPEFKMEKRHINRRIEQMRAEGTRFRTGVEIGRDLKATDLRRRYDAVVIAAGATTARDLPVPGRELKGVYQAMEYLPLANKVQEGDFVTPPITAEGKHVVVIGGGDTGADCVGTAHRQGALSVTQLEIMPRPGEKRAPHQPWPTFPMLYKVTSAHEEGGERVYSVSTTRFEGDEDGNVQWLHLIEVEFVDGKLTQKAGTERRIPAQLVTLAMGFTGTDVQNGLVEQFGLELDERGNIARDADFQTNVPGVFVAGDAGRGQSLIVWAIAEGRSAARGVDRFLTGASELPAPIRPTDRALTV
>NZ_CP023696.1|WP_031128449.1|1521850_1522102_-|hypothetical-protein
MAGSAHGHTPAAWTGVTISFIGFCVAGVFMVAANPLGFWAGIAVVLIGGVVGAAMKAAGLGQPKESREQHEARTAAGRAQAAS
>NZ_CP023696.1|WP_031128448.1|1522234_1522924_-|TIGR02234-family-membrane-protein
MGDSGCVSAASVPQPRAAGQGEAATARSGRRSLAAALLLGALGAAVVLLASGRTWTEGRVTGVGGTVTLSASGGDVTGAPTALAVVGLAALVAVLATRGAGRRVVAVLLALSGAGAAAAALVGAGDGAALDERAALTTGDTAARAVGLTQTAWPYVTAGAALLILAAGLIALRFGPAWPAMSGRYERDGGPRARSARRPEDPERPEDLWKALDRGEDPTDGPGTAAPRP
>NZ_CP023696.1|WP_031128446.1|1522929_1524444_-|anthranilate-synthase-component-I
MDLETFRKLAADRRVIPVSRRLLADGDTPVGLYRKLAGERPGTFLLESAENGRSWSRYSFVGVRSAATLTVRDGQAHWLGTPPVGVPVDGDPLQALRATVDTLQTPPMPDGPAGAGEPGSGMPPFTGGMVGYLGYDIVRRLERIGDHGADELGLPELTMLLTSDLAVLDHWDGTVLLIANAINHNDLDTGVDEAYADAVARLDAMQADLTRPAESGPAVLPPSELPPYTARWGGAAYQEAVEDIKERIRAGEAFQVVPSQRFETPCEASALDVYRVLRATNPSPYMYLLRLDGFDVVGSSPEALVKVEGGHAMVHPIAGTRPRGATPQEDQALADELIADPKERAEHLMLVDLGRNDLGRVCEPGSVEVVDFMSIERYSHVMHIVSTVTGRVAAGRTAFDVLTACFPAGTLSGAPKPRAMQIIEELEPSRRGLYGGAVGYLDFAGGSDTAIAIRTALLRDGTAYVQAGAGVVADSDPVAEDTECRNKAAAVLRAVHTANRMNRV
>NZ_CP023696.1|WP_031128445.1|1524455_1524806_-|phosphoribosyl-AMP-cyclohydrolase
MTSDLDPAIAARLKRSPDGLIPAIAQQYDTGEVLMLGWMDDEALHRTLTTGRCTYWSRSRREYWVKGDTSGHVQHVRSVALDCDADTLLVKVDQVGAACHTGARTCFDADVLPLGQ
>NZ_CP023696.1|WP_031128444.1|1524889_1525522_+|TIGR03085-family-protein
MSTHAKRERLLLADLLEAAGPDAPTLCDGWTTRDLAAHVVVRERRPDAAAGVLLGPLRDRLERVQAEFAAKPYEELVQLVRSGPPRMSPFSIKQVDEGANTVEFYVHAEDVRRAQPDWTPREIDPVFANALWARLEKTARLVGRRSPGGLVVRRPNGQTAVAHRGTPVVTVTGEPGELTLFLYGRQAAARVELDGDEGAVAAVLKARLGV
>NZ_CP023696.1|WP_031128443.1|1525526_1525913_+|hypothetical-protein
MIRIAMTSVYVDDEERAHAFYTDVLGFETRTRIDLGGALFITVGAPGQDVELLLEPGDSPIARQYTRGLREAGLPCIVFGVDDLRAEYERLRGLGVVFPQEPTEQGPILTAVLDDTVGNLVQLAQPLG
>NZ_CP023696.1|WP_031128442.1|1526221_1526992_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLAVRVIPCLDVDNGRVVKGVNFQNLRDAGDPVEMARLYDAEGADELTFLDITASSGNRETTYDVVRRTAEQVFIPLTVGGGVRSADDVDRLLRAGADKVGVNTAAIARPELIREISERFGSQVLVLSVDARRCPEGTGTPSGFEVTTHGGRRGTGIDAVEWAHRAAELGAGEILLNSMDADGTKDGYDTEMIRAVRAQVSVPVIASGGAGKLDHFPPAVDAGADAVLAASVFHFGDLRIGEVKATLRAAGHPVR
>NZ_CP023696.1|WP_031128441.1|1526988_1527396_-|RidA-family-protein
MTGTPRRVVTGAPWEEQFGYSRAVELPNGLVLVSGCTSVVDGAVVDAGPYEQAVNAFNVAFDALRQLGLGPADVVRTRMYITHARDVEEVGRAHKDLFDAVRPAASMLVVSGFVDSRLVVEVEVEAYRTNGGAAS
>NZ_CP023696.1|WP_031128440.1|1527392_1528118_-|bifunctional-1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase/phosphoribosylanthranilate-isomerase-PriA
MTTLELLPAVDVRNGQAVRLVHGESGTETSYGSPLEAALAWQRAGAEWLHLVDLDAAFGTGDNRALVAEVTGAMDIKVELSGGIRDDASLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLERLNREGCARYVVTDIAKDGTLQGPNLDLLRDVCAATDRPVVASGGVSSLDDLRAIAGLVPLGVEGAIVGKALYAKAFTLEEALAVVSG
>NZ_CP023696.1|WP_031128439.1|1528157_1528799_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MKTAKKVVVLDYGFGNVRSAERALARVGADVEITRDYDTAMNADGLLVPGVGAFSACMAGLKEARGDWIVGRRLSGGRPVMGICVGMQILFARGVEHGVETEGLDEWPGTVGPLKAPVIPHMGWNTVEPPEGSELFAGVDPGERFYFVHSYAVTDWSLETANPALRAPAVTWSTHGERFVAAVENGALWATQFHPEKSGDAGAQLLTNWLKTF

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Crispr_ID: NZ_CP023696_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_6

1956398-1956502

Orphan

Consensus_repeat	Method
TGCTCTGCCAATTGAGCTACAGGGGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_6

>merge|NZ_CP023696|6|1956398-1956502|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGATCGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGCTGCTCTGCCAATTGAGCTACAGGGGAT

>NZ_CP023696|6|6|1956398-1956502|CRISPRCasFinder
TGCTCTGCCAATTGAGCTACAGGGGAT	CGCGCTCCCCCGACTGGACTCGAACCAGTAACCTGCCGGTTAACAGCCGGC
TGCTCTGCCAATTGAGCTACAGGGGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_107067036.1\|1947109_1948540_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|372371
NZ_CP023696.1\|WP_031133575.1\|1960431_1962360_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP023696.1\|WP_031133585.1\|1953707_1953908_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031133577.1\|1958698_1960432_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP023696.1\|WP_078915729.1\|1962712_1963960_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|235640
NZ_CP023696.1\|WP_069976238.1\|1952166_1953609_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340913
NZ_CP023696.1\|WP_085921264.1\|1964076_1966008_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP023696.1\|WP_031137417.1\|1969254_1970016_-\|sirohydrochlorin-chelatase	unknown	unknown	gnl\|CDD\|225049
NZ_CP023696.1\|WP_031136498.1\|1966257_1967535_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|170080
NZ_CP023696.1\|WP_031134447.1\|1943986_1945660_+\|L-tyrosine/L-tryptophan-isonitrile-synthase-family-protein	unknown	unknown	gnl\|CDD\|225748
NZ_CP023696.1\|WP_051839787.1\|1949350_1950583_+\|O-succinylhomoserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|181244
NZ_CP023696.1\|WP_031133579.1\|1957087_1958527_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|198375
NZ_CP023696.1\|WP_140160793.1\|1951468_1952047_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023696.1\|WP_051839680.1\|1954366_1955761_+\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|214640
NZ_CP023696.1\|WP_031133581.1\|1956683_1956983_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839785.1\|1950579_1951518_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235433
NZ_CP023696.1\|WP_031133573.1\|1962452_1962725_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031136500.1\|1967653_1969015_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|235098
NZ_CP023696.1\|WP_031134442.1\|1948637_1949354_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqC	unknown	unknown	gnl\|CDD\|275114
NZ_CP023696.1\|WP_031134446.1\|1945656_1947105_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_107067036.1\|1947109_1948540_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|372371	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase. These proteins catalyze the reversible transfer of an amino group from the amino acid substrate to an acceptor alpha-keto acid. They require pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze this reaction. Trans-amination reactions are of central importance in amino acid metabolism and in links to carbohydrate and fat metabolism. This class of aminotransferases acts as dimers in a head-to-tail configuration.	0
NZ_CP023696.1\|WP_051839785.1\|1950579_1951518_+\|hypothetical-protein	gnl\|CDD\|235433	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional.	6.35954e-45
NZ_CP023696.1\|WP_031133577.1\|1958698_1960432_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.68611e-158
NZ_CP023696.1\|WP_078915729.1\|1962712_1963960_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	4.02053e-161
NZ_CP023696.1\|WP_069976238.1\|1952166_1953609_+\|MFS-transporter	gnl\|CDD\|340913	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters. This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.04364e-53
NZ_CP023696.1\|WP_085921264.1\|1964076_1966008_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP023696.1\|WP_031137417.1\|1969254_1970016_-\|sirohydrochlorin-chelatase	gnl\|CDD\|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	1.2235e-28
NZ_CP023696.1\|WP_031136498.1\|1966257_1967535_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	1.18799e-66
NZ_CP023696.1\|WP_031134447.1\|1943986_1945660_+\|L-tyrosine/L-tryptophan-isonitrile-synthase-family-protein	gnl\|CDD\|225748	COG3207, DIT1, Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism].	7.69728e-12
NZ_CP023696.1\|WP_051839787.1\|1949350_1950583_+\|O-succinylhomoserine-sulfhydrylase	gnl\|CDD\|181244	PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated.	0
NZ_CP023696.1\|WP_031133579.1\|1957087_1958527_+\|sugar-kinase	gnl\|CDD\|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	3.94221e-114
NZ_CP023696.1\|WP_140160793.1\|1951468_1952047_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.000147118
NZ_CP023696.1\|WP_051839680.1\|1954366_1955761_+\|NACHT-domain-containing-protein	gnl\|CDD\|214640	smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.	3.13617e-06
NZ_CP023696.1\|WP_031133575.1\|1960431_1962360_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP023696.1\|WP_031136500.1\|1967653_1969015_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP023696.1\|WP_031134442.1\|1948637_1949354_+\|pyrroloquinoline-quinone-biosynthesis-protein-PqqC	gnl\|CDD\|275114	TIGR04305, TENA/THI-4_family_protein, putative folate metabolism protein, CADD family. This protein family, related to but outside the family of PqqC proteins involved in PQQ biosynthesis, includes the well-studied Chlamydia protein CADD (Chlamydia protein Associating with Death Domains), which can induce apoptosis in a host cell. Other members of this family occur in Rickettsia and Wolbachia, unrelated in terms of phylogeny (both are alphaproteobacteria) but similar in living intracellularly. Local gene context in these species, although not in Trichodesmium or Nitrosomonas eutropha, suggests a role in folate metabolism, and some species with this protein lack FolE but have other folate synthesis proteins.	1.12641e-25

>NZ_CP023696.1|WP_051839680.1|1954366_1955761_+|NACHT-domain-containing-protein
MPDTAELDGIRTLDEFVLHLRALKTRTGNPSITEITRRVHRDWRREGRPRSELPARSTVGNCFQTGRRRPNPDLLLAVVRALTGDDRAVVAAWSRALHHALGEAAAGPGVRVTDRLAPPPDGPLVHTAVVAEALRLADLPGSGRTVVLEGPAGTGKTTLAHALARRLAAARRADGPVLVVDLHGTHPQAPPASPFTVLGHLLGALGVPPARVPSSTDGRSVLLRRLLAGSGTVLLLDDAYDAAQVRPLLPGPRAGHTLVTTRRLPAAWPELGGRVRVPPCDPADSLRVLRGVAGAARIDTDPRAARLIAEAVGHLPQALTLVAHHVAAHPDWPLADYHEHVVASLVLRGGMGRSFAASERSVSPEARRLLRLLTLQPAAHAAHADVTAAARLAGTGPARARALLAELVAAALVEEVGPGLYALGRMVHAYARARLRLDEPVSRVQEALARLHRPPARSAQTVGN
>NZ_CP023696.1|WP_031133585.1|1953707_1953908_-|hypothetical-protein
MAGSRWAPPRHLLGFVALLVLLFFWAYYAGVLAGRVAPGLGPGGVETGERGDRPAQEQRGGHGHGI
>NZ_CP023696.1|WP_069976238.1|1952166_1953609_+|MFS-transporter
MPPFEEETSARTPEEPGPPDPAGTGPASRAGAGAGAGADAGAPAPAAAPGGAKASRHGRTLLLVAVSLGFVIALLSSSIKNTLTAFYVSMTEDFGVSRGTFAIAPSAFMLTYAIASPVMGFVADRFGARKSLAGGLVLGGVLFLAGGLTESFAVFTLVYGVGLAVSYTAVSYVPLGVLVDEMFPPHRRGLTYAILMNGTAVGFIALLPLWIHLDEGTVWRSVFQWLGVTLLVVTVLALLLLPKEPSAAAEAPGGAAPERKSSAGMLSEVLGSRVFWTVSLAFFGCGVTMAFVDVHLVAHLDHIGLGGSVAGTTVALLGAAEIVGALIAGYYCDRGHGLKVLAGSYLVRSLSLVVLMAAPTALAANVFGLLFGITYLGTVVASSMYLINSLDARAKGLALGLMWFIHQIGAFVASEGGGISYDTLRSYDPVVVGSAVIALVSTVIVAVWLPKALRAARDGAGDPTGGGPAGGGRAEAAAER
>NZ_CP023696.1|WP_140160793.1|1951468_1952047_+|GNAT-family-N-acetyltransferase
MSTVLNWHWPDDVRAVEKDLARMLAASAADDGILGYAEAPSDAQLEGFVSGVERLVAEGAGHLLIGEDAEGVAAMCLMKTNSMPNCRHLAEVMKAYLDPRVRGTSAVFQLVAQVCERAAGAGVETLVIDVREGSKAHRVWSRFGFTSYGVLDDYARVDGVSYRGHYMRHGVRELAASVADRTRERAGTPPKG
>NZ_CP023696.1|WP_051839785.1|1950579_1951518_+|hypothetical-protein
MRALRIGIADLFSPSPDSWARYMFASAVTDAADRLGLAVEVAAYGADLTRPVAECGIAWDELPGLDGLVVTGGEPTRAAVAEEPALAVVDRILTRTADRVASTVYSCQSAHAALHLLHGLERSRLPHKRQGVFGHRVRGAGPLTAGLRGRVLVPHSRWNTVPAEALRRAGVTVALESEDGAWSLATGDDGLRHVFSQGHPEYLRETLLSEYRRDLRRYAAGQAAHLPDLPRGYLRAEAEEALLAFAEKLREQRDPLLLESFPDRAAADGVDDGWLADSRAFFANWLGALDDTSKRRLEHRAELALARRRAGR
>NZ_CP023696.1|WP_051839787.1|1949350_1950583_+|O-succinylhomoserine-sulfhydrylase
MTADDGGAPVPVNQPSRPYALATRAVRTGQYQDLSDLHSEGLALTASYVFADAEDAAEQFAGRRPGHVYVRFGNPTTAAFEQRIAAMEGADGAVAVGSGMAAYTAVALGLLSAGDHVVLGDGMFGTTPRFFRAYMEKFGVRVSVADVRDLDQWRDAVRDETAMFVLETPTNPMMHVADVRALAALAAERDVVLLVDNTLCTPVLQNPLALGADLVVHSAAKYIDGQGRCGGGVVAGRADLLKPVSEVLRTAGPSPSAFNSWVFLKSLETLPIRMREHSRNATLLAEWLEGHPAVEEVHYTGLASHPQRALADSQQSGHGGLLAFTVRGGRREAWNVVDALSLVSVTTNIGDTKSMITHPATTTHGRMAPEEQARAGIGPNLLRLSVGLEDVEDLKADLDRALRAAGGRSR
>NZ_CP023696.1|WP_031134442.1|1948637_1949354_+|pyrroloquinoline-quinone-biosynthesis-protein-PqqC
MPTDRDEFRDQLERTLHEKLTLNHPMFDILFDAEKRDLHTLQKVALQGYQLTKHFLDYIETLFYFCPKEGKHKRRLLFNLYEEETGRISKTKNHVELMQDFIRAIGVDDATRDAETALPNTQELIDYRMKACKNPETYHIGAAAVMIASEGQNLETRGAEARDGIFKRVYGLKDEDLLFFSVHQAEDVHHVRHGLDLVADICVTDRMQEEALYAVSHTCDLFYGMYEGIYQEYKAGRL
>NZ_CP023696.1|WP_107067036.1|1947109_1948540_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MTSPTTGATGTTPATTSPTATTRTTGAARPAAAATAERVRADYAALKARGLALDLTRGKPSPAQLDLSTGLLDIGAAELGPAGAGADHRNYGGLTGLPELRAIFAEVLRVPVEQLLAVGNSSLALMHDTLVHAVLFGVPGSARPWGAERTAVLCPVPGYDRHFALCEKFGLEMIPVPMRDDGPDMDEVERLAAADPGIRAIWCVPTYSNPTGAVYGPETARRLAALPAAAPDFRILWDDAYAVHHLTDEHGEHGEHEQHEQHERDEHGDHTPPGAPGTTPPGGAAPAPGILALCAEHGHPDRAFVYGSTSKITFAGAGVAFLGSSPTNVEWLTGHLSRRTIGPDKLNQLRHARFLRDAAGLRAHMARHRALLRPRFDLVERVLRERLGGLDGATWSRPRGGYFVSLDVPDGCARRTVELAAEAGIRLTPAGATFPYGRDPRDRNIRIAPTYPALDELETAMEGLAVCVLLAALERS
>NZ_CP023696.1|WP_031134446.1|1945656_1947105_+|hypothetical-protein
MTATTTTPPYRPDRIVSGSGLPALLRESPDAVPLFPHSPEPVALLTPRQLHDELLPRWREGVERQARALVRRSRGTLEVLAEETLYDGLDDPALRRAALVAELFRNHQISANAGRLDTRGLQRRIAGALAADGAPRLELAWGQSKRDVGGLKTAGRWADLAEVYAVGRLVALVLAARELSGDGRIGMTVYSGGNRFAAALFAEPELLLEYDAQRCRIADALGAPGAVDFQDFAAAKRSDPAERAEHEERVREQLAALTDADVDAQMPVMLFNVDWPRVLPAAAAGEAPHGVAMAPHVAGWLRESPDDRTPLLTRAAVSCAVSPALQARWLEVFGDQPEVLEDAVSFVLAVGRASAARYTAIARADRNAPGLAGGPHTVRLTVHEKRDRPEVPALLTLGVRGGGQLSQHVVARVPAEGPIAFGSVAETLVQAPDAAPVLLAPDEGAPRLFDWLARDGQPLCFASGPEPSVRRALAHVLDPEHG
>NZ_CP023696.1|WP_031134447.1|1943986_1945660_+|L-tyrosine/L-tryptophan-isonitrile-synthase-family-protein
MSTAMSTATTEPSAPPLVTSRRERALRDLTAEQRRSQISDGHRLIRAVRTRPFQLYSARRHATRAVTVDAEEWLAAVMPALRAAVSRTASARLDTALARARKRMNEYGVRRVGSAEAVAEALSDGKWFRTQRAHMGRAELRDRVARALRHGEPVELVFPVFSRKPFSPVKNRGVAPDTAELHSLARCAALAHTVAALSPTGCRFTVLADGRKYNRACGTPGPVVAAYQDTLRRWVTDLGADGVLRIVDYEEWVARGLGAADLGTREEYYQRRAAALADRYGRLFSAHAPRESLERLAGPADPHDARGPHDAPGPRGTPAPHGRHDPHGAHGAHDPGGVGGQLAHTFWSIATSVHYTALGTGHQDLPDGPCYPDAYQEAYALYVAHLGRPLTGPGAGGLLPAAPYGRAATDPDLHLALREEAWEAACRYVAISLTDRDLNLVRETAPRAVKLTVHGKPGELHFTTAASRDANMTAQHSTGGYALRDGRARPTFRYRIEREAAGETPVLLHGAAGRGGDGPHLLPQARLERMQQPIAYVDDPAPLLDGTFPRLLEDLEI
>NZ_CP023696.1|WP_031133581.1|1956683_1956983_+|hypothetical-protein
MRYKLTFVVGLAVGYVLGTRAGRERYEQLRQSARQLSANPAVRNAAESAAQTGRQVAGRAYHAVSEKVGDRMPESVTERVRSLREQNRGAEDDWGTSNT
>NZ_CP023696.1|WP_031133579.1|1957087_1958527_+|sugar-kinase
MGIVAGLDSSSGFTRVVVCDTDTGAVLRQGYAAHPVEPKAADVDPQAWLLSLGEAAAGGLLEGVQAIGVCAQAHGLVALDQQGAAVRPAMVGNDKRAQVAAADLVEALGGRQAWADAVGCVPQAAQPVAKLRWLARTEPEAARRVAAVLQPQDWLVWQLLGRPARRTTDRGGASGTGYWSAATGAYRPDLVELALGYRVALPEVLGPAEPAGVTPEGLLISAGTGETMAAALGLGLGPGDAVVSLGASGSVMAVHHEATADPQGLVSAFADAVGTHLPVVSTSNAVRALRGTAEMLGVEGLEELSALALKSTPGASGLVLLPYLEGERTPPLPHTAGTLSGLRRESMKPEHLARAAFEGMLCALADAMDVLRRRGVAVRRVFLLGAAAELPAVQAIAPAVFGAQVVVPQPADYTALGAARQAAWALGVAHGTLAPQAPPPWRGAAAQVFEPGDELAVGQAVRQQYGATRDQLHPGAFGG
>NZ_CP023696.1|WP_031133577.1|1958698_1960432_+|ABC-transporter-ATP-binding-protein
MLRQLLRIHLAPYKRAIALLVALQLVQTGATLYLPTLNADIIDKGVVTGDTGYILRYGGLMIAVSVVQVVGNVGAVLYGARTAAALGRDVRAAVFDRVQSFSARELGHFGAPSLITRTTNDVQQVQMLVLMAFTLMVSAPIMCVGGVVLALGQDVPLSAVLLAVVPVLGVSVSLIVLRMRPLFRLMQERLDTVNRVLREQITGNRVIRAFVRDAYERERFKGANTELTDVSMSAGRLMALMFPTVMTVVNFSSVAVVWFGAHRIADGEMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLRTETSVLPPASPVRELPRGGRLEIRGADFRYPGAEEPVLHGVDLAAGPGEVTAVIGSTGSGKSTLLGLVPRLFDVTGGRVLVNGVDVRELDPALIARTVGLVPQRPYLFSGTVATNLRYGRPDATDEELWRALETAQAADFVRELEGGLNAPVSQGGTNVSGGQRQRLAIARTLVQRPEIYLFDDSFSALDYSTDAALRAALARETADATVVIVAQRVSTIRDADRIVVLDEGRVVGVGRHHDLMAENETYREIVLSQLTEAEAA
>NZ_CP023696.1|WP_031133575.1|1960431_1962360_+|ABC-transporter-ATP-binding-protein
MAGPGMMRPGGGPGDRSADFKGSLRRLLRQLLRERAALWVMVATGVLSVALSVVGPKILGWATDLVFAGVVGRDMEEGRTKQEVVAALREKGDDGLADMLSGVDFTPGRGIDFDAVGEVLLLALAVYTVAGLLMLVSTRMSIKVINRTVYRLREDVQAKLERLPLSYFDRAQRGEVLSRATNDIDNIGQTMQQTMGQLINSVLTILGVLAMMFWISPLLALVALVTVPVSVVVAARVGKRSQPQFARQWKATGALNAHVEEMYSGHALVKVFGRQEEAAREFREQNEELYEAGFRAQFNSGIMQPLMFFISNLNYVLVAVVGGLRVASGTLSIGDVQAFIQYSRQFSMPLTQVASMANLMQSGVASAERVFELLDADEQPRSPALERPAEVRGAVRLEKVSFRYEPDRPLIEDLSLDVAPGQTVAVVGPTGAGKTTLVNLLMRFYEVTGGRIVLDGVDVARMSREELRSSIGMVLQDTWLFGGTIAENIAYGAAAGRAVTREEIEAAARAAHADRFVRTLPDGYDTVIDDEGGGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMARLAHGRTTFVIAHRLSTIRDADVILVMENGSIVEQGTHEELLATGGAYARLYAAQFAEAVAEVD
>NZ_CP023696.1|WP_031133573.1|1962452_1962725_+|hypothetical-protein
MTEGTAPDGGAPGNAPENAPGSAPEKRRGGLGVAVGLPIGVAIGVVYGAATGDMAMGVAFGVPIGMVLAIGLGRGSGGAGGSGGQQAQSR
>NZ_CP023696.1|WP_078915729.1|1962712_1963960_-|RNA-polymerase-sigma-factor
MTDRTGSDHPGGRPVQTQTLTDVAPVPDTPVRDALAGVPVQGDPVQGVPVQGDPARGGTAPGGTGPDALQDHPGALPEPEPGRGDGPGPEPEAEPAPSSVAATAATAADRAAAPASDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEEKLARTPDLDTRLALDLDRLVVRGRMAKRRLIEANLRLVVSVAKRYAGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQGRTIRVPVHVVELINRVVRVQRGLLQERGREPTAEEVAARLGLPPERIGEVLRLAQEPVSLHTPVGGEDDVALGDLIEDGDAASPAESAAFLLLREHLEAVLSILGEREREVVQLRYGLADGRPRTLEEIGRLFGVTRERIRQIESKTLGKLRDHAYAEQLRGYLD
>NZ_CP023696.1|WP_085921264.1|1964076_1966008_-|DNA-primase
MAGRINDDDVKAVRDAVPIDAVVSEYLQLRSAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAARAGITLRYEEGGYNPTHQRGERIRLIEAHKAAAAYYAGQLAGAEAEIGRRFLAERGFDQAAAEHFGVGYSPAGWDHLTRYLRGKGFSDKELILSGLSQDGRRGPIDRFRGRLMWPIRDVGGDVVGFGARRLRDDDNGPKYLNTPETPIYRKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKILRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAAETYIAIAPDGMDPCELRLVKGDDAVRELVEPRTPLFEFALRQIVGRYDLETPAGRAAALDEAAPIVARIKNVASQHEVAVELAGMLGILDTQFVVKRVAQLARWARERGGAPDGRARPGAGPRPGPRQPAGPAALGPAQPSFTGPALNLRSPAHRTERELLKLALQYPALVSPAFDAYGADEFTAPPYAAVRRTIAEAGGAAQGVDNAPDYLARVREAAADDTVRALVTELAVEAVLTRAVDEAYAGEQLVQVRLRAVDRRVREVQGSLARLGAHGDPERLAAVQNELWVLQQYAQSLRNHGASAL
>NZ_CP023696.1|WP_031136498.1|1966257_1967535_-|FAD-dependent-oxidoreductase
MVDADETFVIVGAGLAGAKAAEALRAEGFSGRVILVGDERERPYERPPLSKGYLTGKDGRDGAFVHEPGWYARHDVELHLGQPVTAIDRDGRTVRLGDGTVLGYDRLLIATGAEPRRLDVPGTDLAGVHHLRRLCHADRLQGVLAALGRDNGHLVIAGAGWIGLEVAAAARGYGAEVTVVEPAPTPLHQVVGPEIGQMFTDLHAEHGVRFHFGTRLTEIVGQDGVVLAARTDDGDEHPAHAVLAAVGAVPRTALAETAGLALADRAHGGGIAVDASLRTSDPHIFAAGDVAAAHHPLLGRRLRVEHWANALNGGPAAARAMLGRDVSYDRVPYFFSDQYDLGLEYSGWAPPGSYDQVVLRGDAGRRRFIAFWLKERRVLAGMNVNVWDVTESIQELVRAGAAGATVDPDALADPSAPLGSLPPGD
>NZ_CP023696.1|WP_031136500.1|1967653_1969015_-|deoxyguanosinetriphosphate-triphosphohydrolase
MNGTAGTTPRDSAYDAAATERWAPEPDKRPGRTAFQRDRARVLHSSALRRLAGKTQVVTPGTTPRVDASAPAGGPAASAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVEAACLAHDMGHPPFGHNGEQALNEFAEDCGGFEGNAQSLRLLTRIEPKRFVPDPATGDLVSVGLNLTRAALDAATKYPWPRGAHPAGPDAPKFGVYEDDLPVFAWARQGAPEGRTCFEAQVMDWSDDVAYSVHDFEDGLHAGHIDPALLLAEAERAEIWRVALGRYVPAATDPQELADALDRLMAQEWWPHGYDGTALAQARLKDATSQLIGRFCLAAEAATRQAYGSGRLTRYGAGLVVPRETRHECAVLKAVADRYVMQRAEQEALRADQRVVIAELADALVRRAPDGLDPQFRALFDAAPDDRARKRVVVDQIASYTDATARALHARLTAPRAAGGIR
>NZ_CP023696.1|WP_031137417.1|1969254_1970016_-|sirohydrochlorin-chelatase
MSIPTLVAVAHGSRDPRALPAVAALLDRVRALRPGLPVRLGHVELNAPLLTDTLDALPAGGDAVLVPLLFGPGHHVKHDLPRAALAAAPRTRVRVAAPLGPHPLLAEALHDRLTEAGWRPGPRARRTAGVVLAAAGSRDPESTAGTRRLAALLGERLDGVPVVPAYASAASPTVPEAVRELAARGRTRIAVASCFAAPGLFATRSAAAAPWIAAAPLGAHPALARLVLHRYDQAAGQDPARPATARAALHTTA

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Crispr_ID: NZ_CP023696_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_7

2102405-2102687

Orphan

Consensus_repeat	Method
CCGCCACAGCCACCGGGCGGGGGCGACGACCAGGTAC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP023696_7

>merge|NZ_CP023696|7|2102405-2102687|CRISPRCasFinder
TCGCCACCCCCACAGGGCCGGGGCGACGACGAGGTGCCGGACGAGCCAGGCGATGCCCGCGCCGGCCGGTGCCAGCACACCCCGCCACAGCCACCGGGCGGGGGCGACGACCAGGTACGTGAGGAGGGCGTCGGCCAGCCGTGCGAGCCCCCTCCCCACGGGGACCAGGACGCTCCGCCACAGCCACCGGGCGGGCGCGACGACCAGGTACCGCCACAGCCACCGGGCGGGCGCCACCACCAGGTACCGCCACCCCCACACGGCCGGCGCCACCACCAGGTAC

>NZ_CP023696|7|7|2102405-2102687|CRISPRCasFinder
TCGCCACCCCCACAGGGCCGGGGCGACGACGAGGTGC	CGGACGAGCCAGGCGATGCCCGCGCCGGCCGGTGCCAGCACACC
CCGCCACAGCCACCGGGCGGGGGCGACGACCAGGTAC	GTGAGGAGGGCGTCGGCCAGCCGTGCGAGCCCCCTCCCCACGGGGACCAGGACGCT
CCGCCACAGCCACCGGGCGGGCGCGACGACCAGGTAC	CGCCACAGCCACCGGGCGGGCGCCACCACCAGGTA
CCGCCACCCCCACACGGCCGGCGCCACCACCAGGTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031128589.1\|2092144_2093773_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP023696.1\|WP_031131541.1\|2113196_2113874_-\|rod-shape-determining-protein-MreD	unknown	unknown	gnl\|CDD\|274574
NZ_CP023696.1\|WP_085921316.1\|2088243_2089335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_085921313.1\|2096250_2100732_-\|ribonuclease-E/G	unknown	unknown	gnl\|CDD\|273254
NZ_CP023696.1\|WP_031128591.1\|2094794_2095913_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP023696.1\|WP_031131538.1\|2115003_2116023_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237562
NZ_CP023696.1\|WP_037937826.1\|2108115_2109633_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|225962
NZ_CP023696.1\|WP_031128585.1\|2086602_2087709_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|340819
NZ_CP023696.1\|WP_031131553.1\|2105187_2106708_-\|CYTH-and-CHAD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214880
NZ_CP023696.1\|WP_031128588.1\|2090864_2092148_-\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP023696.1\|WP_031128587.1\|2089787_2090759_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_CP023696.1\|WP_031131539.1\|2113878_2114904_-\|rod-shape-determining-protein-MreC	unknown	unknown	gnl\|CDD\|237560
NZ_CP023696.1\|WP_078915319.1\|2085212_2086388_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340828
NZ_CP023696.1\|WP_031131551.1\|2106800_2107427_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379409
NZ_CP023696.1\|WP_031128590.1\|2093784_2094798_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP023696.1\|WP_031131560.1\|2100966_2101749_-\|DUF2344-domain-containing-protein	unknown	unknown	gnl\|CDD\|378393
NZ_CP023696.1\|WP_078915590.1\|2107546_2108119_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|225937
NZ_CP023696.1\|WP_031131545.1\|2109727_2110930_-\|rod-shape-determining-protein-RodA	unknown	unknown	gnl\|CDD\|274033
NZ_CP023696.1\|WP_031131556.1\|2103119_2105042_-\|TIGR03960-family-B12-binding-radical-SAM-protein	unknown	unknown	gnl\|CDD\|188475
NZ_CP023696.1\|WP_031131543.1\|2110939_2113129_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031128589.1\|2092144_2093773_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	3.15036e-27
NZ_CP023696.1\|WP_031131541.1\|2113196_2113874_-\|rod-shape-determining-protein-MreD	gnl\|CDD\|274574	TIGR03426, shape_MreD, rod shape-determining protein MreD. Members of this protein family are the MreD protein of bacterial cell shape determination. Most rod-shaped bacteria depend on MreB and RodA to achieve either a rod shape or some other non-spherical morphology such as coil or stalk formation. MreD is encoded in an operon with MreB, and often with RodA and PBP-2 as well. It is highly hydrophobic (therefore somewhat low-complexity) and highly divergent, and therefore sometimes tricky to discover by homology, but this model finds most examples. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	3.70329e-14
NZ_CP023696.1\|WP_085921313.1\|2096250_2100732_-\|ribonuclease-E/G	gnl\|CDD\|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	1.83451e-172
NZ_CP023696.1\|WP_031128591.1\|2094794_2095913_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	4.25886e-152
NZ_CP023696.1\|WP_031131538.1\|2115003_2116023_-\|rod-shape-determining-protein	gnl\|CDD\|237562	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional.	0
NZ_CP023696.1\|WP_037937826.1\|2108115_2109633_+\|PH-domain-containing-protein	gnl\|CDD\|225962	COG3428, COG3428, Predicted membrane protein [Function unknown].	4.04828e-52
NZ_CP023696.1\|WP_031128585.1\|2086602_2087709_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.26382e-108
NZ_CP023696.1\|WP_031131553.1\|2105187_2106708_-\|CYTH-and-CHAD-domain-containing-protein	gnl\|CDD\|214880	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family. It has conserved histidines that may chelate metals.	8.10276e-38
NZ_CP023696.1\|WP_031128588.1\|2090864_2092148_-\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	8.1078e-122
NZ_CP023696.1\|WP_031128587.1\|2089787_2090759_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.03133e-131
NZ_CP023696.1\|WP_031131539.1\|2113878_2114904_-\|rod-shape-determining-protein-MreC	gnl\|CDD\|237560	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional.	1.3186e-69
NZ_CP023696.1\|WP_078915319.1\|2085212_2086388_-\|glycosyltransferase	gnl\|CDD\|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	3.70174e-42
NZ_CP023696.1\|WP_031131551.1\|2106800_2107427_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379409	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal. This family comprises the C-terminal portion of proteins that belong to the TetR family of transcriptional regulators. The C-terminus represents the regulatory region, and does not include the DNA binding helix-turn-helix domain. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. One of the target proteins is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	7.63762e-07
NZ_CP023696.1\|WP_031128590.1\|2093784_2094798_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.13251e-43
NZ_CP023696.1\|WP_031131560.1\|2100966_2101749_-\|DUF2344-domain-containing-protein	gnl\|CDD\|378393	pfam10105, DUF2344, Uncharacterized protein conserved in bacteria (DUF2344). This domain, found in various hypothetical bacterial proteins and Radical Sam domain proteins, has no known function. This domain is distantly related to tRNA pseudouridine synthases, suggesting this family may carry out a function related to RNA modification. But this family appears to lack the catalytic aspartate found in pseudouridine synthases.	1.11133e-68
NZ_CP023696.1\|WP_078915590.1\|2107546_2108119_+\|PH-domain-containing-protein	gnl\|CDD\|225937	COG3402, COG3402, Uncharacterized conserved protein [Function unknown].	8.28171e-20
NZ_CP023696.1\|WP_031131545.1\|2109727_2110930_-\|rod-shape-determining-protein-RodA	gnl\|CDD\|274033	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA. This protein is a member of the FtsW/RodA/SpoVE family (pfam01098). It is found only in species with rod (or spiral) shapes. In many species, mutation of rodA has been shown to correlate with loss of the normal rod shape. Note that RodA homologs are found, scoring below the cutoffs for this model, in a number of both rod-shaped and coccoid bacteria, including four proteins in Bacillus anthracis, for example. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Cell division].	6.83684e-127
NZ_CP023696.1\|WP_031131556.1\|2103119_2105042_-\|TIGR03960-family-B12-binding-radical-SAM-protein	gnl\|CDD\|188475	TIGR03960, radical_SAM_domain_protein, radical SAM family uncharacterized protein. This model describes a radical SAM protein, or protein region, regularly found paired with or fused to a region described by TIGR03936. PSI-BLAST analysis of TIGR03936 suggests a relationship to the tRNA pseudouridine synthase TruA, suggesting that this system may act in RNA modification. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP023696.1\|WP_031131543.1\|2110939_2113129_-\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0

>NZ_CP023696.1|WP_031131560.1|2100966_2101749_-|DUF2344-domain-containing-protein
MQRIRLRYTKRGRLRFTSHRDFQRAFERALRRAEVPMAYSAGFTPHPKVSYANAAPTGTASEAEYLEIALTAPRDPAKLRALLDESLPDGLDIVDAVEARASGLADRLTASVWELRLDGVDPADAERAAAAFLAAGTVEVQRMTKNGLRTFDARAAVAGLETAPAPADRPLDGPCAILRLVVRHVTPAVRPDDVLSGLRAVADLAPPVPAAVTRLAQGLFDEESGTVTDPLAPDREAVTASPPEAAGHAAATAPEGAGSA
>NZ_CP023696.1|WP_085921313.1|2096250_2100732_-|ribonuclease-E/G
MLEPNETGNAGVNEDNNSPSDTLPPRRRRRAASRPAGPPAAADTSAEAAETVLATAAPAAAPDAPAAPEAGDTTEAAAPARPRRRATRKATAPAVEAPQAVEAPEAAPAAEAAAPAAPVEEPAAPARPRRRATRKATAPVTSPEPQAPAAEAAPAEAPQAAEAPEAAAPAEAAAPAEEPAAPARTRRRATRKATAPAPVEEAPAVAEAPQAVEVPEAAVPAVEAAAPAEAPAPVEEPAAPARPRRRATRKATAPAPVEEPQAAEAPQVVEEPQAAEAPQAAAPVEAAAAPAEEPAAPARTRRRATRKATAPAPAEEPRAAEPEAEEAGGGESLPAATVARISADESGQVAAAEQAATRGRGRRRVSTPQFTAEPERAPERGRRPSRPAVPVFQAPVFAEPMFQTPETAAAAAAAEAREATAEVEAEEELPETAEAAAPAVEPAAERAETGGRRRRRRRGEPAETAPAAAAQAPAPEAAPLAEETAEEEAEQAAETDEQDEFEERPSRRRRRGGRRRRRGESADAEDHDESADAEGAEQGGEDESEGDEHEEEGEEGEEDATPSAAGTSSSRRRRRRRRRSGEPAADAEAPAEEDGVRTVVKVREPRPPRDKGEPSDEVQSIKGSTRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQSGERTQIGVLEDNVLVEHYVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGMAHGPRRIETALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERARLKTILKKIVPEDAGVIVRTAAEGASEDELRRDVERLQAQWEEIQRKAKTGNAPTLLYGEPDMTVRVVRDIFNEDFSKVIVSGDEAWETIHGYVSHVAPDLADRLQRWTSEVDVFATYRIDEQLMKALDRKVWLPSGGSLVIDKTEAMIVVDVNTGKFTGQGGNLEETVTRNNLEAAEEIVRQLRLRDLGGIVVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLLESFSETCVHCNGRGVIVHMEQPATSGGGGGGKKSRKRGRGGAEQPAEHAEHTHEYAHEPAEAEAGRPAEAPAPVAARRAEAPAPAAEPQQAFAPDEELYSSAAEAEAAASRGRTRRRAGRRASAPAGAPRTAEAAPVAQAPVPPVAEPVTAAEPEPAAPVAAPVTAPEPVAQAAPEAPAAEEAAAPVEPAAPQGRTRRRATRKATAPAGSPSGAEAAVLVAPAPEAPAATEAPAAESAAEAPPVTAEPAAEAPAPVAAPPRARRRVVRKVTAPAGSPSGAEEAAIVVVAAAPAAEQPAPEPEAPAAEATEPEAEVAPAAEEAEVAPAAEEAEEAPAAEEAEEAPAAEVAESEAAEKPARKTAAKKATAKKTAAKKTAAKKTAAKKTTTAKKATATKAASKTAGTAKTAKTAKTAKTAKTAATRKTAAAEQPSAPSVTAVTED
>NZ_CP023696.1|WP_031128591.1|2094794_2095913_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MPSVNEQPIPAARPVIGEEEIEAAVRVLRSGRVVQGPEVAAFEESFADLVDGRHCVAVNSGTSALHLLLMALNIGPGDEVVVPSFSFAASANAIRLVGADAVFVDIDPDTFCVDPAAVEAAITPRTAAIMPVHLYGHPAAMDRITAIADKHKLAVVEDACQAHAAALNGTPVGAFGAGGTFSFYPTKNMHSLEGGMITVADAELARTLRLLRNQGMEQRYANEIVGANVRMTDVAAAVGRVQLAKLNGWTEQRIANAAYLTEHITAPNVVTPVVAEGARHIYHQYTIRVRGDREAAMAKLTEAGVGNAVYYPTPIHRLKPYWEPDQKAGRTWDLPETEKAAAEVVSLPVHPLLTQSDLERIVTAVNALGENL
>NZ_CP023696.1|WP_031128590.1|2093784_2094798_-|Gfo/Idh/MocA-family-oxidoreductase
MTATGTLRAGLVGLGSMGRHHARVLAGLEGVQLVGVVDPMGDTNGWAQGAPVLATVEELLALGVDYAVVACPTALHEEVGLKLAEAGVCALVEKPVADTVEGARRLVEAFESRGLVAGVGHIERCNPALRSLRTRLEAGELGDVYQVVTRRQGPFPHRIADVGVVKDLATHDIDLTGWVTGQTYTSIAAHTVSKSGRPHEDMVSAVGKLSDGTMVSHLVNWLSPLKERFTSVTGERGCFVADTLTADLTFHSNAAVATEWEALRAFRGVAEGDMVRYAIPKREPLLVEHELFRDAVLGKSDDICTLRQGLRTVEVAAAVLESAATGDTVRLDGAARG
>NZ_CP023696.1|WP_031128589.1|2092144_2093773_-|glycosyltransferase-family-2-protein
MTRPDVTVVVAVYNTMPYLTECLNSLVKQSIGQGRLEIVAVDDGSTDDSGAELDRFAERYPGVVKVLHQANSGGPAAPSNRALEVATGRYVYFVGSDDHLGREALERMVKCADEHGSDVVVGKMVGTNGRYVHQALFKKSDPDISLYDSALPFTLANTKLFRRDLVEQHKLRFPEDMPVGSDQPFTIEACVRARKISVVADYTCYYAVKRGDASNITYRADHLSRLRCTAQIMEHAAELIEAGPKRDAVFRRHFTWELAKLVQDDFPSLDRAVQVELCAGIAELADAYFTDALRDAMDVRRRVRIALAQRGAVDPLIRAIRDEAEHGAPPLLLEDGRAYVRYPGFRDPALGLPDRLYEVIGEAVPGQLADGTGLVSATWEQNGDDMAVSLAVRVPVTGDTASATVRLADRAMPRSADKPGGRRVPVGTELPPSIGQSGQEPTADGDGTVLRARVPLRPVRARLGVRAYLDVAGSTYEIPVKTQGVPLPLARRWREKVPYRVSATANAKGRLVITTAPLWGPPPGGARRLRRVLSRVKRKLTR
>NZ_CP023696.1|WP_031128588.1|2090864_2092148_-|nucleotide-sugar-dehydrogenase
MNICVVALGKIGLPLAVQFADKGHKVIGADVNEKVVELVNAGTEPFPGEHDLDVKLKKAVDAGLLTATTDTAAAVAQSEAVVVVVPLFVDAEGTPDFGWMDAATRAIAQGLKPGTLVSYETTLPVGTTRTRWAPMLEEGSGLTAGEDFHLVFSPERVLTGRVFADLRRYPKLVGGIDEASGARGVAFYEQVLDFDERTDLPRPNGVWDLGTAEASELAKLAETTYRDVNIGLANQFARFADKNDIDVKKVIEACNSQPYSHIHQPGIAVGGHCIPIYPRMYLWNDPEATVVRSAREANAAMPEYAVDLLAAAYGDLKGAAVLVLGAAYRGGVKETAFSGVFPTVEALKARGAVPYVSDPMYTDEELAAHGLTPHQGETVTAAILQADHAEYRELAASDLPDVKVLVDGRRTTDPARWEGVRRVVIGG
>NZ_CP023696.1|WP_031128587.1|2089787_2090759_-|UDP-glucose-4-epimerase-GalE
MSWLITGGAGYIGSHVVRAMAGAGESVVVVDDMTGGRADRLPAGVPLEKGSVLDRDLLDRVLREHAVTGIVHIAAKKQVAESVANPLLYYRQNVEGMRVLLDAAVDAGVSRLLFSSSAAVYGSPDVDLVTERTPCAPINPYGETKLAGEWMTAAVGRAHGMATAALRYFNVAGAAAPELADDGAHNLVPMVFERLAAGRAPLVFGDDYPTPDGTCVRDYIHVADIASAHLAAARRLAADPGARLVLNVGRGEGVSVREMVRVIQEVTGLTGVAPEIGPRRPGDPARVVAAADLVHRELGWTARYGVREMVESAWRGWTLRHPA
>NZ_CP023696.1|WP_085921316.1|2088243_2089335_+|hypothetical-protein
MPAEEAPLPVLDPSVPAATGWLVRGKDGRLTAYAPGDGGVLRWTEKRPGGPDWARPELIPAPGVLPYVAVAQGADGYVHLVGLRRERLADGRTGTDVVYALQYQTGRPVRDWRPLGTPYPNDPSLAGQIGLPTAVVDTDGSLNVFVRNAGGGVCARSQAKTGAWNAWADLKGSGVHGTVSAALAGDGRVEVLAPTSAAVLRWEREKPGVRFERADDVPLRAAPDSANAAVTGPDGELTHFWHDAADRAVRAWRPSPPGGARLGDGSGTGPVAVVRTVVDGHDCTVLAHRDEETGRAALAAYPTGDEDAGVTWTLTGSPCLGAPALALDGAGRVVMAVIGTDGALWTARQKAESGLALGAWTRA
>NZ_CP023696.1|WP_031128585.1|2086602_2087709_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVISIVGARPQLVKLAPIAAAFAETEHEHFIVHTGQHYDADLSDVFFQGLGIPDPDVHLGVGSGSHGVQTGSVLSALDPVLEREKPDWVLVYGDTNSTIAGALSAVKMHLPVAHLEAGLRSFNRRMPEEHNRVLTDHCADVLLAPTEEAMRHLADEGLKDRAVLAGDVMVDICLRIRDAVLAGEHPAPALPEGIDPAQPFLLATIHRPDNTDDPERLAAIVDSLAALPLPVALLAHPRLVARAQQHGIELAKGSVHVGRPLPYAGLVAAVLASSGVVTDSGGLQKEAFLLERVTTTIRPETEWVETVGTGWNVLVPDPHALPAGEWAATVTRPAPTADKGTPYGDGRAAHNVVRILEEWQSTVRSDG
>NZ_CP023696.1|WP_078915319.1|2085212_2086388_-|glycosyltransferase
MVTPWYPTRELPFRGSFVQAMVAATAPGCDSFTVYHCDPWVAPMDAAATKAVEEANAKVMARAAHRVPTAGGAELVSFPVTTPRGQDYGAQSRNHERQLRNLLGGEPIDADVVHAHVGLPSGWAALKNARPGAKVFVTEHASFLERVFQDPEAVELYDELMHGVTGFLVVGDKVTEVLERQFPHHADKILRIPNPISFDEPRPEPVKDLRSWLYLGSVTEHKGVTWLVEAFARCHAEDPTLTLTLVGEGPLRGPLTERVAELGLGDAVKLPGSIPHEQALELMRGHDLLVHPSRYETFGMTIVEGIAAGMPVLVTRCGGPEKTLAGIEDAAGELIDVEENAESISEGYRRLRARFLDGQLDLARAQAKLAADYGYEAVAQAHYRLWFPDSP
>NZ_CP023696.1|WP_031131556.1|2103119_2105042_-|TIGR03960-family-B12-binding-radical-SAM-protein
MPESVFPQLEALLPHVQKPIQYVGGELNSTVKPWESCDVRWALMYPDAYEVGLPNQGVMILYEVLNEREGVLAERTYSVWPDLEKLMRENGVPQFTVDSHRPVKAFDVFGLSFSTELGYTNMLAALDLAGIPLEARDRDLDDPIVLAGGHAAFNPEPIADFIDAAVIGDGEQAVLEITDIIRAWKAEGRPGGREEVLFRMARTGGVYIPRFYDVEYLPDGRIGRVVPNRSGVPWRVSKHTVMDLDEWPYPKQPLVPLAETVHERMSVEIFRGCTRGCRFCQAGMITRPVRERSITGIGEMVDKGLKATGFEEVGLLSLSSADHTEIGDIAKGLADRYEDDKIGLSLPSTRVDAFNVDLANELTRNGRRSGLTFAPEGGSERMRKVINKMVSEEDLIRTVATAYGNGWRQVKLYFMCGLPTETDDDVLQIADMAMNVIAKGREVSKSNDIRCTVSIGGFVPKPHTPFQWAPQLSAEETDARLEKLRDKIRGDKKYGRSIGFRYHDGKPGIVEGLLSRGDRRVGAVIRAVYEDGGRFDGWREHFSYDRWMECADKTLPEYGVDVDWYTTRERTYEEVLPWDHLDSGLDKDWLWEDWQDALDETEVEDCRWTPCFDCGVCPQMDTSIQIGPTGKKLLPLTVVK
>NZ_CP023696.1|WP_031131553.1|2105187_2106708_-|CYTH-and-CHAD-domain-containing-protein
MSDTKREIERKYEATTDTRVPDLTRVRGVARVADAGTADLDAVYYDTPGLRLAAHSVTLRRRTGGGDPGWHLKLPVSPGVRDEIGAPLADDVPPDLAALVRAHTRGDALTPVVRLRSSRDVRHLLDDDGTLLAELSTDTVRAERLGPGGRTARWTEIEVELAEGADPALLDAVDKRLRKAGVHPATSPSKLDRALRETGTPPPAPHPAPGPDATAGDHVLAYLRAQADALATHDAGLRHDQPEALHDLRVAARRLRSALRTHRKVLDRAAIDPIARELRRLGRELGLDRDQEVLDTRIDAALHTVPRTLQLGPVRGRLTRWSAARGAGARGRVLQVLDSDRHLALLDRLDALLADPPLRPAAAKAPEKVLAKAALKDHARVAARLERALALPPGPDRDTALHATRKAAKHARYAAELAAPALGRPARRLAKDMKRLQRLLGDHQDSVVTRRALRELAVQANGAGEPSFTWGLLYAREEAEATARERELPDAWAAVRTRGLARALER
>NZ_CP023696.1|WP_031131551.1|2106800_2107427_-|TetR/AcrR-family-transcriptional-regulator
MPKKVDHEARRLEIAEALWRIASTRGLDGVSLRDVAAEADISLGRLQHYFRTKDEMLVFALRHINTLADRRIRGRVGAIAARLGQEPPPRAVLRECLVGMLPLDGKSRVGALVGAAYFARAVHDERLRGEAVEGIPRLAEFFAGLLRSAGERGELAAGRSLDPYTEAMLLISLVDGLTAYTLLGVQTGEEALERLDAHLERIFAGGGD
>NZ_CP023696.1|WP_078915590.1|2107546_2108119_+|PH-domain-containing-protein
MSLHSTPRLRPPRHRVDPLARRWWAVQALLTVSGPMLLTALALGLLSALFFPGALPWLAPLLLVTLVAPALGYLLLMPRRRCATHAWELGTHAVYAAGGWIWQRRRIAPLSQVQTVDTLRGPIQRRYGLATLTVTTASTAGAVEIAGLAEADAEELSRLIGRAASDARTAPTGLAAPVGGIGEAAPGGAA
>NZ_CP023696.1|WP_037937826.1|2108115_2109633_+|PH-domain-containing-protein
MSRHADAWRRPAARTLLVHCGWLAPPLGSLALAVLATGGRIPPGALITLAALAVSFAVVTAAGLIRWSRTRYRLTTDAFALRSGVFSRRQRTVPLPRVRNVDLTATPLHRLLGLTVVRAGTTATDGELGEITLNAVTVREAHRLKTALLARAGARAASDDVVLGRLDWRWLRYAPLTFWVFGGVGVAAGTAYRILDGIGVDLWRVTLVQDAVAELGDRALWLTVPAAVVAVTALGSLGALAVYAENWWGYRAAWTGPGTLTVRRGLLTTRSITIERSRLHGVLLREPLLLRAAGGASVTAVAGGLGDEEESHARGALLPPAPRPEALRVLAGALRAPSDLLDSVPLVPHPRAALRRRAMRGLWFAVLPATLALLALGASLTPALLHAAWIHALVATAATALLARDAHRSLGHALHGSHLLVRAGTFSRDTLALERSGIIAWTFSTSPFGRRHGLVTLTAAVAAGEHGYHIRDVAAGDAVALAMAARPGIVEDFLEPPGRPERSPG
>NZ_CP023696.1|WP_031131545.1|2109727_2110930_-|rod-shape-determining-protein-RodA
MPADNSFSVPSYGPEPGGVWARLTARDSLVRRLDWPLMFSALALSLVGALLVWSATRNRTELTQGDPYSFLLKHLLNTSIGIALMIGVIWLGHRTLRGAVPFLYALSVVLVLLVLTPLGATINGAHAWIVLGGGFSLQPSEFVKVTIILGMAMLLAARVDAGDQVHPDHRTVAKALLLAVVPMAIVMLMPDLGSVMVMVVIVLGVLLASGASNRWVFGLIGAGVAGAVLVAMLGVLDEYQLNRFAAFANPDLDPAGVGYNTNQARIAVGSGGLYGAGLFNGHQTTGQFVPEQQTDFIFTVAGEELGFIGAGTIIALLGLVMWRACRIARETTELYGTIVAAGIIAWFAFQSFENIGMTLGIMPVAGLPLPFVSYGGSSMFAVWIAIGLLQSIRSQRPIAA
>NZ_CP023696.1|WP_031131543.1|2110939_2113129_-|penicillin-binding-protein-2
MSNIPETGRTPRVQIRLIVIQVLVFSLLLTLLGRLWYLQIRNGDEYTDAARSNHVQQVVQPAVRGTILDARGVPLADNETRLVVSASRTELMRMKDRGKGVLTRLAGVLGMTPKEVMDKVRLCDSETPQPCWNGSPYQPIPVTDDATTQQALQIRERAEDFPGITAEPTAVRRYPAPGKARTAQVLGYLSPVTDEEIEKAKDTDSPFLRSDQVGRSGIERTYDKALRGKAGVTRYEVDKLGRVLGQVENDPTVPGSTLVTSIDARVQAVAEYELHQAMKTVRKEVDRVTGRPYKADAGAVVVMESKTGRVVAMASQPDYDPNVWVGGISGKEYAKFTSKDSNYPLLNRAIQGQSPAGSVFKVVSASAAVRAGYPFDDRYNCSASYSLGGRSFANFESKGHGPITLGDALKYSCNTVFYALGHKEWQRDGGLKPRKDAHDWFYRTAREFGFGSETGIDLPNEVTGRIPDRQWKQRFWEANKDAWCKQGKKGGDYVQQIAYENCLEGNQLKAFDSINFAIGQGDVLITPVQLATAYAAISNGGTLYEPTVGKAVISPDGKKIEQIEPKASGRLPVDAQTIKDLDKGLRSVVEPGGTAAWRFGGWPQDKIPMRAKTGTAQVYGKQTTSWFATYTDDYTIVMTISQGGTGSGASGPAVRNIYDALYGLDDEGNQDLKRALLPKPQQTLPKIQPDGSIEAPPIKPYDPEALKPKKAEGQDDGQQGLAGPPVWRD
>NZ_CP023696.1|WP_031131541.1|2113196_2113874_-|rod-shape-determining-protein-MreD
MRLNRILLAGTLVVVALVVQVSVLARLHLPGAVPDLVLLTVLALSMVYGHVSGALIGFTAGLLADLAPPADHAAGRYALVLCVIGYLAGLTKPETGQPRSAAGPMVMVVAAAIGSTLLYAGVGALVGDTGARNVGLVSLILTAVVYDLVLAPFTVPWIMALARRADNDPLAEAPAAGSVTAGWTAGGTGLNVGDRRGGGLRGGLRARAARNRATRAARIKGVKRL
>NZ_CP023696.1|WP_031131539.1|2113878_2114904_-|rod-shape-determining-protein-MreC
MRDTKESRLLLALLVAVAFALITVDIRGGEGSPVDGARRAAAAVFGPVESGVASAVNPIGNAVGAVRDSSERHSRIAQLEKENAELKARLGSDDRNRNRLRELDALLRTAGAGQYGIKAAEVIAIGAAQGFSWTVTIDAGAQDGIRRDMTVINGSGLVGRVTTVGPSTSTVLLASDPDFTVGTRIERTNELGFATGQGDRPLSVQLLNGKAKVKPGDRLVTFGSQADRPFVPGVPVGEVIRVDPSSGELTRRLFVRPYAGFSRLDIVGVVVQPPRTDPRDTVLPPRPKPAPTVTVTVTPSSSASPDGEQPPGEQPQGERDEQMNAQPVPGLTPRTDEQEQE
>NZ_CP023696.1|WP_031131538.1|2115003_2116023_-|rod-shape-determining-protein
MSFIGRDMAVDLGTANTLVYVRGRGIVLNEPSVVAINTNTGGILAVGAEAKKMIGRTPGNIVAVRPLKDGVIADFEITERMLRYFILKIHKRRYLARPRVVVCVPSGITGVERRAVIEASTQAGARQVHIIEEPMAAAIGSGLPVHEATGNMVVDIGGGTTEVAVISLGGIVTAQSIRVAGDELDNAIIQHVKKEYSLLLGERTAEQIKITIGSAYEIGDDEHTEIRGRDLVSGLPKTVVISASEVRRAIEEPVNAVVDAVKTTLDKCPPELSGDIMDRGIVLTGGGALLRGLDERLRQETGMPIHIAEDPLDSVALGSGKCVEEFEALQQVLDAQPRR

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Crispr_ID: NZ_CP023696_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_8

2693184-2693359

Orphan

Consensus_repeat	Method
GGCGGGCGGCTGCGCGGGCTGCCCCGGGGCGGCGGGTGGCT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023696_8

>merge|NZ_CP023696|8|2693184-2693359|CRISPRCasFinder
GGTCGGCGGCTGCGCGGGCTGCTCCGGCGCGGCGGGCGGCTGGGCCGCAGGGGCGGCCGGGGGCGCGGCGGGCGGCTGCGCGGGCTGCCCCGGGGCGGCGGGTGGCTCGCCCGCGCCCTCGCCCTTGGCGAGCGAGGCGGGCGGCTGCGCGGGCTGCCCCGGGGCGGCGGGCGGCT

>NZ_CP023696|8|8|2693184-2693359|CRISPRCasFinder
GGTCGGCGGCTGCGCGGGCTGCTCCGGCGCGGCGGGCGGCT	GGGCCGCAGGGGCGGCCGGGGGCGC
GGCGGGCGGCTGCGCGGGCTGCCCCGGGGCGGCGGGTGGCT	CGCCCGCGCCCTCGCCCTTGGCGAGCGA
GGCGGGCGGCTGCGCGGGCTGCCCCGGGGCGGCGGGCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031130579.1\|2683428_2684202_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP023696.1\|WP_150485800.1\|2689403_2691332_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP023696.1\|WP_031130574.1\|2686865_2687915_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP023696.1\|WP_031136903.1\|2688476_2689169_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP023696.1\|WP_031134858.1\|2700020_2700914_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl\|CDD\|235110
NZ_CP023696.1\|WP_031134855.1\|2700910_2701768_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP023696.1\|WP_031130581.1\|2682972_2683470_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP023696.1\|WP_031130588.1\|2677027_2679757_-\|phosphoenolpyruvate-carboxylase	unknown	unknown	gnl\|CDD\|366019
NZ_CP023696.1\|WP_031130586.1\|2680053_2681043_+\|stearoyl-CoA-9-desaturase	unknown	unknown	gnl\|CDD\|224316
NZ_CP023696.1\|WP_031136541.1\|2704724_2705180_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131830
NZ_CP023696.1\|WP_037937596.1\|2681039_2681714_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023696.1\|WP_031134863.1\|2695792_2696545_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP023696.1\|WP_031134861.1\|2697108_2698176_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031134859.1\|2698372_2699851_-\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP023696.1\|WP_069979684.1\|2701764_2703003_-\|resuscitation-promoting-factor	unknown	unknown	gnl\|CDD\|226111
NZ_CP023696.1\|WP_031130578.1\|2684641_2685823_-\|galactokinase	unknown	unknown	gnl\|CDD\|223231
NZ_CP023696.1\|WP_031130583.1\|2682015_2682843_-\|trans-aconitate-2-methyltransferase	unknown	unknown	gnl\|CDD\|184509
NZ_CP023696.1\|WP_037939792.1\|2705424_2706312_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223390
NZ_CP023696.1\|WP_031136542.1\|2703682_2704555_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635
NZ_CP023696.1\|WP_031134865.1\|2693726_2695562_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031130579.1\|2683428_2684202_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.21728e-41
NZ_CP023696.1\|WP_150485800.1\|2689403_2691332_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	2.67002e-15
NZ_CP023696.1\|WP_031130574.1\|2686865_2687915_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.19014e-113
NZ_CP023696.1\|WP_031136903.1\|2688476_2689169_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.58403e-34
NZ_CP023696.1\|WP_031134858.1\|2700020_2700914_-\|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl\|CDD\|235110	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	8.83768e-150
NZ_CP023696.1\|WP_031134855.1\|2700910_2701768_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.83879e-127
NZ_CP023696.1\|WP_031130581.1\|2682972_2683470_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.11228e-18
NZ_CP023696.1\|WP_031130588.1\|2677027_2679757_-\|phosphoenolpyruvate-carboxylase	gnl\|CDD\|366019	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase.	0
NZ_CP023696.1\|WP_031130586.1\|2680053_2681043_+\|stearoyl-CoA-9-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	6.39559e-73
NZ_CP023696.1\|WP_031136541.1\|2704724_2705180_-\|hypothetical-protein	gnl\|CDD\|131830	TIGR02783, probable_conjugal_transfer_protein_TrbL, P-type conjugative transfer protein TrbL. The TrbL protein is found in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer. TrbL is a homolog of the F-type TraG protein (which is believed to be a mating pair stabilization pore-forming protein, pfam07916) as well as the vir system VirB6 protein. [Cellular processes, Conjugation].	0.000181373
NZ_CP023696.1\|WP_037937596.1\|2681039_2681714_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.39498e-18
NZ_CP023696.1\|WP_031134863.1\|2695792_2696545_+\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	0.000895048
NZ_CP023696.1\|WP_031134859.1\|2698372_2699851_-\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	2.16351e-20
NZ_CP023696.1\|WP_069979684.1\|2701764_2703003_-\|resuscitation-promoting-factor	gnl\|CDD\|226111	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown].	9.94657e-48
NZ_CP023696.1\|WP_031130578.1\|2684641_2685823_-\|galactokinase	gnl\|CDD\|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	9.49641e-113
NZ_CP023696.1\|WP_031130583.1\|2682015_2682843_-\|trans-aconitate-2-methyltransferase	gnl\|CDD\|184509	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional.	4.55355e-116
NZ_CP023696.1\|WP_037939792.1\|2705424_2706312_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	1.17149e-109
NZ_CP023696.1\|WP_031136542.1\|2703682_2704555_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	3.12069e-99
NZ_CP023696.1\|WP_031134865.1\|2693726_2695562_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.04554e-164

>NZ_CP023696.1|WP_150485800.1|2689403_2691332_-|PQQ-binding-like-beta-propeller-repeat-protein
MTQPPPPPQQPPGPPDEPPGPPPQGGFGAPQDPPPGGFGAPQDPPPGGFGAPAPPPQGGPAYGYPQAPQPPAPGAQPPAPQPPAPQPPGAPQHPAAPQGPGVPPPGQPPTAPYGYPGQPPYQPPPGAPGQPPGYGYPTAPMHQMPPPGMPGAPAGQGGRGGLSAQMKIVIAAVVAVALIVGTGVWYASTKGGDPAPATAGGTSGGTGTDGGKADGGPAAPDGPGKEKVPGNTQAKVAFQIPVPVVTDMVTTTGSWLTDKTYVKSGVNEVVGYDPVKGAKLWSVPLPGELCASTRHVKDNKTALVFAAAKPTPQNKYPGCSEVAVLDLDAGKLLWTRSVSLDGGRKLNMSEVTIGAGTVAAAAVQGGAAWDLATGKELWRPQDNAEGCRDMGYGGGEGLVAARKCGDSDNVSVTIQNLNPATGAPVSEFKMPTGVEYASVVSTRPLVVAADVGDTAGDGSSISDFFSIDEKTGKLKAQIPADADRYAAECGATDVERCEKLVVGNNRLYLPTEQHEGGTDSRRVNEIVSFDLTTGKPTGDRLDSGDGVELYPVRMDGGNLIVYRTPGYERGGEVVSVDGGTFKETLLMKTPADRTISTIERALVGREPILYRDGRLYLADRFVSKPSTVVKETRYLALVFTTQ
>NZ_CP023696.1|WP_031136903.1|2688476_2689169_-|response-regulator-transcription-factor
MGVRLMVVDDHRLLAEALASALKLRGHRVLAAAAPAAGAAELVVSRAPEVCLLGTATPAEPGAFDPVVRIKRDRPQVAVVVLGPVPSPRGIAAAFAAGASGYVRHDERIEGVERAIMKARAGEAAVAPQLLQGAFTELLNPAATPDDEGQRLLRMLTPREVEVLVRVAEGEDTRLIAAGMGIAPSTARTHVQRVLMKLGVGSRLEAAALAARTGLLDRATAGHPRVPHPR
>NZ_CP023696.1|WP_031130574.1|2686865_2687915_-|galactose-1-phosphate-uridylyltransferase
MKKTSTRLADGRELVYYDSRDDVVRDAVDRRPLDPVSTRAEIREDVLLGDRVAIASHRQGRTHLPPADECPLCPSRDGRHTEIPDSDYDVVVFENRFPSLAGGAGRCEVVCFTPDHDASFADLTEERAALVLQAWTDRTAELAAVPGVEQVFCFENRGAEIGVTLAHPHGQVYGYPFTTPRTELMLRSAREHAARTGGGNLFDDVVRREREDGERVVLATDHWTAFVPYAARWPYEVHLYPRRRVPDLRGLDAAARGELPRVQLELLRRFDRIFGEGRPPTPYVSAWHQAPFADPRRDAFACHLELFTIRRASGKLKFLAGSESGMSVWINDVPPEAAARRLREVASAS
>NZ_CP023696.1|WP_031130578.1|2684641_2685823_-|galactokinase
MTDPGARAAEAAAARFRELYGTAPEGVWAAPGRVNLIGEYTDVNDGSVMPLALPHTALAAVARRTDGRLRVHSAQAADASPAGVVHLDAAAPGPAACMGWAAYPAGVVWALRAAGHPVTGADVHVTSTVPTGAGLSSSAALEVATALALDGLYGLGLSRPALAALAQRAENAFVGVPCGVMDQMASACCTEGHVLHLDTRDLTCRQVPFDPAAHGLALLVVDTRVRHALGDGAYAERRAGCEAGARALGVRSLREVAHARLPEALERLGDPVVRGYVRHVVTDDHRVGRVAALLDAGDLRGVGPVLTEGHASLRDDLRVSCPELDLAVSASLAAGALGARMTGGGFGGSAVVLAEAGAVEETAAAVRAAFAAEGYRAPRIFPAAPSAGARRLL
>NZ_CP023696.1|WP_031130579.1|2683428_2684202_-|response-regulator-transcription-factor
MVRIRVLVVDDHRIFAESLAAALAAEPDVDVTAAGSGPAAMRCLDRAAAEGRRFDVLLVDADLGVSAGQAVARVVPDGGAADGIVDGISLVAGVREAQPPVRIVVLAERDDPRRAALALQAGANGWVAKDCSLQRLLGVIRGVLRDETHLAPALLTGVLRELTAARRHRTESERLVESLTPREREVLRCMVAGLGRKAVAERLFLSPHTVRTHMQNVLGKLGVHSTLAAVALARRAGVGPAEPPSAGDVVERGGQLA
>NZ_CP023696.1|WP_031130581.1|2682972_2683470_+|MarR-family-transcriptional-regulator
MEDEVDRLVAAWRRERPDLDVEPLEVLSRVSRLARHLDRARRLAFAEHQLEPWEFDVLTSLRRAGAPYQLSPGQLLTQTLVTSGTMTNRIDRLAKKGLVERLPDPTDRRGVLVRLTAEGRDRADQALSGLLDQERAILSRLSRAERAGLAALLRQLTAPFDNIPG
>NZ_CP023696.1|WP_031130583.1|2682015_2682843_-|trans-aconitate-2-methyltransferase
MQSAPMWDPHQYLRHAGHRGRPFLDLLARIPELPAEKEGRPARIADIGCGPGNVTALLADRWPDARITGFDLSREMLDRAEADHAGPTPGGGAIDFRRADAARWTPDEPYDLIVSNAALQWVPGHADSFGDWLDGIVPGGTLAFQVPANFTSPSHALLAEMCESPRWRDRLGDHGRRYVHILEATEYLERLADLGCAADVWETVYAQLLQGEDPVLDWVKGTALRPVLTALGEDAEAVAEFLSHYRDLLRKAYPPGPHGTVFPYRRVFAVGRKEC
>NZ_CP023696.1|WP_037937596.1|2681039_2681714_+|TetR/AcrR-family-transcriptional-regulator
MMDGVAIDGSSTSSDKPRRGRRVRMTGAERRRQLLDIGRTLFAERGFEGTSVEEIAAKAGVSKPVVYEHFGGKEGLYAVVVDREMRRLLDMVTGALTAGHPRELLEQAAFALLDYIETDTDGFRILVRDSPVAQSTGTFASLISDIATQVEDILGLEFKARGFDSKLAPLYAQALVGMVALTGQWWLDARKPKKAEVAAHLVNLAWHGLDGLEAKPRLIGHRKS
>NZ_CP023696.1|WP_031130586.1|2680053_2681043_+|stearoyl-CoA-9-desaturase
MTMSQEVLSRSERQSERRADPPPNATLGGDSKRSVEQIALLLFIVVPFLALVAAVPLAWGWGVSWLDLGLMTAMYYIGCHGITIGFHRYFTHGSFKAKRPLRIALAIMGSLAVEGPLVRWVADHRKHHRYSDAEGDPHSPWRFGETVPALMKGLWWAHIGWMFDEEQTPQQKYAPDLIKDPALRRISRQFVLWTIVSLAIPPLVGGLVTMSWWGAFTAFFWGSLVRVALLHHVTWSINSICHAVGKRPFKSRDRSGNVWWLAVLSCGESWHNLHHADPTSARHGVLRGQVDSSARLIRWFEKLGWAYDVRWPTEDRIEARRQTASANAA
>NZ_CP023696.1|WP_031130588.1|2677027_2679757_-|phosphoenolpyruvate-carboxylase
MSSADQTPSASAELRADIRRLGDLLGETLVRQEGHELLDLVEKVRRLTREDGEAAAELLGDTDLETAARLVRAFSTYFHLANVTEQVHRGREMRARRAAEGGLLARTADMLKDGDPQHVRESIRNLNVRPVFTAHPTEAARRSVLNKLRRIAALLDEPVTAADRRRHDLRLAENIDLVWQTDELRVVRPEPADEARNAIYYLDELHAGAVGDVLEDLAAELERVGYELPPGTRPLTFGTWIGGDRDGNPNVTPAVTWEVLILQHEHGLTDAIEMIDELRGLLSNSIRYAGATQELLDSLQRDLDRLPEISPRYKRLNAEEPYRLKATCVRQKLVHTRERLAQGTPHQEGRDYLGTAELLDDLTLIQTSLREHRGGLLADGHLDRTIRTLAAFGLQLATMDVREHADAHHHALGQLFDRLGEESWRYADMPREYRQKLLAKELRSRRPLAPTPAPLDAAGQKTLGVFHTVKAAFERFGPEVIESYIISMCQGADDVFAAAVLAREAGLVDLHAGWAKIGIVPLLETTDELRAADVILDEMLADPSYRRLVSLRGDVQEVMLGYSDSSKFGGITTSQWEIHRAQRRLRDVAHRYGVRLRLFHGRGGTVGRGGGPSHDAILAQPWGTLEGEIKVTEQGEVISDKYLIPSLARENLELTVAATLQASALHTGPRQPQEALARWDAAMDTASEAAHTAYRALVEDPDLPAYFFASTPVDQLAELHLGSRPSRRPDSGAGLDGLRAIPWVFGWTQSRQIVPGWYGVGSGLKALRDAGLDDVLAEMYERWHFFRNFLSNVEMTLAKTDLRIARHYVDTLVPEPLKHVFATIEAEHALTVEQVLRVTGERELLDAQPVLKQTFAIRDAYLDPISYLQVALLKRQRDAAAADEPADPLLARALLLTVNGVAAGLRNTG
>NZ_CP023696.1|WP_031134865.1|2693726_2695562_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MAANLVNVEAVSKVYGTRALLDGVSLGVSEGDRIGVVGRNGDGKTTLIRVLARLEEADSGRVTHSGGLRLGVLTQHDSLDPAATVRHEVIGDLADHEWAGSAKIRDVLTGLFGGLDLPGFPQGLDTVIGPLSGGERRRIALAKLLIAEQDLIVLDEPTNHLDVEGIAWLAAHLRARRSALVCVTHDRWFLDQVCTRMWDVQRGAVHEYEGGYSDYVFARAERERIAATEETKRQNLVRKELAWLRRGAPARTSKPRYRIEAANELIADVPPPRDTSELMRFASARLGKTVFDLEDVTVQAGPKVLLKHLTWQLGPGDRIGLVGVNGAGKTSLLRALAEASDTQGEKQPAGGRITVGRTVRLAYLSQDVAELPPALRVLEAVQQVRDRVDLGKGREMTAGQLCERFGFTKEKQWTPVGDLSGGERRRLQLLRLLMDEPNVLFLDEPTNDLDIETLTQLEDLLDGWPGSMVVISHDRFFLERTTDRTFALLGDATLRMLPRGIDEYLERRQRMVEAAVPAGTATAAAPAAASAKAEKAAKAASAADARAAKKELQRIERQLEKIAGRESTLHDHIAQNATDFAKVAKLDAELRELAAEREDLETRWLELADDA
>NZ_CP023696.1|WP_031134863.1|2695792_2696545_+|hypothetical-protein
MRRGTGRGAGRSAGRGAVAVAAAVLLAAGCGSGGESARTDGAASGGSSPSAPASSPAPASSPAPAAVAPAAKGGTVGAAGSACPLPVAFDVAAEWQPKKVEPVGDPDLAELNELLKQGPFTMACEIDAKPAGRIGFLRVWTGGGGTGAGRGGGAAPRAALESFVTADDDAPSSAVYRDVRVGADGAVSATEVTYVVTSALLGERKPVRALAVATPRGPVVLELGGMDGEEHMAMLPAWELAKRSLTAAGG
>NZ_CP023696.1|WP_031134861.1|2697108_2698176_+|hypothetical-protein
MSEDSRDQTAPAPRRRRGARPVAIASAVAAVAAGGAFWLSGGYDGGSEAALDGACQGDLAAGRVRALLPGAALTASSELRPDGWYCTVSAGGGDGAEVRIRVRNAGEPIGSDTSLDPGAVAVPLGGGWTGSFSYGDADTGPARGRAVLLLDCGDDSGDGLLAVADARLAGERTFEDGADRARLVSALTDTARAHARRTGCDTGGDTAKPVEDVAAPAVDAKRPVARASGTCRGVVDAATARRWGAGTVAETAAEPAPVERCALGSALGAPLYTFTASYGPYGEAALAGDALPASGAAQSPAGHYRMQAECPGADGTGVYEIVPDDGLALDHASLRAALKTYASASAARHGCRPPA
>NZ_CP023696.1|WP_031134859.1|2698372_2699851_-|acyltransferase
MQPRTGAIPTARELAAATPATRDRYIDLLRVASLAVVVLGHWLMAAVTADGKVGNLLAVVPRLQILTWALQVMPVFFFVGGFAHALSYRSRPAYAAFVRGRVRRLLRPTALFAAVWGAVALAVQLAGAGGGLTGTALRLVTQPLWFIGIYLAMVAFTPPLLRLHRRWGWGAFAALAGGAAAVDGLRFAAGVPYVEFLNFALVWLAVHQLGFLRADGRLGAPWALAGAGLAGAVALVAFGPYPLSMVGMPGEKVSNMAPPTLALLCHGVWLVGAVELLRGPGTRLAARARVWRAVVAANGVAMTAFLWHLTAMLAVYGALLALGAPLPEPASAGWWAGLPLRVAAAVAVTALLVGVFQRAERPGARHPAARGDGAGGTPEASGAGGAGGPADAAGVGGTSGASGAVGAGHAGGASRATGAPGAAVAGGPGARGAAPLAVLGITLSVLGVLGLSMVGYGGLLEGRAATLIAFPVTAPQALALTLAGWLLVELRR
>NZ_CP023696.1|WP_031134858.1|2700020_2700914_-|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MSVTVRVPAKVNVQLAVGPARPDGFHDLANVFLAVSLYDRVTATRAESLRVTCEGPDADQVPLDRTNLAARAAELLAARYGIAPDVHLHIAKDIPVAGGMAGGSADGAGALLACDALWGTGASRAELLDICAELGSDVPFSLVGGAALGTGRGEHLTELPLGGTFHWVFAVADGGLSTPAVYAEFDRLTPAAPAPAASPGLLDALRTGDTAALAGALANDLQPAALSLRPSLADTLAAGTAAGALAGIVSGSGPTTAFLVKDAEAARSVAAALVASGTCRTARTATSPAPGARIVPA
>NZ_CP023696.1|WP_031134855.1|2700910_2701768_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSTTEPDALLGPADIRELAAALGVRPTKQRGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEAADRVVAVEIDDTLAAALPATITARMPERATRFSLVHSDAMDVRELPGPPPTALVANLPYNVAVPVLLHMLDRFPTIERTLVMVQAEVADRLAARPGNKVYGVPSVKANWYADVKRAGSIGRNVFWPAPNVDSGLVSLVRRDPPETTATKREVFAVVDAAFAQRRKTLRAALAGWAGSPAAAEAALLAAGVSPQARGESLTVEEFARIAEARA
>NZ_CP023696.1|WP_069979684.1|2701764_2703003_-|resuscitation-promoting-factor
MRWYVPRALVGAGFAAVLAAGGVLAADHKAVRLTVDGAPRTLHTFADDVGELLADEGIAPGAHDRVAPGPDAPLSGGDEVAVRYGRPLRLDVDGRSRRLWTTARTVDEALRGLGVRAEGARLSVSRTAPIRREGLALAVRTERALTVRADGRERTVRTHAATVAAALRGAGITLGALDTTSVPPGAFPRDGQTVTVRRVADRRTTRHETVPYAVRHVEDPGLYEGTEVVDRPGRTGLRRLTYVTRTVDGVPHRTRETGSELVREPVARIVRVGTRTRPRPSSRPARQPRPQGGAQAQERPQAPAPAPAPARSQAPAAGPGAKAPGRPASVAGADHLNWAALAQCESGGRPDAVDPSGTYGGLYQFDARTWASVGGSGLPQHASAAEQTYRAKKLYAQRGASPWPHCGRRLYR
>NZ_CP023696.1|WP_031136542.1|2703682_2704555_-|TatD-family-hydrolase
MSAKDAPPPLPEPLPVAVADSHTHLDMQSTTVEEALAKAALVGVETVVQVGCDLKGSRWAAETAERYANVHAAVALHPNEAPRIVLGDSGDGGPRQRVREAGGEAALDDALAEIDRLAALPHVKAVGETGLDYFRTGPEGKEAQERSFRAHVEIAKRHGKALVIHDREAHEDVLRVLAEEGAPERTVFHCYSGDAEMARVCAERGYFMSFAGNVTFKNAQPLRDALAVAPLELVLVETDAPFLTPAPYRGRPNAPYLVPVTVRAMAAVRGIGEEAMATALAENTARAFGY
>NZ_CP023696.1|WP_031136541.1|2704724_2705180_-|hypothetical-protein
MSEIPGVPVGHEAYSFACLRCGHGWEQAYEIEHHTDAAGRDFVVYRTDGRRVSSPLVKSTCPNCGHHSVRIMGSGRISGISGILAPGGPEARGSGATGAGATGATGASGAGATGAGATGATGASGAGATGASGQEPERRRRSSLLHPFHRD
>NZ_CP023696.1|WP_037939792.1|2705424_2706312_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MTGTLVLAGTPIGDIADAPPRLAAELAEADVVAAEDTRRLRRLTQALGVQPRGRVVSYFEGNETARTPELVEALVGGARVLLVTDAGMPSVSDPGYRLVAAAVERDVRVTAVPGPSAVLTALALSGLPVDRFCFEGFLPRKAGERLARLREVAAERRTLVYFEAPHRLDDTLAAMAEVFGAGRRAAVCRELTKTYEEVRRGGLGELAAWAAEGVRGEITVVVEGAPEPGPAELDADELVRRVRVREEAGERRKEAIAAVAAEAGLPKREVFDAVVAAKTAEKAEKAGKGEAAGRG

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Crispr_ID: NZ_CP023696_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_9

2959498-2959578

Orphan

Consensus_repeat	Method
CAGGGCGGCGAGTGCGTCGAGGTCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_9

>merge|NZ_CP023696|9|2959498-2959578|CRISPRCasFinder
CAGGGCGGCGAGTGCGTCGAGGTCGCCTTCACCAAGTCCTCCTACAGCAGCGATCAGGGCGGCGAGTGCGTGGAGGTCGCC

>NZ_CP023696|9|9|2959498-2959578|CRISPRCasFinder
CAGGGCGGCGAGTGCGTCGAGGTCGCC	TTCACCAAGTCCTCCTACAGCAGCGAT
CAGGGCGGCGAGTGCGTGGAGGTCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031131680.1\|2959761_2960982_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|377188
NZ_CP023696.1\|WP_031131691.1\|2952644_2953118_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240040
NZ_CP023696.1\|WP_031133986.1\|2967548_2968898_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023696.1\|WP_031131683.1\|2958676_2959456_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP023696.1\|WP_031133988.1\|2969160_2969919_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226789
NZ_CP023696.1\|WP_037940130.1\|2964558_2965494_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP023696.1\|WP_031131694.1\|2950583_2951165_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP023696.1\|WP_031133984.1\|2967125_2967395_+\|DUF4031-domain-containing-protein	unknown	unknown	gnl\|CDD\|379076
NZ_CP023696.1\|WP_031131687.1\|2954300_2956559_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP023696.1\|WP_031131686.1\|2956670_2957921_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366009
NZ_CP023696.1\|WP_031133982.1\|2966772_2967129_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_150485893.1\|2965629_2966679_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|224651
NZ_CP023696.1\|WP_140160812.1\|2961369_2961969_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031131677.1\|2961994_2962639_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP023696.1\|WP_031131689.1\|2953370_2954069_-\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378714
NZ_CP023696.1\|WP_031131697.1\|2948708_2948894_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839413.1\|2958089_2958536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_069976880.1\|2962899_2964246_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|181971
NZ_CP023696.1\|WP_031131692.1\|2951233_2951860_-\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP023696.1\|WP_031131695.1\|2949286_2950282_+\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031131680.1\|2959761_2960982_-\|ATP/GTP-binding-protein	gnl\|CDD\|377188	pfam03995, Inhibitor_I36, Peptidase inhibitor family I36. This domain is currently only found in a small set of S. coelicolor secreted proteins. There are four conserved cysteines that probably form two disulphide bonds. Proteins 2SCK31.15C and SCO3675 also have probable beta-propellers at their C-termini. This family includes Streptomyces nigrescens SmpI, a known peptidase inhibitor of known structure. This protein has a crystallin like fold pfam00030 and is distantly related by sequence. It is not known whether other members of this family are peptidase inhibitors.	1.50115e-18
NZ_CP023696.1\|WP_031131691.1\|2952644_2953118_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240040	cd04684, Nudix_Hydrolase_25, Contains a crystal structure of the Nudix hydrolase from Enterococcus faecalis, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.56236e-31
NZ_CP023696.1\|WP_031133986.1\|2967548_2968898_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.95056e-82
NZ_CP023696.1\|WP_031131683.1\|2958676_2959456_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.96827e-08
NZ_CP023696.1\|WP_037940130.1\|2964558_2965494_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	1.54306e-159
NZ_CP023696.1\|WP_031131694.1\|2950583_2951165_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.72532e-28
NZ_CP023696.1\|WP_031133984.1\|2967125_2967395_+\|DUF4031-domain-containing-protein	gnl\|CDD\|379076	pfam13223, DUF4031, Protein of unknown function (DUF4031). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 91 and 130 amino acids in length. There is a conserved HYD sequence motif.	3.88623e-34
NZ_CP023696.1\|WP_031131687.1\|2954300_2956559_+\|hypothetical-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	4.4562e-05
NZ_CP023696.1\|WP_031131686.1\|2956670_2957921_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|366009	pfam00296, Bac_luciferase, Luciferase-like monooxygenase.	1.58549e-46
NZ_CP023696.1\|WP_031133988.1\|2969160_2969919_-\|hypothetical-protein	gnl\|CDD\|226789	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown].	1.5064e-46
NZ_CP023696.1\|WP_150485893.1\|2965629_2966679_-\|SIS-domain-containing-protein	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.92936e-77
NZ_CP023696.1\|WP_031131677.1\|2961994_2962639_-\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	6.81756e-27
NZ_CP023696.1\|WP_031131689.1\|2953370_2954069_-\|SMI1/KNR4-family-protein	gnl\|CDD\|378714	pfam11774, Lsr2, Lsr2. Lsr2 is a small, basic DNA-bridging protein present in Mycobacterium and related actinomycetes. It is a functional homolog of the H-NS-like proteins. H-NS proteins play a role in nucleoid organisation and also function as a pleiotropic regulator of gene expression.	3.08264e-10
NZ_CP023696.1\|WP_069976880.1\|2962899_2964246_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|181971	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed.	1.57086e-98
NZ_CP023696.1\|WP_031131692.1\|2951233_2951860_-\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	3.66223e-40
NZ_CP023696.1\|WP_031131695.1\|2949286_2950282_+\|LuxR-family-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.49675e-11

>NZ_CP023696.1|WP_031131683.1|2958676_2959456_+|helix-turn-helix-domain-containing-protein
MFGRLLRFHRERAGITMEVLGKHTSYSKSQVAMIEKGERRPKDHFVRVADEVLGAQGALLEVAQEITPSGVAAWFEDYLVEEAQAAGIHMYANHVIPGLLQSPHYAEAVFRCDVPALDEDEIETGVAARIDRQKVYHRDPRPHVTYILEKITLTRPIGGREVLKDCLLHLLDIARLPNVEIQVMPEDRTTHAGLSGPFILLETAGRRRQLVYVEGQGGRYFLSEQPLLGDLFTRHGTMRAQSMSPEDSVRLIEQVAREL
>NZ_CP023696.1|WP_051839413.1|2958089_2958536_-|hypothetical-protein
MDFSEPLDSPPSWVPASGHALRHAGVHFDAVRIAGLLAEDVAYRLMTYTDFQAGPIVRELSGRRYLYFLLPPGTAGAYRWPPGEARTLTRRSGRAAYVGVPAFEGLTWPLDWRSRPTRAMPFVEPGLLHPHVTEACAEHAEAAATQGG
>NZ_CP023696.1|WP_031131686.1|2956670_2957921_-|LLM-class-flavin-dependent-oxidoreductase
MRFGLLYQLQLPRPWERDSEERLLREALEQIELADRLGYDHVWATEHHFLEEYSHSSAPEVFLAAAAARTKRIRLSHGIVTLSPSVNHPARVAERIATLDLISGGRVDFGTGQGSSQMELDGFGVDRAAKRDQWREALGVVTRMLAEEPFTGHKGRWIDVPPRNVVPKPRQRPHPPLWVGCTARPTIEAAARAGLGALALSFAAPEEAKEWADLYYEVIASDACVPAGLAVNPNFAVALPFMCHRDEETALDRGLDGAQFWSYALMYYYFLGRHRPGGSDMWRSFQEARARHGLTRDPSGAPPAPGSPEARLAEMASLRQGIGTPEQLADLVRRYEAAGVDQVIFAAQLGRNRHEHICASLRLFAQEVMPEFAARRPARDAAKRDRLAAPVRRALARREHAPTDIGDYAVGPELGA
>NZ_CP023696.1|WP_031131687.1|2954300_2956559_+|hypothetical-protein
MASARSPRRRLAASVALVLAVTVGAGVLASPGATASPAAATGAPALVPMSTTSTTSSDAALLPVGAEVVSAGETGHLTSRKDDTGATVLEWRRTADGSVTPLGSGTVGHDSGSDTVVTGDGGSVVHLRDMAPGADWSASFDLAAEFTAGAKLVGVIGRNLYVKVPTTADYHELWHLTEVDGAARKTKLSSGAYGMDYKVVASTGSRALLLGTNRVFSGAGFRTHFWQATMTVGSDEVVDRTGVESIGPWRATSTGALTADYTARVEYPSAGPRIVVDGDRVHRDFPLDAGQADARVAGILGDTLLYGVPGTADGQTPAPLYARSVTDATAEPYRLLEHHSSVAHAPDGGLLVRGATADADGLFRVWVGDDGRPAATLVADTGRVKALAVTGSQVPATVDLERPGALAPMEWTLTRADATVDVTLTHTATGRARTERLAQPASGTRFAFTWDGLLDGASAPNGAYTWQVTATRADGSGAPATASGGFRVTREANPHDYNDNGSTDVLARDASGVLWRDDLLDWPSEGGIETAQRASIGRGWQIYDRIEAAGDLAGGPVGDLVARDTSGVLWLYQGTGAGTFTARTQIGKGWQIYATLTGGSDLTGDGRANLLATDTAGDLWLYRGTGSATAPFAARVRLGGGWQVYREITAVGDIAGGAAGDLVARDAAGVLWLYQGNGAGNFLARVRVGSGWNAFTHLVGAGDVDADGRPDLVAYGPNGTHVYRSTGSATAPFSRLTTTLYTGEGTAFDTIA
>NZ_CP023696.1|WP_031131689.1|2953370_2954069_-|SMI1/KNR4-family-protein
MPPRTLVTDLAALVRLCPPPPPGRPTTIRWDAVEADLGKRLPCDYKRLAERYGPGRFSDFLSVFHPHGVTEFVGLTGPVPGRMRAHLRKDYDQGTHPVPCDPDHLFAVGSTDNGECIFWITAPDADPDAWRVAVNEARGPRWYTHDGSLTGFLVAVLSGLTRVPQFPADLLDSPAMFEPLTPSAWKTESVVPQGPIDAAAVRAWARANGIDVPARGRIPRAVLDARLQANRA
>NZ_CP023696.1|WP_031131691.1|2952644_2953118_-|NUDIX-domain-containing-protein
MSFRLAAYAVCIEDGRVLLARHVTPEGGSNWTLPGGRVEHGEDPFDAVIREVAEETGCKAVVERLLGVDSRVIPAAERNVPGDREHQNVGIFYQVCITGGQLRPEPNGETAESVWTPIPDVVELRRSSLVDIGLALAQTLPATGHVPPVPVGGLIQH
>NZ_CP023696.1|WP_031131692.1|2951233_2951860_-|TlpA-family-protein-disulfide-reductase
MTADSVTALVRRRPARRLRARVLVPAACLLLIPGCTTGSPGRGTPPTAGFTAGDDGVDRVEKARRVAAPRLTGESLQGERIDLGDYRGKVVALNVWGSWCDPCRAEAPHFAKAAKELKGEGVEFVGINTRNRDKTQPVKFEEDYGVTYPSIYDPYGELLLRFPKGSLNPQIIPSTLVIDRDGRIAARAMKALNEEQLRDMLEPVLRER
>NZ_CP023696.1|WP_031131694.1|2950583_2951165_-|GNAT-family-N-acetyltransferase
MTVEDEPFLRTDRLELRRFTVWDEPLVVGLDADPEVMRYLTGGRPTPPEEVRERVLPRLMRPYACLGGLPGFWAAREGGVFLGWFELRPVREDSADTLELGYRLRRAAWGAGYATEGARALVERAFTVLGAERVTAETMAVNTGSRRVMEKSGLGYVRTYFGEWPERIEGSEHGEVAYALTRAEWERRRGGAG
>NZ_CP023696.1|WP_031131695.1|2949286_2950282_+|LuxR-family-transcriptional-regulator
MLETLGLDGTAESVYRLMLRCPGDDEERLGSRLGIRVESVRTAQERLARLGLVQDSYEHPGRLRAVSPDLGLESLLARQSAELAAHQHRIEMSRAAAAKLISEYAGQEADAANPGVEQLVGLDAVRERLASLQRDIRHEVLSFAPDGAQTEDALRSSRPLNEQLLRRGVRMRTVYLDSMRNSAATVAHADFLTELGAEVRTVAALPTRMLIADRELALLPVDSEDTSAGAVILTGRGTLTALCALFDSIWEMAAPLGTVRRRDVNGLSGQEATALRLLAEGHTDEAIAKRLGVSHRTARRIATQLMERLGARSRFEAGVRAVQNGWLPRDR
>NZ_CP023696.1|WP_031131697.1|2948708_2948894_-|hypothetical-protein
MFPLGLVVRAAAATAVLGFAALAGSAAVASVDASSALVASASTSPAPTSTDSGEDDWTWQR
>NZ_CP023696.1|WP_031131680.1|2959761_2960982_-|ATP/GTP-binding-protein
MRVPLLRRLATLATALGLTSLGLLGATAAPAQAAISDCPSGYFCAWKTDNGTGTMYKTNADQATLGAWDNTFRSVVNRTGKYACLYDDPNHGTSGMVGVWDPDPAGTEWVHDQGNVSSLKFVATSRECVSPAYPAWYASPAPEAQGFADMNGDAQADVLVRDKAGRLWFLRGDGSGQLIGNSGWNVFNGLVRHGDLSGDGREDVIAREASTGRLWLYTGTGSGTLSGRTLIGNSGWNAMSRLVGYGDLTGDGRTDLLAVEKSTGRLWLYPGTSTGALGARKLIGNGGWNAMNALVGAGDMNGDGRPDLIAREASTGKLWLYPGGTGALGARVLVGSGGWNVMEHILGLGDINGDGNADLATSTTSAFANDTCRGVGCHLVYHGRGTGSLQPGEVVAVDWHHLNGIF
>NZ_CP023696.1|WP_140160812.1|2961369_2961969_+|hypothetical-protein
MSAVAPFTGLQAGQAPAPAGEPPGISVVQRRDDEPEGLDPERWEPREDDVERLCAALARLDYPSGFAEADIAYRLAEEFLRQVHLTRRRGHAWGESAARCRELAGAAFHDVVAGPPGHAGAPRDTAPGGPEPGLQVLGATPVGEPGPGVEPFGDEAVIALVSQGMREGLRSAGLPAGLSDRCAETAAHHAPRTPGADPS
>NZ_CP023696.1|WP_031131677.1|2961994_2962639_-|flavin-reductase-family-protein
MNGTTTEAPARPHRTITPSVLYFGTPVVLLTTENPDGTPNLAAFSSAWALGQTVVLGLGRDSRTAHNLADRHGLVVNLPSPDLWPAVERLAPLTGADPVPPEKRPVYRYEPDKFAAAGLTPQASVRVRPPRVAQCPLQLEARVRQRTRSADGSFWTVEAEVVHVHADPAVTVPDTQYVDPARWSPLVYNFRHYHGLGPELGHGFRSETAPLRTR
>NZ_CP023696.1|WP_069976880.1|2962899_2964246_-|PTS-transporter-subunit-EIIC
MGGAANVGAVAHCMTRLRLTLHDRALVRDAEVRAHPAVLGVVEEGAAYQIVLGPGTVARVTPEFQALLARSAAAPPQTPPGTQAAPATDPPHEARPVRRALRRVANVFVPLIPALIGCGVIAGLNGLLVNLGALPSLTPALTVIASGFMALIAVFVGYNTAQEFGGTPVLGGAVAAIVVYAGVAEVEVFGQPLAPGQGGVLGALAAAFLATRVEKWCRHRVPEALDVLVTPTLTVLVAGLVTVYGLMYAAGKVAAAIGTATDGLLAQGGAAAGFVLGGLFLPLVMLGLHQALIPLHATLIEQQGYTALLPVLAMAGAGQVGAALAVYVRLRRAEGLRRTIRSALPAGLLGVGEPLIYGVTLPLGRPFATACVGGAVGGGVIGLFGMWGDTVGSTAIGPSGWALFPLLSGPGGALATVGAYAAGLLAGYAAGFVTTYFFGLRGVTAPAP
>NZ_CP023696.1|WP_037940130.1|2964558_2965494_-|N-acetylmuramic-acid-6-phosphate-etherase
MNDPVREPATLRAQLGTLATEEFRPDLADVDTWPTLDIARAMNAGDRAVPEAVAAQLPRIAAAVDAIAARMARGGRLVYAGAGTAGRLGVLDASECPPTFNADPSQVVGLIAGGPDALVRSVEGAEDSAALAHEDLKALGLSERDTVVGVSASGRTPYALGAVEYGRDAGALTVGLACNTGSALAAAADLAVEVVVGPEFISGSTRLKSGTAQKLVLNMISTITMIRLGKTYGNLMVDVRATNAKLRARSHRIVAQATGASDEEIARALEATGGEVKHAVLVLLGGVDAPTAARLLAEHHGHLRAALAAAP
>NZ_CP023696.1|WP_150485893.1|2965629_2966679_-|SIS-domain-containing-protein
MPPGPPAPAGGTPGAPSAPGTPADPSAHVAPGTPARPGTHVGPTAPGPAPAPVGAAPDPLAAKVRALAPSMTRSMQRVAEAVAADPAGCAALTVTGLAERTGTSEATVVRTARALGYPGYRDLRLALAGLAAQRTSGRPPAVTSDITVDDPVEAVVAKLARDEQQTLADTAAALDTAQLAAAVTALADARRIDVYGIGASGLVAQDLAQKLLRIGLVAHAHSDPHVAVTGAVQLRTGDVAVAITHSGATADVIEPLRVAFERGATTVAVTGRPDGPVAQYADHLLTTSTARETELRPAAMSSRTSQLLVVDCLFTCVTQRTYATAAPALSASYEALAHRRTPRQRTHPR
>NZ_CP023696.1|WP_031133982.1|2966772_2967129_+|hypothetical-protein
MTEPGPLEQALHAARALVLADLTARDVAEAEIVSLVEDAVAGRRWWVEQWPEGAGYVAGLVAQDVQDALLERYGRWPLCPVCDAGDPHALDVEPELGPDPHWVCGRAGVVVAPVGGLA
>NZ_CP023696.1|WP_031133984.1|2967125_2967395_+|DUF4031-domain-containing-protein
MTLYIDPPNWPGRGRMWSHLVSDVSFEELHAGAAAIGCPPRAFDGDHYDIPAERYADAVAAGAVEVGSKELVRRLTAAGLRRPKGRPRA
>NZ_CP023696.1|WP_031133986.1|2967548_2968898_-|MFS-transporter
MPAAVYILGLSVFALGTSEFMLSGLLPPIADDMDVSIPQAGLLISAFAIGMVVGAPLLAVATLRLPRKTTLVALIATFGVGQVAGALAPSYEVLFASRVVSALACAGFWAVGAAVAIAMVRPGARARAMAVMIGGLSIANVLGVPAGAFLGEHLGWRSAFWAVGAASAVALVGVVTRIPHIPLPERKPELRRELTIYRDRQVWLAVVVTALAAGGVFCAFSYLAPLLTDVAGLASGWVPTVLGLFGAGALVGTAIGGRVADAHLFGVLLSGIAASTVLLAALALFAGNPVAAVALAFLLGVSAFYTAPALNARMFNVAGAAPTLAGATTTAAFNLGNTGGPWLGGTVIDAGLGYPATAWAGGAMTLVALGTVAVALRLHRREDRRTPSRIVTGGAAGGSARGGVAGEVPGGMAAPGGIVGDGRGGDARGGAAGVQVCAATGKGPDAVQG
>NZ_CP023696.1|WP_031133988.1|2969160_2969919_-|hypothetical-protein
MAAPLSPHPAHEELRLRWEETVRRARAGHPAEAGAEAGAEAGPGAGSGAGDGAVAGSGSAAAPPPARYADELLRRWAEPQRRYHTTDHLLAVLRRVDDLAGYADDLPAVQLAAWFHDAVYLPERDTNEERSARLAERALPELGVGPSRTAEAARLVRLTVTHDPAPGDRDGEVLCDADLAVLAGDPEAYAAYAAAVREEYGFVPDDAFRQGRAAVLRRLLTLPRLFRTPYGAEHWEPTARRNLATELGLLGG

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Crispr_ID: NZ_CP023696_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_10

3580791-3580893

Orphan

Consensus_repeat	Method
GGTCTGATGGTCCGCCGGTCCGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023696_10

>merge|NZ_CP023696|10|3580791-3580893|CRISPRCasFinder
GGGCGGACGGTGTGACGGTCCGACCACGTGACGGTCTGATGGTCCGCCGGTCCGCCGGTCCGCCGGTCCGCCGGTCTGAGGGTCTGAGGGTCCGCCGGTCCGC

>NZ_CP023696|10|10|3580791-3580893|CRISPRCasFinder
GGGCGGACGGTGTGACGGTCCGA	CCACGTGACGGTCTGAT
GGTCCGCCGGTCCGCCGGTCCGC	CGGTCCGCCGGTCTGAG
GGTCTGAGGGTCCGCCGGTCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031133921.1\|3574129_3574447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239551
NZ_CP023696.1\|WP_031130804.1\|3583638_3584796_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176865
NZ_CP023696.1\|WP_031133913.1\|3578793_3579975_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|236095
NZ_CP023696.1\|WP_031130803.1\|3584813_3585635_+\|aldose-epimerase	unknown	unknown	gnl\|CDD\|185698
NZ_CP023696.1\|WP_031130796.1\|3588895_3589315_-\|DUF3151-domain-containing-protein	unknown	unknown	gnl\|CDD\|378646
NZ_CP023696.1\|WP_031130799.1\|3586393_3587416_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|236406
NZ_CP023696.1\|WP_150485817.1\|3580484_3580769_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031130808.1\|3581327_3581867_+\|DUF2617-family-protein	unknown	unknown	gnl\|CDD\|378512
NZ_CP023696.1\|WP_078915754.1\|3578025_3578613_+\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|371210
NZ_CP023696.1\|WP_031130801.1\|3585644_3586193_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234771
NZ_CP023696.1\|WP_107460705.1\|3580199_3580430_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226728
NZ_CP023696.1\|WP_031130797.1\|3587652_3588822_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224090
NZ_CP023696.1\|WP_031133922.1\|3573815_3574133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031133917.1\|3575174_3577784_+\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP023696.1\|WP_031133919.1\|3574632_3575046_-\|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274679
NZ_CP023696.1\|WP_031130792.1\|3590041_3590953_+\|DUF3152-domain-containing-protein	unknown	unknown	gnl\|CDD\|371483
NZ_CP023696.1\|WP_037938531.1\|3572048_3572633_+\|DUF4232-domain-containing-protein	unknown	unknown	gnl\|CDD\|379419
NZ_CP023696.1\|WP_051839709.1\|3572661_3573552_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP023696.1\|WP_037937650.1\|3581898_3583584_+\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|235139
NZ_CP023696.1\|WP_031130794.1\|3589353_3589638_-\|DUF1540-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031133921.1\|3574129_3574447_+\|hypothetical-protein	gnl\|CDD\|239551	cd03469, Rieske_RO_Alpha_N, Rieske non-heme iron oxygenase (RO) family, N-terminal Rieske domain of the oxygenase alpha subunit; The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The oxygenase component may contain alpha and beta subunits, with the beta subunit having a purely structural function. Some oxygenase components contain only an alpha subunit. The oxygenase alpha subunit has two domains, an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from the reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. Reduced pyridine nucleotide is used as the initial source of two electrons for dioxygen activation.	4.55462e-09
NZ_CP023696.1\|WP_031130804.1\|3583638_3584796_+\|hypothetical-protein	gnl\|CDD\|176865	cd07823, SRPBCC_5, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.53281e-24
NZ_CP023696.1\|WP_031133913.1\|3578793_3579975_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|236095	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC.	0
NZ_CP023696.1\|WP_031130796.1\|3588895_3589315_-\|DUF3151-domain-containing-protein	gnl\|CDD\|378646	pfam11349, DUF3151, Protein of unknown function (DUF3151). This family of proteins with unknown function appears to be restricted to Actinobacteria.	7.48919e-71
NZ_CP023696.1\|WP_031130799.1\|3586393_3587416_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|236406	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional.	0
NZ_CP023696.1\|WP_031130803.1\|3584813_3585635_+\|aldose-epimerase	gnl\|CDD\|185698	cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB. Proteins similar to Escherichia coli YphB are uncharacterized members of the aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	2.31017e-56
NZ_CP023696.1\|WP_031130808.1\|3581327_3581867_+\|DUF2617-family-protein	gnl\|CDD\|378512	pfam10936, DUF2617, Protein of unknown function DUF2617. This bacterial family of proteins has no known function.	3.85671e-68
NZ_CP023696.1\|WP_078915754.1\|3578025_3578613_+\|YbjN-domain-containing-protein	gnl\|CDD\|371210	pfam10722, YbjN, Putative bacterial sensory transduction regulator. YbjN is a putative sensory transduction regulator protein found in Proteobacteria. As it is a multi-copy suppressor of the coenzyme A-associated temperature sensitivity in temperature-sensitive mutant strains of Escherichia coli the suggestion is that it both helps CoA-A1 and possibly works as a general stabilizer for some other unstable proteins. This family was expanded to subsume other related families: DUF1790, DUF1821 and DUF2596.	2.54424e-13
NZ_CP023696.1\|WP_031130801.1\|3585644_3586193_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|234771	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated.	1.56747e-62
NZ_CP023696.1\|WP_107460705.1\|3580199_3580430_+\|hypothetical-protein	gnl\|CDD\|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	0.000569256
NZ_CP023696.1\|WP_031130797.1\|3587652_3588822_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	9.48499e-144
NZ_CP023696.1\|WP_031133917.1\|3575174_3577784_+\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP023696.1\|WP_031133919.1\|3574632_3575046_-\|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	2.62129e-18
NZ_CP023696.1\|WP_031130792.1\|3590041_3590953_+\|DUF3152-domain-containing-protein	gnl\|CDD\|371483	pfam11350, DUF3152, Protein of unknown function (DUF3152). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	6.72625e-36
NZ_CP023696.1\|WP_037938531.1\|3572048_3572633_+\|DUF4232-domain-containing-protein	gnl\|CDD\|379419	pfam14016, DUF4232, Protein of unknown function (DUF4232). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 177 and 242 amino acids in length. Many members of this family are lipoproteins.	4.00778e-17
NZ_CP023696.1\|WP_051839709.1\|3572661_3573552_-\|hypothetical-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	2.9955e-06
NZ_CP023696.1\|WP_037937650.1\|3581898_3583584_+\|polyamine-aminopropyltransferase	gnl\|CDD\|235139	PRK03612, PRK03612, polyamine aminopropyltransferase.	5.08812e-177

>NZ_CP023696.1|WP_150485817.1|3580484_3580769_+|hypothetical-protein
MTAAFVVGGALLLLVAGLVALLAGGSSRSGGGSGSGGGGGGGTAAGGAVLWADSGGSDSGGWSPSCGGGSGGGADGGSAGSCGGGGGGGCGGGG
>NZ_CP023696.1|WP_107460705.1|3580199_3580430_+|hypothetical-protein
MAIGVLGLMAFAGVAVALGNASAGRRRRVASAPRRRRGGSGSGSAWADGGGGGCGGSSSCGGSSSCGGGGGGCGGS
>NZ_CP023696.1|WP_031133913.1|3578793_3579975_-|pyridoxal-phosphate-dependent-aminotransferase
MAAMTRAPLNRRLAEFGTTIFAEMSALATATGAINLGQGFPDTDGPEEIREAAVRALREGRGNQYPPGPGVPELRTAVTDHQRHRYDLAYDPDTEVLVTAGATEAVAAAMLALVEPGDEVVALEPYYDSYAACVAMAGGTRVPVTLRPDAASGRFVLDLDELRAAVTDRTRLILLNTPHNPTGTVLTREELAAVAALAVERDLLVVTDEVYEHLVFDGAEHLPIAAFPGMRERTVTISSAGKTFAFTGWKVGWLTAPPELTAAVRTAKQYLTYVASGPFQYAVAEALRLPQSYFDTLRADLEGKRDLLADGLAAAGFRVYRPAGTYFVTADISGLGEKDGVAFCRALPERCGVVAIPNAVFYDHPGAGRSLIRFAFCKKEAVLREAADRLARL
>NZ_CP023696.1|WP_078915754.1|3578025_3578613_+|YbjN-domain-containing-protein
MGEDGGYPYEGNYPVSIDPSSIPNFGGQQPQPQAAGPAGPVVPDQDLVKQLLEQMELKYVVDDEGDLAAPWEDFRTYFMFRGEAEQQIFSVRTFYDRPLPVEDRAKILETIDEWNRRTLWPKVYSHLHEDEQGGATIRLIGESQMLIGMGVSVEHFVSSTVSWVRASIEFDKWMMEQLGLVEPGEGGEPAEGDEA
>NZ_CP023696.1|WP_031133917.1|3575174_3577784_+|ATP-dependent-chaperone-ClpB
MDAELTNKSRDALNAATSRAVSDGHPDLTPAHLLLALLSGQENENLTDLLAAVDADQAAVRSGAERILAGLPSVTGSTVAPPQPNRDLLAVVADAQARARELGDEYLSTEHLLIGIAAKGGPAGELLTREGADARKLLDAFTRSRGTRRVTTPDPEGQYKALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLRDKRLVALDLGAMVAGAKYRGEFEERLKTVLSEIKESDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDTIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAASRLRMEIDSSPVEIDELQRAVDRLRMEELALKNETDPGSLQRLEKLRRDLADKEEELRGLTARWEKEKQGLNRVGELKERLDDLRGQAERAQRDGDFDTASKLLYGEIPAVERELAAATEAEQEAAKTAGGAAGADKMVKEEVGPDDIADVVGSWTGIPAGRLLEGETQKLLRMEEELGRRLIGQTEAVRAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNTILVLTSNLGSQFLMEPTTTEAEKREQVLEVVRASFKPEFLNRLDDIVVFSALSRDELARIATLQVGSLARRLAERRLTLDVTPAALEWLADEGNDPAYGARPLRRLVQTAIGDRLAREILSGEVRDGDTVRVDRADGGLSVTAVR
>NZ_CP023696.1|WP_031133919.1|3574632_3575046_-|TIGR03618-family-F420-dependent-PPOX-class-oxidoreductase
MAIDLRDPGASYVSFWRERHMCTLTTLRPDGTPHVVPVGVTYDPEGGERGIARVITNRRSRKVANVLAAGPEGARAAVCQVDVGRWATLEGRAVVRSEPDVVADAVARYARRYGRTPTPNPDRVVIEIALTRAMGRA
>NZ_CP023696.1|WP_031133921.1|3574129_3574447_+|hypothetical-protein
MNVPDDSRFRREMASAYRSGWHFIDLVTAVPQGGDSLMVTLFGEPIVITRGEDEEIRAYRCLRRPRGAPQPVRCAIRYGMIFVNLDQRDHQLVGAETTTATPRSA
>NZ_CP023696.1|WP_031133922.1|3573815_3574133_+|hypothetical-protein
MTRMVRALSAIAVAAAAACGVAALNGEPSWDTVSAGSVAAGEPSWEAGPASPREPSWEVAPATFGEPSWDSGPATFGEPSWEFGPSVPGEPSWDRSVTAPAGVAA
>NZ_CP023696.1|WP_051839709.1|3572661_3573552_-|hypothetical-protein
MDLALVHPDPDDSQWLRPVPPSIALNQLIHPIEREIQQRRQRALSLADAFEPFMTIPAQTSCGSDAINVLEGLAVINAELDRVMDECSVELLTIQPGSGRKPETVKAALRRVEPLLDRGVRMRTLYQHTARHHSATMGYVERITPYGLEVRTLEEIIDRLIIVDRKIAFIPARSDRQVALELRHEGLVQYLVGVFEQFWLHGIPWEEEVVTYTPALNGISGIQRSIAKLLVEGHVDEAIARRLGMNVRTCRAHIAKLASTLGSGSRAQLGYLIARSGILDGEQDPAGAPEDATPRA
>NZ_CP023696.1|WP_037938531.1|3572048_3572633_+|DUF4232-domain-containing-protein
MRTRGSAALAAAVSGVLAVSGCVAEGGAGAGSSGPSAVARERSASPGAPSGACPESGVRVSLGDTEAAMGQRALSVFLDNCGSRPFEVGGYPDVAVLDERGEDLEVSVRLGSRAVDGGAARSEFVLRPGQRARSGVLWRNTVTRSDVVATNGASLRVAPGPGAAPQTVAPHDGPLDLGNTGTVDVLPWAPARAR
>NZ_CP023696.1|WP_031130808.1|3581327_3581867_+|DUF2617-family-protein
MLTTLQTAYTDTRAADLAWALGREALPALAALDLELGGARMQLRLLGASHQVLLEEGGGTCSETVACIPGSSTPLPLGVAKRIGSWEYEFAARVETLSRGSFAGRAQELLALVADHPHGLAGTFPGSPYAFTAMLAQRHEGKIRWRTWHAYPQEGQLVVTRTSVGFGPHGRRRDTRVGD
>NZ_CP023696.1|WP_037937650.1|3581898_3583584_+|polyamine-aminopropyltransferase
MLEAPPPVSVAPSVPEAVVPERTGPRAGRFLVLAAVFVCAACGLVYELELVALASSLTGDPVTQASVVLSVMVFAMGVGSLLAKRLRCRAAVGFGLLEAVLALAGGCSALLLYGAFAWLGGTRHALVGVSLLLGVLIGAEMPLLMTLMQRVSRCARQDAGGAVADLFAADYVGALVGGLAFPFLLLPWLGQLTTALATGAVNALAGGALVLWLFHRDLTGGERLLLWSVNAAVLAVLAGAAVLADDFERAARHAVYGAHARVAVRTHGQEVVLTGPPDGPPDLYVDGRLRVRGGDPRRHHPALVHPAMRGRHARVLVLGGGDGLAVREVLRYADVESVTVVGPDPMVVRLARTDPALARLNGHAFGDRRVRVVPAEPFHWLRTARGGTPYDVVVSDLPPPAGGAGATPYSLEFYGLAARHLAAGGRLAVHAGPLPERPRAYWTVEASLRAAGFTTRPYTVAAPAGGGAASGHAEGAAPTTVRAGAGPAAGADAGGGYDRGFVLAVPGDPRRTRPPALGVAAGVDGGGVPSAAALEAGARRMERSRPRAQPPSTLTRPRYGP
>NZ_CP023696.1|WP_031130804.1|3583638_3584796_+|hypothetical-protein
MEHEVFVPVPVPSLRAVFADPARVARCVPGLQQDADASADPLSGRLKVRAGGHTVTYRGALRLAARDDGGYDLSGEGAEARGGGGVRVALTARLTPADGGTDLAFTGTAGAEGRLAEIPADTLTTTARRLLDRFGEALAEEAGDAGRPERAEGAGGAGGAAKAGQAARADGPGTTPPDADATTGAATADATGITDATDAAGDGGGDGVPDDDHTAVKDGATASEAVRADADADVADLDNVDLDVDDDGVDDGAVGAAGPEGAAPAGGVFGTPVPPSSLDPDAADDYGDDLPGDDLRADGFPEEGPSSAGAEPPAEAAHARRTMIGRSAEEVDHAPPRGRYAPVPGPDAHGRAHALRLLVPAAALVLASAVVLVRLLRHRTRRPRA
>NZ_CP023696.1|WP_031130803.1|3584813_3585635_+|aldose-epimerase
MSEEEVRLAAGDVELTITPGNGCRVASLRVGDDELLRQGERYGSFPMVPWCGRTAGGTFLNGATRHRLPVDAPPHAIHGTGRGTAWRTVRAEKAEAAFTYDLADPWPYPGRVTQEFELTDDSLTMRMGVETYGDSFPAQAGWHPWFQRVIGGSAVEIAFTPEWQEERGDDHLPTGRRIEPRPGPWDDCFGMPDGVDVTLTWPERLELKVTSRTPWVVVYDEQEAAVCVEPQSGPPNGLNTAPRLVTPIDPLEIASTWTWRRPATGGEGRTGAA
>NZ_CP023696.1|WP_031130801.1|3585644_3586193_+|orotate-phosphoribosyltransferase
MTDARADLLQQIKDKAVVHGRVTLSSGLEADYYVDLRRITLDGAAAPLVGQVMLDLTADLDFDAVGGLTLGADPVATSMLHAAAAKGRTLDAFVVRKAAKAHGMQRRVEGPDIKGRRVLVVEDTSTTGGSPLTAVEAVREAGAEVVAVATIVDRATGAGEKISGTAGVPYRFAYALDELGLG
>NZ_CP023696.1|WP_031130799.1|3586393_3587416_+|class-II-fructose-bisphosphate-aldolase
MPIATPEVYNEMLDRAKAGKFAYPAINVTSSQTLHAALRGFAEAESDGIIQISTGGAEFLGGQHNKDMVTGAVALAEFAHIVAAKYDITVALHTDHCPKDKLDGYVRPLIAVSAERVAKGQDPLFQSHMWDGSAETLADNLAIGQELLAQAAAAKIILEVEITPTGGEEDGVTHEINDELYTTVDDAIRTAEALGLGEKGRYLLAASFGNVHGVYKPGNVVLRPELLKDLQQGVSERFGKADPFDFVFHGGSGSTQEEIATALENGVVKMNLDTDTQYAFTRPVADHMFKNYDGVLKVDGEVGSKKTYDPRTWGKLAEAGMAQRVAEACQALRSAGTKLK
>NZ_CP023696.1|WP_031130797.1|3587652_3588822_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MEHEPAYDFDTVVGIRGTGSFQWDVLPELYGEPDLVPFTISDMDFPLAPEVLDAVRRRVERGVFGYTDWRHTGFPEAVRDWYARRHGVDVDPAALVFAPSVVSQLAQLLRMWTEPGDGVVVHTPTYDGFLKALDAHGRRLRGVPVGDTEALERELARPDSRMLLLCSPHNPTGRVWTGAELAAFAALAERYDVAVVSDEIHADLTHEGHRHVPWPSVAPRGSRWALVSSGSKAFNFPALNAAYGIVGDPDDRTEFERRVERAEGLNSPSALGLAAHTAAYRHGAPWLDRLLPYVRGNLRLLADRLEEAFPGRALYAPPQAGYLAWLDLRPLGVDDEAFGQELVAREKVAVRPGAVYGADGFVRINLGCPRSKAAHGVDAVVRTLARMAV
>NZ_CP023696.1|WP_031130796.1|3588895_3589315_-|DUF3151-domain-containing-protein
MTTHKNLLGGPDPTHLPENEEAYRLLGEESQSPAEVAAQHPTFSLAWAMLADDAFEAGRVIESYAYARTGYHRGLDALRRAGWKGHGPIPWEHRPNRGFLRCLAALARAAGEIGEKDEAERCRQFLRDSSAEAYDELTR
>NZ_CP023696.1|WP_031130794.1|3589353_3589638_-|DUF1540-domain-containing-protein
MDMPVINACAVEDCAYNRDHACHALAITVGDARNPQCDTFFTSRHKGGDPSNTGRVGACKVSSCRHNTDYECRAPGITVGYQQSEVDCLTYAPA
>NZ_CP023696.1|WP_031130792.1|3590041_3590953_+|DUF3152-domain-containing-protein
MGKRGAPASRRRRGKRVPPGRGARGRGGARRPLGRIVLAGAAFGVLSLGGGAALAHWHAGGEPAAASRPAAAPPPSPGASAVRSPQPPPPSPKAGASPSPLPSKSAEEEPDPPATVPLTGAGTFTTAQASGEKTGTGPLRRYRVQVEDGSGVSAADAAREIEGILAHPRGWAAHGRGTFQLVSANADFVIRIATPKTADKLCLAQGLDTRGEYNCETTEGVVVNLKRWLRGSPTFTGTPAEYRHLIINHEVGHEIGIRTHMTCPGPGKPAPVMMQQIKGLRGCVSNAWPYDENGRYITGPVVP

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Crispr_ID: NZ_CP023696_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_11

3801020-3801114

Orphan

Consensus_repeat	Method
CCGGGCGGGCGATTCCGAGCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_11

>merge|NZ_CP023696|11|3801020-3801114|CRISPRCasFinder
CCGGCCGCGCGGTCCCGCACCGGGCGGGCGATTCCGAGCCGGGCGTGCGGTCCCGAGCAGGGCGGGCCGCACCGGACGTGCGGCTCCCCGCCGGG

>NZ_CP023696|11|11|3801020-3801114|CRISPRCasFinder
CCGGCCGCGCGGTCCCGCACCGGG	CGGGCGATTCCGAGCCGGGCGTGCGGTCCCGAGCAGGGCGGGCCGCA
CCGGACGTGCGGCTCCCCGCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031133385.1\|3796123_3796825_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236382
NZ_CP023696.1\|WP_031133387.1\|3795380_3796088_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP023696.1\|WP_031133390.1\|3793304_3794021_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP023696.1\|WP_150485821.1\|3811520_3813989_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP023696.1\|WP_037939586.1\|3799253_3799946_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|366709
NZ_CP023696.1\|WP_031137188.1\|3814544_3815060_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031137190.1\|3814150_3814414_+\|peptidase	unknown	unknown	gnl\|CDD\|227324
NZ_CP023696.1\|WP_031133389.1\|3794046_3795375_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP023696.1\|WP_031133381.1\|3798024_3798984_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP023696.1\|WP_031136442.1\|3807436_3808366_+\|Ppx/GppA-family-phosphatase	unknown	unknown	gnl\|CDD\|223326
NZ_CP023696.1\|WP_078915884.1\|3800115_3801000_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
NZ_CP023696.1\|WP_031133395.1\|3787373_3787982_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031136173.1\|3801159_3802281_-\|DNA-integrity-scanning-protein-DisA	unknown	unknown	gnl\|CDD\|237395
NZ_CP023696.1\|WP_107426940.1\|3804280_3806338_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP023696.1\|WP_031136758.1\|3809489_3811343_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP023696.1\|WP_031136440.1\|3806385_3807171_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839645.1\|3791232_3792861_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP023696.1\|WP_031133393.1\|3788412_3790938_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|214361
NZ_CP023696.1\|WP_031136444.1\|3808401_3809232_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP023696.1\|WP_031136171.1\|3802653_3804057_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031133385.1\|3796123_3796825_-\|hypothetical-protein	gnl\|CDD\|236382	PRK09111, PRK09111, DNA polymerase III subunits gamma and tau; Validated.	0.0006688
NZ_CP023696.1\|WP_031133387.1\|3795380_3796088_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.97519e-81
NZ_CP023696.1\|WP_031133390.1\|3793304_3794021_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.86294e-40
NZ_CP023696.1\|WP_150485821.1\|3811520_3813989_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.11241e-81
NZ_CP023696.1\|WP_031136171.1\|3802653_3804057_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP023696.1\|WP_031137190.1\|3814150_3814414_+\|peptidase	gnl\|CDD\|227324	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown].	1.0073e-08
NZ_CP023696.1\|WP_031133389.1\|3794046_3795375_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.80964e-31
NZ_CP023696.1\|WP_037939586.1\|3799253_3799946_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|366709	pfam01569, PAP2, PAP2 superfamily. This family includes the enzyme type 2 phosphatidic acid phosphatase (PAP2), Glucose-6-phosphatase EC:3.1.3.9, Phosphatidylglycerophosphatase B EC:3.1.3.27 and bacterial acid phosphatase EC:3.1.3.2. The family also includes a variety of haloperoxidases that function by oxidising halides in the presence of hydrogen peroxide to form the corresponding hypohalous acids.	2.14833e-17
NZ_CP023696.1\|WP_078915884.1\|3800115_3801000_+\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	8.91365e-05
NZ_CP023696.1\|WP_031136173.1\|3801159_3802281_-\|DNA-integrity-scanning-protein-DisA	gnl\|CDD\|237395	PRK13482, PRK13482, DNA integrity scanning protein DisA; Provisional.	0
NZ_CP023696.1\|WP_031133381.1\|3798024_3798984_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.86003e-79
NZ_CP023696.1\|WP_107426940.1\|3804280_3806338_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	4.56996e-09
NZ_CP023696.1\|WP_031136758.1\|3809489_3811343_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP023696.1\|WP_031136442.1\|3807436_3808366_+\|Ppx/GppA-family-phosphatase	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	7.52209e-84
NZ_CP023696.1\|WP_051839645.1\|3791232_3792861_-\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	2.42572e-130
NZ_CP023696.1\|WP_031133393.1\|3788412_3790938_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|214361	CHL00095, clpC, Clp protease ATP binding subunit.	0
NZ_CP023696.1\|WP_031136444.1\|3808401_3809232_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	2.30005e-28

>NZ_CP023696.1|WP_078915884.1|3800115_3801000_+|hypothetical-protein
MGSLRNPVGPLPSSIYWRRRAVVATVIALLAVLIVWFVSSRDSERRPGADGANAGSPAPSITPGPSPSGSAISSQPGGRDESGASGGPGGTASGGSGTGGSGSGTGGGPGAGTGGDPAGSVAGTGSGAAAGTGTGTGAGTGAGGQGGGTGSTQQVPADSPLPNCAPGALQLTLSSTKVSYAPGEKPRFRLTARNGSGAGCKTDLGPATAVLTISDEAGDEIWSSEDCPKGPGSVYVAVPGGGTATYTIEWDRRHSAPRCATPPVREAGPGTYLAEATVPGVKGVLRSSITLAKD
>NZ_CP023696.1|WP_037939586.1|3799253_3799946_-|phosphatase-PAP2-family-protein
MSEDLYRTVTDYARSTPAWVHDFAEIGTDAGLLVFGVLFVVAWWRARPADGRAVAIAALAPVATAFGYVVSETLKSLVDEERPCRAVVGAAASIAECPPYGDWSFPSNHAAIAGASAMALALAWRVIAWLTMPLAVVMAFSRVFVGVHYPHDVAAGVVLGALAVVLFVRLLTGPTQRLVETMRLSGSGAARWLAGPGPDVDLAAAVPRQRTRSRGRRAAPRRTGGRRRVS
>NZ_CP023696.1|WP_031133381.1|3798024_3798984_-|A/G-specific-adenine-glycosylase
MPSPAEAAPADRAPVGPDPGATAPATAHPAQRLHAPVLAWFEQHARDLPWRRPEAGAWGVMVSEFMLQQTPVNRVLPVYEQWMARWPRPAALAAEAPGEAVRAWGRLGYPRRALRLHGAAVAITERHGGDVPHDHAQLLALPGIGEYTAAAVASFAYGRRHPVLDTNVRRVLARAVTGVQYPPNATTAAERRLARALLPEDEATAARWAAASMELGALVCTARGEDCARCPIARACAWRLAGKPAHEGPPRRGQTYAGTDRQVRGKLLAVLREATGPVPQSALDAVWHDAVQRARALDGLVADGLVEPLDGARYRLPSA
>NZ_CP023696.1|WP_031133385.1|3796123_3796825_-|hypothetical-protein
MRGLSGEDGNGGTTPPEPGGGTAAGRAAVAGLAAVGVLGLLATGCSTGGTGARDEGAVPADQSAVSGPPTPTASASPAFRRVDVVALLKDDPKVGDQVKRDLKPCAEDAYPVDTSYGNLTGTGVADVVVNVMTCGDAVGVGTYVYRVREQRYENVFALEEPAVYSEIDRGDLVVTKQVYAKGDPIAYPSGEDVITYRWSSDRFTEHYAVHNEYSKAVEGGDISGPAPTAPSEN
>NZ_CP023696.1|WP_031133387.1|3795380_3796088_-|response-regulator-transcription-factor
MAETHVLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLEAFRARQPDIALLDVMLPGMDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLMARIRAVLRRFENAGGAAGGDAGERGGRAERGLLAFGDLEVDTEGMEVRRGGAPVALTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRAKIGQDRIETVRGFGYKLRA
>NZ_CP023696.1|WP_031133389.1|3794046_3795375_-|HAMP-domain-containing-histidine-kinase
MRQPALRTGVRWKISVAIAAVGALIAVALSLVVHNAARVSMLDNAREVQMERLLFAQRVYESSKPKEPRFGTKLNDPKLPRELDRLVERRRRGTYVEEHAAGAPDVWAAVPLGNGDVLSLHTPFADRSATVMRRLDEALVVGSVSVVLAGSALGVLIGGQLSRRLRKAAAAAGKVAQGNTEVRVRDAIGGVVRDETDELARAVDALTDALQERIEAERRVTADIAHELRTPVTGLLTAAELLPPGRPTELVRDRARAMRTLVEDVLEVARLDSASERAELQEIALGEFVGRRVALLNPDAEVRVVHESWVSTDPRRLERILGNLLTNAAKYGRPPVEVTVEGRVLRVRDHGPGFPEALLREGPSRFRTGASDRGRAGAGHGLGLTIAAGQARVLGARLTFRNAATPDGTAPEGGGAIAVLWLPEHAPTNTGSFPVLHFPDAD
>NZ_CP023696.1|WP_031133390.1|3793304_3794021_+|M23-family-metallopeptidase
MSQRAQHPTRNAVVALAAAGIGVTAVFGAGASAVAAEAKAPLAMDTAAAVAAQAQAQAQAAQQAAAAKAAQAAKAKAAKAAAVKAAAKKAAAAKKATKAAAWVKPVAGYTLTAGYNQGGAMWTNKHSGQDFAVPVGTPVKAVHGGTVVKAGPNGGGDGPAYGNAIVIKHPNGTYSQYAHLSKIGVKPGAKVKTGQLIAKSGNTGNSSGPHLHFEIRTTPNYGSSLNPATFLRAEGVVL
>NZ_CP023696.1|WP_051839645.1|3791232_3792861_-|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MRPVTRTTQTRKSSAARATALGLAALLAWTLHGFTGAPAGAGPSDTGLKGAIDEILTDPRLDGAAAGVVVADAATGAVLYRRDGGDRLMPASNTKIPTSVAAMALLGPDHRFRTEVLATGRRHAGTLHGDLYLRGTGDPTTLAADYDRLAARVAAAGIRHVTGRLVADDTRFDTRRLGRSWAADDESSYYSAQISALTLAPDTDYDSGTVIVEAAPAAPGARPTVALTPRTGYVRVDNRATTVAAGRPDTLTIERAHGTNTLVVRGEIPVGASPTKEWVTVDEPTGYATAVFADALAAHGVRVWGPTRLGLPTPASAKPVAAHESMPLKQLMHPFMKLSNNMHAEALTKAVGHRVSGRGTWEAGLEAVDAYLVKEGVDTSGLRQADGSGLSRMNLIPAQRLTDLLLAVQDAPWFADWYASLPVACAPDRAVGGTLRRRMCDTPAALNARAKTGTLTGASALSGYVADAAGRRLVYSVVLNNHLAASVKDIEDAVVVTLASSDTAAGEIRRAEPRPGLRAPAPAASLPAASLECTWHKPEPTC
>NZ_CP023696.1|WP_031133393.1|3788412_3790938_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYSGGKEAATAGGPAEGTPSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKDKHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLIDEAGSRMRIRRMTAPPDLREFDEKIAGVRREKESAIDAQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDAMISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILEDGRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDVKTGYDRMKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVDLMIAKVDERLKDRDMGIELSGDAKILLAKRGYDPVLGARPLRRTIQREIEDILSEKILFGELRPGHIVVVDTEGEGEEKKFTFRGEEKSALPDVPPIEAAGGPGPNLSKDA
>NZ_CP023696.1|WP_031133395.1|3787373_3787982_-|hypothetical-protein
MALPVPAPRAPLDGRRTNRRRRADGSPVARWYAEVLGWAAVDGPPVRLPTGLRFDVLDLPVAAGLAVLRRVRGDWPVAVEGRRMRVLVGAGTADELPGLLDWLEWGGVALDLAAWGAGCRMTAPAPPGWDAAGAPGAPVWLRPPDPGREVEATLAGLTETGATACAGLSGGSGLVRLVAVAAAECHRARLLAAARAGGAALG
>NZ_CP023696.1|WP_031136173.1|3801159_3802281_-|DNA-integrity-scanning-protein-DisA
MAANDRATPGKSGGGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLNVEFTATRLRELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVISVSQSMRLIALYVDGERRVLEESAAILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIAGVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHAELLELPTVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV
>NZ_CP023696.1|WP_031136171.1|3802653_3804057_-|DNA-repair-protein-RadA
MAARTKSTKDRPSYRCTECGWTTAKWLGRCPECQAWGTVEEYGGAPAVRTTAAGPVSTAAVPIAQVDGRRATARSTGVDELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAASGDHPTLYVTGEESASQVRLRADRIGALHDHLYLAAETDLSAVLGHLDAVKPSLLILDSVQTVASPEIDGAPGGMAQVREVAGALIRASKERGMATLLVGHVTKDGAIAGPRLLEHLVDVVLHFEGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRAEPVPGTCLTVTLEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSATVGGVRLSEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAHRLGFTHALVPTDPGKVPAGMRVLEVADVGEALQVLPRTRRGSAPAAAG
>NZ_CP023696.1|WP_107426940.1|3804280_3806338_+|hypothetical-protein
MEHPTNTTGAHRARRRAPRSGPRTVAPPPPARYERHLDGLFTYCLSVLCDHDAAVAVLGEALAVAERQQGRCPADPALARAWLYALARWACLRELARRRRARPGAHARRPALPYGAPAAAHAPEAPADPESGPLGTAPRTAPGAAPYASGATPPGAGTPPRAPGPRRPAPAPSAHRPTAAVDPVPPGGTEPTGPPPTAAGPGTTPGPDRPDRPDRPDRTGTTGIAPSPDRTGTSGTSGIAGSTGTTGTTGTTDRHRDELALLAWPEAAGTTPEQREALELAVRHQLGHAEVAAVLGMAPQAARELLSAAACEVERTRAALSVVENGTCPAVARLTGDHRVLLSAALRRELVRHVDDCPRCRRTAERAEAAGPWPGSTVTPATLPLVPAPRPAARAAMLHAPRTRSAGPRFGRDGFPLDPKDQAARRDRMRARAVTTTVVATVIAAPVLALWAAYRSDTAGDEGRGDQAFSATDETGAPAGDRHYANAGSAQADPGFRTRRQAPDVSVEVVGGGSAPSPALSGRVGPGRVAVTAQPYGTATLLTLTATGGRVDWSLWTDAPWLYASRTSGALEPGASVKVYVSVDRAREPRGPWSARIHVHPSGAVVSLTGYGPDDRPGTSARPRPPSRPAPPPDTPPAPSPTPPPPSSEPPPATQPPPSEPPAPSPTPPPATEPPASEPPAPDGP
>NZ_CP023696.1|WP_031136440.1|3806385_3807171_-|hypothetical-protein
MEVPKAPEDDEKGLDFPRAWVEFPDPADEDQVFRCDLTWLTSRWTCVFGSGCQGIQAGRAADGCCTLGAHFSDEDDEKRVAGHVARLTPQLWQFHDEGVSSGWVQLDEDGERQTRRWEGSCIFQNRPGFAGGAGCALHILALREGREPLETKPDVCWQLPVRRTYDWIERPDDTKVLQVSIGEYDRRGWGPGGHDLHWWCTSATSAHGAGEPVYVTYRPELTELMGEAAYDVLAGLCEARLASALPLVAPHPADPVRADQG
>NZ_CP023696.1|WP_031136442.1|3807436_3808366_+|Ppx/GppA-family-phosphatase
MRLGVLDVGSNTVHLLVMDAHPGACPLPAHSHKVELRLAELLDADGAIGAPGIDRLVAVVRDALHTAEEKGCEAVLPFATSAVRDAANADAVLARVKAETGVTLQVLTGEEEARLTFLAARRWFGWSAGKLLLLDIGGGSLEIAYGIDEEPDTAASLPLGAGRLTAGWLPGDPPDPADVRALRRHVRAEIARTVGEFARFGPPDHVVATSKTFKQLARIAGAPGSGEGLYAQRLLSRASLEAWVPKLAGMTVEQRRELPGVSPSRAAQLLAGALVAEAAMDLLGVGAVEICPWALREGVILRRLDHLPE
>NZ_CP023696.1|WP_031136444.1|3808401_3809232_+|sugar-phosphate-isomerase/epimerase
MAQQADRAGARAPRAKVALSTASVYPESTATAFEVAARLGYDGVEVMVWTDPVSQDLEALRRLSDYHQVPVLAVHAPCLLITQRVWSTDPWVKLQRARTAAEKLGASTVVVHPPFRWQRQYARDFVDGVWRMANETDVRFAVENMYPWRYRDREMLAYAPEWDVTKDDYRHYTVDLSHTATARTDALAMVSRMGDRLGHVHLADGRGSAKDEHLVPGRGTQPCAELLEHLTRTGFDGHVVIEVNTRRAMSAAEREADLAEALAFTRQHLGTSAGVL
>NZ_CP023696.1|WP_031136758.1|3809489_3811343_+|dihydroxy-acid-dehydratase
MPELRSRTVTHGRNMAGARALMRASGVPGEDIGRKPIIAVANSFTEFVPGHTHLQPVGRIVSEAIRAAGAIPREFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVEAHCADALICISNCDKITPGMLMAALRLDIPTVFVSGGPMESGRATLVDGTVRTLDLVDAISDAVNDKISDEDILRIEENACPTCGSCSGMFTANSMNCLTEAIGLSLPGNGSVLATHTARRALYENAARTVVDITKRYYEQDDASVLPRNVATFAAFENAMALDIAMGGSTNTILHLLAAAQEAGVPFGLEEIDAVSRRVPCLAKVAPNVAKDRTYYMEDVHRAGGIPALLGELHRAGLLNEDVHAVHSPSLADWLKSWDVRGGSPSPEAVEMWHAAPGCVRSAEAFSQSERWEALDLDAEGGCIRSAEHAYSKDGGLAVLRGNLAVDGCVVKTAGVDESIWTFEGPAVVCESQEEAVEKILNKRVKDGDVVVIRYEGPKGGPGMQEMLYPTSFLKGRGLGKTCALITDGRFSGGTSGLSIGHASPEAASGGTIALVEDGDRIRIDIPNRTIELLVDDDTLAARRDALAGTYAPKDRTRKVSAALRAYAAMATSADKGAVRDITRLP
>NZ_CP023696.1|WP_150485821.1|3811520_3813989_-|PQQ-binding-like-beta-propeller-repeat-protein
MPPLRSSGPVPEAEHPEYAGRYRLEDWLGSGGMGVVRLARSDSGLRLAVKVIHLEHAADPEFRARFRQEVDAARRVSGAFTAPVVDADPDAARPWMATLFTDGPTLSERVKRNGPLDAAELRRLGAGLAEALRDIHRAGVVHRDLKPSNVLLAADGPKVIDFGISRPSDSDVRTETGRLIGTPPFMAPEQFQRPRDVGPAADVFAMGAMLVHAATGRGPFDSNSPYVVAYQVVHNEPDLAGVPDGLAPLLRRCLAKDPDARPTPEEVMAALRVRGDGGAVGDGGGVGDGGGVGSGAGSGADAGSGADAGSGVAGGAGSGGGAGAEVARVPAQRGAGRGAVVPEQRSAGVGEVVGGGRGVRGVGGSGVGGGAGGGSCGGDGVAGGAEGAVSGGDGRLAGGGGAVGSGAVAGAAGVRRARPRLVWVAAAVAVAGALVGGLIAVRHTGGPSGAADAGAAAAARGFREWAVPLGTGGAAGQPPVCAAAAGALYCSASGVKAARLDAADGTVVWSVPAGPPAAPREGTPRESTPREAAPVVAADGLVRVVSGRAATGGASRLEALDAASGAVRWGADLGAYTGVVHGPDTVLLVRADGRARALDAATGAERWSGRPAARAQWVAGAAAGEPVYAAAVAVDGASTEVSAVDPRDGRVLWRERVPGALTPVQVARGALVLLSADRDLYTDAVVRLDLRDRGVRRVALSGAADQAQAVVDGRTAYVVGSGGALAAVDLGAGAGGGRELWRLETGAARVSRPVVAGGRVFLMAGDGRLLGVDAERGVLAGQSGPRMAGGVVPLLAAPVAAGGKVYGGAPDGTVFGVDPAGW
>NZ_CP023696.1|WP_031137190.1|3814150_3814414_+|peptidase
MSTNSVKRYPVAPGVQLRVRSGPGTQYGVIKTLPTGVRVPINCQSPGTWVTGTYGTSNIWDNIGNGEWVADAYVMTGADGYVTVRCG
>NZ_CP023696.1|WP_031137188.1|3814544_3815060_+|hypothetical-protein
MADGTPPATAPAARPDGPRPEPLRFFGTTWVGHDGGYGLRRAGVAAGSLAAAVAGALVLRFAYEGLAIASVGGFVNGLLVVMFAVCTAIAFQRTWEGFVRRPADPAREEALRSLKAVGFVGSLLAYFVRSLVEAPGEKLARAEYEAARARHEKRRTTRTGNPAARKKRPRR

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Crispr_ID: NZ_CP023696_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_12

4022447-4022620

Orphan

Consensus_repeat	Method
GCGGTGCGGTNGNCGTGCGGTGN	CRT

3 spacers

The CRISPR arrays of NZ_CP023696_12

>merge|NZ_CP023696|12|4022447-4022620|CRT
GCGGTGCGGTTGACCAGCCATGCGCTGCGTACGGGCATGTTGTCCTCCTGTGGGTGCGGTGACGTGCGGTGGGGTGGCGTGCGGTGGGGTGGCGTGCGGTGGGGGCGGCACGCGGTGCGGTGGCGTGCGGTGGCCTCGCGGGGCGGGGCGGTGCGGTGCGGTGGCGTGCGGTGC

>NZ_CP023696|12|1|4022447-4022620|CRT
GCGGTGCGGTTGACCAGCCATG	CGCTGCGTACGGGCATGTTGTCCTCCTG
TGGGTGCGGTGACGTGCGGTGG	GGTGGCGTGCGGTGGGGTGGCGTGCGGTGGGGGCGGCAC
GCGGTGCGGTGGCGTGCGGTGG	CCTCGCGGGGCGGGGCGGT
GCGGTGCGGTGGCGTGCGGTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031132823.1\|4015943_4016177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132295.1\|4017547_4018993_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132266.1\|4030105_4030348_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132282.1\|4022720_4023656_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368574
NZ_CP023696.1\|WP_031132273.1\|4027320_4027707_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378822
NZ_CP023696.1\|WP_037938047.1\|4027699_4028071_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132278.1\|4025060_4026260_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP023696.1\|WP_031132267.1\|4029289_4029697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132265.1\|4030605_4030803_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132826.1\|4011651_4015548_+\|DNA-directed-RNA-polymerase-subunit-beta'	unknown	unknown	gnl\|CDD\|234794
NZ_CP023696.1\|WP_031132279.1\|4023768_4025064_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP023696.1\|WP_023587065.1\|4006533_4007064_+\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NZ_CP023696.1\|WP_031132828.1\|4008069_4011555_+\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|234749
NZ_CP023696.1\|WP_031132824.1\|4015693_4015957_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132297.1\|4016450_4017362_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|376556
NZ_CP023696.1\|WP_031132269.1\|4028521_4029118_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132270.1\|4028136_4028427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132291.1\|4020166_4021273_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132293.1\|4019446_4020163_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031132830.1\|4007175_4007559_+\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031132279.1\|4023768_4025064_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	0.000253989
NZ_CP023696.1\|WP_023587065.1\|4006533_4007064_+\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	2.61116e-70
NZ_CP023696.1\|WP_031132282.1\|4022720_4023656_-\|hypothetical-protein	gnl\|CDD\|368574	pfam05709, Sipho_tail, Phage tail protein. This family consists of several Siphovirus and other phage tail component proteins as well as some bacterial proteins of unknown function.	4.02453e-07
NZ_CP023696.1\|WP_031132273.1\|4027320_4027707_+\|hypothetical-protein	gnl\|CDD\|378822	pfam12158, DUF3592, Protein of unknown function (DUF3592). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 150 and 242 amino acids in length.	0.00156952
NZ_CP023696.1\|WP_031132828.1\|4008069_4011555_+\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NZ_CP023696.1\|WP_031132278.1\|4025060_4026260_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	2.28045e-09
NZ_CP023696.1\|WP_031132297.1\|4016450_4017362_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|376556	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase. This family includes zinc amidases that have N-acetylmuramoyl-L-alanine amidase activity EC:3.5.1.28. This enzyme domain cleaves the amide bond between N-acetylmuramoyl and L-amino acids in bacterial cell walls (preferentially: D-lactyl-L-Ala). The structure is known for the bacteriophage T7 structure and shows that two of the conserved histidines are zinc binding.	1.94194e-17
NZ_CP023696.1\|WP_031132826.1\|4011651_4015548_+\|DNA-directed-RNA-polymerase-subunit-beta'	gnl\|CDD\|234794	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NZ_CP023696.1\|WP_031132830.1\|4007175_4007559_+\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	2.98366e-44

>NZ_CP023696.1|WP_031132291.1|4020166_4021273_-|hypothetical-protein
MSRAVTTPVYRAVFCDLRTDQVLDALPLTEAKFDDFIGKPGSLTATVPLPEPALAARAKEALRPGRTAVWLERDGDVWWGGVLWTCTPAADEQGRMTVQFQAGTFDSYLDHRILSADLLLLQADQFDIARALVAHAQEQEGGDIGISLGAEMSGVHRDFASGYTALTRVRELLDKLAQLADGFEWRVHCYRDGQGRRVKRLQLGHPRIETSQADIVLDHPGSVLSYSLPTDATVQANVWVARGESANTDQTRDSLPVTAVESEPADLAAGWPRLERTSDHTGVTDTATLRSLARAELARQRRPEQIPELTVVLDGRITPALLGARIRLRVTDLWHQDGLDAHYRIVGLAVNPPQRTKPETATLYLEGV
>NZ_CP023696.1|WP_031132293.1|4019446_4020163_-|hypothetical-protein
MAIIPTDLLDRIRALERQVRDLMGSANTTPALNQISDGEVVIGGGGRLRVRTADGEDLIHMGRVQPDRGPDTPQQGLMVRRDDGSMALTVRTTAPDRLETQPVQIFDRRGNVVVADDAAQRGLARPYIPYPLPRPVDTARWEATGNTSWTTLYSGPAISQHPRLYARIAVRGPAGAEVRLLVDGVQVGPAGGPGADLEFRESLAAGFSATVTFEIQARVAAAGDTVRCRPLALYGVQS
>NZ_CP023696.1|WP_031132295.1|4017547_4018993_-|hypothetical-protein
MLPESIPTVRVTARYLTPDGSPMGGSVEFRPPSLLTHAAADVFVGGPTVARLDGEGRIDVVLPATDAPGWNPVDWTYQVTEKLAGLGRTRVYQLALPAAQPAVDLADAAPADPNTPHYVAVPGPPGPAGQMGPAGPAGPVRSVNGFTAPDITLTAQDVSAIAANQAGAAGGVASLGPDGKVPGTQLPDLAGAVSSVNGRTGAVTVTAADLGALTPAAADTRYLGLDAAPVKTVNGRTGAVQLTAADLSAVAEGDAVLVTGDQTVTGAKTFATPPATGADPSAADHLVRRGYVDSVSAAGTWSPAAMGFSCWAFDPAASSGNTVQYCINGWVYLIGVPLHAATTVRNVVFYVAGYAGGTLAAASFAGLYTGSGTKVGQTAALNGLLTATEGKTFVLPLGTPYAAAPGNYWVALLVNGPNPTNGGPGFLRGASMGEAPGGSARMPGAFIRHGRLATTGQTSLPASFTPSTVVADSNAIWAALA
>NZ_CP023696.1|WP_031132297.1|4016450_4017362_-|N-acetylmuramoyl-L-alanine-amidase
MAAPLSPDRLLAALRAEGVRVVERPGWRTHHRNRAGAWGPVNGVMIHHTVTSGTAASVDLCARGYAGLPGPLCHGVIAKDGTVHLVGGGRANHAGGGDPSVLQAVITETYRDRPPLPRAHQGSPGAVDGNARFYGFECVNLGDGSDPWPAAQLDAVERVGAALCRAHGWGARSVIGHLEWSAHKIDPRGFAMAGLRERVQRRLGAAPAPQKPTAPRPATPRHQPFPGAAFFRSHPDSPIITAMGRRLVAEGCGRYRVGPGPRWSEADRRSYAAWQRKLGYTGADADGWPGATSWNVLKVPYTA
>NZ_CP023696.1|WP_031132823.1|4015943_4016177_-|hypothetical-protein
MSEAAKRTARTVLQTAVGIAVVLPAVVDAADLPETLPWVAGALAVAGALTRIMALDTVQRLLPSWLRTAPGGADGRD
>NZ_CP023696.1|WP_031132824.1|4015693_4015957_-|hypothetical-protein
MGETDPHDPLTVAIELERMRGTLEAGLARVDGSLALLVQRSDQTDKQLADMESRLDALERARWPLASIAALTASAGLLLTLWQLAAH
>NZ_CP023696.1|WP_031132826.1|4011651_4015548_+|DNA-directed-RNA-polymerase-subunit-beta'
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMITYVDEERRQRDLPSLEAHVSVERQQIEQRRDADLEARAKKLETDLAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELLYRELRDRFGTYFDGSMGAAALQKRLESFDLDEEAEKLREIIRTGKGQKKTRALKRLKVVSAFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGRTVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQMAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEEREVRGEGRAFNSTAEAIMAFDARELSLQAKVDIRFPIGSVPPRGWTPPVDEEGETGWQQGDSFRLRTTLGRALFNELLPEDYPFVDYTVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWATRSGVTVAISDVVVPEAKKEIVRGYEAQDEKVQKQYERGLITKDERTQELIAIWTKATNEVAEAMNENFPKTNPIFMMVNSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLSVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRGLKLRIGVTEDGVLRKADDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDQLIAAGVEQVKTRSVLTCESAVGTCAYCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEARSPKGMAPIAEASGRVRIEETEKTKKIVITPDDGSDETAYPISKRARVLVGEGDHVQVGQKLTVGTENPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEIIIRQMLRRVTIIESGDAELLPGELVERSRFEQENRRVVQEGGHPASGRPQLMGITKASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEEAKAAMYSAVGYDDIDYSPFGAGSGQAVPLEDYDYGPYNQ
>NZ_CP023696.1|WP_031132828.1|4008069_4011555_+|DNA-directed-RNA-polymerase-subunit-beta
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEAALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSIDKTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILQEFGEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYKVNKKLGADEPLDAGVLTVDDVIATIKYLVKLHAGETETVGENGSTIVVETDDIDHFGNRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRVNAFGFVETPYRKVIDGRVTDEVDYLTADEEDRFVIAQANAGLTEDMRFAENRVLVRRRGGEVDYVAGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLIRSEAPLVGTGMEYRSAVDAGDVVKAEKDGVVQELSADYITVANDDGTYITYRLAKFARSNQGTSVNQKVVVAEGDRVIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAEVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFDREEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDIILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLADDWAQRLQSIGADRVEPRTNVATPVFDGAREDELAGLLEHTLPNRDGDRLMLPSGKARLFDGRSGEPFPDPISVGYMYILKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFRAAEELGIDLSRREPSSVEEV
>NZ_CP023696.1|WP_031132830.1|4007175_4007559_+|50S-ribosomal-protein-L7/L12
MAKLSQEDLLAQFEEMTLIELSEFVKAFEEKFDVTAAAPVAVAAGVPGAPAAEAVEEKDEFDVILTGAGDKKIQVIKVVRELTSLGLKEAKDLVDGTPKPVLEKVNKETADKAAEALKGAGAGVEVK
>NZ_CP023696.1|WP_023587065.1|4006533_4007064_+|50S-ribosomal-protein-L10
MARPDKSAAVAELTDKFRSSNAAVLTEYRGLTVAQLKQLRRSLGENAQYAVVKNTLTKIAANEAGITSLDDQFTGPTAVAFITGDPVESAKGLRDFAKDNPNLIIKGGVLDGKALSADEIKKLADLESREVLLAKLAGAMKGKQSQAAALFQALPSKLVRTVDALRAKQAEQGGAE
>NZ_CP023696.1|WP_031132282.1|4022720_4023656_-|hypothetical-protein
MAETTTAYTNEAAPGSLITRDGQIQWAGLLMGPGTPYQIDRSGITGWDDLPTLDTGDVPRPDRHGAWPGAVWAQPRLVTATVWLVPPTAAEAAGTTAAFRAATGPEGGERWLAVRLHGETLAVRARVSRRVVPQDRAYLRQGTGKASLQWTATDPRRFSTVRREGQALLPVPEPGLEWENEAGSGLEWPVEWGGDAGAGSFTAVNEGGAAAHPVIEFRGPVRRPTLSRLGDGGQLQYDIVLGAGEVLTVDTEAGTVLLNGTASRLYTATSTSMPEQLFRLEPGGTTLAFRSEDLTPDPSASVTVRWRDAHW
>NZ_CP023696.1|WP_031132279.1|4023768_4025064_-|hypothetical-protein
MSAALAAQVNGITPHLRGLSGALSSFRGQVRAATRATAGVRGGLGRGSAALDRVRPSAASAAAQVQQAKARAESADRSLTKAGRTAAATGTRVRRGGGQARGAAAPLRSLASGAGSFGGVAGLLGRATGPLSRVMTVLGIGLGAAAAAMMAANVAMRANPFGFLAGIIVPVVAAIVEYAMHTETGQKIMKQVFGHVLKTFQGIAKFLGPVVTFYGTVVGSYFKAVGVVVTTVATVVGAAVSGDLGKAGGAVSRATRALSDLVRRPWNAFRSALRPVLDWITGKVPAMFTRVRDAISRTLGGMGDFVSTGLQALAGVITGPIKGLIAFANQVIDGLNSLSGEFLGKKFGVDLDRIPQLADGGVVDPGRDGASAVRPLSSLDRLRPAEAGHRAGPADAPRPPHRARLHAYREPEGRSALAIAEDLLFLHRTAA
>NZ_CP023696.1|WP_031132278.1|4025060_4026260_-|hypothetical-protein
MSLVRSLGRASNALKDFQAKSTATDRAMNGLRSGAARGEQGLKNIRTAAQGSARELNQLKSAADKADRSLAKAGRTGMTSGTQIGGFKKGADTASKGMNGLNKSMKGNFIARLMELFMPLIEKVVEMAARSKTMQKVLKVAFDAVKKVVTAVMKAIGPIMKAAGKLIKTVWDGIKKSVTVVVNAVSKVVSSTFNAIKKVITSVMNGVRSVVSGVWNGIKRVILPVVNWIRDVVPRAFTAVKDKLSRAWGGLQDIAARAFGKIKGAVKGPINAVIGLINGAIGKLNGIRVSIPGWVPFVGGKSFGVSLPRIPLLAEGGVVQPRRGGVHAIVAEAGEAEAVLPLSKLDRLLRHTARAARARSVDSGAGAEHGFRIENYYEATSSDLRETASALLFLSKARG
>NZ_CP023696.1|WP_031132273.1|4027320_4027707_+|hypothetical-protein
MILLLCLPLTALVLLSLPAQLRDRRLKRRGIEAEAVCVERIRTSGVTVHYVRCHFRTETGIKIAARINSPRPAPEVGQGFPVVYDPRKPSDAASAQYLAGREARLGYVFQAALAVLVAAAVLLLTVFS
>NZ_CP023696.1|WP_037938047.1|4027699_4028071_-|hypothetical-protein
MDLLDWHRGRLSSRRLAVLVKHMPRDSALLSETDGEAADWSTTDYLLAAVVDHLAAANWMFASVHSDEDADPPERPVPVPRPGDGAAGSVDAPRPTAPAPAGAPDRDRAPDPPSPAELARFFS
>NZ_CP023696.1|WP_031132270.1|4028136_4028427_-|hypothetical-protein
MASFNVNAARAQRLEALGRGWSFELDGDTFELPTELSRTTAKALRRLDDDDVDGLLKLLLGAEQFARFEKHDVTMQDIGAILNAYGKETGLGLGEG
>NZ_CP023696.1|WP_031132269.1|4028521_4029118_-|hypothetical-protein
MAGNSASEIRVAGTGRVLVAPLGAALPTTFSATPSTDWDSSWVDLGYTTTDGVTFSKKDKLDPVETWQSISPARFVYSDRDLTLKFSMLQFNEDTLPFFMGGSKTDIVPGGADNQGVFTFDVPDGPTFDERALGLEFTDGKDVTYRFVIPRGQVTATDDIKLARKAAASLGVTFTALSSGDGEPLATFVMKDPAYATA
>NZ_CP023696.1|WP_031132267.1|4029289_4029697_-|hypothetical-protein
MSSAPSTFPDVEAIVVDLLSDRPELAGAIVDESPPPGFDGTQRAVIVSRRGGAWVDDLHVDRPMIELEVYGPDKTAAHVLANAARAVLLRCAGTVLGTSVITDAAEADGPRWLPDYVYTAANRYLCVIQLSVRTS
>NZ_CP023696.1|WP_031132266.1|4030105_4030348_+|hypothetical-protein
MVAAVLEVAAEAGGTGAYTDETARVLTAVIGKIGARISADAEVHGFAGGWQEAVAHLGRSHPDPDDARVLPIRPDGDDEP
>NZ_CP023696.1|WP_031132265.1|4030605_4030803_-|hypothetical-protein
MTVTADTLISSDLAATEAGVVPATIRKWVQLGHLAPSGRRGRALLYRLEDVFAAERAARRKPPAR

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Crispr_ID: NZ_CP023696_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_13

4294059-4294156

Orphan

Consensus_repeat	Method
CGCCTCAGCGGGGCCCGCCCGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_13

>merge|NZ_CP023696|13|4294059-4294156|CRISPRCasFinder
CGCCTCAGCGGGGCCCGCCCGCGCCGCCGGCCGCCGCCGTGCGTCCCGGCCGGCGGGGCCGCACGCGTCCCGGGCGCCTCAGCGGGGCCCGCCCGCCG

>NZ_CP023696|13|12|4294059-4294156|CRISPRCasFinder
CGCCTCAGCGGGGCCCGCCCGCGC	CGCCGGCCGCCGCCGTGCGTCCCGGCCGGCGGGGCCGCACGCGTCCCGGG
CGCCTCAGCGGGGCCCGCCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031133223.1\|4289595_4290000_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP023696.1\|WP_078915712.1\|4285605_4287225_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226364
NZ_CP023696.1\|WP_031133219.1\|4287221_4288331_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NZ_CP023696.1\|WP_078915711.1\|4283449_4284175_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227028
NZ_CP023696.1\|WP_031135831.1\|4297612_4298770_+\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP023696.1\|WP_085921523.1\|4291909_4292974_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236196
NZ_CP023696.1\|WP_085921521.1\|4291617_4291977_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|379202
NZ_CP023696.1\|WP_031133214.1\|4284246_4285296_+\|BMP-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380577
NZ_CP023696.1\|WP_051839969.1\|4296705_4297479_-\|dienelactone-hydrolase	unknown	unknown	gnl\|CDD\|223477
NZ_CP023696.1\|WP_031133225.1\|4290255_4291533_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP023696.1\|WP_031135842.1\|4303185_4303881_-\|two-component-system-response-regulator-AfsQ1	unknown	unknown	gnl\|CDD\|223816
NZ_CP023696.1\|WP_031133221.1\|4288327_4289599_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NZ_CP023696.1\|WP_031135833.1\|4298904_4299228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031133228.1\|4293053_4293764_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|341130
NZ_CP023696.1\|WP_031135827.1\|4295513_4296476_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176125
NZ_CP023696.1\|WP_031135836.1\|4299654_4300248_-\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP023696.1\|WP_031135834.1\|4299364_4299565_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP023696.1\|WP_085921522.1\|4301530_4303147_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP023696.1\|WP_051839974.1\|4300854_4301421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135844.1\|4304053_4304782_+\|SigE-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|132028

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031133223.1\|4289595_4290000_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	1.5542e-71
NZ_CP023696.1\|WP_078915712.1\|4285605_4287225_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_CP023696.1\|WP_031133219.1\|4287221_4288331_+\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	6.93498e-72
NZ_CP023696.1\|WP_078915711.1\|4283449_4284175_-\|hypothetical-protein	gnl\|CDD\|227028	COG4683, COG4683, Uncharacterized protein conserved in bacteria [Function unknown].	3.14668e-41
NZ_CP023696.1\|WP_031135831.1\|4297612_4298770_+\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	5.58588e-158
NZ_CP023696.1\|WP_085921523.1\|4291909_4292974_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236196	PRK08241, PRK08241, RNA polymerase subunit sigma-70.	2.5696e-169
NZ_CP023696.1\|WP_085921521.1\|4291617_4291977_+\|STAS-domain-containing-protein	gnl\|CDD\|379202	pfam13466, STAS_2, STAS domain. The STAS (after Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of Sulphate transporters and bacterial antisigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.	2.66126e-09
NZ_CP023696.1\|WP_031133214.1\|4284246_4285296_+\|BMP-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380577	cd06354, PBP1_PrnA-like, periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type 1 periplasmic sugar-binding protein-like fold.	2.28701e-94
NZ_CP023696.1\|WP_051839969.1\|4296705_4297479_-\|dienelactone-hydrolase	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	0.00191676
NZ_CP023696.1\|WP_031133225.1\|4290255_4291533_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP023696.1\|WP_031135842.1\|4303185_4303881_-\|two-component-system-response-regulator-AfsQ1	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.55955e-82
NZ_CP023696.1\|WP_031133221.1\|4288327_4289599_+\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	3.11257e-79
NZ_CP023696.1\|WP_031133228.1\|4293053_4293764_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	6.9042e-18
NZ_CP023696.1\|WP_031135827.1\|4295513_4296476_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.7151e-86
NZ_CP023696.1\|WP_031135836.1\|4299654_4300248_-\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	3.76615e-23
NZ_CP023696.1\|WP_031135834.1\|4299364_4299565_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	1.42776e-19
NZ_CP023696.1\|WP_085921522.1\|4301530_4303147_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.42367e-51
NZ_CP023696.1\|WP_031135844.1\|4304053_4304782_+\|SigE-family-RNA-polymerase-sigma-factor	gnl\|CDD\|132028	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family. This group of similar sigma-70 factors includes the sigE factor from Streptomyces coelicolor. The family appears to include a paralagous expansion in the Streptomycetes lineage, while related Actinomycetales have at most two representatives.	3.11069e-63

>NZ_CP023696.1|WP_031133228.1|4293053_4293764_-|L,D-transpeptidase-family-protein
MRVEVGAWRRRTGVALGVAGMAVPLTLGVGAGTAQAAASCTAGTGPYQKQVESFLGRPVDGKQSPADCTAIRSFQRTHGITPAAGYAGPLTWRTMDTILKQRAAGKNPNKAGACPVNKGRIACVDLTRQLSWVQDGRKLVYGPVPVRTGRDGAETRTGAKKVYHRSLKHWSTIYKVWMPYSQFFDGGQAFHATDKSMYNPPGSGGCVNMRSADAKAYWNLLRNGDDVFVYGRKPGT
>NZ_CP023696.1|WP_085921523.1|4291909_4292974_-|sigma-70-family-RNA-polymerase-sigma-factor
MVDATAGSTVGTPVDPTEPAGGRAGPAGPVDGAAGDAALQDRLEEYRTELTGYCYRMLGSAFEAEDAVQDTMVRAWRALDRFEGRSSLRSWLYRIATNVCMDALNAGNRRARPIDLTAATPVAQAQLTARPEVTWLEPVPDGRVLPQPADPAEAALARESVRLAFVAALQHLPARQRAVLILREVLAWRASEVAELLETSVASVNSALQRARATLAARDPQRTDPADPLDEGQRRLLDRYLAAFESYDMAALTALLHEDATLSMPPYDLWLRGHDDIVGWMLGVGSVCRGSRLVPTTANGTPAFAHYHPDPGGGFTPWALMVVETRDGKVSGITSFLDVERWFPLFGLPDRLEG
>NZ_CP023696.1|WP_085921521.1|4291617_4291977_+|STAS-domain-containing-protein
MVCVEDTEPIVLRVGGPVAPADAPRLCAELTALLDGAPPGRPAVVDAAGLVRPGLAAVDALARLRLTAGRLGHPLTVWNAPPDLRALLALTGLADRLLSPPAGPGGRRGGTTAPRPGTT
>NZ_CP023696.1|WP_031133225.1|4290255_4291533_+|thymidine-phosphorylase
MDAISVIRTKRDRGELTPEQIDWVIDAYTRGEVADEQMSSLAMAILLNGMNRAEIARWTAAMIASGERMDFSSLSRPTADKHSTGGVGDKITLPLAPLVAACGAAVPQLSGRGLGHTGGTLDKLESIPGWRALLSNEEMLHVLDTTGAVICAAGDGLAPADKKLYALRDVTGTVEAIPLIASSIMSKKIAEGTGSLVLDVKVGSGAFMKNIDDARELASTMVGLGTDHGVRTVALLTDMATPLGLTAGNALEVRESVEVLAGGGPADVVELTVALAREMLDAAGLKDADPAKALADGSAMDVWRRMIAAQGGDPDAALPVARERHVVTAPESGVLTRLDAYAVGVAAWRLGAGRARKEDPVQAGAGVELHAKPGDTVTAGAPLLTLHTDTPEKFDYALRSLEGAWDIAPAGTAFTPSPIVLDRIA
>NZ_CP023696.1|WP_031133223.1|4289595_4290000_+|cytidine-deaminase
MTGTPEPPYDWEALRAAARDAMSRAYAPYSGYPVGAAATVDDGRTVTGCNVENASYGIGLCAECGLVSQLQATGGGRLTHFVCVDGRGETLVPCGRCRQLLYEFGGGGLLLDTPDGVRTLDEMLPQAFGPAHLS
>NZ_CP023696.1|WP_031133221.1|4288327_4289599_+|ABC-transporter-permease
MSESTSTVTPAATAPRKGGGRRKLSLPVILLIIAAGLALFSLVRIVSGADDLTSVGQVSGALQLAVPIGLAGLGGLWAERAGVVNIGLEGMMILGTWFGAWAGYQWGPWTGVVMGLVGGALGGLLHAVMTVTFNVNHIVSGVAINILALGATQYLSDFTFAEAPGGSSKQSPRIEAIDRITVPGLSDWLADLQAQHWFFVSDLAGVLGGLVTNLSLLTVVALLLVPATWWILWRTGFGLRLRSCGENPVAAESLGVNVYKYKYIAVLVSGALAGLGGAFLAIVSTGIYQEGQTGGRGFIGLAAMIFGNWMPGGLALGAGLFGFTDSLKLRGGAENVHAMLLLLAILLVLAVFWTLYKKKYVAAAVSAVASALLFFWYAMTETLPSQFVDAAPYVTTLLVLALSAQRLRMPKADGMPYKRGQGK
>NZ_CP023696.1|WP_031133219.1|4287221_4288331_+|ABC-transporter-permease
MKKFDKDKVLLGIAGPALALAVAFVLTTLVLLVSGLDPIEPYSLMVQEAEYPDIQVLILNQTGTYYLAALAVAIGFRMNLFNIGVDGQYRLAAMLAAVVGASVELPGPLHVLLIVLVAVFVGAFWAGVAGFLKTTRGVSEVVSTIMLNAIATSLIAWMILPANLGEQVAGSNDLTTGIIPESGWMTGLAVEGGNIYGFTFVAFALGVVYWFVLGRTRFGFDLRATGASESAAQASGVDAKKMVLTAMLISGGVAGLTGLPLLLGQTHTYSLAFPAGVGFTGITIALLGRNHPVGLFFAALLISFLQKSSASLDQYGYPKEITTIMQGLIVIAVVVSYELVRQYGLRRQQRKVGEELAAQARKNKEDVAA
>NZ_CP023696.1|WP_078915712.1|4285605_4287225_+|ABC-transporter-ATP-binding-protein
MPARPPLPSLLSRQGECVINASSPPAVELRGITKRFPGVVANHDIDITIRKGTVHALVGENGAGKSTLMKILYGMQKPDEGTITIDGEQVSFASPADAIATGIGMVHQHFMLADNLTVLENVVLGSEKLYGIGSRARDKIMEISDAYGLNVRPDVLVEHLGVADRQRVEILKVLYRGARTLILDEPTAVLVPQEVDALFDNLRELKAEGLTVIFISHKLGEVLSVADDITVIRRGTTVGTADPKSTTPKQLAELMVGSELPSPETRESTVTDVPMLRVENLRLAQTDPDGVVREVLGGIDFTIHKGEVLGIAGVEGNGQTELIETLIGMRVPDGGVITLDGADISRTPTRKRREGGIGYIPEDRHRHGLLLESPLWENRILGHVTEAPNSRRGILDPKAARADTERIVREYDVRTPGIEVTAASLSGGNQQKLIVGREMSHRPKFLIAAHPTRGVDVGAQAQIWDQIREARREGLAVLLISADLDELIGLSDTLRVMYRGRLVADADPATITPEELGSAMTGAAAGHLEHNHDADGEGR
>NZ_CP023696.1|WP_031133214.1|4284246_4285296_+|BMP-family-ABC-transporter-substrate-binding-protein
MRRITRIATAGIASAALALSVTACGSDKKSDTAGDAKGGKAAIAYDIGGRGDQSFNDAAYAGLAKAEKEFGIKGTEAEPSEGEGDPDKVQRLTSLARAGNNPVIGVGFAYAPAIAEVAPKFPDTTFGLIDDTSKTGKNIANLVFNEEQGSYLAGVAAAKVTKSNTVGFIGGVETPLIKKFEAGFVQGVKDTNKNVNVKVQYLTQPPDFGGFSKPDLGKAAAQGQIDAGADVVYAAAGLAGSGSIEAAAKAKKWAIGVDSDQYKQSGLAAYKEYILTSVTKDVSGAVFNLIKSVQDGKPQSGEVRYGLDANGVGLSTSNPAFTEMTEVIAAVDKAKADIAAGTIKVKTAP
>NZ_CP023696.1|WP_078915711.1|4283449_4284175_-|hypothetical-protein
MSDKALYGSRYRFVANRPPAGPLPAGFPRYGVTPACPADHGLSPRRRPATGAPHEEGGDGIRPRGGGGAPHQSRGARKARGPPAKRHRAPREAYPPIEGSTRITTSRLNACVNFEGTGQWEVVLVAEVSAWLEKLAVIDGRSARQVEDAIDALAEFGPTLGRPLVDRIRGSEQHHMKELRPGSSGRSEVRILFAFDPVRRAVLLLAGDKAGSRQRWYDSNIPLAEKRYGEHLAELDTREYE
>NZ_CP023696.1|WP_031135827.1|4295513_4296476_+|LysR-family-transcriptional-regulator
MLHEYRSQPRLSLNSNEEEMGLLLAPRLAYFAAVARHEHVTRAAHETGVPQSTLSRAVARLEEDLGVTLFARKGRALSLTPAGRTFLLSVERALGEVERAAEAVRADVDPTAGRVAFGFLHTMGSETVPALLRAFRADHPKVRFTLVQNYGEAMIERLRAGELDLCLTSPVPDAPDLVGRRLDEQRLRLVVPDDHRLAGRKRIRLAEASDEVFVTLEPGYGLRRITDDLCAEAGFRPRVAFEGEEAETLRGLVAAGLGVALLPPPAVPRPGVVELTVTAPRAVREIGVAWQAGRPDTPPVAAFKKFLLSRRGRLLGVAEQ
>NZ_CP023696.1|WP_051839969.1|4296705_4297479_-|dienelactone-hydrolase
MAHHALVGPGGGRQPRLGRSLGGSDATAVGGVVLLLPDGAPESARRASPLHRAALLPLARRLVRAGRGDGLAAHVVRYRGRGWNGADALLAQDARWAVAEVVRRHGDVPVCLVGHGMGGRAALRTAGHAAVASVLALAPWLPEDDVAAEPEPVRQLAGRQVMIVHGTTDATAHPDLSYRLAVRAKKANRSTCRFEVHSDGHALRQHHDEVLSLAADFVLGSLFDRPYSRPVTDAFAAPPPLGLRMPLAAGFGRSLRP
>NZ_CP023696.1|WP_031135831.1|4297612_4298770_+|adenosine-deaminase
MTIRYPATPTADQIRRAPKVLLHDHLDGGLRPGTVVDLARARGYEALPETDPERLGRWFREAADSGSLERYLETFAHTCAVMQTRDALFRVAAECAEDLADDGVVYAEVRYAPEQHLEGGLTLDEVVAAVNEGLREGERRARARGRRIRVGALLTAMRHAARSLEIAELANAHRDDGVVGFDIAGAEAGHPPTRHLDAFEYLKRENNHFTIHAGEAFGLPSIWQAIQWCGADRLGHGVRIIDDIRVADDGTVTLGRLAAYVRDKRIPLEMCPSSNLQTGAAASYAEHPIGLLRRLQFRVTVNTDNRLMSGTSMTREFELLTEAFGYTLDDMRWFTVNAMKSAFIPFDERLAMINDVIKPGYAELKSEWLFRQNGSTSASGQREAP
>NZ_CP023696.1|WP_031135833.1|4298904_4299228_+|hypothetical-protein
MKQSAAKSLGVAALGAAFAVSAAGSASALTAVPTGPVLATATQALPVAQTVSTLPGGSGETATIAEGVLDAVTGAAPAVPVNTPLDPVVGLLGGLPVGGALPVAGLG
>NZ_CP023696.1|WP_031135834.1|4299364_4299565_-|PspC-domain-containing-protein
MAALARPRDERMIGGVCAALARRFGTSATTMRVMFVVSCLLPGPQFLLYLALWMLLPAEKPASTAW
>NZ_CP023696.1|WP_031135836.1|4299654_4300248_-|VanZ-family-protein
MAAIRYRVAGLALLFVHLLLVGWLTLRPLDVMWVTAANLEPLAGIKADLALGPAEAARRIGEGLVLLAPLGVLLPLADARLDVARWASLVRTVAAGALVSLGIELLQTAVPGRVVDVDAVLLNTAGVALAHVAVVPAWRARLRRRLDAAPGGGVAGPRAGAGAEPASGRRRRRGGALRREDAPQGATPRIPRVGIAP
>NZ_CP023696.1|WP_051839974.1|4300854_4301421_-|hypothetical-protein
MASAAVLAALTAGCGIRTTSVPVDAGGAPSRVPCSLPEAAPQDAGVPTRVYLVCASGLEPVSRTVRPEGGASGEDARVETAQALLDALRERPSERERQAGFTTYLDEPLKVAAGRAGDPEGSLRLSRQPEDLPPAALAQIVCTYGEWGAASVRGTVPLGGPGDYPVRRYVCDASVKARPESPLPTRAP
>NZ_CP023696.1|WP_085921522.1|4301530_4303147_-|HAMP-domain-containing-histidine-kinase
MRGGRGAPGAGRRWTSLRVRLIVVFGLVALTAAVSASGIAYWLNREAVLTRTQDAALGDFKQEMQNRAAALPLRPTQEELRHTAELMAQGGGGYSVVLLGERDAGKPIVGVSDPDRFTLRDVPASLRAAVDEEQELTAGNRHSYHVFWLRTNLRGTPYLVGGTRVIGGGPTGYMLKSLEPERQDLASLGWSLGVATLLALLGSALLAQVAATTVLKPVHRLGEAARRLGEGKLDTRLRVSGTDELAELARTFNGAAESLQKKVADMSAREESSRRFVADMSHELRTPMTALTAVTEVLEEEQDSLDPMVAPAVTLVISETRRLNTLVENLMEVTRFDAGTAKLVLDDVDVADQVTACIDARAWLDAVELDAERGIVWRLDPRRLDVILANLIGNALKHGGSPVRVSVRTSGDDLIVRVRDHGPGIPEDVLPHVFDRFYKASASRPRSEGSGLGLSIAMENALVHGGDITAANSPDGDGAVFTLRLPRDGSSAAAGDGEGGDGGAGEGGTGRDGRGNGRGNDGSGDDGERDSGERRARG
>NZ_CP023696.1|WP_031135842.1|4303185_4303881_-|two-component-system-response-regulator-AfsQ1
MGQNDAVPFLLLIEDDDAIRTALELSLSRQGHRVATAATGEDGLKLLREQRPDLIVLDVMLPGIDGFEVCRRIRRTDQLPIILLTARSDDIDVVVGLESGADDYVVKPVQGRVLDARIRAVLRRGERETTDSATFGALVIDRSAMTVTKNGEELQLTPTELRLLLELSRRPGQALSRQQLLRLVWEHDYLGDSRLVDACVQRLRAKVEDVPSSPTLIRTVRGVGYRLDAPA
>NZ_CP023696.1|WP_031135844.1|4304053_4304782_+|SigE-family-RNA-polymerase-sigma-factor
MNAVQHSTTSNAVVTRLHDVARSTERSGAEKSGTEGASALGGGRGCGRAAGRPHKAPYMVALPDGRKPGAEAAFTAYVKERRASLYATAYHLTGDRHEAEDLLQSALFSTYRAWDRISDKAAVGGYLRRTMTNLHISAWRRRKLNEYPTEELPETVGDSDAMRGTELRAVLWQALARLPELQRTMLVLRYYEGRTDPEIADILNISVGTVKSSIWRSLRRLREDEVLSFGRDQEESFGQLVA

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Crispr_ID: NZ_CP023696_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_14

4936184-4936246

Orphan

Consensus_repeat	Method
GGGCGTCCTGGCCGTAGCCCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_14

>merge|NZ_CP023696|14|4936184-4936246|CRISPRCasFinder
GCTGCGCCTGGCCGGGGCCCTGGTGCCGGCCGGAAGCCGCCGGGTCCTGGCCGAAGCCGCCGG

>NZ_CP023696|14|13|4936184-4936246|CRISPRCasFinder
GCTGCGCCTGGCCGGGGCCCTGG	TGCCGGCCGGAAGCCG
CCGGGTCCTGGCCGAAGCCGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031136597.1\|4930492_4933927_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|377989
NZ_CP023696.1\|WP_031136599.1\|4929420_4929972_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023696.1\|WP_031136761.1\|4928449_4928647_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP023696.1\|WP_031135815.1\|4945172_4945889_-\|IclR-family-transcriptional-regulator-NdgR	unknown	unknown	gnl\|CDD\|224332
NZ_CP023696.1\|WP_031135822.1\|4948865_4949540_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259858
NZ_CP023696.1\|WP_031136998.1\|4941742_4943227_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP023696.1\|WP_031136763.1\|4926837_4928421_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP023696.1\|WP_031136353.1\|4940357_4940546_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_079140267.1\|4934317_4934908_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023696.1\|WP_069978110.1\|4928858_4929440_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023696.1\|WP_031129867.1\|4950263_4950467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135813.1\|4943686_4944406_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP023696.1\|WP_031136350.1\|4934888_4935299_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023696.1\|WP_031137000.1\|4940961_4941750_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP023696.1\|WP_031136765.1\|4925719_4926328_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP023696.1\|WP_031135819.1\|4947513_4948107_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP023696.1\|WP_031135820.1\|4948494_4948722_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135817.1\|4946076_4947507_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP023696.1\|WP_058942316.1\|4930068_4930482_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP023696.1\|WP_069978114.1\|4935435_4935849_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031136597.1\|4930492_4933927_-\|sensor-histidine-kinase	gnl\|CDD\|377989	pfam08376, NIT, Nitrate and nitrite sensing. The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.	6.2034e-25
NZ_CP023696.1\|WP_031136599.1\|4929420_4929972_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	7.81361e-43
NZ_CP023696.1\|WP_031136761.1\|4928449_4928647_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	1.98166e-06
NZ_CP023696.1\|WP_031135815.1\|4945172_4945889_-\|IclR-family-transcriptional-regulator-NdgR	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.30079e-45
NZ_CP023696.1\|WP_031135822.1\|4948865_4949540_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	8.74709e-23
NZ_CP023696.1\|WP_031136998.1\|4941742_4943227_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP023696.1\|WP_031136763.1\|4926837_4928421_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP023696.1\|WP_031135813.1\|4943686_4944406_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	4.71292e-39
NZ_CP023696.1\|WP_079140267.1\|4934317_4934908_-\|ATP/GTP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.17242e-45
NZ_CP023696.1\|WP_069978110.1\|4928858_4929440_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	9.63784e-46
NZ_CP023696.1\|WP_031136350.1\|4934888_4935299_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	6.50754e-42
NZ_CP023696.1\|WP_031137000.1\|4940961_4941750_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.3395e-99
NZ_CP023696.1\|WP_031136765.1\|4925719_4926328_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	3.52712e-63
NZ_CP023696.1\|WP_031135819.1\|4947513_4948107_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	3.44068e-126
NZ_CP023696.1\|WP_031135817.1\|4946076_4947507_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP023696.1\|WP_058942316.1\|4930068_4930482_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	4.89642e-22
NZ_CP023696.1\|WP_069978114.1\|4935435_4935849_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.81374e-23

>NZ_CP023696.1|WP_069978114.1|4935435_4935849_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGPVNQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGSVLTPDLRAELQGSLLH
>NZ_CP023696.1|WP_031136350.1|4934888_4935299_-|DUF742-domain-containing-protein
MTPPPASHDPYGASYDDAAYGHEGDQPLVRPYAMTGGRTRPRYQLAIEALVSTTADPAHLATLLPEHQRICHLCREVKSVAEVSALLSMPLGVARILVADLAEAGMVAIHQPGNGEAGGTPDVTLLERVLSGLRKL
>NZ_CP023696.1|WP_079140267.1|4934317_4934908_-|ATP/GTP-binding-protein
MDFGSSSGGTATEGRSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKKTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGHQPYTPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMARLK
>NZ_CP023696.1|WP_031136597.1|4930492_4933927_-|sensor-histidine-kinase
MRRSTKSAAEQQARGNFTPPPRTAAPPADGPATPPAGSAGAGAPVGDPNRFSPRNWRVATRLNAILLLPVIIGLVMGGFQVKSSVDTWQEALDAEKTTRIVQAASEYGQALLNERDLTAEPLLTAKSPDDRETGAVTDAYAVTDAAKRKFDEAVRDMPDDGQGLQRRLTLFRKEEPRLQDLRKAAYTKALDPVKTEEGYTAVQHVLMEFSNELGLGTGNVTSFGRTVYAVQLAKAAESLQRSIGMHLLLRPSKDDEVFKAQSKAFNSYAYLEDIAVGEFVSGGTQEDVDRLGEVMTRKAQDGAKEFSSSGVQPPVAETATGEKSVFEGMTREIGAAEDADDIRALVKRKEGGVTPETWMAVSTAKFDGYTEVEKELLTKALNEASRIADEARNDAFVNGGVVVVALLAAFVLAGLMARQMSRSMRRLRHAALGVAEQRLPMLVDQLSRTDPGKVDTRVEPIPIESRDEIGEVARAFDQVHREAVRLAAEQALLRGNVNAIFTNLSRRNQSLIEGQLTLITDLENNEADPDQLENLFKLDHLATRMRRNGENLLILAGEEPGRRWDQPVPLVDVMRAATSEVEQYERIELSGVPEAEIHGQAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRVMVEIHDKGIGLTAEDFADINHKLANPPTVDVAVSQRMGLFVVGRLADRHGIRVQLRPSGEQAGTTSLVMLPDAITHGGGGEPLQEDFTVSQIIPEQQAYEPAPLRTAAELGFDDSRYEQQQDGTALNPVGRSLMREERRAALGAQLQGGPSAEGGEQERYEGGYEAPYEGQDAHAGHDQGGYGQQPGYGDVPPREGHPADGYRDGGHQGGTDGYQDGQYQTGEYQSGEYQTGEYQTGGYPADGYRAEGHGAEGGYGQDTGEYRQDGYADGGVQTAGQYPGPVYPEGGYPDGTAGQPSPDGRFDSGSEQGGWPATATYEGGYDGGYGGESESAPAAPANERDGVGFDRPGSEPDAAHELTEAGLPRRGSQRAAERTNLNGNHRQDTQDRQVQPVRQASASETERTGDWRSANDERWQRAGKLKEPKAGGVTASGLPRRVPKANLVEGTAEQTPQGGPQVSRAPEDVRGRLSNLRRGVQKGRSAGTDMNGSATYDRHSGPGSTYNQER
>NZ_CP023696.1|WP_058942316.1|4930068_4930482_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGLVNQTVVEMERGFLFIMSISDGSSLAVLAHPDADIGLVGYEMALLVDRAGSVLTPDLRAELQGSLLN
>NZ_CP023696.1|WP_031136599.1|4929420_4929972_-|DUF742-domain-containing-protein
MATPPGGHHPYSGAHQVQGGNAQNHYDFPSAPGGQGGYQQPYQQPQAPRSHPARQRYQSPEQAADARAAAHNPLVRPYAMTGGRTRPRYQLAIEALVSTTADPSRLHGQLPEHQRICRLCFEIKSVAEISALLSIPLGVARILVADLAEAGLVAIHQPGGDEAAGGQPDVTLLERVLSGLRKL
>NZ_CP023696.1|WP_069978110.1|4928858_4929440_-|ATP-binding-protein
MDFASSSGGAARSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKTTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGHQPYTPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMARLR
>NZ_CP023696.1|WP_031136761.1|4928449_4928647_+|acyl-CoA-carboxylase-subunit-epsilon
MADPSLLRVEKGHAAPEELAALTAVILARANARPAAVPAQRVRSTAGWRRLERQGGFRAAHSWQR
>NZ_CP023696.1|WP_031136763.1|4926837_4928421_+|acyl-CoA-carboxylase-subunit-beta
MTVVDETQGEPADARGRVAELHALREEARRGPSERATEAQHAKGKLTARERIDLLLDEGSFREVEQLRRHRATGFGLEHKKPYTDGVITGWGTVEGRTVFVYAHDFRIFGGALGEAHATKIHKIMDMAIAAGAPLVSLNDGAGARIQEGVSALAGYGGIFQRNTRASGVIPQISVMLGPCAGGAAYSPALTDFVFMVRDTSQMFITGPDVVKAVTGEEITQNGLGGADVHAETSGVAHFAYDDEETCIAEVRYLLSMLPSNNRENPPVHPAEDPADRRGDVLLDLVPADGNRPYDMHKVIEEIVDDGDFLEVHERWARNIVCALARLDGQVVGIVANQPQTLAGVLDIEASEKAARFVQMCDAFNIPIITFLDVPGFLPGVDQEHGGIIRHGAKLLYAYCNATVPRISLILRKAYGGAYIVMDSQSIGADLTYAWPTNEIAVMGAEGAANVIFRRQIADAEDPEAMRARMVKEYKAELMHPYYAAERGLVDDVIDPAETREVLIRSLAMLRTKHADLPSRKHGNPPQ
>NZ_CP023696.1|WP_031136765.1|4925719_4926328_-|YceI-family-protein
MGLFTRTSGTKPATATAPAADPALAALTGTYTIDTAHSTLGFTARHAMITNVRGAFTDYEGTLTLDGSDPAASAASLDIRMASVDTGSADRDGHLRGADFFDAERFPLMTFRSTSAEALGGSDYRIHGDLTIKGTTRPVAIDLEFNGAAKDPFGNERVGFEGRAEILRSDWGLTWNAALETGGVLVSDKIKLTFEISAIRTA
>NZ_CP023696.1|WP_031136353.1|4940357_4940546_+|hypothetical-protein
MKTTMTIRSTANPRRTTLAHLEDAARLERGALPEQAGPLPAATANPRRTVLMKAPAPAAPAE
>NZ_CP023696.1|WP_031137000.1|4940961_4941750_+|fumarylacetoacetate-hydrolase-family-protein
MRIARFSIDGNVAFGAVEGGSAPGAEGDLVLDIIKGIPYTDFELSGTKVPLSKVRLLPPVLPNKVVAIGRNYAEHAAELGNEVPEVPVAFFKPTTSVIGSGDAIEYPSFSNELHHEAELAVVIGRMCREVPRERVKDVVFGYTCANDVTARDAQRREKQWARAKGFDTSCPLGPWVETDLDPGDLAIQCTVNGEQRQLGRTSDMVRSVEDLVVHISEAMTLLPGDVILTGTPAGVGPLNVGDEVAVTIEGIGTLTNKVIKRG
>NZ_CP023696.1|WP_031136998.1|4941742_4943227_+|glutamate--tRNA-ligase
MVNTPDRPVRVRFCPSPTGNPHVGLVRTALFNWAFARHHGGTMVFRIEDTDAARDSEESYRQLLDAMRWLGLDWDEGPEVGGPHAPYRQSERMDVYRDVADRLLKGGHAYHCYCTAEELDERREAARAAGKPSGYDGHCRELTAERIAGYEAEGRSAIVRFRMPDQPITFRDLVRGELTFTPENVPDYGIVRANGAPLYTLVNPVDDALMEITHVLRGEDLLSSTPRQIALYKALIELGVAKAIPEFGHLPYVMGEGNKKLSKRDPQSSLNLYRERGFLREGLLNYLSLLGWSFSADQDVFTVAQMVEKFDIADVNANPARFDLKKAESINADHIRMLGEAEFAAACEPWLQAPHAPWAPEDFDREAWERIAPHAQTRLTVLSDITANVDFLFLKEPVEDEASWQKAMKGDPAALLTTARARLEAADWSSPESLKDAVLKAGEEHGLKLGKAQAPVRVAVTGRTVGLPLFESLEILGRDRTLARIDAALAKLAG
>NZ_CP023696.1|WP_031135813.1|4943686_4944406_+|HAD-family-hydrolase
MAIRAVLWDIDDTIFDYAAADRAGMRRHLSEEGQYGGFADVEEALLRWREATTLHWARFAAGETTWEEQRRDRVRTFLGVPLGDDEADAWFERYLAHYEAAWALFPDTVPVLDALAARYRHAVLSNSSLLNQDRKLRVLGVRDRFEAVLCAADIGVSKPHAAAFHAACDALALAPGEVAYVGDHPDVDARGAVDAGLHGVWLDRSDLGGHPELTRITDLHQLPALLGGDTRFGAPDTFG
>NZ_CP023696.1|WP_031135815.1|4945172_4945889_-|IclR-family-transcriptional-regulator-NdgR
MDNSSGVGVLDKAALVLSALESGPATLAGLVAATGLARPTAHRLAVALEHHRMVARDMQGRFILGPRLAELAAAAGEDRLLATAGPVLTHLRDVTGESAQLYRRQGDMRICVAAAERLSGLRDTVPVGSTLTMKAGSSAQILMAWEEPERLHRGLQGARFTATALSGVRRRGWAQSIGEREPGVASVSAPVRGPSNRVVAAVSVSGPIERLSRHPGRMHAQAVIDAASRLTEALRRSG
>NZ_CP023696.1|WP_031135817.1|4946076_4947507_+|3-isopropylmalate-dehydratase-large-subunit
MGRTLAEKVWDDHVVRRAEGEPDLLYIDLHLLHEVTSPQAFDGLRKSGRQVRRLDLTIATEDHNTPTLDIDKPIADPVSRAQLETLRRNCAEFGVRLHPLGDVEQGVVHVVGPQLGLTQPGTTVVCGDSHTSTHGAFGALAFGIGTSQVEHVLATQTLPMARPRTMAITVDGELPDGVTAKDLILAIIARIGTGGGQGYVLEYRGSAIEKLSMEARMTICNMSIEAGARAGMIAPDETTFAYLKGRAHAPEGDDWDAAVAYWKTLRTDDDAVFDAEVVIDAAELSPFVTWGTNPGQGAPLSASVPDPASYEDASERLAAEKALEYMGLKPGQPLRDIRVDTVFVGSCTNGRIEDLRNAAALLEGRKVADGVRMLVVPGSVRVALQAVEEGLDKVFKEAGAEWRHAGCSMCLGMNPDQLAPGERSASTSNRNFEGRQGKGGRTHLVSPQVAAATAVLGHLACPADLSDADATTPAGV
>NZ_CP023696.1|WP_031135819.1|4947513_4948107_+|3-isopropylmalate-dehydratase-small-subunit
MEAFTTHTGRAVPLRRSNVDTDQIIPAHWLKKVTRDGFEDGLFEAWRKDPEFVLNRPERQGATVLVAGPDFGTGSSREHAVWALQNYGFKTVISSRFADIFRGNSLKNGLLTVVLDQKTVDALWELTEADPQAEITVDLVARQVRAEGVTADFELDENARWRLLNGLDDISITLRNEADIAAYETERPSYKPRTLPV
>NZ_CP023696.1|WP_031135820.1|4948494_4948722_+|hypothetical-protein
MERDSQLELYEAVATRLKEAHSRVRALQVPEGVRMALSRKLLVVTAAAKHDLADAARRLDRLMKDLDEGRFPEGD
>NZ_CP023696.1|WP_031135822.1|4948865_4949540_+|HU-family-DNA-binding-protein
MNKAQLVEAIADKMGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVERPARYARNPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPKGGEVAVKKAPKGSLTGAPPTIAKAATKKAAAKKAAAKKATPAKKTTTAAAAKKTTAKKTTSAAAKKTTAAAKKAAPAKKTTTAAAAKKTTAKKTTAPAKKATAKKAPAKKTTARKTTAAKKTATPRNK
>NZ_CP023696.1|WP_031129867.1|4950263_4950467_-|hypothetical-protein
MQATAYTYDPETRSGSVLLDDGTPVEFGAEAFDAGGLRLLRAGQRVRIETEDEGGALRITLVTLQTF

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Crispr_ID: NZ_CP023696_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_15

4936421-4936566

Orphan

Consensus_repeat	Method
GGGCGTCCTGGCCGTAGCCCTGG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP023696_15

>merge|NZ_CP023696|15|4936421-4936566|CRISPRCasFinder
GGCGGCCCTGCCCGTAGCCCTGGCCCTGGGCGTCCTGGCCGTAGCCCTGGCCGAAGCCCTGGTCGGGCGACGAGAACTGGGCGGGGGCGTCCTGGCCGTAGCCCCGGCCCGGCGCGTCCTGGCCGTAGCCCTGGGCCTGGCCCTGG

>NZ_CP023696|15|14|4936421-4936566|CRISPRCasFinder
GGCGGCCCTGCCCGTAGCCCTGG	CCCTGGGCGTCCTGGC
CGTAGCCCTGGCCGAAGCCCTGG	TCGGGCGACGAGAACTGGGCGG
GGGCGTCCTGGCCGTAGCCCCGG	CCCGGCGCGTCCTGGC
CGTAGCCCTGGGCCTGGCCCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031136597.1\|4930492_4933927_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|377989
NZ_CP023696.1\|WP_031136599.1\|4929420_4929972_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023696.1\|WP_031136761.1\|4928449_4928647_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP023696.1\|WP_031135815.1\|4945172_4945889_-\|IclR-family-transcriptional-regulator-NdgR	unknown	unknown	gnl\|CDD\|224332
NZ_CP023696.1\|WP_031135822.1\|4948865_4949540_+\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259858
NZ_CP023696.1\|WP_031136998.1\|4941742_4943227_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP023696.1\|WP_031136763.1\|4926837_4928421_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_CP023696.1\|WP_031136353.1\|4940357_4940546_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_079140267.1\|4934317_4934908_-\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023696.1\|WP_069978110.1\|4928858_4929440_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023696.1\|WP_031129867.1\|4950263_4950467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135813.1\|4943686_4944406_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP023696.1\|WP_031136350.1\|4934888_4935299_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023696.1\|WP_031137000.1\|4940961_4941750_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP023696.1\|WP_031136765.1\|4925719_4926328_-\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274
NZ_CP023696.1\|WP_031135819.1\|4947513_4948107_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP023696.1\|WP_031135820.1\|4948494_4948722_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031135817.1\|4946076_4947507_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP023696.1\|WP_058942316.1\|4930068_4930482_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP023696.1\|WP_069978114.1\|4935435_4935849_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031136597.1\|4930492_4933927_-\|sensor-histidine-kinase	gnl\|CDD\|377989	pfam08376, NIT, Nitrate and nitrite sensing. The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.	6.2034e-25
NZ_CP023696.1\|WP_031136599.1\|4929420_4929972_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	7.81361e-43
NZ_CP023696.1\|WP_031136761.1\|4928449_4928647_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	1.98166e-06
NZ_CP023696.1\|WP_031135815.1\|4945172_4945889_-\|IclR-family-transcriptional-regulator-NdgR	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	2.30079e-45
NZ_CP023696.1\|WP_031135822.1\|4948865_4949540_+\|HU-family-DNA-binding-protein	gnl\|CDD\|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	8.74709e-23
NZ_CP023696.1\|WP_031136998.1\|4941742_4943227_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP023696.1\|WP_031136763.1\|4926837_4928421_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_CP023696.1\|WP_031135813.1\|4943686_4944406_+\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	4.71292e-39
NZ_CP023696.1\|WP_079140267.1\|4934317_4934908_-\|ATP/GTP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	2.17242e-45
NZ_CP023696.1\|WP_069978110.1\|4928858_4929440_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	9.63784e-46
NZ_CP023696.1\|WP_031136350.1\|4934888_4935299_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	6.50754e-42
NZ_CP023696.1\|WP_031137000.1\|4940961_4941750_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.3395e-99
NZ_CP023696.1\|WP_031136765.1\|4925719_4926328_-\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	3.52712e-63
NZ_CP023696.1\|WP_031135819.1\|4947513_4948107_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	3.44068e-126
NZ_CP023696.1\|WP_031135817.1\|4946076_4947507_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP023696.1\|WP_058942316.1\|4930068_4930482_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	4.89642e-22
NZ_CP023696.1\|WP_069978114.1\|4935435_4935849_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.81374e-23

>NZ_CP023696.1|WP_069978114.1|4935435_4935849_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGPVNQTVVEMERGFLFLMSVSDGSSLAVLAHPECDIGLVGYEMALLVDRAGSVLTPDLRAELQGSLLH
>NZ_CP023696.1|WP_031136350.1|4934888_4935299_-|DUF742-domain-containing-protein
MTPPPASHDPYGASYDDAAYGHEGDQPLVRPYAMTGGRTRPRYQLAIEALVSTTADPAHLATLLPEHQRICHLCREVKSVAEVSALLSMPLGVARILVADLAEAGMVAIHQPGNGEAGGTPDVTLLERVLSGLRKL
>NZ_CP023696.1|WP_079140267.1|4934317_4934908_-|ATP/GTP-binding-protein
MDFGSSSGGTATEGRSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKKTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGHQPYTPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMARLK
>NZ_CP023696.1|WP_031136597.1|4930492_4933927_-|sensor-histidine-kinase
MRRSTKSAAEQQARGNFTPPPRTAAPPADGPATPPAGSAGAGAPVGDPNRFSPRNWRVATRLNAILLLPVIIGLVMGGFQVKSSVDTWQEALDAEKTTRIVQAASEYGQALLNERDLTAEPLLTAKSPDDRETGAVTDAYAVTDAAKRKFDEAVRDMPDDGQGLQRRLTLFRKEEPRLQDLRKAAYTKALDPVKTEEGYTAVQHVLMEFSNELGLGTGNVTSFGRTVYAVQLAKAAESLQRSIGMHLLLRPSKDDEVFKAQSKAFNSYAYLEDIAVGEFVSGGTQEDVDRLGEVMTRKAQDGAKEFSSSGVQPPVAETATGEKSVFEGMTREIGAAEDADDIRALVKRKEGGVTPETWMAVSTAKFDGYTEVEKELLTKALNEASRIADEARNDAFVNGGVVVVALLAAFVLAGLMARQMSRSMRRLRHAALGVAEQRLPMLVDQLSRTDPGKVDTRVEPIPIESRDEIGEVARAFDQVHREAVRLAAEQALLRGNVNAIFTNLSRRNQSLIEGQLTLITDLENNEADPDQLENLFKLDHLATRMRRNGENLLILAGEEPGRRWDQPVPLVDVMRAATSEVEQYERIELSGVPEAEIHGQAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRVMVEIHDKGIGLTAEDFADINHKLANPPTVDVAVSQRMGLFVVGRLADRHGIRVQLRPSGEQAGTTSLVMLPDAITHGGGGEPLQEDFTVSQIIPEQQAYEPAPLRTAAELGFDDSRYEQQQDGTALNPVGRSLMREERRAALGAQLQGGPSAEGGEQERYEGGYEAPYEGQDAHAGHDQGGYGQQPGYGDVPPREGHPADGYRDGGHQGGTDGYQDGQYQTGEYQSGEYQTGEYQTGGYPADGYRAEGHGAEGGYGQDTGEYRQDGYADGGVQTAGQYPGPVYPEGGYPDGTAGQPSPDGRFDSGSEQGGWPATATYEGGYDGGYGGESESAPAAPANERDGVGFDRPGSEPDAAHELTEAGLPRRGSQRAAERTNLNGNHRQDTQDRQVQPVRQASASETERTGDWRSANDERWQRAGKLKEPKAGGVTASGLPRRVPKANLVEGTAEQTPQGGPQVSRAPEDVRGRLSNLRRGVQKGRSAGTDMNGSATYDRHSGPGSTYNQER
>NZ_CP023696.1|WP_058942316.1|4930068_4930482_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGLVNQTVVEMERGFLFIMSISDGSSLAVLAHPDADIGLVGYEMALLVDRAGSVLTPDLRAELQGSLLN
>NZ_CP023696.1|WP_031136599.1|4929420_4929972_-|DUF742-domain-containing-protein
MATPPGGHHPYSGAHQVQGGNAQNHYDFPSAPGGQGGYQQPYQQPQAPRSHPARQRYQSPEQAADARAAAHNPLVRPYAMTGGRTRPRYQLAIEALVSTTADPSRLHGQLPEHQRICRLCFEIKSVAEISALLSIPLGVARILVADLAEAGLVAIHQPGGDEAAGGQPDVTLLERVLSGLRKL
>NZ_CP023696.1|WP_069978110.1|4928858_4929440_-|ATP-binding-protein
MDFASSSGGAARSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKTTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGHQPYTPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMARLR
>NZ_CP023696.1|WP_031136761.1|4928449_4928647_+|acyl-CoA-carboxylase-subunit-epsilon
MADPSLLRVEKGHAAPEELAALTAVILARANARPAAVPAQRVRSTAGWRRLERQGGFRAAHSWQR
>NZ_CP023696.1|WP_031136763.1|4926837_4928421_+|acyl-CoA-carboxylase-subunit-beta
MTVVDETQGEPADARGRVAELHALREEARRGPSERATEAQHAKGKLTARERIDLLLDEGSFREVEQLRRHRATGFGLEHKKPYTDGVITGWGTVEGRTVFVYAHDFRIFGGALGEAHATKIHKIMDMAIAAGAPLVSLNDGAGARIQEGVSALAGYGGIFQRNTRASGVIPQISVMLGPCAGGAAYSPALTDFVFMVRDTSQMFITGPDVVKAVTGEEITQNGLGGADVHAETSGVAHFAYDDEETCIAEVRYLLSMLPSNNRENPPVHPAEDPADRRGDVLLDLVPADGNRPYDMHKVIEEIVDDGDFLEVHERWARNIVCALARLDGQVVGIVANQPQTLAGVLDIEASEKAARFVQMCDAFNIPIITFLDVPGFLPGVDQEHGGIIRHGAKLLYAYCNATVPRISLILRKAYGGAYIVMDSQSIGADLTYAWPTNEIAVMGAEGAANVIFRRQIADAEDPEAMRARMVKEYKAELMHPYYAAERGLVDDVIDPAETREVLIRSLAMLRTKHADLPSRKHGNPPQ
>NZ_CP023696.1|WP_031136765.1|4925719_4926328_-|YceI-family-protein
MGLFTRTSGTKPATATAPAADPALAALTGTYTIDTAHSTLGFTARHAMITNVRGAFTDYEGTLTLDGSDPAASAASLDIRMASVDTGSADRDGHLRGADFFDAERFPLMTFRSTSAEALGGSDYRIHGDLTIKGTTRPVAIDLEFNGAAKDPFGNERVGFEGRAEILRSDWGLTWNAALETGGVLVSDKIKLTFEISAIRTA
>NZ_CP023696.1|WP_031136353.1|4940357_4940546_+|hypothetical-protein
MKTTMTIRSTANPRRTTLAHLEDAARLERGALPEQAGPLPAATANPRRTVLMKAPAPAAPAE
>NZ_CP023696.1|WP_031137000.1|4940961_4941750_+|fumarylacetoacetate-hydrolase-family-protein
MRIARFSIDGNVAFGAVEGGSAPGAEGDLVLDIIKGIPYTDFELSGTKVPLSKVRLLPPVLPNKVVAIGRNYAEHAAELGNEVPEVPVAFFKPTTSVIGSGDAIEYPSFSNELHHEAELAVVIGRMCREVPRERVKDVVFGYTCANDVTARDAQRREKQWARAKGFDTSCPLGPWVETDLDPGDLAIQCTVNGEQRQLGRTSDMVRSVEDLVVHISEAMTLLPGDVILTGTPAGVGPLNVGDEVAVTIEGIGTLTNKVIKRG
>NZ_CP023696.1|WP_031136998.1|4941742_4943227_+|glutamate--tRNA-ligase
MVNTPDRPVRVRFCPSPTGNPHVGLVRTALFNWAFARHHGGTMVFRIEDTDAARDSEESYRQLLDAMRWLGLDWDEGPEVGGPHAPYRQSERMDVYRDVADRLLKGGHAYHCYCTAEELDERREAARAAGKPSGYDGHCRELTAERIAGYEAEGRSAIVRFRMPDQPITFRDLVRGELTFTPENVPDYGIVRANGAPLYTLVNPVDDALMEITHVLRGEDLLSSTPRQIALYKALIELGVAKAIPEFGHLPYVMGEGNKKLSKRDPQSSLNLYRERGFLREGLLNYLSLLGWSFSADQDVFTVAQMVEKFDIADVNANPARFDLKKAESINADHIRMLGEAEFAAACEPWLQAPHAPWAPEDFDREAWERIAPHAQTRLTVLSDITANVDFLFLKEPVEDEASWQKAMKGDPAALLTTARARLEAADWSSPESLKDAVLKAGEEHGLKLGKAQAPVRVAVTGRTVGLPLFESLEILGRDRTLARIDAALAKLAG
>NZ_CP023696.1|WP_031135813.1|4943686_4944406_+|HAD-family-hydrolase
MAIRAVLWDIDDTIFDYAAADRAGMRRHLSEEGQYGGFADVEEALLRWREATTLHWARFAAGETTWEEQRRDRVRTFLGVPLGDDEADAWFERYLAHYEAAWALFPDTVPVLDALAARYRHAVLSNSSLLNQDRKLRVLGVRDRFEAVLCAADIGVSKPHAAAFHAACDALALAPGEVAYVGDHPDVDARGAVDAGLHGVWLDRSDLGGHPELTRITDLHQLPALLGGDTRFGAPDTFG
>NZ_CP023696.1|WP_031135815.1|4945172_4945889_-|IclR-family-transcriptional-regulator-NdgR
MDNSSGVGVLDKAALVLSALESGPATLAGLVAATGLARPTAHRLAVALEHHRMVARDMQGRFILGPRLAELAAAAGEDRLLATAGPVLTHLRDVTGESAQLYRRQGDMRICVAAAERLSGLRDTVPVGSTLTMKAGSSAQILMAWEEPERLHRGLQGARFTATALSGVRRRGWAQSIGEREPGVASVSAPVRGPSNRVVAAVSVSGPIERLSRHPGRMHAQAVIDAASRLTEALRRSG
>NZ_CP023696.1|WP_031135817.1|4946076_4947507_+|3-isopropylmalate-dehydratase-large-subunit
MGRTLAEKVWDDHVVRRAEGEPDLLYIDLHLLHEVTSPQAFDGLRKSGRQVRRLDLTIATEDHNTPTLDIDKPIADPVSRAQLETLRRNCAEFGVRLHPLGDVEQGVVHVVGPQLGLTQPGTTVVCGDSHTSTHGAFGALAFGIGTSQVEHVLATQTLPMARPRTMAITVDGELPDGVTAKDLILAIIARIGTGGGQGYVLEYRGSAIEKLSMEARMTICNMSIEAGARAGMIAPDETTFAYLKGRAHAPEGDDWDAAVAYWKTLRTDDDAVFDAEVVIDAAELSPFVTWGTNPGQGAPLSASVPDPASYEDASERLAAEKALEYMGLKPGQPLRDIRVDTVFVGSCTNGRIEDLRNAAALLEGRKVADGVRMLVVPGSVRVALQAVEEGLDKVFKEAGAEWRHAGCSMCLGMNPDQLAPGERSASTSNRNFEGRQGKGGRTHLVSPQVAAATAVLGHLACPADLSDADATTPAGV
>NZ_CP023696.1|WP_031135819.1|4947513_4948107_+|3-isopropylmalate-dehydratase-small-subunit
MEAFTTHTGRAVPLRRSNVDTDQIIPAHWLKKVTRDGFEDGLFEAWRKDPEFVLNRPERQGATVLVAGPDFGTGSSREHAVWALQNYGFKTVISSRFADIFRGNSLKNGLLTVVLDQKTVDALWELTEADPQAEITVDLVARQVRAEGVTADFELDENARWRLLNGLDDISITLRNEADIAAYETERPSYKPRTLPV
>NZ_CP023696.1|WP_031135820.1|4948494_4948722_+|hypothetical-protein
MERDSQLELYEAVATRLKEAHSRVRALQVPEGVRMALSRKLLVVTAAAKHDLADAARRLDRLMKDLDEGRFPEGD
>NZ_CP023696.1|WP_031135822.1|4948865_4949540_+|HU-family-DNA-binding-protein
MNKAQLVEAIADKMGGRQQAADAVDAVLDAIVRAVVAGDRVSVTGFGSFEKVERPARYARNPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPKGGEVAVKKAPKGSLTGAPPTIAKAATKKAAAKKAAAKKATPAKKTTTAAAAKKTTAKKTTSAAAKKTTAAAKKAAPAKKTTTAAAAKKTTAKKTTAPAKKATAKKAPAKKTTARKTTAAKKTATPRNK
>NZ_CP023696.1|WP_031129867.1|4950263_4950467_-|hypothetical-protein
MQATAYTYDPETRSGSVLLDDGTPVEFGAEAFDAGGLRLLRAGQRVRIETEDEGGALRITLVTLQTF

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Crispr_ID: NZ_CP023696_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_16

5086536-5086697

Orphan

Consensus_repeat	Method
TCGCCGTGCCGGACTTCGCCGTGCCGG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP023696_16

>merge|NZ_CP023696|16|5086536-5086697|CRISPRCasFinder
ACGCCGTCTCGGGGCGCACCGTGCCGGGGCGTGCGGTGCCGGACTTCGCCGTGCCGGACTTCGCCGTGCCGGGGCGCGGAGGCTCCGGTGCCGCCGGGCCGGGCCCCGACGCGGCGGACCTCGCCGTGCCGGACCTCGCCGTGCCGGACCTCCACGGGGCCG

>NZ_CP023696|16|15|5086536-5086697|CRISPRCasFinder
ACGCCGTCTCGGGGCGCACCGTGCCGG	GGCGTGCGGTGCCGGACT
TCGCCGTGCCGGACTTCGCCGTGCCGG	GGCGCGGAGGCTCCGGTG
CCGCCGGGCCGGGCCCCGACGCGGCGG	ACCTCGCCGTGCCGGACC
TCGCCGTGCCGGACCTCCACGGGGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031133351.1\|5082383_5083313_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NZ_CP023696.1\|WP_150485848.1\|5078370_5081436_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP023696.1\|WP_031129743.1\|5095534_5096722_-\|type-VII-secretion-protein-EccE	unknown	unknown	gnl\|CDD\|274857
NZ_CP023696.1\|WP_031129744.1\|5094818_5095538_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_107067029.1\|5083346_5083634_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839814.1\|5075324_5075960_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236382
NZ_CP023696.1\|WP_031134611.1\|5074911_5075328_-\|DUF4439-domain-containing-protein	unknown	unknown	gnl\|CDD\|373114
NZ_CP023696.1\|WP_031129739.1\|5098626_5099895_+\|type-VII-secretion-associated-serine-protease-mycosin	unknown	unknown	gnl\|CDD\|274856
NZ_CP023696.1\|WP_031134616.1\|5076752_5077754_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_CP023696.1\|WP_031133353.1\|5089218_5090172_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP023696.1\|WP_150485849.1\|5090432_5093867_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223531
NZ_CP023696.1\|WP_078915786.1\|5077938_5078217_+\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
NZ_CP023696.1\|WP_031129741.1\|5097076_5098609_+\|type-VII-secretion-protein-EccB	unknown	unknown	gnl\|CDD\|368288
NZ_CP023696.1\|WP_031133349.1\|5081919_5082384_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP023696.1\|WP_031129733.1\|5103586_5103946_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227179
NZ_CP023696.1\|WP_031133347.1\|5081595_5081892_+\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
NZ_CP023696.1\|WP_031129735.1\|5100520_5102227_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP023696.1\|WP_031129746.1\|5094335_5094569_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP023696.1\|WP_031134614.1\|5076249_5076750_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP023696.1\|WP_031129734.1\|5102254_5103511_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|274856

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031133351.1\|5082383_5083313_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	1.19427e-164
NZ_CP023696.1\|WP_150485848.1\|5078370_5081436_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP023696.1\|WP_031129743.1\|5095534_5096722_-\|type-VII-secretion-protein-EccE	gnl\|CDD\|274857	TIGR03923, T7SS_EccE, type VII secretion protein EccE. This model represents the transmembrane protein EccB of the actinobacterial flavor of type VII secretion systems. Species such as Mycobacterium tuberculosis have several instances of this system per genome, designated EccE1, EccE2, etc. This model represents a conserved core region, and many members have 200 or more additional C-terminal residues. [Protein fate, Protein and peptide secretion and trafficking].	1.4377e-36
NZ_CP023696.1\|WP_031129739.1\|5098626_5099895_+\|type-VII-secretion-associated-serine-protease-mycosin	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	4.63764e-96
NZ_CP023696.1\|WP_078915786.1\|5077938_5078217_+\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	3.10211e-27
NZ_CP023696.1\|WP_031134611.1\|5074911_5075328_-\|DUF4439-domain-containing-protein	gnl\|CDD\|373114	pfam14530, DUF4439, Domain of unknown function (DUF4439). This domain has a ferritin-like fold.	1.4145e-20
NZ_CP023696.1\|WP_031134616.1\|5076752_5077754_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	0
NZ_CP023696.1\|WP_031133353.1\|5089218_5090172_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	3.35312e-149
NZ_CP023696.1\|WP_150485849.1\|5090432_5093867_-\|AAA-family-ATPase	gnl\|CDD\|223531	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].	9.45187e-51
NZ_CP023696.1\|WP_051839814.1\|5075324_5075960_-\|hypothetical-protein	gnl\|CDD\|236382	PRK09111, PRK09111, DNA polymerase III subunits gamma and tau; Validated.	0.000621116
NZ_CP023696.1\|WP_031129741.1\|5097076_5098609_+\|type-VII-secretion-protein-EccB	gnl\|CDD\|368288	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B. EccB is a family of largely Gram-positive bacterial transmembrane componenets of the type VII secretion system characterized in Mycobacterium tuberculosis, systems ESX1-5. Translocation of virulent peptides through the membranes is thought to be mediated via a complex that includes EccB, EccC, EccD, EccE, and MycP. EccB, EccC, EccD, and EccE form a stable complex in the mycobacterial cell envelope.	1.00572e-52
NZ_CP023696.1\|WP_031133349.1\|5081919_5082384_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.21787e-51
NZ_CP023696.1\|WP_031129733.1\|5103586_5103946_+\|hypothetical-protein	gnl\|CDD\|227179	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown].	0.000170785
NZ_CP023696.1\|WP_031133347.1\|5081595_5081892_+\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	1.22697e-35
NZ_CP023696.1\|WP_031129735.1\|5100520_5102227_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	6.17715e-09
NZ_CP023696.1\|WP_031129746.1\|5094335_5094569_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	3.06763e-08
NZ_CP023696.1\|WP_031134614.1\|5076249_5076750_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	1.71846e-47
NZ_CP023696.1\|WP_031129734.1\|5102254_5103511_+\|S8-family-serine-peptidase	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	5.52793e-66

>NZ_CP023696.1|WP_107067029.1|5083346_5083634_+|hypothetical-protein
MTVVRGRRGCSSVGDGRRAPGVGRRASAGVGRRASVGDERRASVGDGGHAAPNGALGAAPPGLCPAACPAPSGRGPAACPAPSGRGPAVRPAATG
>NZ_CP023696.1|WP_031133351.1|5082383_5083313_+|tRNA-pseudouridine(55)-synthase-TruB
MSSTANTPLPAGAGRGPRDGLVIVDKPAGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVEKATKLLGHLALTEKEYLGTIRLGQNTVTDDAEGEITSSTDASRVTREGVDAAVAKLTGDIMQVPSKVSAIKIDGKRSYARVRGGEDFDIPARPVTVSQFTVYDMRDAVAEDGTPVVDLVVSVVCSSGTYIRALARDVGADLGVGGHLTALRRTRVGPYKLDAARTLDQLQEQLTVMPIAEAAAAAFPRWDVDERRAKLLLNGVRIDMPAYGEGPVAVFGPEGRFLALVEERGGRAKSVAVFG
>NZ_CP023696.1|WP_031133349.1|5081919_5082384_+|30S-ribosome-binding-factor-RbfA
MADNARARKLADRIQVVVAETLDRRIKDPRLGFVTITDARVTGDLREATVFYTVYGDEEERAASAAALESAKGILRSEVGKQTGVRFTPTLTFVPDALPDNARTIEDLLDKARAKDAEVRQVSTGKTYAGEADPYRKPGDEDDAEADDEDGAGA
>NZ_CP023696.1|WP_031133347.1|5081595_5081892_+|DUF503-domain-containing-protein
MYVGTLSFDLLLGDVRSLKEKRSVVRPIVAELQRKFAVSVAETGNQNLHRRAEIGVAMVSGDVGHLTGVLDRCERLVAARPEVELLSVRRRLHTDDEE
>NZ_CP023696.1|WP_150485848.1|5078370_5081436_+|translation-initiation-factor-IF-2
MAKVRVYELAKEFGVESKVVMAKLQELGEFVRSASSTIEAPVVRKLTDALQGPGSAGKSAAKPGAPRKAAPAAPAARREGSPVPAKPAAPTPAQAGGTPRAAAPKPGAPAPRPAAAEKPAAPAPGPRPTPGPKPAPAKPAPAAPAPTRPEFTAPPSAPAAGPRSGATPGPRPAARPQTPGGQQGGGRQGAPRPGQQAPRPGGARPAGPRPGNNPFTSGGSTGMARPQAPRPGGAPRPGAPGAPGGPRPQAPGQAGGPRPQAGPGGPRPTPGSMPRPQAPRPGGGPAGNRPNPGMMPQRPAAGPRPGPGGRGPATGGRPGGPGGRPGGGGFAGRPGGGGGFAGRPGGGGGGAGRPGAPGGGGFGGRPGFGGRPGGPGGRGGTQGAFGRPGGPARRGRKSKRQRRQEYEAMQAPSVGGVMLPRGNGETVRLSRGASLTDFAEKINANPASLVAVMMNLGEMVTATQSVSDETLQLLGDEMNYTVQIVSPEEEDRELLESFDLEWGENEGGEEYLAPRPPVVTVMGHVDHGKTRLLDAIRKTNVVAGEAGGITQHIGAYQVATEVNDEERRITFIDTPGHEAFTAMRARGAKSTDIAILVVAANDGVMPQTIEALNHAKAADVPIVVAVNKIDVEGADPVKVRGQLTEYGLVAEEYGGDTMFVDISAKQGLHIDSLLEAVILTADASLDLRANPEQDAQGIAIESHLDRGRGAVATVLVQRGTLRVGDTMVVGDAYGRVRAMLDDKGNNVEEAGPSTPVLVLGLTNVPGAGDNFLVVDEDRTARQIAEKRAARERNAAFAKRVRRVSLEDLDKVLKAGQIQELNLIIKGDASGSVEALESSLLQLDVGEEVDIRVLHRGVGAVTESDIDLAMGSDAIVIGFNVRAAGRAAQMAEREGVDVRYYSVIYQAIEEIEAALKGMLKPEYEEVELGTAEIREVFRSSKLGNIAGVLIRSGVVKRNTKARLLRDGKVVAESLNIEGLRRFKDDVTEIREGFEGGINLGNFNDIKVDDVIATYEMREKPRG
>NZ_CP023696.1|WP_078915786.1|5077938_5078217_+|YlxR-family-protein
MSGRTHALTCPERTCVGCRERAAKTDLLRIVAIEGECAPDPRGTLPGRGAYVHPDPSCLDLAVRRRAFPRSLRVQGPLDTADVRRHIEQAAP
>NZ_CP023696.1|WP_031134616.1|5076752_5077754_+|transcription-termination/antitermination-protein-NusA
MDIDVKLLKGLAQEKEIPFELLVEAIESALLIAYHRTEGARRHARAVLDRQTGHVTVWAKEDPADLEEGQEPKEFDDTPSDFGRIAATTARQVIQQRLRDAENDMTFGEYARREGDIVAGVVQQGKDPKNVLVKLDDKLEAILPVQEQVPGEEYPHGLRLRTYVVRVAKGVRGPSVTLSRTHPNLVRKLFALEVPEIADGSVEIAAIAREAGHRTKIAVRSTRSGLNAKGACIGPMGGRVRNVMAELHGEKIDIVDWSDDPADMVANALSPARVSKVEIVDLAARSARVTVPDYQLSLAIGKEGQNARLAARLTGWRIDIRPDTEQTAPPAGE
>NZ_CP023696.1|WP_031134614.1|5076249_5076750_+|ribosome-maturation-factor-RimP
MSTTQSERLRGLLEPLVTDRQLDLEEIEVSRAGRRTVLRVVIDSDDGVELDAVADVSRAISQKLDETDAMGEGEYLLEVSSPGADRPLTEHRHFVRATGRLVRFRLHEGGELVARVLGVDGEGLDVEVPGVKGRKATTRRVEFPEIAKARVEIEFNRKDKKEEEEA
>NZ_CP023696.1|WP_051839814.1|5075324_5075960_-|hypothetical-protein
MPGVLAGCTGPGTGGGGAARPSAAEAARRAELALLRRSAAVSGVLLAGYDEALAAHPAALGTRLAPLREAAARHVAALTPPGERAPATASTGARTGSPDPGAGSRAPGTGSPDGRTAGPDAGAGPPGAGTASGAGAAGVAASGASAGGAFPRGVPAEPGAALAELAALASRTAAAHTAALVGAPPESARLLASVAAAGAAQAYLLGEGGRG
>NZ_CP023696.1|WP_031134611.1|5074911_5075328_-|DUF4439-domain-containing-protein
MSALEAVQAVLAAEHAAVYGYGVVGARVGAARREEAAAGLAAHRALRDAAARAVRDLGGEPGVSAPAYALPFPVADADAAVRLAAVLEDRVAGAYADLVRAASGAARRDAAAALREAAVRAVRWRGGGVAFPGLAERP
>NZ_CP023696.1|WP_031133353.1|5089218_5090172_+|bifunctional-riboflavin-kinase/FAD-synthetase
MQRWRGLEEIPQDWGRSVVTIGSYDGVHRGHQLIIGRAVERARELGVPAVVVTFDPHPSEVVRPGSHPPLLAPHHRRAELMGELGVDAVLVLPFTAGFSQLSPADFIVKVLVDKLRARVVVEGPNFRFGHRAAGNVDYLAELGTTYDYEVEVVDLYVTGEAGGGQPFSSTLTRRLVAEGDVEGAAEILGRPHRVEGVVVRGAQRGRELGYPTANVETLPHTAIPADGVYAGWLTADGERMPAAISVGTNPQFDGTERTVEAYAIDRVGLDLYGLHVAVDFLAYVRGQRKFDSIEALLEAMADDVKRCRALTAEYDGR
>NZ_CP023696.1|WP_150485849.1|5090432_5093867_-|AAA-family-ATPase
MNGDRDEIHRGWNAPPVDDPSDMDAAEMTGEFTIDYTPPAWYTQNAGGGDAPAAPGATPPPPPPTGQPLPVPGLPQGGGFQPHAAPPAPVSAAPAAPPAPPAGPPAVPMAPPEAVPQGAAAGEPGGAPGGAPGGAPGEVPGAPAGAPYAGAEPSAYAPPAAAQPGAPATAPFGGGDVESGATMRFSPAALKQEMEEIARRAEAEAAASAEARPAPAAGAYDASGAGAQGEEGGTGTLSGDGERSDGVDGPDSRIEAPSPDAPGPAEGSLGEGPVGEAPAGADDRGGEVAEGQESPEGRGLRDGQDDREGLDGQDGQGLQGVHAADGGAGHAEPSGGQPAPEEAAGAPTVPGGAGAQPWGPQEAQDSGPVPGLPPLPPEFQPAAPATAQQWPGAAPPTDPSAAPAPAWPGAAPVPGAQPAGYGFPHPQAQPPAPNAQGGHTLPQAPDQNAHTPPPQGGYGFPHPHAQPPAPDTQGGHTLPQAPDQNAHTPPPQGGYGFPHPHAQPPAPDTQGGHALPQAPDPQTPYGHGQAPYAPAPGQHPPAQAPYGAPGGQAHPGQPPHPAAPAHPAAPGRPQPTPQGGYGFPHPGGPQDQQPPAHQHGPHPHAQPPAPAPAPAPAPQYGQAHPQGAQAAPADPRTGAGWPSAVTHDQRQPSVPGAPLGYTAAVELSSDRLLRNTRQKPKSSRNPAAASRFKLGGKKEEAERQRKLQLIRTPVLSCYRIAVISLKGGVGKTTTTTALGATLASERQDKILAIDANPDAGTLGRRVRRETGATIRDLVQAIPYLNSYMDIRRFTSQAPSGLEIIANDVDPAVSTTFNDADYRRAIDVLGRQYPVILTDSGTGLLYSAMRGVLDLADQLIIISTPSVDGASSASTTLDWLSAHGYADLVQRSITVISGVRETGKMIKVEDIVQHFETRCRGVVVVPFDEHLAAGAEVDLDMMRPKTREAYFNLAAMVAEDFTRAQQAQGLWTGDGHGAMPPQMAPPLPGQPAQGQPAPGQPMPGQPMPGQPMPGQPMPGGQPAPGQPAPGQPYPGQGQPAPGGPYGGQPPYGAQPPVPGQAAPGQPGQPYGQPPQAPGAYGQPGVPPQGWAGQPPQPGAPQAPHQGAPQQHPGSGPAQGTDPSAPAAAPAWPQQPQQAPQAPPQQ
>NZ_CP023696.1|WP_031129746.1|5094335_5094569_-|DUF397-domain-containing-protein
MGSAQEKDELYALDISGVEWHGAPGTSPDEERVEIAYLPGGAVAMRSSLDPETVLRYTEAEWRAFVLGARDGEFDLK
>NZ_CP023696.1|WP_031129744.1|5094818_5095538_-|hypothetical-protein
MRLRTRSARAPRGLFGPRHAGHSVAVEGMGALSLPVGDDGVVIGDDAEGNPRIVGFHRSAPYDVLLIGGLWTAQVLALRAAGTGARVAVETGRAQAWTALAHAAGAGLECVTLHDVGRVPPMGATVGSPVVVVRDCGMRPPRGRVVSSPWQSVLTLLPYLSPVAPRLMRAATLVGVQRVSPQEAERIGRILGLSRAEYEALPTLADGVTLWCAGRERHWVMTSGTDAETGLLGTARRMD
>NZ_CP023696.1|WP_031129743.1|5095534_5096722_-|type-VII-secretion-protein-EccE
MGPFQLRQLVLVELALALAAVGLALRGLWLVPTLTVAVVLLLLAVVRRRGQAVPDWSSTALALRGRRRAAAPAAVDVDPSLAPIAEGLPGFRPFPYVDRKRRTVGMLGDGTFLTAVVRVEAGGAAPRPAFGARSLPLSLLGGALEVDDIVLESVQLVQQVRSAPAPHLPQQAVARLSYAPLQERTGAPALRMTWVALKLDPERCREAIEARGGGVEGAQRCLVRAADHVASRITGAGFEAVVLDQEELNSTMATAACASPRLAARAHRPDATPQRRTVETARVWRCDDRWHTTYAVGRWPALAGGEGSPLAKLVSLLTATPAYATTFSLAMRRGSRQGAVDVAGYVRITGGSDTELIGVRRALEQAARSAKVGLVRLDREQLPGVLATLPLGGTQ
>NZ_CP023696.1|WP_031129741.1|5097076_5098609_+|type-VII-secretion-protein-EccB
MASRRDELNAYTFAKRRLVAQFVQPNSTGSEESAPRPLRAVLPGVIVGVVVLAVFGAWGMFRPVAPKDWDSPGENVIIASKSTTRYVVLKTGKTKQLHPVLNMASAKLLLNPDKGTVIKVDESVLDNGKIRHGATLGIPYAPDRLPDAKEAGAAKRWAVCERPVEGGRAIQKAAFVFADREKNRTEGSGRLDGGDLLYVEGPAPERTRYIVDRAGTAYPVKKDELLLRQLVGQGRTPQRVSAGWLETLHKGDEIDFPSVEGRPGDEANVPGELADDVNKVGMVLTAPDGTRMQSYVVLPGRVAPVSDFTAKLLLSSRELIDLGQDGKATPVHAGTFRPSEAFGADLKWPKDAPKPVNSAGTGEGSPNTVCNVLREVDQDSGSTTLSTWVGDDFPAPLPTGSSSAYVTPGTGLLFRQFTGSRTDAGFQFLVTDTGLRYAMQSNGDNAADDSGIGTSGSAEERKARLLEAQQAQNRLGYKDVDPQPVPAAWSAFLPTGPRLSTAAARQPQGS
>NZ_CP023696.1|WP_031129739.1|5098626_5099895_+|type-VII-secretion-associated-serine-protease-mycosin
MSTNSPGTGSGRDRRRAAALAAAAFLGVTLPAPPAAADTPGQCTYPAKPYEGRPWALQRVLLDEVWKQSTGKGVRVAVIDTGVDIAHPQLKPAVDVGSGINLIPKDAEDENGNKVERGKEDGTTDTVGHGTKVAGIIAARPMKGTGFVGLAPDATIIPIQQNDADGNGTAGTLATAIQHAIDEEADVINISQDTANAIEPTPLLKEAVQKALDKEIVVIASAGNDGLDGNVKKTYPASYEGVLAVAASDRNNERAAFSQSGDFVGVAAPGVDMITTVPGGGHCADNGTSFSAPYVAGVAALIKAKHKDWTQRQIVAQIQQTAERSVAGHDRLVGWGVVDPVRALTEDEKPIEAPVAHEGVTKAEPPTPAELHLGETPEQRNARLATYVVVGGGVLVAAIAGTAVALRDARRRNRTTARPAGG
>NZ_CP023696.1|WP_031129735.1|5100520_5102227_+|hypothetical-protein
MGTEEKNLTPQQQQSQDAASIQSTFTATDRMERISAQFARIGFGPGSGPGGFFGKTNFENAPLNAMLDLLEAANPSDLEAAGTALESARKALNDAARDLKKDAAAVDLKGEAGTEFQRFASDLAAYTYNLASFANIVGAQMKVASTGLASVRNARPPRDNRPDPKKPTDFPPSERTADNEDYQKALKAERDRQEAINQLNRLASFYAVSESTLASQEPPKFPERLKAAVPPPTRSFDGGEMRSGAGTATLGSARAEGPQGAYQRLPEGSAPTGGAHTSALGVTPPASPPTLDPSMQIDTIAPPAPPVTAPATPPPTPTAPATSGNPFTPPPMTPGLPATGKGPSTGRNQGGPAVPRTAGPQSTSQVGRPGVPGSPKVTQGGPGQPGRPAGPGQSNVVGRPGTPGAPGAPAAGRQSTVGGPAANNMVGRPGTPGTPATGRAGGPGTPAAGRAGTGIVGGTPQPRSAPGGAGGSRIPTGTVIGGQGAPQGRPSAARPGTGSVIGAHPGAAARSAGRGTPSVNGVVGTPRSQRGKGQKNEEQPGSERPDYLVEDEETWTSRRRGAVPPVID
>NZ_CP023696.1|WP_031129734.1|5102254_5103511_+|S8-family-serine-peptidase
MTAGTTRRLRRRVTCAVALVGAWAIGFVGLAPAAAAEDIRAKQWYLDAMHVDKIWQKTRGEGIKVAVIDSGVNPSTPSLKGQVLKGLDATEVDGKTDDYSGHGTTMAELIAGTGKGGGLQGLAPGAKIIPYRIAADDVKRRKNNWDAEDAIRAAADSDAKIINMSFGGIGKTDRMMEAAKYAQSKGKLMFASVGNTGNKENTRQYPGALPEVVGVAGTDPEGRVGKYSTHGDMVDIAAPGSGIPQWCDATFTRYCDVDGTSAATAIASATAALIWSYHPDWTANQVLRVMLESAGKGEGWKPGTTSNYVGHGVVRPGAHINRGLGKPGDPNVDPLTNENSAAPGGGSSATPAAPATPGTSAPASSQAPQDQATPAQAVTGSSGETGGGSSLGLVLGGAAVVVVVAGGAFYFARKRRTA
>NZ_CP023696.1|WP_031129733.1|5103586_5103946_+|hypothetical-protein
MAVQKVNGVALTKLQGELTRQFDDVKSQLSALQGTIDSLEGRWAGIGAGAFNVKQDAINRNMVGIGKLLLKFQEAIEAARTIAGNTDTEVEAALRGVDVVDGYSGDAATEARTSNLAKY

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Crispr_ID: NZ_CP023696_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_17

5478980-5479205

Orphan

Consensus_repeat	Method
CCCGCGCCCGTATCCGTACCCGCGCCCG	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP023696_17

>merge|NZ_CP023696|17|5478980-5479205|CRISPRCasFinder
CCCGAGCCCGGCGCCCACCCCGAGCCCGGCCGCCGTCCTGAGCCCGGCGCCCGGCCTGGACCCGTGCCCGGGTCCGTACCCGCGCCCGTATCCGTACCCGCGCCCGTATCCGTACCCGCGCCCGTATCCGTACCCGTGCCTGGGTCCGTACCCGTGCCCGCGCCCGTATCCGTGCCCGCGCCCGGGTCCGTGCCCGCGCCCGGGTCCGCACCCGCACCCGCACCCG

>NZ_CP023696|17|16|5478980-5479205|CRISPRCasFinder
CCCGAGCCCGGCGCCCACCCCGAGCCCG	GCCGCCGTCCTGAGCCCGGC
GCCCGGCCTGGACCCGTGCCCGGGTCCG	TACCCGCGCCCGTATCCGTA
CCCGCGCCCGTATCCGTACCCGCGCCCG	TATCCGTACCCGTGCCTGGGTCCGTA
CCCGTGCCCGCGCCCGTATCCGTGCCCG	CGCCCGGGTCCGTGCCCGCG
CCCGGGTCCGCACCCGCACCCGCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_140160808.1\|5482549_5483464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_078915397.1\|5485547_5486792_+\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100085
NZ_CP023696.1\|WP_051839082.1\|5476884_5478888_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP023696.1\|WP_031129426.1\|5475410_5475815_+\|DUF302-domain-containing-protein	unknown	unknown	gnl\|CDD\|269820
NZ_CP023696.1\|WP_031129434.1\|5469506_5470895_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP023696.1\|WP_031129427.1\|5473852_5475031_+\|lipase	unknown	unknown	gnl\|CDD\|238881
NZ_CP023696.1\|WP_031129433.1\|5471018_5471612_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP023696.1\|WP_031129411.1\|5489095_5490262_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP023696.1\|WP_031129412.1\|5488835_5489006_+\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
NZ_CP023696.1\|WP_031129421.1\|5482124_5482544_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839079.1\|5479857_5480967_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
NZ_CP023696.1\|WP_031129435.1\|5468627_5469146_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031129422.1\|5481812_5482040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031129430.1\|5472221_5472962_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP023696.1\|WP_085921326.1\|5475858_5476569_-\|PE-PPE-domain-containing-protein	unknown	unknown	gnl\|CDD\|369775
NZ_CP023696.1\|WP_031129414.1\|5487289_5488585_-\|phytase	unknown	unknown	gnl\|CDD\|226698
NZ_CP023696.1\|WP_051839076.1\|5484017_5485541_+\|ATP-binding-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031129429.1\|5473241_5473811_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379115
NZ_CP023696.1\|WP_031129415.1\|5486892_5487228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031129432.1\|5471914_5472181_+\|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197385

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_051839082.1\|5476884_5478888_-\|hypothetical-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	1.7189e-06
NZ_CP023696.1\|WP_031129426.1\|5475410_5475815_+\|DUF302-domain-containing-protein	gnl\|CDD\|269820	cd14797, DUF302, Uncharacterized domain family DUF302. These domains are mostly found in bacterial single-domain proteins and have been shown to form homodimers; they may also bind zinc. Also characterized as COG3439.	1.90654e-40
NZ_CP023696.1\|WP_031129434.1\|5469506_5470895_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	3.0426e-72
NZ_CP023696.1\|WP_031129427.1\|5473852_5475031_+\|lipase	gnl\|CDD\|238881	cd01844, SGNH_hydrolase_like_6, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	8.61751e-56
NZ_CP023696.1\|WP_031129433.1\|5471018_5471612_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	4.7744e-27
NZ_CP023696.1\|WP_031129412.1\|5488835_5489006_+\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	1.29905e-12
NZ_CP023696.1\|WP_051839079.1\|5479857_5480967_+\|transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	4.25121e-27
NZ_CP023696.1\|WP_031129432.1\|5471914_5472181_+\|metal-sensitive-transcriptional-regulator	gnl\|CDD\|197385	cd10148, CsoR-like_DUF156, Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156. This superfamily includes various transcriptional regulators that respond to stressors including Cu(I), Ni(I), sulfite, and formaldehyde. It includes CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), Bacillus subtilis (BsCsoR), Thermus thermophilus (TthCsoR), and Staphylococcus aureus (SaCsoR), Mycobacterium tuberculosis RicR (regulated in copper repressor, MtRicR), Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), Alcaligenes xylosoxidans NreA (nickel-sensitive), E. coli FrmR (formally known as YaiN, formaldehyde sensitive), and Staphylococcus aureus CstR (CsoR-like sulfur transferase repressor, NWMN_0026.5, SaCstR). CsoR is Cu(I)-inducible, and regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). CsoRs form a homotetramer (dimer of dimers). In the case of MtCsoR, two Cys residues on opposite subunits within each dimer, along with a His residue, bind the Cu(I) ion. These residues are conserved in the majority of members of this superfamily. Exceptions include the functionally uncharacterized Bacillus subtilis YrkD where there is an Asn instead of His (C-N-C), E.coli RcnR where there is a Thr instead of the second Cys (C-H-T), or TthCsoR and E.coli FrmR where there is a His instead of the second Cys and which have an additional N-terminal His (not found in those family members having C-H-C) that may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding. SaCstR regulates genes predicted to function in sulfur metabolism; it is thought that oxidation of the intersubunit Cys pair to a mixture of disulphide and trisulphide linkages by sulfite, results in a reduced affinity of SaCstR for the operator DNA. SaCstR exists as a mixture of oligomeric states, including dimers, tetramers and octamers. The sequence of SaCstR was not available at the time this hierarchy was curated and therefore was not included. Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA. The gene encoding Alcaligenes xylosoxidans NreA is part of the nre nickel resistance locus located on the pTOM9 plasmid from thisbacteria. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon.	2.4964e-24
NZ_CP023696.1\|WP_031129411.1\|5489095_5490262_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.40892e-116
NZ_CP023696.1\|WP_078915397.1\|5485547_5486792_+\|site-2-protease-family-protein	gnl\|CDD\|100085	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation. In this subgroup, SpoIVFB (sporulation protein, stage IV cell wall formation, F locus, promoter-distal B) contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domain. SpoIVFB is one of 4 proteins involved in endospore formation; the others are SpoIVFA (sporulation protein, stage IV cell wall formation, F locus, promoter-proximal A), BofA (bypass-of-forespore A), and SpoIVB (sporulation protein, stage IV cell wall formation, B locus). SpoIVFB is negatively regulated by SpoIVFA and BofA and activated by SpoIVB. It is thought that SpoIVFB, SpoIVFA, and BofA are located in the mother-cell membrane that surrounds the forespore and that SpoIVB is secreted from the forespore into the space between the two where it activates SpoIVFB. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.	6.61689e-76
NZ_CP023696.1\|WP_085921326.1\|5475858_5476569_-\|PE-PPE-domain-containing-protein	gnl\|CDD\|369775	pfam08237, PE-PPE, PE-PPE domain. This domain is found C terminal to the PE (pfam00934) and PPE (pfam00823) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands.	9.74663e-13
NZ_CP023696.1\|WP_031129414.1\|5487289_5488585_-\|phytase	gnl\|CDD\|226698	COG4247, Phy, 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism].	4.73406e-74
NZ_CP023696.1\|WP_031129429.1\|5473241_5473811_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379115	pfam13305, WHG, WHG domain. This presumed domain is around 80 amino acids in length. It is found to the C-terminus of a DNA-binding helix-turn-helix domain. This domain may be involved in binding to an as yet unknown ligand that allows a transcriptional regulation response to that molecule. The domain is named WHG after three conserved residues near the C-terminus of the domain.	2.87176e-15
NZ_CP023696.1\|WP_031129430.1\|5472221_5472962_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.35645e-37

>NZ_CP023696.1|WP_051839082.1|5476884_5478888_-|hypothetical-protein
MAPGGPDALSGAAEQLAKAVAARWQREEEHRRVQDPYPLPVRWRPATARLTDHWANIRRLPPGAVGEPLDLSGRLEGIADTYRAVPSGRLVVLGRSGSGKSILALRFVLDHLRSRTPEEPVPVIFSIGAWDPTALTLRDWLAERLTRDHPGTAARGPGGSTLAAALVDSGRVLPVLDGFDEMAGGLRRPALEALNATILPLLLTSRPGEYADAVDETDVLSAAAPIELTDLTLEDLADYLPRTTRKTARADPAAGAWDPVLREMREPSPDGRAAPLAAVLRTPLMVALARTLYSDTPDRDPASLLTGAGRDTPEKVEEYLLDSFLPAVYRRGRPGGRDWDADRAQRWLGYLAHHLAVARTPDLAWWRLGTGLRGSTRALVTALVAGLAIGLSDALFYTLVTGAPALALMDGASVGLIAGSLFGLVHWLTYTLTGKEAAPSAVRLRIRGRPRAATWTAGPRLVIGTLGGAAFGAVYGFAVGLVKAHHQNAGLGDALRTGLADSIVLCLVYGAAAGLSFCLLGLLETPLDMVSAVSPREVLATDRSTVLTQLAVWAPVFGTVVGVGLVVAVDLLQGHVGRLVLQPTFSVLVGTVSGIGGALGYTLTLTAWGQWWVLSRVWLPLTGRLPWAVAAFLDDAYQRGVLRQAGAVYQFRHARLQSRLAEAYRRG
>NZ_CP023696.1|WP_085921326.1|5475858_5476569_-|PE-PPE-domain-containing-protein
MTAAAALMPGTAARAEEAPHRYYIQIGGTGSAADAPGCTTTYGYVNRYLKGGTPVPVCYPASAGPWLNGRNAPDLSAPSYDSSVAQGYANLLAAVRETHREDPTARLTIVGYSQGAQAADAVLETIASGTAGVPRELVNGMLYADPKQPGTGMWAKVPRGLGAFGLTSTGPGPERFPGVPVARFCIRGDLACDATTPVAAVDFLLTDTHRRYFQDGNVMSRTITEEGLDGIYWYES
>NZ_CP023696.1|WP_031129426.1|5475410_5475815_+|DUF302-domain-containing-protein
MRYDRSVHLNTDFTTAVARTREALGEQGFGVLTEIDVTATLKAKLDHDMEEYVILGACNPALAHRALETDRSIGLLLPCNVVVRSDGGGCAVQALDPGTMVALTGLDGLRPVAEEATRRLDAALARLAADDSGS
>NZ_CP023696.1|WP_031129427.1|5473852_5475031_+|lipase
MSTGQNLITTPVTADYLRGHLDVEETAHGLLPHRLPARARRQIPDDRLAVAEAQPSGVRLAFRTRATTVHLDTLPTKRVYRGFPPPPDGVYDLLVDGRLTAQATVDGGNVRTVTDMRTQTAEFTPGPAGTARFTGLPGGEKDIEIWLPHAETTEVIALRTDAPVEPAPDSGRRVWLHHGSSISHGSNAVFPSAIWPALAAAAGDVELVNLGFGGGALVDPFTARAMRDTPADLISLKLGINVVNADAMRLRAFAPAVHGFLDTIREGHPTTPLLLISPLLCPTHEHTPGPLMPDLSGGTLRFRATGDPAETAAGRLTLTIVRDVLADIVEQRSAEDPHLHYLDGLDLYGEGDHAEFPLPDAVHPSPEGHRRIGENFARLVFADGGPFAGTTD
>NZ_CP023696.1|WP_031129429.1|5473241_5473811_+|TetR/AcrR-family-transcriptional-regulator
MVRAGLSPERLTLAGAELADEAGFDQVTLSALARRFDVKPASLYAHVENSHDLKTRIALFALEELADRVADAVAGRAGKDALAAFANAYRDYARTHPGRYEAARYRLDPRTAAASSGVRHAQMTRAILRGYDLAEPDQTHAVRMLGSVFHGFAALEAAGAFDHTDVAAQESWAWTLDSLDAALRSRSAP
>NZ_CP023696.1|WP_031129430.1|5472221_5472962_-|dienelactone-hydrolase-family-protein
MTTTITARTVEYPADGLTMVGHLALPAGAGRRPAVLLGPEGMGLGDVERRRADALAELGYVALAFDLHGGRYLGDPEEMLARCLPLLADPDRMRGIGHAALDVLRAEPRTDPDRIAAVGYGTGGAVALELGRDGVDLRAIGTVNATTTGRPGEAARIRCPVWAGVGSEDPIMPPARWNAFTAEMRAAGVDWRLTVYGGASHAFHHPPVDHPTVPGVGHHPQHARRAWRDVVALLAECLPVTGDPGA
>NZ_CP023696.1|WP_031129432.1|5471914_5472181_+|metal-sensitive-transcriptional-regulator
MKVEEEAASAVLNRLRRAQGQLAGVIAMIEAGRDCKDVVTQLAAVSRALDRAGFKILASGMRQCLAESEAGAPPMSEQELEKLFLTLA
>NZ_CP023696.1|WP_031129433.1|5471018_5471612_+|rhodanese-like-domain-containing-protein
MTTDATHAARAAGLSPAALRQQMEAGHAPRVLDVRTPGEFRTVHIPGSYNVPLDTLREHRGELLAHLDEDVVLVCRSGARAAQAEQALAEAGLPNLRVLDGGMTAWEAAGAPVNRGEARWDLERQVRLVAGSIVLVSGVTGIFVPGAHLVGTAIGAGLTFAALSNTCAMGMLLSKLPYNRGPRTDIRAVVAALRDRP
>NZ_CP023696.1|WP_031129434.1|5469506_5470895_+|MBL-fold-metallo-hydrolase
MFFAQYYLDCLSQASYMIADETTGKAVVVDPRRDVAEYLADADARGFTVVGVINTHFHADFVAGHLEMAARTGAWIGYGRRAETEYPIRPLADGEAVSLGDVTLKIMETPGHTPESISVLVYERADDAVPYGVLTGDALFIGDVGRPDLLASVGVTAEELGAMLHDSVQNKLMALPDEVRVFPAHGAGSACGKNLSTERQSTIGAQRATNYACRPMSRDEFVAIVTAGQSAAPGYFGYDAALNRQDRALFDPAAAPRPLTAEEFTARRAAGAVVVDTRDPQAFAAGHLRGALNIPADGRFAEQAGTVLPADAELLVVADQNREEEIVTRLARIGFDRVGGYLRSPDDALAALAEEVAPASRLTVAQVRAALDGDTPPVVVDVRNCGERAEHGAVDGALHIALGELPRRLDEIPRDRPLVLHCAGGHRSSIAASLLRHHGFTDVSDILGGYAAWAAQAPAPAA
>NZ_CP023696.1|WP_031129435.1|5468627_5469146_+|hypothetical-protein
MHVPTGAVRPTALLLASVLAAATLTGCTLLELTRDCEGTAARLEELAALGILGSRPDGATPARGFEEVDAGCRADSGEVVVHAERVYAFPGTRVEVAAHYRKAAARDGWEPDGAAGPDGLCFVRDGMALWVVPLTAESLMEDGLGGRSHSATGAGYSIGVETHVDGGSEAGC
>NZ_CP023696.1|WP_051839079.1|5479857_5480967_+|transcriptional-regulator
MPTTTARSAPGATVLTTGERDVLRALGCGLGDAEIAAALALPEHVVAELVVRVLGKLGLRDRAAAIVHAFDCGLVVPGRGPRGQVAAREPGGGRRTGAVPGPPLRVSVLGPLRTSLAGRPVDAGPVRQQAVLVALALSGGRSVSPRRLLADVWGEEAPDGNVVPVYVYRLRKSLRLGECRDAVIRRDRYGYGLARGVAEVDAACLDDLDTRSGAAERAGELAEAVRLCGRALGLFRGEPLAGLPGPLAEAQRLRLTRRRAALAQRKAECELRLGRHAEAVAGLSALALDEPLNEPVAATLMHALRRCGRRAEALAVFDRVRLRLADDLGVAPGEVLWQARRAALRGDGPATGRAGEYRPGTGRAGEGRA
>NZ_CP023696.1|WP_031129422.1|5481812_5482040_+|hypothetical-protein
MADSYRYRCGECGHRTAWGSESRGAAAIEAHYDRRHPEIVPGGVVEFRRGSSCGGSGCLVVLAVLVVLLVLASRS
>NZ_CP023696.1|WP_031129421.1|5482124_5482544_+|hypothetical-protein
MESELAALASLAASAVVSGLATAGWESAQRAIGDLWRRAHPERADTVVAELGEARADVLAARRDGDERTERELVGEWQTRLRRLLAAHPEMLPDLRRIVDEMGPPERRPDRRGGISVTAHASGGSRINVAGRDLTVDGR
>NZ_CP023696.1|WP_140160808.1|5482549_5483464_+|hypothetical-protein
MRAREPWDDFGPDGDDGFDDVYRGDQRIDARANNRSTVNAAGRDVRTTYFVSVSSAALAAVVGLVALLGVWQPWEETAVTGERDGAGTATATQYTGGGNTARAAPYREPTEPTGGESGGDREEPDPTPTSDPSDPPEPSAPPDPVDVAFASVRVGTCLSVYDDGWGRLSQDRPVAVDCGAGFAFTKVTMVTTLASHCPSGAGQYGWGHVNGDGSSVALCLDRVFAAGQCFPATLTRQADGTLGGQARLFSVWGCDRKQVPKGMNAKLVITAVQRGGTCPQRADRQTLQWRVFNGSATVCAVQTQ
>NZ_CP023696.1|WP_051839076.1|5484017_5485541_+|ATP-binding-protein
MGALITPVARPQRLHDREAEWDRLVAFVDDPRPGPAVGVVTGPRGHGKSYLLKALAQATGGFYYAGQEAAQAETLRAIARRYAHHAGLPHAPHWSGWPEALRDLAATGGGPAALVVLDGLPDLVRQSPGLPAAVAEVRRRLGTGPDGPSRLRLLLCGSTTPVMSRLLSASAGWVDEVVEVAPLDYRRARALWGVDDAALALRVHAVVGSGAAWRFDPAGDRPPTGPADFDRWVRTGVLDPRLPLFWRAGHLLDRVPDPWDAACHSTVAALATGRTTPGEIADFLDRPATDVPHILSHLEERGLVHGEPDAFQTGLVHYRIVEPLLAFDHAVIRPHRPDLADAGPREIGAFWREMRPVFERDVAGPHFARTCREWAARFAPPGTFAGTPVSALAGCAPRVSGHEPSGHESARVDVVVRGGRGHRPGPLLSIGLTSWADRMDTAHLDRLRGHLAHLAALGEDTGRTRLVCYGAAGFGRGLREAEADGEVVLVSPERLYGEDRRPAGGEG
>NZ_CP023696.1|WP_078915397.1|5485547_5486792_+|site-2-protease-family-protein
MRATVVLGRIAGIRVGVHWSVLLIFGVIVLGLAQGRLPQAHPGEGWPVYWAIGLLTAVVFFASLLAHELAHAIVARRNGVEVDDIVLWLLGGAARLKAEAPSPAAELRIAGVGPLVSLVLGGLFALATWGLDAVSAPGPVVEAAVWLAVINILLAAFNVIPAAPLDGGRLLRAFLWWRTGDRLRATAGATTAGRVFGWLLVAFGLLLFMRGDVFGGLWLAMIGWFLAATATAEGQQAQLRAVLAGVPVRDVMTPDPVTVPAGLTVARFLDDPRYRYRHSAFPVTGEGVDVGGGARPVVGLMTLDLARAVGEERRPAVTVGQAMLPLERAEVVDADTPLAEVLPRVEPGAEHRLLVLDGGRLAGIVSASDVSRAVTWLMTTAQRGAEARRGGDAADSGGRRGDWGQGWDDRSRGA
>NZ_CP023696.1|WP_031129415.1|5486892_5487228_+|hypothetical-protein
MSGYWTPAPHAVEQEDAETLARLLAAGSDPDEVFGDMTLLTHAIDVEGDGALQSRGPLTVHTTAALPAFGADPEPAAPGGRTPVDMAKHDGHDLATRLLRTHIGRRAAHGG
>NZ_CP023696.1|WP_031129414.1|5487289_5488585_-|phytase
MTSLVTAFALATGPAVPVTLTATVETPAVYDDEAGGNADADDPAVWVDPENPERSIVIGTLKEAGLDVYGLDGRRLQHIAAPEAPNEDASPGRFNNVDVVYGFELGGRKTDLALVSDRGRDRIRAYAIDPAAVAAGKPPLKDVTAPDVAPVFAANEAEVDDQRTSYGLTAFKDDDDAYVVVSQREETSLRLLQLKDRDGRVGYKTEDTLDLPDTFTLPDGGKWTPCADPGERPQVEGMAVDQEEHVLYAAQETVGLWRIEIDDEEFEKPKLVDRVREYGTPWTYDAEEEECVLDTENDPGFGGEHLSADAEGVTVYHAEDGAGYVLASSQGDDTFAVYDREGGNAYLGSFAVADGDATDGVQHSDGSTVVNVPLGTAFPKGMLVTHDGEATPADGDREGTNFKFTRWDAVAGAFPEPLKVDTESFDPRDAD
>NZ_CP023696.1|WP_031129412.1|5488835_5489006_+|50S-ribosomal-protein-L32
MAVPKRKMSRSNTRHRRAQWKASTPQLVPVTVDGNVLMVPQRLVKAYERGLLRPEG
>NZ_CP023696.1|WP_031129411.1|5489095_5490262_+|GTP-binding-protein
MGDPRLPVTVLSGFLGAGKTTLLNHVLTNREGLRVAVIVNDMSEINIDAALVRGGEAALSRTEERLVEMTNGCICCTLRDDLLEEVDRLAREGRFDYLLIESSGISEPMPVAATFAFPRDDGATLGDLARLDTMVTVVDAANFLPELHGGDGLAERGLDQYEEDERTVSDLLMDQIEFADVIVVNKLDLVGPADAARLRAALARLNPAARIVPAVRGRVAPGDILGTGLFDLERAQQAPGWVRELNGDHVPETEEYGISSVVFRSPRPFHPGRLYAFVTEDLDGGAFGCVLRSKGFFRLAGRPRIVGLWSQAGSVARFEPSGVAEEGQGQELVFIGTALDAEALGAALEGCLMAEGEEPPSDDPFPPWDAYGIDDACEHEHPALTQPA

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Crispr_ID: NZ_CP023696_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_18

5637367-5637452

Orphan

Consensus_repeat	Method
GGGACCACCCCCGCGTGCGCGGGGA	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP023696_18

>merge|NZ_CP023696|18|5637367-5637452|CRISPRCasFinder
GGGACCACCCCCGCGTGCGCGGGGACCACGCGTTGCCGACGCGGGCGACGGGCGACGCCATGGGACCACCCCCGCATGCGCGGGGA

>NZ_CP023696|18|17|5637367-5637452|CRISPRCasFinder
GGGACCACCCCCGCGTGCGCGGGGA	CCACGCGTTGCCGACGCGGGCGACGGGCGACGCCAT
GGGACCACCCCCGCATGCGCGGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_078915566.1\|5634695_5637050_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP023696.1\|WP_031131781.1\|5651161_5652502_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226669
NZ_CP023696.1\|WP_031135004.1\|5625598_5626201_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173776
NZ_CP023696.1\|WP_031131158.1\|5632826_5633231_+\|arsenate-reductase-ArsC	unknown	unknown	gnl\|CDD\|319973
NZ_CP023696.1\|WP_031131165.1\|5637755_5639285_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|238796
NZ_CP023696.1\|WP_031131153.1\|5631331_5632435_-\|ACR3-family-arsenite-efflux-transporter	unknown	unknown	gnl\|CDD\|213563
NZ_CP023696.1\|WP_051839427.1\|5654975_5656517_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP023696.1\|WP_031137102.1\|5627804_5629163_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|379355
NZ_CP023696.1\|WP_069978574.1\|5626420_5627587_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP023696.1\|WP_037937885.1\|5650370_5651165_+\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP023696.1\|WP_031131167.1\|5639966_5642684_+\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP023696.1\|WP_031131171.1\|5645037_5645961_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP023696.1\|WP_078915565.1\|5633628_5634597_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|365915
NZ_CP023696.1\|WP_031137104.1\|5629385_5629874_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP023696.1\|WP_078915568.1\|5648586_5649636_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380650
NZ_CP023696.1\|WP_031131169.1\|5643300_5644806_+\|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein	unknown	unknown	gnl\|CDD\|274816
NZ_CP023696.1\|WP_031131151.1\|5630193_5631255_-\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP023696.1\|WP_051839353.1\|5646167_5646992_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP023696.1\|WP_031131156.1\|5632431_5632740_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_CP023696.1\|WP_085921417.1\|5647206_5648418_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_078915566.1\|5634695_5637050_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.15425e-10
NZ_CP023696.1\|WP_031131781.1\|5651161_5652502_+\|ABC-transporter-permease	gnl\|CDD\|226669	COG4214, XylH, ABC-type xylose transport system, permease component [Carbohydrate transport and metabolism].	9.89607e-87
NZ_CP023696.1\|WP_031135004.1\|5625598_5626201_+\|hypothetical-protein	gnl\|CDD\|173776	cd01026, TOPRIM_OLD, TOPRIM_OLD: topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain of the type found in bacterial and archaeal nucleases of the OLD (overcome lysogenization defect) family. The bacteriophage P2 OLD protein, which has DNase as well as RNase activity, consists of an N-terminal ABC-type ATPase domain and a C-terminal Toprim domain; the nuclease activity of OLD is stimulated by ATP, though the ATPase activity is not DNA-dependent. Functional details on OLD are scant and further experimentation is required to define the relationship between the ATPase and Toprim nuclease domains. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general acid in strand cleavage by nucleases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	1.05408e-05
NZ_CP023696.1\|WP_031131158.1\|5632826_5633231_+\|arsenate-reductase-ArsC	gnl\|CDD\|319973	cd16345, LMWP_ArsC, Arsenate reductase of the LMWP family. Arsenate reductase plays an important role in the reduction of intracellular arsenate to arsenite, an important step in arsenic detoxification. The reduction involves three different thiolate nucleophiles. In arsenate reductases of the LMWP family, reduction can be coupled with thioredoxin (Trx)/thioredoxin reductase (TrxR) or glutathione (GSH)/glutaredoxin (Grx).	1.30822e-51
NZ_CP023696.1\|WP_031131165.1\|5637755_5639285_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|238796	cd01555, UdpNAET, UDP-N-acetylglucosamine enolpyruvyl transferase catalyzes enolpyruvyl transfer as part of the first step in the biosynthesis of peptidoglycan, a component of the bacterial cell wall. The reaction is phosphoenolpyruvate + UDP-N-acetyl-D-glucosamine = phosphate + UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine. This enzyme is of interest as a potential target for anti-bacterial agents. The only other known enolpyruvyl transferase is the related 5-enolpyruvylshikimate-3-phosphate synthase.	8.72594e-127
NZ_CP023696.1\|WP_031131153.1\|5631331_5632435_-\|ACR3-family-arsenite-efflux-transporter	gnl\|CDD\|213563	TIGR00832, Uncharacterized_transporter_slr0944, arsenical-resistance protein. The Arsenical Resistance-3 (ACR3) Family (TC 2.A.59) The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport. [Cellular processes, Detoxification, Transport and binding proteins, Anions].	5.2352e-142
NZ_CP023696.1\|WP_051839427.1\|5654975_5656517_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	2.55872e-126
NZ_CP023696.1\|WP_031137102.1\|5627804_5629163_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|379355	pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase.	2.83275e-15
NZ_CP023696.1\|WP_069978574.1\|5626420_5627587_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.11375e-53
NZ_CP023696.1\|WP_037937885.1\|5650370_5651165_+\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	2.75709e-104
NZ_CP023696.1\|WP_031131167.1\|5639966_5642684_+\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP023696.1\|WP_031131171.1\|5645037_5645961_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.55919e-70
NZ_CP023696.1\|WP_078915565.1\|5633628_5634597_+\|hypothetical-protein	gnl\|CDD\|365915	pfam00161, RIP, Ribosome inactivating protein.	4.26281e-14
NZ_CP023696.1\|WP_031137104.1\|5629385_5629874_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.35214e-45
NZ_CP023696.1\|WP_078915568.1\|5648586_5649636_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380650	cd19995, PBP1_ABC_xylose_binding-like, periplasmic xylose-like sugar-binding component of the ABC-type transport systems. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.	5.43139e-104
NZ_CP023696.1\|WP_031131169.1\|5643300_5644806_+\|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein	gnl\|CDD\|274816	TIGR03851, chitin_NgcE, carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein. Members of this protein family are the substrate-binding protein, a lipid-anchored protein of Gram-positive bacteria in all examples found so far, that include NgcE of the chitin-degrader, Streptomyces olivaceoviridis, and close homologs from other species likely to share the same function. NgcE binds both N-acetylglucosamine and the chitin dimer, N,N'-diacetylchitobiose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP023696.1\|WP_031131151.1\|5630193_5631255_-\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	4.23575e-43
NZ_CP023696.1\|WP_051839353.1\|5646167_5646992_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.57669e-80
NZ_CP023696.1\|WP_031131156.1\|5632431_5632740_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	5.13652e-17
NZ_CP023696.1\|WP_085921417.1\|5647206_5648418_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	5.41289e-70

>NZ_CP023696.1|WP_078915566.1|5634695_5637050_-|helix-turn-helix-domain-containing-protein
MGHGLRLEERWGGPLARTADGSSFGERLRALRLSAGLSQEELAHSAGVSVRTLADMERGRTRGPQRKTVRALALALALAPEDVRALEAAAAPGRLRSGSPPGPAAGGLCLPRDAHDFTARGRPLSVLTALADAIDPACPPVVVVSGAPGLGKTAFAVHAAHHLASRFPDGQWYLDLRAMDPEPVPPGDALRRLLGALGVAEHSLPRDVEDRAALFRSLAATRRLLLVLDNAADESRLRPLLPGTGACLTVVTSRNALGGLEAVHRLDLPLLRREEAVTLLTRIAGAERVAREAQSARDLADQCGRLPLALRIIGQRLAARPQESLAKLAALLGREERRLDLLQGGDLKVRSAFALSYQQLDDVSRRLLRRCALAAGPDVSPETAALLADVPLRDARLRLEDLCSRGLLQPDPMVERYRFHDLLRLFAAEQVAAEDDGAARDAALDRTARWTLARAGAAALHFDAEHHDDPTGDPDPATAPAGRDQARAWLEAEREQWIAALHHSRTTGRHRHVLDAAEAMHWFSDFTQHWKEWADVFRCAAESARALGSRREEATHLNYLAWAHNTCTHDPQAALEAADAAHSLALACDDRLQTGWALGYGAGALRRLGRMDEAVVRLRAAVTCLRGDGTTQGRLAVLTLLNALGELLRFHGQADEAVVHHLNSLELCRQGHPGVAPQLIAVYQAHTQRHLGNAYVALGSRRQAETHLRQALTIFEEVAIPAWSGAVQLELGRVLMGLDRPGEAHTVLTTALRTLAALRHPLQAEAAAELRALDRTRDERPRGT
>NZ_CP023696.1|WP_078915565.1|5633628_5634597_+|hypothetical-protein
MNMAPAELRTAQALPSPHLSPWQAPGKRLAAVLLTLVALLGFVNITNAAPAEAQTRYWTILHWEVQGMGSGASQDVERRYRRMIAELRESSGSHIGTDLMRTTTVTQRYIEVRVIDRWDTSNQHRLSLYFRADNLYLDGYTIVGRNYMFSDAPGYLTTRFGNQYPGSNALFERLGYSGHYSNLANAETRGAQSFGGPNLWGAISGLVNQGPHDASSRNRTAAVITATAEAARFGWIENRVGNSLGENGDYDGQAWQTQIGGFGTDLQNNWAALSRIVYRQQNGTASTPVMINGRRYASISDIVNGYHNHPRLAPFLTLGSIT
>NZ_CP023696.1|WP_031131158.1|5632826_5633231_+|arsenate-reductase-ArsC
MSEKPSVLFVCVHNAGRSQMAAAWLSHLAGDRVEVRSAGSAPADQVNPAAVEAMREVGIDISAETPKILTVDAVKESDVCITMGCGDTCPVFPGKRYLDWKLDDPAGQGVEAVRPIRDEIRKLVEGLIEEIAPR
>NZ_CP023696.1|WP_031131156.1|5632431_5632740_-|helix-turn-helix-transcriptional-regulator
MMTSVDTELMRVLGDPLRLRIVTLLARETLCTTHLVEETGARQTNLSNHLRVLREAGVVETEPCGRFTYYKLRPDVIASLAGQFAELAESARTAAENKRACP
>NZ_CP023696.1|WP_031131153.1|5631331_5632435_-|ACR3-family-arsenite-efflux-transporter
MTSTQAPAPTEETSVVAKLSTLDRFLAVWILLATGLGLGLGRLIPGLNDVLAEVEIGGISLPIAIGLLIMMYPVLAKVRYDRLDAVTGDRRLMVSSLVINWVLGPALMFALAWIFLADLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALNSVFQVIAFGVLGWFYLDLLPGWLGLGEGETLDISMGKIALNVVIFLGVPLVAGFLTRRIGEKKMGRESYEARFLPRIGPWALYGLLFTIVILFALQGKTITSQPLDVARIALPLLVYFTVMWFGTFLLGKAIGLNYDRTATLAFTAAGNNFELAIAVAIATFGVTSGQALSGVVGPLIEVPVLVALVYVSLAWRKKFAASAITTPAGK
>NZ_CP023696.1|WP_031131151.1|5630193_5631255_-|NAD(P)/FAD-dependent-oxidoreductase
MSGQHDVVVIGGGQAGLAAGYHLRRLGLDFVVLDAQAAPGGAWPHTWDSLRLFSPAAYSSLPGRIMPPQPGETYPDAAHVVDYLTDYEQRYDLPVVRPVRVEAVHRDGGFLRVESATGTWRARAVISATGTWWRPFLPAVPGRAGFRGVQLHTVGYRRPADFAGRKVVVVGGGNSGAQIAADLAHGTDLTWVTRRPPRYLADDIDGRALFDAATARRRALDEGRSDTGGVASLGDIVAVPPVREARDAGLLKAQPMFARLTPTGVEWADGTRADADAVIWCTGFRPALSHLAPLGLRGPRGRIPSAGTRALREPRLHLLGYGDWTGPASATLIGVGRPARDAARSVGELLGTR
>NZ_CP023696.1|WP_031137104.1|5629385_5629874_+|N-acetyltransferase
MNITPLTADHADEVIAIYQAGIDEGDATFETAAPAWDRFDAAKLPEHRFVALGEGGRVLGWVAAGRVSDRRAYAGVVEHSVYVHPAARGRGVATALLRALLGSTDAAGIWTVQAGVFPENAASLAVHERAGFRTIGTRERVGRLHGVWRDVVLLERRSPHVH
>NZ_CP023696.1|WP_031137102.1|5627804_5629163_-|FAD-dependent-oxidoreductase
MSEQQLPVVVIGAGPTGLAAAAHLVGRGLDPLVLEAGAAAGSAVREWGHVRLFSTWSEVVDPAAEKLLAPTGWVRPDGATYPSGADWAERYLQPLADVLGDKVRYGATVTGVSRAGRDRVVDADRESQPFTVLIETADGSEERILARAVLDASGTWATPSPMGGDGLPALGEKAASARVSYRVPDLKDPAVRARYAGKRTAVVGSGASAFTALAALADLSESDDGAGTRAVWILRRGISGSTFGGGAADQLPARGALGLAAKAAVDDGHADAVTGFRTAAVERDGERLVLVGEDGRRLDPVDEVIVLTGLRPDLSFLDELRLGLDERLRAPVALAPLIDPNQHSCGTVYPHGVKELSHPEKDVYLVGMKSYGRAPTFLAMTGYEQVRSVAAALAGDREAAERVELTLPETGVCGGAGLFDAPEATPADGGGCCAAPATLTIGAGAPASSGGC
>NZ_CP023696.1|WP_069978574.1|5626420_5627587_+|AI-2E-family-transporter
MPASLSPTKTAAALRTSARVCVELLLVLVTVSAALWLLGRMWSVVWPLIVGLFLTTLTWPLAGFLRRRGWPPALAASVVTVAFLLAATGIVALIAVPVSSQSGELAEGAVEGIQRVREWAAGPPLNIGDDQITSAFDTAVAQLQDGIGSMLTAVVTGVSTVVNGVVTAFLALFLMFFFLKDGPRFLPWLSRQLPGRLATDVPVVAARSWETLGAFVRSQAFVGLIDAVLIGVGLWILDVPLVLPLAVLTFVSAFVPIVGALFAGLVAVLIALVSNGLTDALIVLAIIVGVQQLEGNVFQPMIQSRGLGLHAAVVLLAVTLGGSLAGIVGSLLAVPAAALIAVVWNYLRDQLTDPPAATPPPAEPHPHAPTPPHAAATDEPLPTTATAP
>NZ_CP023696.1|WP_031135004.1|5625598_5626201_+|hypothetical-protein
MADMRTFHEAIDGWAAGGPGGPARELAARLGVRAAVLLEGRSDVAALDALAAARGRDLAAEGICAVSMGGATNVGHYTRVLGPEGLGLRLTGLCDERERPHYARCLDERDLFVCVADLEDELIRALGVPRVRELAEREGESRALRTFLNQPAQQDRTPRQQLRRFIGTRSGRKIRYGRVLVEALPPAETPAPLAALLAAL
>NZ_CP023696.1|WP_031131165.1|5637755_5639285_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MADDYLVRIGRLIRDARQHRGWTQAQLAEALATSQSAVNRIERGNQNISLEMIARIGEALDSEIVSLGYAGPMHLRVVGNRRLSGAIDVKTSKNACVALLCASLLNKGRTVLRRVARIEEVYRLLEVLSSIGVRARWINDGRDLEIVPPAELDMEAVDADAARRTRSIIMFLGPLLHRLRSFKLPYAGGCDLGTRTIEPHMIALRRFGLDITATEGLYHAQVDPAVTPDRPIVLTERGDTVTENALLAAARHDGVTVIRNASSNYMVQDLCFFLEALGVRVEGIGTTTLTVHGVPHIDVDVDYCPSEDPVEAMSLLAAAVVTESELTIRRVPIEFLEIELAVLEEMGLDHDRSTEYTADNGRTRLVDLTVRPSKLEAPIDKIHPMPFPGLNIDNVPFFAAIAASAQGQTLIHDWVYDNRAIYLTDLNRLGGRLQLLDPHRVLVEGPTRWRAAEMMCPPALRPAVVVLLAMMAAEGTSVLRNVYVINRGYEDLAERLNSVGAQIEIFRDI
>NZ_CP023696.1|WP_031131167.1|5639966_5642684_+|aconitate-hydratase-AcnA
MSANSFDARSTLRVGDESYEIFRLDKVEGSARLPYSLKVLLENLLRTEDGANITADHIRALGGWDSQAQPSQEIQFTPARVIMQDFTGVPCVVDLATMREAVKELGGDPSKINPLAPAELVIDHSVIADKFGTRDSFAQNVELEYGRNKERYQFLRWGQTAFDEFKVVPPGTGIVHQVNIEHLARTVMVRGGQAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPRVVGFKLTGELPTGTTATDLVLTITEMLRKHGVVGKFVEFYGEGVAATSLANRATIGNMSPEFGSTAAIFPIDDETLNYLKLTGRSEQQVALVEAYAKEQGLWLDPSAEPDFSEKLELDLSTVVPSIAGPKRPQDRIVLANAAEQFAQDVRNYVDDVDEAGKESFPASDAPALTPNGAPSKPVQVTAPDGSTYEIDHGAVTVAAITSCTNTSNPYVMVAAALVAKKAVEKGLTRKPWVKTTLAPGSKVVTDYFDKAGLTPYLDKVGFNLVGYGCTTCIGNSGPLPEEVSKAVNEHDLAVTSVLSGNRNFEGRINPDVKMNYLASPPLVVAYALAGSMKVDITKDALGTDQDGNPVYLKDIWPSEAEVNEVVAGAIGEDMFSKSYQDVFAGDAQWQALPIPTGDTFEWDAQSTYVRKPPYFEGMTMDPAPVEDIAGARVLAKLGDSVTTDHISPAGAIKADTPAGQYLTEHGVERRDFNSYGSRRGNHEVMIRGTFANIRLRNQIAPGTEGGYTRDFTQDGGPVSFIYDASQNYQAAGVPLVVLAGKEYGSGSSRDWAAKGTALLGVKAVIAESYERIHRSNLIGMGVLPLQFPEGASAQSLGLTGEETFSVSGVTELNEGRTPRTVKVTTDTGVEFDAVVRIDTPGEADYYRNGGIMQYVLRNLIRG
>NZ_CP023696.1|WP_031131169.1|5643300_5644806_+|carbohydrate-ABC-transporter,-N-acetylglucosamine/diacetylchitobiose-binding-protein
MGSTSASNDGSTPDGALDGTADGTPGGHAGPGRRDLIKRSAALGLVTLPALGFLSACATGGGGGGGDAPTAAAGEKTAKNPLGVKEGAPLEAFIFKGGLGDQYAKDAEADYQTTYKAEVKHTGTQQVGPKLTPRFAGGNPPDVIDNSGADHLDMNKLSTQGQLQDLAALLDAPSMDDPAKKVRDTIHPSTIEKGRHGDRFDVLYYAFTVYGTWYSRKLLESRGWAYPKTLDEMVALCGEIKKAGIAPWTYAGKYPYYVHFNLFGQIAKIGGMEKWIAIDNLEPGAWTSNDAVRQVAEHYEELAAKKYFLEGSQGLTHIQSQTAWNKGKAVFLPNGSWVENESAPTTPADFGMSVGALFDGSGDALPHGTLRAEPSEPYIVAAKGRNPVGGMELLRIMLSKKHAQNFATKVKSLTCVVDATDGMSLSPGLSSASQVFKAAGENVISLQLQEWYPALTDEKIGGLTGQLLAGELKAADWIRKTQAEADKVARDSSVTKFKRTA
>NZ_CP023696.1|WP_031131171.1|5645037_5645961_+|sugar-ABC-transporter-permease
MQHGKYRFIAGFLAPPLIVYAVFVVSPFVQAFQISLTDWSGLVGSARFVGADNFVRLWESDEFWNALRHNVYMLAFVPLVTLALGLFFAFMLNVGGRRRRNEVVTGVAGARFYTFVFFFPQVISITIIAVIWFNIYNPDPDDGMLNSLLGAVGLDGLQNAWLGEKSIALWCISAVMVWGHVGFYVVLFSAAMASIPRDIYEAALLDGASRHHTFFRITLPLLWDTVQTGWVYMGIIALDAFALVQIMSVNMGGPDGATDVMPLRLYLTAFRDSQYGYAAAMGVAMLAVTMAFAVLTLRFARRERIEY
>NZ_CP023696.1|WP_051839353.1|5646167_5646992_+|carbohydrate-ABC-transporter-permease
MLNVFSHGILVLWALMVGVPLLWVLWSSFKDSNGILTDPWGLPTVLHWENWSNAWDEANMGRYFVNTSIVVGGSVVGTMVLGSMAAYVLARFTFPGNRIVYYLFVAGMSFPVFMLVIPLFFVMRDFPGSSLLATYHGLILVYIAYSLPFTVFFMTAFFRTLPTSVAEAAMIDGASHTRTFFQVMLPMAKPGLISIGIFNFLGQWNQYLLPMVLNQQEDKYVLTQGLAMIALQQGYENDWGALMAGMVIAMLPVLVVYAVFQRQVQAGLTAGALK
>NZ_CP023696.1|WP_085921417.1|5647206_5648418_+|ROK-family-transcriptional-regulator
METPGSQTSLHRANLERVVRAVRMAGSLTQAEIARTTGLSAATVSNIVRELKDGGTVEVTPTSAGGRRARSVSLSGDAGIVIGVDFGHTHLRVAVGNLAHQVLAEESEPLDVDASSAEGFDRAEQLVKRLIETTGIGPGKVIGVGLGVPGPIDVSSGTLGSTSILPGWSGINPGQELSRRLGVPVYVDNDANLGALGELVWGAGRGVRDLAYIKVASGVGAGLVIDGQIYRGPGGTAGEIGHITLDESGPVCRCGNRGCLETFAAARYVLPLLQPSHGPDLTMERVVRLAREGDPGCRRVVADVGRHIGSGVANLCNLLNPSRVVLGGDLAEAGELVLAPIRESVSRYAIPSAARQLAVSPGALGGRAEVLGALALVLSEMGDSTLLDGARPSGRRPAAPAFT
>NZ_CP023696.1|WP_078915568.1|5648586_5649636_+|sugar-ABC-transporter-substrate-binding-protein
MALSLAACGKAGDGDSAGGGGDGKTIGLLLPENKTTRYETFDRPIIEAKIKELCSDCEVKYNNAAQDTETQKKQFDALVTQGVKVIILDAVDYKATKSWVEQADKKGVKVVAYDRLAEGPIAAYVSYDNEKIGRLQGEALVKALGAQAKSANVVMINGSPTDPNAPLFKKGAHGVLDQQVGKIVYEQDIPDWSPDEANKKMGAAIDSLGKNGFQGVYSANDGMAGGIITALEKQGVKVPVGGQDAELAGLQRILKGQQAFTIYKQIKPEAETTAEIAVAILKGEKFDQLTPTKVTSLTGEFKDIPAKLYDARIVTKDNIADTIIADQVYKAADLCTAEYKAACEAAGIK
>NZ_CP023696.1|WP_037937885.1|5650370_5651165_+|sugar-ABC-transporter-ATP-binding-protein
MIHVSATPVLALRGVSKRFGAVQALTDVDLEIHAGEVVALLGDNGAGKSTLVKTISGVHPIDEGAIEWEGRPVRVARPNDAQELGIATVYQDLALCDNLDVVANLFLGTELRRASVLDEIAMEKRAKELLDTLSIRIPSVRIPVASLSGGQRQVVAIARALIGAPKVVILDEPTAALGVEQTAQVLDLVERLRENGHGVILITHNMADVRAVADRAAILRLGRNNGVFSVKDTSHEEIIAAITGATDNAVTRRQARTATKEDAK
>NZ_CP023696.1|WP_031131781.1|5651161_5652502_+|ABC-transporter-permease
MSDLTKTPETPETPETPETAEDRGPAAPSGAEQSAAPVPAVDPRLLVREEGLKGYWTEFTRKVRGGELGSLPVLVGLIVIAIVFQSQNGNFLSAGSVANIAVYSSGLGIMAVGIVFVLILGEIDLSVGSVAGVGAAVWAVLSVSNGLGDWLAVLAALLVGLALGLLHGFFFAKVGVPAFVVTLAGFLGWSGLQIWLMGKEGTINTPSGSFVENLTGYYFEDKAAAYGLALVAVLLYAGSLLLDVRRRRAAGLPYRPASEVALRAGAVAVLCFAVAYVLNEPAGARGLPLALVLFLAVLLAADFVARRTSFGRKVFAVGGSAEAARRAGINVDRIRITVFGLSGLLAAFGGLFVASLSGGASKSLGGGNTLMLVIAAAVIGGTSLFGGRGKVWSALLGMVVIQSIQQGLNMLGMASEIQYMITGAVLLVAVVIDSVSRRTQKDAGRA
>NZ_CP023696.1|WP_051839427.1|5654975_5656517_+|amino-acid-permease
MSTQSGPPAGRKSGLFRTKSVEQSIQDTEEPERGLRRSLSALDLTIFGVGVIIGTGIFVLTGKVAKENAGPATALAFVAAGVVCALAALCYAEFASTVPVAGSAYTFAYASLGELPAWIIGWDLVLEFALGTAVVAVGWSGYVRSLLDNAGWRLPDSLSGSEVAEGFGFDLLAFLLVLLLTGVLVLGMKLSARLTAVVVVIKVTVVLVVIVAGAFFVKAANYQPFIPETQKQPGGAGLDAPLVQLLFGYEPTNFGVMGIFTAASIVFFAFIGFDVVATAAEETRVPQRDMPRGILGSLFICTALYVAVSIVVTGMQNYTRLSVDAPLADAFKATGHPWYAGFISFGAAVGLITVCMILLLGQTRVFFAMSRDGLLPRFFSRTHPVYSTPYRATVLLGVAIAVIAGVTSIDELATLVNIGTLFAFVIVAVGVVILRRTRPDLPRSFRTPLVPWLPAASVAASLWLMLNLPIETWIRFAAWMALGVVVYFLYGRTHSRLAPGSATSRDEPPAPRR

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Crispr_ID: NZ_CP023696_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_19

5815368-5815485

Orphan

Consensus_repeat	Method
TTCGGCTCGTTGCGCCTCCGGGCGCTGTGAGCGGGTCCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_19

>merge|NZ_CP023696|19|5815368-5815485|CRISPRCasFinder
TTCGGCTCGTTGCGCCTCCGGGCGCTGTGAGCGGGTCCCGGACGACCGAACGTGCTCAGCACTGCGTGCTGCTCTGTTTCGGCTCGTTGCGCCTCCGGGCGCTGTGAGCGAGTCCCGG

>NZ_CP023696|19|18|5815368-5815485|CRISPRCasFinder
TTCGGCTCGTTGCGCCTCCGGGCGCTGTGAGCGGGTCCCGG	ACGACCGAACGTGCTCAGCACTGCGTGCTGCTCTGT
TTCGGCTCGTTGCGCCTCCGGGCGCTGTGAGCGAGTCCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_078915684.1\|5819109_5820531_-\|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl\|CDD\|226017
NZ_CP023696.1\|WP_031136243.1\|5824505_5824862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_051839572.1\|5820527_5822138_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|99743
NZ_CP023696.1\|WP_031136245.1\|5825044_5827426_-\|glycoside-hydrolase-family-65-protein	unknown	unknown	gnl\|CDD\|224471
NZ_CP023696.1\|WP_031132795.1\|5815527_5816790_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340883
NZ_CP023696.1\|WP_031132793.1\|5813499_5815347_-\|siderophore-synthetase	unknown	unknown	gnl\|CDD\|226715
NZ_CP023696.1\|WP_031135879.1\|5804087_5806181_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP023696.1\|WP_037938193.1\|5809224_5811312_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|236720
NZ_CP023696.1\|WP_078915685.1\|5816786_5817446_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|379237
NZ_CP023696.1\|WP_031132791.1\|5812699_5813503_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP023696.1\|WP_037938197.1\|5807526_5809065_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP023696.1\|WP_031136241.1\|5824219_5824498_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_037939635.1\|5822455_5823796_-\|diaminobutyrate--2-oxoglutarate-transaminase-family-protein	unknown	unknown	gnl\|CDD\|235892
NZ_CP023696.1\|WP_051839961.1\|5828823_5829777_-\|class-A-beta-lactamase	unknown	unknown	gnl\|CDD\|185339
NZ_CP023696.1\|WP_031135877.1\|5803189_5804119_+\|glutaminase	unknown	unknown	gnl\|CDD\|234880
NZ_CP023696.1\|WP_078915683.1\|5811308_5812367_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NZ_CP023696.1\|WP_078915864.1\|5806529_5806928_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759
NZ_CP023696.1\|WP_037938195.1\|5817331_5819113_-\|siderophore-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226715
NZ_CP023696.1\|WP_037939407.1\|5800872_5803014_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP023696.1\|WP_031135752.1\|5799766_5800765_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_078915684.1\|5819109_5820531_-\|SidA/IucD/PvdA-family-monooxygenase	gnl\|CDD\|226017	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	4.99353e-166
NZ_CP023696.1\|WP_031136245.1\|5825044_5827426_-\|glycoside-hydrolase-family-65-protein	gnl\|CDD\|224471	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism].	0
NZ_CP023696.1\|WP_051839572.1\|5820527_5822138_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|99743	cd06450, DOPA_deC_like, DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.	9.91375e-65
NZ_CP023696.1\|WP_031132795.1\|5815527_5816790_-\|hypothetical-protein	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.000194723
NZ_CP023696.1\|WP_031132793.1\|5813499_5815347_-\|siderophore-synthetase	gnl\|CDD\|226715	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism].	1.00956e-147
NZ_CP023696.1\|WP_031135879.1\|5804087_5806181_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	1.59413e-75
NZ_CP023696.1\|WP_037938193.1\|5809224_5811312_-\|iron-ABC-transporter-permease	gnl\|CDD\|236720	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB.	3.75864e-164
NZ_CP023696.1\|WP_078915685.1\|5816786_5817446_-\|acetyltransferase	gnl\|CDD\|379237	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	5.56223e-56
NZ_CP023696.1\|WP_031132791.1\|5812699_5813503_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	1.4385e-119
NZ_CP023696.1\|WP_037938197.1\|5807526_5809065_+\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.97494e-145
NZ_CP023696.1\|WP_037939635.1\|5822455_5823796_-\|diaminobutyrate--2-oxoglutarate-transaminase-family-protein	gnl\|CDD\|235892	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional.	0
NZ_CP023696.1\|WP_051839961.1\|5828823_5829777_-\|class-A-beta-lactamase	gnl\|CDD\|185339	PRK15442, PRK15442, beta-lactamase TEM; Provisional.	1.2097e-65
NZ_CP023696.1\|WP_031135877.1\|5803189_5804119_+\|glutaminase	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	9.87911e-177
NZ_CP023696.1\|WP_078915683.1\|5811308_5812367_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	2.15037e-69
NZ_CP023696.1\|WP_078915864.1\|5806529_5806928_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	4.02509e-11
NZ_CP023696.1\|WP_037938195.1\|5817331_5819113_-\|siderophore-biosynthesis-protein	gnl\|CDD\|226715	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism].	7.69046e-111
NZ_CP023696.1\|WP_037939407.1\|5800872_5803014_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	1.13228e-159
NZ_CP023696.1\|WP_031135752.1\|5799766_5800765_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	4.26802e-79

>NZ_CP023696.1|WP_031132793.1|5813499_5815347_-|siderophore-synthetase
MTDGHHPVPELADVSPESWREANRRLLAKTLSEFAFEELITPLELEGRGEGEDEDEGGGGGAGRYRVDLDSGVSYAFSATRGALGSWRVAGDSVTRGAAGLLGNEIETPAWDVQRFLVDCAGTIGTDAPTLGMYLTEVSATLAVDAARVEHGGRTAAELRELDHAELECAMTGHPTLVANKGRIGFSASDVRAYAPEAGRPVALKWIAVHRGLGEFRGVPGLSERAVVGHELDAGTVAAFRARVEAAGGDPDAYVWMPVHPWQWDHAVQVLFAGEVAQRRIVPLGDSADVYLPQQSVRTMTNVSDRGRYDVKLPLKIVNTLIWRGIPPHCTQGAPLTTQWLTGLLGRDGLLRDELRTVFLGEVASVTVRHPYLDRVPDMPYQHLETLGCIWRESVSSRKDEGERVRTFASLLYVDEQGTSFAAELARASGLPAEEWLSRLFETVLHPVLHVMYTYGITFNPHGQNTLVGYDADDVPRRLFLKDFVDDVSVSHTPVPERGPEPDGHDHVLPRKNPVVIRQHVVDQLLLGHFRYLAPLAAEQMGVDEERFWRLVREAVVSYQRRFPERKDRYAEYDMLAAEFPRYPFNTDRLVVTRYVDRALRHALRPNGTVPNPLS
>NZ_CP023696.1|WP_031132791.1|5812699_5813503_-|ABC-transporter-ATP-binding-protein
MSVEISARELTLGHGGEPVVRGVDVTPAPGAVTALVGPNGSGKSTLLRALARLHSPDGGRIVLDGRDLAAYRPRELARRLSFLTQSPLVPAGVTVEELVAYGRHPHRGLLARDGDGDREAVSWALDATNLRPLAERTLDRLSGGERQRAWIAMALAQRTGLLLLDEPTTYLDIRYQIEVLRLVRRLADEHGITVVVVLHELNQAAAFADAMVVLAGGRIVASGPPAEALTEETVRTAFRIDTTVTVDPRTGVPTCLPTWREPSPAVT
>NZ_CP023696.1|WP_078915683.1|5811308_5812367_-|iron-siderophore-ABC-transporter-substrate-binding-protein
MRTPPRTSTARTASTGHTGHTGHTGRTGRPALAGLLAAAALAVTAAGCGSAAEEAGGGSPAGDGGGGGVTVTHLKGSTTLKAPARKVVALEWTYAEDLLALGVSPAGVADVEGYGQWVTGGPRFGADVRDVGTRQAPSLETIKALKPDLIITSKVRSEANYAQLNEIAPTLMFDPYSADGEYEEMRATLKTIGTAVGRPEAADTALKELDAKIGAAKRKLDAAGEGGTEVTVARGYTTDGAAVVEVLTGSTIPGGLLPRLGLRNAWRGQADAYGMSKVDIEGLKPVEKSSLLYVAARNDDVFATALPKNALWRNLDFAKNDRVHALDPGTWFFGGPYSTARVADEIADALTS
>NZ_CP023696.1|WP_037938193.1|5809224_5811312_-|iron-ABC-transporter-permease
MTGIATRPAEGRRDAGPGRTGKAERLPAGPAAVVAGGVLALLAVSAAHLGYGRGDIGHGDLLRLLAGGGDADTWSVLLGGRLPRTLAGLVAGAALAVAGCLLQSSVRNPLASPDTLGVTAGTYLAVTVSAITGFSPGDLPRGGVAFAGGLLAAALVHTVAGGSRGRPAHLVLAGVSVTLALSSVTAVLVVLFQEETGAVFFWGHGSLAVADSARSLTVLPLLAAGLGGGLLLARTLDILGTGDETARGLGVPVGRVRLTAVLLSVLLTACAVAVTGPIGFVGLAAPHLVRLAGVRRHVVLLPAAALWGATLLLAADLLARVTSPTGNEVAAGVVTALFGAPLFLWLARRLPSEPVAPGTVMPGRRGRRLPYPPLLAGGAAVVAALLAGGLVLGDIAVPVADLPGLLAGGGDELLRGVVLEYRLPRLLVAALAGALLAVAGGIVQTVSRNPLADLTVMGVSGGAGFGAALVLVALPAVPYALLPVAALLGGTAAFALTYGLSLRKGSVAPERLVLVGIGTFALTSAATDYLVVGARFQVAQALTWLSGSTYARDATDLSVLAGAAAVGVPLLVVSFRRLDLLALGEDTPRTLGVPLERTRLAVLVLAVALAACAVAVVGTVAFVGLVAPHAARMLVGSRAHRLLPVAGLLGAALMIAADTVGRTAIAPAEIPSGLLAALIGTPYFVWQLRRGHRGA
>NZ_CP023696.1|WP_037938197.1|5807526_5809065_+|SDR-family-oxidoreductase
MCLVTGATGYIGGRLVPELLDAGYRVRCLARTPAKLRDHPWAGRVEIVRGDVTDPESVSEAMRGASVAYYLVHSLGTGGGFEDTDRRGATVFADAARAAGVRRLVYLGGLTPVGVPERDLSPHLRSRDEVGRLLAASGVPTTVLRAAVILGSGSASFEMLRYLTERLPFMVTPRWLHTRIQPIAVRDVLRYLVGSAAMPPEVSRSFDIGGPDVLTYRDLMRRYAAVAGLPPRVILPVPLLTLRLSSLWVGFVTPVPASIARPLADSLRHEVVCHEHDIARYVPDPPGAPLGVDDALALAVRRVREARVATRWSSASVPGAPSDPLPTDPDWAGGSLYTDERERPVDATPERLWRIIEGVGGDNGWYSFPLAWAVRGWLDRLVGGVGLRRGRRDAATLRAGDSLDFWRVEEIERGRLLRLRAEMRLPGLAWLEMYAERDERGRTRYRQRALFHPRGLLGHAYWWSVAPFHAVVFGGMARNITKAAEKPTPDLATGANPDTDRATNADPTTTPH
>NZ_CP023696.1|WP_078915864.1|5806529_5806928_-|MarR-family-transcriptional-regulator
MNGEVNRLVHTFAAAQGLHPTDVQALGAILDADEPMTPGRLREHLGLTSGAVTACVDRLERAGHIRRSRESTDRRVVHLHYEAGARAAARAFFLPLATAAEAATARFAPEELDAALRFLTALNEELGRDGAR
>NZ_CP023696.1|WP_031135879.1|5804087_5806181_-|MMPL-family-transporter
MSSSTVLARRLLPALLIAVWLAVGGGLGPYAGKLGEVATNDQAAFLPDDAESTRVLDAQADFRQEESLPLVVVWTADDGGRLDPAAREAATRQLASLAGTEGLVGAPSPALPSEDGEALQGVLRLAPDLGDELEGVLDRVTAAAEEVSGTRVYLAGPAATQADLKDAFAGIDGLLLGVALTTVLLILLLVYRSVLLPFMVILTAVFALGLACAVVYALADADVVRVDGQVQGILFILVIGAATDYALLLAARFREELGRNEDRYAAMRSALRQSFGPIVASAATVALGLLALLLSDLTNNRALGPVGAIGIVCAVLGALTFLPAVLVLLGRTAYWPARPKPATDGAGHGVWTKVAALVDRAPRRVWAVTLAALVACAAFAPTLTARGVPLDEIFVNDAPSVTAGKVLAEHFPGGSGNPAVIITDASALPAVAKAAEETDGVASVVPVTASGRPGGGPPLVVDGRAQLSATLEAAPDSDAAKETLVRLRDAVHAVPDADALVGGYTAQQYDTQRTSERDRMVIVPVVLVLILLILVGLLRSLLLPVLLVATVALNFLATLGVSALVFEKLLGFTGTDASVPLYGFVFLVALGVDYNIFLMSRVREETFLHGTREGVLRGLTATGGVITSAGVVLAATFAALAVIPLAFLLQIAFIVAFGVLLDTLVVRSLLVPALVRDIGPVSWWPSSLRTRTGPSGS
>NZ_CP023696.1|WP_031135877.1|5803189_5804119_+|glutaminase
MSSAVAPAFQPVLDQIAADIAARPGRGRPADYIPALAEADTSRFGMAVAEPDGTVYGVGDWRHPFSAQSITKAFTLALTLALEGEALWEHVGREPSGNPFNSLVQLEYENGIPRNPFINAGALVVTDRLHALTGDASGTLRAFLRAESGRQELDFDLAVAASEAAHGDRNAALAHFMASYGNIRTPVPELLEQYFRQCSLETSCADLALAAGFLARHGIRADGSSLLTRSQAKQVNAVMLTCGTYDAAGDFAYRVGLPGKSGVGGGIVAVVPGRCTLCVWSPGLDERGNSVAGVAALDRFTTLTGLSVF
>NZ_CP023696.1|WP_037939407.1|5800872_5803014_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MAATATPHLLGTPAERVEGRAKVTGAARYAAEHTPPGCAYAWPVPAGVACGRLTGVDITDAMAQPGAIAVLTPFNAPRFAAPPDDAELDVLQYDSVPHRGWYVALAVADTPENARAAAAAVRVTCAGHGDEPEPHDVVLAEDHPDAYTPEKANGGHPAHRERGDAAAAFASAPVRVDTGYRVPPLHNHPMEPHAATAHYAGGRLTVYDSCQGTGPVRAVLAALFDLPEDRVTVVAEHVGGGFGGKGTPRPHVVLAAMAAIHTGRPVKLALPRRHLPSVTGHRAPTLHRLRLGAETDGTLVSVSHEVTTHTSRVNEFVEQAAVPARVMYGSPHSLTTHRVVPLDVPSPSWMRAPGETPGMYALESAMDELAGALGMDPVDLRVRNDPATEPDSGRPFSSRHLVECLREGARRFGWDRRDPRPAAHREGPFLVGTGVAASTYPVLVSPSAASATAHPDGTFTVRVNATDIGTGARTVLAQVAAAALAVPLEAVRIEIGSTRLPRAPLAGGSSGTASWGWAVHRACEALTRTVARHAGPLPDGGLTATADTADEARRTPPYARHAFGAQFAEVRVDTVTGEVRVRRMLGVFAVGRVLNARTARSQLVGGMVMGLGMALTEHSTMDAAHGDFTECDLASYHVPAHADVPDIEAHWIDEDDTLLNPMGSKGVGEIGTTGAAAAIGNAVHHATGVRFRELPLTPDRVLPALLSAGGPTA
>NZ_CP023696.1|WP_031135752.1|5799766_5800765_+|xanthine-dehydrogenase-family-protein-subunit-M
MKPFAYVRARTVEEATAAHAGRPGARYLAGGTNLVDLMKLGVETPDTLVDITRLPLDTVEELPDGGLRAGATVRNSDLAAHPLVRARYPAVSRALLSGASAQLRNTATTGGNLLQRTRCPYFQDLTKPCGKRAPGSGCGARDGVHRDHAVLGHSARCIATHPSDLAVALAALDADVELAGPDGERSVPAAEFHRLPGDRPERDTVVAPGELVTAVTLPAATAGLPSAYRKARDRASYAFALVSVAAVLDLAADGTVRRLGLAFGGLAHRPWRARRAEEALRGAPPTAAHVSRALAAELDAAEPLRDNAYKVPLAHRLAADVIAGLAGAPRPS
>NZ_CP023696.1|WP_031132795.1|5815527_5816790_-|hypothetical-protein
MSTGARGRPVLLAAAGLHMVTQSALAPFYPALFRAAYGVEALAATGAFLVACQVAAVAALPLWGRALRRVPLGRLVTAGQSAAVLLAAGLVLAPSYAVFTGVSVLLVAAKAVVLLAYPGLARSHPRGVLPGVVQYVAVLHGASVVATLLGGLVVAVPEPRTALPLLALLEAVLLVACLRVLRPGAGPPACGAGTPAGAPGPPVGGAVWRPAVYVLLTTVAVYAARPYFTEYVTAAGASAGAAAVLFVLPHAAVLALLPAAAALRARLGGRLFRYGMLVAAAGLAAQAAVTEPVWLAAARLVFGAGLALGQVALDERVVAASGSGAAYSLIAVGQTAGLLLAPLIATGAATAALWAPLLTGGALLAALALTAPALGGEGRAPDARVEPKGRAGAGRPIARRHAVLSTFGRPASAHSAPEAE
>NZ_CP023696.1|WP_078915685.1|5816786_5817446_-|acetyltransferase
MQGEPADAGARHGRADRPAGGPVGLRGHRQPPGGGAQVTGEALVVSEAVPDVGAFTLRAVDPAADAELVHGWMNDPEVAAFWELAQPAERIGAYLREQVGSAHSTPYVGCADGVPMSYWEVYRADLDPLRHHYPARPRDVGVHLLLGPSAYRGRGLGAVLLREVAQWLLRTDVYAERVVAEPDVRNERSVRVFERAGFRLLRQIELPGKRAAFMVRERA
>NZ_CP023696.1|WP_037938195.1|5817331_5819113_-|siderophore-biosynthesis-protein
MSQTQPLDPAAEADRAAVDNLLRCWVRETGVERPADGVLRLELAAAGTAVEAPVRYWSAVGWHRFGTARLPSGAPACATALAALLGVEAAGGDPESVADLTGRVADSVRRVTGFVRARAAVPGDPAGTTPFLAAEQALLTGHPLHPTPKSREGLTEAEGARYSPETRGAFPLHWFAADPAVVSSDSSLGRSAADLLASLAGDAPARPGGTVLVPAHPWQARDAVHRPAVRALLDAGLLHDLGPAGPAWSPTSSVRTVYRADAPVMLKFSLGLRITNSRRENMRAELHRGLAVDRLLTAGLEGALQAAHPGFGIVRDPAWLAVDPAPVGTGHGSGGGEGEGGSGGGGGEDGTGLDVVVRANPFAAGAAPQALCVAGLVAPRPDLPGGRSHLAALVHALAERTGRPVAEAAEEWFTRYTRHVVAPVLWLHAVYGLGLEAHQQNTLVVLDADGLPAGGRYRDNQGYYFSPARSGALYRWVPGVGRDLGTYAADEVIDERLAYYVGVNNLLGVVGALGSQGLADEARLLAVADRFLAGAAAEHGDRLRLASLLRDEPVLRCKANLLTRVRGMDELTGPLEAQSVYVDIANPLVEVRK
>NZ_CP023696.1|WP_078915684.1|5819109_5820531_-|SidA/IucD/PvdA-family-monooxygenase
MTTEQAAGEPPTADLVGVGAGPFNLSLAALADGVPGLDAVFLEQRTAFRWHPGLLIEGATLQVPFLADLVSLVDPTSRWSFLNYVRVRERLFPFYFAERFHIPRAEYDAYCRWVSEELPSLRFGHRADTVRWDARRRVFEVGFTRVDADGAALSTGRIRARHLALGVGTAPHVPAPLRELAADPEVPVLHSADYLAHRERLRAARHVTVVGAGQSGAEVLLDLLRARPEGREGLTWLARTRAFAPMEYSKIGLEHFTPDYTRYFHGLPEAARDRLLPAQWQLYKGVSAGTLSDIHDELYRRALAGGWPDVALTPGVAVTAAERRGGRVRLALEHAEEGSRAVLATDAVVLATGYARRPVDRLLNALGPHLARDGSGRPLVGPDQRLVLGDEVGGAVFVQNAEQHTHGVGTPDLGLAAWRSAVILNALTGRDAYPLPRRTAFTTFGLTGHHRTAPDHAASPSPGRGHDDRKECA
>NZ_CP023696.1|WP_051839572.1|5820527_5822138_-|aspartate-aminotransferase-family-protein
MDTAVAGGAHGAYALGKLTSVVLDALAEGATVRGGPLPGGGPGAVAARLRAACAPVLPEHGTGAEEALRTVVRAVAEGAADPADPWCTAHLHCPPLAVAAAADLAAAALNPSLDSWDQAPAAAVLEQEVTAALAALVYPRAPAPDALITSGGTESNLVALLLARERARAAGAPALRVVCGAGAHHSVRRAAWLLGLPEPVTVACPGGRLDPAALDRALAPLAPHTVPAAAGRPESPAPGGPEACGLRAGRSAYGPSGPAAPGRPAAPVLVVATAGTTDEGLIDPLPELARVAARHGAELHVDAAYGGPLLFSDRLAPLLDGLDSAVSVTFDLHKLGWQPVAAGVLAVSGTDLLAPLALRADYLNADDDGEAGLPDLLGRSLRTTRRPDVLKIAATLRALGRTGLGALVEHCVAAAREFAALVDAHPALRRRPGEPGISTVLFRPAAADTGPPGAGDALVAEVRRLLLAEGRAVVGRAVAEDADGTRRLWLKATLLHPRATGGDLAGLLDLAAAAADRVGAPRAPHLPHAPHTEGPR
>NZ_CP023696.1|WP_037939635.1|5822455_5823796_-|diaminobutyrate--2-oxoglutarate-transaminase-family-protein
MPNGALRAELLARQERRESSARTYASTLPLAPVHAAGAVVTGADGRTYLDCLSGAGTLALGHNHPATVAALTSLLASGAPLHTLDMITPQKDAFSGELLRRLPGGLRDRARLHFCSPAGTDAVEAALKLARHATGRRGVVAFTGAYHGMTLGASAVSGPPRMSGAVGADGVPVTRLPYPYGMRCPFGTGDAERSGELSARLLESLLTDPSSGVGTPAAVILEVVQGEGGVVEGPDRWLREVRRVTEQHGVVLVVDEVQTGVGRTGRFWACERAGVTPDVLVTSKAVGGGLPLALIAYRPELDTWRPGHHTGTFRGNTLAMVAGEIALRTVAEEQLAERALKLGERITRGLREVAACDPGLGEVRGRGLMIGAELVDRDGAPDRYGVPPGDPVRARAVRAACLERGLILELGGRDDTVVRLLPPLVLTDEQADSVVERLAAALESTR
>NZ_CP023696.1|WP_031136241.1|5824219_5824498_+|hypothetical-protein
MRKFGAGVSALAAAALLAVGFTGPAEAAGKLWRAEVQCTKWRIADSSGHGLFKATGTGKTPDAAYKAAIKNANDKMPKGYRAKHCTKKGVKK
>NZ_CP023696.1|WP_031136243.1|5824505_5824862_+|hypothetical-protein
MRTRTLAFGLYADERDAARVAGLVEAQARARGARVVAVTVSDVLPSGEMTAGEAYDFLAEQWADEHPGQDPGARRAVDLRVAVVCSLRTWRAIRKAALRALCPEGNAPHVCRVPWFAG
>NZ_CP023696.1|WP_031136245.1|5825044_5827426_-|glycoside-hydrolase-family-65-protein
MRDWTWEFEGYAPERESLRESLCTLANGYFSTRGALPECAADGTHYPGTYVAGCYDRLVSEVAGRQVENEDLVNLPNWLPVRYRVADGAEPGPWLEPAHEFLTDHVVSLDVRGGVLERRSRYEDDDGRRLAVRQLRLVHMGDPHVAALRTEFTAENWSGALEVEAALDGAVANTGVARYRQLASRHLEDLKTGETADGRVWLSCRTVSSEVRIGLAARTTAPADADVVHAEGRVTQRYLLTLQPGAPVVVDKVVALHTSRDRAISDPLHAAVDRVGRADGFGRLVATHRAAWQQLWRRGELEVPEQAGRILRLHLFHVLQTLSPHTADLDVGVPARGLHGEAYRGHVFWDELFVLPYLNLHFPEVSRALLAYRHRRLGRARAAARDAGRAGAMYPWQSGSDGREEAQRVHLNPRSGHWLPDHSHLQHHVGSAIAYNVWRYWEATGDDEFLHTKGAETLLEIARFWADSAQYDEALDRYRIRGVMGPDEYHDAYPGAAAPGLDDNAYTNVTAAWVLARALQLMAELPEPRRRELEERIGLHHGETALWEEVSRRLYVPFHDGVISQFHGYGELEELDWEGLRHKYGDIRRLDRILEAEGDTVNRYQASKQADVLMLGYLFQPAELRGLLRRLGHVLDDDTWWRTVDYYLRRTSHGSTLSVLVHGWVLARVRRAGAWEFCQEALEADIADVHGGTTGEGIHLGAMAGTLDLVQRGLTGLETRGGTLRLDPVRLPELSEYAFTLRFHGHWGVRLRMTPDSLHVAVPESGVAPIDIALPGTAVSIEPGRSVRLPLPE
>NZ_CP023696.1|WP_051839961.1|5828823_5829777_-|class-A-beta-lactamase
MSSCRREKGSIVDRTTARPNRRAVLATGVGAALAATAAAAGPAHAAPGRGARVEGRLRALERTHDARLGAFAYDTGTGRTVAYRADERFPIASMFKTIAVAAVLRDLDRDGEVLARRVHYTADYVKRSGYSPVTGLPENVANGMTVAELCEATLTRSDNTAANLLLRDLGGPTAVTRFCRSVGDHVTRLDRWEPELNSAEPGRVTDTTSPRAIGRTYGRLILGDLLAAHDRERLTRWMLDNRTSDERFRKGLPADWLLADKTGGGDYGTNNDAGVAWPPGRPPVVLAVQTTRFTPDAEADNVLVAEAARLLAEAMTD

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Crispr_ID: NZ_CP023696_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_20

6012212-6012280

Orphan

Consensus_repeat	Method
GCCGGGGCGGCCGGGACCGGCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_20

>merge|NZ_CP023696|20|6012212-6012280|CRISPRCasFinder
ACAGGGTGGGCCGGGGCGGCCGGGACCGGCGGGACGGCTTGGACGGCCGGTACGGCTCGGGCAGCCGGG

>NZ_CP023696|20|19|6012212-6012280|CRISPRCasFinder
ACAGGGTGGGCCGGGGCGGCCGGG	ACCGGCGGGACGGCTTGGACG
GCCGGTACGGCTCGGGCAGCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031131457.1\|6002077_6003862_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|181133
NZ_CP023696.1\|WP_031130636.1\|6019971_6020712_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP023696.1\|WP_031136781.1\|6005149_6005665_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023696.1\|WP_031136776.1\|6007900_6008347_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|378454
NZ_CP023696.1\|WP_085921645.1\|6004285_6004861_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|224331
NZ_CP023696.1\|WP_031130632.1\|6021563_6021938_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP023696.1\|WP_031130652.1\|6009952_6011128_-\|aspartate/tyrosine/aromatic-aminotransferase	unknown	unknown	gnl\|CDD\|181731
NZ_CP023696.1\|WP_031130630.1\|6021962_6022766_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NZ_CP023696.1\|WP_037937612.1\|6009275_6009788_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031130638.1\|6018535_6019627_-\|adenosine-deaminase	unknown	unknown	gnl\|CDD\|236480
NZ_CP023696.1\|WP_031130640.1\|6017527_6018463_+\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP023696.1\|WP_031130656.1\|6008575_6009139_-\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|213983
NZ_CP023696.1\|WP_031136778.1\|6006127_6007720_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|312032
NZ_CP023696.1\|WP_037937618.1\|6011120_6012008_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP023696.1\|WP_031130644.1\|6013884_6015273_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP023696.1\|WP_031130642.1\|6015293_6017285_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP023696.1\|WP_031136779.1\|6005661_6006075_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|223329
NZ_CP023696.1\|WP_031130646.1\|6013058_6013892_+\|M55-family-metallopeptidase	unknown	unknown	gnl\|CDD\|176450
NZ_CP023696.1\|WP_031130648.1\|6012372_6012837_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023696.1\|WP_031130634.1\|6020846_6021425_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031131457.1\|6002077_6003862_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|181133	PRK07819, PRK07819, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	1.62419e-106
NZ_CP023696.1\|WP_031130636.1\|6019971_6020712_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	2.29224e-22
NZ_CP023696.1\|WP_031136781.1\|6005149_6005665_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.87903e-14
NZ_CP023696.1\|WP_031136776.1\|6007900_6008347_+\|SRPBCC-family-protein	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	1.407e-08
NZ_CP023696.1\|WP_085921645.1\|6004285_6004861_+\|adenylosuccinate-lyase	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	0.0054048
NZ_CP023696.1\|WP_031130632.1\|6021563_6021938_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.00655e-06
NZ_CP023696.1\|WP_031130652.1\|6009952_6011128_-\|aspartate/tyrosine/aromatic-aminotransferase	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP023696.1\|WP_031130630.1\|6021962_6022766_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	2.16009e-32
NZ_CP023696.1\|WP_031130638.1\|6018535_6019627_-\|adenosine-deaminase	gnl\|CDD\|236480	PRK09358, PRK09358, adenosine deaminase; Provisional.	1.09546e-151
NZ_CP023696.1\|WP_031130640.1\|6017527_6018463_+\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	3.25702e-101
NZ_CP023696.1\|WP_031130656.1\|6008575_6009139_-\|hemerythrin-domain-containing-protein	gnl\|CDD\|213983	cd12108, Hr-like, Hemerythrin-like domain. Hemerythrin (Hr) like domains have the same four alpha helix bundle and a similar, but slightly different active site structure than hemerythrin. They are non-heme diiron binding proteins mainly found in bacteria and eukaryotes. Like Hr, they may be involved in oxygen transport or like human FBXL5 (F-box and leucine-rich repeat protein 5), a member of this group, play a role in cellular iron homeostasis.	7.37396e-11
NZ_CP023696.1\|WP_031136778.1\|6006127_6007720_-\|alpha/beta-hydrolase	gnl\|CDD\|312032	pfam08386, Abhydrolase_4, TAP-like protein. This is a family of putative bacterial peptidases and hydrolases that bear similarity to a tripeptidyl aminopeptidase isolated from Streptomyces lividans. A member of this family is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterized from Propionibacterium freudenreichii.	3.59312e-23
NZ_CP023696.1\|WP_037937618.1\|6011120_6012008_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.14439e-07
NZ_CP023696.1\|WP_031130644.1\|6013884_6015273_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP023696.1\|WP_031130642.1\|6015293_6017285_+\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.57368e-56
NZ_CP023696.1\|WP_031136779.1\|6005661_6006075_-\|RidA-family-protein	gnl\|CDD\|223329	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis].	2.44058e-34
NZ_CP023696.1\|WP_031130646.1\|6013058_6013892_+\|M55-family-metallopeptidase	gnl\|CDD\|176450	cd08663, DAP_dppA_1, Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized putative peptidases.	6.0513e-118
NZ_CP023696.1\|WP_031130648.1\|6012372_6012837_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	4.4356e-45
NZ_CP023696.1\|WP_031130634.1\|6020846_6021425_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.48732e-21

>NZ_CP023696.1|WP_037937618.1|6011120_6012008_-|DMT-family-transporter
MAALLLTVSIWAAFALSARALSASTLLPADAALLRFGVPLVVLAPALWRRRRALASVRPGPAAKIVCGAGVPFFLAAMFGGSLTSASFVGAIVPGMVPLFVSALMVARGRGVPRGTQAAGLALIAAGVVALVWRYAVPFDGDVMLGSGTLLVASGLWALYTVGLREVDLDPVGSIGLLCLPSFAVVAVLVAAGVLPTGWAGAAVADVALFLVVQGLGVGLCAGLLYAFAIRRLGAERSSVVGSLSPVAVVLLAIPLLGERPTVAVLVGVPLITTGVVLANRRPRTPREPEVSPDA
>NZ_CP023696.1|WP_031130652.1|6009952_6011128_-|aspartate/tyrosine/aromatic-aminotransferase
MLELLPAPPADPLWDLAAEYGADPRTDRLDLVLGVYRDHNGVTPVMRAVREAEIRLAEVSASKEYRGLSGNPAFNGAMLELVLGGAVPAGRAVAVQTVAGTGALRLLADLVRQTRPGATVWISDPAYVNHRPILQAAGLAVRAYRWTDHQELLADLRGAGRDDVVLLQGCCHNPTGADPTREVWEALADMAARTGWVPFLDLAYHGLGDGLDEDLWAARTLAERLPEVLVAVSCSKNFGLYADRTGCAIVLGSSAPALRHVETALQNAARTLYSMPPEHGAAVVATVLQDAELRGLWRAELDGMRDRIAANRAALVAELEALGLGGWAEPLARQKGMFAGLPLSPEQMTVLRRDHAVYGTATGRVNIAGLPVDKAGRLAAALAAVLEPAGV
>NZ_CP023696.1|WP_037937612.1|6009275_6009788_+|hypothetical-protein
MHPQLAPLVAATAQWLLRAYPPENGAVDRALAEAQARQAVAVAAALRYPTDLDAALVALTGGGGAGRLDWATGAEPDEAPWRSWVDEVLASWAACLLGEPRLAEAAVAAAAATAGHAHAGYRRLLAPGDRDLRAAALLRHPDLLAPVADLHRARLLAALALDPEDPAVPV
>NZ_CP023696.1|WP_031130656.1|6008575_6009139_-|hemerythrin-domain-containing-protein
MGHGGDVITELTTDHREVEELFTRITELPSGDPERKRLADQVTMELVRHSVAEEEYLYPAVREHLAGGDALADKELEDHASAERTMKELEGCKADDPRFDALVTQLMAEIREHVADEEANLLPRLREACPQETLEELGEKVRHAKKTAPTRPHPAAPDKPPANKLLAPGTGMIDRLRDALTGRGKHG
>NZ_CP023696.1|WP_031136776.1|6007900_6008347_+|SRPBCC-family-protein
MAQVEATTERVVAADPETVFDALADYAGTRGTLLPEQFSAYEVREGGDGEGTVVHWRLQATSKRVRDCLLDVTEPTDGQLVEKDRNSSMVTTWTVTPAGQGRSRVVVTTVWNGAGGIGGFFERTFAPKGLGRIYDALLANLAAATEKK
>NZ_CP023696.1|WP_031136778.1|6006127_6007720_-|alpha/beta-hydrolase
MQKRAGTLIAAGALIAGAVGAAPSAAEPPAPKPRTPSLSWTACGTARYPKLECASLRVPLDHADPDGERITLALSRVRHTARTFDGPLLVNPGGPGAGGRDLAGFVAASLPAELAARYDVIGFDPRGTGASRPALTCRPDHFAPVRPDPVPRDAREERRGAARAAAFARACGDAHGRLLPHMGTVAAARDMDAIREALGAPRVNYFGYSYGTYLGAVYAKLYPRRVRRAVLDSVVHPGGVWYDANLAQDHAFDARHKAFLAWVARHDRVYGLGGDPARVEDRWYAMRAALREAPADGRVGAAEVEDTFLPGAYHDGYWPLLAAAFSAYAKEGDAGPLVAAYESLAAPDGSTANAYAGYTAVECRDAPWPRSWGVWHRDMWAAHTKAPFSTWNNAWYNAPCAFWPVPSLTPPDVANAAVPPMLLFQATEDAATPYEGALAAHRLLAGSRLVVERGGGNHAVTLRGNACADRVLVRYLDTGEVPRGDGGDGPDTVCPARPAPVPSAAADPARAAREAPPAVHGALAARAHGG
>NZ_CP023696.1|WP_031136779.1|6005661_6006075_-|RidA-family-protein
MTTHLTRVAAPEGVAPGSGYSHVVWGTGRFVAVSGQCALDADGEVVGEGDPAAQARQVFANLRRCLAAAGAAFDDVVKLTYYVTDVAYLPAVRAARDEALGTTPPPASTAVQVTALFRPELLLEVEAFALVPEGSRP
>NZ_CP023696.1|WP_031136781.1|6005149_6005665_-|GNAT-family-N-acetyltransferase
MTVLVRGMTEADCAAVAGVRVAGWRFAYRGLLPEAYLAAMSPEEGASAHREQLARAGERGAHLVAERAGEVVGWAAFGPDRSPGAGPGDGELYALYVRPDVVGTGVGRALADEVAARAAALGYGRLSLWVLEGNARGRRFYAKAGFAPDGASEPWEVGGATVVEVRYAKGL
>NZ_CP023696.1|WP_085921645.1|6004285_6004861_+|adenylosuccinate-lyase
MDPDFGSLTDRLEGEAGDDPAYRRLLATDDRDELAAVLTAPRMPLWARELAAFRLGTAGDRRAFEALVLLLNHRDPERCVGAAHALTVLGDPRTARAAAALATNELRVAYALVPVRLLTALRAPESVPALVTVLGRRLAPGDPYWRVGVACAEGLGALADPRARPVLEAARPHPRIGPAAATALIRLPATS
>NZ_CP023696.1|WP_031131457.1|6002077_6003862_-|3-hydroxyacyl-CoA-dehydrogenase
MDTPLSTIAVVGLGTMGAGIAEVLARAGREVVGIDVSEAAARRAVAALAASTARSVSRERITEEERRDILARFRTYSDLQAAADADLVIEVVPESYELKQQVVRALDGIVRPTAIIATGTNALSVTRLAADSARPERVLGLHFFNPAPAMKLVEVVSSVLTAPQAVAAVTELAHALGKEPVSVGDRPGFVADGLLFGYLNQAAAMYESKYASREDIDAAMRLGCGLPMGPLALLDLIGVDTARTVLEAMYTESRDRLHAPAPILKQLAEAGLTGRKAGRGFYTYAAPDSAEVVPDALTPPPGGEGGAKPREVRSVGVAGSGTMASGIAEVFAKAGYGVVLAARSQEKADAAKARIATSLARSVDRGRMTPEARDATLERISPAGSLDAFAEVDLAVEAVAEDLAVKRQLFAALDKICKPGAVLATTTSSLPVVACARATSRPQDVIGMHFFNPAPAMKLVEVVRTVLTADDTHATVRAVTARIRKHPVDCGDRAGFIVNALLFPYLNNAVKMVQEHYATLDDIDAAMKLGGGYPMGPFELLDVVGLDVSLAIERVLHEEFREPGLAPAPLLEHLVAAGCLGRKTGRGFREYARR
>NZ_CP023696.1|WP_031130648.1|6012372_6012837_+|Lrp/AsnC-family-transcriptional-regulator
MDDIDLRIIRELQADGRLTNQELADRVRLSPSPCLRRVRRLEEAGLIRGYTAMVDQVAYGLPITVFVRIRLERHTAEAVAVFEEHVALIEHIQDCYLMAGSSDYLLRVVIESLEAYERLVRDRIHAIPGIASIESSFAFGSVKQSRTYPRPASL
>NZ_CP023696.1|WP_031130646.1|6013058_6013892_+|M55-family-metallopeptidase
MKILISADMEGATGVTWPADVLPGTPQWERCRRLFTSDVNAAVLGFLDGGADEVLINEAHWTMRNLLLEELDPRAQMLTGRHKALSMVEGVQRGDVDGIAFVGYHTGAGTEGVLAHTYLANSITGVWLNGVRASEGHLNAHVVAEYGVPVVLVTGDDLTCRDALGYAPEARMVAVKDHVSRYAAVCRTPERTAADIRAAAKEAAGLAVRYEPVRGGPYTVELEFDAEHLAAAATVVPGVAASGERRVAYTSETMYEAIRTFKAVTTIVSAAVEEQYG
>NZ_CP023696.1|WP_031130644.1|6013884_6015273_+|M20/M25/M40-family-metallo-hydrolase
MADRSPLDRKQDREQDRDRYAPDAPGATAFDEVVRFTSDLIRIDTTNRGGGDCQERPAAEYVAERLADAGVEPRLLERTKGRANVVARIEGTDPSADALLVHGHLDVVPAEPDEWTVHPFSGEVRDGVVWGRGAVDMKNMDAMVLAVVRDWARRGVRPRRDIVIAYTADEEASAADGAGFLADRHADLFEGCTEAIGESGAYTFHAGHGMTLYPIGAGERGTSWLELTARGRAGHGSKVNRENAVTRLAAAVARIGEHRWPIRLTTTVRAALTELAALHGIDAPDLDDPEYDVDALLARLGPSATLVEATLRNSANPTMLQAGYKVNVIPGAAGAHVDGRVVPGGEREFEATLDQLTGPDVDWEYVHREVALEAPVGSPTYAALRAAIERFDPDAHVVPFCMSGGTDAKQFSRLGIVGYGFAPLRLPVGFDYQAMFHGVDERVPVDALHFGVRVLDHCLRTV
>NZ_CP023696.1|WP_031130642.1|6015293_6017285_+|S9-family-peptidase
MEPTRPYGTWPSPIDAGLAAAHDGLPEYVGTVGDEVWWTAPRPAEGGRRALVRRTADGTEASVLPPPWNVRSRVNEYGGQPWAGTARGGGAGPLVVFCHFPDQRLYAHEPDGTAPPRPLTPVSATGGGLRWADPVLHPDGTEVWCVLEEYTGEGPGDVRRVIAAVPLDGSAASDRTAIRELTDDRHRFVTGPRLSPDGTRAAWLAWDHPLMPWDGTLLMTGEVVPGGPFASVTPVAGAVDESVCQVDWAPDGSLLYASDRGGWWELYRRAPGATEATALCAGRGEEFGGPLWKVGWRWFRPLDSGLVAVVHGRGTTALGILDPETGELVDAAGPWTEWAPTLAAHGSRVFGVAAGPRGGYEVVELDTGTGRARVVGAAHRDPVDPAYYPEPRRRTFTGPGGREVHAHLYPPHHPGATAPDGELPPYVVWAHGGPTGRSPLVLDLEIAYFTSRGIGVAEVNYGGSTGYGRAYRDRLRGQWGVVDVEDCAAVARALAAEGTADPARLAIRGGSAGGWTAAASLAATDVYACAAVLYPVLDLTAWGTGGETHDFESHYLESLVGPHAEVPGLYEERSPLNRADRISAPFVLLQGLDDLICPPAQSERFLARMAGRGVPHAYLAFEGEEHGFRRAETLVRALEAELALYARAFGLDRADVPELEWRT
>NZ_CP023696.1|WP_031130640.1|6017527_6018463_+|LD-carboxypeptidase
MAPLVPLTRPERLRPGARVAVVSPSGPVLGERLAAGLAVLRGWGLDAVALPHVLDRHPGARYLAGVDEDRARDLQAAWCDPDVDAVVCARGGYGAQRVVDLLDWDAMRAAGPKVFVGFSDATALHEAFALRMGLATLHGPMAGTAGFLEEAATRASLRAALTEPEAARVLGSPTARPLVPGRARGVTVGGCLSLLASNLGTPDGRASLRGGLLLLEDVGEEPYRIDRMLTQLLRAGLLDGLAGVALGSWAECGPYEEVRAVLRDRLGGLGVPVVEELGFGHGAPALTVPLGVPAVLDADAGTLTVEVPALR
>NZ_CP023696.1|WP_031130638.1|6018535_6019627_-|adenosine-deaminase
MHLSDNLASTVSVADWIRRAPKAVLHDHLDGGLRPATIIELARACGYTGLPTEDPAELAVWFRDAADSGSLERYLETFAHTCAVMQTREALVRVAAECAEDLAADGVVYAEVRYAPEQHLAAGLTLDEVVEAVNEGFREGERRTGGRITVGTLLTGMRHTDRSLEIAELTVAHRDRGVCGFDIAGGEIGNPPSRHLPAFQHLKRNNCHFTIHAGEAVGAESIHEAVQVCGAERIGHGVRITDDIAEDGTLGHLAAYVRDNRIALEVCPTSNLQTGAAKDYGSHPIDRLRRLGFRVTLNTDNRLVSGTTMSEEFQHMADAFGYGPEVFEELTVAAVEAAFLPLPERRRIVDEIVRPGYAALRSA
>NZ_CP023696.1|WP_031130636.1|6019971_6020712_-|GntR-family-transcriptional-regulator
MVGTERRRPVVVLYERIVDAIHAGTYPPGSTLPSEPRLASELGVSRPALREALLLLQEDGLLSVRRGVGRTVNDRPPRRGFEYVRPLEELLGAGAPVRVRALLRTVEQPTDFTAQHLLAPVRAELRFWESLLAAEGTAAALSQEWAAPDGVLERVHPAFAAALREAAEGASMLAVLAGASRGVALGAHSAVTATLLGQRRGEQLDRPADTPAVLVTQVVRVGETPVLAAKHMLPTGAPALPVLQSN
>NZ_CP023696.1|WP_031130634.1|6020846_6021425_+|GNAT-family-N-acetyltransferase
MPDAATPRPPYHAEGPRVALRPFRYADAAEFTARARESADLHRPWLFPPDTPAAYASYARALIEDPARFGHLVCERDGGGIAGFVNVNNIVRGSFQCGALGYGAFAHAAGRGLMSEALALVVRHAFGPLALHRLEANIQPGNGASLALVRRAGFRREGYSPAMLHVDGAWRDHERWAITAEMPLPPAGDPVR
>NZ_CP023696.1|WP_031130632.1|6021563_6021938_-|VOC-family-protein
MEILGTTLRVCVDDLEAATAFYERLTGAPALRFERGGVRVAAVGCFLLMSGPDSELEVLRKVTATIAVADVDVAHRTLTEVGARVVAGPVATPVGRNLIAVHPDGSVFEYVDRRTPEADAEGQG
>NZ_CP023696.1|WP_031130630.1|6021962_6022766_-|methyltransferase-domain-containing-protein
MKDAVYTHGHHASVLRSHLWRTAENSAAYLLGALRPGLDLLDVGCGPGTITADLAARVAPGRVTGVDTSAEVLERARAVAAERRVGNAVFAVADVRALGFPDDSFDVVHAHQVLQHVGDPVGALREMRRVCRPGGLVAVRESDFAAFAWYPRVPALAEWLELYRRVARANGGEPDAGRRLLSWARSAGFTDITPGASVWCFATPEERSWWSGLWAERTTRSGYARLAVEGGHTTPERLAAVAEGWRAWGGDADGWFAVPHGEILCRV

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Crispr_ID: NZ_CP023696_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_21

6130899-6131008

Orphan

Consensus_repeat	Method
GCGCGAGTGGACCCGGAGGGGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023696_21

>merge|NZ_CP023696|21|6130899-6131008|CRISPRCasFinder
GCGCGAGTGGACCCGGAGGGGCGCGGGTGCCGGCCTCGGCAGGGAGGCCACCTGTCCCCTGGGAGGGGGCGGCCGCGCACCCGGTGCGCGAGTGGAGCCGGAGGGGCGCG

>NZ_CP023696|21|20|6130899-6131008|CRISPRCasFinder
GCGCGAGTGGACCCGGAGGGGCGCG	GGTGCCGGCCTCGGCAGGGAGGCCACCTGTCCCCTGGGAGGGGGCGGCCGCGCACCCGGT
GCGCGAGTGGAGCCGGAGGGGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031131340.1\|6125540_6126278_+\|phosphocholine-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133014
NZ_CP023696.1\|WP_031131324.1\|6134612_6135671_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_CP023696.1\|WP_031131339.1\|6126265_6127327_+\|iron-containing-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|341453
NZ_CP023696.1\|WP_031131330.1\|6131274_6132216_+\|squalene-synthase-HpnC	unknown	unknown	gnl\|CDD\|274592
NZ_CP023696.1\|WP_031133833.1\|6121726_6122266_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP023696.1\|WP_031131333.1\|6129069_6129999_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_CP023696.1\|WP_031133834.1\|6122262_6123204_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP023696.1\|WP_031131322.1\|6135845_6137972_+\|squalene--hopene-cyclase	unknown	unknown	gnl\|CDD\|239222
NZ_CP023696.1\|WP_031131332.1\|6130003_6130792_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213187
NZ_CP023696.1\|WP_085921243.1\|6123582_6125544_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376450
NZ_CP023696.1\|WP_031131328.1\|6132212_6133163_+\|presqualene-diphosphate-synthase-HpnD	unknown	unknown	gnl\|CDD\|163278
NZ_CP023696.1\|WP_078915579.1\|6139003_6140065_+\|adenosyl-hopene-transferase-HpnH	unknown	unknown	gnl\|CDD\|274595
NZ_CP023696.1\|WP_031131313.1\|6141522_6142134_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP023696.1\|WP_031131319.1\|6138389_6139037_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350170
NZ_CP023696.1\|WP_078915580.1\|6127304_6128084_+\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376450
NZ_CP023696.1\|WP_031131315.1\|6140078_6141464_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|99735
NZ_CP023696.1\|WP_031131326.1\|6133200_6134574_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|274593
NZ_CP023696.1\|WP_031131335.1\|6128089_6128962_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|224137
NZ_CP023696.1\|WP_031131309.1\|6142357_6143170_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP023696.1\|WP_031133832.1\|6120946_6121540_-\|isopentenyl-diphosphate-Delta-isomerase	unknown	unknown	gnl\|CDD\|235156

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031131340.1\|6125540_6126278_+\|phosphocholine-cytidylyltransferase-family-protein	gnl\|CDD\|133014	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP-Cho to either lipoteichoic acid or lipopolysaccharide.	8.98845e-62
NZ_CP023696.1\|WP_031131324.1\|6134612_6135671_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	1.02015e-79
NZ_CP023696.1\|WP_031131339.1\|6126265_6127327_+\|iron-containing-alcohol-dehydrogenase-family-protein	gnl\|CDD\|341453	cd08174, G1PDH-like, Glycerol-1-phosphate dehydrogenase-like. These glycerol-1-phosphate dehydrogenase-like proteins have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH) which plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion.	8.60855e-149
NZ_CP023696.1\|WP_031131330.1\|6131274_6132216_+\|squalene-synthase-HpnC	gnl\|CDD\|274592	TIGR03464, HpnC, squalene synthase HpnC. This family of genes are members of a superfamily (pfam00494) of phytoene and squalene synthases which catalyze the head-t0-head condensation of polyisoprene pyrophosphates. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnD gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.	3.35408e-96
NZ_CP023696.1\|WP_031133833.1\|6121726_6122266_-\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	5.01717e-43
NZ_CP023696.1\|WP_031131333.1\|6129069_6129999_+\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	2.18732e-38
NZ_CP023696.1\|WP_031133834.1\|6122262_6123204_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	7.19549e-92
NZ_CP023696.1\|WP_031131322.1\|6135845_6137972_+\|squalene--hopene-cyclase	gnl\|CDD\|239222	cd02892, SQCY_1, Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.	0
NZ_CP023696.1\|WP_031131332.1\|6130003_6130792_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	4.91185e-93
NZ_CP023696.1\|WP_085921243.1\|6123582_6125544_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|376450	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.	1.15737e-10
NZ_CP023696.1\|WP_031131328.1\|6132212_6133163_+\|presqualene-diphosphate-synthase-HpnD	gnl\|CDD\|163278	TIGR03465, HpnD, squalene synthase HpnD. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. In the organisms Zymomonas mobilis and Bradyrhizobium japonicum these genes have been characterized as squalene synthases (farnesyl-pyrophosphate ligases). Often, these genes appear in tandem with the HpnC gene which appears to have resulted from an ancient gene duplication event. Presumably these proteins form a heteromeric complex, but this has not yet been experimentally demonstrated.	1.06856e-93
NZ_CP023696.1\|WP_078915579.1\|6139003_6140065_+\|adenosyl-hopene-transferase-HpnH	gnl\|CDD\|274595	TIGR03470, HpnH, hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH and running in the same convergent direction is IspH (ZM0875, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase), an essential enzyme of IPP biosynthesis and therefore essential for the biosynthesis of hopanoids. One of the well-described hopanoid intermediates is bacteriohopanetetrol. In the conversion from hopene several reactions must occur in the side chain for which a radical mechanism might be reasonable. These include the four (presumably anaerobic) hydroxylations and a methyl shift.	0
NZ_CP023696.1\|WP_031131313.1\|6141522_6142134_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.21524e-21
NZ_CP023696.1\|WP_031131319.1\|6138389_6139037_+\|hypothetical-protein	gnl\|CDD\|350170	cd17877, NP_MTAN-like, nucleoside phosphorylases similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs), as well as futalosine nucleosidase and adenosylhopane nucleosidase. Bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	2.58646e-24
NZ_CP023696.1\|WP_078915580.1\|6127304_6128084_+\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|376450	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.	6.1982e-07
NZ_CP023696.1\|WP_031131315.1\|6140078_6141464_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|99735	cd00610, OAT_like, Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.	1.21487e-136
NZ_CP023696.1\|WP_031131326.1\|6133200_6134574_+\|NAD(P)-binding-protein	gnl\|CDD\|274593	TIGR03467, HpnE, squalene-associated FAD-dependent desaturase. The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.	2.06176e-127
NZ_CP023696.1\|WP_031131335.1\|6128089_6128962_+\|glycosyltransferase	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	6.50151e-23
NZ_CP023696.1\|WP_031131309.1\|6142357_6143170_-\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	5.13368e-82
NZ_CP023696.1\|WP_031133832.1\|6120946_6121540_-\|isopentenyl-diphosphate-Delta-isomerase	gnl\|CDD\|235156	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase.	1.50045e-85

>NZ_CP023696.1|WP_031131332.1|6130003_6130792_+|ABC-transporter-ATP-binding-protein
MDGARPAGPRIPTVIADDVHIVYRVNGGSAGKGSATAALSRILRRDKGESRGVRKVHAVRGVSFTAYRGEAIGLIGTNGSGKSTLLRAIAGLLPTERGRVYTDGQPSLLGVNAALMGDLTGERNVILGGLAMGMSREEIRERYQSIVDFSGINEKGDFITLPMRTYSSGMGARLRFAIAAAKDHDVLMIDEALATGDRKFQIRSEERIRELRKEAGTVFLVSHSNKSIRDTCDRVLWLEKGELLMDGPTDEVLRAYEKETGR
>NZ_CP023696.1|WP_031131333.1|6129069_6129999_+|ABC-transporter-permease
MSETTHDRPVAVSVPPSPDDGLTPAELAAKYGLSVSGARPGLGEYVRQLWGRRHFILTFSRAKLTAQYSQARLGQLWQVATPLLNAAVYFAIFGLILEAGRGMDKKVYVPFLVTGVFVFMFTQTSVMSGVKSISGNLGLVRALHFPRAALPISFALQQLQQLLYSMLVLFVIVAIFGSYPSLAWLLIVPALALQFTFNTGLAMIMARMGSKTPDLAQLMPFIMRTWMYASGVMFSIPIMLKDKPAWIADVLMYNPAAIYMDLIRFALIDGYTSENLPDHVWLAAVLWAVVVGVAGFVYFWKAEERYGRG
>NZ_CP023696.1|WP_031131335.1|6128089_6128962_+|glycosyltransferase
MKLGAVIITMGDRPDDLNALIESVARQEGEPVEVVVVGNGAPVRGVPGWVRTVDLPENLGIPGGRNVGIEAFGPNGSDVDVLLFLDDDGLLPRKDTAELIRRAFADDPELGIVSFRIADPETGATQRRHVPRLRASDPMRSSRVTTFLGGASAVRTKVVEQVGPLPGEFFYAHEETDLAWRALDAGWMIDYRADMVLHHPTTAPSRHAVYHRMVARNRVWLARRNLPAPLVPVYVGVWLLLTLLRRPSGPALKAWFGGFREGWTTPCGPRRPMRWRTVWRLTRLGRPPVI
>NZ_CP023696.1|WP_078915580.1|6127304_6128084_+|CDP-alcohol-phosphatidyltransferase-family-protein
MQKPSVAELRPVVHPPGVKDRRSGEHWGGRLYMREVSLRVTRHLVTTKVTPNQLTYVMTVAGVLAAPALLVPGIPGALLGVLMVQLYLLLDCVDGEVARWKKQFSLGGVYLDRVGAYLCDAAVLVGFGLRAADLWGSGRIDWLWAFLGTLAALGAVLIKAETDLVAVARHQGGLPPVKESASEPRSSGIALARRAAAAVKFHRLVLGIEASLLILVLAVADTIRGDLFFSRLGVAVLAGIALLQTVLHLVSILASSRLR
>NZ_CP023696.1|WP_031131339.1|6126265_6127327_+|iron-containing-alcohol-dehydrogenase-family-protein
MPVLTRLIPSPVVVDIGGGAMDKLGGLLADQRISASGKLAMAVSNGSGRALREKLEPLLPDAHWYTVEDGTIDSAVRLADAIRGKRYDAVVGVGGGKIIDVTKYAAARVGLPMVAVATNLSHDGICSPVSTLDNDNGRGSYGVPSPIAMVIDLDVIRDAPQRFVRSGIGDALSNISAIADWELSRRVNGEPVDGLAAAMARTAGESVLRHPGGVGDDEFLVVLAEALVLTGIAMSISGDTRPASGACHEISHAFDLLHPRRAALHGEQVGLGAAFAMHLRGARDEAGLFAEVLRRHGMPVLPEDIGFTPGEFVAAVEYAPQTRPGRFTILEHLDLSTDQIRDAYADYAKTIGS
>NZ_CP023696.1|WP_031131340.1|6125540_6126278_+|phosphocholine-cytidylyltransferase-family-protein
MIGLVLAAGAGRRLRPYTDTLPKALVPVDGDTTVLDLTLANFAEVGLTEAAIVVGYRKEAVYERRAALEAKYGIKLTLVDNDKAEEWNNAYSLWCARDVLGEGVILANGDTVHPVSVEHTLLAARGGDKRIILALDTVKSLADEEMKVVAEDGLGVRRITKLMDPATATGEYIGVTLIEPGAAADLADALKATFERDPDLYYEDGYQELVHRGFRIDVAPIGDVRWVEIDNHDDLAKGREIACLY
>NZ_CP023696.1|WP_085921243.1|6123582_6125544_+|CDP-alcohol-phosphatidyltransferase-family-protein
MSTAILTGPPVPGSPLEGDLRSLGFEVRTAADPRETAALLAAVPAGERVAVVDPRFVGHRHALRLALTDPRFPAGAAPGALTARPEARQGLTRALAALAADGDPAAAPAAPAPSSTPGGPAETASPEGAASAAESAAPAEAPAPSAPAATLPDRPAAPAATLPDALAAALEDEGVAVHRPELGSLVAAVPVGPQARKETRDAVAAVDDEAVRLRSAVKSRDGFFTTFFISPYSRYLARWCARRGLTPNQVTTASLVTALVAAGCAATGTRGGFVAAGLLLLFSFVLDCTDGQLARYSLQYSTLGAWLDATFDRAKEYAYYAGLALGAARGGDDVWALALGAMVLQTCRHVVDFSFNEANHDATANTSPTATLSDRLDGVGWTVWARRMIVLPIGERWAMIAVLTALTTPRVVFSALLIGCSFAALYTTAGRVLRSLTRKASRTDRAARALADLADNGALAQAAAKVLRPVARPLGGRTPYALAGAAVLLAAAAAAPLDGPLVVLAAVLYAVASGAAVARPLKGALDWLVPPALRAAEYGTVLALAARADAPGALPAAFGLVAAVAYHHYDTVYRIRGDAGAPPAWLVRALGGQEGRTLLAAVLAALLATGGGDGFPLALTALAGAVALLGLAESIRFWVSSGAPAVHDEGEPA
>NZ_CP023696.1|WP_031133834.1|6122262_6123204_-|cation-transporter
MGAGHNHGHTHGGPPPPGTAGAAHRWRLRVALTITLSVMVVEIVGGVLADSLALIADATHMATDAVGLGMALLAIHMANRPATAKRTYGYARAEILAALANCLLLLGAGGYVLFEAVQRFMAPAETKGGLTIVFALVGLVANMVSLSLLVRGQKESLNVRGAYLEVLADALGSVTVLVAAGVILATGWQAADPIASLVIAVMIVPRTVRLLRETLDVLLEAAPKGVDMTEVRRHMLALPGVEDVHDLHAWTITSGMPVLSAHVVVEASALEGPGHEKTLHALQECLVGHFDVEHCTFQLEPSGHAAHEAGLCH
>NZ_CP023696.1|WP_031133833.1|6121726_6122266_-|N-acetyltransferase
MTPRPTAPSPRPGWRTRPEADADRAAVRAVNAAAFDTTAEADLVDALRADPDAWLPGLSYVAEAPDGSVAAYALITRCRVGDAPAAALAPVAVAPGHQRRGAGQAVVRAVLDAARRAGEPLVLVLGHPAYYPRFGFVPASRYGIRPSFEVPDEAMMALPLADGGVVPAGTITYPPAFGV
>NZ_CP023696.1|WP_031133832.1|6120946_6121540_-|isopentenyl-diphosphate-Delta-isomerase
MPTTPATAANSAPNGAAPSIMLELVDEDGTTIGTAEKLSAHRAPGRLHRAFSVFLFDEEGRLLLQRRALGKYHSPGVWSNTCCGHPYPGEAPFTAAARRVSEELGVSPSLMAEAGTVRYNHPDPVSGLVEQEFNHLFVGMVQAPPRPDPDEVGETAFVTARELAERHASAPFSAWFMTVLDAARPAIRELTGTAGGW
>NZ_CP023696.1|WP_031131330.1|6131274_6132216_+|squalene-synthase-HpnC
MTPDAPARTTLDKAADENFPVAPFFLPRAWRADLMAVYGFARLVDDIGDGDLAPGGADARLLGARPGDGPHALLDALETDLSRVFDDAPATPAAPATPAAPGASEAPAHPLLAALRPTVRRHALGPAPFRALIEANRQDQRVRRYATHDDLLAYCELSANPVGRLVLAISGTSTPERIRHSDRICTALQIVEHLQDVAEDLRRDRIYLPAEDMARFHVTEADLAAPTANASVRALVAYEARRARDLLDEGAPLVRSVQGRLRLLLTGFVAGGHAALDALRAARYDVLPGPPRASGHRLLRRAGAVWRAARGEG
>NZ_CP023696.1|WP_031131328.1|6132212_6133163_+|presqualene-diphosphate-synthase-HpnD
MSRTVDTTTPTPPPVEAAYRYCEAVTAGQARNFAYGIRLLPTAKRQAMSALYAFSRRVDDIGDGTLGPDAKRRRLETARDTLDRVRRGAVAEDDTDPVAVALADSARRFPLPLGGLDELIDGVLMDVRGRTYETWDDLRTYCRCVAGAIGRLSLGVFGTAGGAPGADRAPHYADTLGLALQLTNILRDLREDAANGRSYLPAEELDKFGCSGGFHSATPPPGADFTGLVHHEVRRARALFAEGYRLLPLLDRRSGACVAAMAGIYRRLLDRIERDPLAVLRGRVSLPGAEKAYVAVRGLSGLDTRTVTRRTERTRP
>NZ_CP023696.1|WP_031131326.1|6133200_6134574_+|NAD(P)-binding-protein
MTGRHAVVVGGGLAGVTAALRLADAGVRVTLLEGRPRLGGLAFSFRRGDLTVDNGQHVYLRCCAAYRWFLDRVGGADLAPVQDRLDVPVLDVGGPRGPRLGRLRRTALPVPLHLAASLAAYPHLSVAERLAAGRAALALRSLDPADPALDDADFAGWLARHGQSRRAVQALWDLVGVATLNATAAQTSLGLAAMVFRTGLLSAPGAADIGWARVPLGHLHDTLAREALEARGVRVLVRTRVSAVTPADGGRWVVDVPGDSLDADTVVLAVPQRETHDLLPPGALDTPGDLLRIGTAPILNVHVLYDRPVLRRPFFAALGSPVQWVFDRTEASGMSGPGQYLAVSQSAAQAEIDAPVAELRARYLPELERLLPPARHARVTDFFVTRERTATFAPAPGVARLRPGARTRLPGLYLAGAWTATGWPATMEGAVRSGFTAAAAALSALGRPHVHPLEEAA
>NZ_CP023696.1|WP_031131324.1|6134612_6135671_+|polyprenyl-synthetase-family-protein
MPPANPAVDAAEVAALLDRGRTLSTPVLRAAVDRLAKPMDTVAAYHFGWIDALGRPADGDGGKAVRPALALLSAEAAGAPPETGIPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALAGEVLLELGTVEAGRATRRLTVATRKLIDGQAQDISYEHRERVTVEECLEMEGNKTGALLACSASIGAVLGGADDATADALEAYGHHLGLAFQAVDDLLGIWGDPEATGKQTWSDLRQRKKSLPVVAALAAGGPASERLGELLTADAKSQDLDAFSEEEFATRAALIEEAGGRDWTAQEARRQHAVAIGALDRVDMPPRVRAQLTALADFVVVRKR
>NZ_CP023696.1|WP_031131322.1|6135845_6137972_+|squalene--hopene-cyclase
MTATTDGSAGSTGPAPAPADELHRTSGGSTATATATAEPATAVPPAEPAPAAAHAAQATALTGPAAPAAPAPAPSGADLLAAAETAMRRSVDHLLARQDAEGWWKGDLETNVTMDAEDLLLRQFLGIRDDATTEAAALFIRGEQRGDGTWATFHGGPGDLNATVEAYVALRLAGDPPDAPHMARAAAWVRERGGIAATRVFTRIWLALFGWWKWDDLPELPPEMIYLPPWFPLNIHDFGQWARQTIVPLTIVSAKRPVRPAPFALDELHTDPRRPCPPRPLAPAGTWDGLFQRLDRALRHYRRFAPRPLRRAAMNAAARWIVERQENDGCWGGIQPPAVYSLIALHLLGYDLGHPVMRAGLASLDRFAVHREDGARMVEACQSPVWDTCLAAIALADAGLPPDHPALVRAADWLLAEQVVRPGDWAVRRPGLPPGGWAFEFHNDTYPDIDDTAEVLLALRRVRHPDPARVDAAVRRGVRWTLGMQSGDGAWGAFDADNTSRLPNRLPFCDFGEVVDPPSADVTAHVVEMLAHEGLAADPRTRRGVAWLLAEQEPRGSWFGRWGVNHVYGTGSVVPALTAAGLPRSHPAIRRAAAWLVSVQNEDGGWGEDLRSYREEEWIGRGASTASQTAWALLALLAAGERESAAVARGVAWLAATQRADGSWDEPYFTGTGFPWDFSINYHLYRQVFPLTALGRYVHGEPAVGKGR
>NZ_CP023696.1|WP_031131319.1|6138389_6139037_+|hypothetical-protein
MRPPEALLVACALGIEHLALRSSRAAGPGAGAGAGPVTLLRTGMGPEQARRAVSAALRSEPLRTAAVIASGFCAGLAPGMHPGDLVVADETRGPHGTTPCTATDALVAALARALPGRTVHTGPLTGSDHVVRGPERAALRATGALAVDMESAATLHAALAAGPRPVAAVRVVVDAPEHELVRIGTVRGGISAFRVLRAVLPAFLEWHRSLLLPRR
>NZ_CP023696.1|WP_078915579.1|6139003_6140065_+|adenosyl-hopene-transferase-HpnH
MAPFLAAPQEVSQMAMPLRQTVRVGTYLLRQKLRGREKFPLIVELEPLYACNLACEGCGKIQHPAGVLKQRMPVAQAVGAVLESGAPMVSIAGGEPLMHPRIAEITRQLVARRKYVFLCTNALLLRKKLHEFTPSRYFAFAVHIDGLRERHDESVAKEGVFDEAVAAIKEAQRRGFRVTTNSTFFNTDTPQTVIEVLDYLNDDLRVDEMMISPAYAYEKAPDQEHFLGVEQTRELFRKAFAGGNRRRWRLNHSPLFLDFLEGRADFPCTAWAIPNYSLFGWQRPCYLMSDGYVPTYRELVEETDWDKYGRGKDPRCANCMAHCGYEPTAVLATMGSLRESLRAAREAVPARRA
>NZ_CP023696.1|WP_031131315.1|6140078_6141464_+|aspartate-aminotransferase-family-protein
MTTDFDLGKLLADRASERYELHARHLNHQLPRMLHTIGFDKVYERAEGARFWDAEGNEYLDMLAGFGVMGLGRHHPVVRRALHDVLDLDLPDLTRFDCAPLPGLLAERLLAHSPHLDRVYFGNSGAEAVETALKFARRATGRPRVLYCAHAFHGLTTGALSVNGEDCFRDGFAPLLPDTAVELGDLDALDRELRRGDVAALIVEPIQGKGVHEAPPGFLRAAQELLHKRGALLVADEVQTGLGRTGDFYAYQHEEGVEPDLVCVAKALSGGYVPVSATIGKDWIFKKVYSSMDRVVVHSASFGANAQAMAAGLAVLAVLEDEDVVGNARRTGALLKSRLAALTDRYEMLREVRGRGLMIGIEFGRPSSLGLRGRWTMLQTARRGLFAQMVVVPLLQRHRILTQVSGDRLEVIKLIPPLVIGEADVDRFVTAFTDVMDEAHSGGGLIWDFGRTLVKQAVANR
>NZ_CP023696.1|WP_031131313.1|6141522_6142134_+|helix-turn-helix-transcriptional-regulator
MTSVEGEPADGLPDVAPRLRALRRRRGLTLEAAARRAGLSPAHLSRLETGRRQPSLPMLLGLARAYGTTVSELLGEAAPATDPVVRSGRAEPVEAGGWTYHQAGAAGRAMQALRVDVPYTGLHDAVRVHPGEEWLYVLAGRVRLTLGESAHVLDPGDSAHFDSLTPHRIASATRSGAELLFVHTLVQSSAADLCLGGGPAQHH
>NZ_CP023696.1|WP_031131309.1|6142357_6143170_-|tyrosine-protein-phosphatase
MTQQLPPMPSTAEPELSGVRNFRDVGGLPTVDGRRVRPGVLFRSGHLAHATEEDAAFLASLGLHTVFDFRNAADQALEGPDVELPGVRNVNIPLTDPADGAEFWAMVRNGDLDQLRELLGDGRAAARMRAAYRSIITERTAEHSRVLHAVASDSVPTLMHCAAGKDRAGLSIAVVLLALGVEREAIEADYLKSNDPHRRYRVRRSDSSPAGMSAEVMELLSPLFDARGEYLHTAYATIEEHWGSTERYLADGLGLAGDTRERLRARLLDG

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Crispr_ID: NZ_CP023696_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023696_22

6284689-6284950

Orphan

Consensus_repeat	Method
CNNGGCCGTACCGGCCGCA	CRT

5 spacers

The CRISPR arrays of NZ_CP023696_22

>merge|NZ_CP023696|22|6284689-6284950|CRT
CGAGGCCGCACCGGCCGCATCGCCCCCGGGCCGTACCGGCCGCCTGACGCCCGGGCCGTACCGGCCGCAAAGCGTGTCCCCGGCGTGCCCGGCAGGGTCGTACCGGCCGCATCGCCCCCGGGCCGTACCGGCCGCCTGACGCCCGGGCCGTACCGGCCGCACGGCGTGTCCCCGGCGTGCCCAGCAGGCCGTACCGGCCGCATCGCCCGCGAGGCCCCCGGCAGCGGGGGGGGCGTGCCCCCACGGGGCCGTACCGGCCGGG

>NZ_CP023696|22|2|6284689-6284950|CRT
CGAGGCCGCACCGGCCGCA	TCGCCCCCGGGCCGTACCGGCCGCCTGACGC
CCGGGCCGTACCGGCCGCA	AAGCGTGTCCCCGGCGTGCCCGG
CAGGGTCGTACCGGCCGCA	TCGCCCCCGGGCCGTACCGGCCGCCTGACGC
CCGGGCCGTACCGGCCGCA	CGGCGTGTCCCCGGCGTGCCCA
GCAGGCCGTACCGGCCGCA	TCGCCCGCGAGGCCCCCGGCAGCGGGGGGGGCGTGCCCCCA
CGGGGCCGTACCGGCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023696.1\|WP_031129608.1\|6288626_6291305_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223972
NZ_CP023696.1\|WP_031129610.1\|6292726_6293269_-\|flavodoxin	unknown	unknown	gnl\|CDD\|372273
NZ_CP023696.1\|WP_051839120.1\|6273417_6273693_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_031129616.1\|6297399_6298044_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_CP023696.1\|WP_078915422.1\|6294588_6295605_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP023696.1\|WP_031129595.1\|6273689_6274097_-\|DUF1622-domain-containing-protein	unknown	unknown	gnl\|CDD\|377914
NZ_CP023696.1\|WP_031129600.1\|6277686_6278730_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NZ_CP023696.1\|WP_031129591.1\|6271948_6273007_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|176192
NZ_CP023696.1\|WP_037937051.1\|6296759_6296966_+\|DUF1918-domain-containing-protein	unknown	unknown	gnl\|CDD\|378101
NZ_CP023696.1\|WP_078915423.1\|6295601_6296528_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP023696.1\|WP_078915421.1\|6291552_6292452_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP023696.1\|WP_031129606.1\|6285118_6286189_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176246
NZ_CP023696.1\|WP_051839122.1\|6275070_6275934_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
NZ_CP023696.1\|WP_031129602.1\|6278868_6279306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023696.1\|WP_078915424.1\|6280095_6282936_-\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|225918
NZ_CP023696.1\|WP_031129611.1\|6293402_6294071_-\|DUF4389-domain-containing-protein	unknown	unknown	gnl\|CDD\|379561
NZ_CP023696.1\|WP_051839121.1\|6274274_6274844_-\|gluconokinase	unknown	unknown	gnl\|CDD\|225804
NZ_CP023696.1\|WP_078915425.1\|6286712_6288530_+\|GAF-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP023696.1\|WP_085921626.1\|6276392_6277652_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP023696.1\|WP_031129603.1\|6279602_6279920_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956

Protein	Function_ID	Function_description	E-value
NZ_CP023696.1\|WP_031129608.1\|6288626_6291305_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	2.69426e-115
NZ_CP023696.1\|WP_031129610.1\|6292726_6293269_-\|flavodoxin	gnl\|CDD\|372273	pfam12724, Flavodoxin_5, Flavodoxin domain. This is a family of flavodoxins. Flavodoxins are electron transfer proteins that carry a molecule of non-covalently bound FMN.	9.43584e-30
NZ_CP023696.1\|WP_031129616.1\|6297399_6298044_-\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	6.24319e-37
NZ_CP023696.1\|WP_078915422.1\|6294588_6295605_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	7.29833e-15
NZ_CP023696.1\|WP_031129595.1\|6273689_6274097_-\|DUF1622-domain-containing-protein	gnl\|CDD\|377914	pfam07784, DUF1622, Protein of unknown function (DUF1622). This is a family of 14 highly conserved sequences, from hypothetical proteins expressed by both bacterial and archaeal species.	1.73169e-30
NZ_CP023696.1\|WP_031129600.1\|6277686_6278730_-\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	9.11914e-148
NZ_CP023696.1\|WP_031129591.1\|6271948_6273007_-\|glucose-1-dehydrogenase	gnl\|CDD\|176192	cd08230, glucose_DH, Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	2.24978e-137
NZ_CP023696.1\|WP_037937051.1\|6296759_6296966_+\|DUF1918-domain-containing-protein	gnl\|CDD\|378101	pfam08940, DUF1918, Domain of unknown function (DUF1918). This domain, found in various hypothetical bacterial proteins, has no known function.	2.1799e-22
NZ_CP023696.1\|WP_078915423.1\|6295601_6296528_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	2.26783e-17
NZ_CP023696.1\|WP_078915421.1\|6291552_6292452_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	9.54564e-20
NZ_CP023696.1\|WP_031129606.1\|6285118_6286189_+\|zinc-dependent-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176246	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_CP023696.1\|WP_051839122.1\|6275070_6275934_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	1.87307e-37
NZ_CP023696.1\|WP_031129603.1\|6279602_6279920_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	3.85831e-05
NZ_CP023696.1\|WP_078915424.1\|6280095_6282936_-\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|225918	COG3383, COG3383, Uncharacterized anaerobic dehydrogenase [General function prediction only].	0
NZ_CP023696.1\|WP_031129611.1\|6293402_6294071_-\|DUF4389-domain-containing-protein	gnl\|CDD\|379561	pfam14333, DUF4389, Domain of unknown function (DUF4389). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 104 and 223 amino acids in length. There is a single completely conserved residue R that may be functionally important.	3.27632e-11
NZ_CP023696.1\|WP_051839121.1\|6274274_6274844_-\|gluconokinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	9.34345e-71
NZ_CP023696.1\|WP_085921626.1\|6276392_6277652_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.14393e-32
NZ_CP023696.1\|WP_078915425.1\|6286712_6288530_+\|GAF-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	3.13591e-32

>NZ_CP023696.1|WP_078915424.1|6280095_6282936_-|formate-dehydrogenase-subunit-alpha
MTGDAGGAPDGTPADAPGTPDGTPADAPGDSPDGDSAGPPAGTPADAPDAPGGRLHVEVDGAAVAVPAGASLLAAVRAAGAELPALCSDDRFGPAGSCRTCLVRAGGRIAAACVTPAVSGARVDTAAADLVRLRREAVEVIASVLPPRALAGDNPSELARVCRSLGVGPDAARGTGGRGRDDSHPYVHLDRDLCIACGRCVRMCAEVQGTFALTLVGRGADTQVAPGTGGPWAESDCVACGGCVDTCPTGAITQPGPAAGLTSAYAPPTATRTTCGYCGVGCALDVVADGGRVTAVLPARDGPVNDGHACVKGRFAHGFLTSPERLTRPLVRRGGRLEPAGWDEALERVARGLRAAVAAGGPDAVAAVSSARATNEENYLVQKFMRVVVGTNNVDNCSRLCHSPSAAGLTASFGLPGGTDSFDGVERADCLFVVGANPVEAHPVVGARLLRRALEGAALVVADPRAVGLAVHADLHLRPRPGTNVALFHGIAHVLLTEGLADTAFLRARATGLPELTELLAGYPPERVQDITGVPAGDVVAAARLYGRAERPAIVYGLGVTEHRHGTDGVRTLANLAILRGAVGTDRGYGVNPLRGQNNVQGASDMGALPDVLPGYAKVSDPSARAVAEAVWGAPVPPRPGLRLPGMFAAARAGTLKALWVIGEDVRATDPDANRVARALDACPFVVCSELFPSETARHADVVLPAAAWLEKEGTFVNFDRRFQRVRRAVPPPGEARSDFDIVRSLARVMGADLGCATPADALAECARLAAPLFGGLSHARIDREGAVPWPCPDPGAPGEAKLYGRGFATPDGRAHLAAAPYLPPGEAPDDGYPLVLVTGRRWAHYNSGSMTRRGDGLALGPADFLDVHPEDADRYGLRDGAPVVVESRHGRARLVARIGEETAPGQVFCAFHFPASGVNRLTSHHADTVTSCPEYKVTAVRVSAP
>NZ_CP023696.1|WP_031129603.1|6279602_6279920_+|MarR-family-transcriptional-regulator
MTSVPPTRGDQWTFLTNHARVLLHIARDPDVRLRDVAASVGITERAVQLIVGDLEAAGYLTRTRVGRRNRYTIDPTVALRHPAEADHPVGDLLGAFLHREDAPAP
>NZ_CP023696.1|WP_031129602.1|6278868_6279306_-|hypothetical-protein
MLADSVRDVAVIDTAVRLAGPRRAPLLIVVALPQHPHPPPTPEADEYAARLVMARVLPRVRRSGLAYLPVTHRGTGGGTRLRAAGGVLDVVARHRSPVVVAATGGPPRLDARTLAEAAALRGAPFVHAVTPAGWVPPPLRLAPAG
>NZ_CP023696.1|WP_031129600.1|6277686_6278730_-|TerC-family-protein
MDSVSFAVPLWVWGAVTAGIAVMLAVDLIAHRDSHVIGFREAAWWSALWIAIGLGFGLILLVWQGGETASTYYAGYLIEKALSIDNVFVFALVFSFFAVPDAYQHKVLFWGVIGALGARLVFIFVGVELLEVFFWTAYVFGAFLIYTGWKMAVSKDAEVHPDRNPVVRVVRRIIPTDSAYHGDRFFIRVDGRRVATLLFVALVAIEATDLVFAVDSVAAVLAITTNTFLVWTANAFAVLGLRSLYFCLAGLLRRFAYLHYGLAVLLAFAGVKLILSETPVGKLPIPLTLGFIAVTITVSIVWSLLATRGAPPGGDGRPAEPAGQGGTSGTTPPATAPRPAPRDEDTP
>NZ_CP023696.1|WP_085921626.1|6276392_6277652_+|MFS-transporter
MTRTTTAAAGISPRPEVQRRILTVLVAGQILSGAGLAAGVTVGALLAQDMLGSTSLAGLPSALFTAGSALAAVAVGRVSQARGRRPGLAAGYLTGAVGSAGVLAAAVLGRPVLLFVALFVYGAGTATNLQARYAGADLAAPAHRGRAVSTVLVATTVGGVAGPNLAAPTGHLAEALGIPHLAGPFILAGLAYALAALVLAVWLRPDPLLLARTLAEEEEAAAAAGAAAADPADLPEGRGGVALGGLVMVLSQLVMVAIMTMTPVHMHGHGHGTAASGLVIAVHIGAMYLPSPLTGRLVDRHGRLKVAAASGLTLLASGTVAALAPGDSVPLLALALALLGLGWNFGLVAGTAIITDNVPLATRARTQGLVDVAVAVAGATGGMASGIVVAATGYPVLALAGGVLSLALLPVVAAARRRP
>NZ_CP023696.1|WP_051839122.1|6275070_6275934_+|rhomboid-family-intramembrane-serine-protease
MVIPVHDVNPSRRTPWVTYVLIAVNVAVFLRTPGMAGSLAGEGGLAQWCRLESFLDQWAAVPRELIQGRLPELVPTGQTGVGPAGPGCVVAPPDYEKSPPLSALTAMFLHGGWLHLLGNMLFLWVFGDNVEDRLGKVRYLLFYVLCGYAATYGFALVDPDSATPLIGASGAVAGVLGAYLVLYPKVRVWVLVPFLIMLPLRLPAWSVLGLWFVLQAVYSYGAGVSQAGSVAYLAHVVGFAVGMLCAWPLRRGTPPPPEPGGALWGRDARPGPVWPGYPPDRRPGPGR
>NZ_CP023696.1|WP_051839121.1|6274274_6274844_-|gluconokinase
MPDRARPLVVVTGVSGSGKSTVGRALAGRLGVPYEEGDDLHPPENIAKMEAGAPLTDRDREPWLDRVAAWLGGRLQDGGGGVVACSGLKRRYRDRLAAVSPRVFFVHLHGPVELIAGRMAARRGHFMPPALLRSQVAALEPLAPDEHGAAVSVEGTPEETVALALRAVRQRHSPGAAGEGRGPGPEAPE
>NZ_CP023696.1|WP_031129595.1|6273689_6274097_-|DUF1622-domain-containing-protein
MSVELLPESTLSDVIGLMVRLVEFAGALVIFLGAAWAFVQFAKAGLKGRGRVAGFNRIRLSLGRFLVLGLEFQLAGDVLRTAVAPSFTEIGQLAAIAAIRTALNYFLGREIAQERAELARGEAPEGRRPAEGMPT
>NZ_CP023696.1|WP_051839120.1|6273417_6273693_-|hypothetical-protein
MIPWAQGAALLVTAAGLVAAPAAYRMVGDARRALAVLLDFLTAAGLVRLSGDLSWNGVLTAAAVIALRHLITFGLTPSRSGSAPGARPWVR
>NZ_CP023696.1|WP_031129591.1|6271948_6273007_-|glucose-1-dehydrogenase
MRALTVRPGPEPSTEVRELGTPVPADAELLVRGVALGVCGTDREIAGGHYGTPPAGRDWMVAGHESLGRVEEAPPGSGFSPGDLVVGVVRRPDPEPCGACARGLFDMCRNGRYRERGIKELDGYGAGYWTVEHDYAVALDPRLEPVGTLLEPASVVAKAWQQVDLVGARSWFEPRRVVVTGAGPIGLLAALIGVERGLETHVLDRVERGPKPALVRALGAEYHSGDAEDVLDAVRPDVVIEATGAARVVFAAVSGTRPYGVVCLTGVSPAGRHITVDAGAANRGLVLENDVVVGSVNANVDHYRQAAAVLARADGAWLERLITRRVPLEGYREALDAREDDVKVVITLDGAG
>NZ_CP023696.1|WP_031129606.1|6285118_6286189_+|zinc-dependent-alcohol-dehydrogenase-family-protein
MKALVFEGPGRTSWQDVPDPGIKDAADAVVRVDAVTICGTDLHIVKGDVPEVAPGTVLGHEAVGEVVEVGGDVRTVRPGDRVLVSCIAACGRCRFCRENRYGQCRGGGGWTLGHLIDGTQAEYVRVPFADLSVHPLPAGVTSEDAVLLADIFPTAYEVGVLNGRVGPGDTVVVVGAGPIGLAVVATAKLYSPGRIIAVDLAESRLEAARNVGADATVSAAEDPEALVADLTDGIGADVVVEAVGVPEAFEQCTRMVRPGGRVANVGVHGRPATLHLEDLWSKDVTITTGLVDTHSTPLLLRMMAAGRLPAASAMVTHRFELGQMEEAYDVFSRAAVTGALKVVLGGPRHDEITTAG
>NZ_CP023696.1|WP_078915425.1|6286712_6288530_+|GAF-domain-containing-sensor-histidine-kinase
MSQLRLDELLDELRARIDAVQGTRDRLHGLLEAVLSVGTELDLPSVLRRIVEAATGLVDAEYGALGVIGEDHMLSEFIPVGVGEEQWAAIGALPSGHGLLGELIRHPEPLRLADLGEHPASSGFPPHHPAMRSFLGVPIRVREKVFGNLYLTEKRGGAEFDADDEVVLSTLAVAAGVAIENARLYEQARRRERWLAASAEVTRRLLSGRPRAEVLELILRRARGNVQADLGFVAVPVTGTRRLRVALAAGEEADRHHGTLLPEHDVYVRSALAASHPVTSTDIESDERTREDVARWSGLGPAVAVPLGSGDTHRGALVLVRAKGRPPFGDEETGPLMGFAGQAALAMELAERRRDAEQIALLEDRDRIARDLHDLAIQRLFATGMTLQSAQRFVDHPLAADRLRRAVDDLDATIAIIRSSIFGLSHHPSGPDGPQTLRGRVTETVRASASSLGFAPALRLEGLLDTHVDGMPGDHLIAVLVEALSNVARHARAHAVDVHVAVTSDRLSLAVTDDGVGIPPGAVRSGLRNIDERARALGGTAEARRRGEGGTRLVWTVPLTAGADAPSGADAPSGPEAPPGPDAPSGAVAPRGSGVDGEAGEDGGG
>NZ_CP023696.1|WP_031129608.1|6288626_6291305_-|GNAT-family-N-acetyltransferase
MPGPQRSTHALLADGSTVCVRPAVPEDAPRVLRFYEDLSERTARLRFLATGHRSAELAAARVAEAPGGHRVLVAEAAGRILGIADFTRAPGTTEADIAVAVADDQHHRGLGTLLLEHLADAAREAGITRFTADALAANREMLRVFSDLGLRVTRSFEGPEVHCVIDLAGTDAYADAVDARGRLADVASLRPLLAPRSAAVVGAGRTPGSVGRAVLRNAHRGGFTGPLRAVNPHADTIEQVGSHPSVSALPFVPELAVLAVPAAAVPDVAEECGRAGVRALLVLTSGLTREQGAALLGHCRRHGMRLVGPNCLGLANTAPGVRLNATFAARPALPGTAGVAVQSGGVGVALLDGLTRLGIGVSTFVSLGDKYDVSGNDLLRWWEADGRTELAVLHLESFGNPRAFSRTARRVARAVPILTVDAGRSEAGRRAAASHTAAAATPTVARQALFAQAGITAARGLGELLDTAALLHGQPLPRGSRVAVVSNAGGAGVLAADACAEAGLTVPALTGESAAQLSEALPGGAVVANPVDATAAVGEEGLRRCVAALDRSPEVDAVLAVLVPTAVAAALGEDLVRALTAPSRALAKPLVAVVPSQGARTVLLPVRGGGHLPAYGDAQDAARALAHAAARARWLARPAGTVPEPAGIDAPGARALVGRFLAAHPRGGWLDPPAAMRLMESYALPLSPWAWAERDTDAATAAERLAGEDGRVVLKAHWPGLVHKSEAGAVALGLRGPEEVRAAYASMARRSGGRLTGVVVQPLAGRGTELLAGVVQDAVFGPLVLFGTGGTATDVLGDHTARLAPLTDVDVTELVGAARCAPLLFGHRTEPADVPAVEQVLLRLSRMAVDLPELAEADLNPVLARPGGATVLDVRVRVEPGRAVDPYLRRLR
>NZ_CP023696.1|WP_078915421.1|6291552_6292452_+|universal-stress-protein
MRAMVSPLVVGVDGSDHSLRALDWACDEALRHGVPLRVVYASLWQRYEGAVPAAGPDRAAERVMAENIAGTAAERVRRRAPRLRVVAEVLPEDAAGALLRESRSAFAVVVGHRGRGGLAGLLLGSVGLSVAAGASCPAVVVRGDEAGVAGTHGRVLLGVGDEAPGSEAVRFAFREARARGATLDVVRAWRCPAHEPRGHPLLGGSPARYHEDLASVVLDRTLEGVAPHHPDVAVRRATAEGPARKVLVARSAAADLLVVGARHRHGGPGMQLGRVAHTVLHHALCPVAVVPEPEPYPEP
>NZ_CP023696.1|WP_031129610.1|6292726_6293269_-|flavodoxin
MSLVRVLYASEHGSTEDIARRIAARLAAHGHRTEVGDIKVSPRLEPGSAAVVLGSAVYGGAWLPPAEAFVRREVAALGAQPVWMFSVGLTAALPKPLRSLAARSEQPRISRLVELLRPRAHHRFSGVIRPEHLGRKGRVIFRLLFCRYGDFRNWAEIDAWADRIAREVGVPGGVRGPGAS
>NZ_CP023696.1|WP_031129611.1|6293402_6294071_-|DUF4389-domain-containing-protein
MTTSPTVYWPVRVRGVLDHPLSRWLWLVKWILALPHYIVLVFLWIAFFLVCVVAFFAVLFTERYPRPLFDFNAGVLRWTWRVSYYAYGALATDRYPPFSLGVEPGYPATLEIAYPERLSRSLVLVKWWLLAIPHYLVLGFFLGGGAHAGPWSGGLIALLALIAAVALAFTGAYPRDLHALVVGLNRWVLRVAAYAALMTDAYPPFRLDQGGEEPVREAAAEK
>NZ_CP023696.1|WP_078915422.1|6294588_6295605_+|universal-stress-protein
MRHDSAQAAGHDSAGQAAGGQAADHGTAGGAAPGRQPAPVRERGEGRGRGPVVAGVDGSEHARSAALWAAGEAEMRGVPLRLVYAVDLDRMTRLASPEVIDGIYADGHELLVGTAAAVRDRFPDLTVRTELSRKEPVAALRAAGGPGDLVVVGNRGLGGFGTLMLGSVGLGVATRAQGPVAVVREDADARRGVVVAAVRGAKDHDWLDLAAGEAEMRGAELRLLSAWSPLSHVGTAVSFLDDLGKMAEEHARKVEAVAGDLRWAHPGLTVTSEVTVGGSAAAALVEGSGSADLVVVGGRRRPLRLGPGLGKVAHALVHHAHCPVMVAPRAQAPDREER
>NZ_CP023696.1|WP_078915423.1|6295601_6296528_+|universal-stress-protein
MTGPAAHGDEPAEAAGGTQDAGVPEAPGDVLVGVDPQDFPVPALAWAADEAARRRARLRLVLALPPHDSRYADSDHRRSTARWAGETALVAAAETVRSLRPRLPVVTALLDGRPAEVLCRLSEGAGLVVVGSRRLSRAEEFLSAGSVVVPVSARADCPVAVVGRPGHAAGGPRPLVVGIDGSTHSVAAAAFAFREAALRGTSVRALWIWRWPAVPPAEEGDAVRERRRLLAGALAPLRSAHPDIGVAQEVLRGHPVEELARASADAAAVVVGRRGRGGYTGMRLGSVVHGLLHRAECPVITVPSKQRE
>NZ_CP023696.1|WP_037937051.1|6296759_6296966_+|DUF1918-domain-containing-protein
MRARVGDRIMVQGPGVGKVRRDGEVVGVRHDDGSPPFDVRWSDNGRVTLYFPGPDAHIHHYEHPRHDD
>NZ_CP023696.1|WP_031129616.1|6297399_6298044_-|CBS-domain-containing-protein
MRASPYTVSDVMSHTAVAVGSRASYKEIVEVMQQWRVSALPVLAGEGRVIGVVSEADLLPKEGYRSGAEPAFASGGAPDAAKAGAVLAEDLMSTPAVTIHADATIAEAARVMARRKVKRLPVVDAQGLLEGVVSRSDLLKVFLRSDAEIAAEIRESILPDIRGTRGMRVKVEEGVVNLSGELPDSTIIPLLARAVRAVEGVVDIRLDLHNPVVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023696_15	15.1\|4936444\|16\|NZ_CP023696\|CRISPRCasFinder	4936444-4936459	16	NZ_CP023696.1	4936561-4936576	0	1.0
NZ_CP023696_2	2.2\|888003\|27\|NZ_CP023696\|CRISPRCasFinder	888003-888029	27	NZ_CP023696.1	888038-888064	1	0.963
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP023696.1	2711254-2711272	1	0.947
NZ_CP023696_16	16.1\|5086563\|18\|NZ_CP023696\|CRISPRCasFinder	5086563-5086580	18	NZ_CP023696.1	5637672-5637689	1	0.944
NZ_CP023696_16	16.3\|5086653\|18\|NZ_CP023696\|CRISPRCasFinder	5086653-5086670	18	NZ_CP023696.1	6643924-6643941	1	0.944
NZ_CP023696_17	17.4\|5479158\|20\|NZ_CP023696\|CRISPRCasFinder	5479158-5479177	20	NZ_CP023696.1	213742-213761	1	0.95
NZ_CP023696_17	17.4\|5479158\|20\|NZ_CP023696\|CRISPRCasFinder	5479158-5479177	20	NZ_CP023696.1	301989-302008	1	0.95
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP023696.1	1583998-1584022	2	0.92
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP023696.1	2963967-2963985	2	0.895
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP023696.1	3832893-3832911	2	0.895
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP023696.1	5011836-5011854	2	0.895
NZ_CP023696_17	17.1\|5479008\|20\|NZ_CP023696\|CRISPRCasFinder	5479008-5479027	20	NZ_CP023696.1	4110872-4110891	2	0.9
NZ_CP023696_17	17.4\|5479158\|20\|NZ_CP023696\|CRISPRCasFinder	5479158-5479177	20	NZ_CP023696.1	392241-392260	2	0.9
NZ_CP023696_17	17.4\|5479158\|20\|NZ_CP023696\|CRISPRCasFinder	5479158-5479177	20	NZ_CP023696.1	960100-960119	2	0.9
NZ_CP023696_17	17.4\|5479158\|20\|NZ_CP023696\|CRISPRCasFinder	5479158-5479177	20	NZ_CP023696.1	5528743-5528762	2	0.9
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP023696.1	4920145-4920163	10	0.474

1. spacer 15.1|4936444|16|NZ_CP023696|CRISPRCasFinder matches to position: 4936561-4936576, mismatch: 0, identity: 1.0

ccctgggcgtcctggc	CRISPR spacer
ccctgggcgtcctggc	Protospacer
****************

2. spacer 2.2|888003|27|NZ_CP023696|CRISPRCasFinder matches to position: 888038-888064, mismatch: 1, identity: 0.963

gtcccccaggggcggaccgtccccagg	CRISPR spacer
gtcccccaggggcggagcgtccccagg	Protospacer
**************** **********

3. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to position: 2711254-2711272, mismatch: 1, identity: 0.947

cctcgcggggcggggcggt	CRISPR spacer
cctcgcggggcgtggcggt	Protospacer
************ ******

4. spacer 16.1|5086563|18|NZ_CP023696|CRISPRCasFinder matches to position: 5637672-5637689, mismatch: 1, identity: 0.944

ggcgtgcggtgccggact	CRISPR spacer
ggcgtgcggtgccggtct	Protospacer
*************** **

5. spacer 16.3|5086653|18|NZ_CP023696|CRISPRCasFinder matches to position: 6643924-6643941, mismatch: 1, identity: 0.944

acctcgccgtgccggacc	CRISPR spacer
acctcgccgagccggacc	Protospacer
********* ********

6. spacer 17.4|5479158|20|NZ_CP023696|CRISPRCasFinder matches to position: 213742-213761, mismatch: 1, identity: 0.95

cgcccgggtccgtgcccgcg	CRISPR spacer
cgcgcgggtccgtgcccgcg	Protospacer
*** ****************

7. spacer 17.4|5479158|20|NZ_CP023696|CRISPRCasFinder matches to position: 301989-302008, mismatch: 1, identity: 0.95

cgcccgggtccgtgcccgcg	CRISPR spacer
cgcccgggtccctgcccgcg	Protospacer
*********** ********

8. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to position: 1583998-1584022, mismatch: 2, identity: 0.92

gggccgcaggggcggccgggggcgc	CRISPR spacer
ggggcgcgggggcggccgggggcgc	Protospacer
*** ***.*****************

9. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to position: 2963967-2963985, mismatch: 2, identity: 0.895

cctcgcggggcggggcggt	CRISPR spacer
cctcgtggggcgggtcggt	Protospacer
*****.******** ****

10. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to position: 3832893-3832911, mismatch: 2, identity: 0.895

cctcgcggggcggggcggt	CRISPR spacer
ccgcgcgggacggggcggt	Protospacer
** ******.*********

11. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to position: 5011836-5011854, mismatch: 2, identity: 0.895

cctcgcggggcggggcggt	CRISPR spacer
ccgcgcggggcggggcagt	Protospacer
** *************.**

12. spacer 17.1|5479008|20|NZ_CP023696|CRISPRCasFinder matches to position: 4110872-4110891, mismatch: 2, identity: 0.9

gccgccgtcctgagcccggc	CRISPR spacer
gccgccgccgtgagcccggc	Protospacer
*******.* **********

13. spacer 17.4|5479158|20|NZ_CP023696|CRISPRCasFinder matches to position: 392241-392260, mismatch: 2, identity: 0.9

cgcccgggtccgtgcccgcg	CRISPR spacer
cggcccggtccgtgcccgcg	Protospacer
** ** **************

14. spacer 17.4|5479158|20|NZ_CP023696|CRISPRCasFinder matches to position: 960100-960119, mismatch: 2, identity: 0.9

cgcccgggtccgtgcccgcg	CRISPR spacer
cgcccgggcccgtgtccgcg	Protospacer
********.*****.*****

15. spacer 17.4|5479158|20|NZ_CP023696|CRISPRCasFinder matches to position: 5528743-5528762, mismatch: 2, identity: 0.9

cgcccgggtccgtgcccgcg	CRISPR spacer
cgcccgggtccgtgaccccg	Protospacer
************** ** **

16. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to position: 4920145-4920163, mismatch: 10, identity: 0.474

---------cctcgcggggcggggcggt	CRISPR spacer
accgcgccgcctcgcgagg---------	Protospacer
         *******.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023696_12	12.3\|4022580\|19\|NZ_CP023696\|CRT	4022580-4022598	19	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	781155-781173	0	1.0
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	136732-136754	2	0.913
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	NZ_CP024423	Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence	93417-93439	2	0.913
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	NZ_CP020441	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence	110219-110241	2	0.913
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	NZ_CP044080	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence	86906-86928	2	0.913
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	NZ_CP031079	Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence	90167-90189	2	0.913
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP017078	Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence	286713-286737	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP028973	Aminobacter sp. MSH1 plasmid pUSP5, complete sequence	328-352	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_LR723681	Arsenite-oxidising bacterium NT-25 plasmid 5	13466-13490	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP045337	Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence	21390-21414	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP029835	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence	282082-282106	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	CP021187	Sphingomonas wittichii DC-6 plasmid pDC06, complete sequence	7250-7274	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	112174-112198	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP038146	Streptomyces sp. S501 plasmid unnamed, complete sequence	77073-77097	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_KU922118	Starkeya novella strain EL1 plasmid pDCA, complete sequence	3388-3412	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP045332	Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence	25-49	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP039915	Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence	2901-2925	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP045348	Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence	12855-12879	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_FO082822	Rhizobium sp. NT-26 plasmid NT26_p2, complete sequence	12683-12707	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_LS974446	Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence	160344-160368	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_KU922121	Xanthobacter flavus strain EL8 plasmid pDCA, complete sequence	3387-3411	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	23144-23168	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_KJ599675	Micrococcus sp. A7 plasmid pLMA7, complete sequence	58114-58138	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_LR134454	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence	73579-73603	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_KR152226	Micrococcus sp. MG-2010-D12 plasmid pJD12, complete sequence	59033-59057	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NC_024972	Micrococcus sp. A1 plasmid pLMA1, complete sequence	71403-71427	3	0.88
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	567626-567650	3	0.88
NZ_CP023696_22	22.2\|6284758\|23\|NZ_CP023696\|CRT	6284758-6284780	23	NC_012809	Methylorubrum extorquens AM1 plasmid p2META1, complete sequence	7540-7562	3	0.87
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	475535-475559	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	MH588544	Caulobacter phage CcrBL10, complete genome	93283-93307	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	518107-518131	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	122752-122776	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	46975-46999	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP045074	Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence	365596-365620	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	3934-3958	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP019460	Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence	19405-19429	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	165328-165352	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1326400-1326424	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	153540-153564	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP015231	Epibacterium mobile F1926 plasmid unnamed1, complete sequence	401359-401383	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP016354	Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence	104802-104826	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	216961-216985	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	585386-585410	4	0.84
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	181706-181730	4	0.84
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	1566482-1566509	4	0.857
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP013052	Sinorhizobium americanum CCGM7 plasmid A, complete sequence	158271-158298	4	0.857
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022421	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-6, complete sequence	81973-82000	4	0.857
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP045388	Ruegeria sp. THAF33 plasmid pTHAF33_d, complete sequence	69200-69227	4	0.857
NZ_CP023696_2	2.2\|888003\|27\|NZ_CP023696\|CRISPRCasFinder	888003-888029	27	NZ_LR134445	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence	1797-1823	5	0.815
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP016080	Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence	198336-198360	5	0.8
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NC_007507	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183, complete sequence	128099-128123	5	0.8
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP017191	Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_1, complete sequence	117411-117435	5	0.8
NZ_CP023696_8	8.1\|2693225\|25\|NZ_CP023696\|CRISPRCasFinder	2693225-2693249	25	NZ_CP018463	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence	102-126	5	0.8
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP015091	Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence	8618-8645	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1659173-1659200	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1571437-1571464	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1571438-1571465	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	813905-813932	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1584031-1584058	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1574159-1574186	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1584199-1584226	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1584182-1584209	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1584162-1584189	5	0.821
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP039643	Azospirillum sp. TSA2s plasmid p3	40663-40690	5	0.821
NZ_CP023696_17	17.3\|5479104\|26\|NZ_CP023696\|CRISPRCasFinder	5479104-5479129	26	MT104122	Sporosarcina phage Lietuvens, complete genome	19592-19617	5	0.808
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NC_006362	Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence	18485-18515	5	0.839
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NC_006362	Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence	18485-18515	5	0.839
NZ_CP023696_3	3.1\|959971\|29\|NZ_CP023696\|CRISPRCasFinder	959971-959999	29	ASHF01000034	Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence	125149-125177	6	0.793
NZ_CP023696_3	3.1\|959971\|29\|NZ_CP023696\|CRISPRCasFinder	959971-959999	29	NZ_CP046573	Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence	778936-778964	6	0.793
NZ_CP023696_3	3.1\|959971\|29\|NZ_CP023696\|CRISPRCasFinder	959971-959999	29	NC_007641	Rhodospirillum rubrum ATCC 11170 plasmid unnamed, complete sequence	52538-52566	6	0.793
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	266539-266567	6	0.793
NZ_CP023696_5	5.1\|1521497\|31\|NZ_CP023696\|CRISPRCasFinder	1521497-1521527	31	KU160644	Arthrobacter phage Galaxy, complete genome	21939-21969	6	0.806
NZ_CP023696_5	5.1\|1521497\|31\|NZ_CP023696\|CRISPRCasFinder	1521497-1521527	31	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	601565-601595	6	0.806
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NZ_CP013540	Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence	30375-30405	6	0.806
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1716687-1716714	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	460505-460532	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	CP021131	Meiothermus taiwanensis strain WR-220 plasmid pMtWR-220, complete sequence	241847-241874	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP018233	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence	49507-49534	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	96578-96605	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP016593	Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence	256314-256341	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_017386	Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence	191515-191542	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_014621	Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence	158536-158563	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP012909	Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence	256324-256351	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	61450-61477	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_009959	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence	47120-47147	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	JQ807228	Environmental Halophage eHP-7, partial genome	4915-4942	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	MK559428	Mycobacterium phage Elephantoon, complete genome	7262-7289	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	MN369764	Mycobacterium phage Rahalelujah, complete genome	5707-5734	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	MN234209	Mycobacterium phage Toaka, complete genome	5987-6014	6	0.786
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	MT889365	Microbacterium phage Quenya, complete genome	14256-14283	6	0.786
NZ_CP023696_12	12.1\|4022469\|28\|NZ_CP023696\|CRT	4022469-4022496	28	MK279853	Gordonia phage Gray, complete genome	39560-39587	6	0.786
NZ_CP023696_12	12.1\|4022469\|28\|NZ_CP023696\|CRT	4022469-4022496	28	MN586022	Gordonia phage Chidiebere, complete genome	39559-39586	6	0.786
NZ_CP023696_3	3.1\|959971\|29\|NZ_CP023696\|CRISPRCasFinder	959971-959999	29	NC_017081	Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1, complete sequence	44528-44556	7	0.759
NZ_CP023696_4	4.1\|1120035\|31\|NZ_CP023696\|CRISPRCasFinder	1120035-1120065	31	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	126669-126699	7	0.774
NZ_CP023696_4	4.1\|1120035\|31\|NZ_CP023696\|CRISPRCasFinder	1120035-1120065	31	NZ_CP035092	Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence	485660-485690	7	0.774
NZ_CP023696_4	4.1\|1120035\|31\|NZ_CP023696\|CRISPRCasFinder	1120035-1120065	31	NC_008688	Paracoccus denitrificans PD1222 plasmid 1, complete sequence	79193-79223	7	0.774
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	1075759-1075787	7	0.759
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	NC_008269	Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence	1119076-1119104	7	0.759
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	677489-677517	7	0.759
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	334745-334773	7	0.759
NZ_CP023696_5	5.3\|1521605\|31\|NZ_CP023696\|CRISPRCasFinder	1521605-1521635	31	NZ_CP014308	Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence	377260-377290	7	0.774
NZ_CP023696_5	5.3\|1521605\|31\|NZ_CP023696\|CRISPRCasFinder	1521605-1521635	31	NZ_CP014309	Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence	457845-457875	7	0.774
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	249696-249726	7	0.774
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	249361-249391	7	0.774
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	474532-474562	7	0.774
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	30352-30379	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	286340-286367	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1472146-1472173	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_015188	Acidiphilium multivorum AIU301 plasmid pACMV4, complete sequence	20343-20370	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_008826	Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence	513526-513553	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	880916-880943	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	266171-266198	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1761336-1761363	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	868588-868615	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP020697	Sulfitobacter sp. D7 plasmid p3SUD7, complete sequence	62002-62029	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1684784-1684811	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1503841-1503868	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP010760	Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence	40444-40471	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP010603	Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence	40450-40477	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	627738-627765	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1679263-1679290	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP010709	Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence	40445-40472	7	0.75
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1251467-1251494	7	0.75
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	42474-42504	7	0.774
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	844858-844888	7	0.774
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	447827-447857	7	0.774
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	42474-42504	7	0.774
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	844858-844888	7	0.774
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP021355	Rhodococcus sp. S2-17 plasmid pRB98, complete sequence	447827-447857	7	0.774
NZ_CP023696_4	4.1\|1120035\|31\|NZ_CP023696\|CRISPRCasFinder	1120035-1120065	31	NZ_CP041156	Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence	60609-60639	8	0.742
NZ_CP023696_4	4.1\|1120035\|31\|NZ_CP023696\|CRISPRCasFinder	1120035-1120065	31	NZ_CP031601	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence	2014-2044	8	0.742
NZ_CP023696_4	4.2\|1120099\|29\|NZ_CP023696\|CRISPRCasFinder	1120099-1120127	29	MT771341	Gordonia phage DirtyBoi, complete genome	42545-42573	8	0.724
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NZ_CP040820	Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence	193921-193951	8	0.742
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	243970-243997	8	0.714
NZ_CP023696_8	8.2\|2693291\|28\|NZ_CP023696\|CRISPRCasFinder	2693291-2693318	28	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	159704-159731	8	0.714
NZ_CP023696_18	18.1\|5637392\|36\|NZ_CP023696\|CRISPRCasFinder	5637392-5637427	36	CP006880	Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence	1862716-1862751	8	0.778
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	174957-174987	8	0.742
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1693703-1693733	8	0.742
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1632992-1633022	8	0.742
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	294225-294255	8	0.742
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	294234-294264	8	0.742
NZ_CP023696_22	22.1\|6284708\|31\|NZ_CP023696\|CRT	6284708-6284738	31	KM677211	Mycobacterium phage Murucutumbu, complete genome	53703-53733	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP029776	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence	174957-174987	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1693703-1693733	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1632992-1633022	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	294225-294255	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	294234-294264	8	0.742
NZ_CP023696_22	22.3\|6284800\|31\|NZ_CP023696\|CRT	6284800-6284830	31	KM677211	Mycobacterium phage Murucutumbu, complete genome	53703-53733	8	0.742
NZ_CP023696_5	5.1\|1521497\|31\|NZ_CP023696\|CRISPRCasFinder	1521497-1521527	31	NC_021077	Comamonas sp. 7D-2 plasmid pBHB, complete sequence	14663-14693	9	0.71
NZ_CP023696_5	5.4\|1521659\|31\|NZ_CP023696\|CRISPRCasFinder	1521659-1521689	31	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	287395-287425	9	0.71

1. spacer 12.3|4022580|19|NZ_CP023696|CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cctcgcggggcggggcggt	CRISPR spacer
cctcgcggggcggggcggt	Protospacer
*******************

2. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

aagcgtgtccccggcgtgcccgg	CRISPR spacer
gagcgcgtccccggcgtgcccgg	Protospacer
.****.*****************

3. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to NZ_CP024423 (Paracoccus yeei strain TT13 plasmid pTT13-1, complete sequence) position: , mismatch: 2, identity: 0.913

aagcgtgtccccggcgtgcccgg	CRISPR spacer
cagcgtgtcgccggcgtgcccgg	Protospacer
 ******** *************

4. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.913

aagcgtgtccccggcgtgcccgg	CRISPR spacer
cagcgtgtcgccggcgtgcccgg	Protospacer
 ******** *************

5. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to NZ_CP044080 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.913

aagcgtgtccccggcgtgcccgg	CRISPR spacer
cagcgtgtcgccggcgtgcccgg	Protospacer
 ******** *************

6. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to NZ_CP031079 (Paracoccus yeei strain CCUG 32053 plasmid pYEE1, complete sequence) position: , mismatch: 2, identity: 0.913

aagcgtgtccccggcgtgcccgg	CRISPR spacer
cagcgtgtcgccggcgtgcccgg	Protospacer
 ******** *************

7. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

8. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP028973 (Aminobacter sp. MSH1 plasmid pUSP5, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

9. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_LR723681 (Arsenite-oxidising bacterium NT-25 plasmid 5) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

10. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP045337 (Labrenzia sp. THAF191a plasmid pTHAF191a_d, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

11. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP029835 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
cggccgcacgggcggccggggccgc	Protospacer
 ******* ************ ***

12. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to CP021187 (Sphingomonas wittichii DC-6 plasmid pDC06, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

13. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
cggccgcaggggcggccgggaccgc	Protospacer
 *******************. ***

14. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcaggggcagcagggggcgt	Protospacer
*************.** *******.

15. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_KU922118 (Starkeya novella strain EL1 plasmid pDCA, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

16. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP045332 (Labrenzia sp. THAF191b plasmid pTHAF191b_d, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

17. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP039915 (Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625d, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

18. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP045348 (Labrenzia sp. THAF187b plasmid pTHAF187b_d, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

19. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_FO082822 (Rhizobium sp. NT-26 plasmid NT26_p2, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

20. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtaggggcggccgagggcgg	Protospacer
******.***********.*****

21. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_KU922121 (Xanthobacter flavus strain EL8 plasmid pDCA, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgtagggacggccgggggcgg	Protospacer
******.****.************

22. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcagaggcggccggggcggc	Protospacer
*********.***********  **

23. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_KJ599675 (Micrococcus sp. A7 plasmid pLMA7, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcagaggcggccggggcggc	Protospacer
*********.***********  **

24. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_LR134454 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 12, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gcgccgcgggggcggccggggccgc	Protospacer
* *****.************* ***

25. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_KR152226 (Micrococcus sp. MG-2010-D12 plasmid pJD12, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcagaggcggccggggcggc	Protospacer
*********.***********  **

26. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NC_024972 (Micrococcus sp. A1 plasmid pLMA1, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcagaggcggccggggcggc	Protospacer
*********.***********  **

27. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcaggagcggccggggtggc	Protospacer
**********.**********  **

28. spacer 22.2|6284758|23|NZ_CP023696|CRT matches to NC_012809 (Methylorubrum extorquens AM1 plasmid p2META1, complete sequence) position: , mismatch: 3, identity: 0.87

aagcgtgtccccggcgtgcccgg	CRISPR spacer
cagcgtgtccccggcctgcccga	Protospacer
 ************** ******.

29. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
tcgccgcgggggcggccgggggcgt	Protospacer
  *****.****************.

30. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to MH588544 (Caulobacter phage CcrBL10, complete genome) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
aagccgcaggggcggccggcggcgt	Protospacer
..***************** ****.

31. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
tggccgcagctgcggccgggggcgt	Protospacer
 ********  *************.

32. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
ttgccgccggggcggccggcggcgc	Protospacer
  ***** *********** *****

33. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
aggccgcaggggcgtccggcggcgg	Protospacer
.************* **** ****

34. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
tgcccgcaggggcggccgggtgcgg	Protospacer
 * ***************** ***

35. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
cgggcgcaggggcggccgggggggg	Protospacer
 ** ****************** *

36. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP019460 (Streptomyces autolyticus strain CGMCC0516 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
cgggcgcaggggcggccgggggggg	Protospacer
 ** ****************** *

37. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
cggtcgcgggggcggccgggggcgg	Protospacer
 **.***.****************

38. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
ttgccgccggggcggccggcggcgc	Protospacer
  ***** *********** *****

39. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
ccgccgccggggccgccgggggcgc	Protospacer
  ***** ***** ***********

40. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP015231 (Epibacterium mobile F1926 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
ccgccgcagcggcgaccgggggcgc	Protospacer
  ******* ****.**********

41. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP016354 (Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
aggccgcagtggcggccggggtcga	Protospacer
.******** *********** **

42. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
cggccgcagcggtggccgggggcgg	Protospacer
 ******** **.***********

43. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
ttgccgccggggcggccggcggcgc	Protospacer
  ***** *********** *****

44. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgcaggggcggccgggggcgc	CRISPR spacer
aggtcgcaggggcggccggtggcgt	Protospacer
.**.*************** ****.

45. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 4, identity: 0.857

-cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcgcct-cgccctcgcccttcgcgagcgt	Protospacer
 ****. ************* *******

46. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP013052 (Sinorhizobium americanum CCGM7 plasmid A, complete sequence) position: , mismatch: 4, identity: 0.857

-cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcgcct-cgccctcgcccttcgcgagcgt	Protospacer
 ****. ************* *******

47. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022421 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-6, complete sequence) position: , mismatch: 4, identity: 0.857

cgcccgcgccctcgcccttggcgagcga-	CRISPR spacer
cgccgccgccctcgcccttggcg-gcgcc	Protospacer
****  ***************** ***

48. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP045388 (Ruegeria sp. THAF33 plasmid pTHAF33_d, complete sequence) position: , mismatch: 4, identity: 0.857

cgcccgcgccctcgcccttggcgagcga-	CRISPR spacer
cgccgccgccctcgcccttggcg-gcgcc	Protospacer
****  ***************** ***

49. spacer 2.2|888003|27|NZ_CP023696|CRISPRCasFinder matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 5, identity: 0.815

gtcccccaggggcggaccgtccccagg----	CRISPR spacer
ggcccccaggggcggaccgtc----ggacta	Protospacer
* *******************    **

50. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP016080 (Mesorhizobium loti NZP2037 plasmid pML2037, complete sequence) position: , mismatch: 5, identity: 0.8

gggccgcaggggcggccgggggcgc	CRISPR spacer
gggccgcaggggcggccgggcttag	Protospacer
********************  ..

51. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NC_007507 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183, complete sequence) position: , mismatch: 5, identity: 0.8

gggccgcaggggcggccgggggcgc	CRISPR spacer
ccgccgcaggggcggccggggcagt	Protospacer
  *******************  *.

52. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP017191 (Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid p_XCV_1, complete sequence) position: , mismatch: 5, identity: 0.8

gggccgcaggggcggccgggggcgc	CRISPR spacer
ccgccgcaggggcggccggggcagt	Protospacer
  *******************  *.

53. spacer 8.1|2693225|25|NZ_CP023696|CRISPRCasFinder matches to NZ_CP018463 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.2, complete sequence) position: , mismatch: 5, identity: 0.8

gggccgcaggggcggccgggggcgc	CRISPR spacer
ccgccgcaggggcggccggggcagt	Protospacer
  *******************  *.

54. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP015091 (Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
agcgcgcgccctcgcccttggcgatctc	Protospacer
 ** ******************** *

55. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

56. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

57. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

58. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cggaaacgccctcgcccttggcgatcga	Protospacer
**   .****************** ***

59. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

60. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

61. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

62. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

63. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccgccgcccttggcgtgagc	Protospacer
********** .*********** * *

64. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP039643 (Azospirillum sp. TSA2s plasmid p3) position: , mismatch: 5, identity: 0.821

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
catccgcgccgtcgcctttggcgagcca	Protospacer
*..******* *****.********* *

65. spacer 17.3|5479104|26|NZ_CP023696|CRISPRCasFinder matches to MT104122 (Sporosarcina phage Lietuvens, complete genome) position: , mismatch: 5, identity: 0.808

tatccgtacccgtgcctgggtccgta	CRISPR spacer
cttccgtccccgtgcctgcgtccgtc	Protospacer
. ***** ********** ******

66. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 5, identity: 0.839

tcgcccccgggccgtaccggccgcctgacgc-	CRISPR spacer
tcgccccggtgccgtaccggccg-gtgccgcc	Protospacer
******* * *************  ** ***

67. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NC_006362 (Nocardia farcinica IFM 10152 plasmid pNF1, complete sequence) position: , mismatch: 5, identity: 0.839

tcgcccccgggccgtaccggccgcctgacgc-	CRISPR spacer
tcgccccggtgccgtaccggccg-gtgccgcc	Protospacer
******* * *************  ** ***

68. spacer 3.1|959971|29|NZ_CP023696|CRISPRCasFinder matches to ASHF01000034 (Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence) position: , mismatch: 6, identity: 0.793

acgaggggggtcggctcggcacccgccca	CRISPR spacer
aggaggggggtcggccccgcacccgcggg	Protospacer
* *************.* ********  .

69. spacer 3.1|959971|29|NZ_CP023696|CRISPRCasFinder matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 6, identity: 0.793

acgaggggggtcggctcggcacccgccca	CRISPR spacer
acgaggggagtcggctcggcgccgccctg	Protospacer
********.***********.**  **..

70. spacer 3.1|959971|29|NZ_CP023696|CRISPRCasFinder matches to NC_007641 (Rhodospirillum rubrum ATCC 11170 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

acgaggggggtcggctcggcacccgccca	CRISPR spacer
acgatggcggtcggctcggcaccttggca	Protospacer
**** ** ***************.   **

71. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.793

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
cgagcagtacgcccgggtggcgcggccgc	Protospacer
***** **************.****

72. spacer 5.1|1521497|31|NZ_CP023696|CRISPRCasFinder matches to KU160644 (Arthrobacter phage Galaxy, complete genome) position: , mismatch: 6, identity: 0.806

gccgcgcacagcgcggggccctcgtggcccg	CRISPR spacer
agcgaccacagcgcgtggccctcgaggcccg	Protospacer
. **  ********* ******** ******

73. spacer 5.1|1521497|31|NZ_CP023696|CRISPRCasFinder matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 6, identity: 0.806

gccgcgcacagcgcggggccctcgtggcccg	CRISPR spacer
ccggcggacagcgcggggcccgcgtggtctg	Protospacer
 * *** ************** *****.*.*

74. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP013540 (Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence) position: , mismatch: 6, identity: 0.806

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
cccgacaggccctcgtggggcgcgagtgatc	Protospacer
***** ****** ************* *..

75. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gccccgcgtcctcgccctgggcgagccg	Protospacer
  ******.********* ******* .

76. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcgccgcgccctcgcccgtggcgaggaa	Protospacer
   ************** ******* .*

77. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to CP021131 (Meiothermus taiwanensis strain WR-220 plasmid pMtWR-220, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ccttcgcgccctcgcccttggcgacggg	Protospacer
* ..********************  *.

78. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP018233 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcgccacgacctcgcccttggcgagcgt	Protospacer
   **.** ******************

79. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gccccgcgtcctcgccctgggcgagccg	Protospacer
  ******.********* ******* .

80. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP016593 (Ketogulonicigenium vulgare strain SKV plasmid pKvSKV1, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gacccgcaccctcggccttggcgaggta	Protospacer
 .*****.****** **********  *

81. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_017386 (Ketogulonicigenium vulgare WSH-001 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gacccgcaccctcggccttggcgaggta	Protospacer
 .*****.****** **********  *

82. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_014621 (Ketogulonicigenium vulgare Y25 plasmid pYP1, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gacccgcaccctcggccttggcgaggta	Protospacer
 .*****.****** **********  *

83. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP012909 (Ketogulonicigenium vulgare strain Hbe602 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gacccgcaccctcggccttggcgaggta	Protospacer
 .*****.****** **********  *

84. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcccgcgccctcgcccgtgccgccctc	Protospacer
***************** ** **  *

85. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_009959 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI05, complete sequence) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgcctgcgccctcgccctgggcgccagc	Protospacer
****.************* ****   *

86. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to JQ807228 (Environmental Halophage eHP-7, partial genome) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
agtgcgcgcccttgcgcttggcgagcgg	Protospacer
 *. ********.** ***********.

87. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to MK559428 (Mycobacterium phage Elephantoon, complete genome) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ctcccggaccctcgcccttggcgagtcg	Protospacer
* **** .*****************. .

88. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to MN369764 (Mycobacterium phage Rahalelujah, complete genome) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ctcccggcccctcgcccttggcgagtcg	Protospacer
* ****  *****************. .

89. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to MN234209 (Mycobacterium phage Toaka, complete genome) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ctcccggaccctcgcccttggcgagtcg	Protospacer
* **** .*****************. .

90. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to MT889365 (Microbacterium phage Quenya, complete genome) position: , mismatch: 6, identity: 0.786

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ggtccgcgccctcgccctggccgagcac	Protospacer
 *.*************** * *****.

91. spacer 12.1|4022469|28|NZ_CP023696|CRT matches to MK279853 (Gordonia phage Gray, complete genome) position: , mismatch: 6, identity: 0.786

cgctgcgtacgggcatgttgtcctcctg	CRISPR spacer
ctgcgcgtaccggcatgttgccctcctc	Protospacer
*  .****** *********.******

92. spacer 12.1|4022469|28|NZ_CP023696|CRT matches to MN586022 (Gordonia phage Chidiebere, complete genome) position: , mismatch: 6, identity: 0.786

cgctgcgtacgggcatgttgtcctcctg	CRISPR spacer
ctgcgcgtaccggcatgttgccctcctc	Protospacer
*  .****** *********.******

93. spacer 3.1|959971|29|NZ_CP023696|CRISPRCasFinder matches to NC_017081 (Phycisphaera mikurensis NBRC 102666 plasmid pPSMK1, complete sequence) position: , mismatch: 7, identity: 0.759

acgaggggggtcggctcggcacccgccca	CRISPR spacer
ctggagggcgtcgtctcggcacccgcccg	Protospacer
 .*..*** **** **************.

94. spacer 4.1|1120035|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 7, identity: 0.774

gaggccgtgcgtccgaacggcgcgcgggact	CRISPR spacer
gaggccgtgggtccgaacggcgcggcgatgg	Protospacer
********* **************  *.

95. spacer 4.1|1120035|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP035092 (Paracoccus denitrificans strain ATCC 19367 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

gaggccgtgcgtccgaacggcgcgcgggact	CRISPR spacer
caggccgagcgcccgaacggcgcgctgcaac	Protospacer
 ****** ***.************* * * .

96. spacer 4.1|1120035|31|NZ_CP023696|CRISPRCasFinder matches to NC_008688 (Paracoccus denitrificans PD1222 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

gaggccgtgcgtccgaacggcgcgcgggact	CRISPR spacer
caggccgagcgcccgaacggcgcgctgcaac	Protospacer
 ****** ***.************* * * .

97. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 7, identity: 0.759

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
agtgccgtacgcccgggtggcgcaggagc	Protospacer
 * *****************.**.**.

98. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 7, identity: 0.759

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
cgacccggacgcccgggtggtgcaagcgc	Protospacer
*** *** ***************..*

99. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 7, identity: 0.759

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
agtgccgtacgcccgggtggcgcaggagc	Protospacer
 * *****************.**.**.

100. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 7, identity: 0.759

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
agtgccgtacgcccgggtggcgcaggagc	Protospacer
 * *****************.**.**.

101. spacer 5.3|1521605|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP014308 (Burkholderia sp. PAMC 26561 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.774

gccgca----gaggactcggggtccgcggaagacg	CRISPR spacer
----cagttcgacgactcagggtccgcggaagaag	Protospacer
    **    ** *****.************** *

102. spacer 5.3|1521605|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP014309 (Burkholderia sp. PAMC 26561 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

gccgca----gaggactcggggtccgcggaagacg	CRISPR spacer
----cagttcgacgactcagggtccgcggaagaag	Protospacer
    **    ** *****.************** *

103. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.774

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
cgcgcttggcccgcgtggggcgcgcgcggca	Protospacer
* **   ***************** * ***.

104. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.774

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
cgcgcttggcccgcgtggggcgcgcgcggca	Protospacer
* **   ***************** * ***.

105. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.774

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
cgcgcttggcccgcgtggggcgcgcgcggca	Protospacer
* **   ***************** * ***.

106. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgaccttgcccttggcgagctt	Protospacer
   ***** ***.*************

107. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccctcgcccacgcccttggcgccgag	Protospacer
***** ***** ***********   ..

108. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

109. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_015188 (Acidiphilium multivorum AIU301 plasmid pACMV4, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ggcctgcgccctcgccctcggcgacaac	Protospacer
 ***.*************.*****  .

110. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
ggcccgagccctcgcccttggcatggag	Protospacer
 ***** ***************. * ..

111. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

112. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccctcgcccacgcccttggcgccgag	Protospacer
***** ***** ***********   ..

113. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

114. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

115. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP020697 (Sulfitobacter sp. D7 plasmid p3SUD7, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccgccgccctcgcccttggcggtgcc	Protospacer
****  *****************.

116. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

117. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gaagcgctccctcggccttggcgagcgg	Protospacer
 .  *** ****** ************.

118. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP010760 (Phaeobacter inhibens strain P80 plasmid pP80_d, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccggtgccctcgcccttggcggagct	Protospacer
**** *.****************..

119. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP010603 (Phaeobacter inhibens strain P83 plasmid pP83_d, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccggtgccctcgcccttggcggagct	Protospacer
**** *.****************..

120. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gaagcgctccctcggccttggcgagcgg	Protospacer
 .  *** ****** ************.

121. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gaagcgctccctcggccttggcgagcgg	Protospacer
 .  *** ****** ************.

122. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP010709 (Phaeobacter inhibens strain P66 plasmid pP66_d, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
cgccggtgccctcgcccttggcggagct	Protospacer
**** *.****************..

123. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.75

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
gcaccgcgccctcggccttggcgaaggc	Protospacer
   *********** *********. *

124. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

125. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

126. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

127. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

128. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

129. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 7, identity: 0.774

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
ccgccaccgggccgtaccgggcgcccacccc	Protospacer
.**** ************** ****.. * *

130. spacer 4.1|1120035|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP041156 (Leisingera aquaemixtae strain R2C4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gaggccgtgcgtccgaacggcgcgcgggact	CRISPR spacer
gtcggcgtccgtccgaacggcgcgctggcgg	Protospacer
*  * *** **************** **

131. spacer 4.1|1120035|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP031601 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence) position: , mismatch: 8, identity: 0.742

gaggccgtgcgtccgaacggcgcgcgggact	CRISPR spacer
cggtccgagcgtccgaccggcgcgcggtctt	Protospacer
 .* *** ******** **********  .*

132. spacer 4.2|1120099|29|NZ_CP023696|CRISPRCasFinder matches to MT771341 (Gordonia phage DirtyBoi, complete genome) position: , mismatch: 8, identity: 0.724

cgagccgtacgcccgggtggtgcggggtg	CRISPR spacer
gtggccgtacgcccgggtgttgctggtcc	Protospacer
  .**************** *** ** .

133. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NZ_CP040820 (Paraoceanicella profunda strain D4M1 plasmid pD4M1B, complete sequence) position: , mismatch: 8, identity: 0.742

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
acgccgtggcgcgcgtggggcgcgaggcgcg	Protospacer
 *   . *** **************** ***

134. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 8, identity: 0.714

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
actccgcgccttcgcccttggcgatgtc	Protospacer
  .*******.*************

135. spacer 8.2|2693291|28|NZ_CP023696|CRISPRCasFinder matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 8, identity: 0.714

cgcccgcgccctcgcccttggcgagcga	CRISPR spacer
atttgccgccctcgtccttggcgagcgg	Protospacer
  ..  ********.************.

136. spacer 18.1|5637392|36|NZ_CP023696|CRISPRCasFinder matches to CP006880 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602c, complete sequence) position: , mismatch: 8, identity: 0.778

-ccacgcgttgccgacgcgggcgacgggcgacgccat	CRISPR spacer
actgcg-gtcgccgacgcgggcgacgggcggcgctga	Protospacer
 *..** **.********************.***..

137. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
gtatatccgggccgtaccggccgcctcgcgc	Protospacer
 ... .******************** .***

138. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

139. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

140. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

141. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

142. spacer 22.1|6284708|31|NZ_CP023696|CRT matches to KM677211 (Mycobacterium phage Murucutumbu, complete genome) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcc----tgacgc	CRISPR spacer
gtgcccgcggggcgtaccggccgccaccatg----	Protospacer
 .**** **** *************    **

143. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP029776 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
gtatatccgggccgtaccggccgcctcgcgc	Protospacer
 ... .******************** .***

144. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

145. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

146. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

147. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcctgacgc	CRISPR spacer
tcgcctccggcccgtaccggccggaagtcat	Protospacer
*****.**** ************   * *..

148. spacer 22.3|6284800|31|NZ_CP023696|CRT matches to KM677211 (Mycobacterium phage Murucutumbu, complete genome) position: , mismatch: 8, identity: 0.742

tcgcccccgggccgtaccggccgcc----tgacgc	CRISPR spacer
gtgcccgcggggcgtaccggccgccaccatg----	Protospacer
 .**** **** *************    **

149. spacer 5.1|1521497|31|NZ_CP023696|CRISPRCasFinder matches to NC_021077 (Comamonas sp. 7D-2 plasmid pBHB, complete sequence) position: , mismatch: 9, identity: 0.71

gccgcgcacagcgcggggccctcgtggcccg	CRISPR spacer
ctcgcccagagcgcggggccctcgtcctcgt	Protospacer
 .*** ** ****************  .*

150. spacer 5.4|1521659|31|NZ_CP023696|CRISPRCasFinder matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 9, identity: 0.71

cccgaaaggcccgcgtggggcgcgaggggcg	CRISPR spacer
cgactcaggcccgcgtgggccgcgtggggtt	Protospacer
*     ************* **** ****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1340126 : 1364059

Streptomyces_phage(37.5%)

terminase,portal,protease,capsid,head,integrase

attL 1333417:1333434|attR 1346940:1346957

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1333417:1333434	attL	NA	NA	NA	NA
WP_031129139.1\|1340126_1341161_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJP1	Virus_Rctr41k	6.6e-05	25.8
WP_140160857.1\|1341157_1341391_-	hypothetical protein	NA	NA	NA	NA
WP_031129141.1\|1341825_1342188_-	hypothetical protein	NA	NA	NA	NA
WP_031129142.1\|1342184_1342625_-	hypothetical protein	Q6VY36	Streptomyces_phage	2.3e-55	71.1
WP_031129143.1\|1342624_1342972_-	hypothetical protein	NA	NA	NA	NA
WP_078915370.1\|1342978_1343794_-	N-acetylmuramoyl-L-alanine amidase	A0A249XNN9	Brevibacterium_phage	9.8e-12	27.5
WP_031129145.1\|1343806_1344544_-	PIG-L family deacetylase	NA	NA	NA	NA
WP_031129146.1\|1344607_1345123_-	hypothetical protein	NA	NA	NA	NA
WP_031129147.1\|1345138_1345753_-	hypothetical protein	NA	NA	NA	NA
WP_031129148.1\|1345749_1346844_-	DUF5047 domain-containing protein	Q6VY40	Streptomyces_phage	4.8e-115	58.4
WP_031129149.1\|1346844_1349079_-	hypothetical protein	Q6VY41	Streptomyces_phage	4.1e-238	59.2
1346940:1346957	attR	NA	NA	NA	NA
WP_085921465.1\|1349082_1352646_-	transglycosylase SLT domain-containing protein	A0A2H5BLS1	Streptomyces_phage	1.5e-152	40.3
WP_051839012.1\|1352572_1352860_-	hypothetical protein	NA	NA	NA	NA
WP_031129152.1\|1352994_1353336_-	hypothetical protein	Q6VY44	Streptomyces_phage	5.0e-26	50.0
WP_031129153.1\|1353338_1353692_-	hypothetical protein	NA	NA	NA	NA
WP_031129154.1\|1353770_1354541_-	Ig domain-containing protein	A0A2H4PA04	Gordonia_phage	1.0e-26	41.2
WP_031129155.1\|1354594_1355020_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_031129156.1\|1355016_1355298_-	hypothetical protein	A0A2H4PAG9	Gordonia_phage	1.6e-09	44.8
WP_031129157.1\|1355306_1355648_-	hypothetical protein	NA	NA	NA	NA
WP_031129158.1\|1355644_1356190_-	hypothetical protein	A0A0U4JBB0	Arthrobacter_phage	2.6e-08	36.4
WP_140160858.1\|1356182_1356404_-	hypothetical protein	NA	NA	NA	NA
WP_031129160.1\|1356520_1357858_-\|capsid	phage major capsid protein	M4WNS1	Mycobacterium_phage	4.3e-81	40.7
WP_031129161.1\|1357866_1358703_-\|head,protease	HK97 family phage prohead protease	W0LP18	Mycobacterium_phage	9.3e-42	40.4
WP_078915371.1\|1358705_1360718_-\|portal	phage portal protein	A0A0U4K705	Arthrobacter_phage	7.7e-143	44.5
WP_031129164.1\|1360659_1360881_-	hypothetical protein	NA	NA	NA	NA
WP_031129165.1\|1360894_1362634_-\|terminase	terminase large subunit	A0A1B3AYP7	Gordonia_phage	1.4e-204	59.0
WP_031129166.1\|1362602_1363058_-\|terminase	phage terminase small subunit P27 family	V9H0V4	Actinophage	1.6e-40	75.2
WP_031129167.1\|1363185_1363560_-	HNH endonuclease	NA	NA	NA	NA
WP_031129168.1\|1363678_1364059_-	hypothetical protein	A0A2P1JT53	Streptomyces_phage	6.8e-16	52.8

DBSCAN-SWA_2

1847786 : 1865566

Streptomyces_phage(38.46%)

terminase,portal,protease,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031129080.1\|1847786_1848878_-	DUF5047 domain-containing protein	Q6VY40	Streptomyces_phage	3.2e-135	69.3
WP_031129079.1\|1848877_1851121_-	hypothetical protein	Q6VY41	Streptomyces_phage	7.1e-230	57.2
WP_051838996.1\|1851125_1854782_-	peptidoglycan DD-metalloendopeptidase family protein	A0A0K1Y5T7	Streptomyces_phage	2.0e-149	51.4
WP_031129077.1\|1854806_1855112_-	hypothetical protein	NA	NA	NA	NA
WP_031129076.1\|1855228_1855588_-	hypothetical protein	Q6VY44	Streptomyces_phage	1.9e-23	55.2
WP_031129075.1\|1855592_1855928_-	hypothetical protein	NA	NA	NA	NA
WP_031129074.1\|1856011_1856779_-	Ig domain-containing protein	A0A2H4PA04	Gordonia_phage	5.0e-26	41.2
WP_031129073.1\|1856833_1857253_-	hypothetical protein	NA	NA	NA	NA
WP_031129072.1\|1857249_1857537_-	hypothetical protein	A0A142K9Z8	Gordonia_phage	3.0e-08	42.5
WP_051838994.1\|1857546_1857900_-	hypothetical protein	A0A2P1JSY3	Streptomyces_phage	1.5e-17	44.9
WP_031129071.1\|1857899_1858454_-	hypothetical protein	A0A2R4A184	Microbacterium_phage	4.0e-09	33.3
WP_140160825.1\|1858443_1858788_-	hypothetical protein	NA	NA	NA	NA
WP_031129069.1\|1858917_1860246_-\|capsid	phage major capsid protein	A0A142K7Z9	Mycobacterium_phage	1.1e-89	45.2
WP_085921361.1\|1860249_1861212_-\|head,protease	HK97 family phage prohead protease	A0A222ZEN8	Arthrobacter_phage	1.4e-46	45.2
WP_031129067.1\|1861195_1863109_-\|portal	phage portal protein	A0A0U4K705	Arthrobacter_phage	2.3e-128	44.0
WP_031129066.1\|1863108_1863339_-	hypothetical protein	NA	NA	NA	NA
WP_051838991.1\|1863363_1865133_-\|terminase	terminase large subunit	A0A1B3B1U6	Gordonia_phage	1.1e-193	58.7
WP_031129064.1\|1865095_1865566_-\|terminase	phage terminase small subunit P27 family	A0A1B3B1V2	Gordonia_phage	2.3e-34	53.4

DBSCAN-SWA_3

1876082 : 1885663

Streptomyces_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051839919.1\|1876082_1876826_-	hypothetical protein	Q6VY73	Streptomyces_phage	1.8e-36	47.1
WP_031135446.1\|1876822_1877752_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_051839921.1\|1877827_1879273_-	DNA methyltransferase	G1BSJ2	Mycobacterium_virus	1.2e-118	49.7
WP_031135450.1\|1879421_1879712_-	WhiB family transcriptional regulator	A0A1D8ERX1	Mycobacterium_phage	2.2e-06	43.4
WP_085921475.1\|1879714_1880299_-	hypothetical protein	A0A2D1GNV3	Streptomyces_phage	8.8e-23	38.7
WP_031135454.1\|1880380_1881091_-	3'-5' exonuclease	Q1WDI5	Streptomyces_phage	7.3e-72	59.2
WP_031135456.1\|1881087_1881603_-	hypothetical protein	A0A1J0MCA1	Streptomyces_phage	7.8e-23	41.6
WP_051839923.1\|1881667_1882738_-	phage recombination protein Bet	A0A142KCW8	Gordonia_phage	7.5e-36	42.6
WP_143660376.1\|1882894_1883191_-	hypothetical protein	NA	NA	NA	NA
WP_150485790.1\|1883183_1883423_-	hypothetical protein	NA	NA	NA	NA
WP_051839929.1\|1883514_1883874_-	hypothetical protein	A0A0M4S3E7	Streptomyces_phage	5.4e-23	49.2
WP_140160862.1\|1883870_1884551_-	hypothetical protein	NA	NA	NA	NA
WP_085921476.1\|1884547_1885663_-	HNH endonuclease	A0A2P1JT47	Mycobacterium_phage	1.0e-19	47.3

DBSCAN-SWA_4

4008069 : 4026260

Streptomyces_phage(72.73%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031132828.1\|4008069_4011555_+	DNA-directed RNA polymerase subunit beta	G8DH04	Emiliania_huxleyi_virus	5.3e-30	22.6
WP_031132826.1\|4011651_4015548_+	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	1.5e-54	27.5
WP_031132824.1\|4015693_4015957_-	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	5.9e-27	78.8
WP_031132823.1\|4015943_4016177_-	hypothetical protein	A0A142K647	Streptomyces_phage	2.6e-18	65.3
WP_031132297.1\|4016450_4017362_-	N-acetylmuramoyl-L-alanine amidase	A0A2P1N078	Streptomyces_phage	1.9e-101	59.3
WP_031132295.1\|4017547_4018993_-	hypothetical protein	A0A1J0MCV7	Streptomyces_phage	1.5e-26	24.8
WP_031132293.1\|4019446_4020163_-	hypothetical protein	A0A1J0MBW3	Streptomyces_phage	2.7e-37	39.3
WP_031132291.1\|4020166_4021273_-	hypothetical protein	A0A1J0MCX4	Streptomyces_phage	2.4e-106	54.2
WP_031132289.1\|4021281_4022484_-	hypothetical protein	A0A1J0MCA6	Streptomyces_phage	3.5e-50	46.4
WP_031132282.1\|4022720_4023656_-	hypothetical protein	A0A1J0MBX9	Streptomyces_phage	3.4e-53	44.0
WP_031132279.1\|4023768_4025064_-	hypothetical protein	NA	NA	NA	NA
WP_031132278.1\|4025060_4026260_-	hypothetical protein	Q8SBP1	Clostridium_phage	8.7e-09	48.4

DBSCAN-SWA_5

5884137 : 5892531

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051839018.1\|5884137_5884596_+	thioredoxin family protein	A0A1J0GW78	Streptomyces_phage	6.3e-08	40.0
WP_051839016.1\|5884681_5886010_+	S8 family peptidase	A0A2K9L5T6	Tupanvirus	1.2e-14	30.7
WP_031129202.1\|5885999_5886992_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.9e-63	45.5
WP_107066988.1\|5887194_5888101_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	8.9e-14	38.4
WP_051839027.1\|5888098_5888959_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_031129197.1\|5889115_5890891_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	3.1e-47	36.0
WP_031129196.1\|5890887_5892531_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	3.6e-29	27.8

DBSCAN-SWA_6

6520445 : 6534656

Bacillus_phage(50.0%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031130337.1\|6520445_6522710_+\|tail	tail protein	J9PVC2	Bacillus_phage	1.6e-48	36.1
WP_031130338.1\|6522745_6523201_+\|tail	phage tail protein	NA	NA	NA	NA
WP_031130339.1\|6523202_6524723_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_031130340.1\|6524719_6525238_+\|tail	phage tail protein	T2KT02	uncultured_phage	5.4e-08	36.1
WP_031130341.1\|6525234_6525423_+	hypothetical protein	NA	NA	NA	NA
WP_031130342.1\|6525426_6526098_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_031130343.1\|6526108_6527290_+	phage late control D family protein	NA	NA	NA	NA
WP_031130344.1\|6527286_6527988_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_031130345.1\|6527984_6528407_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_150485873.1\|6528403_6530602_+	hypothetical protein	NA	NA	NA	NA
WP_031134088.1\|6530598_6532647_+\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_031134090.1\|6532643_6534656_+\|tail	tail protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023696

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection