CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023700	Streptomyces viridosporus T7A strain ATCC 39115 chromosome, complete genome	8 crisprs	csa3,RT,cas2,DEDDh,WYL,cas4,cas3,Cas9_archaeal,DinG	0	3	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023700_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_1

714388-714488

Orphan

Consensus_repeat	Method
CGATGACCGAAGCGCGGCCAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023700_1

>merge|NZ_CP023700|1|714388-714488|CRISPRCasFinder
CGATGACCGAAGCGCGGCCAAGGCCACGAGCGCCCCCACCGGAAAGCCGGATCCTTCTGACAGCGCAGGACAGAAGGTCGATGACCGAAGCGCGGCCAGGG

>NZ_CP023700|1|1|714388-714488|CRISPRCasFinder
CGATGACCGAAGCGCGGCCAAGG	CCACGAGCGCCCCCACCGGAAAGCCGGATCCTTCTGACAGCGCAGGACAGAAGGT
CGATGACCGAAGCGCGGCCAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_026085466.1\|700330_700699_-\|transglycosylase-family-protein	unknown	unknown	gnl\|CDD\|369056
NZ_CP023700.1\|WP_078495467.1\|703323_704778_-\|amino-acid-adenylation	unknown	unknown	gnl\|CDD\|225856
NZ_CP023700.1\|WP_016827868.1\|725181_725643_+\|HIT-family-protein	unknown	unknown	gnl\|CDD\|223611
NZ_CP023700.1\|WP_016827885.1\|706411_708076_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|143508
NZ_CP023700.1\|WP_004992774.1\|715320_716733_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238520
NZ_CP023700.1\|WP_004992742.1\|723967_724540_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004992752.1\|719533_720193_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341362
NZ_CP023700.1\|WP_016827871.1\|720812_721622_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP023700.1\|WP_016827872.1\|720503_720785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004992772.1\|716895_717888_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP023700.1\|WP_106431180.1\|722675_723401_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|319787
NZ_CP023700.1\|WP_106431181.1\|718532_718982_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP023700.1\|WP_016827891.1\|694766_697610_-\|polynucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|197314
NZ_CP023700.1\|WP_106431091.1\|710758_711862_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176235
NZ_CP023700.1\|WP_026085463.1\|712309_712888_+\|fasciclin-domain-containing-protein	unknown	unknown	gnl\|CDD\|367095
NZ_CP023700.1\|WP_026085462.1\|725788_726799_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP023700.1\|WP_016827888.1\|700848_703020_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|132992
NZ_CP023700.1\|WP_026085465.1\|708884_709328_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP023700.1\|WP_016827890.1\|697609_699349_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|378183
NZ_CP023700.1\|WP_039831785.1\|709384_710344_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_026085466.1\|700330_700699_-\|transglycosylase-family-protein	gnl\|CDD\|369056	pfam06737, Transglycosylas, Transglycosylase-like domain. This family of proteins are very likely to act as transglycosylase enzymes related to pfam00062 and pfam01464. These other families are weakly matched by this family, and include the known active site residues.	2.767e-33
NZ_CP023700.1\|WP_078495467.1\|703323_704778_-\|amino-acid-adenylation	gnl\|CDD\|225856	COG3319, COG3319, Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism].	1.03783e-28
NZ_CP023700.1\|WP_016827868.1\|725181_725643_+\|HIT-family-protein	gnl\|CDD\|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	4.19207e-42
NZ_CP023700.1\|WP_016827885.1\|706411_708076_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|143508	cd06841, PLPDE_III_MccE_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme MccE. This subfamily is composed of uncharacterized proteins with similarity to Escherichia coli MccE, a hypothetical protein that is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC). ODC and DapDC are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. ODC participates in the formation of putrescine by catalyzing the decarboxylation of ornithine, the first step in polyamine biosynthesis. DapDC participates in the last step of lysine biosynthesis, the conversion of meso-2,6-diaminoheptanedioate to L-lysine. Most members of this subfamily share the same domain architecture as ODC and DapDC. A few members, including Escherichia coli MccE, contain an additional acetyltransferase domain at the C-terminus.	8.53452e-97
NZ_CP023700.1\|WP_004992774.1\|715320_716733_-\|aminopeptidase-P-family-protein	gnl\|CDD\|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	1.18023e-105
NZ_CP023700.1\|WP_004992752.1\|719533_720193_+\|CBS-domain-containing-protein	gnl\|CDD\|341362	cd04586, CBS_pair_BON_assoc, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the BON (bacterial OsmY and nodulation domain) domain. BON is a putative phospholipid-binding domain found in a family of osmotic shock protection proteins. It is also found in some secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.11232e-40
NZ_CP023700.1\|WP_016827871.1\|720812_721622_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	5.29431e-36
NZ_CP023700.1\|WP_004992772.1\|716895_717888_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	6.39712e-08
NZ_CP023700.1\|WP_106431180.1\|722675_723401_+\|HAD-IA-family-hydrolase	gnl\|CDD\|319787	cd02588, HAD_L2-DEX, L-2-haloacid dehalogenase. L-2-Haloacid dehalogenase catalyzes the hydrolytic dehalogenation of L-2-haloacids to produce the corresponding D-2-hydroxyacids with an inversion of the C2-configuration. 2-haloacid dehalogenases are of interest for their potential to degrade recalcitrant halogenated environmental pollutants and their use in the synthesis of industrial chemicals. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.1186e-50
NZ_CP023700.1\|WP_106431181.1\|718532_718982_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	3.82286e-12
NZ_CP023700.1\|WP_016827891.1\|694766_697610_-\|polynucleotide-adenylyltransferase	gnl\|CDD\|197314	cd09080, TDP2, Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related domains. Human TDP2, also known as TTRAP (TRAF/TNFR-associated factors, and tumor necrosis factor receptor/TNFR-associated protein), is a 5'-tyrosyl DNA phosphodiesterase. It is required for the efficient repair of topoisomerase II-induced DNA double strand breaks. The topoisomerase is covalently linked by a phosphotyrosyl bond to the 5'-terminus of the break. TDP2 cleaves the DNA 5'-phosphodiester bond and restores 5'-phosphate termini, needed for subsequent DNA ligation, and hence repair of the break. TDP2 and 3'-tyrosyl DNA phosphodiesterase (TDP1) are complementary activities; together, they allow cells to remove trapped topoisomerase from both 3'- and 5'-DNA termini. TTRAP has been reported as being involved in apoptosis, embryonic development, and transcriptional regulation, and it may inhibit the activation of nuclear factor-kB. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	1.32943e-49
NZ_CP023700.1\|WP_106431091.1\|710758_711862_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176235	cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.90613e-130
NZ_CP023700.1\|WP_026085463.1\|712309_712888_+\|fasciclin-domain-containing-protein	gnl\|CDD\|367095	pfam02469, Fasciclin, Fasciclin domain. This extracellular domain is found repeated four times in grasshopper fasciclin I as well as in proteins from mammals, sea urchins, plants, yeast and bacteria.	2.79189e-35
NZ_CP023700.1\|WP_026085462.1\|725788_726799_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	4.34068e-59
NZ_CP023700.1\|WP_016827888.1\|700848_703020_+\|TerD-family-protein	gnl\|CDD\|132992	cd06974, TerD_like, Uncharacterized proteins involved in stress response, similar to tellurium resistance terD. Tellurium resistance terD like proteins. This family is composed of uncharacterized proteins involved in stress response, such as the tellurium resistance proteins, chemical-damaging agent resistance proteins, and general stress proteins from a variety of organisms. The tellurium resistance proteins are homologous terA,-D,-E,-F,-Z,-X gene products, which confer tellurium resistance mediated by plasmids. Currently, the biochemical mechanism of tellurium resistance remains unknown. The family also contains several ter gene homologues, YceC, YceD, YceE, for which there is no clear evidence for any involvement in the tellurium resistance. A putative cAMP-binding protin CABP1 shows a significant similarity to the terD protein and is also included in this family.	4.28716e-12
NZ_CP023700.1\|WP_026085465.1\|708884_709328_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	2.20968e-13
NZ_CP023700.1\|WP_016827890.1\|697609_699349_-\|AAA-family-ATPase	gnl\|CDD\|378183	pfam09414, RNA_ligase, RNA ligase. This is a family of RNA ligases. The enzyme repairs RNA strand breaks in nicked DNA:RNA and RNA:RNA but not in DNA:DNA duplexes.	5.44686e-20

>NZ_CP023700.1|WP_026085463.1|712309_712888_+|fasciclin-domain-containing-protein
MRFTRTRTAKATAAAVVALPLALGGLAAQSHAQDASPSPSGTFGPGCSAISQKADTSKDKVVEAAAAYPQLSQLVAAAARANLIGTLDGKPDVTIFAPNNQAFQKVTVSQLDSLLGNQEQLKKVLTYHVVDQQITPNELPKGSFTTVEGSKLTTSGSGTDFKVNDEANIVCGNIKAANATIYIIDTVLQPPS
>NZ_CP023700.1|WP_106431091.1|710758_711862_-|zinc-binding-dehydrogenase
MAWVAASVTVRHDRVVVERVMSAAVLYRHGGMEALGLRTDWPLPAPGPGQVLVRVAAAAMNNTDVWTREGAYGLPGRPEAKAGWRGPLEFPLIQGGDIAGTVSEVGAGVPAKWVGCRVLVDPAFYADGREDAPPVGLLGSERDGGFADYVVVDADRLHDMSASPLSDQELAALPVAYGTAMGMLERAEIRSGETVLVTGASGGVGLALVQLATARGTRVVALTSGSKAAALEEAGASATLPRDADPADLERRLAAVAPGGLDAVADVAGGPWLERLLPALRENGRWVVAGAVAGPVVTFDLRRLYLRNLRLIGSSMHTRTHFAALADLARTGGVRPRIAASFSLSDIHAAQKAFRDGTHVGKITIIP
>NZ_CP023700.1|WP_039831785.1|709384_710344_-|hypothetical-protein
MELFPPIPLAEWRDTKETLHRFAQIVGKVRLAASTRRNHWWNVPFHLTGRGITTRPMGQVDGNPIFTVDFDFVAHQLVLSTLDGREISLPLIGRSVASFHDAVMDSLAALGIRVRLDVPRPFDLPDSGRPFAEDAEHATYDPAQANRYWRVLSQVASVLEEFAAGYSGKVSPVHHFWHTFDIAHSRFSDRHIEQPERIDPVTREAYSREVISFGFWFGDDTFPEPAFYSYTAPEPAHLAEEPLRPAAAHWIARNSSHLAVLRYDEVRTEADPRAAVLAFYESAYRAGARCAGWETEPLACPGGVTDPQLRFREPGPASG
>NZ_CP023700.1|WP_026085465.1|708884_709328_+|VOC-family-protein
MNRDDLPAPIEGLVLTHFLTVSDVPRSRAFYADVLGGTVVLEENPCIIKVANGWIIMNPGGGPTDDKPDVVLRPPDDPHTASSFLNVRVADIHRFYDTAVAKGAEFLTPPIDRRAELRCYMRDPDGYLIEVGQATGLLKGELARTDL
>NZ_CP023700.1|WP_016827885.1|706411_708076_-|helix-turn-helix-domain-containing-protein
MPKQYPPEFRRKVLDLIAAGGRVAQIAADLDISDRTIYTWRRQELIDVGRLPGTTSADNAAPHAVPRRIAEWVSVPRTPLEHLPLEEAGTGSDGAASPAHPAVAPERRPNPSAEASRSLHPETWGLTHTGGALCLEGKALSSLADRWGSPLFVVHGARLAENVRRFQQVPRGRSLGVDVFYSYKTNPVPAVLQRLSRLGVGAEVVSPYELWLALRLGVEPGRIIYNGPGKTPSVVRTLVRSDLLLTHLNHREEIALVARVAAELGKRIDVGLRVATSDSWSGKFGVPIAGGQALAAYEEALAHPSLRVVGLHAHRGVAIEDADTLERFVREVLEFCDALHARLGLDVRLLDLGGSLAVPTVLPLDASPLPLAERVGRRLSIERYLALLVEQVEDHFRRVGRPAPRVLLEPGRALTGNTQMLLCRVNSLNAPGSGPAHAILDAGENIAHILHREYHEIFHAERWGESRSETYTLDGPTCSPMDCLRQTVALPPLRVGDTLAIMDAGAYLVSFSNSFCFPQPGVVVLDQGRERLIRRPETYEDMIARDLHADEAFR
>NZ_CP023700.1|WP_078495467.1|703323_704778_-|amino-acid-adenylation
MRRAPRLAAAGPRGHARRRSAEGTAHAAPCGGAGRPVAPAGSDRRVLRLVARRASHRERARARGGLRHAADAGQAPDARPGTPGPSRTVRRGPRTPRWSASGPVRARATRTRPHSRARLRKKDMPPRPVTPRDIYELRLWQIWSDLLHVDDIGVKDDFFALGGDHAKAEAVLDTMAAQLDAPPLSREMFLEAPTIEGIGCRLRARSRKLCEQPVVPLQPHGSKRPFFFLPSGEGNVYYFHALARRMAPDQPFHALQTRGLHGAEPPFDHVEDMAADHIESMRSVQPRGPYLLGGHCVGAMVALEMALQLQRRGERVALLAAVDGLAPAPFFRDEITEIVQDPFEAMIFFGRGFTSWFDRELPLKRETLLAVEPERRSAFVMERARERSMFTPDEPDDRVSRVVDLGARICRAGYVPEDAYTGPISFFRAHDSALCETATGGWEEVSTQPPRVRELPGDHVTLVLEPHVDRLARELRAAIAEARV
>NZ_CP023700.1|WP_016827888.1|700848_703020_+|TerD-family-protein
MAYRLESLVIRHTHRLPSPRGSAGEGAAAARQFDAALTSVGFKLSAELLERLSGLSEAAVVHTAKRTLRTVSEMVGDHVRHNAYFIDFPANVPDTEEFWMRCVAKALGDDASRENVLTQRAHGVLDLLSLPTYGRYQHTYEEMLAAQDELIASAGDRVTVLHLGRDLDDELTDLYLALAGSTTPLGEEHLRDLKTLAERCAPGPQPETIPIRENRAVVNEARLAVGADLLLDTVTDVLRLACALSGGDVTLQEPTRFRTLPRPVRRALLAGLDTVVAANPAKLADVHAHREPFKRLGERLHPHEYPRWPHAAEVFAVARGEKEARSFDSRAEKLLAERDVLGAVRLLRSAPGKLFRALDLLLRIAADQEGRDAVVAAAVQVAPEVSGRVVLSVREHFQNRERKTDEPRIFVNRRGRGWVTADVRPPVPAADRDRLITALDAEMRRRLPAPGRLLLDPEVLDVALPLSGRATAAGLGVLPRGSVAAVDGERLRFFVYWKQTEHRTDYDLSALLLRADYSTASWLSYTSLRAVGGEHSGDVTEASDGASEFIDLSLDRVRGAYIVPQVNIYAGEGFEEVEESFFGFMLRDGEQKGRPFEPRTVRMKSELRGAGRVALPLVFRREDDGRWRAKWLHLYLKGISYANRVEQNQVSVSKVVRALVEREYLTVRHLVDLMHGDTTAVDLWDGGPVPDEPVTYIGLERPEGLHPDSRVVTLENLRDLIPG
>NZ_CP023700.1|WP_026085466.1|700330_700699_-|transglycosylase-family-protein
MTSRRNAHAGNGFGAHGSRTRTALMVLVTAVVLGTPAQAVASPSIVSGRPDWDAIAACESDGNWQANTGNGHYGGLQFTQSSWVAAGGLEYAPRADLATREEQIAVAERLARLQGMSAWSCA
>NZ_CP023700.1|WP_016827890.1|697609_699349_-|AAA-family-ATPase
MRVPYPRTPHLPWSPGAASDDIRAGDLSGLRGREVVVTEKLDGENTTLYADGLHARSLDSAHHPSRAWVKSLQGRIGAGIPQGWRVCGENLFARHSIAYEDLESWFYGFSVWDGGDRCLDWDRTVRFLRRLGVPVPQVLWRGVFDERALRALRLDTARQEGYVVRTVEGFGRQEFGRRVAKWVRRRHVRTDTHWMHAAVVENALGPNAALWAVRSGAAADVPSLSAALGVAPEDPVAAEAAVADVSARLDVLGRSGDARLEGVLAAMLHSTRRAWLGPRLAGPLGMRGARRVADLVGLAPRLQRPYPDGDRRTGLVRIALAADLGVLHAVAGAVAHTAEAREQVEWSALHAEDAGLLGASPLKPLRAGLQDALAGLGSAAADRCWAEARDAFAEGRVATVDEAVAATWRWRSGDFPRLIHLVGPSGSGKSTFAGKLPRTDSYVCLDELRQARGSRADQRANGDVLREGLDRLDAALAGGGTVVWDATSLNPHQRSLVHGVARRRDALVTHVVALVDEDELARRNDRRAHPVPPAVLTSQLHRFTPPYPAESHRTWYVGAGGTVDDTEGTLNGTVDGGEA
>NZ_CP023700.1|WP_016827891.1|694766_697610_-|polynucleotide-adenylyltransferase
MRTSDEVYHRVRWDPRFDPARFVLGIIQRGAAPKRIPLPSFVPGGDIPWHRVLFVEADGELVWDRATGVDRIDTSDAGRVRTPRLLRAPFFTAGTPYGWEPAEGWRPTDGAPRTAVPSAGSLRVLTWNTLWDRYDSDRIDTARRRPLLLAALEDADADVIALQEVEAGLLALLLRAPWVRAGYTLGTDPGGKDIENSGLLLLSRLPVREAGRHELGPHKAVTAITVETGSGPLVVATTHLSSDHSHNGPARRQAELGRLAEGLGGVDGDLVLVGDFNDGGDGPAAALGLRDAWTEVHGPGDRTPTFDPGVNPLAAVSSLSGRASRLDRIFLRAGQLRATGAFLRGDSPTTDGLYVSDHYGVAADLQLSGTEPTDVLDARPTARTALAWIPPQELWPTLQGIRREHDPQVHRWPPHVNLLFGFVPESDFEQAAPLLAEAAAGTAAFTARLDGVHTFGHRDDATVWLDPAAADEAPWAGLRRALEERFPRCRGRAEGFTPHLTLGRTRDPQRLAAACAARLDGMSARVGELVLLSRRGDEPMRPRATIALGTGDVRWLPDTPGPATTGPAAESEARAALACRTAQRISAALDDGVVHVVGSRRMGCALAGADLDLVAALPGGVDLADVRARVTAALSDGTRVRQVTGARVPGLRLRTGDLDVDLVVVATGTLDPGEAVARRAELDRAAAIALSAVSDADAVRAAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAARTAREATDSAAPDLLRHFFGTWAAWDWRDPVGLAPTGTGPHTPVVLMTPTDPVRNCTGQVGAGFRDLLTDELYRAWTILETAADADTNPWPELLSPPSLHRRHAAWAVLTVRPGPAEEFEETSGRVRGRLRALLTALEDAGAADAYAWPRPFETGPGFVRYAIGLGRTPPDAARLAEISEEWGRGLRGVDVTWAECGTVPTLR
>NZ_CP023700.1|WP_004992774.1|715320_716733_-|aminopeptidase-P-family-protein
MANRRKNGLYPEISAELSALMRTGWADTERHDLQLAEQAPHAARRRAALSARFPGERLVVPSGNLKVRSNDDTYPFRPYTGYVHMTGDQARDGALVLEPRADGGHDAYCYQLPRDSREDDEFWTGAHAELWTGRRRSLAESERVLGLPCRDVRTAAADLAAASGPPTRIVRGIDPSLEAAVTTHPERDAELEEALSDLRLVKDSWELGELRKAVDSTVRGFTDVVRELSGAIASSERWIEGTFFRRARLEGNAVGYGSICAAGEHATIMHWTDNDGPVRPGDLLLLDAGVETHSLYTADVTRTLPISGTFTPLQREIYEAVYEAQEAGMAAVKPGAPYRDFHEAAQRHLTARLVEWGFIEGPVDRAYELGLQRRFTMAGTGHMLGLDVHDCAQARTEDYVDGVLEPGMCLTVEPGLYFQADDLTVPEEWRGIGVRIEDDLVVTENGHENLSAGLPRAADEVEAWMARFAG
>NZ_CP023700.1|WP_004992772.1|716895_717888_+|helix-turn-helix-transcriptional-regulator
MCPMAHSKLGEALRMLGLDHKACRVYLTLLELAPAPLGAIGAAAGLGGAELAAAYGELADAGLASAAAGDGDVVAPVPPAAGLEILARHRAAELEESRIAVKGAFESFRRERLAAYNDNVVEVVTGEAVGPRMRHAWASAREQIRQFESPPYVPLVGATDDALATLARGVTQRVVYSRESLEHPGHLKDVIEPCIEAGEQARVLPSVPVKLLIIDEAYALVSLSIKEADVHNTMLVVQPCGLLSALTALFEQAWQNALPLHGRTTRSAGLPPADRRLLRLLAGGATDDIIARELGISRRTLFRRLQVLMARLGAANRFQMALQAQRSGWL
>NZ_CP023700.1|WP_106431181.1|718532_718982_+|DoxX-family-protein
MSDRLTRHQPLVLGLFRIVLGLLFTSEGAATVFGLLGRKASPVGDWPFWYAGVIELVAGVLVLLGVATRSAAFLSSGIMAFAYFTEHQKDGLFPLQNGGLSPALFCWGFLLLVFFGPGSLSLTAPVRRGGTVPGAARPGGPVPPGPTGP
>NZ_CP023700.1|WP_004992752.1|719533_720193_+|CBS-domain-containing-protein
MKHQKVGDLMSDAVVRVQRGTPFKEIAHLLQDYDITAVPVVDAEDRPVGVVSEADLLQKMWGGDPDEAVGHGEGPRPAGAKASAIDAAGLMTSPAVCAREDWSVVDAARAMARHGIKRLLVVDEGGRLIGLVSRSDLLRVFLRKDRAIRTEIIEEALVRTLGLAPSSMQVEVAHGHVVLSGRLPQDVSVSVLEELCRRVDGVVAVEFRAAGEADGSASA
>NZ_CP023700.1|WP_016827872.1|720503_720785_+|hypothetical-protein
MSAGRAPLPGAITAGLRSDARRAVVGEILRAVLGAVTLHHGLSSAADSAVQASAACGTVATEPASRCCGHTVVHVLFPDESVAPAPQQVCTGL
>NZ_CP023700.1|WP_016827871.1|720812_721622_+|alpha/beta-fold-hydrolase
MGEMINAGGVDIWFERRGRGPDVLLIAGLGDPAEAWQSQFDGLADRYRLTAFDNRGVGRTPLPEGPLSVPHMADDAAALLRALEIPTAHVAGFSGGSFVAQELALRHPGLVRSLVLMSTCARPDAYFRAMARFWHWMAERAPSERAMLEAFFLWVYTPRAHADGTVDRIIEDTLAFPHPQSVDAFQRQIASFADHDTLDRLAEITAPTLVLAGELDIAAPPRLGRVVADRIPGAEFEVLPGEAHQPFQEVPKVFNARVDAFWREVEARD
>NZ_CP023700.1|WP_106431180.1|722675_723401_+|HAD-IA-family-hydrolase
MPRTLSRLLPRPGERAMSEKRWVTFDCFGTLVDWRHGIATGIELVAPGKGWELLDVYNRHEPQVQREHPSMRYSDVLTEALKRTAIEAEIDLLEDDTRVLTAGIPFWPVFPETRQALRELRESGWNLALLTNCDRVIIGETQRRLRVQFDAVVTAEDSGAYKPAHHHFEYFEKSLGVTRDRWVHVAQSYFHDMVPAGELDIARVWINRLHASDDPSIAHAVRPDLSDLAATVNEVHQKLTG
>NZ_CP023700.1|WP_004992742.1|723967_724540_+|hypothetical-protein
MSQRNTFIRSLHDLGLAAWFGGSLMGAVGLNGAAEEEGGTEQVRARISSSGWAKWTPVNAAAIGAHLFGGGGLLAANAHRVATQKGVGASTTVKTAVTAAALAATAYARVLGKKIEMASSPDPQVAEQAEKHPIDINKAQRQLAYVQWAVPALTGGLVVLNALHGEQQRPVEQLHGMWDRARSAAPFMSC
>NZ_CP023700.1|WP_016827868.1|725181_725643_+|HIT-family-protein
MELFAGDPACAFCGIVSGRVPASRVYEDELVLSFMDIHPAAPGDLLVIPKVHAAGLEDIDEALMAHLFRVVHLLARALRRSGLPCEGVNVFLADGEAADQTVFHLHVHVFPRTTDDRFRLEVRWQERSRAALDHDAALIRARLNRGGDRRGTP
>NZ_CP023700.1|WP_026085462.1|725788_726799_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MLADAALTVMWVGLTCYALFGGADFGAGVWDLLAGGAERGRARRELIEHSIGPIWEANHVWLIFVVVMLWSAFSPVFAAVMSTLYIPLTLAALGIIARGAAFAFRKASTELWQQRLFGACFALSSLLTPFFLGTVAGGVASGRVPPGLAEGDVVTGWLNPTSLLGGLLAVVTCAHLAAVYLCADAHREGRPELAAAFTRDAVISGLVAGAVALAGIAVLNADAPELFHGLTHRALPLVIISAVAGLTGLALLTRKRFVAARAAAALAVAAILWAWGAAQYPALLVGSTTVTEAAASASVLSAILVVLGVGAVVLVPSLWLLYATFQRGAVDQHSSR

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Crispr_ID: NZ_CP023700_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_2

2135323-2135438

Orphan

Consensus_repeat	Method
ACACGACGCAGGAGGCCGGTCGATGAGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023700_2

>merge|NZ_CP023700|2|2135323-2135438|CRISPRCasFinder
ACACGACGCAGGAGGCCGGTCGATGAGCGCCAGCACCGGGTTCGGCCGGGGGTCCGGGGGTCGCCCCCCGGGAAAGCACAGCCTCGACACCACGCAGGAGGCCGGTCGATGAGCGC

>NZ_CP023700|2|2|2135323-2135438|CRISPRCasFinder
ACACGACGCAGGAGGCCGGTCGATGAGCGC	CAGCACCGGGTTCGGCCGGGGGTCCGGGGGTCGCCCCCCGGGAAAGCACAGCCTCG
ACACCACGCAGGAGGCCGGTCGATGAGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_016826882.1\|2126839_2127046_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004989892.1\|2136891_2138160_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP023700.1\|WP_004989908.1\|2131701_2132037_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016826878.1\|2130022_2130790_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|236124
NZ_CP023700.1\|WP_004989916.1\|2127223_2127340_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016826872.1\|2139471_2139696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016826870.1\|2144762_2146298_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173799
NZ_CP023700.1\|WP_016826871.1\|2139704_2140694_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP023700.1\|WP_016826877.1\|2132071_2132986_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004989880.1\|2140851_2142480_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|271374
NZ_CP023700.1\|WP_004989889.1\|2138287_2138572_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_CP023700.1\|WP_016826876.1\|2133089_2133362_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_026085304.1\|2128803_2129520_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP023700.1\|WP_016826879.1\|2129497_2129845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_026085305.1\|2127392_2128733_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP023700.1\|WP_004989874.1\|2143168_2144701_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173810
NZ_CP023700.1\|WP_004989911.1\|2130795_2131515_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|273824
NZ_CP023700.1\|WP_150474912.1\|2146414_2147803_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367110
NZ_CP023700.1\|WP_004989879.1\|2142476_2142833_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_CP023700.1\|WP_026085302.1\|2138816_2139215_+\|DUF3099-domain-containing-protein	unknown	unknown	gnl\|CDD\|378630

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_004989892.1\|2136891_2138160_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP023700.1\|WP_004989889.1\|2138287_2138572_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.66218e-07
NZ_CP023700.1\|WP_026085302.1\|2138816_2139215_+\|DUF3099-domain-containing-protein	gnl\|CDD\|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	5.8196e-21
NZ_CP023700.1\|WP_016826878.1\|2130022_2130790_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	1.92916e-174
NZ_CP023700.1\|WP_016826871.1\|2139704_2140694_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP023700.1\|WP_004989880.1\|2140851_2142480_-\|cation-acetate-symporter	gnl\|CDD\|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_CP023700.1\|WP_016826870.1\|2144762_2146298_+\|S8-family-serine-peptidase	gnl\|CDD\|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	5.73006e-58
NZ_CP023700.1\|WP_026085304.1\|2128803_2129520_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.96325e-51
NZ_CP023700.1\|WP_026085305.1\|2127392_2128733_-\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.5372e-130
NZ_CP023700.1\|WP_004989874.1\|2143168_2144701_+\|S8-family-serine-peptidase	gnl\|CDD\|173810	cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.	9.39975e-58
NZ_CP023700.1\|WP_004989911.1\|2130795_2131515_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.63918e-124
NZ_CP023700.1\|WP_150474912.1\|2146414_2147803_+\|hypothetical-protein	gnl\|CDD\|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	9.1441e-41
NZ_CP023700.1\|WP_004989879.1\|2142476_2142833_-\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	2.78029e-33

>NZ_CP023700.1|WP_016826876.1|2133089_2133362_-|hypothetical-protein
MVGPLVSVGTLPCKEIREVVERLVKAGWELRAEGHKATLYCPCEGQCTTIPVPGTPRNAGSAARRIERRAKLCPLPPDDPRRTRRSGVVV
>NZ_CP023700.1|WP_016826877.1|2132071_2132986_-|hypothetical-protein
MACVEYEFQFVVDGVGVDDEAVVDVVHEEFDGLLTRHRDRHLLDVSETGANTIDAAHRIVVRLRRALPGLRLLRIDPDLVGVSDIAERTGRTRQNVQQWVNGERRAGKERFPAPEGVAGRSPVWRWGDVNAWLAGIGEGDGVHVPTREEALQIDYLLPHWRRTLDDGLPLVNVVAAAEYDEYGEGRGAVRKLLEGTLAVPGVLESISAFPRLEQQRLTVVCAVLTDRLDSVVSRIGHDETWAVLAFVGPNGELHLQPLGTREAQGTVPLSRLGLGPDATVGDLLLVQTNGPDRPVAPMTPVGLD
>NZ_CP023700.1|WP_004989908.1|2131701_2132037_-|hypothetical-protein
MVDAFRRQRATEPLATGTLGFVETVRTPDLMGHFPKAGEDLDARTTEILLTREARGGAALLVGRLGAPDAIHGAGARSPRDDPTAAVTCDRRTPETARAEGPPARTPGAAD
>NZ_CP023700.1|WP_004989911.1|2130795_2131515_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MSRSVLVTGGNRGIGLAIARAFAEAGDKVAITYRSGEPPAALAELGCLAVKCDITDSEQVEQAYKEVEEAHGPVEVLVANAGVNKDQLLMRMSEEDFTSVVDTNLTGTFRVVKRANRGMLRAKKGRVVLISSVVGLLGSAGQANYAASKAALVGFARSLARELGSRNITFNVVAPGFVDTDMTRELTEEQQTKILAQVPLARYAQPEEIAATVRFLASDEASYITGAVIPVDGGLGMGH
>NZ_CP023700.1|WP_016826878.1|2130022_2130790_-|enoyl-ACP-reductase-FabI
MSGILEGKRVLITGVLMESSIAFHTAKLAQEQGAEIILTAFPRPTLTERIAKKLPKPAKVIELDVTNDEHLGRLADLVGEELGGLDGVVHSIGFAPQDALGGNFLNTPFESVATAMHVSAFSLKSLTMACLPLMQNGGSVVGLTFDAQYAWPQYDWMGPAKAALEATSRYMARDLGKQNIRCNLISAGPIGSMAAKSIPGFSELASVWDTRAPLEWDLKDPEPAGRGVVALLSDWFPKTTGEIVHVDGGLHAIGA
>NZ_CP023700.1|WP_016826879.1|2129497_2129845_-|hypothetical-protein
MRLSRLIPTAAAVAFVFVLPYEAVAHARAYLAEAQSDDPFGAACRVRVDGSQVTAYCHNPYPDTDHVSLHVECVHWWDLDSDGAPVAAGPAQTVQLTGRCWKEVRTAWVTHRRGD
>NZ_CP023700.1|WP_026085304.1|2128803_2129520_+|FadR-family-transcriptional-regulator
MPLSHPRRSALSEQVIAALRAQITSGEWPVGSRIPTEPELVERLGVARNTVREAVRALAHNGLLDIRQGSGTYVAATSELAGVMHRRFAGADPRHIAELRATLESAAARLAAERRTEKDLKQLDALLLRREEAWESGEAEAFVAADATFHLAVVAASHNDVMTAMYADLGEVLRDWLRGDVGRELTPETRMDHGRLVDAIRAGDGATAAEEAAAYPLACRPGRPGPAGGGRLSPPSGG
>NZ_CP023700.1|WP_026085305.1|2127392_2128733_-|MFS-transporter
MMGFMPTEETRTHESTTVRAQTRPDTPKTRGAGPRAWTTRLLVAGIVLAALNLRPAITSLGALLEEVRDGFGMSGSVAGLLTSVPPLCFAVFGVTAPRLARRFGTGAVVCAGMAAIATGLLVRPFTGGTAGFLTATALALMGIAVSNVLMPVVVKRHFPDRVGAMTGLYSMALALGTAAAAAVTVPLTDAVGGDWRSGLALWAALAVAAVLPWLPFVRERDAAPAERAPGERARGEAPGRAEASAAPAAAPALRITRSRTAWALAVFFGLQATVAYITMGWMPQIFRDAGVPADTAGLLLAVIMVMGVPLAFVIPRLAARLPHQGPIVLVVGASGLAGYAGLYFAPAAGAWAWVLLLGIANCAFPLALTLVGMRAGTGAGVAQLSAFAQSAGYLISIPGPLLVGVLYQHSGGWGLPIALMAGLMVPQTIVGVLAGRARTVEEEAAH
>NZ_CP023700.1|WP_004989916.1|2127223_2127340_-|hypothetical-protein
MPVLDPNPQNGQKKMLLVFGAFFAIFIVIGVIATFLAP
>NZ_CP023700.1|WP_016826882.1|2126839_2127046_-|hypothetical-protein
MSAPTHTRLHPAPRGGADTRLPWWALALPVLAFVTLLALVLNPSDAPAAAGEPALTHLVERAQQLITG
>NZ_CP023700.1|WP_004989892.1|2136891_2138160_+|tyrosine--tRNA-ligase
MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAPSLHVGHLVQVLTLRRLQQAGHRPLALVGGATGQIGDPRPTAERTLNPPETVAGWVERLRGQIEPFLSFEGEGAAEMVNNLDWTQNLSAIEFLRDIGKHFRVNKMLTKDSVARRLESSEGISYTEFSYQLLQAMDFLQLYRRYGCTLQQGGSDQWGNLTAGLDLIHRLEPDATVHAYATPLMTKADGTKFGKTESGAVWLDPEMTTPYAFYQFWLNTDDRDISRYLRILSFRSRAELEELEQQTEERPQARAAQRALAEELTTLVHGADQTAAVIAASKALFGQGELAGLDERTLAAALSEVPHVRVSELGPVVDLFAEVGLVASKSAARRTVKEGGAYVNNAKVTAEDAVPAREDLLHGRWLVLRRGKKNLAAVEVTGA
>NZ_CP023700.1|WP_004989889.1|2138287_2138572_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MGWLWAIIVGFVLGLIAKAVIPGKQHIPLWLSTICGIVGALVGNAIARGFGVAATPGIDWSRHIFQVVAAVVIVFFVDMLYNAMQRRRHQGQRA
>NZ_CP023700.1|WP_026085302.1|2138816_2139215_+|DUF3099-domain-containing-protein
MRKQHGGGSVPVFRITGARAGLQDDVRGRQRRYVISMTIRTVSVILAATLWSVERHVAIVALVLGAVLPYIAVVIANAGRESPPSLPSTFVTTPMKPMIASSPQDEDDAEPDAEGAASGPAPGARTERTERL
>NZ_CP023700.1|WP_016826872.1|2139471_2139696_+|hypothetical-protein
MVPDPETPICSAKGCRAAAVWVLAWNNPKVHTPERRKTWLACEEHREHLSQFLGVRGFLKDVVRFEEWQVPGEA
>NZ_CP023700.1|WP_016826871.1|2139704_2140694_-|GTP-3',8-cyclase-MoaA
MLIDTYGRVATDLRVSLTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIGIAVTGLGIEEVRFTGGEPLLRPGLVGIVERVAALQPRPQMSLTTNGIGLRRTAAALKAAGLDRVNVSLDTLRPDVFKALTRRNRHQDVLDGLHAAREAGLTPVKVNSVLMPGLNEDEAPDLLAWAVEHDYELRFIEQMPLDAQHGWRRDGMITAGDILASLRTRFALTPEGEEARGSAPAERWLVDGGPHRVGVIASVTRPFCRACDRTRLTADGQIRTCLFATEETDLRAALRSGAPDEEIARLWRLAMWGKKAGAGLDDPSFVQPDRPMSAIGG
>NZ_CP023700.1|WP_004989880.1|2140851_2142480_-|cation-acetate-symporter
MSPAITHVQLAANEASEHRPLIITLFALFVIATLGITVWAGRQTKDAADFYAGGRQFSAFQNGLAVSGDYMSAASFLGIAGAIALFGYDGFLYSIGFLVAWLVALLLVAEPLRNSGRYTMGDVLAYRMRQRPVRTAAGTSTIVVSIFYLLAQMAGAGVLVSLLLGITSDAGKVLIVALVGVLMIVYVSIGGMKGTTWVQMVKAVLLIGGTLLITFLVLLKFNFNISDLLGKAADNSGHGAAFLEPGLQYGATGTTKLDFISLGVALVLGTAGLPHILIRFYTVPNAKAARKSVNWAIGIIGGFYLMTIALGFGAAALISRDEIIASNPSGNTAAPLLALHLGGVDSTWGAILLATISAVAFATILAVVAGLTLASSSSFAHDIYANVIRKGKATEKEEMRAARWATVLIGIVSIALGALARDLNVAGLVALAFAVAASANLPTILYSLFWKRFTTQGALWSIYGGLVVAVGLVLFSPVVSGDPTAMFPDVDFSWFPLKNPGLISIPFGFLMGWLGTVLSKEEPDAKKYAELEVRSLTGTGAH
>NZ_CP023700.1|WP_004989879.1|2142476_2142833_-|DUF485-domain-containing-protein
MAAEAPPPSTERHKLPTPEEFTEVQESAEFGELRRSHRSFAFPLTVAFIAWYLLYVLLSNYAGGFMGTELFGNINVAFVFGVLQFVTTFLIAWWYSRHAATKLDPKAEAIKTRMEGGA
>NZ_CP023700.1|WP_004989874.1|2143168_2144701_+|S8-family-serine-peptidase
MAHLRSRRRLALAVPVALSLTASLGFLPAAASAAERTAPAVERATDAPALAYVVNTEVDRRTIASVEKAIAAAGGTVVVTYDRIGVIVVHSANPDFGKEIRKARGVQSAGATRTAPLTRAGTTDVGAADYVTAAEAARTRAASAKTPGSEPLEADQWDLRAIGADKAARINPGSSKVTVAVIDTGVDDTHPDLAPNFSAAQSANCVGGKADTSEGAWRPYTDDDYHGTHVAGEIAAARNGIGVAGVAPGVKVSGIKVSDPDSGLFYPENVVCAFVFAADHGVEITNNSYYVDPWLYNCKDDPDQKAILDAVNRAQLYAQRKGTLHVASAGNSNHDLASDAIEDATSPNDTTPVTRTIDPSECLDLPTQLPGVVTVSATGVHNLKSYYSTYGKGVVDVAAPGGDRRYQLPDTPSKDGRILSTMPNGQYAFLQGTSMASPHAAGVAALLKSKHPWASPAALQAMLKAQADNPGCPESYDQDGDGVQDATCEGGSRVNGFYGFGVVNALRAVK
>NZ_CP023700.1|WP_016826870.1|2144762_2146298_+|S8-family-serine-peptidase
MTASRPRRALVIPAGMAMATALAFLPNTAATAAPTAPPAAGAAASSADATPLSYVVNVRAGHGVPAQVKKAIGKAGGTIVTSYDRIGVVVVHSSNPDFAGAVRKVPGVHSAGATRNAPLPSAATTDTGTPKVLSAAEVAEAGAEAAAGQDPLQGLQWDLPAIKADKAHEKSLGSPEVTVAVIDTGVDDTHPDIAPNFDRAASVNCVSGKPDTSEGAWRPGPSESAHGTHVAGEIAAAKNGVGMTGVAPGVKVSGIKVSNPDGYFYTEAVVCGFMWAAEHGVDVTNNSYYTDPWYFNCKNDPDQKALVEAVTRASRYAEKKGAVNVAAAGNENYDLSADEITDPVSPNDGTPSDRVIDPSECLDIPTQLPGVVTVAATGAKGLKSSFSNYGRGVVDIAAPGGDSTAYQPPQAPATSGLILGPLPGGKWGYMAGTSMAAPHVAGVAALIKSTHPYAPPSLVKALLYAQADATACTDPYDINGDGKVDAVCEGPKNRNGFYGWGMADALDAVTR
>NZ_CP023700.1|WP_150474912.1|2146414_2147803_+|hypothetical-protein
MDPLATAWSALGGDPALLARVSTVERPGALRARLPVRETARACVGACALAAAELGARRAGLAGAPAVRVDDGAVATAFVSERHLRIDGRAPVAFAPLSRFWRTADGWVRTHANYPHHRARLLTALGVPDRPEAVAAALAERSAREAEEAVYAAGGLAVALRTPGEWAAHEQGAAVGRLPLVERGRLDCAPPRACTRVGRDPLLPAAGLRVLDLTRVVAGPVATRTLALLGADVLRVDAPWLPELPDQHADTGFGKRSARLDLVADRSTFEELLATADVVVTGYRPGALERLGPAPAALAERRPGVVVAQLSAWGTRGPWGGRRGFDSLVQAATGIAAVEGSPRRPGALPAQALDHGTGYLLAAGVLRALTEQLDGGGSRIVRVALARTAGWLLDGAADERAGSEGTPGGGGCEEVPADAWLAQRESPLGTLRYALSPVSFAGGPDDWARPPGPWAADPARWG

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Crispr_ID: NZ_CP023700_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_3

3820096-3820218

Orphan

Consensus_repeat	Method
CACCACGCAGGACAACAGCATGCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023700_3

>merge|NZ_CP023700|3|3820096-3820218|CRISPRCasFinder
CACTCCGCAGGACAACAGCATGCCCGCGCCGCCGAAGGACGGGGGCGCCACCACGCAGGACAACAGCATGCCGAGCGAGCCCGCCGCGGGCGAGGCCATCACCACGCTGGACAACAGCATGCC

>NZ_CP023700|3|3|3820096-3820218|CRISPRCasFinder
CACTCCGCAGGACAACAGCATGCC	CGCGCCGCCGAAGGACGGGGGCGC
CACCACGCAGGACAACAGCATGCC	GAGCGAGCCCGCCGCGGGCGAGGCCAT
CACCACGCTGGACAACAGCATGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_016825779.1\|3820463_3821039_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004986725.1\|3825956_3826583_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP023700.1\|WP_016825780.1\|3816895_3819853_+\|AfsR/SARP-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|276938
NZ_CP023700.1\|WP_026085097.1\|3808787_3809906_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP023700.1\|WP_150474943.1\|3821236_3823612_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP023700.1\|WP_016825775.1\|3827242_3827908_+\|pyridoxal-5'-phosphate-synthase	unknown	unknown	gnl\|CDD\|235555
NZ_CP023700.1\|WP_016825774.1\|3827945_3828554_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP023700.1\|WP_016825788.1\|3805019_3806948_+\|membrane-protein	unknown	unknown	gnl\|CDD\|287142
NZ_CP023700.1\|WP_016825783.1\|3813534_3814389_-\|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_CP023700.1\|WP_004986743.1\|3801184_3801940_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377552
NZ_CP023700.1\|WP_004986728.1\|3823822_3824506_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911
NZ_CP023700.1\|WP_016825777.1\|3825421_3825874_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP023700.1\|WP_016825787.1\|3807212_3808769_+\|Na+:solute-symporter	unknown	unknown	gnl\|CDD\|271371
NZ_CP023700.1\|WP_016825781.1\|3816267_3816678_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995
NZ_CP023700.1\|WP_016825776.1\|3826785_3827211_+\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|274679
NZ_CP023700.1\|WP_026085096.1\|3810157_3810709_-\|L,D-transpeptidase	unknown	unknown	unknown
NZ_CP023700.1\|WP_016825778.1\|3824688_3825324_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023700.1\|WP_016825789.1\|3802301_3804860_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP023700.1\|WP_016825773.1\|3828734_3829937_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP023700.1\|WP_016825782.1\|3814708_3816256_+\|phosphoesterase	unknown	unknown	gnl\|CDD\|213987

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_004986725.1\|3825956_3826583_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.81723e-25
NZ_CP023700.1\|WP_016825780.1\|3816895_3819853_+\|AfsR/SARP-family-transcriptional-regulator	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	6.7267e-42
NZ_CP023700.1\|WP_026085097.1\|3808787_3809906_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	5.91215e-39
NZ_CP023700.1\|WP_150474943.1\|3821236_3823612_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.74483e-73
NZ_CP023700.1\|WP_016825775.1\|3827242_3827908_+\|pyridoxal-5'-phosphate-synthase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	2.65944e-55
NZ_CP023700.1\|WP_016825774.1\|3827945_3828554_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.44808e-22
NZ_CP023700.1\|WP_016825783.1\|3813534_3814389_-\|LLM-class-F420-dependent-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	7.51879e-69
NZ_CP023700.1\|WP_004986743.1\|3801184_3801940_-\|hypothetical-protein	gnl\|CDD\|377552	pfam05719, GPP34, Golgi phosphoprotein 3 (GPP34). This family consists of several eukaryotic GPP34 like proteins. GPP34 localizes to the Golgi complex and is conserved from yeast to humans. The cytosolic-ally exposed location of GPP34 predict a role for a novel coat protein in Golgi trafficking.	2.34369e-42
NZ_CP023700.1\|WP_004986728.1\|3823822_3824506_-\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	7.14766e-24
NZ_CP023700.1\|WP_016825777.1\|3825421_3825874_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.18535e-41
NZ_CP023700.1\|WP_016825787.1\|3807212_3808769_+\|Na+:solute-symporter	gnl\|CDD\|271371	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	4.35841e-146
NZ_CP023700.1\|WP_016825788.1\|3805019_3806948_+\|membrane-protein	gnl\|CDD\|287142	pfam10131, PTPS_related, 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein. This domain is found in various bacterial hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. The exact function of the domain has not, as yet, been established.	0.000810577
NZ_CP023700.1\|WP_016825776.1\|3826785_3827211_+\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|274679	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomyces, make F420. The Partial Phylogenetic Profiling algorithm identifies this members of this protein family as high-scoring proteins to the F420 biosynthesis profile. A member of this family, Rv1155, was crytallized after expression in Escherichia coli, which does not synthesize F420; the crystal structure shown to resemble FMN-binding proteins, but with a recognizable empty cleft corresponding to, yet differing profounding from, the FMN site of pyridoxine 5'-phosphate oxidase. We propose that this protein family consists of F420-binding enzymes. [Unknown function, Enzymes of unknown specificity].	4.29712e-10
NZ_CP023700.1\|WP_016825781.1\|3816267_3816678_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	1.88589e-28
NZ_CP023700.1\|WP_016825778.1\|3824688_3825324_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.98377e-08
NZ_CP023700.1\|WP_016825789.1\|3802301_3804860_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	7.15366e-43
NZ_CP023700.1\|WP_016825773.1\|3828734_3829937_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	1.06031e-48
NZ_CP023700.1\|WP_016825782.1\|3814708_3816256_+\|phosphoesterase	gnl\|CDD\|213987	cd07432, PHP_HisPPase, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. HisPPase can be classified into two types: the bifunctional HisPPase found in proteobacteria that belongs to the DDDD superfamily and the monofunctional Bacillus subtilis type that is a member of the PHP family. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	1.15798e-15

>NZ_CP023700.1|WP_016825780.1|3816895_3819853_+|AfsR/SARP-family-transcriptional-regulator
MDGVPRVPEQRRPGSPAEPAALRFSVLGPVRAWRGDEPVNTGSPQQRALLTALLLREGRTATAAELIDALWGEEPPQQALAAVRTYASRLRKVLDPGVLVSESGGYAVRGLGEGALDLAVAQERAAQAEKARNTGDLCHAREVLGRALSLWDGETLAGVPGPYAEAQRVRLEEWRLQLLESRLDMDLDQGCHAEAVSELTALTAAHPLRERLRELLMLALYRSGRQAEALAVYADTRRLLADELGVDPRPDLQELQQRILRADPGLAEPSTPSAEPAAALVRPAQLPATVPDFTGRASFVRELGEVLASASGSEGRVMAVSALAGIGGVGKTTLAVHMAHEARSAFPDGQLYVDLQGTGPRAAEPETVLGSFLRALGTADSAIPDSLEERAALYRSVLDGRKVLVLLDNARDAAQVRPLLPGTAGCAALVTSRVRMVDLAGAHLVDLDVMAPDEALTLFTKIVGEERVASERKAALDVVAACGFLPLAIRIAASRLAARRTWTVSVLAAKLADERRRLDELQAGDLAVKATFELGYGQLEPAQARAFRLLGLADGPDISLAAASAVLDLPPEDTEDLLESLVDTSLLESAAPGRYRFHDLVRLYARACAERDEHPPSEREAALSRLLDFYLATAAGVYAIERPGDRLVDDLEPTEYPGLRFANGSAALDWLYSEASPLLACVRQATEAGRLRRGVDLLWAAKDLTESGANSHQYETTARAMCDATQAAGDARAEGRARTTLTNVLLVYGRIQQAGEEARRAMELAVSVGDATAVSWVANDRGLICLHQGHYSEGETFFNQAIEGHRAAGNRLGEAVTLANLSRAYLELGSVSRAVDIAQHSLALHSELGRPMRRASAHFALGLALAKANRHAEALSQFVDAQGIFTEHRQRLWVGNTHFRMAEVHLSAARPAQAAQHAEQALALGCVGGDRMRGNVVALLGRALSELEQADRAKACWQDALNLYEQCGAVEAAGVRALLNGTPTA
>NZ_CP023700.1|WP_016825781.1|3816267_3816678_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MTPRTPRPSRAERKYRIATAFQRRINPVLRRLPLQTVLETTGRVSGLPRRTPVGGRRTGGSFWLVSEFGERSQYVRNIQADPRVRVRLRGRWHTGTAHLLPDDDPVARLRALPRFNSAAVRTLGAGLLTVRVDLDD
>NZ_CP023700.1|WP_016825782.1|3814708_3816256_+|phosphoesterase
MCEEHRTAQEHRTAIGRRAVFATGTAAAITLGGVSFASAADRDGRGSPGPRETRTVRGTLPPGAPDFVYVPVEVPDGVREIAVAYTYDRPAVPAGTPGNALDIGLFDERGTELGGRGFRGWSGGARTAFFLRADDATPGYLPGPVRAGTWHIALGPYTVAPQGLSYEITVTLTHGEPGQTARPVYPPERAGGRGRAWYRGDCHLHSWHSDGRRTPAEIAALARAAGLDFINSSEHNTHSAHAHWAEAAGDDLLVLLGEEVTTRNGHVVALGTDPGTFVDWRYRARDDRFGRFARQIRRAGGLVVPAHPHATCIGCAWKFGFGEADAVEVWNGPWTPDDEVALADWDGTLVASVRDGRGWIPAMGGSDAHRDPDVVGHPQTVVLADDLSRAAVREGIRAGRSYVAESRHVSLAFTASGGRGEHAGIGERLRVDGDTPVTVRLEVTGAPRCTVRLVTDQGVLHTSAPLPVSGSGVVEWRTTPSYAAYVRAELRHETAAGPLPGALAAFTNPIFLGRR
>NZ_CP023700.1|WP_016825783.1|3813534_3814389_-|LLM-class-F420-dependent-oxidoreductase
MRIAVTIFLTDETITPVRLARELEQRGFAGLYLPEHTHIPVERTTPYPAGGELPREYGRTLDPFVALGQAAAVTERLGVATGITLAAQHDPIDLAKQIATLDHLSGGRFTLGLGFGWNVEEAADHGVQWRTRRELVRDRMGLMRALWTEEPTAYEGEFGSVRASFAYPKPVQKPRGPVVGPRTLIGGAAGPRLFAHLCEYADGWLPIGGRGLSESLPALRSAWADAGRDPAALQVVPYAVLPTPGKLAHFAELGIEETVVQLPPAGEAEVLRALDAYQPFVDAR
>NZ_CP023700.1|WP_026085096.1|3810157_3810709_-|L,D-transpeptidase
MTGLTTGAIAVVAVLAVQADQGAKPTAATSRPSASATADAKPSAESSAEPEAERKPVAVPDGSGTGRRIVYSLGQQRVWLVDASDAARRSFTVWPGTVPPDPGSYTIGTRTEATTGSDGVEIEHILYFTAKSGVSVAFSNAVDGSSPPPPASGARTGGIRVAKADGEALWAFGTAGTTVRVVE
>NZ_CP023700.1|WP_026085097.1|3808787_3809906_-|ADP-ribosylglycohydrolase-family-protein
MGATAGPVWGRREQQDFRSRVRGTLLGAAVGDALGAPVDGLDLDAIRRAHGAGGLADLAPAYGRRGAVTHHTQLTLFSVDGLIRAQVRRDTGAWHPPTDLHRAYLRWATTQRDWGPDERREEDGWLAREEWLYARRDPARALLIGLGDETMGTPAAPKNPAEAGPEAAARSAPFGLLVGWEPQLVAQLAVECAAQTHGRPTACLAAGAYAVIVHALARGEHLDAAVQQTLALLAARPGHEPVSEALQQALGAVRQGVPTPERVTQLVGAATAEGAVAAAVYCALVGEDVRHGLRLSVNHDGPSAATGALTGGLLGALHGETALPPAWLVELEGRPTILELADDFAMEMTQGPALHGPGGSSPAWLARYPRGA
>NZ_CP023700.1|WP_016825787.1|3807212_3808769_+|Na+:solute-symporter
MNSLDWAVLIGYFAVMIAIGIWSHKRVDNVSDFFTAGGRMPWWLSGISHHMSGYSAVMFTGYAGIAYTYGVTSFVTWSFPIALGIAIGSKLFAPRINRLRSRLHVASPLEYLKNRYDLKTQQALAWSGMLLKIVDVGAKWAAIATLLSVFTGVSLNQGILITGAVTAVYCTIGGLWADALTELGQFVIQLLAGLAMLFAVLAELDDHGGFFGAWDEPELQGHGEPLVGPYGTVFLLAFLFIKLFEYNGGMLNQAQRYMATPTPREAERSARLSAVLWLVWPLVLFFPMWMSPLLVDSRKADGSDSYALMTEQLLPHGLLGLVIVGFFSHTMAMCSSDANAIAAVFTRDVAPVLSARARAWGERSGLIAARVTTVVFLGLSMAVATQVDSPTFKDIITVVIKWVAGLMGPIAIPMMLGLLRPFRRSGPTAALTSWATGLLAFWLVNYPIHWSVDGGVPLEYQVSIPLAVSLVLYVLIGYAKPEDTPERLALIERINTDGDGSAAAAVPAQDGAPAPMKD
>NZ_CP023700.1|WP_016825788.1|3805019_3806948_+|membrane-protein
MATAEPTRADDADPGRGTGSGTGPRIRVPDAQHPGDPTAHPQDPTARPEAPTVPAPDGTGGGPRTSRAGAAVLAVRARVLRHPVLSVTALAGLLHVVWFFTFANSGGDLAAQDAWAEFVGRHPDSAYNLAWYGGMHPVSYSVVSPYLMSLLGVRTTMMIAGTVSAGLLTLVLMRSRGVRNPLWAALAGVFALLCNAASGRVTFGLGTMFALGAVAVVFCWPYRWRYKRWAKALCAAPLAALATMASPVAGLFVGLVAVALFFQKRLPGAWALGLAPSAVVAVSAWLFPFSGTQPMGLGSVVLPLLYSVLVVVLVPREWKTVRITSAVYGLGVVLVWLISSQIGSNITRLAMLFAGVALVAALPFAAPRSRKWYAIVVASVFFTGWIGFKSVDDVVHTTPRASWARELAPLVNELQEVGAERGRVEVVPARSHREASALAPYVNLARGWNRQADMERNPLFYDDTLNSANYHAWLKRWGVHFVVLPKDEPDGDGGQRERELVQRGLPYLKQIWGDANWQLFEVSDPTPLAEPDTVVERAEQGGMTLRVEKAGRVLVRIPYSPWLSIVDAEGDKLDPPQETEESKNRPEGAPKTYENVHGCLRETEEDANGDRWTMLLAPKAGTYRLEAPYQWSRGTPCPDELR
>NZ_CP023700.1|WP_016825789.1|3802301_3804860_+|D-alanyl-D-alanine-carboxypeptidase
MAREAASSKNRGSGDTATRVLSVREATEDAAADDASTGGRDDSAAEGAGRLSEAVASWVRPAEPGAGTGGAAESEDGAEDAPADGGKATAQDGAGAGAGTGSDAGDASERATAPAGGPKADDEDDDEDGNKGENRGTDADEGASDASGSEADGPSRGATADAGDAGPGEAVREAPEAGPAPDATGGAEGAADDASHGEDGDEPRGGAPTATGDADDAPEAGPSGDDDASPDADPSTSSPKTAPADRTADGGSASDDADDSDADDDADPSTDSREAGAGAAPEAGGPKADDDDPSDTDTDTDTESGSRTKAEGPVDQPTAVFRTRPPSAPPVDQPTTMLKWGDAGAKATSDSASESKPEAAAERTSKFVALKEFDDPGTRKPPRGEDATTALRTAPPAARPPAPAGATAAPAPQVEPERTTQQPLPPKPPLDLLAELTNTPPPPETPLRTAVRRVKIWTPLVLLLVIVFAIVQNVRPLPAPTLELTAQDSYTFEGDKVDIPWPASGQAALDVQGIGTFGSSGEQKPVPIASVAKVMTAYLVLRDHPLKSGAEGPMIKIDELAEKQSDAGDESTVDVTAGDEISQREAIEAVLIASANNVARLLARWDAGSEEAFVEKMNEAAKDLGMTDTTYTDPSGLNNTTVSTAVDQVKLAKAAMQQPVFREVAAMMSYDDYKGKNWPNWNQLVGSNGVVGIKTGTTTSALGNLVFAAKKEVDGETRLIIGAVVRQPAGGKENTILSAALTSSDLLIRAAQGALESATILKKGTVVGYVDDGLGGRTPVAVTEDVEAVGWAGLSVKLTFAADDDLPHQAEAGTKVGTLTVGDGTSSAVKVPVALQEDLVEPGFTDKLTRVS
>NZ_CP023700.1|WP_004986743.1|3801184_3801940_-|hypothetical-protein
MGRSRRTLPEELLLLALDPTTGTTAQPQSLDLGLAGAQLVELALAGRIAPDGDRIAVVVPRPTGDPTLDCALELLRRRGAPVRAVHWIGGPRLGLRQTYLSHLERCGMVHAVAGQMCGVLPTTRYQATDTEISREIRARLDSAIRTGVPPDPRTAALAALAHAVGLGKHLYPGNEGRSSRSRLRDLIRHDPMGGLVAHAVMDVQNGVAAQPRRSPAAAGRQAPAGGRGATEPARGVPAQPHRGSMARVVAH
>NZ_CP023700.1|WP_016825779.1|3820463_3821039_-|hypothetical-protein
MNPRGNTLKLTAVSALVVLSLTGFSTGRGHGGSGDGGGGCSSSSQNHDSSSGSSGGSHRYDDDDDDDDYYGNGNGNHYDNDYDEGSSGSGGSSGSGNGSSSLQDATVELLSCASKKAPYATVEVTNPNAVTGVFTVTVVFEDASGAKVVSRSQRVEVAGDDTATARVDIDDTGRAPRITDCAPEPLAPATR
>NZ_CP023700.1|WP_150474943.1|3821236_3823612_-|PQQ-binding-like-beta-propeller-repeat-protein
MVDQLTQHDPRRIGPFEVLGRLGAGGMGLVYLARSASGRRVAIKTVRTELAEDQLFRVRFTREVEAARAVSGFYTAAVVDADPRAAVPWLATAYVPAPSLEEIVNECGPLPAQAVRWLAAGVAEALQSIHGAGLVHRDLKPSNVLVVEDGPRVIDFGIASGVSNTRLTMTNVAVGTPAYMSPEQAKDSRSVTGASDVFSLGSTLVFAATGHAPFHGANPVETVFMLLREGPDLDGLPDELRPLIEACMQMEASARPSPADLQAQLAPHLFGSGSDDSGTASAWLPERAVSLIEARRGGRPAPKPAHGGGLSGGGVPPHIPPPPPHDPVVPPPPPSLPAPVGALAGAPDTGPVRLAGAAVPIGPGPRVADVRAAAVKAPPPEAALAASWAKPRPGVNGADPAVPATTAPAAPPEHPAGWRPWRFRMSNDVWGTPAVDGDLVYVTSFEVHALDVATGRRRFKTRDVAWSMAVAEGRIHASDGPTLYALEAREGGDLWRLSTDAWVYSLQADRGTVVTGTRGGGVQAWEASTGRKLWEITGCQTDFESPEAGPAVHDGTVYVWQEARLRALDARTGDERWSYPIGDAASCGGVPIRLTHASDGYVYVSAGTRVIALDVAGGHVRWHFEAPAVFLSPPAFVPGPAVTGGGVYLADYLGTVYALDATDGRDRWRIATESRASVEPVLVAAGHVHVGSGKGLYTLDAVTGTPKWRFQSGGDIVGSPAVAEGRIHFGSTDHLLYTLKADDGRLRWKLATGGEITGSPVVRDGVVYACSKDRCVYALDAEKGTGTARTA
>NZ_CP023700.1|WP_004986728.1|3823822_3824506_-|VOC-family-protein
MDAQLPDVEAGKRFYGELFGWSFQDQPARSPGAVRALKGGEPVASLAHKTDGRMPTVWTVSFATPDAEALCGRIRAAGGQIVSAPLPVGELGVAALVTDPGGAVFGLWQPVGHPGFGRRREPGTFAWVELYTRDTEAANAFYGDLFHDALFGPGADPDFGRAPISDVFPAEMPPHFLVHFAVEDPAATMERVTRLGGRVQVPPFETSYGTAAVVTDDQGASFALLRR
>NZ_CP023700.1|WP_016825778.1|3824688_3825324_+|TetR/AcrR-family-transcriptional-regulator
MRTVDGRVAGRRGQATRQKLLDCLSEMLSSSPYRDVKVIDVARKAGTSPATFYQYFPDVEGAVLEIAEQTAADSAGLTELLEGRSWVGKAGWQTAQELVDGFLEFWRKNDAILRVVDLGAAEGDKRFYKIRMKVLNSVNASLADSVAALQAKGRVDKDVNPAAVAGALVTMLAAAASHQKGFSSWGVKQAELKPNLALLVHLGVTGKKPTR
>NZ_CP023700.1|WP_016825777.1|3825421_3825874_-|Lrp/AsnC-family-transcriptional-regulator
MDDMDRKILAELQQDGRLTVTELAARVRLSVSPCHRRLRELERSGAISGYRAVVDPAAVGLTFEALVFVSMRQEDRDTVAEFERAVGEVEEVLEAQRLFGEPDYLLRVVAADLAAYQRLYDERLATLPGVQRLTSTLVMKHVVKDRPLPA
>NZ_CP023700.1|WP_004986725.1|3825956_3826583_+|LysE-family-translocator
MDTTALLSFLALDLMLVCVPGADWAYTISAGLRGRSVVPAVGGLVAGYALHTVLAAAGLAVLVAGSPALLTALTVAGAGYLVWLGWSVLRRPGAPAADGAAEEENGVRAFRRGAAISGLNPKGLLLYLSVLPQFLVTGDGARLPVPAQTAVLGLLHMACCAVVYLSVGLAARAVLGTRPAAARAVVRTSGAAMLGIGAFLLVQRLAVL
>NZ_CP023700.1|WP_016825776.1|3826785_3827211_+|pyridoxamine-5'-phosphate-oxidase
MALTREEREQFLAEPHVAALAVDAGPGRAPLTVPIWYQYAPGGDVWIMTGLDSRKNKLIGAAGRFSLMVDRTEPTIRYVSVEGPVLETVPATIELLREISARYLPADKVEGYVDFAWKNHGEQVVVRMRPEHWVSSDLGSV
>NZ_CP023700.1|WP_016825775.1|3827242_3827908_+|pyridoxal-5'-phosphate-synthase
MGTDLHELLRSLRVWDPEVTELPALDPAAAPAEPLPLFTRWLAEVAAAGQREPHTMSLATADADGLPDVRIVMLHGADADGWSFATHAHSRKGGHLAVRPYAALAFHWPALGRQVRLRGPVATAPAEEAQADLHARSTGALAAALTGRQSDLLGSVEELARASDEAWERARREPDAPAPSWTLYRLRPDEVEFFQGDARRRHVRLRYRRTGEGWARELLWP
>NZ_CP023700.1|WP_016825774.1|3827945_3828554_-|GNAT-family-N-acetyltransferase
MAHPRRRTRPLPELHGLGLHLRPWDPSSRDDVETWLRGITDPEFQRWNTPLRPITDLATARESLRRGTRHDLEGTGASFRIADAGSGAALGHLGVNDIHPVMRLGRVGYWVLPEARGRGVATRALLLVARWALSERGLHRLELSHALGHGASCRVAERCGFAYEGIMRGAIFEAGRHDAFRDAHLHARLATDPEPPAPVPPV
>NZ_CP023700.1|WP_016825773.1|3828734_3829937_+|NAD(P)/FAD-dependent-oxidoreductase
MTDSTTSARPTAPHPADRPVYVVGGGPGGLSVAYALRARGIRAVVLERSDRVGASWRRHYDRLRLHTTRRLSALPGLPMPRRFGRWVSRDDVVRYLEKYAEHHRLEIVTGVEVSRVERTADGTGWLLHATGGRELTGAAVVVATGYNHTPRVPDWPGLDTYTGEFLHACAYRNARPFAGRDVLVVGVGNTGAEIAVDLVEGGASRVRLAVRTPPHIVRRSTAGWPAQYSGVLMRRLPVGLVDRLSRVQAKVALPDLSDRGLPRPGPGLYSRVLEGAIPVQDVGLVDAVRTGAVEVVGAVERFEDGEVVLAGGDRIAPEAVVAATGYVRALEGLVGHLGVLDHRGRPVVHGARTPDGAPGLHFTGFTNPISGTLRELALDARRIAGAVARDGAPGVSRLPR

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Crispr_ID: NZ_CP023700_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_4

4255091-4255212

Orphan

Consensus_repeat	Method
CGCCGCCCTGCTGCTGGCCACCG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023700_4

>merge|NZ_CP023700|4|4255091-4255212|CRISPRCasFinder
CGCCGCCCTGCTGCTGGCCACCGGCGGGAGCGCCGGTCGCCCAGGGGTCGTCGGCGGGAGCGCCGCCCTGCTGCTGGCCGCCGCCGGGGCCTCCGCCCCAGCCGCCGCCCTGCTGGCCGCCA

>NZ_CP023700|4|4|4255091-4255212|CRISPRCasFinder
CGCCGCCCTGCTGCTGGCCACCG	GCGGGAGCGCCGGTCGCCCAGGGGTCGTCGGCGGGAG
CGCCGCCCTGCTGCTGGCCGCCG	CCGGGGCCTCCGCCCC
AGCCGCCGCCCTGCTGGCCGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_004985996.1\|4250860_4252336_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP023700.1\|WP_004986010.1\|4245362_4246229_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|380091
NZ_CP023700.1\|WP_026085045.1\|4249247_4250633_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP023700.1\|WP_016825502.1\|4246850_4248059_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP023700.1\|WP_016825491.1\|4265704_4266967_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP023700.1\|WP_004986009.1\|4246326_4246746_-\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
NZ_CP023700.1\|WP_004985979.1\|4256293_4256608_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004985967.1\|4263814_4264498_+\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP023700.1\|WP_016825496.1\|4252795_4254133_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240541
NZ_CP023700.1\|WP_016825492.1\|4260733_4263130_-\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP023700.1\|WP_004985983.1\|4255683_4255974_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_CP023700.1\|WP_026085044.1\|4259125_4260634_-\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|227937
NZ_CP023700.1\|WP_026085043.1\|4267088_4267592_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP023700.1\|WP_003949403.1\|4254755_4254992_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP023700.1\|WP_004985973.1\|4257977_4259009_+\|alanine-racemase	unknown	unknown	gnl\|CDD\|376473
NZ_CP023700.1\|WP_004985976.1\|4256772_4257894_+\|peptidoglycan-bridge-formation-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_CP023700.1\|WP_016825501.1\|4248199_4248664_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP023700.1\|WP_004985988.1\|4254290_4254737_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP023700.1\|WP_004985963.1\|4264542_4265625_+\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
NZ_CP023700.1\|WP_004986006.1\|4248721_4249174_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_004985996.1\|4250860_4252336_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP023700.1\|WP_004986010.1\|4245362_4246229_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|380091	pfam18014, Acetyltransf_18, Acetyltransferase (GNAT) domain. This entry represents a likely acetyltransferase enzyme that is related to pfam06852.	5.37988e-27
NZ_CP023700.1\|WP_026085045.1\|4249247_4250633_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.5919e-55
NZ_CP023700.1\|WP_016825502.1\|4246850_4248059_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	6.28222e-98
NZ_CP023700.1\|WP_016825491.1\|4265704_4266967_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.54716e-38
NZ_CP023700.1\|WP_004986009.1\|4246326_4246746_-\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	2.14652e-31
NZ_CP023700.1\|WP_004985973.1\|4257977_4259009_+\|alanine-racemase	gnl\|CDD\|376473	pfam01168, Ala_racemase_N, Alanine racemase, N-terminal domain.	3.63342e-09
NZ_CP023700.1\|WP_016825496.1\|4252795_4254133_+\|MATE-family-efflux-transporter	gnl\|CDD\|240541	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.34698e-112
NZ_CP023700.1\|WP_016825492.1\|4260733_4263130_-\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	5.42801e-146
NZ_CP023700.1\|WP_004985983.1\|4255683_4255974_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	4.89043e-41
NZ_CP023700.1\|WP_026085044.1\|4259125_4260634_-\|DUF2029-domain-containing-protein	gnl\|CDD\|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	3.72211e-43
NZ_CP023700.1\|WP_026085043.1\|4267088_4267592_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00154703
NZ_CP023700.1\|WP_003949403.1\|4254755_4254992_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	9.24137e-38
NZ_CP023700.1\|WP_004985967.1\|4263814_4264498_+\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	6.82548e-20
NZ_CP023700.1\|WP_004985976.1\|4256772_4257894_+\|peptidoglycan-bridge-formation-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	1.20033e-34
NZ_CP023700.1\|WP_016825501.1\|4248199_4248664_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.64307e-15
NZ_CP023700.1\|WP_004985988.1\|4254290_4254737_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	3.33511e-65
NZ_CP023700.1\|WP_004985963.1\|4264542_4265625_+\|inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NZ_CP023700.1\|WP_004986006.1\|4248721_4249174_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.59332e-19

>NZ_CP023700.1|WP_003949403.1|4254755_4254992_-|30S-ribosomal-protein-S18
MAKPPVRKPKKKVCAFCKDKVTYVDYKDTNMLRKFISDRGKIRARRVTGNCTQHQRDVATAVKNSREMALLPYTSTAR
>NZ_CP023700.1|WP_004985988.1|4254290_4254737_-|50S-ribosomal-protein-L9
MKIILTHEVSGLGAAGDVVDVKDGYARNYLVPRKLAIRWTKGGEKDVEQIRRARKIHEIQTIEQANQVKAQLEGVKVRLAVRSGDAGRLFGSVTPADIASAIKAAGGPEVDKRRIELGAPIKTLGAHETSVRLHPEVAAKVNVEVVAA
>NZ_CP023700.1|WP_016825496.1|4252795_4254133_+|MATE-family-efflux-transporter
MTQAPARPRAARRQHDREIVLLAVPAFGALVAEPLFVMADSAIVGHLGTAQLAGLGIASALLMTAVSVFVFLAYATTAAVARRVGAGDLQGAIRQGMDGIWLALLLGAAVIAVVLPTAPGLVDLFGASETAAPYATTYLRISALGIPAMLVVLAASGVLRGLQDTRTPLYVAVAGFLANAVLNVGLVYGAGLGIAGSAWGTVIAQCGMAAVYLTVVLRGARKHGASLRPDSAGIRASAQAGVPLLVRTLSLRAILMITTAVAARLGDADIAAHQIILSLWSLLAFALDAIAIAGQAIIGRYLGAGDAQGAREACRRMVEWGIAVGVVLGVLVVLARPVLLPLFTSDATVKDAALPALVLVALSQPICGIVFVLDGVLMGAGDGPYLAWAMLLTLVVFTPAALLVPVLGGGLTALWGTMTLMMSVRMLTLWLRSRSGRWVVTGATR
>NZ_CP023700.1|WP_004985996.1|4250860_4252336_-|replicative-DNA-helicase
MSISEPLDDPWADSGPSDRLPASRREGGGRGRDEQHDRGRDSGVWDGGGSAFERMPPQDLEAEQSVLGGMLLSKDAIADVVEILKGHDFYKPAHETVYTAILDVYAKGEPADPITIASELTKRGEINKVGGASYLHTLVQTVPTAANAAYYAEIVHERAVLRRLVEAGTRITQMGYAADDDVDEIVNRAQAEIYAVTEQRTSEDYLPLGDIMEGALDEIEAIGSRSGEMTGVPTGFTDFDSLTNGLHPGQMIVIAARPAMGKSTLALDFARAASIKHNLPSVIFSLEMGRNEIAMRLLSAEARVALHHMRSGTMTDEDWTRLARRMPDVSAAPLYIDDSPNLSMMEIRAKCRRLKQRNDLKLVIIDYLQLMQSGGSKRAESRQQEVSDMSRNLKLLAKELEIPVIALSQLNRGPEQRTDKKPMVSDLRESGSIEQDADMVILLHREDAYEKESPRAGEADLIVAKHRNGPTATITVAFQGHYSRFVDMAQT
>NZ_CP023700.1|WP_026085045.1|4249247_4250633_-|serine-hydrolase
MTTLQEELLPGTRRALLHRIAVAQAEGRAPSLVATVVRGGEAVWTGARASAEGRAPDGNVQYRIGSITKTFTAVLVLRLRDEGVLDLGDPLEEHLPGTGAGEATIAELLAHSGGLAAETPGPWWERTPGTLRPDLADVLGERPFVHPVGRRFHYANPGYALLGALVEKVRGASWEEVLRREVLEPLGLRRTSVHPEAPHAEGWAVHPWADVMLPEPVEDLGRMAPAGQLWSTTDDLARFAAFLVGGDDRVLSAESLREMRTPAAPMGTADVASGYAYCLGLEIRHQDGLTLVGHTGSLPGFLACLVISLVDDVAAVVLANCTSGPAPFTVAADLVRIVAEAEPRIPAPWRPLRDAEPAVLELVGQWYWGTQAFALRWSADGGVSLEPLSGIGRRSRFRSNGDGTWTGLEGYYAGELLKPVRRPDGSVSHLDLGSFVFTRQPYDERAPVPGGVEPGGWRGIR
>NZ_CP023700.1|WP_004986006.1|4248721_4249174_+|GNAT-family-N-acetyltransferase
MGDLDIRAAVAADIPAIVGMLADDPLGAQRESPDDLGPYLAALERLSTDPNQNLVVAVRGDRVVGTLQLTIVPGLSRRGATRSIIEGVRIHADERGSGLGTRLIEWAIDASRRHGCHLVQLTSDNTRTDAHRFYERLGFTASHVGFKLQL
>NZ_CP023700.1|WP_016825501.1|4248199_4248664_+|MarR-family-transcriptional-regulator
MTATDPALTALAQGWCALSLLHRKIETHIERALQARHDLSAREYSLLDVLSRQHDGEGGHLQMKQVADAVVLSQSATTRLVTRLEDRGLLERYLCPTDRRGIYTNVTESGLKLLEEARPTNDTALREALDEAAENPELAPLVRAVETLKAPVPA
>NZ_CP023700.1|WP_016825502.1|4246850_4248059_-|MFS-transporter
MPLALLALAIGAFGIGTTEFVIMGLLPEVAGDFGVSIPTAGHLVTGYALGVVFGAPLMTVLGTKVSRKRMLMLLMGLFIAGNLLSALAPVFGVMLIGRVVASLAHGAFFGIGSVVAADLVAPDKKAGAIAMMFTGLTVANVIGVPLGTLIGQSIGWRVTFGIVAALGLVGLAGIARLVPDMPKPEGVRLRHELAAFKNVQVLLAMAMTVLGFGGVFAAITYIAPMMTHVAGFADGSVTWLLVLFGLGMVGGNLIGGRYADRALMPMLYVSLGALAVVLALFTLTAHNKIVAAVTIALIGALGFATVPPLQKRVLDQAHGAPTLASAVNIGAFNLGNALSAWLGGIVIAAGLGYTAPNWVGALLAASALALAFVSAALERRDQVTGSVPAGSVPAEERTAVSP
>NZ_CP023700.1|WP_004986009.1|4246326_4246746_-|heme-binding-protein
MSTIAVAPLTIADADTLITAAHRAAEATGVTVSVTVLDAGGNLLAFRRDDRAVLISGETSTRKAYTALQLDAPTADLVDAVQPGGLFHTLPTALDRPLLFIAGGVPIRRDGRLIGAIGVGGGAPEQDHAFATSAVETLA
>NZ_CP023700.1|WP_004986010.1|4245362_4246229_+|GNAT-family-N-acetyltransferase
MPTPSLASLPIRRLTLRDLTACADLSEDRGWPREEHKWGLLLSAGKGYGIDDPEGGLVTACVVTEYGPQERPALGAIGMVLVAERHARQGVGRRLMRHVLSSMGTTPLTLYATPYGRPLYEELGFKVTGRAEMLRGRFVPTGAQHEVATRAATAEDLPAILRLDEEVFGTDRTHVIARLPAFADRLRVAEEDGRLIGYAAAWPNMDTHVVGPLIARDTPTAQALLASLAAHTDRPLRIDIDVRHEELLGWVKEHGLASVTSHAVMTYGITELPGDGGRRFAPVTVAAG
>NZ_CP023700.1|WP_004985983.1|4255683_4255974_-|30S-ribosomal-protein-S6
MRHYEVMVILDPDLEERAVSPLIENFLSVVRDGGGKVEKVDTWGRRRLSYEIKKKPEGIYSVIDLQAEPAVVKELDRQMNLNESVLRTKVLRPETH
>NZ_CP023700.1|WP_004985979.1|4256293_4256608_+|hypothetical-protein
MAQAMRPNTAGGLFATDGKSHPLQDALLAVTLVLGITSFITAMFHHLHLLSSWTGLVGILTGAYGQWISVTTRERFGLVLGLGAAAVGFFLGMAHGGLFGGLLD
>NZ_CP023700.1|WP_004985976.1|4256772_4257894_+|peptidoglycan-bridge-formation-glycyltransferase-FemX
MSLTLRTISREQHLAYIQSLPSASHMQVPAWADVKAEWRSENLGWFDDRTGEMVGAGLVLYRQLPKIKRYLAYLPEGPVINWFAPNLQEWIEPMLAHLKQQGAFSVKMGPPVIIRRWEASTIKKGIQDPDVKRLRDLEADFIEPRAFEVSDKLRRMGWQQGEDGGAGFGDVQPRYVYQVPLANRSLEEVHKNFNQLWRRNIKKAEKAGVEVVQGGYEDLAEWQRLYEITAVRDHFRPRPLSYFQRMWTALNTEDPNRMRLYFARHNGVNLSAATMLIVGGHVWYSYGASDNIGREVRPSNAMQWRMLRDAYALGATVYDLRGISDSLDETDHLFGLIQFKVGTGGQAAEYLGEWDFPLNKLLHKALDIYMSRR
>NZ_CP023700.1|WP_004985973.1|4257977_4259009_+|alanine-racemase
MALTLYVDTARWRAHHKHVQEQFPGLVPVCKGNGYGFGHERLAEEATRLGSDVLAVGTTYEAARIKDWFSGDLLVLTPYRRGEEPVPLPDRVIRSVSSVDGVYGLVGARVVIEVMSSMKRHGISEQDLPQLHAAIENVRLEGFAIHLPLDRTDGSDAVEEVIGWMDRLRAARLPLHTMFVSHLKADELARLQQQFPQTRFRARIGTRLWLGDHEATEYRGAVLDVTRVAKGDRFGYRQQKAASDGFLVVVAGGTSHGVGLEAPKALHGVMPRAKGVARAGLATVNRNLSPFVWGGKQRWFAEPPHMQVSILFVPTDAPEPKVGEELVAHLRHTTTQFDRLIDR
>NZ_CP023700.1|WP_026085044.1|4259125_4260634_-|DUF2029-domain-containing-protein
MCDMPSGESTQASDHEPEPVRPTQEDRVAAAGSELIGGPLGRRALTGASWWSPVRVIALVAIGMFALGLVQKAPCYNGGWFFGAGSQYTHACYSDIPHLYQGRGFADGLVPYFDKLPGDMQYLEYPVLTGVFMEVAAWLTPGSGSLQDQAQWYWMANAGMLMACAAVIAVCVTRTHARRPWDALLVALAPAFALTATINWDLLAVALTAAAMLMWSRGRSLAFGVLLGLATAAKLYPVLLLGPLLVLCWRAGRWREYGKALGGAVVAWAVVNVPVMLFAFEGWSKFYTFSQERGVDFGSFWLIMAQNSSDPLGTETVNTFATLLMLLCCAGVAVLALTAPRRPRFAQLAFLIVAAFILTNKVYSPQYVLWLVPLAALARPKWRDFLVWQACEVAYFLGIWMYLAYTTSGDAHKGLPTDGYHWAIALHLLGTLYLCVMVVRDILMPERDPVRRSGEDDPSGGVLDGAEDVFVLGPAARPARHAVHFEGPRVKWGTTGATGSSL
>NZ_CP023700.1|WP_016825492.1|4260733_4263130_-|penicillin-binding-protein
MIDYPRYGKDGWRRWMPSWKLVSGLCIGFFGSLVAVAGIGYAMVEVPNLALTATAQNNVYYWSDDSPMVATGGERNRQIIGLEQIPKDMRNAVISQENKTFYSDSGIDPKGIARALFNMARGGNTQGGSTITQQYVKNAMLDDQSQTISRKFKEIFVSIKVGTTEPKDKILEGYLNSAYYGRGAYGIQAASRAYFNKDAKDLDAGECALLAAVLKGATYYDPAGASSIDRVEATPEKNRARALRQMQDTLDKMVEYDRLSAEERAKHTKLPKWQNPRSNTALSGQIGYLVDLAKAYIINNSEETGITEADLAKGGYSIYTTFDKEKVEELEKSIKKVYKKNIKPEERPDTDTHVQFGGASVDPATGAIKAIYGGEDATKHFTNNADETGAQVGSTFKPFVLAAAMKWGVRDPDLDPVQAQDERTLVSPKSLYNGKNRLKIREYNGNVWQNEKGEQWEQVNDGDQTYGTPPDYKIDLREAMRYSVNSSFVQLGMDVGLDKVKEAAVDAGVLESSLAGTDYPSFSIGTSNPSAIRMAGAYATFAASGKQREPFSVKRVTSKNGTIFTHKTVTEQAFTAKVADNITDVLKTVVEEGTGSNAQLDGREVAGKTGTTDGNKSAWFVGYTPQLSTAISMFRYPDDETIKNRQFLKMFGTGGQKKIHGSSFPSEIWADYMGNALKGQPAKKFPIPEPIGVIINDDPTPTPTPTPTETEEATPSTSPTPTETETTPSPTASNTCRPFDFRCKDDDDTGGTGTGGTDIGGTDGGVTGSPTPTDTDEPGENRGNGNNNGGGLFGGPGS
>NZ_CP023700.1|WP_004985967.1|4263814_4264498_+|PadR-family-transcriptional-regulator
MSRRSGILEFAVLGLLRESPMHGYELRKRLNTSLGVFRAFSYGTLYPCLKTLVANGWLIEEPGNTAEDAPAAPLTGRRAKIVYRLTAEGKEHFEQLLSQTGPDAYEDETFAARFAFFGQTSRDVRMRVLEGRRSRLEERLEKMRASLARTRERLDDYTLELQRHGMESVEREVRWLNELIESERAGRDLKGSATGGSAQQDTTSGATGGLPRPGDDPRPDTPDDTAT
>NZ_CP023700.1|WP_004985963.1|4264542_4265625_+|inositol-3-phosphate-synthase
MGSVRVAIVGVGNCAASLVQGVEYYKDADPASKVPGLMHVQFGDYHVRDVEFVAAFDVDAKKVGLDLADAIGASENNTIKICDVPRTGVTVQRGHTLDGLGKYYRETIEESAEAPVDVVQVLKDKQVDVLVCYLPVGSEDAAKFYAQCAIDAKVAFVNALPVFIAGTKEWADKFTEAGVPIVGDDIKSQVGATITHRVMAKLFEDRGVILDRTMQLNVGGNMDFKNMLERDRLESKKISKTQAVTSQIPDRELGEKNVHIGPSDYVAWLDDRKWAYVRLEGRAFGDVPLSLEYKLEVWDSPNSAGVIIDALRAAKIAKDRGVGGPILSASSYFMKSPPVQYFDDEARANVEKFIQGEVER
>NZ_CP023700.1|WP_016825491.1|4265704_4266967_+|MFS-transporter
MAVVRDLRILLRFQGFRRLLAVRLLSQGADGVFQVALAAYVVFSPEKQTSAAAIASAMAVLLLPYSLVGPFAGVLLDRWRRRQVFLYGNLLRALMAAVTAVLILGRVPDWLLLLSALCVTAVNRFVLAGLSAALPRVVDAERLVIANSLSPTAGTLAATAGGGLAFLVRLVIADSDAAVVLVGAALYLCAAGASLRIAKELLGPDRALAHPRLTTVLTGTARDLLAGLRHLAAPPRREAAWALTAMSLMRFCYGAMLVMLLMLCRYALTSSTDEGIALLGLALGVSGAGFFVAAVMTPWAAGWLGPGRWIMVCSGSAAVLEPALGLPFASGPLLAGAFVLGLTTQGAKIATDTIVQSSVDDGFRGRIFSLYDVLFNVAFVGAAAVAALMLPPDGRSVPLVITVAVVYGAVAVAMARFERR
>NZ_CP023700.1|WP_026085043.1|4267088_4267592_+|hypothetical-protein
MTTPPPQGNPFAQSQQQPHDQSQGQAPYPPQGGFPQQAGQPGFPPPGAPVPPEQPRRKLSFKTIKNIVIAVVVAGVAIGGFIASRDDANTAAVGDCMSRGSTDDNDPDLEVVDCGSSTAQYTVLAKVEGNFSGITAQSKCEAASKDFQYVYTETNGSKSFLLCLKDK

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Crispr_ID: NZ_CP023700_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_5

4908214-4908285

Orphan

Consensus_repeat	Method
TCCGGCCACCGCCCCGGTCACCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023700_5

>merge|NZ_CP023700|5|4908214-4908285|CRISPRCasFinder
GCCGGCCACCGGTCCGGCCACCGCCCCGGTCACCGATCCGGCCTCCGGTCCGGCCACCGCCCCGGTCACCGA

>NZ_CP023700|5|5|4908214-4908285|CRISPRCasFinder
GCCGGCCACCGGTCCGGCCACCGC	CCCGGTCACCGATCCGGCCTCCGG
TCCGGCCACCGCCCCGGTCACCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_016825037.1\|4912333_4913833_+\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NZ_CP023700.1\|WP_004984583.1\|4914080_4914944_+\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235102
NZ_CP023700.1\|WP_016825044.1\|4900291_4901647_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|379374
NZ_CP023700.1\|WP_016825038.1\|4910762_4912337_+\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|273903
NZ_CP023700.1\|WP_150474957.1\|4904491_4905940_+\|NADH-quinone-oxidoreductase-subunit-C	unknown	unknown	gnl\|CDD\|376317
NZ_CP023700.1\|WP_016825043.1\|4901918_4903139_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP023700.1\|WP_004984601.1\|4903401_4903809_+\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|169084
NZ_CP023700.1\|WP_026084955.1\|4897113_4899042_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274738
NZ_CP023700.1\|WP_004984581.1\|4914940_4915336_+\|YccF-domain-containing-protein	unknown	unknown	gnl\|CDD\|236975
NZ_CP023700.1\|WP_004984592.1\|4906904_4907576_+\|NADH-quinone-oxidoreductase-subunit-I	unknown	unknown	gnl\|CDD\|235637
NZ_CP023700.1\|WP_004984610.1\|4896071_4897121_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|237006
NZ_CP023700.1\|WP_016825042.1\|4903799_4904495_+\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|235797
NZ_CP023700.1\|WP_026084954.1\|4916123_4917380_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP023700.1\|WP_016825034.1\|4918045_4918534_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|213038
NZ_CP023700.1\|WP_016825045.1\|4899335_4900007_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP023700.1\|WP_004984593.1\|4905936_4906905_+\|NADH-quinone-oxidoreductase-subunit-H	unknown	unknown	gnl\|CDD\|376297
NZ_CP023700.1\|WP_004984589.1\|4908363_4908765_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_CP023700.1\|WP_016825036.1\|4915447_4916014_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP023700.1\|WP_004984577.1\|4917658_4917925_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|182475
NZ_CP023700.1\|WP_016825039.1\|4908761_4910756_+\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_016825037.1\|4912333_4913833_+\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	5.92024e-99
NZ_CP023700.1\|WP_004984583.1\|4914080_4914944_+\|zinc-metalloprotease-HtpX	gnl\|CDD\|235102	PRK03072, PRK03072, heat shock protein HtpX; Provisional.	0
NZ_CP023700.1\|WP_016825044.1\|4900291_4901647_-\|sensor-histidine-kinase	gnl\|CDD\|379374	pfam13796, Sensor, Putative sensor. This family is often found at the N-terminus of proteins containing pfam07730 and pfam02518. The N-termini of proteins containing these two domains often function in stimulus sensing.	5.42762e-47
NZ_CP023700.1\|WP_016825038.1\|4910762_4912337_+\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|273903	TIGR01972, NADH-quinone_oxidoreductase_subunit_M, proton-translocating NADH-quinone oxidoreductase, chain M. This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport].	3.5015e-167
NZ_CP023700.1\|WP_150474957.1\|4904491_4905940_+\|NADH-quinone-oxidoreductase-subunit-C	gnl\|CDD\|376317	pfam00329, Complex1_30kDa, Respiratory-chain NADH dehydrogenase, 30 Kd subunit.	3.49454e-44
NZ_CP023700.1\|WP_016825043.1\|4901918_4903139_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.41545e-28
NZ_CP023700.1\|WP_004984601.1\|4903401_4903809_+\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|169084	PRK07756, PRK07756, NADH-quinone oxidoreductase subunit A.	2.15705e-34
NZ_CP023700.1\|WP_026084955.1\|4897113_4899042_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NZ_CP023700.1\|WP_004984581.1\|4914940_4915336_+\|YccF-domain-containing-protein	gnl\|CDD\|236975	PRK11770, PRK11770, YccF domain-containing protein.	2.42972e-55
NZ_CP023700.1\|WP_004984592.1\|4906904_4907576_+\|NADH-quinone-oxidoreductase-subunit-I	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	5.58339e-40
NZ_CP023700.1\|WP_004984610.1\|4896071_4897121_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|237006	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed.	5.82705e-173
NZ_CP023700.1\|WP_016825042.1\|4903799_4904495_+\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|235797	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB.	6.43785e-88
NZ_CP023700.1\|WP_026084954.1\|4916123_4917380_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.04143e-53
NZ_CP023700.1\|WP_016825034.1\|4918045_4918534_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	5.72286e-85
NZ_CP023700.1\|WP_016825045.1\|4899335_4900007_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.00867e-40
NZ_CP023700.1\|WP_004984593.1\|4905936_4906905_+\|NADH-quinone-oxidoreductase-subunit-H	gnl\|CDD\|376297	pfam00146, NADHdh, NADH dehydrogenase.	1.35787e-108
NZ_CP023700.1\|WP_004984589.1\|4908363_4908765_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	5.10853e-35
NZ_CP023700.1\|WP_016825036.1\|4915447_4916014_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	5.40116e-14
NZ_CP023700.1\|WP_004984577.1\|4917658_4917925_+\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|182475	PRK10457, PRK10457, hypothetical protein; Provisional.	2.13337e-12
NZ_CP023700.1\|WP_016825039.1\|4908761_4910756_+\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	3.77484e-152

>NZ_CP023700.1|WP_004984592.1|4906904_4907576_+|NADH-quinone-oxidoreductase-subunit-I
MAPIPGSGLAKGLAVTLRTMTKKPVTDQYPDTQPALPPRTRGVIGLFEENCTVCMLCARECPDWCIYIDSHKETIPATTPGGRERSRNVLDRFAIDFSLCMYCGICIEVCPFDALFWSPEFEYAETDIRDLTHERDKLREWMWTVPAPPALDPGAEEPKELAAARKTAEKLAAAQAAEAAPPPAPPAGTESHADEQARAAESPARPAGESQQQTDRPRQEGGE
>NZ_CP023700.1|WP_004984593.1|4905936_4906905_+|NADH-quinone-oxidoreductase-subunit-H
MNDALDVALRLLVVFVVFLTFPLIVGQTEHKVMAHMQGRLGPMYAGGFHGWAQLIADGVKFAQKEDVVPAGADRRIFQLAPAVSLLPYLLVLLAIPIGPGEGAVGQVLDAGVFFVLAVMGVGVLGSLMAGWSSANKFSLLGGLRTAAQLLAYELPMLLTAASVAMAAGTVSLVGILDAFEWWWLPWQITGALVFFVAGLAELQRPPFDMPVADSEIIFGAYTEYTGLRFALFLLAEYAGIVVLCGLTTVLFLGGWHGPWGADGLGWVWTLLKTAVLAFVVIWLRVTYPRLREDQLQKLSWTLLVPLSLAQIAFTGVVKVVFL
>NZ_CP023700.1|WP_150474957.1|4904491_4905940_+|NADH-quinone-oxidoreductase-subunit-C
MTAVGWLPAGAEELFGTDATAEESYGVLTVDVPPASWISALETARDRVGCTFFDWLSAVDEPGTGFRVTAHVVALSPVRRLLLRTTVPHEAPTLPSAVDVYAGAAWHERETHEMFGIDFTGHPALEHLLLPDGFEGHPLRKDFVLAARVAKAWPGAKEPGEPAAGAEHGGPRRRQMLPPGVPDPNEWGPLKGQLPPAPTRSARGAGRAAAGAGRAAGERPAPAARAAGDRPVRRTRTAAEGSASQVAGGAAGRAAQARPGEPGTDSGASTEPTRPSEPAAPPARRARSASEGSASQRAGARGAGGPRRARSASEGSASQRAASDRAASPGGTGPADGAPAPGPAGGRPEREPSGAPRSPDAPWHHARPAFDRPEAEDGTGAGPETASEAARETAGPDVSPGTAPDTTPETAGGSEDPAREPKPASKGRGTPDRPSPDSPDSPSDGGPSDGGPSDDSPRAPGGPATPGDPDAPAPDDPSGGPR
>NZ_CP023700.1|WP_016825042.1|4903799_4904495_+|NADH-quinone-oxidoreductase-subunit-B
MDVTPSTSSNPSAPSASSAPSAAEPVLLPEPKRLGALARLAPEPMKVVLNWGRRYSLWVFNFGLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMVVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIARESLGERYGTGPGTAPGAGRPSAAALQSGLVAPPAAGEPGGGTPDTGEER
>NZ_CP023700.1|WP_004984601.1|4903401_4903809_+|NADH-quinone-oxidoreductase-subunit-A
MREPTVVETTVVAADYFQSYSVVGLLAVVGLLFVAVAFGAGRLLRPVVPTPEKLLTYECGVDPVGEGWAHTQVRYYVYAFLYVIFAVDSIFLFPWATVFAADGYGATTLVEMFIFLGFLAVGLLYAYKKGVLTWT
>NZ_CP023700.1|WP_016825043.1|4901918_4903139_-|sensor-histidine-kinase
MRMTERHPSLGTPVTAVPDTAGHGDRPPPPRFAYGAHTWKEIAHLLANLPVSLIGFVYVATALFTGVGLTVTVIGFPVLAAGLMGARLLGRMERARARKLLGVRVEEPSRLPWRGARGFWPQLWMAVKDPVGWRTVLYEFIRLPWGVLTFTVTLVGLFVLWPVLPFVVRGLADVDRMMVRGLLSPSDELERRIAELESDRGVVFDTAAADLRRIERDLHDGAQARLVNLAMGLGLAKEKLLEDPDSAAAMVEEAHGEVKLALQELRDLARGIHPAVLTDRGLDAALSSVASRCTVPVKVTVDLAERPAAAIEGIAYFTVSELLQNVSKHSGARAAAVDVWRSEDRLLIQVWDDGRGGASLDGGTGMRGLADRLGAVDGLFVVESPEGGPTTVTAELPWRDRSGVPA
>NZ_CP023700.1|WP_016825044.1|4900291_4901647_-|sensor-histidine-kinase
MATYDGQGYGLDTGPGRPGERRHRLPAALRAPVEGRTWRELGHVLLSLPISVLLFTYAVTMVSLGAGLLVTFLGVPVLAAALAGCRGFGAVERARARGLLGLEVDEPEPLRMKRQGFMAWIGAVLKSGSSWRSLLYAVLQLPWAVFSFAVVVTVWSVGWSLLTYPLWFWVFPVYTGQGGIQLYGDEQHRIYLDNPFEITVTALVGLLFTIATPWIVRALTTVDRVMVHGLLGPSRLATRVVELESDRGVVVDTAAADLRRIERDLHDGAQARLVNLAMDLGLAKEKLREDPQVAAQMVDEAHGEVKTALQELRDLARGIHPAVLTDRGLDAALSSVASRCTVPVQVEVDLAERPAPAIEGIAYFTVSELLQNISKHARATWAAVEVWRTENRLMLQVVDNGVGGADVSRGSGLAGLAERLDAVDGILVVDSPVGGPTRVTAELPWRAERTR
>NZ_CP023700.1|WP_016825045.1|4899335_4900007_-|response-regulator-transcription-factor
MEDRVRVVIAEDSVLLREGLTRLLTDRGHEVVAGVGDGDALIKTIAELDGQDLLPDVVVADVRMPPTHTDEGVRAAVRLRKDHPGIGVLVLSQYVEERYATELLAGSSRGVGYLLKDRVADVREFVDAVVRVARGGTALDPEVVAQLLGRSRKQHVLAGLTPREREVLGLMAEGRTNSAIARQLVVSDGAVEKHVSNIFLKLGLSPSDGDHRRVLAVLTYLNS
>NZ_CP023700.1|WP_026084955.1|4897113_4899042_-|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MTSQVSSPAEQADEAVVGEQRKAAGAKDVRRLDRVIIRFAGDSGDGMQLTGDRFTSETASFGNDLSTLPNFPAEIRAPAGTLPGVSSFQLHFADHDILTPGDAPNVLVAMNPAALKANIADMPRGAEIIVNTDEFTKRALQKVGYGSNPLEDGSLDGYHLHPVPLTTLTVEALKEFDLTRKEAERSKNMFALGLLSWMYHRPTEGTEKFLTSKFAKKPDIAAANIAAFRAGWNFGETTEDFAVSYEVAPAVKAFPPGTYRNISGNLALAYGLVAASRQADLPLFLGSYPITPASDILHELSRHKNFGVRTFQAEDEIAGIGAALGAAFGGSLAVTTTSGPGVALKSETIGLAVSLELPLLIVDIQRGGPSTGLPTKTEQADLLQAMYGRNGEAPVPVVAPRTPADCFDAALEAARIALAYRTPVFLLSDGYLANGSEPWRVPDLEELPDLRVRFAQGPNHTLDDGTEVFWPYKRDPRTLARPWAIPGTPGLEHRIGGIEKQDGTGNISYDPANHDFMVRTRQAKVDGIEVPDVEVDDPHGARTLVLGWGSTYGPITAAVRRLRAAGESVAQAHLRHLNPFPHNLGEVLRGYDKVVVPEMNLGQLATLIRAKYLVDATSYNQVNGMPFKAEQLATALKEAIDD
>NZ_CP023700.1|WP_004984610.1|4896071_4897121_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MTEALKLVPRAEGKQSMKDFKSDQEVRWCPGCGDYAILAAVQGFMPELGLAKENIVFVSGIGCSSRFPYYMNTYGMHSIHGRAPAIATGLAASRRDLSVWVVTGDGDALSIGGNHLIHALRRNVNLKILLFNNRIYGLTKGQYSPTSEVGKITKSTPMGSLDAPFNPVSLAIGAEASFVARTVDSDRKHLTEVLRQASAHPGTALVEIYQNCNIFNDGAFEVLKDRQQAEEAVIRLEHGEPIRFGHEQSKGVVRDRATGDLKVVAVTPENEADILVHDARSASPTTAFALSRLADPDTLHHTPIGVFRSVDRPVYDTLMGDQLDTAVEQHGKGDLAALLAGNDTWTVVG
>NZ_CP023700.1|WP_004984589.1|4908363_4908765_+|NADH-quinone-oxidoreductase-subunit-NuoK
MHLAYPAVLSALLFCTGLYGVLARRNAILVLMSVELMLNAVNLNLVAFDVWLSRAAEETLHSGQALTLFTIAIAAAEIGIGLAIVLAVYRNRGTSDIDRLRDTAEGHEPDGPDAPDHDASAPRAAAENAEATA
>NZ_CP023700.1|WP_016825039.1|4908761_4910756_+|NADH-quinone-oxidoreductase-subunit-L
MTTTTLAVLVPLLPFLGALAGLLLGRTAPGFVRPLAVLPTLASLVLAAVVAARQGGGRAVDAATELTPTGSVPIELALYIDGFAALTAVLVTVVAACVQIYSTGYLRDDPRYPSYAALVSLFTSAMLLVVYSGDLMVLLVGWEVMGICSYFLVGHYWETPQARAASLKAFLVTKLGDVPFLIGLFALATEAGSFRITRILDAVAGGGIEHPTLIALLLLAGVAGKSAQFPLHTWLPDAMAGPTPVSALIHAATMVAAGVYFVARLLPLFEASRAAMTVLAVMAAVTMAGSALAALAQDDIKRVLAYSTIGQLGYMTGALAVADRGAAVFHLLSHGAFKALLFLAAGVIIHAAGTNSLAAMSRTSHLRDRVPDAYWTMTVALLALAAIPPFSGFFSKEAVLGVAEHVVTGHTEHAPAAAGWIVLLAGLLTALLTAAYATRLWLLAFRGHGPEAPDHGRQPLAMTAVLWVLAVPSLAFGGFAFRVLPDWFDGHDLTPTLTTSVLGTGVALVGGIVTYATWRHTTAYAARTPLGAVAAHPEGGAGRVEAEAIAGHEPAYGDIAYAPDPSDPGRLLLGPLHRHAAAGFHLDAVYTALFVRPVRAGARLVRFLDREVVDTYVRGAGTLPRWLGAAVRRAQTGNLQTYVSVLLAGTVVLAVAAVLVATGA
>NZ_CP023700.1|WP_016825038.1|4910762_4912337_+|NADH-quinone-oxidoreductase-subunit-M
MIDINESVMQFLLAFLVVGPLLGAATALLPAPPGLKGKSPEQAVLRHGVTVTGAVLLAALVLVLGFDHDQPSKMQATTDISWIPALDVRIHLGTDGISLPLLVLTALLTFLSALHSYFKPPAGPSPKAFVALLLVLESGTLATFAVLDLVLFFLAFETVLIPMYFLIARWGGEGRAEAAWKFILYTLLGSVVMLLGLLLIGLGAGTFDMVALATDNGRALTTTVQVTAVLAIGLGLAVKTPMWPLHSWLPDAHTAAPTVGSVLLAGVLLKMGTYGFVRILLPAAPDGFRTFAPYLAAFAVVGIIYGSLACLALARRGAKGDLKRLIAYSSVGHMGFVLLGVATMTPTGVNGALFANIAHGLITGLLFFLVGALKDRTGSTDLDTLAQETGAALYGKAPRLGGLLAFGAVASLGLPGLAGFWGEMLALFGAFDPAEGLSRPAFLTFMAIGAFGTLLTAAYLLIVVRRVCMGAAPREAPELTDVRGHEFAAWTPLVVLTVVAGLWPRTLLGLTDPAVQQLLAGGTR
>NZ_CP023700.1|WP_016825037.1|4912333_4913833_+|NADH-quinone-oxidoreductase-subunit-N
MSSLVQSVDWLAIAPPTIAAVVGVVVLVADLFVGETRKPLLGWFSVAGLAVAALMLLPLLDADRSTFCLVGDTGVCSYTADRFTLVIQFLVLGGALLAALLSVTALKDAGKRLPEGEYWFLFLSSTAGAALLPASRDLATLVVALEVASLPAFALVGLRRGDRRSSEAALKFFLSSVTATAVSLLGISFVYAATGTLHLTRVAERIQNVDGQLHILAQTGVVLTLVGFAFKTAAVPFHFWVPDTYVGAPLPIAAYLSVIGKAVGFSGLILVTVVALPSYADVWGPALAVLAALTMTVGNVGALRQQAARAYSAVRLLAWSSVGQAGYLLVPIAAAAYTDDAEKAIGSTLAYALMYAAVNLGAFAVAALVGRTHRLNRVADYRGLYAASPLTALLLGFFLLCLAGLPPGIIGLFAKVTVFSAAVDAGLGWLAVVMAVNVVIALVYYLQWTALLFRAPEGEPVKHRLPAPLTAAIALTGVLGVVLSGAPQLVLRFTDTGLF
>NZ_CP023700.1|WP_004984583.1|4914080_4914944_+|zinc-metalloprotease-HtpX
MHRRHNGLRTAILLGGLSALIIVIGSFFGRTGLVIAVLVALGTNAYAYWNSDKLALRAMRARPVSEFEAPGLYRMVRELSNQARQPMPRLYISPTEAPNAFATGRNPRNAAVCCTEGILRLLDERELRGVIGHELSHVYNRDILISSVAGALASVIMFLVNFAWLIPIGRSDDDDGPGLLGMLMIMILGPIAASLIQLAISRSREYEADASGAQLTGDPLALASALHKLERGTKQLPLPPEPRLETASHMMIANPFRPGQGFSKMFSTHPPMAERIARLEKMAGRLP
>NZ_CP023700.1|WP_004984581.1|4914940_4915336_+|YccF-domain-containing-protein
MKTILNVIWLVLSGFWLFLGYLLAGVLLCVTIIGIPFGIAAFRIGVYALWPFGYTAVERRDAGAASFIGNVLWLILAGWWLAIGHIVTGLALCVTIIGIPLGIANFKLIPVSLLPMGREIVRTDQQFAARW
>NZ_CP023700.1|WP_016825036.1|4915447_4916014_+|SMI1/KNR4-family-protein
MTEHEQLLARVADKARTVRPWGRPSLPEPVDAAAPARAEDALGFGLPPLLAELYLRIADGGFGPEYGLLPLLDSPSSGEPAAVAQYLARRESGREDPDRPWPEGVLPISGWGCGMYACVDCHSPRATVVLFEPNPGDPALAWYVDAPSLEDWLRSWVEGTGWYEEGNEDVDLVPWTDARVRVKPSRAS
>NZ_CP023700.1|WP_026084954.1|4916123_4917380_-|amino-acid-permease
MRLVATPSGSELRRTLGVGDAVVIGLGSMVGAGVFAAPAPAAQTAGSGLLLGLAVAAVVAYCNAMSSARLAARYPASGGTYVYGRERLGEFWGYLAGWAFVVGKTASCAAMALTVGAYVWPEQAHAVAVAAVVALTAVNYGGVRKSAWLTRVIVAVVLAVLASVVVVSLASGEADPGRLGIEVPNGAGGVLQAAGLLFFAFAGYARIATLGEEVRDPARTIPRAIPLALGIALVVYAAVVVAVLSVLGAQGLGDATAPLADAVRAAGVPGLAPVVRVGAAVAALGSLLALILGVSRTTLAMARDRHLPGGLAAVHPRFQVPHRAELVVGAVVAVLAATVDVRGAIGFSSFGVLTYYAVANASAWTLRSGPAARVVPALGLAGCLVLAFSLPGLSVAMGAGVLAVGVLAYGVRRSRAGR
>NZ_CP023700.1|WP_004984577.1|4917658_4917925_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MTIISWIILGLLAGAIAKFLLPGRDPGGLIGTTLIGITGAFIGGWISARWLDHPVTKDFYDGTTWIAAIGGSLVLLIAYRLLFGHSRD
>NZ_CP023700.1|WP_016825034.1|4918045_4918534_-|YajQ-family-cyclic-di-GMP-binding-protein
MADSSFDIVSKVERQEVDNALNQAAKEISQRYDFKGVGASISWSGEKILMEANSEDRVKAVLDVFQSKLIKRGISLKALDAGEPQLSGKEYKIFASIQEGISQENAKKVAKIIRDEGPKGVKAQVQGEELRVSSKSRDDLQAVIALLKGKDFDFALQFVNYR

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Crispr_ID: NZ_CP023700_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_6

5253921-5254027

Orphan

Consensus_repeat	Method
CTGGCGCAAGAGCACCTACAGCAACGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023700_6

>merge|NZ_CP023700|6|5253921-5254027|CRISPRCasFinder
CTGGCGCAAGAGCACCTACAGCAACGGCACAGGTGGGGATTGCGTAGAAGTCGCCGAGGCCTTCCCCGGCGCTGCCCGCTGGCGCAAGAGCACCTACAGCAACGGCA

>NZ_CP023700|6|6|5253921-5254027|CRISPRCasFinder
CTGGCGCAAGAGCACCTACAGCAACGGCA	CAGGTGGGGATTGCGTAGAAGTCGCCGAGGCCTTCCCCGGCGCTGCCCG
CTGGCGCAAGAGCACCTACAGCAACGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_106431127.1\|5247145_5247934_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911
NZ_CP023700.1\|WP_039830924.1\|5255897_5257289_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224983
NZ_CP023700.1\|WP_016824838.1\|5251886_5252210_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004984039.1\|5245096_5246917_+\|phosphoenolpyruvate-carboxykinase-(GTP)	unknown	unknown	gnl\|CDD\|235256
NZ_CP023700.1\|WP_016824833.1\|5254172_5254898_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP023700.1\|WP_016824840.1\|5248581_5250912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_144055252.1\|5247990_5248485_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_026084917.1\|5251017_5251536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_026084914.1\|5261499_5262303_+\|proline-hydroxylase	unknown	unknown	gnl\|CDD\|214780
NZ_CP023700.1\|WP_004984040.1\|5244056_5244770_-\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|367292
NZ_CP023700.1\|WP_016824844.1\|5242151_5243705_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP023700.1\|WP_016824836.1\|5252661_5252871_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_106431126.1\|5258245_5261131_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|315987
NZ_CP023700.1\|WP_016824837.1\|5252200_5252662_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|340413
NZ_CP023700.1\|WP_026084913.1\|5262369_5263236_+\|PhzF-family-phenazine-biosynthesis-isomerase	unknown	unknown	gnl\|CDD\|334973
NZ_CP023700.1\|WP_026084912.1\|5263951_5265046_-\|DUF4190-domain-containing-protein	unknown	unknown	gnl\|CDD\|379388
NZ_CP023700.1\|WP_004983980.1\|5265395_5265818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_086019056.1\|5255149_5255389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016824816.1\|5263236_5263722_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100006
NZ_CP023700.1\|WP_004983991.1\|5261249_5261429_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_106431127.1\|5247145_5247934_-\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	1.28731e-23
NZ_CP023700.1\|WP_039830924.1\|5255897_5257289_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224983	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism].	8.82193e-82
NZ_CP023700.1\|WP_016824833.1\|5254172_5254898_+\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	5.44454e-07
NZ_CP023700.1\|WP_004984039.1\|5245096_5246917_+\|phosphoenolpyruvate-carboxykinase-(GTP)	gnl\|CDD\|235256	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP).	0
NZ_CP023700.1\|WP_026084914.1\|5261499_5262303_+\|proline-hydroxylase	gnl\|CDD\|214780	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues. Mammalian enzymes catalyse hydroxylation of collagen, for example. Prokaryotic enzymes might catalyse hydroxylation of antibiotic peptides. These are 2-oxoglutarate-dependent dioxygenases, requiring 2-oxoglutarate and dioxygen as cosubstrates and ferrous iron as a cofactor.	0.000258068
NZ_CP023700.1\|WP_016824816.1\|5263236_5263722_-\|RidA-family-protein	gnl\|CDD\|100006	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.3053e-58
NZ_CP023700.1\|WP_016824844.1\|5242151_5243705_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.19305e-65
NZ_CP023700.1\|WP_026084913.1\|5262369_5263236_+\|PhzF-family-phenazine-biosynthesis-isomerase	gnl\|CDD\|334973	pfam02567, PhzC-PhzF, Phenazine biosynthesis-like protein. PhzC/PhzF is involved in dimerization of two 2,3-dihydro-3-oxo-anthranilic acid molecules to create PCA by P. fluorescens. This family also contains uncharacterized Mycobacterial proteins, though there is no significant sequence similarity to pfam00303 members. This family appears to be distantly related to pfam01678, including containing a weak internal duplication. However members of this family do not contain the conserved cysteines that are hypothesized to be active site residues (Bateman A pers obs).	5.13054e-72
NZ_CP023700.1\|WP_106431126.1\|5258245_5261131_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|315987	pfam13424, TPR_12, Tetratricopeptide repeat.	1.05825e-07
NZ_CP023700.1\|WP_016824837.1\|5252200_5252662_-\|ATP-binding-protein	gnl\|CDD\|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	9.94968e-19
NZ_CP023700.1\|WP_026084912.1\|5263951_5265046_-\|DUF4190-domain-containing-protein	gnl\|CDD\|379388	pfam13828, DUF4190, Domain of unknown function (DUF4190). This integral membrane domain is functionally uncharacterized. One of the membrane helices contains two GXXG motifs that are usually associated with dimerization.	2.30083e-10
NZ_CP023700.1\|WP_004984040.1\|5244056_5244770_-\|hemolysin-III-family-protein	gnl\|CDD\|367292	pfam03006, HlyIII, Haemolysin-III related. Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.	3.61269e-51

>NZ_CP023700.1|WP_016824836.1|5252661_5252871_-|hypothetical-protein
MHDHHPAAADACVEELRAALAAHGITLPSLGLDVPTFASPYPTRPLIALVTCNLLTARALTAALRKGAA
>NZ_CP023700.1|WP_016824837.1|5252200_5252662_-|ATP-binding-protein
MCPPLTLELLAAPAAVSGVRRALRDHGADVQLCASELVTNVIRHLGEGVPVTVRVSCDGGRTRLKVTDPDPRALPVLHEAVDVDDESGRGIALLDALALRWGVEREPDRKTVWCELPDTAAVATAVGHEPPYSRSGSTSTTSPWPPPDRLPCS
>NZ_CP023700.1|WP_016824838.1|5251886_5252210_-|hypothetical-protein
MLMNALRLRRRVRRLDRPVSTVVGTGDLLLCGVLLLTATGVLFHEPTTREEESAAFGLAGQVYGYWLVGGLALFSVLGMPRTLLAHLAVMLLSPVVLFLLLVSPSLL
>NZ_CP023700.1|WP_026084917.1|5251017_5251536_-|hypothetical-protein
MAWDEWEQLKADALQRQQNSTRMQVNQADGGGGFGGPGRPGSYGDLKVSNGGLTKIGKAAFELYNQLWDKARVSVPSSDSAAADLSKQGFALGAGLKHVSNRWEEQLASLMDACAHISNHMRVTKKLHGDDEDYIQRQMSSIAVLDAGFDERVGAPGRKNSIYGEPSKKKEE
>NZ_CP023700.1|WP_016824840.1|5248581_5250912_-|hypothetical-protein
MELDTLRDADFSLLDEAVTDWSTLVKSLEELKKDAEDNLHKGANKADWAGVNAKVSKEFIGKTAGEFADAHTQAKSTYQILSDTVGELKRYRRQLVDAIEVGRKKNLTVIGHEGGFTVTTNAPPEARGTMDQDNEGDITALRDEIQGILDKATESDNSARTVLQALADQSELGFSDASYADRDSAAEALRRADQLAALAKKDPDDLTVKDFDRINAGLKKYAGDELFAERFATTLGPKKTLEFWAGISDPNRGNWELGRDRLDQFDDLQRSLGLTLANATQSDSAAMADWKRTMIDIGDKPVYGNQGGPMGFQVMSNLMRTGDYDDRFLKDYGTKLMATERKLTGNGEHPNFAWRQGPATPWLNRIGEDSGTDPLTGYLKGLSNSPDAATDFFNQRFISKDDPDNPFERDTDGNGRKGKVSLSNFQYLFEERDWPQESDSKGEDLHTGQNNLALALEAATTGHPAGELPTPDTPAHNAGQTKLFESIVASISEDPERLTKSSYMSDSIGQIASEYLPDINRAATGVDPHPDEGNLDAQRAWEQTKNLYPIAGSAAEMNHRDASRFLFAVAQNPEGYAAVEVGQKNYMTNLMDYHLNPGLPERQHPHHDKELTVRSIAWNSGEVSGTLAMGRNEAVAARGVELDEQYGHSMTQWKNTVSGTIGLGVGIGTSFIASPVAGAVVGGTTGTVTSVVMEQFFKDLEGDAQGNAGPTMGENWENGQENNMKYTRQAASEAARAHNHANPDDVASWAQEESRKGFLSAGDYMERVAPELVTDI
>NZ_CP023700.1|WP_144055252.1|5247990_5248485_-|hypothetical-protein
MLALAAVGALTGCSGSDKEKKYDVPESLCGTPLDPSIIAELLPSGKSINVQEKNPVPGLKRCQVNIDKKLAFRVSQEWWEEGDTVVDVAKGVPQVKSAELTDDSDSLLTGTGGVQRAHCADSERPGHILFTTAQVYADGVDDSAAMRELITEYTRAVEESAVCR
>NZ_CP023700.1|WP_106431127.1|5247145_5247934_-|VOC-family-protein
MKSACAVFRAPGVRHPDGDDKEHRMSAPPGGVGEFCWMDVKTRDLPGTAAFFSKALGWRFAVDEEDWRRATKISAGGHRVGGVSDLAHPVYPPGTPAHIAYYLAVDDVDRRVEAATADGARLVVAPFDAGDQGRTATLVDPVGAAFSLWQPRRFTGWGFPPRSAGVPQRMVLACDRPERARDFYRKALDVRPARADFVTAPGPAASAPRWELAVGVDDPDGVVARAGGLGPGAVLRSEEGGRPVVRLSSPEGLTVHVRGLEP
>NZ_CP023700.1|WP_004984039.1|5245096_5246917_+|phosphoenolpyruvate-carboxykinase-(GTP)
MARDIAAPSVPTTHQGLISWVNEIADLTQPDNVVWCDGSEAEYERLCEELVAKGTFRKLDPVKRPHSYYAASDPTDVARVEDRTFICSEKEEDAGPTNHWKAPAEMREIFTGDKGLFRGSMRGRTMYVVPFCMGPLGSPLSALGVEITDSAYVAVSMRTMTRMGQPVLDELGSDGFFVKAVHSLGAPLEPGQEDVPWPCNSTKYISHFPEDREIWSYGSGYGGNALLGKKCYALRIASVMARDEGWLAEHMLILKLTPPRGESKYVAAAFPSACGKTNLAMLEPTIPGWTVETIGDDIAWMRFGEDGRLYAINPEAGFFGVAPGTGEHTNANAMKTLWGNSVFTNVALTDDGDVWWEGMTEEPPAHLTDWKGNDWTPASETPAAHPNARFTVPASQCPIIAPEWEDPKGVPISAILFGGRRASAVPLVTESFDWNHGVFLGANVASEKTAAAEGKVGELRRDPFAMLPFCGYNMGDYMAHWVDVAKDKDQSKLPKIYYVNWFRKNDDGKFVWPGFGENSRVLKWIVERLEGEAEGVETPIGVLPTKEALDTEGLDLSDADLDFLLTVDKDVWREEAALVPDHLNTFGDHTPKELWDQYHALVKRLG
>NZ_CP023700.1|WP_004984040.1|5244056_5244770_-|hemolysin-III-family-protein
MTAFTPDAPTDPPAEGRGPVVTALPHPVKPKLRGWLHLGMFPAALVAGLVLTAFADSPRGRLACAVYALTACLLFGVSALYHRGDWSPRMDGVLRRLDHANIFLIIAGTYTPLTILLLPDSKGRWLLWGIWAAAAAGIVFRVFWVGAPRWLYTPCYIAMGWAAVFFLPDFLRTGGIAVLVLVVVGGVLYSAGGVVYGIKKPNPSPRWFGFHEVFHSFTLAAFIAHYVGISLVAYQHP
>NZ_CP023700.1|WP_016824844.1|5242151_5243705_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MLTLGFDLTILNVALPTMAAQLGASTGELQWIVDSYIVVFAALMLPAGLLGDRFGRRRMLVVGLCVFLAGSLAGALTDAPGLVVAARSAMGLGAALVIPLGLSVLPSMFGEEERGKAVAAVTASMAAGMPLGPLVGGLLLDHYWWGSIFLINLPMAAAGIAACLFLLPESRDPSSPRVDALSTALSALGLGALVFGIIEGPTRGWTGPWVLGSFALSALLLTGLVARERRAARPMLDLALLGRRVFLFNVLAAALGTFVLAGLLFVLPTYLQEIGGSDAFGTGLRLLPLMGGLLVSARVSTPLVRRLGPRPVVGAGLVVLCFAALLGARTDPGSGYGFTAVWLTVAGLGFGLAMVPAMDAALGGIPADAAGSGSALLMTLRQVGGAVGIALLGSLVADTYAARLDTTGLPAPAAEAARESLSGAHAVAERLGLPALARSADAAYLDGMALVLVVCGIAALVTAALVALFLPNPRPAAPPAGRTADVPDTTAPDRPGPEAESSPAMARAKGDGGQLTA
>NZ_CP023700.1|WP_016824833.1|5254172_5254898_+|NUDIX-hydrolase
MTQPSGVDLFDADRLRLVEAPLPLLSPEERRVLDDAWDAAARANPALFDGPVAGCTGLEQEGPGRLVLTWVRATYRFYVLRRVPGATVRLPSLFAAVAQPADDGRLLVGRMALWTTAPGRWQFPGGSVEPPPDGEPLDLAALRRHAARELAEETGIDTPADDLALRQVVRGANGSVGVLFRAPPRPVSWLHERFAALTSSEHALGRVPELDRIALVRSPADLVGLAGPKVSYLEPVLRLAR
>NZ_CP023700.1|WP_086019056.1|5255149_5255389_+|hypothetical-protein
MEIAARGHADTIAARGVVHRLAGRLPHRLHSTPLRPRLHDHFVIVHRRHTTLSRATRTLVDLATTRLRQAAARGRQADP
>NZ_CP023700.1|WP_039830924.1|5255897_5257289_+|NAD(P)/FAD-dependent-oxidoreductase
MTNRKRVAIVGAGPSGMAQLRAFETAARAGVDIPEIVCFEKQADWGGQWNFTWRTGLDEYGEPVHSSMYRNLWSNGPKEALEFADYTFDEHFGRAVSSYPPRSVLWDYIAARLKKTNVRDFIRFRTVVRWTEYDAEREVFTLTVENLPTGETTTEEFDHVVVASGHFAFPNVPHFPGIETFPGYVAHAHDFRGAEAFKGQDVLVVGSSYSAEDIGSQAFKMGARSVTASYRSAPMGYDWPEGFEERPAIKRIEGNTVHFVDGTSKHIDAVILCTGYLHKYPFLPDELALASPNNVYPDGLYRGVVWQDNPRLAYLGAQDQWFTFNMFDAQAWYVRDLILGRAELPSKTERSASIAEWRERFEKLSSDAEEVRFQADYVRDLLRQTDYPEFDLDRVVEIFLAWKRDKKADIMGYRDRVYRSVMTGTLAAEHHTPWLEELDDSIERYLAEDPAKTPQKAELRAAA
>NZ_CP023700.1|WP_106431126.1|5258245_5261131_+|tetratricopeptide-repeat-protein
MAHCFPYSSKKARIRPDRALAEYDDIADSLATFLRVQIPRTGRVVLVTHSQGGLIVQRYLVRTLHEDRGHTLARIADIIMFGCPNNGSDFLLPLRRLLFFLRNPQERQLRPYQREVLETQRAVLRSVVQAERDDRSQWRIPIQAYGGTDDNVVPAREARGVFPDGATVPGDHFQIIQPEHRDEAPYRVVADVLSRLLADGESTSGGEGPSGGAGDTATSAGRPAPSAPPEPPGRPKGEASRPRVPKQQGGVSVSLPYGRRKARLHGREPRSIVARILDPPAPGDPRIHVLTGLGGSGKSRIALEAAYQAERGRRVWWVTVPRINACMREVANRLGTPSGEVEQAFRGDGSPMDLVWRYLEASPDPWLLVIDNADTPHRLAPEADQVADGTGWVRQPMQADGIVVVTTRDRAAASWLPPCRVHSVPLLGEDDGADLLLESVPDGGTREEARRLSAALGGLPLALHGAASYLSSVHDAALSLDDPVIHDFAGYRAEFEARSASPPGTTASGLDEMLGLSTMAEVCGIALDLLSSQGLVQAGPLLRMFACLGIAPIPYRSLLDSSAITESPLLPGFTRAQRNAVLKGLDDLGLVERISRPEAEGGQPAHSLTLHPVVHALLRGDAEVQERRAEYYGLIVDLLLEATRTSPPDDPVSWGIWTAIAPHMMEVVRACLAGDSHVDSNPVLRGALELARLTIRYLISVGLLRPAQELATTVLDNCEAIGFQRDSREILGVRHEQGRIALESGDHERAETELREVAAVRERLLGAKDPYTLASRHKLARSIIEQGRFGEAEPLLRSIVQAELVVHGPDHSDTVTVRHSLARAMFALGQTVEAEKELRDILQISLGKWSPSTMETLHIRQTLARCLMVTKRSDEAGELIRQALSDTTHEPDSALAMTLRFTQCQVLIDQGRFLAAHTQIAQLLADRKRVLGKGHPETLRTQRLLDAVEDLRNSSPEKSDD
>NZ_CP023700.1|WP_004983991.1|5261249_5261429_+|hypothetical-protein
MNSFHSDHQDRDLIPRDAERESDPEQMEAARRIVLESIEEDHRALERDAKLTFSPAALM
>NZ_CP023700.1|WP_026084914.1|5261499_5262303_+|proline-hydroxylase
MSSAHLHDPFFRTVTAAEFSREHIAGLAAGRWTAVRVPGLRSEADCGRVVEALQSATFESYGRQRVQPTVLRFGVGVSDHRSGGRVADSYWPALDAAREAWRDLRLPFDPLAEARQAIGADWPGAVGVGRHKGREMGAGVVREAPQGFLVHYDDAEREFTEDLLGAPLVAQLAFNLYLSVPETGGETVVWRRRWHPRDESFRPPGSYGYTDGVVQDAECIELKPTVGEGLLFDSRNYHAVRPSVGDRRIALGFSIGLTADGNLLAWG
>NZ_CP023700.1|WP_026084913.1|5262369_5263236_+|PhzF-family-phenazine-biosynthesis-isomerase
MKVLRYAAFTTDSLGGNPAGVVLDATGMNDADMASTAKDVGYSETAFVVPGDDGRMTVRYFSPAVEVPFCGHATIATAVAHAHLHGVGELTLHTRAGVIPVHTGRDDAGRVTATLTSVPPRTEPLPDDQVAALLRVLGWKAEELDRTMPPRVAYAGAWHPVLAAADRARLAALDYDMRELAALMDRHGWVTVNLVWRESPVVFHSRNPFPTGGVFEDPATGAAAAAFGGYLRAENLVPLPARITIRQGEDMGRPSTITATVPKDPGAGIAITGTAVEIEHPVAPAPTR
>NZ_CP023700.1|WP_016824816.1|5263236_5263722_-|RidA-family-protein
MPHSDSEETPSPTARLASLGLVLPAVSPPKGEYVPAVLSGHLVFVAGQVPMTGGELTTTGRLGDEVSIERGRELSRQCALAALAAVDSVAGLDRVTRVLKMTGYVSSAPGFLDQEKVVEGAGELFAEVFGAAGRPVRSVVGVADLPLGSPVEIETLFEIGR
>NZ_CP023700.1|WP_026084912.1|5263951_5265046_-|DUF4190-domain-containing-protein
MSVPPPPHPHGPAAPGAGPGSPWYPVPAPVPPPLNGLAVASLVTSLLCLAPLGLVFGCVALGQTAGGRQRGRGLAIAGVSVSGAVLLLAAAVVAFADIRVWTLPAPGDDGGATRPGRTTIASIGTGDCFDPQARPSVGDPSSLGDGRVELVPCTTPHHGEVYGSFPLTEQGDFPGRDRITAIARPRCGELFMDYALDPMAFGRLQTYYFHPDERGWESGNRTVVCWVARPGDAELDVSVRGNAADLDPAQREFLSALKPLYTAAALRPVEDQQNLTTATAWAHRMAQAQAETVRLLKDADLPGAEVPTGRLVAELEAGLPFWQQAAEAPDADVFLSRLRSVDEHNGEQHIRRIRDLLGLPLPAS
>NZ_CP023700.1|WP_004983980.1|5265395_5265818_-|hypothetical-protein
MYEPIRNKSVHRTMAGTPHDFPHRSREEELDIQLAGHLATLLAVTDELRVVAPSADLDAAAERLAEQVTRLRGGRVPARASATTASREPDATALHRRAHALAGRVLVVAASRADTAVAILAAERMDAHAAALQPRELASR

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Crispr_ID: NZ_CP023700_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_7

5324142-5324380

Orphan

Consensus_repeat	Method
CGGTCTTCGGCAACGTCGAGATC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP023700_7

>merge|NZ_CP023700|7|5324142-5324380|CRISPRCasFinder
CGGTCTTCGGCAACGTCGAGATCGACCTCAGCGAGGCGCTCTTCGACCACCAGCAGGTGGTGATCAAGGCGTTCTCGGTCTTCGGCAACGTCGAGGTCCGCGTCCCGGAGAACGTGTCGCTGCGCGGCATGGGCGGCGGCGTCCTCGGCAACTTCGAGGTGCACACGCTGGACGCGGCCGACCCCGAGGCCCCCGTGGTCTACGTGGACGGCTGGGCGGTGCTGGGCAACGTCGAGGCG

>NZ_CP023700|7|7|5324142-5324380|CRISPRCasFinder
CGGTCTTCGGCAACGTCGAGATC	GACCTCAGCGAGGCGCTCTTCGACCACCAGCAGGTGGTGATCAAGGCGTTCT
CGGTCTTCGGCAACGTCGAGGTC	CGCGTCCCGGAGAACGTGTCGCTGCGCGGCATGGGCGGCG
GCGTCCTCGGCAACTTCGAGGTG	CACACGCTGGACGCGGCCGACCCCGAGGCCCCCGTGGTCTACGTGGACGGCTGGG
CGGTGCTGGGCAACGTCGAGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_004983841.1\|5328064_5329273_-\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|272979
NZ_CP023700.1\|WP_004983839.1\|5330496_5331243_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP023700.1\|WP_004983846.1\|5326966_5327557_-\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP023700.1\|WP_004983862.1\|5318850_5320254_-\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP023700.1\|WP_026084906.1\|5326363_5326888_+\|DUF4245-domain-containing-protein	unknown	unknown	gnl\|CDD\|379430
NZ_CP023700.1\|WP_016824774.1\|5331282_5331825_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016824784.1\|5311758_5312052_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227214
NZ_CP023700.1\|WP_004983875.1\|5311128_5311653_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP023700.1\|WP_026084905.1\|5329337_5330366_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP023700.1\|WP_004983877.1\|5310439_5311132_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP023700.1\|WP_004983834.1\|5332174_5333263_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP023700.1\|WP_004983858.1\|5321952_5323629_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|237955
NZ_CP023700.1\|WP_016824776.1\|5327800_5328055_-\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|179195
NZ_CP023700.1\|WP_150474962.1\|5315653_5317786_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|369272
NZ_CP023700.1\|WP_039830916.1\|5318077_5318779_-\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|377233
NZ_CP023700.1\|WP_016824782.1\|5313256_5315560_+\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_CP023700.1\|WP_016824779.1\|5320404_5321403_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349873
NZ_CP023700.1\|WP_004983853.1\|5324643_5325021_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_CP023700.1\|WP_004983849.1\|5325203_5326238_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_CP023700.1\|WP_016824783.1\|5312048_5312984_-\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|259800

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_004983841.1\|5328064_5329273_-\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|272979	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits. [DNA metabolism, Degradation of DNA].	2.37941e-159
NZ_CP023700.1\|WP_004983839.1\|5330496_5331243_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	8.16133e-35
NZ_CP023700.1\|WP_004983846.1\|5326966_5327557_-\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	3.18673e-106
NZ_CP023700.1\|WP_004983862.1\|5318850_5320254_-\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP023700.1\|WP_026084906.1\|5326363_5326888_+\|DUF4245-domain-containing-protein	gnl\|CDD\|379430	pfam14030, DUF4245, Protein of unknown function (DUF4245). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 188 and 235 amino acids in length.	4.75619e-54
NZ_CP023700.1\|WP_016824784.1\|5311758_5312052_-\|hypothetical-protein	gnl\|CDD\|227214	COG4877, COG4877, Uncharacterized protein conserved in bacteria [Function unknown].	1.92166e-14
NZ_CP023700.1\|WP_004983875.1\|5311128_5311653_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.33296e-16
NZ_CP023700.1\|WP_026084905.1\|5329337_5330366_+\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP023700.1\|WP_004983877.1\|5310439_5311132_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.80215e-98
NZ_CP023700.1\|WP_004983834.1\|5332174_5333263_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP023700.1\|WP_004983858.1\|5321952_5323629_-\|fumarate-hydratase	gnl\|CDD\|237955	PRK15389, PRK15389, fumarate hydratase; Provisional.	0
NZ_CP023700.1\|WP_016824776.1\|5327800_5328055_-\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|179195	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional.	9.11861e-18
NZ_CP023700.1\|WP_150474962.1\|5315653_5317786_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.34502e-54
NZ_CP023700.1\|WP_039830916.1\|5318077_5318779_-\|DUF402-domain-containing-protein	gnl\|CDD\|377233	pfam04167, DUF402, Protein of unknown function (DUF402). Family member FomD is a predicted protein from a fosfomycin biosynthesis gene cluster in Streptomyces wedmorensis. Its function is unknown.	1.6607e-19
NZ_CP023700.1\|WP_016824782.1\|5313256_5315560_+\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	6.13602e-137
NZ_CP023700.1\|WP_016824779.1\|5320404_5321403_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349873	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins. Peptidase family M28; Streptomyces griseus Aminopeptidase (SGAP, Leucine aminopeptidase (LAP), aminopeptidase S, Mername-AA022 peptidase) subfamily. SGAP is a di-zinc exopeptidase with high preference towards large hydrophobic amino-terminal residues, with Leu being the most efficiently cleaved. It can accommodate all except Pro and Glu residues in the P1' position. It is a monomeric (30 kDa), calcium-activated and calcium-stabilized enzyme; its activation by calcium correlates with substrate specificity and it has thermal stability only in the presence of calcium. Although SGAP contains a calcium binding site, it is not conserved in many members of this subfamily. SGAP is present in the extracellular fluid of S. griseus cultures.	2.47456e-138
NZ_CP023700.1\|WP_004983853.1\|5324643_5325021_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	2.03132e-20
NZ_CP023700.1\|WP_004983849.1\|5325203_5326238_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_CP023700.1\|WP_016824783.1\|5312048_5312984_-\|SPFH-domain-containing-protein	gnl\|CDD\|259800	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	1.56254e-131

>NZ_CP023700.1|WP_004983858.1|5321952_5323629_-|fumarate-hydratase
MGEMPEFEYADLLPTGEDTTPYRLVTSEGVSTFEADGRTFLKVEPEALRKLAEEAIKDIQHYLRPAHLAQLRRIIDDPEASANDKFVALDLLKNANIAAAGVLPMCQDTGTAIVMGKRGQNVLTGGRDEEALSRGIYDAYRNLNLRYSQMAPLTMWEEKNTGSNLPAQIELYATDGDAYKFLFMAKGGGSANKSFLYQETKAVLNETSMMKFLEEKIRSLGTAACPPYHLAIVVGGTSAEYALKTAKYASAHYLDDMPTEGSPLGHGFRDKELEEKVFELTQRIGIGAQFGGKYFCHDVRVIRLPRHGASCPVALAVSCSADRQAVAKITAEGVFLEQLEKDPARFLPETTDEQLADEGEVVRIDLNQPMDDILAELTKYPVKTRLSLTGPLVVARDIAHAKIKERLDAGEEMPQYLKDHPVYYAGPAKTPEGYASGSFGPTTAGRMDSYVEQFQAAGGSKVMLAKGNRSKQVTDACKAHGGFYLGSIGGPAARLAQDCIKKVEVLEYEELGMEAVWKIEVEDFPAFVVVDDKGNDFFQDPAPQPTFTSIPVRGPGLG
>NZ_CP023700.1|WP_016824779.1|5320404_5321403_-|M20/M25/M40-family-metallo-hydrolase
MIRRLAGASLSLAVVLGAAALPAAAGPATASTTTANVSAAPDVDVAKVRAHLSELSAIAGRNGGNRRSTTQGYRDSVAYVKGKLQAAGYTVTEQPCTSGCTSGAGPNLIAEWPRGDANNVYMFGAHLDGVAAGPGMNDNGSGSAALLENALALAQQNPTMRNRVRFAWWTDEEQGLNGSAFYVRSLSSAERARIRAYYNFDMVASTNGGYFINHITSSAAAPMKAYWDSLGLRPEENTEGAGRSDDYSFQRYGIPTSGYAMGAGARKTSAQAAKWGGTAGASYDPCYHRACDTLSNINTTGLDRAADGIAHTLWQQAVQTGLLADDASPRGT
>NZ_CP023700.1|WP_004983862.1|5318850_5320254_-|class-II-fumarate-hydratase
MTTTDDARNHRIEHDSMGEVKVPADAKWRAQTQRAVENFPISGQRLERAHIEALARIKGAAAKVNARLGVLDQDVAEAIQEAAAEVAEGRWDEHFPVDVFQTGSGTSSNMNTNEVLATLAGERLGRDVHPNDHVNASQSSNDVFPSSIHIAATAAVTRDLVPALEHLAASLERKAEEFADVVKSGRTHLMDATPVTLGQEFGGYAAQVRYGVERLNASLPRLAELPLGGTAVGTGINTPPGFSAAVIEEVARATGLPLTEARDHFEAQGARDGIVETSGQLRTIAVGLTKITNDLRWMASGPRTGLAEISLPDLQPGSSIMPGKVNPVVPEAVLMVCAQVVGNDATVATAGASGNFELNVMLPVIARNVLESIRLLANASRLLADRTVDGIVAHRDRAREYAESSPSVVTPLNRYIGYEEAAKVAKKALAERKTIRQVVLESGYVERGDLTVEQLDEALDVLRMTRP
>NZ_CP023700.1|WP_039830916.1|5318077_5318779_-|DUF402-domain-containing-protein
MTEGGTVRGAGHGEAGGAAGFWAPGAQILWRYRENGGAHFHIARPVTVVRDDPELLAVWMAPGTECVKPVLADGTPVHREPLATRYTKPRTVQRDRWFGTGVLKLARPGEPWSVWLFWDPGWQFKNWYVNLEEPLARWAGGVDSEDHFLDISVHPDRSWHWRDEDEFAQAQHDGLVDEELAGRIREAGRAAVAAIEAWAPPFSEGWQNWRPDPSWAVPSLPQDWDRTSVHVSP
>NZ_CP023700.1|WP_150474962.1|5315653_5317786_-|SpoIIE-family-protein-phosphatase
MTEQPTSFDRPQPGADPGDPRGALVHAQEPARAPGTGAALAAQARSGGESAASQAASPAPSGAAPETAAPGGSGQDTVTGPASEHSQPGAEHGAGPDAHRPRPTSEGIPVQPAAGQEGRPVQGPDGRERRTGQVTPPGRPTPMRRDGDRLRFVGAATRRIARGIDLDEIVMGLCRATVPTFSDAILVYLREPLPVGDERPTGPLVLRLRRSDRIPADRDTEGGFAPIAPPEPNELDSVGEELCTVRPGSALAEVLRGVRPVFTDAPAARAALPELLGEQGATAVPDGQRAILAPLRGRRRVIGAALFLRRPERIPFEADDLLVAAQLATHSALGIDKAVLYGREAYIADELQRTMLPEHLPRCTGVRLASRYLPAAETARVGGDWYDAIPLPGSRVALVVGDVMGHSMTSAAIMGQLRTTAQTLAGLDLPPQEVLHHLDEQAQRLGVDRMATCLYAVYDPVSHRITIANAGHPPPVLLHLGGRAEVLRVPAGAPIGVGGVDFEAVELEAPAGATLLLYTDGLVESRLRDVWTGIEQLREKLAATAQLTGPDHPPPLEALCDEVLDMLGPGDRDDDIALLAARFDGIAPSDVAYWFLEPEDAAPGRARRLARRALSRWGLEELTDSVELLVSEVVTNAVRYATRPVTLRLLRTDVLRCEVGDDVPQLPRLRQARATDEGGRGLYLVNRLARRWGATRLSTGKVVWFELNHG
>NZ_CP023700.1|WP_016824782.1|5313256_5315560_+|penicillin-binding-protein
MGRAEERRARQRGGRRAAPGGRRSSQEGGRGGIRRLFTWKKIVGTFFSLCLLGMGAFIVLYMMIDIPEGNADATRQSNVYKYSDGSIMARTGEVNREVVDLAQIPRPVQRAFVAAENKTFYSDAGVDLKGTARGLLNTVSGKGAQGGSTITQQYVKNYYLTQEQTVSRKLKELVISLKLDREKSKDYILAGYINTSYYGRGAHGVQAAAQAYYRVDAEDLTVEQGAYLAALLQAPSQYDWAVASETGKKLVKNRWNYVLDNMVEEGWLERSERSGMEFPVPKEPKGDPGMAGQTGYLVNEANNALKKQLVADGSAEDAKQADALVDAGGWTITLNIDKKKQAALEKAVKDQLTGKLDPKEREVDADVQAGAVSVDPKTGAVVAMYGGVDYLKHYFNNATRDDYQPASTFKPVILAAAVEEGAETQDGRPITAGTVYDGTSERPVVDGGRKVGFAPENEDDGNYGDITVQTAMNKSVNSVFAQMGVDVGMERVMETAGKLGMDVEGLPAVPAQTLGSMGASPLEMAGVYATLDNHGRKTTPAIVKSAEHRSRTVTLPDAVGEQAISREAADTVTSVLTGVVDDGTARRAVRDNPLRDGQQVAGKTGTSDNNKSAWFVGFTPDLVTAVGLFGEDDEPPHKQVEMYGAGGEPRVNGGGFPAQIWAAYTFGVTEGTSTFDLETKQGAAVEPSSEPSVSQTPTEEPSTEESATEEPSQSPTTEAPSQSPTTQAPTQSPTTQTPTQSPTTQPPTAGDPEEPGDPGQERQGLGE
>NZ_CP023700.1|WP_016824783.1|5312048_5312984_-|SPFH-domain-containing-protein
MSTHDAPVTADVPEMPAPRVREFAAHSIGGGLALLLGLVGLLVGAGLIVSATAVAATGAKAALIIGGILVALAASLAMSGLNMVAPGEARVVQLFGRYRGTIRQDGLRWVNPFTSRTKISTRVRNHETAVLKVNDAYGNPIELAAVVVWRVEDTAQATFEVDDYVEFVSTQTEAAVRHIAIEYPYDAHDEDGLSLRGNAEEITEKLAVELHARVEAAGVQIIESRFTHLAYAPEIASAMLQRQQAGAVVAARQKIVEGAVGMVESALARIAEQDIVELDPERKAAMVSNLMVVLCGDRSAQPVLNTGTLYQ
>NZ_CP023700.1|WP_016824784.1|5311758_5312052_-|hypothetical-protein
MTGPSDPTEGAAPRRRPQQRKQVLLRLDPLVYEALARWAGDELRSANAQIEFLLRRALAEAGRLPGGAGPLPRRGRPPAPPSGGAPRGPSGDSSGPR
>NZ_CP023700.1|WP_004983875.1|5311128_5311653_-|PadR-family-transcriptional-regulator
MSIGHTLLGLLESGPRHGYDLKRAFDEKFGHDRPLHYGQVYSTMSRLLKNGLVEVDGIESGGGPERKRYAITEAGVTDVERWLATPEKPEPYLQSTLYTKVVLALLTSRDAADILDTQRSEHLRSMRILTDRKRKGDLADQLICDHALFHLEADLRWLELTAARLDRLREAVTR
>NZ_CP023700.1|WP_004983877.1|5310439_5311132_-|ABC-transporter-ATP-binding-protein
MTSAPAGTLLAAQDLRKAYGPTTALDGAAFSIHPGEVVAVMGPSGSGKSTLLHCLAGIVMPDSGSILYNGRELTAMNDAGRSALRRSEFGFVFQFGQLVPELTCVENVALPLRLNGAPRKEAERAALTWLERLEVDDVRRKRPGEVSGGQGQRVAVARALVTNPRVVFADEPTGALDSFNGERVMELLTEAARSTHAAVVLVTHEARVAAYSDREIVVRDGKSRDMERAV
>NZ_CP023700.1|WP_004983853.1|5324643_5325021_+|WhiB-family-transcriptional-regulator
MLQPPHSSLQVAAVPAQRGTPRDRDQEAPWHTEAVCRRDEAGLFFAPSKEPTAARLSREEAAKRVCARCPVMVECREHALLQPEPYGVWGGLTAAERRVVLARRRRREMELKKTARTTGRIAAAG
>NZ_CP023700.1|WP_004983849.1|5325203_5326238_-|class-II-fructose-bisphosphatase
MTEHHHLPSELDVPSEAPDRNLALELVRVTEAAAMAAGRWVGRGDKNGADGAAVRAMRTLVSTVSMNGVVVIGEGEKDEAPMLFNGERVGDGTGPECDIAVDPIDGTTLTAKGMSNAIAVLAAAERGSMFDPSAVFYMDKLVTGPEAADFVDINAPVNVNIRRVAKAKRVTPEDVTVVILDRPRHEGIIKEIRETGARIKLITDGDVAGSILALREGTGIDLLLGVGGTPEGIISACAVKCLGGTIQGKLWPKDDEERQRAVDAGHDLDRVLTTDDLVSGENVFFVATGITDGELLRGVRYRSETATTDSIVMRSKSGTVRRIDSEHRLSKLRAYSAIDFDRAK
>NZ_CP023700.1|WP_026084906.1|5326363_5326888_+|DUF4245-domain-containing-protein
MAGKSSMQKTARDMILSLGLIGLVAGFVWLFIPHDDSAPDLQRVDYRVDLLTARRAASYPVAAPEGLSEAWKPTSVRFRKDEGDAWHLGYQTPDGQYVAVEQSTQKRSLFIEDATQGAERTEVTQQIDGRAWTRYEGGRYDALVHEGADGSTTVVAGTASFGQLTKMAAALRAE
>NZ_CP023700.1|WP_004983846.1|5326966_5327557_-|malonic-semialdehyde-reductase
MSLVLDPAAQDLLFREARTANTFTDEPVTDEQVRAIYDLVKYGPTSMNQSPLRVTLVRSPEARERLVAHMAEGNQAKTAAAPLVAILSADNEFHEELPQLFPHFPQAKDLFFAERPVREGSAALNAALQAAYFIIGVRAAGLAAGPMTGLDFEGLRKEFLDDDHTPLMVVNIGRPGPDAWFPRGPRLDYEQVVTTV
>NZ_CP023700.1|WP_016824776.1|5327800_5328055_-|exodeoxyribonuclease-VII-small-subunit
MTGKTDKTEQAAAEVLGYEQARDELIEVVRRLEAGGTTLEESLALWERGEELARVCRRWLDGARARLDAALAEEAGAEGAEGAG
>NZ_CP023700.1|WP_004983841.1|5328064_5329273_-|exodeoxyribonuclease-VII-large-subunit
MAVNTSAEAPLPVGEVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVGVTCYRQVFDAVADVVSEGARVVVHCKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKKSLAREGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGVHAVPQVVQAVKELDALDDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVVSAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEHERVRMLRDRARRCVRALVDREERGLAQALARPSLQDPHRMVDARAEEVTALLERGRRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGQAVRAPGEVEAGEALRARVSEGEFTVRVDA
>NZ_CP023700.1|WP_026084905.1|5329337_5330366_+|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MGRMTASPGRRVLLAAPRGYCAGVDRAVIAVEKALEQYGAPVYVRHEIVHNKYVVQTLEKKGAVFVERTEEVPPGNIVMFSAHGVAPVVHEEAARGRLATIDATCPLVTKVHKEAVRFAQEDYDILLIGHEGHEEVIGTSGEAPDHIQLVDGPEDVAKVEVRDPSKVVWLSQTTLSVDETMETVDALKEKFPQLMSPPSDDICYATQNRQLAVKQMGAEADLVIVVGSRNSSNSKRLVEVAKLAGARAAYLVDFADEIDETWLEGVTTIGVTSGASVPEVLVEQVLEWLARRGFEDVEIVKAAEESITFSLPKELRRDLREEAAALVAERGGAGASGADSGK
>NZ_CP023700.1|WP_004983839.1|5330496_5331243_+|ROK-family-protein
MEIFGVDIGGSGIKGAPVDLEEGDLAQERCKVLTPHPATPDAVADGVKEVVDHFGWTGPVGVTFPGVVTDGTTIRTAANVDKSWIDTDARVLLGDRLGGLPVTVVNDADAAGVAEMHFGAGRHRRGTVILLTFGTGIGSALFVDGVLVPNTELGHLELHGHEAEKRASSKAKEDHGLSWDEWAHRVQKYLAHVEMLFSPELFIIGGGVSRKSHKFLPRIEGIKAEIVPAQLQNNAGIVGAAMRAATGA
>NZ_CP023700.1|WP_016824774.1|5331282_5331825_-|hypothetical-protein
MSGSRLPPQAGRAAGGGVARPARPDRPARVPQRRPVPVRRPAPAPAARRLPNPRLTGLGGGLFCGLVMLVLGLLVAAVFGASQTVYGVLFLPVCVLTAVWVREGDLLTAPVIVPIAFAVGLVPVAGEGGDGVGDRLMGLVTGLATQVGWLYGGTLVAGLIVLGRRIRGVNRRAAKGRPQG
>NZ_CP023700.1|WP_004983834.1|5332174_5333263_+|redox-regulated-ATPase-YchF
MSLTIGIVGLPNVGKSTLFNALTKNDVLAANYPFATIEPNVGVVGVPDARLAKLAEIFGSQRILPATVDFVDIAGIVRGASEGEGLGNKFLANIRESDAICQVIRAFKDENVVHVDGKVSPKDDIETINTELILADLQTIEKVLPRLQKESRIKKDVAPKVKAVEEAKEILEKGDTLFAHGIVQGTERNELLHDLHLLTTKPFLYVFNVDEDELVDEDFKNEQRALVAPAEAIFLNAKLEADLAELDEEDALELLESVGAEEPGLATLARVGFNTLGLQTYLTAGPKETRAWTIKRGATAPEAAGVIHTDFQKGFIKAEVISFDDLVEAGSVAEARAKGKARMEGKDYVMRDGDVVEFRFNV

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Crispr_ID: NZ_CP023700_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023700_8

5422718-5422860

Orphan

Consensus_repeat	Method
GGCCTCCGCCGGCTCGGTGGTTCCCTCCACCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP023700_8

>merge|NZ_CP023700|8|5422718-5422860|PILER-CR
GGTCTCCGTCGGCTCGGTGGTTCCCTCGACCGCGTCGACCACCGGCTCAGCGGCCGCGGTCTTGCGGGTGCGGCGGCGACGCGGCTTCGCGGGCCCCTCGAGGGCTTCGGGGGCCTCCGCCGGCTCGGTGGTTCCCTCCGCCG

>NZ_CP023700|8|1|5422718-5422860|PILER-CR
GGTCTCCGTCGGCTCGGTGGTTCCCTCGACCG	CGTCGA
CCACCGGCTCAGCGGCCGCGGTCTTGCGGGTG	CGGCGGCGACGCGGCTTCGCGGGCCCCTCGAGGGCTTCGGGGGCCTCCGCCGGCTCGGTGGTT
CCCTCCGCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023700.1\|WP_016824717.1\|5425634_5425904_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016824718.1\|5424834_5425590_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|205967
NZ_CP023700.1\|WP_039830911.1\|5420182_5421085_+\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|224349
NZ_CP023700.1\|WP_016824711.1\|5433654_5434665_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|366597
NZ_CP023700.1\|WP_016824727.1\|5413539_5414658_-\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP023700.1\|WP_016824716.1\|5426095_5426323_-\|DUF3107-domain-containing-protein	unknown	unknown	gnl\|CDD\|378634
NZ_CP023700.1\|WP_004983713.1\|5417221_5417863_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_026084890.1\|5432387_5433452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016824723.1\|5419813_5419966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004983710.1\|5419125_5419731_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP023700.1\|WP_078495358.1\|5430588_5432286_+\|DUF3492-domain-containing-protein	unknown	unknown	gnl\|CDD\|340841
NZ_CP023700.1\|WP_039831496.1\|5421133_5422024_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023700.1\|WP_026084894.1\|5415158_5415743_+\|suppressor-of-fused-domain-protein	unknown	unknown	gnl\|CDD\|377450
NZ_CP023700.1\|WP_004983697.1\|5427735_5428809_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023700.1\|WP_150474964.1\|5428817_5430416_+\|DUF3152-domain-containing-protein	unknown	unknown	gnl\|CDD\|371483
NZ_CP023700.1\|WP_016824714.1\|5427318_5427546_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_016824728.1\|5412984_5413500_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023700.1\|WP_004983700.1\|5426475_5427120_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP023700.1\|WP_004983711.1\|5418185_5419043_+\|PHP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223686
NZ_CP023700.1\|WP_016824725.1\|5415773_5417033_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341027

Protein	Function_ID	Function_description	E-value
NZ_CP023700.1\|WP_016824718.1\|5424834_5425590_+\|hypothetical-protein	gnl\|CDD\|205967	pfam13794, MiaE_2, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.	4.98756e-95
NZ_CP023700.1\|WP_039830911.1\|5420182_5421085_+\|NYN-domain-containing-protein	gnl\|CDD\|224349	COG1432, COG1432, Uncharacterized conserved protein [Function unknown].	2.78315e-06
NZ_CP023700.1\|WP_016824711.1\|5433654_5434665_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|366597	pfam01370, Epimerase, NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.	4.18541e-40
NZ_CP023700.1\|WP_016824727.1\|5413539_5414658_-\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	6.27899e-172
NZ_CP023700.1\|WP_016824716.1\|5426095_5426323_-\|DUF3107-domain-containing-protein	gnl\|CDD\|378634	pfam11305, DUF3107, Protein of unknown function (DUF3107). Some members in this family of proteins are annotated as ATP-binding proteins however this cannot be confirmed. Currently no function is known.	1.48469e-35
NZ_CP023700.1\|WP_004983710.1\|5419125_5419731_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	4.25791e-42
NZ_CP023700.1\|WP_078495358.1\|5430588_5432286_+\|DUF3492-domain-containing-protein	gnl\|CDD\|340841	cd03813, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.	3.39207e-166
NZ_CP023700.1\|WP_039831496.1\|5421133_5422024_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.06024e-14
NZ_CP023700.1\|WP_026084894.1\|5415158_5415743_+\|suppressor-of-fused-domain-protein	gnl\|CDD\|377450	pfam05076, SUFU, Suppressor of fused protein (SUFU). SUFU, encoding the human orthologue of Drosophila suppressor of fused, appears to have a conserved role in the repression of Hedgehog signaling. SUFU exerts its repressor role by physically interacting with GLI proteins in both the cytoplasm and the nucleus. SUFU has been found to be a tumor-suppressor gene that predisposes individuals to medulloblastoma by modulating the SHH signaling pathway. Genomic contextual analysis of bacterial SUFU versions revealed that they are immunity proteins against diverse nuclease toxins in polymorphic toxin systems.	5.28881e-30
NZ_CP023700.1\|WP_004983697.1\|5427735_5428809_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.06137e-27
NZ_CP023700.1\|WP_150474964.1\|5428817_5430416_+\|DUF3152-domain-containing-protein	gnl\|CDD\|371483	pfam11350, DUF3152, Protein of unknown function (DUF3152). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	1.07556e-68
NZ_CP023700.1\|WP_016824725.1\|5415773_5417033_-\|MFS-transporter	gnl\|CDD\|341027	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.8563e-94
NZ_CP023700.1\|WP_004983711.1\|5418185_5419043_+\|PHP-domain-containing-protein	gnl\|CDD\|223686	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only].	9.60492e-49
NZ_CP023700.1\|WP_004983700.1\|5426475_5427120_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.92773e-16

>NZ_CP023700.1|WP_039831496.1|5421133_5422024_-|alpha/beta-hydrolase
MTSHPSPGPSPAPPHGARTRRLRTPRGEFAVVDVPPAAGVEEQGVALLLPGFTGSKEDFTLVHGPLAARGYRSVAVDGRGQYESDGPADDESAYAQDELARDVLAQAEALGGAVHLVGHSLGGQIARAAVLLDHTPFRSLTLVSSGPGRISVSQEQRVKLLRDALAVMSMAECWEAILAMGPPEEVGGPARGIGDREWLRRRWLGTEPAQLLATGRQLCAEPDRVAELAAVPLPFHVLSGTHDDTWPVTDLDEMAVRLEAHRTVVDGAEHSPNIDAPEPTARALADFWDGLRPGGR
>NZ_CP023700.1|WP_039830911.1|5420182_5421085_+|NYN-domain-containing-protein
MEAMNEDLTALNARIDRTNELLQRMLAEVAKTPSTHAIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGARRRIHTAEQQSIAELPDVKVRLGNLNANNQQKGVDSLIRTDLESLARHRAISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFFKPYVSRRTAPAYEPATGRPTREDVRFVGAQIAAKWLAARGRDTLVELLPGHPYLPGSVDQDLLVESEALLQYSLRGQADLRRALRDGFWGHLQSQY
>NZ_CP023700.1|WP_016824723.1|5419813_5419966_-|hypothetical-protein
MRFEIMRLDDVDGTPVDTTVVDAASVNRIVQQAAAIGQRLWIRPADTPTP
>NZ_CP023700.1|WP_004983710.1|5419125_5419731_+|MarC-family-protein
MFDVAVFGSLFLTLFVIMDPPGITPIFLALTAGRPAKAQKRMAFQAVCVAGGVIAVFGLLGHQILDYLHVSVPALMIAGGLLLLLIALDLLTGKTDEPQQTKDVNVALVPLGMPLLAGPGAIVSVILAVQKADGAAGQVSVWSAILAIHVVLWLAMRYSLLIIRVIKDGGVVLVTRLAGMMLSAIAVQQIINGVTQVVRGG
>NZ_CP023700.1|WP_004983711.1|5418185_5419043_+|PHP-domain-containing-protein
MRIDLHTHSTASDGTDTPADLVRKAGAAGLDVIALTDHDTTRGHAEALAALPAGLTLVTGAELSCRLDGVSMHLLAYLFDPEEPALLAERELVRDDRVPRAQGMIAKLNALGVPVTWEQVARIAGDGSVGRPHVAAALVELGVVPTVGDAFTQEWLADGGRAHVEKHETDPFEALRLVKGAGGVAVFAHPAASKRGRTVPESAIAELAEAGLDGIEVDHMDHDPGTRARLRGLAQELGLLVTGSSDYHGSRKTCVLGEFTTDPEVYGEITRRATGAFPVPGAGGV
>NZ_CP023700.1|WP_004983713.1|5417221_5417863_+|hypothetical-protein
MRGEPSCPKCGGRVRAPGLFSDAWECAVHGAVHPMQPVIPPSVEALEVVVRRTKVPVWMPWPLPVGWLFTGVACAGDDRSGGRATAVACTGPGPLGGMGELILVAEELGVGLGARYAGIDGPDPGPYMDVEKPAQTKVLAAGRPTPLWHVSKTPDDRAVFAGEALGMWLWAVVWPEQSGLLMYDELVLADLRDAGAEVELVPCGALSPRLLET
>NZ_CP023700.1|WP_016824725.1|5415773_5417033_-|MFS-transporter
MAPFDAGTGGILRQPKAVWATAGASVVAFMGIGLVDPILPSIAEGLDATAGQVSLLFTSYFLITAFAMLVTGFVSSRIGGRKTLLLGLALVVVFAGLSGTSGSVGELVGFRAGWGLGNALFVSTALAVIVGAAAGGGAAAILLYESALGLGMACGPLLGALLGDASWRYPFFGTAFLMAVGFLCIAAFLKEQPKPARRTSPLDPLRALGHGGLASTAVSAFFYNYTFFTVLAFTPFVLDMSPYRSGAVFFAWGVLLAVFSVIAAPRLQRRFGSLRVLGGSLVLLAADVLVLGYGDHTTAVVCTVLSGAFIGVNNTVYTELALGVSDAPRPVASAGYNFVRWFAAAAAPWFAPKIEEWTDAHVPFVVAAVTAVLGALVVAVRRRALALPHPRPHSGGGTPDAEHPQTRHAAGDGATALTN
>NZ_CP023700.1|WP_026084894.1|5415158_5415743_+|suppressor-of-fused-domain-protein
MADVLPLVEARLRTALGEPDARAAVTFLGTDRVEVLRFHEGDIVRYATLGMSAQPMADPTAVVADPVAGPRAELVLSVRAGLADTDKVLRPLAVLAASPQVEGVVVAPGASLDVGEPLWPGAPFTSVLVAEPGGLVEDLELDAPLDPVRFLPLLPMTPNEAAWKRVHGAQALQERWLTQGTDLRDPTRTSVPLE
>NZ_CP023700.1|WP_016824727.1|5413539_5414658_-|magnesium-and-cobalt-transport-protein-CorA
MSMIRDLRAVVRPSSRVSLRKENGPYDIPRDPATTTAVVDCAVYRDGRRLETEGPLGPQEAMRLVRRDGGFVWIGLHEPTEAEFAGIAREFGLHPLAVEDAVQAHQRPKLERYDDSLFTVFKTIHYLDHDRSGSSSEVIETGEVMCFTGRDFFITVRHGGQGSLRALRHRLQDDPELLSKGPSAVLHAIADHVVDGYLAVADAVQDDIDEVETEVFSPGRKGTPRGTDAGRIYQLKREVLEFKRAVAPLLRPMQLLSERPMRLIDPEIQKYFRDVADHVARVQEQVIGFDELLNSILQANLAQASVAQNEDMRKITSWAAIIAVPTMVCGVYGMNFTYMPETDWKYGYPLVLGITVAICLGIHRTLKRNGWL
>NZ_CP023700.1|WP_016824728.1|5412984_5413500_-|hypothetical-protein
MTSELLDRALIEEATKKSGLIWVEGPGTPARALWHVWHEGAACVVGDGPGEQPLPGLADGVPARVTVRSKDKGGRLVSWTARVVELPSGSEEWTAAVDGLKGKRLNAPDGEAMAQRWARECRVLRLEPTGETAPLPDGSLAEPPLPTPVTTRRPIPAGLHRLLRKKRRRQG
>NZ_CP023700.1|WP_016824718.1|5424834_5425590_+|hypothetical-protein
MTSSDKPDNAADAPETPAGHTGVAAMDWTAASADPQYRAAVVDLLGALAYGELAAFERLAEDAKLAPTLADKAELAKMASAEFHHFERLRDRLAGIGEEPTRAMEPFVAAYEGFHKQTAPSDWLEGLVKAYVGDSIASDFYREVAVRLDSDTRALVLTVLDDTGHGGFAVEKVRAAIDADPRVGGRLALWARRLMGEALSQSQRVVADRDALSTMLVGGVADGFDLAEVGRMFSRITEAHTKRMAALGLAA
>NZ_CP023700.1|WP_016824717.1|5425634_5425904_-|hypothetical-protein
MLLEALSSAILGLALAWAATRRLPHRFPARTLVLPTGAAGALFGAFVTHTALDAGNLLTVLLGAVTVSVASLSLLLRPAGRLRSRSATV
>NZ_CP023700.1|WP_016824716.1|5426095_5426323_-|DUF3107-domain-containing-protein
MEVKIGVQHAPREIVLESGQSAEEVERVVADALAGKSQLLSLVDEHGRKVLVPADRLAYIEIGEPAPRKVGFGAL
>NZ_CP023700.1|WP_004983700.1|5426475_5427120_-|TetR/AcrR-family-transcriptional-regulator
MTAIEQTEAARPRGTRLPRRARRNQLLGAAQEVFVAQGYHAAAMDDIAERAGVSKPVLYQHFPGKLDLYLALLDQHCESLIRSVRHALASTTDNKQRVRATMDAYFAYVEDDGGAFRLVFESDLTNEPAVRERVDKVTNDCAEAICDVIAEDTGLSRAESMLLASGLGGLAQVVARSWLHSDRSVPRDQAVQLLTSLAWRGIAGFPLHGNDQQH
>NZ_CP023700.1|WP_016824714.1|5427318_5427546_-|hypothetical-protein
MTVDPTDPETFEEDEDIREDQEFDVEAPVADAAEQQADVAPDRDDPLTELDPDRANEADLVEQARIVSLDEDDYR
>NZ_CP023700.1|WP_004983697.1|5427735_5428809_+|alpha/beta-hydrolase
MSSSEPPFVPPASVLPEVAAVRIAEGERLRSVELPGITLSVRSRPSAREGLPPALYVHGLGGSSLNWSALMPLLEDVVDGEAVDLPGFGDSPPPDDGDYSLTAHARAVIRYLDAAGRGPVHLFGNSLGGAVVTRVAAVRPDLVRTLTLVSPALPELRVQRTAVPTGLLAVPGVAPLFTRITREWTAEQRVRGVMALCYGDPARVSPEGFRNAVQEMERRLRLPYFWDAMARSARGLVNAYTLGGQHGLWRQAERVLAPTLLVYGGRDRLVGFRMARRAARAFRHSRLVTLPDAGHVAMMEYPGAVALAFRELLADATDSGNEGDTGEPGAKGAPGPVADTGTDEAGDGGATAENVRG
>NZ_CP023700.1|WP_150474964.1|5428817_5430416_+|DUF3152-domain-containing-protein
MGRHSRRGPAPKGDTANTTAGRGGRDGREAREQAGGVQGHGAPYGTPQGNPAHGPPVHGTPQGPPAHGGPQGTPAYGAPGHGAPGGGGAPRFADGTPAHGVPHLPDGWLPDGTPAHGVPRFPGGAPAHGVPRLPDGTPAHGVPRPPGTAPAHGTPRARGGHPEQREPGGGWGEPTGWTAAGHGAQAGAGLPLPRQRQAPPDGPRQDYLDAFAEDDDLFTFRRSASARPPDPYAAVTDWNTAPAPAVPSGPGDGAPPSGGPAQTGGGRGRTFTGIAAAAVTTVLAVVVAGQVADGPGGADAQAQSATDQVREVRDPASRGDDRETPAEASGAEQPTYEQKMERKYALGATFAGSGKFDAIPGIDKAPGRGQKITYRVDVEQGLGLDGELFAEAVQKTLNDNRSWAHNGARTFERVHSGRVDFVITLASPGTTADWCARSGLDTTVDNVSCDSAATERVMINAYRWAQGAETYGDRIHAYRQMLINHEIGHRLGHGHVTCDKDGDLAPVMQQQTKFVDHDGIDCRPNPWPYPKG
>NZ_CP023700.1|WP_078495358.1|5430588_5432286_+|DUF3492-domain-containing-protein
MRIGLLTESGYPYVSGDAGLWCDRLVRGLDQHEFDVYAFSRSEAQEDAGWVPLPPQVGRVRTAPLWTAEDDGVVHGRRARRRFTEHYGELAAVLCTAEAPAAPGAAQDAAPEADRFATALHGLAELARDEGGLVAALRSETAVRLLERACRAPRARRAAREARVPDLLTVAAHLEQALRPLSLDWYEEDGLGAVDLCHATAGGATALPGLLAHHFFGIPLLVTEYGVRLRAHYLSRPDSSPAVRSLLAAFHGRLAAETYRQAAFITPGNAHARRWQERCGADRAKLRTVHPGMDATPFDEVGESPESADPRTLVWVGRVEPAKDLVSLLHAFAQIHKEEPGTRLRVMGGPSGAEGADYLGHCKALAAQLFPDEAEGPHAVGDNPVSFEEIGGPDLPTVADAYASGAVTVLSSVVEGFPAGLVEAMFCGRATVSTDVGAVVEVIGGTGLVVPPRNPRALAEACVSLLRDPARRERLGAAARARALELFTVEQNVAAFHGLYLEIVARTPVHRLLLDDSGDPLPFAAPAEAHVPGHWTDLTPRAIPTWARNAPVRATAPAPVTEAVR
>NZ_CP023700.1|WP_026084890.1|5432387_5433452_+|hypothetical-protein
MHRHRELCERAVDPLEIAAGLEAHGVTDRTAARFRHRDVFSLAEELYARVPRDGGNRPSTAAVAPGARADWAVLTLLPGALCFASLTALRLTHGQTRLLAAAAGVLATALALRAALRRGPLSTGDHPSTAPRRSTAAFWTCWLVGYALLGDGLLDAAITGGPDGLPTGAAGGDWPLTAAPVLALALACTPAAWAAHLFSARARRRLVSSRGLEDFAASVRPVLLGTFALFLCALAALLALSAALLDEPFAPSRTLALGALLFLARLLTVHGFTHAPKVILTATVTAQAAALATVFAARLPGCDPLAAPVDTLATAWGPGAVPTLICGAAALTLLIHASRTLTRASAHTRPERPR
>NZ_CP023700.1|WP_016824711.1|5433654_5434665_+|NAD-dependent-epimerase/dehydratase-family-protein
MRVLLIGSNGYLGRFVADRLLADPAVQLTALGRGDDADVRFDLATGSPGALTRFLDAVHPGVVVNCAGATRGGARELTRHNTVAVATVCEALRRSGCGARLVQIGCSAEYGPSQPGSSTAEDAVPRPGGPYGVSKLAATELVLGSGLDAVVLRVFSPVGPGTPAGSPLGRLAEAMRRAMQSGDGELRLGGLGAQRDFVDVRDVARAVHAASLSAAQGVINIGSGRAVRLRDAAGILARVAGYGGALTEPDGPPGAHASPSPHASHAAHPAHLRATIGHPRTDSDHHAPPVAYPYPDGCGSWQQADVRTARDRLGWRPRINLEESLADIWMEAACRI

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	263510-263533	2	0.917
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	255900-255923	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NZ_LR134466	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence	5969-5992	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NZ_CP048428	Rhizobium daejeonense strain KACC 13094 plasmid unnamed4, complete sequence	76757-76780	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NC_014642	Achromobacter xylosoxidans A8 plasmid pA82, complete sequence	227680-227703	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NZ_CP023550	Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence	187478-187501	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	MK433577	Klebsiella phage ST512-KPC3phi13.6, complete genome	3640-3663	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	MK433581	Klebsiella phage ST258-KPC3phi16.1, complete genome	3640-3663	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	MK416011	Klebsiella phage ST437-OXA245phi4.1, complete genome	3640-3663	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_008537	Arthrobacter sp. FB24 plasmid 1, complete sequence	77315-77338	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	288297-288320	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	513079-513102	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	501851-501874	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	95699-95722	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	506755-506778	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	499499-499522	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1166403-1166426	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	855187-855210	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	759853-759876	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	385536-385559	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1288292-1288315	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	652453-652476	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	523292-523315	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	242159-242182	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	1220139-1220162	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	1190632-1190655	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	1287686-1287709	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	793077-793100	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	908835-908858	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	430446-430469	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	508167-508190	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1360882-1360905	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	1133177-1133200	3	0.875
NZ_CP023700_5	5.1\|4908238\|24\|NZ_CP023700\|CRISPRCasFinder	4908238-4908261	24	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	1220145-1220168	3	0.875
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	KY365739	Streptomyces phage BabyGotBac, complete genome	34461-34484	4	0.833
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	MH178382	Streptomyces phage Salete, complete genome	34458-34481	4	0.833
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	KU189325	Streptomyces phage Maih, complete genome	34460-34483	4	0.833
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	NC_028974	Streptomyces phage YDN12, complete genome	33900-33923	4	0.833
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	MH178381	Streptomyces phage BayC, complete genome	34458-34481	4	0.833
NZ_CP023700_3	3.1\|3820120\|24\|NZ_CP023700\|CRISPRCasFinder	3820120-3820143	24	KP876466	Streptomyces phage TP1604, complete genome	34461-34484	4	0.833
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_CP040764	Paracoccus sp. 2251 plasmid unnamed3, complete sequence	199777-199803	4	0.852
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	1030077-1030103	4	0.852
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1001617-1001643	4	0.852
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	138557-138583	5	0.815
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_CP035710	Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence	184794-184820	5	0.815
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	MN096365	Gordonia phage Samba, complete genome	36333-36359	5	0.815
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	332752-332778	6	0.778
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	324346-324372	6	0.778
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1488725-1488751	6	0.778
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NC_011892	Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence	238910-238936	6	0.778
NZ_CP023700_3	3.2\|3820168\|27\|NZ_CP023700\|CRISPRCasFinder	3820168-3820194	27	NZ_CP019314	Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence	2946-2972	6	0.778

1. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 2, identity: 0.917

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgcgcgcgc	Protospacer
***************** * ****

2. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
tgcgccgccgggggacgggggcgc	Protospacer
.*********..************

3. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NZ_LR134466 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 24, complete sequence) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
ggagccgccgaaggtcgggggcgc	Protospacer
 * *********** *********

4. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP048428 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cccgccgccgaaggacgggagcga	Protospacer
* *****************.***

5. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NC_014642 (Achromobacter xylosoxidans A8 plasmid pA82, complete sequence) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgctccgccgaaggaggggggcga	Protospacer
*** *********** *******

6. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP023550 (Rhodobacter sp. CZR27 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
ggcgccgccgaaggacgcgggctc	Protospacer
 **************** **** *

7. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to MK433577 (Klebsiella phage ST512-KPC3phi13.6, complete genome) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
ccagccgccgaaggacggcggcgc	Protospacer
*  *************** *****

8. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to MK433581 (Klebsiella phage ST258-KPC3phi16.1, complete genome) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
ccagccgccgaaggacggcggcgc	Protospacer
*  *************** *****

9. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to MK416011 (Klebsiella phage ST437-OXA245phi4.1, complete genome) position: , mismatch: 3, identity: 0.875

cgcgccgccgaaggacgggggcgc	CRISPR spacer
ccagccgccgaaggacggcggcgc	Protospacer
*  *************** *****

10. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_008537 (Arthrobacter sp. FB24 plasmid 1, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
cccggtcaccgatcaggcctcccc	Protospacer
************** *******

11. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
cccggccaccgatccggccgccgc	Protospacer
*****.************* ***

12. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

13. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

14. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

15. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

16. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

17. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

18. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

19. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

20. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

21. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

22. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

23. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

24. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
cccggtcaccgacccggccgccgc	Protospacer
************.****** ***

25. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

26. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

27. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

28. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

29. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

30. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

31. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

32. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

33. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

34. spacer 5.1|4908238|24|NZ_CP023700|CRISPRCasFinder matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 3, identity: 0.875

cccggtcaccgatccggcctccgg	CRISPR spacer
gccggtcaccgacccggtctccgg	Protospacer
 ***********.****.******

35. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

36. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to MH178382 (Streptomyces phage Salete, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

37. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to KU189325 (Streptomyces phage Maih, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

38. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to NC_028974 (Streptomyces phage YDN12, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

39. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to MH178381 (Streptomyces phage BayC, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

40. spacer 3.1|3820120|24|NZ_CP023700|CRISPRCasFinder matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 4, identity: 0.833

cgcgccgccgaaggacgggggcgc	CRISPR spacer
cgcgccgccgaaggacgggatggg	Protospacer
*******************.  *

41. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_CP040764 (Paracoccus sp. 2251 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.852

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
cagcgagcccgacgcgggcgcggccag	Protospacer
 ********** ******** *****

42. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
gaccgagcccaccgcgggcgaggcgct	Protospacer
** *******.*************  *

43. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 4, identity: 0.852

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
cagcgaccccgccgcgagcgaggccgt	Protospacer
 ***** *********.********.*

44. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 5, identity: 0.815

gagcgagcccgccgcgggcgaggccat-	CRISPR spacer
caccgagcccgccgcgggcga-gcggtg	Protospacer
 * ****************** ** .*

45. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_CP035710 (Sphaerotilus natans subsp. sulfidivorans strain D-507 plasmid pSna507_unt10, complete sequence) position: , mismatch: 5, identity: 0.815

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
gtggcagcccgccgcggccgaggccac	Protospacer
* *  ************ ********.

46. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to MN096365 (Gordonia phage Samba, complete genome) position: , mismatch: 5, identity: 0.815

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
gagcgaacgcgccgcgggcgaggtccg	Protospacer
******.* **************.*

47. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
tgcccagcccgccgcgggcgaagccaa	Protospacer
 . * ****************.****

48. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.778

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
tggcgtgcccgccgcgggcgagggcgc	Protospacer
 .*** ***************** *..

49. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.778

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
tggcgtgcccgccgcgggcgagggcgc	Protospacer
 .*** ***************** *..

50. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 6, identity: 0.778

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
gggcgagcccgccgcggccgaggagcc	Protospacer
*.*************** *****   .

51. spacer 3.2|3820168|27|NZ_CP023700|CRISPRCasFinder matches to NZ_CP019314 (Tateyamaria omphalii strain DOK1-4 plasmid pDOK1-4-2, complete sequence) position: , mismatch: 6, identity: 0.778

gagcgagcccgccgcgggcgaggccat	CRISPR spacer
ccgcgagcccgacgcgggcgagggccg	Protospacer
  ********* *********** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59947 : 105382

Ostreococcus_lucimarinus_virus(20.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_026085593.1\|59947_60718_-\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_016828462.1\|61281_62364_+\|transposase	transposase	NA	NA	NA	NA
WP_016828461.1\|62455_62737_-	hypothetical protein	NA	NA	NA	NA
WP_016828460.1\|64991_65228_-	DUF397 domain-containing protein	NA	NA	NA	NA
WP_039831387.1\|65228_66128_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016828458.1\|66329_67829_+	hypothetical protein	NA	NA	NA	NA
WP_016828457.1\|67886_68891_+	asparaginase	NA	NA	NA	NA
WP_016828456.1\|68918_69386_+	DNA-binding protein	NA	NA	NA	NA
WP_016828455.1\|69472_70831_+	hypothetical protein	NA	NA	NA	NA
WP_016828454.1\|70848_71586_+	hypothetical protein	NA	NA	NA	NA
WP_026085591.1\|71727_72795_-	aldo/keto reductase	NA	NA	NA	NA
WP_026085590.1\|72791_73250_-	ATP-binding protein	NA	NA	NA	NA
WP_026085589.1\|74157_74373_+	hypothetical protein	NA	NA	NA	NA
WP_016828450.1\|75015_75444_+	hypothetical protein	NA	NA	NA	NA
WP_026085588.1\|75762_77664_+	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_106431199.1\|77965_79180_+	sensor histidine kinase	NA	NA	NA	NA
WP_016828447.1\|79172_79604_+	roadblock/LC7 domain-containing protein	NA	NA	NA	NA
WP_026085587.1\|79600_79957_+	DUF742 domain-containing protein	NA	NA	NA	NA
WP_016828445.1\|79937_80537_+	ATP/GTP-binding protein	NA	NA	NA	NA
WP_106431113.1\|80443_81814_+	cytochrome P450	NA	NA	NA	NA
WP_016828443.1\|81780_83016_+	cytochrome P450	NA	NA	NA	NA
WP_016828442.1\|83123_83618_+	hypothetical protein	NA	NA	NA	NA
WP_016828440.1\|84384_84840_+	hypothetical protein	NA	NA	NA	NA
WP_016828439.1\|85588_85903_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004993803.1\|86151_86928_+	2-hydroxypenta-2,4-dienoate hydratase	NA	NA	NA	NA
WP_106431198.1\|86992_87844_+	acetaldehyde dehydrogenase	G9E526	Ostreococcus_lucimarinus_virus	3.5e-20	29.0
WP_004993800.1\|87836_88859_+	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	2.8e-48	37.0
WP_004993799.1\|88855_89884_+	beta-ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_016828437.1\|89880_90108_+	acyl carrier protein	NA	NA	NA	NA
WP_016828436.1\|90113_90989_+	CoA ester lyase	NA	NA	NA	NA
WP_016828435.1\|91003_91525_+	MaoC family dehydratase	NA	NA	NA	NA
WP_106431197.1\|91521_92724_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_026085586.1\|92841_94254_+	hypothetical protein	NA	NA	NA	NA
WP_016828432.1\|94430_95327_+	aminoglycoside phosphotransferase family protein	NA	NA	NA	NA
WP_016828431.1\|95549_96509_+	hypothetical protein	NA	NA	NA	NA
WP_016828430.1\|96542_97688_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_144055296.1\|97785_99249_+	hypothetical protein	NA	NA	NA	NA
WP_026085584.1\|99895_101539_+	hypothetical protein	NA	NA	NA	NA
WP_016828426.1\|101551_102274_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_004993782.1\|102284_102497_+	hypothetical protein	NA	NA	NA	NA
WP_026085583.1\|102819_103152_+\|transposase	transposase	A0A2P1JR43	Mycobacterium_phage	1.7e-07	40.5
WP_016828320.1\|103349_104411_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_078495504.1\|104461_104797_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.9e-17	45.0
WP_078495503.1\|104878_105382_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.3e-42	56.8

DBSCAN-SWA_2

108579 : 177699

Streptococcus_phage(10.0%)

tail,transposase,integrase

attL 122267:122284|attR 175544:175561

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016828422.1\|108579_109293_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	9.4e-27	33.5
WP_016828421.1\|109431_110319_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_016828420.1\|110328_110877_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_016828419.1\|111084_111984_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_016828418.1\|112114_112993_+	NAD(P)H-binding protein	M4QPK0	Synechococcus_phage	1.5e-05	24.3
WP_051044567.1\|113234_114140_+	DMT family transporter	NA	NA	NA	NA
WP_016828416.1\|114238_115609_+	amidohydrolase family protein	NA	NA	NA	NA
WP_016828413.1\|116581_116920_-	hypothetical protein	NA	NA	NA	NA
WP_078495552.1\|117103_117577_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA
WP_106431196.1\|117770_118217_+	hypothetical protein	NA	NA	NA	NA
WP_016828410.1\|118548_119280_+	hypothetical protein	NA	NA	NA	NA
WP_144055287.1\|119468_121562_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_016828408.1\|121870_122065_-	hypothetical protein	NA	NA	NA	NA
WP_039831385.1\|122242_122449_-	hypothetical protein	NA	NA	NA	NA
122267:122284	attL	NA	NA	NA	NA
WP_016828406.1\|122853_123537_+	haloacid dehalogenase type II	NA	NA	NA	NA
WP_026085582.1\|123741_124542_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_016828404.1\|124574_124931_-	hypothetical protein	NA	NA	NA	NA
WP_016828403.1\|124927_125113_-	hypothetical protein	NA	NA	NA	NA
WP_063744531.1\|125212_125947_+	hypothetical protein	NA	NA	NA	NA
WP_016828401.1\|126173_131114_+	hypothetical protein	NA	NA	NA	NA
WP_026085581.1\|131632_133621_-	DNA recombination protein RecN	NA	NA	NA	NA
WP_026085580.1\|138430_138796_+	helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	9.1e-10	47.0
WP_051044473.1\|138817_139159_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016828394.1\|139203_140250_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_026085579.1\|140361_141891_+	monooxygenase	NA	NA	NA	NA
WP_078495502.1\|141905_142232_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016828391.1\|142288_142633_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.0e-26	57.4
WP_026085578.1\|142663_143638_-	thioredoxin-disulfide reductase	A0A2K9L4X0	Tupanvirus	3.2e-70	46.1
WP_016828389.1\|143634_144048_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	8.1e-15	40.2
WP_026085577.1\|144143_144452_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016828387.1\|144448_145549_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_016828386.1\|145545_146598_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	5.8e-73	50.7
WP_016828385.1\|146694_147237_+	DinB family protein	NA	NA	NA	NA
WP_039831857.1\|147529_147808_+	hypothetical protein	NA	NA	NA	NA
WP_016828383.1\|147830_148601_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	1.2e-54	46.2
WP_016828381.1\|149492_150011_-	hypothetical protein	NA	NA	NA	NA
WP_039831854.1\|150093_151839_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_026085576.1\|151922_152945_-\|integrase	tyrosine-type recombinase/integrase	A0A0P0I3D2	Lactobacillus_phage	5.9e-06	31.3
WP_078495501.1\|153678_153972_-	MerR family DNA-binding protein	NA	NA	NA	NA
WP_051044471.1\|154816_155326_+	hypothetical protein	NA	NA	NA	NA
WP_106431112.1\|155264_155657_-\|transposase	transposase	NA	NA	NA	NA
WP_039831384.1\|156091_157708_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_039831852.1\|158202_159426_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_086019050.1\|160486_161303_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_106431195.1\|161398_161887_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_026085572.1\|162097_162706_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	1.9e-15	26.2
WP_016828366.1\|162702_163572_+	membrane protein	NA	NA	NA	NA
WP_078495550.1\|163588_165433_+	di-trans,poly-cis-decaprenylcistransferase	NA	NA	NA	NA
WP_026085571.1\|165848_166619_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_078495549.1\|166672_167023_-	hypothetical protein	NA	NA	NA	NA
WP_026085570.1\|167396_168329_+	glutaminase	NA	NA	NA	NA
WP_106431194.1\|168523_168907_-	hypothetical protein	NA	NA	NA	NA
WP_078495496.1\|168780_169245_+\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_039831849.1\|169462_169780_+	hypothetical protein	NA	NA	NA	NA
WP_016828354.1\|170242_172504_+	hypothetical protein	NA	NA	NA	NA
WP_039831382.1\|172722_173049_+	hypothetical protein	NA	NA	NA	NA
WP_026085569.1\|173204_174320_+\|transposase	transposase	NA	NA	NA	NA
WP_016828351.1\|174514_175978_-	short-chain fatty acid transporter	NA	NA	NA	NA
175544:175561	attR	NA	NA	NA	NA
WP_026085568.1\|176613_177699_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

183629 : 264587

Staphylococcus_phage(25.0%)

transposase,integrase

attL 191309:191326|attR 266675:266692

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016828347.1\|183629_183935_+\|transposase	transposase	NA	NA	NA	NA
WP_016828346.1\|183931_184825_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_026085567.1\|185673_187125_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.5e-47	33.1
WP_144055286.1\|187336_187894_-	hypothetical protein	NA	NA	NA	NA
WP_016828343.1\|189420_190434_-	DNA-directed RNA polymerase subunit alpha	NA	NA	NA	NA
191309:191326	attL	NA	NA	NA	NA
WP_016828341.1\|192077_192425_+	hypothetical protein	NA	NA	NA	NA
WP_016828340.1\|192650_192968_-	hypothetical protein	NA	NA	NA	NA
WP_016828338.1\|194515_195868_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_051044565.1\|196263_196920_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	7.8e-44	53.1
WP_016828336.1\|197174_197444_+	hypothetical protein	NA	NA	NA	NA
WP_106431193.1\|197530_198232_+	hypothetical protein	NA	NA	NA	NA
WP_016828333.1\|198388_199588_+	DUF4263 domain-containing protein	NA	NA	NA	NA
WP_144055285.1\|199520_199961_-	hypothetical protein	NA	NA	NA	NA
WP_106431111.1\|199902_202665_+	MMPL family transporter	NA	NA	NA	NA
WP_063744530.1\|202682_203759_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_026085566.1\|203844_205065_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	NA	NA	NA
WP_026085565.1\|205103_206282_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_026085564.1\|206199_206538_+	acyl carrier protein	NA	NA	NA	NA
WP_016828324.1\|207840_208632_-	hypothetical protein	NA	NA	NA	NA
WP_016828323.1\|208624_209641_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_106431110.1\|210737_211658_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.9e-73	53.3
WP_016828320.1\|211708_212770_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_078495492.1\|213907_214117_-	hypothetical protein	NA	NA	NA	NA
WP_026085561.1\|214784_216056_+	DNA cytosine methyltransferase	D4P849	Rhodococcus_phage	1.5e-62	38.5
WP_016828315.1\|216055_217174_+	hypothetical protein	NA	NA	NA	NA
WP_026085607.1\|218352_219069_-	NADPH-dependent F420 reductase	NA	NA	NA	NA
WP_016828309.1\|220174_221179_-	DUF2889 domain-containing protein	NA	NA	NA	NA
WP_016828308.1\|221398_223000_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	2.8e-18	26.2
WP_016828307.1\|223097_225416_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_026085559.1\|225601_226342_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_016828305.1\|226365_227889_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.5e-29	24.0
WP_016828304.1\|228368_228704_-	hypothetical protein	NA	NA	NA	NA
WP_016828303.1\|229082_229733_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_016828302.1\|230224_231178_+	N-acetyltransferase	NA	NA	NA	NA
WP_086019049.1\|231555_232905_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_016828300.1\|233059_233860_+	SDR family oxidoreductase	A0A0G2Y924	Acanthamoeba_polyphaga_mimivirus	1.8e-05	32.3
WP_106431192.1\|234812_236051_+	MFS transporter	NA	NA	NA	NA
WP_016828298.1\|236147_236711_+	hypothetical protein	NA	NA	NA	NA
WP_016828297.1\|236773_237940_-	hypothetical protein	NA	NA	NA	NA
WP_026085556.1\|237936_238341_-	hypothetical protein	NA	NA	NA	NA
WP_016828295.1\|238705_239518_+	hypothetical protein	NA	NA	NA	NA
WP_026085555.1\|239594_240632_+	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_016828293.1\|240628_242134_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA
WP_016828292.1\|242394_243549_-	hypothetical protein	NA	NA	NA	NA
WP_026085554.1\|243586_244690_-	CoA transferase	NA	NA	NA	NA
WP_016828290.1\|244758_245811_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_016828289.1\|245926_246688_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_016828288.1\|246730_247924_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_016828287.1\|248020_248824_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_016828286.1\|248894_250349_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_016828285.1\|250618_251584_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA
WP_016828284.1\|251845_253000_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_026085553.1\|253190_254147_-	oxidoreductase	V5UTY8	Synechococcus_phage	2.1e-05	37.3
WP_078495546.1\|256037_257948_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_016828278.1\|259011_259209_+	hypothetical protein	NA	NA	NA	NA
WP_026085552.1\|259288_260062_+\|transposase	IS5/IS1182 family transposase	NA	NA	NA	NA
WP_016828276.1\|260346_261288_+	hypothetical protein	NA	NA	NA	NA
WP_016828274.1\|262322_264587_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
266675:266692	attR	NA	NA	NA	NA

DBSCAN-SWA_4

271608 : 317548

Burkholderia_phage(100.0%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016828267.1\|271608_272694_-\|transposase	transposase	NA	NA	NA	NA
WP_016828266.1\|273114_274506_-	hypothetical protein	NA	NA	NA	NA
WP_026085550.1\|274493_275591_-	hypothetical protein	NA	NA	NA	NA
WP_016828264.1\|275587_276604_-	phosphotransferase	NA	NA	NA	NA
WP_016828263.1\|276600_277611_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_016828262.1\|277607_278927_-	hypothetical protein	NA	NA	NA	NA
WP_004993499.1\|278923_279199_-	acyl carrier protein	NA	NA	NA	NA
WP_016828261.1\|279205_280384_-	radical SAM protein	NA	NA	NA	NA
WP_026085549.1\|280391_281669_-	MFS transporter	NA	NA	NA	NA
WP_026085548.1\|282664_283942_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_106431109.1\|284149_285697_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_026085546.1\|285896_287354_+\|transposase	transposase	NA	NA	NA	NA
WP_106431190.1\|287978_289118_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_026085544.1\|290082_291672_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_026085543.1\|291790_292429_+	hypothetical protein	NA	NA	NA	NA
WP_016828250.1\|293307_294054_+	VWA domain-containing protein	NA	NA	NA	NA
WP_016828249.1\|294502_294832_+\|transposase	transposase	A9YX41	Burkholderia_phage	5.5e-06	30.5
WP_144055283.1\|294819_295059_+\|transposase	transposase	NA	NA	NA	NA
WP_016828245.1\|295752_297012_-	hypothetical protein	NA	NA	NA	NA
WP_026085542.1\|297013_297892_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_078495545.1\|298206_299907_+	AMP-binding protein	NA	NA	NA	NA
WP_144055282.1\|299791_300106_-	hypothetical protein	NA	NA	NA	NA
WP_078495489.1\|300104_300611_+\|transposase	transposase	NA	NA	NA	NA
WP_106431189.1\|300665_302033_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_016828241.1\|302221_303652_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_016828240.1\|303648_304434_-	hypothetical protein	NA	NA	NA	NA
WP_016828239.1\|304630_306043_+	hypothetical protein	NA	NA	NA	NA
WP_016828238.1\|306129_306381_-	hypothetical protein	NA	NA	NA	NA
WP_016828237.1\|306406_306598_-	hypothetical protein	NA	NA	NA	NA
WP_144055280.1\|306745_307024_-	hypothetical protein	NA	NA	NA	NA
WP_078495488.1\|309080_310082_+	S1 family peptidase	NA	NA	NA	NA
WP_026085541.1\|310542_311634_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_106431107.1\|311746_312262_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016828229.1\|312258_312834_+	hypothetical protein	NA	NA	NA	NA
WP_106431106.1\|312860_313412_-	hypothetical protein	NA	NA	NA	NA
WP_004993456.1\|314805_315483_+	HdeD family acid-resistance protein	NA	NA	NA	NA
WP_026085540.1\|315675_316620_+	diacylglycerol kinase	NA	NA	NA	NA
WP_078495486.1\|317314_317548_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

353960 : 418549

Gordonia_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_106431105.1\|353960_354293_-\|transposase	transposase	NA	NA	NA	NA
WP_016828180.1\|354861_355161_-\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	5.9e-07	38.0
WP_026085533.1\|355827_356502_+	response regulator transcription factor	NA	NA	NA	NA
WP_016828176.1\|356636_357470_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-30	36.8
WP_016828175.1\|357466_359998_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_016828174.1\|360207_361605_+	MFS transporter	NA	NA	NA	NA
WP_016828173.1\|361601_362822_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_099156290.1\|363064_363250_-	hypothetical protein	NA	NA	NA	NA
WP_078495482.1\|364094_364346_-	hypothetical protein	NA	NA	NA	NA
WP_078495544.1\|364536_364938_-	hypothetical protein	NA	NA	NA	NA
WP_004993398.1\|366456_367362_+	TIGR03619 family F420-dependent LLM class oxidoreductase	NA	NA	NA	NA
WP_016828170.1\|367458_368229_+	hypothetical protein	NA	NA	NA	NA
WP_026085530.1\|368304_369156_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_004993394.1\|370242_370701_-	DUF4383 domain-containing protein	NA	NA	NA	NA
WP_016828165.1\|370864_371434_-	hypothetical protein	NA	NA	NA	NA
WP_144055279.1\|372353_372674_+\|transposase	transposase	A0A1B3AZF8	Gordonia_phage	1.8e-06	41.1
WP_150474888.1\|372670_373543_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.1e-24	32.5
WP_004993386.1\|375380_376040_-	LysE family translocator	NA	NA	NA	NA
WP_026085527.1\|377152_377734_+\|transposase	transposase	NA	NA	NA	NA
WP_004993381.1\|377813_378059_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_026085526.1\|378025_379153_-	peptide chain release factor 2	NA	NA	NA	NA
WP_016828157.1\|379336_380071_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_016828156.1\|381152_381812_-	hypothetical protein	NA	NA	NA	NA
WP_016828155.1\|381844_383746_-	RiPP maturation radical SAM protein 1	NA	NA	NA	NA
WP_016828154.1\|384054_385884_-	S9 family peptidase	NA	NA	NA	NA
WP_004993370.1\|385880_387131_-	MFS transporter	NA	NA	NA	NA
WP_016828152.1\|387965_389030_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_004993364.1\|390234_390609_-	hypothetical protein	NA	NA	NA	NA
WP_026085523.1\|391081_391447_-	hypothetical protein	NA	NA	NA	NA
WP_026085522.1\|391536_392613_-	hypothetical protein	NA	NA	NA	NA
WP_026085521.1\|392709_395040_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_026085520.1\|395419_395686_+\|transposase	transposase	NA	NA	NA	NA
WP_039831635.1\|395783_397367_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_016828146.1\|397381_398095_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016828145.1\|398033_398537_-	hypothetical protein	NA	NA	NA	NA
WP_016828143.1\|399279_399852_-	hypothetical protein	NA	NA	NA	NA
WP_016828142.1\|399848_401246_-	hypothetical protein	NA	NA	NA	NA
WP_004993350.1\|401242_402049_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.3e-11	28.9
WP_004993348.1\|402084_402897_-	hypothetical protein	NA	NA	NA	NA
WP_050793921.1\|402908_403412_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_016828141.1\|404240_404444_-	hypothetical protein	NA	NA	NA	NA
WP_016828140.1\|404440_404794_-	hypothetical protein	NA	NA	NA	NA
WP_016828139.1\|405094_405727_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_016828138.1\|405828_406743_+	NmrA/HSCARG family protein	NA	NA	NA	NA
WP_026085516.1\|407911_408799_-	DUF3152 domain-containing protein	NA	NA	NA	NA
WP_004993338.1\|408962_409649_+	response regulator transcription factor	W8CYM9	Bacillus_phage	9.0e-35	33.3
WP_039831822.1\|409795_411277_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.7e-17	30.3
WP_016828134.1\|411273_411885_+	hypothetical protein	NA	NA	NA	NA
WP_004993333.1\|413351_413597_-	DUF1622 domain-containing protein	NA	NA	NA	NA
WP_016828132.1\|413593_414016_-	DUF1622 domain-containing protein	NA	NA	NA	NA
WP_016828129.1\|417382_417739_+	hypothetical protein	NA	NA	NA	NA
WP_106431102.1\|417728_418549_-\|transposase	IS5 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023700

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection