CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP023694	Streptomyces coeruleorubidus strain ATCC 13740 chromosome, complete genome	12 crisprs	csa3,DEDDh,WYL,Cas9_archaeal,cas3,c2c9_V-U4,DinG	2	4	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP023694_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_1

208447-208737

Orphan

Consensus_repeat	Method
GACACAGCCGCGCCAGGCCCGGAC	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP023694_1

>merge|NZ_CP023694|1|208447-208737|CRISPRCasFinder
GACGCAGCCCCGGCGGACACGGACGGCGACACCGTCACAGCGGGCGCGGACAGTGACACAGCCGCGCCAGGCCCGGACAGTCTTGCCGGCACGACGGAACCGAGCAGCGACACAGCCGCGGCAGGCCCGGACGGCAAGGTGGACACGAAGGAATCGGACGGCAACACGGCCCCGGCGAACGCGGACGACACAGTCGCGGCAGAGCCGGACGGTGGCGTCGGCACGCGGGAGCCAGACAGCGTCACGACCCCGGGGGCCACGGACGACGGCACGGCCGCGGCGCACGCGGAC

>NZ_CP023694|1|1|208447-208737|CRISPRCasFinder
GACGCAGCCCCGGCGGACACGGAC	GGCGACACCGTCACAGCGGGCGCGGACAGT
GACACAGCCGCGCCAGGCCCGGAC	AGTCTTGCCGGCACGACGGAACCGAGCAGC
GACACAGCCGCGGCAGGCCCGGAC	GGCAAGGTGGACACGAAGGAATCGGACGGCAACACGGCCCCGGCGAACGCGGAC
GACACAGTCGCGGCAGAGCCGGAC	GGTGGCGTCGGCACGCGGGAGCCAGACAGCGTCACGACCCCGGGGGCCACGGACGAC
GGCACGGCCGCGGCGCACGCGGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_167537250.1\|200110_200740_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227803
NZ_CP023694.1\|WP_150478560.1\|211263_212106_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP023694.1\|WP_167537251.1\|220506_222276_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP023694.1\|WP_150478553.1\|200750_201653_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP023694.1\|WP_150478565.1\|219271_220381_-\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|224981
NZ_CP023694.1\|WP_150478564.1\|217721_219275_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236215
NZ_CP023694.1\|WP_150478567.1\|222286_222478_-\|DUF2795-domain-containing-protein	unknown	unknown	gnl\|CDD\|378655
NZ_CP023694.1\|WP_150478557.1\|205345_206146_-\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181122
NZ_CP023694.1\|WP_150478550.1\|198342_199482_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP023694.1\|WP_150478551.1\|199554_200052_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185377
NZ_CP023694.1\|WP_150478554.1\|202161_203328_-\|thiolase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181378
NZ_CP023694.1\|WP_010033039.1\|201836_202079_-\|DUF397-domain-containing-protein	unknown	unknown	gnl\|CDD\|377231
NZ_CP023694.1\|WP_150478563.1\|216343_217609_-\|DUF418-domain-containing-protein	unknown	unknown	gnl\|CDD\|225193
NZ_CP023694.1\|WP_150478555.1\|203324_204389_-\|lipid-transfer-protein	unknown	unknown	gnl\|CDD\|181173
NZ_CP023694.1\|WP_150478556.1\|204385_205327_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|224462
NZ_CP023694.1\|WP_150478561.1\|212173_213700_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|181381
NZ_CP023694.1\|WP_150478559.1\|210487_211201_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|184875
NZ_CP023694.1\|WP_150478562.1\|213855_216294_+\|acylase	unknown	unknown	gnl\|CDD\|376618
NZ_CP023694.1\|WP_150478558.1\|206322_207942_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236100
NZ_CP023694.1\|WP_150478568.1\|222574_224188_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_167537250.1\|200110_200740_-\|hypothetical-protein	gnl\|CDD\|227803	COG5516, COG5516, Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding [General function prediction only].	4.89916e-11
NZ_CP023694.1\|WP_150478560.1\|211263_212106_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.00411e-23
NZ_CP023694.1\|WP_167537251.1\|220506_222276_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.44726e-56
NZ_CP023694.1\|WP_150478553.1\|200750_201653_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	3.83337e-21
NZ_CP023694.1\|WP_150478565.1\|219271_220381_-\|nitronate-monooxygenase	gnl\|CDD\|224981	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only].	2.10206e-57
NZ_CP023694.1\|WP_150478564.1\|217721_219275_-\|AMP-binding-protein	gnl\|CDD\|236215	PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP023694.1\|WP_150478567.1\|222286_222478_-\|DUF2795-domain-containing-protein	gnl\|CDD\|378655	pfam11387, DUF2795, Protein of unknown function (DUF2795). This family of proteins has no known function.	2.4746e-13
NZ_CP023694.1\|WP_150478557.1\|205345_206146_-\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181122	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein.	1.07321e-152
NZ_CP023694.1\|WP_150478550.1\|198342_199482_+\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	5.02186e-14
NZ_CP023694.1\|WP_150478551.1\|199554_200052_-\|hypothetical-protein	gnl\|CDD\|185377	PRK15480, PRK15480, glucose-1-phosphate thymidylyltransferase RfbA; Provisional.	0.00751066
NZ_CP023694.1\|WP_150478554.1\|202161_203328_-\|thiolase-domain-containing-protein	gnl\|CDD\|181378	PRK08313, PRK08313, thiolase domain-containing protein.	0
NZ_CP023694.1\|WP_010033039.1\|201836_202079_-\|DUF397-domain-containing-protein	gnl\|CDD\|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	4.42301e-12
NZ_CP023694.1\|WP_150478563.1\|216343_217609_-\|DUF418-domain-containing-protein	gnl\|CDD\|225193	COG2311, COG2311, Predicted membrane protein [Function unknown].	2.19594e-45
NZ_CP023694.1\|WP_150478555.1\|203324_204389_-\|lipid-transfer-protein	gnl\|CDD\|181173	PRK07937, PRK07937, lipid-transfer protein; Provisional.	0
NZ_CP023694.1\|WP_150478556.1\|204385_205327_-\|DNA-binding-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	6.26451e-23
NZ_CP023694.1\|WP_150478561.1\|212173_213700_-\|AMP-binding-protein	gnl\|CDD\|181381	PRK08316, PRK08316, acyl-CoA synthetase; Validated.	0
NZ_CP023694.1\|WP_150478559.1\|210487_211201_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|184875	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional.	3.17481e-26
NZ_CP023694.1\|WP_150478562.1\|213855_216294_+\|acylase	gnl\|CDD\|376618	pfam01804, Penicil_amidase, Penicillin amidase. Penicillin amidase or penicillin acylase EC:3.5.1.11 catalyzes the hydrolysis of benzylpenicillin to phenylacetic acid and 6-aminopenicillanic acid (6-APA) a key intermediate in the the synthesis of penicillins. Also in the family is cephalosporin acylase and aculeacin A acylase which are involved in the synthesis of related peptide antibiotics.	1.83681e-125
NZ_CP023694.1\|WP_150478558.1\|206322_207942_+\|AMP-binding-protein	gnl\|CDD\|236100	PRK07798, PRK07798, acyl-CoA synthetase; Validated.	0
NZ_CP023694.1\|WP_150478568.1\|222574_224188_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	3.15133e-69

>NZ_CP023694.1|WP_150478558.1|206322_207942_+|AMP-binding-protein
MEYNLADLFESVVDVVPDREALVYVDHPGTGAERRLTYAELDAAANRVGHHLLDSGIRPGEHLGLHLYNGVEYLQTVLGCLKARIVPVNVNYRYVEEELVYLYRDADLVGLVFDAEFTDRVAAARPRAEKLRHLIRVGAPTPGAAAVPCVEFAQVEAAGSPERGFPDRSGDDQFIIYTGGTTGMPKGVMWRQEDLFFAGLGGGAPTGEPVKKPEELAERVAAGGAGITFFPTAPLMHGTSTLTAFIGFNFGQRVVIHRKFVPEEVLRTVEKEKVSSISLVGDAMLRPLIDALRGPLRDIDRSSLFSVSSSGAIMSDTVRRQFRELVPNAMLLNNFGSSESGFNGTATEDSGPERGFRVRVHARTQVVDPATYEPVSPGEVGRVAQCGHVPLGYYNDPAKTAATFFEKDGRRWVLLGDMATVDEEGVVTVLGRGSQCINTGGEKVYPEEVEQALKSHPDVYDALVAGVPDPQWGHHVAAVVQLRDGAARPSLEDIQTHCRDRLAGYKIPRQLVITESVQRSPSGKADYRWAREVAVAADG
>NZ_CP023694.1|WP_150478557.1|205345_206146_-|crotonase/enoyl-CoA-hydratase-family-protein
MGGTEHLTVRREGATLVLTLNRPEARNALSLPMLVGLHDGWLEADADDSVRSIVFTGAGGSFCSGMDLKALAGNGMAGEEYRDRLKADPDLHWKAMLRHHRPRKPVIAAVEGYCVAGGTEMLQGTDIRVAGESATFGLFEVKRGLFPIGGSTVRLQRQIPRTHALEMLLTGRPYSAREAAAIGLIGHVVPDGTALAKALEIAELINSCGPLAVEAVKACVYETAEMTESDGLAAELTRGWPVFDTADAKEGARAFAEKRPPVYKRA
>NZ_CP023694.1|WP_150478556.1|204385_205327_-|DNA-binding-protein
MPEVLKAPLVVEFPFTRSLGPVQSAFLTGLRERVVLGVRTADGRTLVPPVEYDPVTAEDIRDLVEVAPTGTVTTWAWNHAPRRGQPLTTPFAWVLVRLDGADTALLHALDAPGPDAVHTGMRVRIRWAAERTGAITDIACFEPYDGDRAQPAGHTGEFEDPVTGIVAAARLDYTYSPGRAQTAYINALSGRRTVGERCPSCRKVYVPPRGACPTCGVATSEQVEVGPRGTVTTFCIVNIKAKNLDIEVPYVYAHIALDGADLALHGRIGGIPYDEVRMGLRVEPVWTEGSRYPDHYRPTGEPDADYDTYKELL
>NZ_CP023694.1|WP_150478555.1|203324_204389_-|lipid-transfer-protein
MTSAPGDRQIAVVAFAQTDHRRTSEDLSEVEMLMPVLHEVLDRTGLKTADIDFTCSGSSDYLAGRAFSFTLALDGVGAWPPISESHVEMDGAWALYEAWTKLLTGDAGTALVYSYGKSSPGSVRDVLTRQLDPYYLAPLWPDSVALAALQAQALIDAGDTDEPALAAVAARNREAATENPHAQLKEPAPQGDYLVRPLRTGDCPPIGDGAAAVVLAAGDRARELCPRPAWIRGIDHRIEAHGLGVRDLTDSPSTRLAAERAGAFERPVDTAELHAPFTAQEIVLRKALRLDDGVVVNPSGGALAAHPIMAAGLIRIGEAAARIHRGESDRALAHATSGPCLQQNLVAVLEGEPR
>NZ_CP023694.1|WP_150478554.1|202161_203328_-|thiolase-domain-containing-protein
MSKEPVAVVGIGQTKHVAARRDVSIAGLVREAARRALDDAELTWADIDAVVIGKAPDFFEGVMMPELYLADALGAVGKPMLRVHTAGSVGGSTALVAANLVAARVHGTVLTLAFEKQSESNAMWGLSLPIPFQQPLLAGAGGFFAPHIRAYMRRSGAPETVGALVAYKDRRNALKNPYAHLHEHDITLDKVMASPMLWDPIRYSETCPSSDGACAMVLTDRAGAARAPRPPAWMLGGAMRSEPTLFAGKDFVSPQAGQDCAADVYRQAGITDPRREIDGAEIYVPFSWYEPMWLENLGFAGEGEGWKLTEAGVTELDGDLPVNMSGGVLSTNPIGASGMIRFAEAALQVRGQAGEHQVDGARRVLGHAYGGGSQFFSMWLVGAEPPDS
>NZ_CP023694.1|WP_010033039.1|201836_202079_-|DUF397-domain-containing-protein
MAETTTQQRPLTGWDKPELDLTNAQWQSSSRGRGDVQIAFVEGFIAMRNSARPESPSLIFTPAEWGAFVSGAREGEFDLT
>NZ_CP023694.1|WP_150478553.1|200750_201653_-|universal-stress-protein
MSTLPVIAAVDGSDHSMRALEWALDAARRRSAPLRVVHVRQYAHWAQPEVLAAAPPDPQDDPVLDRVRADLEELGGLPDTEYLGLEGAPGAVLPEQSASAQLLVLGSRGRGGFASLLLGSNGIAAARDAECPVVVVPRPGREDRGGGPAGPGSRVVVGLKVDGPDEATLEFAFAEAARRGARLQAVAAYPWPAQPWMTPGELPPPIVDQDVIEDETRILAEGFLTPYRERHPDVQVEPLPAAGDAAGHLVAASPGADLVVVGRHRRHLLAPARMLGSVTHAVLLHAASPVAVVPPAPPED
>NZ_CP023694.1|WP_167537250.1|200110_200740_-|hypothetical-protein
MDTGRPIIRPMREPISRDARLALDLALTVRHDGNGGVADDLTEPAGLTAWVRAHPEVLPDAGRFTADAAQLAAVRDLRAAVRALFARAVRPGEPSPADATRLLPLPEAVRRLNEAAARTPTVPVLDWPEGAGPDVRPQPVRRGDDLTAALAHAVITFLASPDRDRLRACHAPRCVRYFLKDHPRQEWCTPSCGNRARVARHHRRHRTTT
>NZ_CP023694.1|WP_150478551.1|199554_200052_-|hypothetical-protein
MSFLRRRSATPAGPDFDVLAMDPGDWPGNLGAGLLPAPDGTCQGVFLRYDLFGGRGPAMIIGNLPEGSPARDVPEGQVPFEVAQLLLALENDEEITVVSTEDMPVMQGDNLLIVRRVKLSESRISCVQFDRSDNVLVTIAAWDRPITDDLYALLKPLPAELFQQG
>NZ_CP023694.1|WP_150478550.1|198342_199482_+|phosphotransferase
MYTASSSVSAPPRSLHPRPTDSGPYLAPARPAAPVLGAGRARRGAVLGTQPLSGRLDLSGPQGAQLRTAIASVHRICPEFAPVQVLRRNGRAVLLVGTTGRSSAVAKCLLDHSPAWSERIRHEIAAYRSFVRHRPPVRVPRLIAADPDNCTLVIERMPGRVAALQRHPAEAPPRADIRAALGAICRLNAWRPPAGTFDAPLDYAARISRYHELGLLTDRDLGDLQKLLHGIAQAAGRQGMGQFCHGDALLSNILLSPAGPVLVDWEHAGWYLPGYDLATLWSVLGDAPVARRQISQIAQSAGPASRDAFLVNLMLVLTREIRTYETAVQRSMHDTTPAAPGTAHPGAAPSGEEQRLLLRRLHDDCQMARRAVRAAVGTR
>NZ_CP023694.1|WP_150478559.1|210487_211201_-|alpha/beta-fold-hydrolase
MDTEPRTVRANGITLAYRVWGPEDAPPVVLLHARGTDGADWAEIAPALAAGPRRVYAPDLRGHGRSDWPGGYAYEAMRDDVLAFLRALGIARADVVGHSLGGAVAYLLAQYSPRLVRRLVLEDVPAPFPLDPPRPSAERPDGDLPYDWAMVLATDEQRNAPDPLWWDHMGRLTMPTLLIGGGPTSLIPQEQIAAFAEVLPDARRVTIDAGHLVHETRPEDFLAAVGEFLSPADRTPS
>NZ_CP023694.1|WP_150478560.1|211263_212106_-|alpha/beta-fold-hydrolase
MPIFSAPDGTRLACHVRGAGEPLVVLPGGPMRASAYLGNLGGLDAHRQLVFLDLRGTGQSAAPEDPATYRCDRLVDDVDALRRHLGLERMDVLAHSAGGSLAMLYAARYPDRVARLALVTATPWALGLPATAEDRLAAARLRLSEPWFGDAFPAFEAWLSGTGDFDPVFLPFFYGRWDDTARAHADREEDETNDDAADRYGADGAYDPDATRTALARLTVPVLVLAGEVDGGPRPGLARRTAGVFPAAEFAVQPGAGHYPWLDDPEWFVRRVVRFLHERD
>NZ_CP023694.1|WP_150478561.1|212173_213700_-|AMP-binding-protein
MTTPGHGSTVDGILRRSARRTPARTAVEYGDRTWTYDELDTAVSRAASVLLGQGLSPGDRVGAYGHNSDAYLIAFLACARAGLVHVPVNQNLTGDDLAYIVGQSGSSLVLADPDLAGRLPDGVRSFPLRDADDSFLARLTEATPYDGPEPRTEDLVQLLYTSGTTALPKGAMMTHRALVHEYLSAITALDLSAGDRPVHALPLYHSAQMHVFLLPYLAVGATNIILDAPDGERLFDLVEAGRVDSLFAPPTVWIALSNRPDFATRDLSGLRKAYYGASIMPVPVLERLKERLPELAFYNCFGQSEIGPLATVLAPEEHKGRMDSCGRPVLFVDARVVDEDGKDVPDGTPGEIVYRSPQLCEGYWDKPEETAEAFRDGWFRSGDLAVRDAHGYYTIVDRVKDVINSGGVLVASRQVEDALYSHPQVAEAAVVGLPDERWIEAVTAVVVPRGEVTEAELIAHTREKLAPFKAPKRVVFVEGLPRNASGKILKRELRQSLGDEPGLAASDG
>NZ_CP023694.1|WP_150478562.1|213855_216294_+|acylase
MRSRLRRLVLGATALFTAASALPAAAASGQGRAEQHPSRDGLSAVIRYTEYGIPHILAKNYADLGFGTGWAQAADEVCTLADGFVTLRGERSRYFGAGAAAGGALSGARTNLASDLYFRGVRETRTVEKLLAEPAPVGPSREVRDMMRGWAAGYNAWLKQKKITDPGCAGASWVRPVTELDVAARGLAIASISGEGRFVDTITAAQPPTGAGTASGTPSSRPATRTPDAKAVAKAADELWGDPGMGSNAVAFRGDTTANGSGLLLGNPHYPWQGGRRFWQSQQTIPGELNVSGGSLLGTPAISIGFNAHVAWSHTVSTGIPANFHQLTLDPADPTTYLVDGEPERMKKRTVTVAVKDGAPVTRTQWWTRYGPVVTSLNSQVPLPWTDATAYALHDPNAANLRFADTSLGFSKARSTGDVLGSLARHQGLPWVNTIAADRAGHSLFTQSQVLPRITDELAQRCSTALGRTTYPASGIAILDGSRGDCALGSDPDAVAPGIFGPARMPTLKDAPYVENSNGTAWMTNADRPITGYERVFGTVGTELGLRTRGGIEDVAAMADRGHLTVRDLQRQQFANRVPAGDLTATDVARACAALPGGTATGSDGKAVDVSEACGVLAAWDRTMNAGSRGALLFDRFWRKLEQAVPAAEAWKVPFSAADPVRTPNTLNTDAPGFGVALADAVAELRAAGIALDAPLGAHQFVVRGGEHLPMPGGSGRLGVWNVLEPQWNAAGGGYTEVPFGSSHLQAVGWDGSRCPVARTLLTYSQSSNPESPHYADQTRLFSDEKWVTSRFCEKDILSSPKLKVVRVHERR
>NZ_CP023694.1|WP_150478563.1|216343_217609_-|DUF418-domain-containing-protein
MTIATEQGTLRRGGVRPGERALAPDLARGIMLLCIVLSNTAFHLWAARRGPSGWQPVDGSWLDHAVQFTMIMVLDLRIYPLFAFLFGYGMMQLYLRQTAAGTDGRDAAKILRRRSLWLIVIGLAHATLLMAGDIIGFYGVLSLVLGLAFLRRGERALTWWIWIGVALMALVTAGPVIAALLQGDLGTLGDADAEAGFKAYASDEENWLTAAGTRLETGLFVTFAAAPLTLVGGGYILFLLGFWAARRRILEEPGRHRTLLRITAVIGIATGWLGALPAALAHIGVLRVPDDMQSESGALTALRDITGNAAGLGYVAAVALFAHWWTTRGPRRGTTAVTAVASVGKRSLSCYLAHSLLFAPVLAAWGLGLGAHLGSTTMALFAFAVWLVTVAGAYALERAGRRGPAEAVLRRLMYGPRVDRG
>NZ_CP023694.1|WP_150478564.1|217721_219275_-|AMP-binding-protein
MTSSAPAGFWAQATADPDRAVLVAPDGEEWTAGRLHAAANRLVHGLRAAGLERGDTFAVVLPNGVQFLTAYLAASQAGFYLVPVNHHLVGPEIAWIVSDSGAKVLLAHERYGEAARHAADEAGLPATHRYAVGPVEGFRSYAELLDGQPESAPAERTLGWVMNYTSGTTGRPRGIRRPLPGKPPEEAFLGGFLGIFGIRPFDDNVHLVCSPLYHTAVLQFAGASLHIGHRLVLMDKWTPEEMLRLIDAHRCTHTHMVPTQFHRLLALPDEVKDRYDVSSMRHAIHGAAPCPDHVKRAMLDWWGPCVEEYYAASEGGGAFATAEDWLKKPGTVGKAWPISELAIFDDDGNRLPPGELGTVYMKMNTGGFSYHKDEAKTRKNRIGDFFTVGDLGHLDEDGYLFLRDRKIDLIISGGVNIYPAEIESALLAHPAVADAAVFGIPHDDWGEEVKAVVEPAPGHRPGRALAADLLDHCAHRLAGYKRPRSVDFITEMPRDPNGKLYKRRLREPYWEGRTRPV
>NZ_CP023694.1|WP_150478565.1|219271_220381_-|nitronate-monooxygenase
MQTELSQKLGVEHAVFGFTPFPAVAAAISRAGGFGVLGAVRYTAPDELKRDLDWIEAHVDGRPYGLDVVMPAKKVEGVTEADVEAMIPEAHRQFVRDTLAKHGVPELAEGEASGWRITGWMEQVARSQLDVAFDYPIRLLANALGSPPADVVARAHDQDVLVAALAGSARHARKHKDAGIDIVVAQGYEAGGHTGEIASMVLTPEVVEAVAPLPVLAAGGIGSGQQVAAALALGAQGVWLGSLWLTTTEADLHSPALTRKLLAAGSGDTVRSRALTGKPARQLRTEWTDAWEDPDGPGTLPMPLQGLLVAEAVSRIQKYEVDPLLGTPVGQIVGRMNSERSVQAVFDDLTRGFEQAVDRINRIAGRSGQ
>NZ_CP023694.1|WP_167537251.1|220506_222276_+|serine-hydrolase
MTEGTADRATTNGGLTRRRALVLGGALALAPLPAEAAPVRGRPTLRHGPAARAGLLPSHLRQLVTDAEAFLGPSPEHPWYAGAVLLAGRGGTVALHRPIGMAVRYRAYDEKTDTGVEFPAGEQIPMAEDTVFDLASVSKLFTSILAVQQMERGALELEGKVASYLPDFAGAGKQDITIRQLLTHTSGFRSWIPLYSAPTYEEKLQLLWNEAPVSAPGTAYLYSDLNLISLQLVLERITGRSLDVLLRDEITAPLGLRRTRYNPPASWRPKIAATEDARPPWSGLDRGLVWGEVHDENAFSLGGVAGHAGVFSDAWDLAVLGRTLLNGGVYGRARILKPESVELMFTDFNTAFPGDEHGLGFELYQHWYMGAMATPRSAGHTGFTGTSLVLDPTTDSFLVVLGNSVHPVRSWRSGSAPRVAAANHLARAVPVRPVSGRRAWFSGMAVSATATLTLPALDTSSGRVRLRCALWWDTEPGADMLVLEATADEGTTWQPVPFTTSRRGEGPREHPSGSVTGWSGRVWHRLTADLPAARTLALRWRYATDRRYVGRGAYVDGLRVDAADGVLFDEARPADAARVEAAGWSPSAD
>NZ_CP023694.1|WP_150478567.1|222286_222478_-|DUF2795-domain-containing-protein
MADLSPTDLQKALKGMDYPTDKQHLVERARSNHADDKVVSTLDGLKEDRFDGPNEVQKAVFNQ
>NZ_CP023694.1|WP_150478568.1|222574_224188_-|FAD-dependent-oxidoreductase
MADLDHPVLRRTMTAPLGPRAHRTYDAVIVGGGHNGLVAAAYLARAGRSVLVLERLDHTGGAAVSTRPFAGVDARLSRYSYLVSLLPKKIVRDLGLDFRVRTRTISSYTPAERDGRPTGLLVGGGERRTREAFARLTGSDREYRAWQEFYGMTGRVAQRIFPTLTEPLPTREELRRRLDDEEAWRMLFEEPLGVAVEEHFADDLVRGVVLTDALIGTFADAHDPSLKQNRCFLYHVIGGGTGDWDVPVGGMGALTDALADAARAAGAVLATGHEALRITTDGQEAEVTYRTADGEGTVAARHVLVNASPQALAELTGDTPPAPAEGAQLKVNMLLTRLPRLRDNAVDPHEAFAGTFHIAEGYEQLAAAHAQAAAGDLPAAPPSEIYCHSLTDPSILGPDLADRGYQTLTLFGLHTPARLFERDNDAVREELLKSTLAQLDAHLAEPLTDCLATDADGRPCIEARTPLDLERDLGLPGGNIFHRELSWPHAQDGTGRWGVATGHANVLLCGAGAVRGGGVSGVPGHNAAMAVLEIGND

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Crispr_ID: NZ_CP023694_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_2

1484870-1484967

Orphan

Consensus_repeat	Method
CCAATTTCACCAATCTCGTCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_2

>merge|NZ_CP023694|2|1484870-1484967|CRISPRCasFinder
CCAATTTCACCAATCTCGTCACCCCGACTCCCAATCTCGTCACCCAATCTCGTCACACAAAACAGCAGGTCAGATCCAATATCACCAATCTCGTCACC

>NZ_CP023694|2|2|1484870-1484967|CRISPRCasFinder
CCAATTTCACCAATCTCGTCACC	CCGACTCCCAATCTCGTCACCCAATCTCGTCACACAAAACAGCAGGTCAGAT
CCAATATCACCAATCTCGTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150479500.1\|1493470_1493659_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479489.1\|1480765_1481962_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP023694.1\|WP_150479493.1\|1483596_1484772_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|316042
NZ_CP023694.1\|WP_150479491.1\|1482693_1482903_+\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_167537288.1\|1485987_1486137_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_167537286.1\|1481954_1482563_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP023694.1\|WP_150479498.1\|1487913_1491243_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381605
NZ_CP023694.1\|WP_150479495.1\|1485663_1485900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479486.1\|1473901_1474915_+\|DUF21-domain-containing-protein	unknown	unknown	gnl\|CDD\|224173
NZ_CP023694.1\|WP_150479496.1\|1486133_1486400_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479492.1\|1482899_1483124_+\|DNA-binding-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479488.1\|1479286_1480453_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP023694.1\|WP_150479494.1\|1485063_1485318_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479499.1\|1493078_1493363_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479497.1\|1486692_1487901_+\|phage-major-capsid-protein	unknown	unknown	gnl\|CDD\|377449
NZ_CP023694.1\|WP_150485254.1\|1483249_1483600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479487.1\|1477760_1479110_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223238
NZ_CP023694.1\|WP_150485253.1\|1476657_1477653_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|180426
NZ_CP023694.1\|WP_150479501.1\|1494025_1494352_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_167537287.1\|1485314_1485482_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150479489.1\|1480765_1481962_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	6.40532e-22
NZ_CP023694.1\|WP_150479493.1\|1483596_1484772_+\|AAA-family-ATPase	gnl\|CDD\|316042	pfam13481, AAA_25, AAA domain. This AAA domain is found in a wide variety of presumed DNA repair proteins.	4.26602e-19
NZ_CP023694.1\|WP_150479488.1\|1479286_1480453_+\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.37049e-16
NZ_CP023694.1\|WP_150479487.1\|1477760_1479110_-\|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223238	COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].	4.16857e-145
NZ_CP023694.1\|WP_150479497.1\|1486692_1487901_+\|phage-major-capsid-protein	gnl\|CDD\|377449	pfam05065, Phage_capsid, Phage capsid family. Family of bacteriophage hypothetical proteins and capsid proteins.	2.09513e-29
NZ_CP023694.1\|WP_167537286.1\|1481954_1482563_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.52135e-08
NZ_CP023694.1\|WP_150479498.1\|1487913_1491243_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381605	cd13402, LT_TF-like, lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	9.45827e-38
NZ_CP023694.1\|WP_150485253.1\|1476657_1477653_-\|phosphotransferase	gnl\|CDD\|180426	PRK06148, PRK06148, hypothetical protein; Provisional.	5.44139e-55
NZ_CP023694.1\|WP_150479486.1\|1473901_1474915_+\|DUF21-domain-containing-protein	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.13982e-80

>NZ_CP023694.1|WP_150479493.1|1483596_1484772_+|AAA-family-ATPase
MSEPDMWPTGWEGGEPHLTVVQGDTPVTQKRGLLLRPASGIKIRPVRWLWDTTPEGATPTSHGRIPMHSLVLAAGGPGLGKSQYAVWLTAQITRGLLPGELYGKPRPVIYAAAEDSWAYTIAPRLIAADADMDLVFHVTVQDDEQPHARLSLPVDTSLLGKEAEAHSVALLVMDPLLSYIDKTINDYRAAEVRQALEPLVDAADRHRFTILGLAHFTKAGGSDPLARVAGSGAFGQLIRCLIAFARHEDEQGDDRLVMSLEKNNLGRLGLPSHEYTIQPVTIATPEGPSYVSRFVLGPEVTTSVRDVMRAETEPDIGREETNEASVWLRDYLTDLGGEADAKEIKQHAKAAGFSSSAMDRAKRRLKLTSTNTGFGKEKRAIWSLPTSLDTR
>NZ_CP023694.1|WP_150485254.1|1483249_1483600_+|hypothetical-protein
MWAEAKVYYLASVFPKYGSPAWIALPPDDPRRLASALHAAEMWRKYGDEDNLLAWFRDVSRPRPPFAEGRSRAELDALAKPKRPHQLRATPGWPPIRVPGKPGRYLTYRDTHQEAA
>NZ_CP023694.1|WP_150479492.1|1482899_1483124_+|DNA-binding-protein
MSKSQPTLADIRKWPATVSVTDAARAIGCSRSHLYERVKRGDSPVKTIGVGTRHVVITADLIRLLSGETGGAAA
>NZ_CP023694.1|WP_150479491.1|1482693_1482903_+|DNA-binding-protein
MKEEFLSPKQVATEYPVLGTTSALAERRWRGEGPAYIKTGKGRGGRVFYRRSAIEEFLTECTVTPGRAA
>NZ_CP023694.1|WP_167537286.1|1481954_1482563_-|helix-turn-helix-domain-containing-protein
MADQQRGRRAIEVGPTGRTVAANIARLRERRGLTTRQLSGALERAGRNIPASGITRMEKGERVVTADELAALAVAFGVSPTALLLPLTDRADDRVEVTGGGEVDALAAWEWGIGRLPLTVTPGREKTELVEHRLFGAPQWLSEHVGYSVRMAVSRPAVPTEEGRKAMDEIRKRYKEQTGEDIDPDVLLSRLLGVDVKDGEDG
>NZ_CP023694.1|WP_150479489.1|1480765_1481962_-|tyrosine-type-recombinase/integrase
MAEPKRIVLSSGKVRYRLMVDAGRDENNKRIQITVTRNTAKECREERDRILHQRAAGTLIVPNKITLAEWLDEWLEYKRRDVEETTIRSYRLALVHVYDQLGHIRLQELSEDHVREFVDELVARGRRAGGERGTRLAISTVEGILIRLRGALQRAVVRKLVSVNVASEVRPSLADKKTDKRERDRPKPWTVAEVQTFIRGIQGDRLFAPLLLSLMGLRPAEVCGQRWKDLDLVNGLLSITLTRTMIGNVRVLEKDTKTAAGERSLPLPRGPWDALLAFQEVQLAEQQRAGEAYTFTGFVVVDELGRPLNTRQLREYAYRTMRRLGLRQVRLYDARHAVLKALALSGVPDVILAAWAGHTNAAFTKRKYVQIEAEDMRGAAAALDAFHGVDQKALSEKL
>NZ_CP023694.1|WP_150479488.1|1479286_1480453_+|ROK-family-protein
MTNPTSRDYNKASVLDVVLSHAPLTRNKLIELTGLSKATVSRAVEELRADGFVVDGGVDEITGRGRRSTYLDLPGTTGHVAGVSFGARTTGVLVTDLRGREIQHVTVPTADHHEVQDAARWLVDLIGQAARSAQGPLRQVVAAVPGRVRGGTEIFGPAQSMKIFAGTGLQRAVEALVDAPVLLDSDANASLLAILTDDATIRNAALFSVSTILNFAGCTDHELARGSTPTFGDIGVLSSGVGDENLDDLLSTRGLLRFARQRGLDLERVEDLWLQPHAEAPHAEVLRAFTTAIVTAVSVVAVTLDPESVYFVGRLRPLVDVVLPQVRERLDQSLPAVPEIRTVPHQIGLSTAQGAVYACLTIAQERLRDAVLGARHRNRLTERSAPAF
>NZ_CP023694.1|WP_150479487.1|1477760_1479110_-|aminotransferase-class-III-fold-pyridoxal-phosphate-dependent-enzyme
MTSTLSRAIAHYPNRFDPGVLSELPEHLQETIQRRNKVLGPGYTLIYREPVEFVAGHGAHLIDRHGNDYLDAYNNVPCVGHAHPHVAEAVARQMAVVNTNTRYVQEALVDYAERLLSTFPEELSKLSIACSGSEANDLAVRVARFHTGGEGIIVTRWAYHGITREVASFSPTLGAGSPLGPNVRLIDAPDPRLVAPGSTLAEHMRQQVRGAIDDLERHGYRLAALITDCAHSSDGIFTDPPGYMQAVVEEVHAAGGVYIADEVQSGFARLGESMWGFSRHGVVPDIVTMGKPMGNGLPISGVVFRPEVSEEFGRNVRYFNTFGGSSIPVAAGAAVLDVFEKENVQQRVLENGNALRAGLREITENSPYVAEVRGAGLYVGVEIVKDRETLEPDRALTEDVINDMRDRRILISGTGTSANTLKIRPPLAFDSADVTRFLDTFAEVAKNRL
>NZ_CP023694.1|WP_150485253.1|1476657_1477653_-|phosphotransferase
MLVSIVLEEHYRLDGRLERLATEKDDTFRLSTDSGDYLVKVSPPDEAEAVVALQTAAMRYLETTAPHLPVQRVKLTAGGDDHVTIRLNDGRPRVLRVFDFVEGQVLADANPDAGRLAKAGEMLGLIDVALRPFTHPADRRGLAWDLRHFHQLTELVEHTPSPEHRQLARSVFRLFGDSVVPRLSDLETQVIHGDFSPYNIVVDPKSDHFVTGVIDFGDTVRSAVIFDPAVPMANLLGRTPDQPWRDACAFAAGYQRQRPVQAPELPLLPVAALARLTLRALITNWRAEHAPERRAYLLGHAKDDWINVERSLAVSLDDVVAHLGEARHGHS
>NZ_CP023694.1|WP_150479486.1|1473901_1474915_+|DUF21-domain-containing-protein
MTVVQLLIGLATLVVNAFFVGAEFALISVRRSQIEPYADRGDRRAKSVLWGLEHVSALMAAAQLGITLCTLVLGVVAEPAIAHLLEPVFHAMGVPEGAGHAVSFVIALALATYLHMLLGEMVPKNIALAEPVRSALTLGPPLVTLSRALRPVIFTVNAFANTLLKLLRVEAREEVAASYSDAEIAQIVKDSSEAGLIDDRAQERLHDALELGRRPVRDVVLPLERVVYARVGVTPDGLERLSAESGFSRFPVVDEGRRIVGYLHVKDALEAAGRDVPFRLRDMRPIARVREHTPLDDVLTAMRGSRTHLAAVLGADGRLAGLVTMEDVLRELFGQRV
>NZ_CP023694.1|WP_150479494.1|1485063_1485318_+|hypothetical-protein
MGQPRYRITAMAPVSGQWSVRINTQGVYAHATVVAWASIAYQTVLPGDQQTETQTVFVYKGRPMTEAEFRDVYGDDSEFHVEPV
>NZ_CP023694.1|WP_167537287.1|1485314_1485482_+|hypothetical-protein
MTSHVDEQIAARIAAARLKRSKRRQQRAELDEARAYGLHARHTAKMRRWAKEDGE
>NZ_CP023694.1|WP_150479495.1|1485663_1485900_+|hypothetical-protein
MTPQQKVTALALAALRNDPVGLAVLLGDLDDDEVRSAAGIALLNLCNGFRAILTDDAMREVIAGMQALAASEAGGEGS
>NZ_CP023694.1|WP_167537288.1|1485987_1486137_+|hypothetical-protein
MDEEDEPQGHNPVVRVPAFQVDGSSLRPAVVDAPLDVATQWDERIWGHA
>NZ_CP023694.1|WP_150479496.1|1486133_1486400_+|hypothetical-protein
MRVRTLDGTEAAGTQLVLAVLEHAETAPVGPWTAQLGMAAVVDGSGAVWFVGTDDVGRLVSLPCECEHVELTTYKDGAEISRTVGVNG
>NZ_CP023694.1|WP_150479497.1|1486692_1487901_+|phage-major-capsid-protein
MQKDITQLGQELKHHLEAAQAIATKADDEKRDFTPDEMTEVKSHMDAAKGLKADMEAAKATQTMRTALQELGDGIAGTGRETKSDLHPRVKASGGTDWGETVVKAVAGPDGYKGILANGTVAVNVPLNPEPVRMDVPVLTLRQLMPNVQNTSGRFAYLRQNTRTNNAAVVAQGAKKPTSVYQLQRIDDRVRTIAHLSEPIAKQDLDDVGMLRQFIDQEMRLGLDLALEDEILNGDGTGEHMTGIGNVSGSQAQAFDTNLLVTTRKAVTKLERYGYLAGAAFVMTPEDWESIELLADNEARFYYGGPQNIVNQGARRLWGAPVVVTDAATTGVAHLADFRQMRLQVRQDGVLDWSENVYDPNALGAGSGASDFERNMLRFRFEGRFGLEILRPSSIVEIDLTA
>NZ_CP023694.1|WP_150479498.1|1487913_1491243_+|transglycosylase-SLT-domain-containing-protein
MATGGTLVGRGYVSIRPEFEGDWSREVSSQTSRAGAAGGSAFSKAFGGVLGAGLKTITRGFGVQLAAAMAPAAGAAGVLATATLAAASAQTALQIGLSGVSDAVSEAFNPTSPEKFNEAMAKLSPNARSFVTELRSMKPAIDGLRLAVQDRLFAGLDKTMATAAKTTLPIFRNSLVNSAGALNLMGQNLANTAIGLGKSGALGTALSHANEGLYNLSRAPSVLLQGLFQVGAAAGPSFAKLTAAGGSALDTLSERMTGAFSSGAMQDFIETGVDVLMDLAGILSDAFASVGNILKAASDAGGQALAIVGSLFEELRRITAMPEVQAALRTIFASIAQIAGAIAPVIGSVLQAVMPLIAAIAPVVAQLATALGPVLQQLATTLGKALAPIIDALLPVLSLVGEAVVQIMQAITPLLEPIGKLLGAMIDALMPVLKPIIDIVVQLVDVLVGPLGQIINQLIPYIGLLGQVMGQVFAGLTPLIAPLVDIVGYLAQVFADVYVQLIQTVMDAIVPMIPAIMQLVSVLVTLAMQVIQALMPSLEDLIGAGLQLLDAVLPLVPMFAELAAMMLGLVTKALAVILPPLISFAGWLISGLAGAISAVIGWVSSLIKWLTKNLGPAFRWLNEKVVQPVWRAIQGAIRYAWENVIRPLFSGIKLGIQGVGAVFRWLRDKVVTPVWNGIKGSISFVWEKGIRPAFDALKKAIGKVGGAFGTAKDAIKKAWDKIRDATKAPINFVLRTVWNGGVVKAWKKISDWVPGLPKLKELPLLAQGGTVPARPGVFNRPTAIVGEGRSQYPEFVIPTDPRYRGRALSLWEAAGGQLMADGGILGDLWGGIKNVGSKIGGAISSAADFLTDPGKALEKLLGNLTKPLDAIKGSAFGRLALALPKSIFKGLKDLVTGGGDAVAGVGPGAGSGVQRWRGVVRQALGLVGQPLSYDNITLRRMNQESGGNPTIVNKWDSNWEAGYPSVGLMQVIRPTFQRHAGRFRNKGPFSYGVSVDPLANVYASMRYALAAYGSLPRAYNRAGGYDDGGWLGPGQIGVNNLRQPEAVLTPTQWRTMQSAAAAGATGGLQAGDALRLVVDDHEFTAYIDVRADGRVQRGNQQLVQVLNAS
>NZ_CP023694.1|WP_150479499.1|1493078_1493363_-|hypothetical-protein
MLRLLRKTPKPQPTPVDPAAVAAGLRTFAADLEAGDTFALDCIGPRGELPHTPEGWAAYPTWSIRRVRIAHFGKTGPGEIPTHIEDELWERLAG
>NZ_CP023694.1|WP_150479500.1|1493470_1493659_-|hypothetical-protein
MKPRTAAGRARRSGIVSIARSMVRDRGHAYPAEVIAAAAAAGLKPSQADVKAALTRAGMYRR
>NZ_CP023694.1|WP_150479501.1|1494025_1494352_-|hypothetical-protein
MSQRVWIRTGSSLTPYTTVDPKPIPAADLDEHGHLWSYDGGVSDLDAPYTCVLCCEPQWRAYGDPCKEAGTLDAWNAQRSAWIEKNRLDKAPPANAGWSDSWALPVPA

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Crispr_ID: NZ_CP023694_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_3

2027312-2027421

Orphan

Consensus_repeat	Method
GGTTGTTCGCGCAGTTCCCCGCGCCCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_3

>merge|NZ_CP023694|3|2027312-2027421|CRISPRCasFinder
GGTTGTTCGCGCAGTTCCCCGCGCCCCTGGGGCCTCAGCGCCGTAGGGGGTGTGGTGGTTGGGCGGGTGCGGGTGAGTGGGGGTTGTTCGCGCAGTTCCCCGCGCCCCTG

>NZ_CP023694|3|3|2027312-2027421|CRISPRCasFinder
GGTTGTTCGCGCAGTTCCCCGCGCCCCTG	GGGCCTCAGCGCCGTAGGGGGTGTGGTGGTTGGGCGGGTGCGGGTGAGTGGG
GGTTGTTCGCGCAGTTCCCCGCGCCCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150485289.1\|2026244_2027276_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176194
NZ_CP023694.1\|WP_150479933.1\|2024048_2025446_+\|gluconate-transporter	unknown	unknown	gnl\|CDD\|308194
NZ_CP023694.1\|WP_150479935.1\|2027429_2028044_-\|formate-dehydrogenase	unknown	unknown	gnl\|CDD\|225419
NZ_CP023694.1\|WP_150479937.1\|2028864_2030400_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP023694.1\|WP_150479942.1\|2033629_2033974_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|376882
NZ_CP023694.1\|WP_150479926.1\|2014661_2014895_-\|DUF320-domain-containing-protein	unknown	unknown	gnl\|CDD\|367652
NZ_CP023694.1\|WP_167537309.1\|2022249_2022633_+\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|225557
NZ_CP023694.1\|WP_150479940.1\|2032681_2033218_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|185291
NZ_CP023694.1\|WP_150479941.1\|2033249_2033642_+\|DUF202-domain-containing-protein	unknown	unknown	gnl\|CDD\|225060
NZ_CP023694.1\|WP_150479944.1\|2035253_2036276_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|270703
NZ_CP023694.1\|WP_150479932.1\|2023478_2023997_+\|gluconokinase	unknown	unknown	gnl\|CDD\|225804
NZ_CP023694.1\|WP_150479934.1\|2025459_2026224_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|236040
NZ_CP023694.1\|WP_150479928.1\|2016966_2020833_+\|amino-acid-adenylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|274093
NZ_CP023694.1\|WP_150479927.1\|2015069_2016395_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|181163
NZ_CP023694.1\|WP_150479929.1\|2020901_2022245_+\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NZ_CP023694.1\|WP_150479938.1\|2030437_2031388_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479943.1\|2034110_2035055_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176191
NZ_CP023694.1\|WP_150479931.1\|2022639_2023341_-\|FCD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225097
NZ_CP023694.1\|WP_150479939.1\|2031754_2032654_+\|DMT-family-transporter	unknown	unknown	unknown
NZ_CP023694.1\|WP_150479936.1\|2028027_2028753_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239027

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150485289.1\|2026244_2027276_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176194	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.2849e-151
NZ_CP023694.1\|WP_150479933.1\|2024048_2025446_+\|gluconate-transporter	gnl\|CDD\|308194	pfam02447, GntP_permease, GntP family permease. This is a family of integral membrane permeases that are involved in gluconate uptake. E. coli contains several members of this family including GntU, a low affinity transporter, and GntT, a high affinity transporter.	3.82835e-136
NZ_CP023694.1\|WP_150479935.1\|2027429_2028044_-\|formate-dehydrogenase	gnl\|CDD\|225419	COG2864, FdnI, Cytochrome b subunit of formate dehydrogenase [Energy production and conversion].	6.10171e-20
NZ_CP023694.1\|WP_150479937.1\|2028864_2030400_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	3.44467e-24
NZ_CP023694.1\|WP_150479942.1\|2033629_2033974_+\|DUF202-domain-containing-protein	gnl\|CDD\|376882	pfam02656, DUF202, Domain of unknown function (DUF202). This family consists of hypothetical proteins some of which are putative membrane proteins. No functional information or experimental verification of function is known. This domain is around 100 amino acids long.	1.04425e-10
NZ_CP023694.1\|WP_150479926.1\|2014661_2014895_-\|DUF320-domain-containing-protein	gnl\|CDD\|367652	pfam03777, DUF320, Small secreted domain (DUF320). Small domain found in a family of secreted streptomyces proteins. It occurs singly or as a pair. Many of the domains have two cysteines that may form a disulphide bridge.	1.19953e-20
NZ_CP023694.1\|WP_167537309.1\|2022249_2022633_+\|YchJ-family-protein	gnl\|CDD\|225557	COG3012, COG3012, Uncharacterized protein conserved in bacteria [Function unknown].	4.67943e-44
NZ_CP023694.1\|WP_150479940.1\|2032681_2033218_+\|NUDIX-domain-containing-protein	gnl\|CDD\|185291	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional.	7.52061e-30
NZ_CP023694.1\|WP_150479941.1\|2033249_2033642_+\|DUF202-domain-containing-protein	gnl\|CDD\|225060	COG2149, COG2149, Predicted membrane protein [Function unknown].	7.42077e-25
NZ_CP023694.1\|WP_150479944.1\|2035253_2036276_+\|phosphotransferase	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.3737e-95
NZ_CP023694.1\|WP_150479932.1\|2023478_2023997_+\|gluconokinase	gnl\|CDD\|225804	COG3265, GntK, Gluconate kinase [Carbohydrate transport and metabolism].	3.9191e-78
NZ_CP023694.1\|WP_150479934.1\|2025459_2026224_+\|glucose-1-dehydrogenase	gnl\|CDD\|236040	PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional.	4.7844e-121
NZ_CP023694.1\|WP_150479928.1\|2016966_2020833_+\|amino-acid-adenylation-domain-containing-protein	gnl\|CDD\|274093	TIGR02353, NON-RIBOSOMAL_PEPTIDE_SYNTHETASE, non-ribosomal peptide synthetase terminal domain of unknown function. This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size.	0
NZ_CP023694.1\|WP_150479927.1\|2015069_2016395_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|181163	PRK07906, PRK07906, hypothetical protein; Provisional.	0
NZ_CP023694.1\|WP_150479929.1\|2020901_2022245_+\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	2.95303e-167
NZ_CP023694.1\|WP_150479931.1\|2022639_2023341_-\|FCD-domain-containing-protein	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.85348e-43
NZ_CP023694.1\|WP_150479943.1\|2034110_2035055_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	4.88565e-125
NZ_CP023694.1\|WP_150479936.1\|2028027_2028753_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239027	cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains. This molybdopterin cofactor (Moco) binding domain is found in a variety of oxidoreductases, main members of this family are nitrate reductase (NR) and sulfite oxidase (SO). Common features of all known members of this family are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	5.65385e-55

>NZ_CP023694.1|WP_150485289.1|2026244_2027276_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MLGCVIHGQGDLRVAELPVPEPGPGQALVAVRYGGVCGSDLHYWRHGGVGDFRLREPMVLGHEVVGTVVEYGAGASGPAPGAAVAVHPATPCGLCPECSDGRRNICRDTRYLGSAARFPHVQGGFAAHVAVPCEQVRALPEGLELRRAALAEPLSVALHAVRRAGDVAGRHVLVTGAGPIGCLVVAAAKAAGAVRVTVTDLLPEALEYARIAGAGTLVGADDPDDPGWPSEVDVAIEASGVAAGLDTCLRRVRRGGVVVQLGMLPAGRSAFAGNLVVSREIELRGAFRFDAEFDEALALLAVEPAFDGLVSAVVPVGDAESAFALAADRSRSCKVLLDFAPAP
>NZ_CP023694.1|WP_150479934.1|2025459_2026224_+|glucose-1-dehydrogenase
MTAHPLFDISGRTALVTGSSRGIGLALARGLAEAGCTVVLNGRDKDRLAEAAAGLPGDRVHTAAFDVTDGSSVASGVAEVEERVGPLDILVNNAGMQLRAPLLEFTDSDWHRILDTNLTSAFLVGREAARRMTERGHGKIINICSLQSEVARPGIAPYAATKGALKMLTKGMCADWGPSGVQVNGLGPGYIETELTRPLVEDEEFSAWVRRRTPAGRWGRTQDLVGGVLFLASPAADFVSGQVLYVDGGMTSVL
>NZ_CP023694.1|WP_150479933.1|2024048_2025446_+|gluconate-transporter
MTRLSVEMLAADAPEPITSAGHAQLGIAVLAGIAVIVLLITKSKLHAFLALTIGSLALGAIAGAPLDKVLTSFSTGLGTTVAGVGVLIALGAMLGKMLADSGGADQIVDTILAKAGGRSMPWAMVLIASVIGLPLFFEVGIVLLIPVVLMVAKRGNYSLMRIGIPALAGLSVMHGLVPPHPGPLVAIDAVKADLGVTLALGVLVAIPTVIIAGPLFSRYAARWVDVPAPDRMIPQRASEDLEKRPGFGATLFTVLLPVILMLAKALVDIVVDDPENPVQRVFDVIGAPMIALLASVLVGIFTLLRPAGFSKERISPLVEKSLAPIAGILLIVGAGGGFKQTLIDTGVGQMVLDISEDWSIPALLLAWLIAVAIRLATGSATVATVSAAGLVAPLAADMSTTHAALLVLAIGAGSLFFSHVNDAGFWMVKEYFGLSVGQNIKTWSVMETIISVVAGGIVLLLSLVI
>NZ_CP023694.1|WP_150479932.1|2023478_2023997_+|gluconokinase
MNTPHVVVVMGVAGTGKTTIGPLLAARLGVPYAEGDDFHPQANIAKMSAGTPLTDEDRRPWLDAIGEWAHGRAGLGGVVSCSALKRSYRDRLRAAAPGVVFVHLTGDRALIEDRMSHRQGHFMPTALLDSQFATLQPLQADEAGVDVDVSGGPEEITERAALALEDLPEPVQ
>NZ_CP023694.1|WP_150479931.1|2022639_2023341_-|FCD-domain-containing-protein
MTTPGRGLHGHVLDTLGPEITAGEYPPGSVLRTDELAQRFDVSRSVMREAVRVLESMHLVESRRRVGVTVRPTSEWNVYDPQVIRWRLAGKDRARQLRSLTVLRSAIEPVAAGLAARHATADQCAELTQCALGMVANSRGHKLEEYLVHDMAFHRVVLDASGNEMFARLGDVVAEVLAGRTHHDVMFEDPDPAAVTLHVQVAEAVRAGDAVRAEELTREITVGALQELDILAP
>NZ_CP023694.1|WP_167537309.1|2022249_2022633_+|YchJ-family-protein
MTGMTMRSCPCGLPEAYGDCCGRYHSGTTAAPTAEALMRSRYCAFVKGDVAYLLRTWHPRTRPGTLELDPGMRWTGLEILDTSDGSAFHSSGTVEFRASYRGGSLHERSRFERVDGAWVYVDGEFLP
>NZ_CP023694.1|WP_150479929.1|2020901_2022245_+|M1-family-metallopeptidase
MAVQQSVGQDPYFPGNGDRRYRVHRYELTLDYRPAPNRLSGTARINAIAGRGQLTEFQLNLADFRVGRVRVDGRAAHYTHRGGKLRVRPPKPLRTGAAFTVEVQWSGNPRPVSSPWGGLGWEELEDGALVASQPVGAPSWYPCNDRPADKASYQISVTTPSAYAVVAGGRLLTRTTKASTTTWVYEQAAPTSSYLVGLSIGKYQTVLLGDPGPGGVPQHGHIPAHLLPQFSRDFARQPAMMELFQELFGPYPFDEYAVVVTEEELDVPVEAQGLSLFGSNHVDGARGSERLVAHELAHQWFGNSVSIADWRQIWLNEGFAKYAEWLWSERSGGRGAQQLAAAAHRSLSALPQDLRLADPGRKSMFDDRLYQRGGLTLHAVRCALGDDAFFRMLRGWAGLHRGGAVTTAAFTAHVARFADEPLDELFDAWVYGTALPPLPSSGTGAAV
>NZ_CP023694.1|WP_150479928.1|2016966_2020833_+|amino-acid-adenylation-domain-containing-protein
MAALHDSPDLTVLDRELSTAPSDVARFSAGPAASPRTLVDIFEASVRSYPDEPALDDGHRLLTYRALAVEVERLRQRLAAVDVGLGDRVGVRVPSGTNDLYVAILAVLAAGAAYVPVDAEDPDERADLVFGEAGVRAVVGAGHELTVQGAAGHTAARPGAGHDAWIIFTSGSTGNPKGVAVSHRSAAAFVDAEAGLFLTEEPIGPGDRVMAGLSVAFDASCEEMWLAWRYGACLVPVPRSQVRSGADLGPWLVEQEITVVSTVPTLAALWEPETLNDVRLLIFGGEACPPELAQRLVTEGREVWNTYGPTEATVVACASLMSGAEPIRIGLPLDGWELAVVDEAGELVPMGGSGQLVIGGVGLARYLDDEKDAEKYAPLESLGWERAYRSGDLVKAEPEGLVFLGRADEQIKLGGRRIELGEVDAALQALPGVAGAAAAVRTARSGNQLLVGYVVIQEGWDQAAAVEKLRAELPAALVPLLAPVDELPTRTSGKVDRNALPWPLEGLVSGGPAEELYGTEAWLAEQWGEVLGIPVGSASDDFFAIGGSSLAAAQLTTKLRTRYPSAAVLDLYQHPTLRKLARHLEESAQGDGSRRVVEPVPARAGVLQLLLLLPLFTLLGLRWMVPLAALGNVLGAYSWLPSAPWWVVGAGALLFFSPPGRLAIAAGGARLLLRGVTPGRYARGGSVHLRLWTAERLAEFSGAASLTGSWLERYARALGARVGSDVDLHSLPPVTGMLKLGRGAAVESEVDLSGYWLDGDRLEIGPVKVGAGAVVGTRSMLFPGARVGKRAEVAPGSAVAGQVPTGQRWAGAPAVKLGKAKRNWPKERPEKGVFWRAMYGISGFGLSALPLLAGLAALLTVSLFVAPGAGLGEALRGAALALVPATLVFGAVYALLLLVAVRLLSLRLREGTHPTHSRVGWQAWTVTQLMDQSREMLFPLYAGLVTPVWLRLLGMRIGRGAEVSTVLALPSLTTVGDGAFLADDTLTAPYELGGGWMRIGRAQIGRRAFLGNSGMTAPGRSVPDGGLVGVLSATPKKAKKGSSYLGLPPVKLPRNAGGGDQSRTYEPPARLLWARGLVELCRIVPVLCSAALAALTVAALSSLGGWAWPLAGVVLLAVGAAGCALSVVAKWLLVGRHRSGEHPLWSSFVWRNELADTFVEVVAVPWLAGRVPGTPLMTLWLRGLGARIGRGVWVESYWLPETDLVTLGEGATVNRGCVLQTHLFHDRILRTDTVVLREGATLGPGGIVLPGSAVGARTTLGPASLVMAAESVPDDTRWLGNPIEAWRR
>NZ_CP023694.1|WP_150479927.1|2015069_2016395_-|M20/M25/M40-family-metallo-hydrolase
MSETDTARNVTGEDEVVDLCRELIQIDTSNYGDHSGPGERKAAEYVAEKLAEVGLEPQIFESHPGRASTVARIEGEDRSRPALLIHGHTDVVPANADDWTHHPFSGEIADGCVWGRGAVDMKDMDAMTLAVVRDRMRSGRKPPRDIVLAFLADEEAGGTYGARYLVDNHRDLFEGVTEAISEVGGFSFTVSEERRLYLIQTAEKGMHWMKLTVAGTAGHGSMIHRDNAITELSEAVARLGRHTFPVRVTKTTRAFLDELGDALGIELDPEDMESTLVRLGGIAKFIGATLSNTANPTQLGAGYKVNVIPGEATAHVDGRFLPGHEDEFLADLDRILGPKVRREDIHADKAVETTFDGALVEAMQSSLLAEDPTAKAIPYMLSGGTDAKSFDDLGIRGFGFAPLKLPPELDFAGMFHGVDERVPVEGLKFGARVLDRFIGAS
>NZ_CP023694.1|WP_150479926.1|2014661_2014895_-|DUF320-domain-containing-protein
MIKKVVAAAAATGGLVLASAGLAVADSGAQGAAVHSPGVLSGNVVQVPVHVPVNVCGNTVSVIGLLNPAFGNTCVNK
>NZ_CP023694.1|WP_150479935.1|2027429_2028044_-|formate-dehydrogenase
MSPRPDTAVAVRRFSRAERWVHRTTAALMGVCVLTAACLYVPQLAELVGRRALVVTLHKWTGLALPVPVLAGLASRALRTDLGHLNRFGPHDRTWLRAALHRDKRHGSRPAGKFNAGQKLYASWIAGATLVMLGTGLMMWFTHLTPLLWRTSATFVHDWLALTIGIVLAGHIGMALADPESRRGMRTGSVSREWADQQHPLWRQ
>NZ_CP023694.1|WP_150479936.1|2028027_2028753_-|molybdopterin-dependent-oxidoreductase
MNDGPPGQRGTPVGRRVFLGTLGLGALGVVAAPRLQRGLEGFLGGAADKDPTGLAGLLPNGGGFRYYSVASSVPRKNADSYRLTIDGLVDHPTTYTLADLKALPQTRLVRDVQCVTGWRVPDTPFGGVRLSRLLDTARVRPTARAIRFTCFDGTYTESLTLAQARRADVLVALRMQDKDLGHSHGGPVRLYVAPMYFYKSAKWLSGITVTDEVRPGYWEERGYDVDAWVGRSNGRDDEPTT
>NZ_CP023694.1|WP_150479937.1|2028864_2030400_-|APC-family-permease
MTTDSSSTSTSAAGGISTFKGQERALRADRLGTGGLLLSVLAATAPLMVVAGVMPTTFAVMGIVGQPLLFVVLGVVLILFSIGYAEMSRHVHNAGAFYAYISRGLGGTAGAGAALVALVAYNALQIGIYGIFGFEVSGLLATYAEVEIAWWIPALVAALAVGLLGWLKIDVNARVLGVLLVIEVLLVVIFDVAALADPGKEGLSLHAFNPDTLTGAGVGTALCFCIAAFLGFEQAPVYAEETSRPHVLVPRVMFLAVGGVAVFFALSSWALTVATGPAAIVGTAQKQSAGLLFFLTESRLGGTFTDVLHVLFVTGMFAALLSFHNVVARYAFAMGREGLLPAAFGRTSGTSGAPGTGSLLQTVVAVVVVAAFAIADDKPAGDPTAPVLQLFTWFGNIGALGVIVLMAAASLSVVVFFVRRGAAGAQAWRLVTSALAGLALLVIAGYTVKDFEVLVGAGPDSSLSWILPGIIGLALAAGLVLGLVLRARAPEKHARIGLGNEAFQLDKAASS
>NZ_CP023694.1|WP_150479938.1|2030437_2031388_-|hypothetical-protein
MPPPPPPLGRGRRRASQAFDEALDDADLVAARAALAQGRWQNARSLLVHTADDWDRRGHRVTVLAREPYCAAWAREWLLAEPESADAAVLLALAQVRRALHGKGKPVRAREACATAAARTPADPTPWLGLLLLECAVGTDQDVVRTFEQVRARYADHHHAHHLMVARLAGRRTEAGPDPLHEVYDFAGWAAEQAPADSPLAILPVIAHAERYRALAAAGHEPADPAASGHWTGRRARQVMKAAFDWWLEWELEGHPRRLIDLNFLAHAKFCEGRGAEAAALFHRIGRHATPAPWSYPDRDPHTAFAAARAAALGTA
>NZ_CP023694.1|WP_150479939.1|2031754_2032654_+|DMT-family-transporter
MSVLVLVLAVSAACCLGFGFVLQQNAAQRAPLNDFLSFRLLIDLVKVPRWLGGIGLMVAGTALGAAALGQGELSLVEPLLATNLLFALALSRRQTRQPLGRQGWAGLLLLAGGVTTFIVAGEPHGGAATADPMRQWLIIGAMIGVALLLTAHAKRSRLGSGPVLLALAAGLLYGVQDALTRVSGEKFAEGGFAGLLTGWQPYAVLALGVTGLLLVQSAFETASLRKSLPALTAAQPIAGIICGVGFLGDRLRTDAVALSWEAGGLLAVVAGIMLLGLHPAMPTGTVERARVGRLQPQPQ
>NZ_CP023694.1|WP_150479940.1|2032681_2033218_+|NUDIX-domain-containing-protein
MSAGGEGVSAADEILDIVDENDRVTGQSPRGEAYARGLRHRCVFVQARDAAGRIFVHRRTPTKLVFPSLYDMFVGGVVGAGETYDTAALREAEEELGVTGLPLPRYLFKFLYDNGAGQTWWSAVYEVRCDLPVQPQAEEVAWHDFLPEDEVRRRLGDWEWVPDGLAAYERLRAFRSRG
>NZ_CP023694.1|WP_150479941.1|2033249_2033642_+|DUF202-domain-containing-protein
MIEFVRNVRLWFAPAQVRKDGDTPDYRFSLANERTFLAWLRTALALIGGGFAVDQFLPDLRWGWRVGLALALLAAGVLCSLRAVNHWVRCERAMRRGEDLPVSRFPAVLSLVVAIVALAMVVVVLVGWEG
>NZ_CP023694.1|WP_150479942.1|2033629_2033974_+|DUF202-domain-containing-protein
MGGVNAPAARRQDPDRDPGLQPERTRLAWRRTTLSATASTVLAVKTALHGGASAPGLVACALCCVLWLGFLSIAHRRIRALSATATPAAFEPRRATAAVLCTMALAVCGAALVL
>NZ_CP023694.1|WP_150479943.1|2034110_2035055_-|zinc-binding-dehydrogenase
MKAISYSRYGGPEVLAFGEVRDPKVGPDSVLVKVRAASVNPVDWKAREGYLEGLLEAAFPVVPGWDVSGVVVRPGVAVSEFDVGDEVIGYVREDFLSRGTFAEYVAAPLRTLARKPRNLSFEEAAGLPLVGLTAYQVLVKVLEVKRGETVLVHAAAGGVGSIAVQLAAHLGARVIGTASEPNHDFVRGLGGEPVVYGEGLGERVRGLAPEGVDAVFDTVGGDALKVSANLLAPEGRLVSIADVGVVTYGGRYYFVRPDPEDLQRLSDLAEQGVVRVHVSETFPLERAADAYRLNEEGRTRGKIVVTVDWDPEDM
>NZ_CP023694.1|WP_150479944.1|2035253_2036276_+|phosphotransferase
MSPDHPPGLDLDRLRGLLDRERPGLVSGALSGRLIEGGRSNLTYAVSDGTSRWVVRRPPLGHVLATAHDMKREHRVISALHPTAVPVPRPVLLCEDEEVLGSPFYVMEFAEGTPYRTADQLAPLGPERTRGAVLNLVDALVELHAVDPGEVGLADFGRPEGFLDRQLRRWGKQLDASRNRELAGIDELHATLGRRLPASPAPAVVHGDYRLDNVLIGEDDRIKAILDWEMSTLGDPLTDLGLLAMYSLPLDAPDSPVSTTAEAPGHPDPAELIERYAARSGRDVSAVSWYTAFAWFKLAVILEGIHYRYTLGQTVGRGFDRIGDLVPVFIEHGLTTLQEG

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Crispr_ID: NZ_CP023694_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_4

2263464-2263578

Orphan

Consensus_repeat	Method
CATCGGGGCGCGGGACTTCACGCCGGTGCGGTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_4

>merge|NZ_CP023694|4|2263464-2263578|CRISPRCasFinder
CATCGGGGCGCGGGACTTCACGCCGGTGCGGTGAACGACCCCCCGGCCGGGGGTCCGGGGGTTGGCCCCCGGAGAACACAGCATCGGGGCGCGGGACTTCACGCCGGTGCGGTGA

>NZ_CP023694|4|4|2263464-2263578|CRISPRCasFinder
CATCGGGGCGCGGGACTTCACGCCGGTGCGGTGA	ACGACCCCCCGGCCGGGGGTCCGGGGGTTGGCCCCCGGAGAACACAG
CATCGGGGCGCGGGACTTCACGCCGGTGCGGTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150480116.1\|2270891_2272178_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP023694.1\|WP_150480114.1\|2269326_2269797_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP023694.1\|WP_150480109.1\|2259444_2259972_+\|DUF664-domain-containing-protein	unknown	unknown	gnl\|CDD\|368218
NZ_CP023694.1\|WP_150480107.1\|2257005_2257851_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270342
NZ_CP023694.1\|WP_150480115.1\|2269887_2270895_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480104.1\|2254271_2255363_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_CP023694.1\|WP_010037854.1\|2268549_2269323_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP023694.1\|WP_150480111.1\|2263707_2264796_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP023694.1\|WP_059422330.1\|2260310_2260817_+\|diaminobutyrate-acetyltransferase	unknown	unknown	gnl\|CDD\|131459
NZ_CP023694.1\|WP_150480113.1\|2266887_2268417_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143447
NZ_CP023694.1\|WP_150480112.1\|2266186_2266795_-\|DUF1349-domain-containing-protein	unknown	unknown	gnl\|CDD\|377771
NZ_CP023694.1\|WP_059422332.1\|2262183_2262582_+\|ectoine-synthase	unknown	unknown	gnl\|CDD\|183953
NZ_CP023694.1\|WP_150480106.1\|2256172_2257009_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_CP023694.1\|WP_150480108.1\|2258059_2259169_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223153
NZ_CP023694.1\|WP_059422331.1\|2260869_2262141_+\|diaminobutyrate--2-oxoglutarate-transaminase	unknown	unknown	gnl\|CDD\|236437
NZ_CP023694.1\|WP_150485299.1\|2264855_2265569_-\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_CP023694.1\|WP_150480103.1\|2252877_2253933_+\|threonine-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|236128
NZ_CP023694.1\|WP_150480117.1\|2272174_2272837_+\|response-regulator	unknown	unknown	gnl\|CDD\|225107
NZ_CP023694.1\|WP_150480105.1\|2255384_2256176_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP023694.1\|WP_150485300.1\|2265645_2266110_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150480116.1\|2270891_2272178_+\|histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.56238e-30
NZ_CP023694.1\|WP_150480114.1\|2269326_2269797_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.67511e-23
NZ_CP023694.1\|WP_150480109.1\|2259444_2259972_+\|DUF664-domain-containing-protein	gnl\|CDD\|368218	pfam04978, DUF664, Protein of unknown function (DUF664). This family is commonly found in Streptomyces coelicolor and is of unknown function. These proteins contain several conserved histidines at their N-terminus that may form a metal binding site.	1.57838e-45
NZ_CP023694.1\|WP_150480107.1\|2257005_2257851_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.98834e-74
NZ_CP023694.1\|WP_150480117.1\|2272174_2272837_+\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.06587e-65
NZ_CP023694.1\|WP_150480104.1\|2254271_2255363_-\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	2.05509e-64
NZ_CP023694.1\|WP_010037854.1\|2268549_2269323_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	9.21967e-64
NZ_CP023694.1\|WP_150480111.1\|2263707_2264796_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	5.39505e-42
NZ_CP023694.1\|WP_059422330.1\|2260310_2260817_+\|diaminobutyrate-acetyltransferase	gnl\|CDD\|131459	TIGR02406, L-24-diaminobutyric_acid_acetyltransferase, diaminobutyrate acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase. [Cellular processes, Adaptations to atypical conditions].	9.26951e-74
NZ_CP023694.1\|WP_150480113.1\|2266887_2268417_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143447	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.	0
NZ_CP023694.1\|WP_150480112.1\|2266186_2266795_-\|DUF1349-domain-containing-protein	gnl\|CDD\|377771	pfam07081, DUF1349, Protein of unknown function (DUF1349). This family consists of several hypothetical bacterial proteins but contains one sequence from Saccharomyces cerevisiae. Members of this family are typically around 200 residues in length. The function of this family is unknown.	4.58655e-55
NZ_CP023694.1\|WP_059422332.1\|2262183_2262582_+\|ectoine-synthase	gnl\|CDD\|183953	PRK13290, ectC, L-ectoine synthase; Reviewed.	1.56699e-80
NZ_CP023694.1\|WP_150480106.1\|2256172_2257009_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.89226e-59
NZ_CP023694.1\|WP_150480108.1\|2258059_2259169_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	8.40804e-80
NZ_CP023694.1\|WP_059422331.1\|2260869_2262141_+\|diaminobutyrate--2-oxoglutarate-transaminase	gnl\|CDD\|236437	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate transaminase.	0
NZ_CP023694.1\|WP_150485299.1\|2264855_2265569_-\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	3.31313e-82
NZ_CP023694.1\|WP_150480103.1\|2252877_2253933_+\|threonine-phosphate-decarboxylase	gnl\|CDD\|236128	PRK07908, PRK07908, threonine-phosphate decarboxylase.	7.1601e-159
NZ_CP023694.1\|WP_150480105.1\|2255384_2256176_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.61392e-153
NZ_CP023694.1\|WP_150485300.1\|2265645_2266110_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.94963e-14

>NZ_CP023694.1|WP_059422332.1|2262183_2262582_+|ectoine-synthase
MIVRSFKEIEGTDRHVKSASGTWESKRIVLAKEKVGFSLHETILYAGTETSMWYANHIEAVVCVEGEAELTDRETGKSYTITPGTMYLLDGHEKHTLRIKKDFRCLCVFNPPVTGREDHDENGVYPLLTEEV
>NZ_CP023694.1|WP_059422331.1|2260869_2262141_+|diaminobutyrate--2-oxoglutarate-transaminase
MTITQPDLSVFETVESEVRSYCRGWPTVFDRAVGSRMYDEDGHEYLDFFAGAGSLNYGHNNPVLKRALIDYLERDGVTHGLDMSTTAKRTFLEAFQNLLLRPRDLPYKVMFPGPTGTNAVEAALKLARKVKGRESIVSFTNAFHGMSLGSLAVTGNAFKRAGAGIPLVHGTPMPFDNYFDGTVEDFLWFERLLEDQGSGLNKPAAVIVETVQGEGGINVARPEWLRALSELCERQDMLLIVDDIQMGCGRTGAFFSFEEAGITPDIVTVSKSISGYGLPMSLCLFKPELDVWEPGEHNGTFRGNNPAFVTATAALEAYWADGSAMEKQTRKRGEQVEQALISITEENLADVKEYRGRGLVWGMEFHDKDRAGKIAKRAFELGLLIETSGPESEVVKLLPALTITPEELDEGLSTLARAVRETA
>NZ_CP023694.1|WP_059422330.1|2260310_2260817_+|diaminobutyrate-acetyltransferase
MTAVQADPQIDRPTVADGAALWRMAKDSKVLDLNSSYSYLLWCRDFAATSAVARDEHGEPMGFITGYVRPDSPHTLLVWQVAVDEAHRGRGLAATLLDGLVARTVAERGVTTVETTITPGNTASERLFTSFAERHGARLEREVLFDTAVFPDGPHDPEVLYRIGPLSH
>NZ_CP023694.1|WP_150480109.1|2259444_2259972_+|DUF664-domain-containing-protein
MTTNTPITLPDGRPVPHLTGDERAMLESWLDFHRATLALKCAGLDDAQVRTAAAEPSTLTLLGLVQHLAEVERNWFQRVAAGLDVPPVYEDGTGYTLDPSRGIDEALGIWRREIERGRELCAGLPLDHIGRVAEGPVPGMEVSMRWVLIHMIEEYARHNGHADLLRERIDGVTGA
>NZ_CP023694.1|WP_150480108.1|2258059_2259169_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTHPFLDLAPLGADRFAAIEDRVARLLSTEQDVVIMQGEALLPLEGAIRAAAGPGTTALNVITGPYGQTFGDWLRDCGATVVDLAVPFHTAVTAEQIRQAFAEHPEIDFVSLVHAEAATGNTNPVAEIGEVVRAHGALFYLDAVASIGAEPVLPDAWGVDLCVIGAQKAMGGPAGVSAVSVSERAWARMAANPRAPRRSYLSLLDWKERWIGGGRKALLHAPAQLEMLALEACVERIEAVGLDAVMARHASAAAATRAGAVGLGGGLEPYVYEARDAAPVATTLRAPSGVVASELVARALEADPAVPVAAGGGALAKEMIRVNHYGPDATPGAVRASLAALGAALSEAGLPVDVEGALRAAGEAWRETF
>NZ_CP023694.1|WP_150480107.1|2257005_2257851_-|transporter-substrate-binding-domain-containing-protein
MNTHPGHRARILAATTATAGLLLVAGCTSTDDGGSGSKTAAGGVEVVKAGKLTTCTHLPYPPFQSEIDGKVQGFDVALIDLVAKDLGVQQDILDTPFENFKTGAFLNSGECDLAAAGMTITEERKKNVDFSDPYFNATQAVLVDKKSGISSFAGLKGKKLGAQAQTTGEDYAKSKGLDPVSFESSDAVLNGLRTGQVQAVVIDYPVVQGWLKDKANADAFEVVDNLDTGEQYGFTVKKGNTKLRAAINKALEDAKADGTYKKLYEQWIGPYDESAASPAAS
>NZ_CP023694.1|WP_150480106.1|2256172_2257009_-|ABC-transporter-permease-subunit
MTDTATPEVQPKKKGLTRRQKRGISRGVQYAVFVAAVIVFAVSADWDRLQNQFAQADIAERMFPDVITLALKNTVLYTVTGFAVGLALGMVIALMRLSSVGPYRWLAGIYIEIFRGLPALLIFIFIGVAVPLAFPGTEIIGGTYGKVALALGLVAAAYMAETIRAGIQAVPKGQMEAARSLGFSPARAMISIIIPQAFRIILPPLTNELVLLFKDSSLVLFLGVTLEERELSKYGRDLASQTANSTPILVAGLCYLLVTIPLGFVVRRMEAKAQEAVK
>NZ_CP023694.1|WP_150480105.1|2255384_2256176_-|ATP-binding-cassette-domain-containing-protein
MSRPEIEVRALHKSFGANEVLRGIDLEIGRGEVVCVIGPSGSGKSTLLRCVNLLEEPTKGQVFVGGTELTDPDVDIDAARRRIGMVFQQFNLFPHLTVTENLTLPQRRVLRRDKASAAKVAAENLARVGLSEKAAAYPSSLSGGQQQRVAIARALAMGPEVMLFDEPTSALDPELVGDVLAVMRMLADEGMTMMVVTHEMTFAREVADRVVFMDGGVIVEDGTPEQVIGDPRHDRTRHFLSRLLDPAMAEVEEETPDQVGKAD
>NZ_CP023694.1|WP_150480104.1|2254271_2255363_-|amidohydrolase-family-protein
MSDRTVLHVKGRVLVGPEEVRDELWVVDGRISYDRPAGARDIRTVRGWALPGLVDAHCHVGLDRHGAVPRDVAEKQALTDRDAGTLLIRDAGSPSDTRWIDDRDDLPKIIRAGRHIARTRRYIRNYAWEIEPDDLVAYVAQEARRGDGWVKLVGDWIDRDLGDLSACWPRGAVEAAIAEAHRLGARVTAHCFSEDSLQDLVEAGIDCIEHATGLTEDLIPLFAERGVAIVPTLVNIATFPQLADGGEARFPRWSAHMRRLHERRYDTVRSAFDAGIPVFVGTDAGGGLAHGLAAAEVAELVTAGIPPVEALAAGTWTARTWLGRPGLDEGAPADLVVYDEDPRKDVGVLAAPRRVVLNGRVVG
>NZ_CP023694.1|WP_150480103.1|2252877_2253933_+|threonine-phosphate-decarboxylase
MSTDGGHDLRHHGDAEVRDDGGSLVDLAVNVRADTPPAWLREHIAASLGGLAAYPDGRAARAAVAARHGLPVERVLLTAGAAEAFVLLARALKVRRPVVVHPQFTEPEAALRDAGHTVDRVLLREEDGFRLDPAAVPEAADLVVIGNPTNPTSVLHPAKVIASLARPGRLLVVDEAFMDAVPGEREALADRVDVPGLVVLRSLTKTWGLAGLRIGYVLAAPETIEDLERAQPLWPVSTPALAAAQVCVGPRGVAEAAHAAHRVAADRAHLVTGLARFAPAGLRVVAPAEGPFVLIRLPHAATVRGRLRDLGYAVRRGDTFPGLDEEWLRLAVRDRRTVDGFLRALERALAG
>NZ_CP023694.1|WP_150480111.1|2263707_2264796_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MDGEIQGTQSGSMETFENLVRAEFAPKHTYLNTASNGLLPARTVTAVQQAVRMRAEGTPLGPLYEDVEAARACFARLAGVPAERVATGASVAEYGGLIAASLPAGAEVLTAEADFASLVNPFHARGDLKVRAVPLERLAESVRPGTALVAVSTAQSADGRLADLPAVREAARAHGARTYVDASQSAGWLPMEADADDFLAAVGFKWLLGPHGAAFFVTPQDFGGLTPLLAGWVAGEVPWESCYGPVEELAHSARRFDISPSLFTYAGLRASLELLEEIGVDVVHAHDVALADRFRVGLAELGHAPVPAPGSAIVSVPGLGHRQQELSRAGIQVSDRAGNLRAAFHLYNTPADVDRLLEVLAA
>NZ_CP023694.1|WP_150485299.1|2264855_2265569_-|DsbA-family-oxidoreductase
MRVEIWSDIACPWCYVGKARFEKALRDFPHRDDVEVVHRSFELDPGRAKDDIQPVITMLTGKYGMSRAQAEAGEDNLGAQAAAEGLDYRTRGRDHGSTFDMHRLLHFAKEQGRQEQLLDLLYRANFAEERSVFNDDERLVELAVSAGLDAEAVRAVLADAGAYADDVRADEREAAQLGASGVPFFVLDRTYGVSGAQPAEVFAQALTQAYGERSPLKLVDSGDADACGPDGCAVPQH
>NZ_CP023694.1|WP_150485300.1|2265645_2266110_-|GNAT-family-N-acetyltransferase
MIRTALPAEVADVVALHARARATYYPDGLPQDGTDWLAIWESALARPEGRVLCVVEAGRIVGLASFRTPEGAPADTVKLFQFHVDPDHWRGGIGTALHAACVEEWQADGRRTAVLDVHVDNLRAQGFYRRQGWVPEPAEPGDHHLTMRLSLAAE
>NZ_CP023694.1|WP_150480112.1|2266186_2266795_-|DUF1349-domain-containing-protein
MDLEIPELPFPLRSYGPEAHWSYEDGVLTGWAGARQDRFVPPTGEGLDPASDAPRLLGAPEGDFQLIARVTVGFGAAFDAGVLYVNVGERAWAKLCLEYSPDVPTVCTVVTRGHSDDANSFAVDGSSVWLRVSRTGRAFAFHASRDGERWTFVRLFTLGDEKETGAALIGFMTQSPMGEGCVVTYDRVEFRPHWPNDLRDGS
>NZ_CP023694.1|WP_150480113.1|2266887_2268417_-|aldehyde-dehydrogenase-family-protein
MAAAPVWSVDPRTGKQREQVAVEATAQEVDAAVRAAHEARGSLADRTVRAAFLRSAAEELQAAKDGLVETADAETALGPVRLTGELARTCYQLRAFADIVDEGAFLDVVINHPDDTATPPIPDLRRYKVPLGVVAVYSASNFPFAFSVAGGDTASALAAGCPVVVKAHPDHPALSEYVAKVLRRAAARHDIPEGVLGLVHGFEAGIELIKHPLVSAAGFTGSVRGGRALFDAAAARPVPIPFHGELGSLNPVVVTEAAAAERAEAIGAGLAGSMTLGVGQFCVKPGLVLAPAGAAGDALLKSLTDAVSDTDAGVLLDHRMRDNFVAGVAERAELPDVDSPVTPGAGGEHTVSAGFLTVPASRLAAEGEHDLLLEECFGPVTVVARYEDETEVKAVLSRLPGNLTATVQLSDEEAAGQGRGAELLQELTPLAGRVLVNGWPTGVAVAPAQHHGGPYPATTSTSTSVGGTAIERWLRPVVYQNAPEALLPAELRDENPLGLPRRFNGQLER
>NZ_CP023694.1|WP_010037854.1|2268549_2269323_+|IclR-family-transcriptional-regulator
MSAGETGGGAQVKSAVRTVELLEYFAGRPGMHSLAAVQEAVGYPKSSLYMLLRTLVELGWVETDATGTRYGIGVRALLVGTSYIDGDEVVAAARPTLDRLSDDTTETIHLARLDGTNVVYLATRQSQHYLRPFTRVGRRLPAHSTSLGKALLSTYSDEQVRKMLPETLPALTENTITDREKLIEELHQVREQGFAVDREENTLGLRCFGVAIPYRTPARDAISCSVPVARLTPAHEQLVKDALFDARDRLTLATRRL
>NZ_CP023694.1|WP_150480114.1|2269326_2269797_+|GNAT-family-N-acetyltransferase
MNVELRQVHDSDLPVFFRQMNDPEALHMAAFTPGEPADRDAFDAHWAKIRSSDAVVRTVLADGDVVGSAAVYGVPGEREVTYWVDRAYWGKGIATAALRALVTEVPERPLYARAASDNAGSLRVLEKCGFRVVATASGYANARGAEIEETVLLLEG
>NZ_CP023694.1|WP_150480115.1|2269887_2270895_+|hypothetical-protein
MTQSLAPAPVPGPAVRLSGPRRILRAVAVLSCVPYLGLKAAWIAGSQVGIPEGSGLLDDRVGMAVINGLSVLLDSAVIVLALVLTRPWGLRVPAWLLAFPVWVATGLLAPIMAGFPAQLVVRAFGGGSVSDQGHEPFLHEWVFTVVYTGFILQGLALGGLFVLYARDRWGYLWRGRVWELPVGVVGPAHRALAAVAAVLALLPLTLHVLWACGVTAGLSEGRAADRGGDFHVLEAVHAAFLVAAVAGGFLLAFRRGRALPAAVPLGLAWVGSGAVACWGGWLTLASLGGVEDIADRPTPLMNLAYAGQMLVGFLVAAIGVYYFAERSARAARRTA
>NZ_CP023694.1|WP_150480116.1|2270891_2272178_+|histidine-kinase
MRQAARSLFGRRARLRWVHLILGGALAMPYVLVGSVIIGPATGSTNVFGSFPLQLASFGVGLPLAAVTSVFPLTRPLEAAAARWLCGVDADRLAFGPARTRGEKGRTASWFTLHLGFGGIIAGMSLAVPPFATVLILLPVFAGLGGTRLGLPEVFDHAWALALAPVAGAAMLVALAGCAAGSGALLARWAPALLGPSPEGRLAAAEARAADLAVRNRLARELHDSVGHALSAVTLQASAARRVLDSDPEFVREALAAIEDTTRRTVGELDAVLGVLREGGAPGTAPAPTLAADLDGLLRRTRAGGQRVTATVDADPESLPPLLSREGYRIVQEGLSNALKHAGDRVAVDVRIAAADGWLEITVENPVTGPATVTGPATVTGPASSRPGGGHGLRGIADRVRLLGGTMTAGPAGETWRLHVRLPMKGTA
>NZ_CP023694.1|WP_150480117.1|2272174_2272837_+|response-regulator
MTRPTPIRVVLADDERMVRTALRAILSAEPDLEVVGEAATGAEAVSVVRDLRPDVVLMDVRMPEIDGIRATEQILATLDEPPRIVVVTTFENDSYVYDALRAGAAGFLLKRADADALVQTVRLVARSDSLLFPAAVRTLATEHARAHPAPPAWVAKLTGREREVLRHMAEGLTNAEIARRMEVGPATVKSHVAAVLAKTGTRDRTQAVIAAYEAGFLNAG

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Crispr_ID: NZ_CP023694_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_5

2347742-2347853

Orphan

Consensus_repeat	Method
CCGCCGTCGGTGGCACTTCCGCGCTCCTTCCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_5

>merge|NZ_CP023694|5|2347742-2347853|CRISPRCasFinder
CCGCCGTCGGTGGCACTTCCGCGCTCCTTCCCCACGACGCCCCCGCCATCGGGGTCACTCCCGCAGCCCGACAGCCGCTCCGCCGTCGGTGGCACTTCCGCGCTCCGTCCCC

>NZ_CP023694|5|5|2347742-2347853|CRISPRCasFinder
CCGCCGTCGGTGGCACTTCCGCGCTCCTTCCCC	ACGACGCCCCCGCCATCGGGGTCACTCCCGCAGCCCGACAGCCGCT
CCGCCGTCGGTGGCACTTCCGCGCTCCGTCCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150480171.1\|2343134_2343530_-\|DUF3618-domain-containing-protein	unknown	unknown	gnl\|CDD\|378834
NZ_CP023694.1\|WP_150480180.1\|2350627_2351884_-\|SufS-family-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP023694.1\|WP_150480176.1\|2346609_2347599_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	unknown	unknown	gnl\|CDD\|274635
NZ_CP023694.1\|WP_150480183.1\|2354208_2355630_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NZ_CP023694.1\|WP_150480179.1\|2348916_2349756_+\|alpha-L-arabinofuranosidase	unknown	unknown	gnl\|CDD\|377497
NZ_CP023694.1\|WP_059419772.1\|2350141_2350612_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918
NZ_CP023694.1\|WP_167537321.1\|2345207_2346092_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP023694.1\|WP_150480177.1\|2347875_2348424_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225767
NZ_CP023694.1\|WP_150480178.1\|2348423_2348744_-\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP023694.1\|WP_150480173.1\|2344164_2344866_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480170.1\|2342109_2342796_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367760
NZ_CP023694.1\|WP_150480182.1\|2352966_2354151_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP023694.1\|WP_150480172.1\|2343526_2343946_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377816
NZ_CP023694.1\|WP_150480169.1\|2340221_2342051_+\|endonuclease/exonuclease/phosphatase	unknown	unknown	gnl\|CDD\|225249
NZ_CP023694.1\|WP_150480168.1\|2338496_2339915_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_167537320.1\|2344862_2345012_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_086846035.1\|2352652_2352970_-\|non-heme-iron-oxygenase-ferredoxin-subunit	unknown	unknown	gnl\|CDD\|239604
NZ_CP023694.1\|WP_031143572.1\|2349812_2350145_-\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_CP023694.1\|WP_150480175.1\|2346165_2346396_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480181.1\|2351880_2352645_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150480171.1\|2343134_2343530_-\|DUF3618-domain-containing-protein	gnl\|CDD\|378834	pfam12277, DUF3618, Protein of unknown function (DUF3618). This domain family is found in bacteria, and is approximately 50 amino acids in length.	8.95487e-08
NZ_CP023694.1\|WP_150480180.1\|2350627_2351884_-\|SufS-family-cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP023694.1\|WP_150480176.1\|2346609_2347599_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase	gnl\|CDD\|274635	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. This model represents a clade of the enzyme specific to Actinobacteria. Alternate name: tetrahydrodipicolinate N-succinyltransferase.	1.84212e-179
NZ_CP023694.1\|WP_150480183.1\|2354208_2355630_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP023694.1\|WP_150480179.1\|2348916_2349756_+\|alpha-L-arabinofuranosidase	gnl\|CDD\|377497	pfam05270, AbfB, Alpha-L-arabinofuranosidase B (ABFB) domain. This family consists of several fungal alpha-L-arabinofuranosidase B proteins. L-Arabinose is a constituent of plant-cell-wall poly-saccharides. It is found in a polymeric form in L-arabinan, in which the backbone is formed by 1,5-a- linked l-arabinose residues that can be branched via 1,2-a- and 1,3-a-linked l-arabinofuranose side chains. AbfB hydrolyzes 1,5-a, 1,3-a and 1,2-a linkages in both oligosaccharides and polysaccharides, which contain terminal non-reducing l-arabinofuranoses in side chains.	2.76329e-54
NZ_CP023694.1\|WP_059419772.1\|2350141_2350612_-\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	1.41168e-60
NZ_CP023694.1\|WP_167537321.1\|2345207_2346092_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	1.00019e-123
NZ_CP023694.1\|WP_150480181.1\|2351880_2352645_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	6.0788e-143
NZ_CP023694.1\|WP_150480178.1\|2348423_2348744_-\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.98155e-28
NZ_CP023694.1\|WP_031143572.1\|2349812_2350145_-\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	1.13845e-31
NZ_CP023694.1\|WP_150480170.1\|2342109_2342796_-\|hypothetical-protein	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	0.000253351
NZ_CP023694.1\|WP_150480182.1\|2352966_2354151_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	7.51382e-88
NZ_CP023694.1\|WP_150480172.1\|2343526_2343946_-\|phage-holin-family-protein	gnl\|CDD\|377816	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III. Phage_holin_3_6 is a family of small hydrophobic proteins with two or three transmembrane domains of the Hol-X family. Holin proteins are produced by double-stranded DNA bacteriophages that use an endolysin-holin strategy to achieve lysis of their hosts. The endolysins are peptidoglycan-degrading enzymes that are usually accumulated in the cytosol until access to the cell wall substrate is provided by the holin membrane lesion.	7.12752e-26
NZ_CP023694.1\|WP_150480169.1\|2340221_2342051_+\|endonuclease/exonuclease/phosphatase	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	2.79549e-57
NZ_CP023694.1\|WP_150480177.1\|2347875_2348424_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|225767	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown].	8.25372e-28
NZ_CP023694.1\|WP_086846035.1\|2352652_2352970_-\|non-heme-iron-oxygenase-ferredoxin-subunit	gnl\|CDD\|239604	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO). The RO family comprise a large class of aromatic ring-hydroxylating dioxygenases found predominantly in microorganisms. These enzymes enable microorganisms to tolerate and even exclusively utilize aromatic compounds for growth. ROs consist of two or three components: reductase, oxygenase, and ferredoxin (in some cases) components. The ferredoxin component contains either a plant-type or Rieske-type [2Fe-2S] cluster. The Rieske ferredoxin component in this family carries an electron from the RO reductase component to the terminal RO oxygenase component. BPDO degrades biphenyls and polychlorinated biphenyls. BPDO ferredoxin (BphF) has structural features consistent with a minimal and perhaps archetypical Rieske protein in that the insertions that give other Rieske proteins unique structural features are missing. CARDO catalyzes dihydroxylation at the C1 and C9a positions of carbazole. Rieske ferredoxins are found as subunits of membrane oxidase complexes, cis-dihydrodiol-forming aromatic dioxygenases, bacterial assimilatory nitrite reductases, and arsenite oxidase. Rieske ferredoxins are also found as soluble electron carriers in bacterial dioxygenase and monooxygenase complexes.	4.10642e-48

>NZ_CP023694.1|WP_150480176.1|2346609_2347599_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-succinyltransferase
MTDTTAPRTTGAVAAGLATVAADGTVLDTWFPAPELAAEPGPSGTERLSAEQAAELLGGGATAAIGPDARRGVEVVAVRTVIASLDEKPIDAHDVYLRLHLLSHRLVKPHGQSMEGIFGFLANVAWTSLGPVAVDDLEKVRLNARAEGLHLQVTSVDKFPRMTDYVAPKGVRIADADRVRLGAHLAEGTTVMHEGFVNFNAGTLGTSMVEGRISAGVVIGDGSDIGGGASTMGTLSGGGNVIISIGERCLIGAEAGVGIALGDECVVEAGLYVTAGTRVTMPDGQIVKARELSGASNILFRRNSVTGTVEARPNNAVWGGLNEILHSHN
>NZ_CP023694.1|WP_150480175.1|2346165_2346396_-|hypothetical-protein
MRNERGRAVARCLAGAVTALVVCWLPAGAAHADETNTDSHNGHRVGLVNVNVGQVDDPAEDVLEHTLLFGDGYAWN
>NZ_CP023694.1|WP_167537321.1|2345207_2346092_+|4-hydroxy-tetrahydrodipicolinate-synthase
MTPLFGRALCAMITPFTTSGALDLDGAQRHAAHLVAQGCDGLVLSGTTGESPTTTDAEKSALIAAVREAVGDQASIVAGIGTSDTRHTVDLAREAEKAGADGLLVVAPYYSRPPQDAIEAHFREIADASELPLMLYDIPFRTGVRVEPETILRLSAHPRIVAVKDCSHDFLAAQKVLARTDLAYYAGSDEHNLALYAVGGAGYVSTVSNVIPDRLRAVLDAFDAGDTAQAARLQQQATPLIEALMSAGLPGTVTTKALLTALGLPAGPVRAPLRPAPDKTTGELLSLHKVLTTT
>NZ_CP023694.1|WP_167537320.1|2344862_2345012_-|hypothetical-protein
MKLGKALATGIAEERPQARDEEIELPELQGLHGLRDVEEPALDEVPVAR
>NZ_CP023694.1|WP_150480173.1|2344164_2344866_-|hypothetical-protein
MRLRLPTERPTEPPTGYKIAHPVLSQDGTRAGFTGVSLGGALPYEVVAEAACVYGLRHRAPHRRCDCGFHCVHDRRAAEALLCTAEHRAAVLLEVSVLGVYIRFERGFRYARQRVRVMTLGACACGAGAAALGEAGWGRPGWRALAPCCGECLRGRPSLSPAGFARLAGDGLRVVAGGGSAPAGPAAAQGVGVPELAAEAALLQARLDVFQAQLAWLGEGGERGGRGGGGAAG
>NZ_CP023694.1|WP_150480172.1|2343526_2343946_-|phage-holin-family-protein
MTGTIDHRAVHDERHSVGELVSQASEQLSRLVRQEVALAKEELAEKGRRAGRGGGLLGAAGAVAYAGLLALAGTGVAALSLVLPVWAAALIVTGVLFVIAAVLAAAGRSQLRRATPPTPEEALGSVRADVEEIRERAHR
>NZ_CP023694.1|WP_150480171.1|2343134_2343530_-|DUF3618-domain-containing-protein
MTDATGGAKGPDELRQQIQRTRSELGNTVEELAGKADVKGRARARAADLRDKAGAMTVQLRSSAAQAGHTVHDKATHAGPRPVRDVVQAGMRHPKPVLVAGAAAGAAVVAVEVVRRRQQVTRGHRWQRWYR
>NZ_CP023694.1|WP_150480170.1|2342109_2342796_-|hypothetical-protein
MSPRTEQHPDLTDIRVGAPFFSTWRVGTPERQRQTVEAIGRTWERRPWPTGDLLGYHVYVGHDGSTLMHYSQWSSEQAYEAFVKTHRQERVDEIDTAVPGIERVGIGRYRRYGGLERAVGDVREPGVIVTVRVDFEEGAGERREEWVDLVLKALGADPEGNAGLISAHFHLSADGGHVLNYAEWESDQAYDEALAAPRTDTWERVRTYPGVKGSSGSRYRHALGLVPG
>NZ_CP023694.1|WP_150480169.1|2340221_2342051_+|endonuclease/exonuclease/phosphatase
MPSKSSARLAALTVAAVCSAASTIVLTTPAHADSVRIHDIQGNTRISPFAGKQVTDVTGIVTGIRTYGSSRGFWIQDPNPDADPATSEGVFVFTSSTPKGVAVGDSVTVSGTVSEYVPGGTASGNQSLTEITKPTTTVVSSGNRLPAATTVDARSVPAAYAPAGDAAANGSVNALPLKPAKYALDRYEALEGMTVRVTDTRVVGATDPYTELWVTVKPHENRSRNGGTVYGSYDAQNTGRLQIQSLGATADFPKANVGDTLTGTTAGPLDYNQFGGYTLVASELGTLKSADLKRETTRKQRSSELAVATYNVENLDPTDDTFAEHASAIVNNLKSPDIVSLEEIQDNNGATNDGTVAADQTMTKLIDAIVAAGGPAYDWRSIDPADKADGGEPGGNIRQAFLFNPERVSFTDRAGGDATTATGVTKIRGKAHLTLSPGRIAPADEAWKNSRKPLAGEFVFRGRTVFVIANHFNSKGGDQGLTSQYQPPARSSETQRHQQATLVNAFAKDILDTEKNADVVVLGDINDFEFSDTTRKLEGRGELWSAIKSLPRSERYSYVYQGNSQVLDQILISPSIRRDCDFEYDSVHVNAEFNDQISDHDPQVLRFRP
>NZ_CP023694.1|WP_150480168.1|2338496_2339915_-|hypothetical-protein
MSDSSPLPPVRLHPEAELARDALSTPLLSRAARLARWAGPETRVDAGGGLVDEQVPAAAEVLGLSGDDAAADASEAWRVAVDAGLVEIVDEEEGTVTAGEDLALLTGGSPQDVLAVWLAALETVLADASVPDLDGLVAEDGEVDLSALDWDPEAEAEFLDGVLGNLYLLTAGEDTPADAPVPLPALAASVIVPSDMGEPTNDVLEQVSEAMMRLDDQFRMLEPVGLVAYQPVDEALMAEADEEPAAPVDDTDVSRYGMVRLTPLGLYGLRARLLEAGFEAPAVGDLADKGADALLDGTAAFPPGAAQAETEQWLQRRESLAAARELLAAARGSDAGAPLRRLRCQQALSLVGASAEPALREVLDDAELGGLARVWLTEHGAVDVPAPSEAMVYWLTIDTVAAQLAAEGNSEELRALVEGLARQHGGFFEAVWRVEHPATADVLEAMGRLHPDKKVAKEARKAAFKARSQQGG
>NZ_CP023694.1|WP_150480177.1|2347875_2348424_-|TetR-family-transcriptional-regulator
MPRRYDPERRQRIIDAAIRVVGAKGIAGLSHRTAAAEADVPLGSTTYHFKTLDELLVAALRQANEGFAKIVAGRGALEDPHTDLAAELAAWMGEWLAGDRTGVELEYELYLAALRRPALRPVAAEWAEGLAELLSRRTDPVTARALVAVVDGVCLQVLLTGVPYDEAYAREVLGRVVAGARE
>NZ_CP023694.1|WP_150480178.1|2348423_2348744_-|multidrug-efflux-SMR-transporter
MGYLLLAAAITAEVGATTAMKYSDGFSRLGPSLLTLLGYLVSFALLAQTLKTVSVGTAYAIWAGVGTAAIATIGIVFLGEGMSVAKAAGIALIIIGVVVLNLGGAH
>NZ_CP023694.1|WP_150480179.1|2348916_2349756_+|alpha-L-arabinofuranosidase
MPKDKSRPPLDRPWESGWAPDTTRAPGTRRLWLAGALAVATVTACVTAVTVLENEPGEPAREAAEPTTLGSSAPGGLISFATPSKGAGETRGTDGGRPSPTPTPTTSAPTSADPSPEPQKKTPKPTPPHGTSKPPKPPASHGISIRSVNYPDRYWRVRDGYVRLDQIGSGPEQREDATFERVSGLADSSCSSFTTADGRYLRHRSFVLVEDTDDGSALFRKDATFCPRPSAASGAVMLESVNYPGRFLRHRNFQLRLEPYQHDGLYRADSAFRLVAGLD
>NZ_CP023694.1|WP_031143572.1|2349812_2350145_-|metal-sulfur-cluster-assembly-factor
MSETVEMKPASEEEVREALYDVVDPELGIDVVNLGLIYGIHIDEANIATLDMTLTSAACPLTDVIEDQAKSATDGLVNELRINWVWMPPWGPDKITDDGREQLRALGFNV
>NZ_CP023694.1|WP_059419772.1|2350141_2350612_-|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MKLDSMYQEVILDHYKNPHGRGLRDGDAEVHHVNPTCGDEITLRVKYDGTKIEDVSYEGQGCSISQASASVLNELLVGKDFSDARKIQETFLELMQSKGKLEPDDAMEEILEDAVAFAGVSKYPARVKCALLSWMAWKDATAQVLGGADAEKETTA
>NZ_CP023694.1|WP_150480180.1|2350627_2351884_-|SufS-family-cysteine-desulfurase
MTQLPGLLDTEALRKDFPILDRQVHDGKKLVYLDNAATSQKPRQVLDALNEYYERYNANVHRGVHVLAEEATALYEGARDKVAEFINAPSRNEVIFTKNASESLNLVANMLGWADEPYRVDSDTEIVITEMEHHSNIVPWQLLAQRTGAKLKWFGLTDDGRLDLSNIDEVINEKTKIVSFVLVSNILGTQNPVEAIVRRAQEVGALVCIDASQAAPHMPLDVQALQADFVAFTGHKMCGPTGIGVLWGRQELLEDLPPFLGGGEMIETVSMHSSTYAPAPHKFEAGTPPVAQAVGLGAAIDYLNSIGMDKILAHEHALTEYAVKRLLEVPDLRIIGPTTAEERGAAISFTLGDIHPHDVGQVLDEQGIAVRVGHHCARPVCLRYGIPATTRASFYLYSTPAEIDALVDGLEHVRNFFG
>NZ_CP023694.1|WP_150480181.1|2351880_2352645_-|Fe-S-cluster-assembly-ATPase-SufC
MATLEIRDLHVTVEVENGTKEILKGVDLTVKQGETHAIMGPNGSGKSTLAYSLAGHPKYTITGGTVTLDGEDVLEMSVDERARAGLFLAMQYPVEVPGVSVSNFLRTSATAIRGEAPKLRTWVKEVKEAMERLNIDPSFAERNVNEGFSGGEKKRHEILQLELLKPKIAVLDETDSGLDVDALRVVSEGVNRVRETGEVGTLLITHYTRILRYIKPDHVHVFSGGRIVESGGAELADKLEEEGYEAYTKGGASA
>NZ_CP023694.1|WP_086846035.1|2352652_2352970_-|non-heme-iron-oxygenase-ferredoxin-subunit
MTFVRACGLGELEEDTPKRVELDGTPVSIVQTEGEVFAIHDICSHANVSLAEGEVDDCHIECWLHGSRFDLRSGKPDALPATRPVPVYPVKIEGDDVLVSLTQES
>NZ_CP023694.1|WP_150480182.1|2352966_2354151_-|Fe-S-cluster-assembly-protein-SufD
MAEAQNIPVGSTTTGSIAVAAESTVATRMSAPPSFDVADFPVPHGREEEWRFTPLERLRGLHDGTAVANGNGVKVDVQAPEGVTVEAVGRDDARLGKAGTPVDRVAAQAYSAFEKASVVTVPKETVLTEPIRIAVHGEGGTAFGHQVIELGAFAEAVVVIDHTGDAVLAANVDYLLGDGAKLTVVCVQDWDDKAVHVAQHNALVGRDASFKSVVVTFGGDVVRLHPRVRYAGPGGEAELFGLYFTDRGQHQEHRLLVDHNVPHCKSNVVYKGALQGDDAHAVWIGDVLIEAAAEGTDTYEMNRNLVLTDGARVDSVPNLEIETGEIVGAGHASATGRFDDEQLFYLMARGIPEHEARRLVVRGFFAELVQQIGLPDIEERLIAKIEEELEAAVG
>NZ_CP023694.1|WP_150480183.1|2354208_2355630_-|Fe-S-cluster-assembly-protein-SufB
MTLPTETAHPELEGLGKYEYGWADSDKAGASAKRGINEDVVRDISAKKNEPEWMTKLRLKGLRLFEKKPMPNWGSDLSGIDFDNIKYFVRSTEKQAASWEDLPEDIKNTYDKLGIPEAEKNRLVAGVAAQYESEVVYHQIREDLEEQGVIFLDTDTALKEHPELFKEYFGTVIPVGDNKFASLNSAVWSGGSFIYVPPGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYKSDSLHSAVVEIIVKKNARCRYTTIQNWSNNVYNLVTKRAVAYEGATMEWVDGNIGSKVTMKYPAVYLMGEHAKGETLSIAFAGEGQHQDAGAKMVHMAPNTSSNIVSKSVARGGGRTSYRGLIEIGEGAAGSKSNVLCDALLVDTISRSDTYPYVDVREDDVSMGHEATVSKVSEDQLFYLMSRGLSEFEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGAVG

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Crispr_ID: NZ_CP023694_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_6

2493808-2494064

Orphan

Consensus_repeat	Method
CGTCCGCGTGGTTCNCNCCCGCACCC	CRT

5 spacers

The CRISPR arrays of NZ_CP023694_6

>merge|NZ_CP023694|6|2493808-2494064|CRT
CGTCCGCGTGGTTCCCGCCCGCACCCGGGCTCCACCCGCGAGACCGTCCGCGTGGTTCCCGCCCGCACCCAGGCTCCACCCGCGAGACCGTCCGCGTGATTCCCGCCCGCGCCCAGGCTCAGCCCACGCAGCCGCCCACGTCGTCCGCGTGGTTCCCGCCCGCACCCGGGCCCGACCCGCGAGACCGTCCGCGTGGTTCTCCACCGCACGCGGGGGCTTGGCCCACGCTGTCGTCCACGCGGTTCTCCCCCGCACCC

>NZ_CP023694|6|1|2493808-2494064|CRT
CGTCCGCGTGGTTCCCGCCCGCACCC	GGGCTCCACCCGCGAGAC
CGTCCGCGTGGTTCCCGCCCGCACCC	AGGCTCCACCCGCGAGAC
CGTCCGCGTGATTCCCGCCCGCGCCC	AGGCTCAGCCCACGCAGCCGCCCACGT
CGTCCGCGTGGTTCCCGCCCGCACCC	GGGCCCGACCCGCGAGAC
CGTCCGCGTGGTTCTCCACCGCACGC	GGGGGCTTGGCCCACGCTGT
CGTCCACGCGGTTCTCCCCCGCACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150480292.1\|2501223_2501985_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236116
NZ_CP023694.1\|WP_150480283.1\|2488943_2490749_+\|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236506
NZ_CP023694.1\|WP_150480291.1\|2500300_2501227_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236099
NZ_CP023694.1\|WP_150480293.1\|2502039_2502783_+\|enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181174
NZ_CP023694.1\|WP_150480280.1\|2485665_2486454_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480285.1\|2492234_2493641_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|99743
NZ_CP023694.1\|WP_150480289.1\|2498400_2498751_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|181719
NZ_CP023694.1\|WP_150480286.1\|2494151_2496647_-\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|274121
NZ_CP023694.1\|WP_150485311.1\|2498796_2499210_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP023694.1\|WP_059414413.1\|2483954_2484671_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP023694.1\|WP_150480284.1\|2490762_2492238_-\|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl\|CDD\|226017
NZ_CP023694.1\|WP_150480278.1\|2481274_2483086_+\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|236896
NZ_CP023694.1\|WP_150480290.1\|2499371_2500259_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480294.1\|2502783_2503620_+\|CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|224702
NZ_CP023694.1\|WP_150480282.1\|2488062_2488782_-\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|377344
NZ_CP023694.1\|WP_150480279.1\|2484736_2485393_-\|response-regulator	unknown	unknown	gnl\|CDD\|226230
NZ_CP023694.1\|WP_150480281.1\|2486461_2487898_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|180487
NZ_CP023694.1\|WP_150480288.1\|2497519_2498356_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023694.1\|WP_150480287.1\|2496714_2497266_-\|response-regulator	unknown	unknown	gnl\|CDD\|381085
NZ_CP023694.1\|WP_086848239.1\|2483091_2483958_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213186

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150480292.1\|2501223_2501985_-\|SDR-family-oxidoreductase	gnl\|CDD\|236116	PRK07856, PRK07856, SDR family oxidoreductase.	3.15307e-123
NZ_CP023694.1\|WP_150480283.1\|2488943_2490749_+\|twin-arginine-translocation-signal-domain-containing-protein	gnl\|CDD\|236506	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	1.06654e-132
NZ_CP023694.1\|WP_150480293.1\|2502039_2502783_+\|enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181174	PRK07938, PRK07938, enoyl-CoA hydratase family protein.	1.53951e-145
NZ_CP023694.1\|WP_150485311.1\|2498796_2499210_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.68165e-06
NZ_CP023694.1\|WP_150480285.1\|2492234_2493641_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|99743	cd06450, DOPA_deC_like, DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.	1.05534e-68
NZ_CP023694.1\|WP_150480289.1\|2498400_2498751_-\|chorismate-mutase	gnl\|CDD\|181719	PRK09239, PRK09239, chorismate mutase; Provisional.	5.51001e-58
NZ_CP023694.1\|WP_150480286.1\|2494151_2496647_-\|aminopeptidase-N	gnl\|CDD\|274121	TIGR02412, Aminopeptidase_N, aminopeptidase N, Streptomyces lividans type. This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).	0
NZ_CP023694.1\|WP_150480294.1\|2502783_2503620_+\|CoA-transferase-subunit-A	gnl\|CDD\|224702	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism].	5.82539e-61
NZ_CP023694.1\|WP_059414413.1\|2483954_2484671_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.66061e-127
NZ_CP023694.1\|WP_150480284.1\|2490762_2492238_-\|SidA/IucD/PvdA-family-monooxygenase	gnl\|CDD\|226017	COG3486, IucD, Lysine/ornithine N-monooxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	2.30468e-158
NZ_CP023694.1\|WP_150480278.1\|2481274_2483086_+\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	9.72366e-72
NZ_CP023694.1\|WP_150480291.1\|2500300_2501227_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|236099	PRK07791, PRK07791, short chain dehydrogenase; Provisional.	2.34964e-153
NZ_CP023694.1\|WP_150480282.1\|2488062_2488782_-\|SIMPL-domain-containing-protein	gnl\|CDD\|377344	pfam04402, SIMPL, Protein of unknown function (DUF541). Members of this family have so far been found in bacteria and mouse SwissProt or TrEMBL entries. However possible family members have also been identified in translated rat (Genbank:AW144450) and human (Genbank:AI478629) ESTs. A mouse family member has been named SIMPL (signalling molecule that associates with mouse pelle-like kinase). SIMPL appears to facilitate and/or regulate complex formation between IRAK/mPLK (IL-1 receptor-associated kinase) and IKK (inhibitor of kappa-B kinase) containing complexes, and thus regulate NF-kappa-B activity. Separate experiments demonstrate that a mouse family member (named LaXp180) binds the Listeria monocytogenes surface protein ActA, which is a virulence factor that induces actin polymerization. It may also bind stathmin, a protein involved in signal transduction and in the regulation of microtubule dynamics. In bacteria its function is unknown, but it is thought to be located in the periplasm or outer membrane.	1.20882e-30
NZ_CP023694.1\|WP_150480279.1\|2484736_2485393_-\|response-regulator	gnl\|CDD\|226230	COG3707, AmiR, Response regulator with putative antiterminator output domain [Signal transduction mechanisms].	6.08292e-62
NZ_CP023694.1\|WP_150480281.1\|2486461_2487898_-\|pyruvate-kinase	gnl\|CDD\|180487	PRK06247, PRK06247, pyruvate kinase; Provisional.	0
NZ_CP023694.1\|WP_150480288.1\|2497519_2498356_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.3084e-11
NZ_CP023694.1\|WP_150480287.1\|2496714_2497266_-\|response-regulator	gnl\|CDD\|381085	cd00156, REC, phosphoacceptor receiver (REC) domain of response regulators (RRs) and pseudo response regulators (PRRs). Two-component systems (TCSs) involving a sensor and a response regulator are used by bacteria to adapt to changing environments. Processes regulated by two-component systems in bacteria include sporulation, pathogenicity, virulence, chemotaxis, and membrane transport. Response regulators (RRs) share the common phosphoacceptor REC domain and different effector/output domains such as DNA, RNA, ligand-binding, protein-binding, or enzymatic domains. Response regulators regulate transcription, post-transcription or post-translation, or have functions such as methylesterases, adenylate or diguanylate cyclase, c-di-GMP-specific phosphodiesterases, histidine kinases, serine/threonine protein kinases, and protein phosphatases, depending on their output domains. The function of some output domains are still unknown. TCSs are found in all three domains of life - bacteria, archaea, and eukaryotes, however, the presence and abundance of particular RRs vary between the lineages. Archaea encode very few RRs with DNA-binding output domains; most are stand-alone REC domains. Among eukaryotes, TCSs are found primarily in protozoa, fungi, algae, and green plants. REC domains function as phosphorylation-mediated switches within RRs, but some also transfer phosphoryl groups in multistep phosphorelays.	4.61599e-25
NZ_CP023694.1\|WP_086848239.1\|2483091_2483958_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	2.16717e-124

>NZ_CP023694.1|WP_150480285.1|2492234_2493641_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MRTPPLASGPEGPHALRPLLHTVLRALDDGARARGGPLPAGGPDAVAARLREAVGEALPDQGDPQALSTLVRAFAEGAADPAHPLCAAHLHCPPLALAAAADLAASALNPSLDSWDQAPAASELETLVAAALAAEVYEAGGDAGTGPDSLITTGGTESNQLALLLAREAYGGSVRLVRGANAHHSLARAAWLLGLPEPVVVPAPAGTLHPAALDEALSRLPGPLLVAATAGTTDAGLIDPLPEIAARCAAHRARLHIDAAYGGGLLFSDRHRPRLAGLDAADTVTLDLHKLGWQPVAAGLLAVKDPRDLTALRHRADYLNAADDTEAGLPDLLGRSLRTTRRPDVLKLAVTLKTLGRSGLGALVDQVCARAAEFAALVEEHPGFELHARPVISTVLFRPAGAGDTTVAAVRRALLTDGRAVLGRARLDGRLWLKATLLNPATGPDDLAALLHLVTARQATLVEGHTPR
>NZ_CP023694.1|WP_150480284.1|2490762_2492238_-|SidA/IucD/PvdA-family-monooxygenase
MNPAPSPQPHEPNPAQATRPQHPCPHPHREPDAPRDLVGIGIGPFNLSLAALAHPLGELDTAFYEQRPAFGWHSGLLIEGATIQVPFLADLVSLADPTSPWTFLNYLRSRERLFPFYFAERLHIQRAEYDAYCRWVGESLPGLHFGHQVDAVRWNAERDLFEVDFTQLDADGEAEALGRTYTRNVVLGIGTEPYVPDPLKPLVEAPGVPVVHAADYLDHRADLLAAEHVTVVGIGQSGAEIFLDLLRGRPAGREKLHWLGRTEAFAPMEYSKLGLEHFTPDHTRYFHALPEPARDRLLAGQWQLHQGIDTATITAIHDELYRRTLHGGWPDAVLTPGVRVRTAGRVATTKVELHLEHGRQDSRSRLTTDAVVLATGYRERPLDRILAGLDPYMRRDSQDRPRIDEDYRLVLDPSVTGTVYVQNAETHTHGVGAPDLGLAAWRSAIILNSVTGREAYTLPRRTAFTTFGLTQRQQVPPPREAPALTPLVDRR
>NZ_CP023694.1|WP_150480283.1|2488943_2490749_+|twin-arginine-translocation-signal-domain-containing-protein
MPLNRRKFLEKSAVTGAGVALAGAVGAPGAQAAEAREDKRGAKRYAFTVLGTTDLHGNVFNWDYFTDKEFDDKDHNDIGLAKVSTLVNRVREEKGRRNTLLIDAGDTIQGTQLSYYYAKVDPITAEGGPVHPMAQAMNAMGYDAAALGNHEFNYGIPVLRKFEQQCRFPLLGANALDAKTLRPAFAPYSMHRLRTPCGRDVKVAVLGLTNPGIAIWDKANVQGKMTFPGLEEQAAKWVPKLRSMGADVVIVSAHSGSSGTSSYGDQLPYIENAAGLVAEQVPGIDAILVGHAHTEIPEYFVTNKKTGKRVVLSEPLKWGQRLTLFDFELVWDKGRWAVEKVGAQVLNSNTVQEDPKIVGLLSDEHEKVVAYVNQVIGTNAAEMTSAEAPYKDVPIIDLINHIQADTVKQALAGTEHAALPVLSQAACFSRSARIPAGEVTIRDVAGLYVFENTLEARLMTGAQMKAYLEFSAGYFVQTAPEAQVDPAKLTNANGTPDYNYDVVSGLSYEIDIAKPAGSRVTNVRFEGQPLADDAKFVFAVNNYRANGGGNFPHVAAAPLLWSNSDEIRNTMIAWVKAKGSIDPAGFAAVDWKLTRNGTPVF
>NZ_CP023694.1|WP_150480282.1|2488062_2488782_-|SIMPL-domain-containing-protein
MTAPTSDAPTPAVPYGTPDAPRIAVRGEARLEVDPEIARIGITVAARGRDRRSALDDLTHRNAGVLDLVKSYGDAVERLETGAFSITPELTKHGRGERVRTYHGTVHVTAELTDFTALGELTTRLADLELTRVDGPWWALRPDSPAHREARKKAVREAVQRAREYAEALGTTLSALVELADIGAENAPPAYPQAPGRARSAAYGAAAENAPAAPLDLEPQRQRVHAQINARFTMVPPRL
>NZ_CP023694.1|WP_150480281.1|2486461_2487898_-|pyruvate-kinase
MRRAKIVCTLGPATDSYDQIKALVDAGMDVARFNLSHGSHAEHEERYHRVRKAADETGRSVGILADLQGPKIRLGRFTEGPVLLERGDTFTITVEEGVEGDRNTCGTTYAGLAHDVTTGERILVDDGKVCLEVTDVDGPHVHTTVVEGGVISDHKGLNLPGVAVSVPALSKKDEDDLRWALRTGADVIALSFVRTGHDIQDVHRIMDEEGRRLPVIAKVEKPQAVENIDDIVAAFDGIMVARGDLGVEMPLEQVPIVQKRAIKLAKRNAKPVIVATQMLDSMIDNARPTRAEASDVANAVIDGTDAVMLSGETSVGKHAIETVRTMARIVEAAEEDILAKGLPPLTERNKPRTQGGAVARAAAEMGDFLGARFLVAFTQSGDTARRLSRYRSPIPLLAFTPDQATRSQLSLTWGVETFLGPQVGSTDAMVDQVDELLLRYGRCQKGDTVVITAGSPPGVSGSTNMVRVHHIGEDDSPK
>NZ_CP023694.1|WP_150480280.1|2485665_2486454_+|helix-turn-helix-domain-containing-protein
MNVHGTEVRQRALTLLRGGAKNADVARNLNVPLGTVGYWKHMDRAARGECPGRHDPMCPRCDGRELDEAAYAYLLGLYLGDGHISHYSEHRVPNLMITCTESWPGLMDDCERAMRAVFPENSVCRVRKTGCRNVKVYSKHLHCLFPQHGPGKKHERPIALEPWQQAIFDAHPWEFIRGLIHSDGCRITNWTTRMVAGERKRYEYPRYFFSNKSDDIRKLFTDALDTVGVEWSTLARGSDPFNISVARKASVALMDAHVGPKY
>NZ_CP023694.1|WP_150480279.1|2484736_2485393_-|response-regulator
MSAPESPQPVDVPDEDNSHVPPMTTRVVIAEDEALIRLDLKEMLEEEGYTVVGEAGDGEQAVELAREHRPDLVILDVKMPKLDGISAAEKIAEESIAPVLMLTAFSQRDLVERARDAGAMAYLVKPFSKTDVVPAIEMAVSRFTELKELEKEVADLTLRLETRKLVDRAKSILQTEYGLTEPAAFRWIQKTSMDRRMSMQQVAEAVIQDAEEKKAGKG
>NZ_CP023694.1|WP_059414413.1|2483954_2484671_+|ABC-transporter-ATP-binding-protein
MTALLEVEDLRVSYGKIEAVKGISFSVEAGQVVTLIGTNGAGKTTTLRTLSGLLKPTSGKILFDGKPLNGVPAHKIVALGLAHSPEGRHIFPRLTIAENLQLGAFLRKDKEGIEKDIQRAYDLFPILGERRKQAAGTLSGGEQQMLAMGRALMSQPKLLMLDEPSMGLSPIMMQKIMATISELKSQGTTILLVEQNAQAALSLADQGHVMEVGNVVLSGTGQDLLHDESVRKAYLGED
>NZ_CP023694.1|WP_086848239.1|2483091_2483958_+|ABC-transporter-ATP-binding-protein
MTTPVLEARGVTMRFGGLTAVRSVDFTVNAGEIVGLIGPNGAGKTTFFNCLTGLYVPTEGTVSYKGTVLPPKPHLVTQAGIARTFQNIRLFANMTVLENVLVGRHTRTKEGLWSALLRGPGFKKAERASEERAMELLEFIGLAHKRDHLARNLPYGEQRKLEIARAMASEPGLLLLDEPTAGMNPQETRATEELVFAIRDKGIAVLLIEHDMRFVFNLSDRVAVLVQGEKLVEGTSDVVQADERVIAAYLGEPFEGDPGEAEAAEVEAAEAAAEASPSTTSSTKGEAK
>NZ_CP023694.1|WP_150480278.1|2481274_2483086_+|branched-chain-amino-acid-ABC-transporter-permease
MTETTKTPAPDAMPTPPALRGLIPLPAAAARALLLAGGIATAASAFLAWTWTDEFPGDLTFNGYPGGLQWLTFTAGVLTALFALASYGVRGLGWLLPARNNAPLVLTALGGFTVTWFTVIAISVELGGVVNLEPGGWIAAIASLLPVLGAFALPQERTAADGTKETLKAYIAKPDRIPAPQATSGWVQRAVITAVTIIGLGVFTYGIDTEYGQLFVGYLFVVTFAMWAIHTAGLLDRFSALVAANRSFTLAMGFAAAIAFPFTQTDDHYANIGVNILIFGTVALGLNIVVGLAGLLDLGYVAFLGVGAYTAALVSGSEFSTISGVHLPFWASALAGAAASLVFGVLIGAPTLRLRGDYLAIVTLGFGEIFRIAVNNMDGDSGPDVTNGPNGIANIPDLNLLGFNFGQAHDIGGFTLGRFANYYLLMVLIMAIVVLVYTRAADSRIGRSWIAIREDETAATAMGINGFRVKLVAFALGAALAGLAGTVSAHVTYSVVPTPYQFAGSTPPNSAFLLAAVVLGGMGTVAGPLLGAALLYLLPEKLVFLQDKSLLAFGIALILLMRFRPEGIIANRRRQLEFHETGQLDVPKQTTLTDEPAVTKAGA
>NZ_CP023694.1|WP_150480286.1|2494151_2496647_-|aminopeptidase-N
MSVLTRDEAQTRAGLLDVHRYSIELDLTTGDEIFESRTVIRFSARADGDTFVEVRPAELCSVTLDGQPLDPETLDGNRLPLKNLTAGEHELRVHAHMRYSRTGEGMHRFTDPTDGETYVYTQLFLDDVQRVFAAFDQPDLKAVFELSVKAPQDWTVLANSVTEHTGDGLWQAAPTPLISTYLVAVAAGPWHSVRTEHRGLPFGLHCRRSLAPYLDADADELLDVTRACFDRYHEKFDEAYPFDSYDQAFVPEFNAGAMENPGLVTFRDEFVYRSAVTDTERQTRAMVVAHEMAHMWFGDLVTLKWWDDIWLNESFAEYMGYQTLTEATRFTDTWTDFGVNRKSWGYDADQRPSTHPVAPEAVDDTASALLNFDGISYAKGASALRQLVAWLGEKDFLAGINTHFTRHRFGNATLADFIDSLADATERDVHAWADAWLRTTGVDTLTPHLAPGENGTCALTVDRTGSRPHRIAAGLYDRDLGDDGRHLVLRERLHLDLPQTGAHPIGKRPALLLLNDGDLSYAKVRFDPESFETVRKDLSGLPEPLTRAVVWNALRDAVRDGELAPAAYLETARAHLPLETDLAIVQGVLAFASTYITDRYLTPQERPAALATLSELCRDLIRRTEDGDNPGLRLIAVRHRIDVAAHPDAIAAWLADGTVPGGPELDPELRWRVLGRLAVLGATDEAAIAAELDRDPSATGLEGAARCRAALPDPEAKARAWEAMFGSDELSNYLFTATAQGFWQPEQADLVRAYVPRYYTDAVDVADRRGPAIAEAAGRWAFPAHAVDPENLRLGEECLRDAAPIPALRRKLADQLDDLARALRVQESTKF
>NZ_CP023694.1|WP_150480287.1|2496714_2497266_-|response-regulator
MPSDTRILIVDDHEDTLYALESALAPLGYQLGRATGGDEALKQVLRGQVGLLLLDVRMPGVSGLEVVRYMRRVEQTQHIPVILLTGFGPDQELTTAAFRLGVADLVMKPVDPWSLRTKVRYLYDAHRHHLALEQEVRRLRAQVREHTETAAHSQRPALPHPDARVPSQRPSGAHAGELEKDRT
>NZ_CP023694.1|WP_150480288.1|2497519_2498356_+|alpha/beta-fold-hydrolase
MSATRGQAAEAGVRVVSADGTEIAFEQSGSGPAVVLVASALADRSDTTRLAALLAEHFTVINYDRRGRGASGDADAYAVEREIEDIAALIEHVGGSASLFGSSSGAVLALRAAAAGVNIDRLALYEPPFVVADGDDGPPRDLARQVTALLAQGRDSDAVKYFMTRVQGMPGIAVFFMRLMPKVWANLTGLARTLPYDIAVMGDTQQGKPLDAEEWKGASVPTRVLTGGKSPAAFQRAARAVIEILPQADHRALPGLNHGAVVMAPKKLAPQITEFLKG
>NZ_CP023694.1|WP_150480289.1|2498400_2498751_-|chorismate-mutase
MTTSNTGTGDVDPAVVTELARLRDSIDNIDAAVVHMLAERFKCTQQVGLLKARHQLPPADPARESRQIARLRALAEDAKLDPAFAEKFLNFIVAEVIRHHERIADEALNGSAPGRD
>NZ_CP023694.1|WP_150485311.1|2498796_2499210_-|GNAT-family-N-acetyltransferase
MGGQDDELEKRLDEELTAFNTAAADGATTEPLSVRVTDEAGDLIGGLTAWTWGSLCSVDLLWVRADQRHAGWGGRLMHAAEEEAVRRGCTDMVVSTYSFQAPGFYPRLGFRERARIEGVPGGHEDVCFHKRLSTAEL
>NZ_CP023694.1|WP_150480290.1|2499371_2500259_+|hypothetical-protein
MANDGPVEHGYPHLETVRAAITALYKRLSYDTIQTFATSVLPADVAFCDTDDLYLGAQRVAHELVRHYRLPDARMIVSFREMRHAANVELAAGPEYFVELNDRFRTHRRDIGAALAHEVMHVYLHRLDLSFPGVRDNEILTDTATTYLGAGWLLLDAYREDRAASQKLGYLTPEEFGYVLAKRALVFGEDPSVWFTSPQAYTAYVKGRELARHDEQQPPLTAAGWAGRRRYARDRRHAPTGPPQPGVRYSFTPDGGGRLRVSFPCPTCHQRIRVPVRGRVRARCALCRSVLECDT
>NZ_CP023694.1|WP_150480291.1|2500300_2501227_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSGICDGRVVVVTGAGRGLGRAHALAFAAEGARLVVNDLGVGLDGTPAAAGGTPGPDSPAGRVAEEIRAAGGEAVPHGGDIATTEGAAALVQTALETYGRLDTLVNNAGFLRDRMLVNLDEDDFDAVVRVHLKGHFLPLRHAAAHWRSEAKAGRRPEARIVNTSSGAGLLGSVGQGNYSAAKAGIVALTLVAAAELRRYGVQVNAIAPAARTRMTERTFADTMAAPDSGFDTMAPENVSPLVVWLGSAASAGVTGRVFEAEGGRITVMEGWRPGPGVDKGERWAPAEAGEAARKLLAEAGEPGRVYGA
>NZ_CP023694.1|WP_150480292.1|2501223_2501985_-|SDR-family-oxidoreductase
MELDGKVAVVTGGTRGVGAGIARAFVRAGAEVVVCARHPPEVPVPGTEFAPLDVRDAEAVRHLCGELPRLDVLVNNAGGSPHRPLTHASADRHARVVELNLVAPLTVSLAAYEHLRRARGSIVMIGSVSGGRPSPGTAAYGAAKAGLENLSRSMAVEWAPDIRVNTLVVGMVRTELSHLHYGDRDGVAAVARTVPLGRLAEPSDVGRAAVFLASDAAAYISGASLLVHGGGERPAFLDASTANNETYTEGDPR
>NZ_CP023694.1|WP_150480293.1|2502039_2502783_+|enoyl-CoA-hydratase-family-protein
MGVSTSCVEKGVAVVTVGFPPVNALPVAGWFALADAVRAAGRDPQVRCVVLTAEGRGFNAGVDIKEIQKDGNSALIGANHACAEAFAAVYDCAVPVVAAVHGFCLGGGIGLVGNADAIVASEDAVFGLPELDRGALGAATHLARLVPHHLMRALYYTSRTATAAELHAHGSVWQVVPRGELRAAALTLAREIAAKDGQLLRLAKAALNGIDPVDVRRSYRFEQGFTFEAGLSGVAGRVRAGFGKEGA
>NZ_CP023694.1|WP_150480294.1|2502783_2503620_+|CoA-transferase-subunit-A
MSDKTMTADEVVSRLSSGMTLGIGGWGSRRKPMALVRALLRSEVTDLTVVSYGGPDVGMLAAAGRIRKLVTAFVTLDSIPLEPHYRAARERGAFALTEIDEAMFMWGLHAAANRLPFLPVRAGIGSDVMRVNPGLRTVTSPYGDGETFVAMPALRLDAALVHMNRADRLGNGQYLGPDPYFDDLFCEAADTAYVSCERIVDTAELTKAAAPQTLLVKRHTVTGVVEAPGGAHFTSCAPDYGRDEAFQKTYATTPWPQFAARFLAGDEQAYRSAVGEGT

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Crispr_ID: NZ_CP023694_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_7

2981182-2981258

Orphan

Consensus_repeat	Method
CGCGTCACCGACACCACCGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_7

>merge|NZ_CP023694|7|2981182-2981258|CRISPRCasFinder
CGCGTCACCGACACCACCGGCCCCCTGGAGCTGCGCACCGGCGACGGATCCATTCGCGTCAGCGACACCACCGGCCC

>NZ_CP023694|7|6|2981182-2981258|CRISPRCasFinder
CGCGTCACCGACACCACCGGCCC	CCTGGAGCTGCGCACCGGCGACGGATCCATT
CGCGTCAGCGACACCACCGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150480616.1\|2975303_2975756_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP023694.1\|WP_150480632.1\|2992117_2992693_-\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NZ_CP023694.1\|WP_150485339.1\|2984861_2987453_-\|phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|378594
NZ_CP023694.1\|WP_150480621.1\|2979277_2979865_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380057
NZ_CP023694.1\|WP_150480627.1\|2984052_2984862_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319822
NZ_CP023694.1\|WP_150480629.1\|2988978_2989902_+\|TerD-family-protein	unknown	unknown	gnl\|CDD\|376767
NZ_CP023694.1\|WP_150480613.1\|2970662_2971307_+\|DUF1524-domain-containing-protein	unknown	unknown	gnl\|CDD\|377857
NZ_CP023694.1\|WP_150480617.1\|2976013_2976601_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP023694.1\|WP_150480618.1\|2976630_2976861_-\|DUF2277-family-protein	unknown	unknown	gnl\|CDD\|378364
NZ_CP023694.1\|WP_150480614.1\|2971386_2973024_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|277335
NZ_CP023694.1\|WP_150480628.1\|2987581_2988748_-\|HpcH/HpaI-aldolase/citrate-lyase-family-protein	unknown	unknown	gnl\|CDD\|379744
NZ_CP023694.1\|WP_150480630.1\|2989975_2990713_-\|Tellurium-resistance	unknown	unknown	gnl\|CDD\|226595
NZ_CP023694.1\|WP_150480624.1\|2981627_2983028_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP023694.1\|WP_150480615.1\|2973339_2975223_+\|FAD/NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|379196
NZ_CP023694.1\|WP_150480622.1\|2979972_2980323_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150480625.1\|2983050_2983272_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|274226
NZ_CP023694.1\|WP_150480626.1\|2983340_2984132_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP023694.1\|WP_150480631.1\|2990843_2991992_-\|DUF475-domain-containing-protein	unknown	unknown	gnl\|CDD\|237583
NZ_CP023694.1\|WP_150480619.1\|2976963_2977884_+\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
NZ_CP023694.1\|WP_150480620.1\|2978138_2979182_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176186

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150480616.1\|2975303_2975756_+\|DoxX-family-membrane-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	1.50181e-13
NZ_CP023694.1\|WP_150480632.1\|2992117_2992693_-\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	4.36865e-119
NZ_CP023694.1\|WP_150485339.1\|2984861_2987453_-\|phosphoribosyltransferase	gnl\|CDD\|378594	pfam11202, PRTase_1, Phosphoribosyl transferase (PRTase). This PRTase family is fused to a C-terminal RNA binding Pelota domain, pfam01248. These genes are found in the biosynthetic operon associated with the Ter stress response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	1.61869e-150
NZ_CP023694.1\|WP_150480621.1\|2979277_2979865_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|380057	pfam17926, TetR_C_21, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present the TetR Transcriptional Repressor found in Streptomyces coelicolor A3. Family members include HTH-type transcriptional repressor sco4008, which is suggested to be a transcriptional repressor of sco4007 responsible for the multidrug resistance system in S. coelicolor A3.	9.70209e-25
NZ_CP023694.1\|WP_150480627.1\|2984052_2984862_-\|HAD-family-hydrolase	gnl\|CDD\|319822	cd07520, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	7.88535e-07
NZ_CP023694.1\|WP_150480629.1\|2988978_2989902_+\|TerD-family-protein	gnl\|CDD\|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.29719e-65
NZ_CP023694.1\|WP_150480613.1\|2970662_2971307_+\|DUF1524-domain-containing-protein	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	1.36813e-09
NZ_CP023694.1\|WP_150480618.1\|2976630_2976861_-\|DUF2277-family-protein	gnl\|CDD\|378364	pfam10041, DUF2277, Uncharacterized conserved protein (DUF2277). Members of this family of hypothetical bacterial proteins have no known function.	6.23639e-25
NZ_CP023694.1\|WP_150480626.1\|2983340_2984132_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	8.24392e-45
NZ_CP023694.1\|WP_150480614.1\|2971386_2973024_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|277335	cd07389, MPP_PhoD, Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	5.44264e-30
NZ_CP023694.1\|WP_150480631.1\|2990843_2991992_-\|DUF475-domain-containing-protein	gnl\|CDD\|237583	PRK14013, PRK14013, hypothetical protein; Provisional.	0
NZ_CP023694.1\|WP_150480630.1\|2989975_2990713_-\|Tellurium-resistance	gnl\|CDD\|226595	COG4110, COG4110, Uncharacterized protein involved in stress response [General function prediction only].	4.12222e-53
NZ_CP023694.1\|WP_150480624.1\|2981627_2983028_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	1.99219e-06
NZ_CP023694.1\|WP_150480615.1\|2973339_2975223_+\|FAD/NAD(P)-binding-protein	gnl\|CDD\|379196	pfam13454, NAD_binding_9, FAD-NAD(P)-binding.	4.23716e-47
NZ_CP023694.1\|WP_150480625.1\|2983050_2983272_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|274226	TIGR02605, CxxC_CxxC_SSSS, putative regulatory protein, FmdB family. This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (SP:Q50229, ). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors. [Regulatory functions, DNA interactions].	1.31356e-10
NZ_CP023694.1\|WP_150480628.1\|2987581_2988748_-\|HpcH/HpaI-aldolase/citrate-lyase-family-protein	gnl\|CDD\|379744	pfam15617, C-C_Bond_Lyase, C-C_Bond_Lyase of the TIM-Barrel fold. This family of TIM-Barrel fold C-C bond lyase is related to citrate-lyase. These genes are found in the biosynthetic operon, with other enzymatic domains, associated with the Ter stress response operon and are predicted to be involved in the biosynthesis of a ribo-nucleoside involved in stress response.	7.98657e-174
NZ_CP023694.1\|WP_150480617.1\|2976013_2976601_+\|hypothetical-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	3.33175e-10
NZ_CP023694.1\|WP_150480619.1\|2976963_2977884_+\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	2.90863e-53
NZ_CP023694.1\|WP_150480620.1\|2978138_2979182_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	4.09148e-160

>NZ_CP023694.1|WP_150480622.1|2979972_2980323_+|hypothetical-protein
MATTYDFPSDLLAGQEELHQVRAELSALLKRLPWSVEPLDGFSDDNGWRKVERPASPGWTADEQAEVEKLRQREHELAVFVSTHRYWSELTGPERVWARSALKHAHESPPEETEGD
>NZ_CP023694.1|WP_150480621.1|2979277_2979865_+|TetR-family-transcriptional-regulator
MAEQPLTPRGAATYQRIIDVATQEFAEHGIAGARVERIVAAARTNKAQLYAYFGSKEGLFDAIFFGSLERIINVVPIDAADLADWAVRLYDEYLRRPDLIRLATWARLERRPAGHLVDDPDRLDDHKLRAIAEAQAAGLVRQGDPFDLMAVVIAMSMAWSPVSNVYAATAQEPPERHERRRALLRESVRRAMTAD
>NZ_CP023694.1|WP_150480620.1|2978138_2979182_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MRNTTGWQADGPSRTLRRTPLERRDLRPDDLAVRVDYCGVCHSDLHAVNARDGEGGRPLVPGHEFTGVVTETGPAVTRFTVGDPVAVGNIVDSCGECAMCRTGQENFCHAFPTLTYDGVDRHDGSATLGGYSREYVVRDRLAHPLPAGLDPAAAAPLLCAGVTVWEPLHALGVGPGSRVAVAGLGGLGHLAVKMAVALGADTSVISRSADKAADARRLGAHGLIVSTDPEQMADARDRFDVVIDTISAPHDLGPYLRLVALDGTLSQLGYLGPVTVETTDLLIGRKKLSSAGSGGRPATAAMLDFCGEHGITADIELLPSARVNEALDRLRRNDVRYRFVLDMSDLG
>NZ_CP023694.1|WP_150480619.1|2976963_2977884_+|2-dehydropantoate-2-reductase
MGNELTVAVLGPGGVGGLLAALLSRAGHRVICLSGEETARTLRTDGIRVRSGHFGDFTARVEADTHLREPVEACLVAVKHTALDAALARVPAPALADGLLVPFLNGVEHPAALRARYRPDRVAPAVIRVESTRVAPGVIEHGSPFAEIDLTGAEVPRTRLDTLAETLTAAGPATRVQDDETAALWAKMSFLAPMALLTTRYGVPLGDVRTRHRDELTALVEETAAISRACGGPGDPAQTLARYDAFPPSMRSSMQRDAEAGRPLELDAIGGALLRAAKRHGIPAPVTAGVVGELSAGPGAQISGSS
>NZ_CP023694.1|WP_150480618.1|2976630_2976861_-|DUF2277-family-protein
MCRSIKTLRPPAMPEEATDADIRAAALQYVRKVSGFRAPAAHNQEVFERAVEAVAQATAELLDGLEIRGAGAQRAS
>NZ_CP023694.1|WP_150480617.1|2976013_2976601_+|hypothetical-protein
MLEHVGWLFGSPWIYAAVALSVLLDVFLPVLPSGVLVITAATAAAAGSAADVPDILTLILCAATASVLGDLAAYRLAWRGGDRLDRAISRSRRLTTAQKRLGAALARGGGALVVLAPAGRSVVSLGAGAAHHRARDFLPWSALAGLTWAIYSVALGYFGAHWLGASWLGTVVSVGALFGAGAGAAYLMRREPRAS
>NZ_CP023694.1|WP_150480616.1|2975303_2975756_+|DoxX-family-membrane-protein
MTARLNGAQPYALGLFRIVIGLLFACHGAVALFGVLGGVDGKGGTAATGAWPNWYAAVIELVGGTLVLLGLGTRAAAFIASGAMAYAYFKVHQPQGLWPIENSGEGAAMYCWSMFLLIFTGSGAFGVDRLLARRTSAQGRQSTDHTPVAA
>NZ_CP023694.1|WP_150480615.1|2973339_2975223_+|FAD/NAD(P)-binding-protein
MSVALVGAGPRGTSVLERLCASAPELLPPGARLTVHVIDPDPPGPGRVWRTDQSPELLMNTVACQVTLFTDDSVDCSGPIRPGPSLYEWARGTLGPDEYPTRADYGRYLEWVFAQVAGDAPAGVRVETHRARAVRLDDPPGGHQALTLSDGRTLTGLSAVVLAQGHLPTTADPGRRRLADHAARHGLRHVPPANPADVDLSSVPPGEPVLLRGLGLNFFDHTALLTTGRGGRFVRDAQGLRYVPSGREPRLYAGSRRGIPYQARGDNAKGAFGRHDPLVLTPDVIAGFRKRADSGEAPDFLAEIWPLVAKEVETVYCAALLRRAGASARRCQEFTDHFLAVPHGDPEEAVLLGEFGVADADRWSWERISRPYAGRDFAHPGEWRDWLLSYLREDAAQAALGNVRGPLKAALDVLRDLRNELRLIVDHGGLPGGSRRDHLDHWYTPLNAFLSIGPPRRRIEELVALVEAGVVRVLGPRLKVTEADGAWAAHSPDVPGSAVRVRTLIEARLPETDLRKTADGLLAGLLRTGQCRPHTVDGYETGGLDVTPRPYHLIDRQGAPHSRRFAFGVPTEGVHWVTATGARPGVDSVMLSDADAVARAALRAVVTESAAQPEVNQWPNVELASIY
>NZ_CP023694.1|WP_150480614.1|2971386_2973024_+|alkaline-phosphatase-family-protein
MAGLRLGPLLRYTDGSSATVWVETSRPCTAAVRCADGAGGTAPTFQVAGHHYALIPVTGLTAGTSTTYEVLLDDTPVWPLPDSPFPPSAIHAPGSEGGLRVAFGSCRWAAPPAGGHDPVGPDALDALATRLVADPEGERPDVLLLLGDQVYADETSETTQRWLAGRRDLNDPPGNGVADYEEYTHLYYESWLDPRIRWLLSTVPSFMIFDDHDVIDDWNTSAAWLDDMRATDWWQERLLSGLMSYWVHQHLGNLSLEELAADPVYEGVRKVPDGTDVLRTFAARADADAATARWSYRRDFGRVRLLMIDSRAARVLAEDRRAMLDPGEEAWLREQVLDNPGSYDHLLLGTSLPWLLPHLVHDAEGWNAALCRGERGERWARVGEKVRRAADLEHWSAFPESFAGLAELIAEAGSGRDAPATVCVLSGDVHHAYIAEPSWSGPGPDARVVQLVCSPVHNSVPLSIRMAFRVGWSAVARAFGRGLARHGRLPRPPVGWRKTGGPWFGNQLMTLTLRGRSARLRLEQARTQEGKGPRLTTLLDSELAP
>NZ_CP023694.1|WP_150480613.1|2970662_2971307_+|DUF1524-domain-containing-protein
MPKFYARRRLSILAGLTGLIASAGLLNGPAASAALPTPVSGATARSYLASLTVATEDRTGYNRDLFPHWITQSGSCNTREVVLKRDGSNVQQDSSCAATSGSWYSVYDGATWSAASDVDIDHLVPLAEAWDSGADSWTTSRRQSFANDLTRPQLIAVTDNVNQAKGDQDPATWMPSRTTYRCTYVRAWVQVKYYYGLSVDSAEKSALQNYLANC
>NZ_CP023694.1|WP_150480624.1|2981627_2983028_+|hypothetical-protein
MTATPAQPYSPSVPRARPRRRLPRPPGPLGDALTLMALPLLAALALPAAFAGGGTRRWFGGRAESQRAEAQAAKDAAAAAFYELDTAQRDLRISIETITAVDDSPAARRAVADFDALGRRIDEASHQYINAVDAHDLDRDDLEASAAARARTELTAAKEELGRVKQELDRFTDGLGPLLGKAETQLARLAPAVERARQALLAASNALDTVRATGLKADDLAARLAALSPELTKLNQGAGQHGVPQTLERAERVTREAEAVRVEAERLPERAAEIDHRLVSLRTRAQALTTRSEQVDPILSELRRRFTVACWQDLQRVPDVASENVRRAETKLAEAHAARDEQRWADATALLSTVRALLNTTDEAVSAAGDRLHRLNAVQKDPQQEIDRTRFAIRDAQRLAMAGRNTPDPRHARPLDDAVSRLERAIATLDGRHPDYWHFLTETEAVRRAVSRVVSLIRDERGAAGH
>NZ_CP023694.1|WP_150480625.1|2983050_2983272_+|zinc-ribbon-domain-containing-protein
MPRYEYRCRTCGDTFELSRPMAESSAPAACPSGHDDTVKLLSTVAVGGSASAPAPGAGGGGGGGGCCGGGCCG
>NZ_CP023694.1|WP_150480626.1|2983340_2984132_+|DedA-family-protein
MTAIAADAGPQWVNDLMDALGAPGAGLAIALENLFPPLPSEVILPLAGFAASSGRMGLLAVLLWTTAGSVIGALALYGIGALLGRDRTVAMAARLPLVKVSDIERTETWFLRHGTKAVFFGRMIPIFRSLISVPAGVERMRLPLFLGLTTLGSAIWNTAFVLAGYLLGANWHQVTDMVSTYSKVVLAVSAVAVAVFIGVRLLRRPKGARGCDDVRLRRGARQATATPHPHDDQDTRVLRRPVLPPETPAGSAPRRGHPGREAP
>NZ_CP023694.1|WP_150480627.1|2984052_2984862_-|HAD-family-hydrolase
MPALVASDLDRTLIYSAAALALTMPDARAPRLLCVEVHESRPLSYMTETAARLLTDLGDTAVFVPTTTRTRKQYLRINLPGPAPTYAICANGGHILVDGVSDPDWHATVTARLAERCAPLAEVQEHLLRAADPVWVRKHRVADDLFAYLVVERELLDEDWVKELAVWAENRGWTVSLQGRKIYAVPKPLTKSAAMREVARRTGADLTLAAGDSLLDTDLLLAADQGWRPGHGELADTGFAAPSIRVLPDRGVLAGERILREFLEAVRGA
>NZ_CP023694.1|WP_150485339.1|2984861_2987453_-|phosphoribosyltransferase
MRRSGTAGGAEGVWSGSWVAERLGVELVGDDRLTDLLGLALRRNPKRAHLLVSNVLGKHVPQSPSVVYGYGFELGRRVRDLLGADEERRAVVLGYAETATGLGHSVADGLGLAPYLHSTRRPVVGLAPAGGFEEAHSHATSHLLLPEDPALLTGDGPLVLVDDEFSTGNTVLNTVRDLHGRYPRRRYVVVALVDMRSPADAGRLEEFAREIGARVDLVTAASGTVRLPEGVLEKGQELVARYEAESAATGDRSSAAASWPVAQFPAPLEGVAANPLGARGTARTAPTGPHPDDNRAHPHVTRIDLRWPEGLPDGGRHGFTPTHRKRLEDALPDMAARLADALPADARRVLVLGFEELMYAPLRLGRELERVTDAEVRYSTTTRSPVLAVDDPGYAIRTRLRFPAHDNPADGPGERYAYNVAGAGFDAVVAVVDSAADTPSLHASDGLLAQLAAHTPQVLLAVVPSYAPEPPHASERPSMLPEPLRGPAFSSYAPEEVGWLLQDLSDVTLEAPTEEREEAIQSGGAHYAESLPVEYQPTEQYQELFHAALADSAARIAQAVGVVTETVLAERSPRPVLVSLARAGTPVGILMRRWAQHRHGLDLPHYAVSIVRGRGIDANALRWLAEHHDPRDVVFVDGWTGKGAITRELAQALEEFEKSDGITGFDPEIAVLADPGSCVRTYGTREDFLIPSACLNSTVSGLISRTVLRADLVGPHDFHGAKFYRELAGTDVSVTFLDAVSARFPEVADAACAQAKELLAADRSPTWEGWAAVERISEEYGIHDVNLVKPGVGETTRVMLRRVPWKVLARAGAGSDLDHVRLLAEQRGVPVEEVADLPYTCVGLIHPKYTRGATGADGKAVTV
>NZ_CP023694.1|WP_150480628.1|2987581_2988748_-|HpcH/HpaI-aldolase/citrate-lyase-family-protein
MRHFGHIAPEVRKRLFYREPCTFTADSPAWLLSAALGATLYSPATRERLADDILKQAGRGVVSMVLCLEDSIDDADVGPGEENLVRQLTALADLPGADLPLLFIRVRAPEQIPDLVRRLGPAVRLLSGFVLPKFTEERGMPFLEALATGEAESGRRLFAMPVLESPELLYRESRVPTLEGISRAVDKYRDRVLALRLGVTDFCSSYGLRRGPDMTAYDVQIVASVIADVVNMLGRADGTGFTVTGPVWEYFRVQERMFKPQLRQSPFLEVQAAELREKLIEHAMDGLLREISLDQANGLLGKTCIHPSHVLPVHALSVVSHEEFSDAQDILRPERGGGGVLRSAYTNKMNEVKPHRAWAERTLLRAEVFGVANEDIGFVELLAAGLGD
>NZ_CP023694.1|WP_150480629.1|2988978_2989902_+|TerD-family-protein
MTHAMLKGSNVPLEVTTVRAVLRWTSGQGVPDVDASALLLGPDGRVRSDEDFVFYNQPRHPSGKVWRLGKKRVAEGLTDTIQTDLAGVESGVSRILLVASADGVTFDHVRALRILLYDAAGSGAEALAYFDVKPETGEETALICGELYRRGEAWKFRALGEGYSNGLQGLATDYGISVDESEAMEETSGQPATVGADRPATADPAQPTTSAPAQPAPEVSRPLPPEQPTVVPAQPGYGYPPQQPPATQPAYGYPHPTSQPAYGYPQAPATAGVTGAQSGYGYPEPVAAAAPDPDFRLPPQGPQFIGR
>NZ_CP023694.1|WP_150480630.1|2989975_2990713_-|Tellurium-resistance
MGLFDGLRRGRDVQFDSGHAATNAIELTKRRAQISLTKQSAATGHLRVNLSWRMRTSDIGGPQRESLLRHPFRALKPPEVIGHSQSVVNVDLDLGCLYELQDGTKGVVQPLGGYFGDVNAAPYVKLSGDDRFGSASGETMYINLDHRDSIKRLLVFVYIYDATPAFDRAHAIVTLYPSNGPRIEIHLDERQPQARSCAVVMIEKVKDEIIVRREAKFVYGFQAELDRLYGWGLQWGRGYKTKVER
>NZ_CP023694.1|WP_150480631.1|2990843_2991992_-|DUF475-domain-containing-protein
MLLKTFGWSFAVTALGLVAAVFYGGWAALGLVAILSVLEISLSFDNAVVNAGILKKMSAFWQKIFLTIGILIAVFGMRLVFPVVIVALSAQLGPIEAVDLALTDKDQYQQLVTDAHPAIAAFGGMFLLMIFLDFIFEDRDIKWLGWLERPLAKLGKVDMLSVCIALIVLLISAMTFATHAHQHGGTHVDKAETVLLSGIGGLITYMIVGGLSGYFEDKLEEEEEREHEQEEEAVRSGKPRSAVVVAGKAAFFMFLYLEVLDASFSFDGVIGAFAITNDIVLMALGLGIGAMYVRSLTVYLVREGTLDDYVYLEHGAHYAIGALAMILLVTIRYEINEFITGSVGVILIAWSFWSSVRRNRALAAAEGKAAGSDDKTEVSSGV
>NZ_CP023694.1|WP_150480632.1|2992117_2992693_-|TerD-family-protein
MGVTLAKGGNVSLSKAAPNLTQVVIGLGWDARSTTGAPFDLDASALMCSGGRVLGDEWFVFYNQLKSPDGSVEHTGDNLTGEGDGDDESLLIDLSKVPPHCDKIVFPVSIHMADERGQTFGQVSNAFIRVVNQADGQELARYDLSEDASTETAMIFGEVYRYQTEWKFRAVGQGYASGLRGIALDFGVNVS

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Crispr_ID: NZ_CP023694_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_8

4193538-4193669

Orphan

Consensus_repeat	Method
CGCAGGACCTGCACGCCACGGGCG	CRISPRCasFinder
AGGACCTGCACGCCACGG	CRT

3 spacers

The CRISPR arrays of NZ_CP023694_8

>merge|NZ_CP023694|8|4193538-4193669|CRISPRCasFinder,CRT
CGCAGGACCTGCACGCCACGGGCGGCGAGGCCTCGACCGAGGACCTGCACGCCACGGAAGAGGGCGCCGTGAAGACGCAGGACCTGCACGCCACCGGCGAGCCGCTGGAGACCAAGGACCTGCACGCCACGT

>NZ_CP023694|8|7|4193538-4193636|CRISPRCasFinder
CGCAGGACCTGCACGCCACGGGCG	GCGAGGCCTCGACCGAGGACCTGCACGCCACGGAAGAGGGCGCCGTGAAGA
CGCAGGACCTGCACGCCACCGGCG

>NZ_CP023694|8|2|4193541-4193669|CRT
AGGACCTGCACGCCACGG	GCGGCGAGGCCTCGACCG
AGGACCTGCACGCCACGG	AAGAGGGCGCCGTGAAGACGC
AGGACCTGCACGCCACCG	GCGAGCCGCTGGAGACCA
AGGACCTGCACGCCACGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150481496.1\|4185917_4187036_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225052
NZ_CP023694.1\|WP_150481497.1\|4187148_4187919_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187600
NZ_CP023694.1\|WP_150481501.1\|4194198_4194465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150481494.1\|4182650_4184102_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143408
NZ_CP023694.1\|WP_150481503.1\|4195497_4197108_-\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|236072
NZ_CP023694.1\|WP_150485407.1\|4187927_4188863_-\|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274680
NZ_CP023694.1\|WP_150481492.1\|4181311_4182124_-\|endonuclease	unknown	unknown	gnl\|CDD\|197314
NZ_CP023694.1\|WP_150481506.1\|4198776_4199550_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|119339
NZ_CP023694.1\|WP_150485408.1\|4199632_4200583_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP023694.1\|WP_150481502.1\|4194581_4195508_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|225921
NZ_CP023694.1\|WP_150481499.1\|4190297_4193300_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276938
NZ_CP023694.1\|WP_150481495.1\|4184098_4185829_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238622
NZ_CP023694.1\|WP_150481500.1\|4193803_4194199_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	unknown
NZ_CP023694.1\|WP_150481504.1\|4197204_4198365_+\|lipid-transfer-protein	unknown	unknown	gnl\|CDD\|181147
NZ_CP023694.1\|WP_150481505.1\|4198366_4198780_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224462
NZ_CP023694.1\|WP_150481498.1\|4188844_4190080_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|368185
NZ_CP023694.1\|WP_150481508.1\|4203893_4204616_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911
NZ_CP023694.1\|WP_150481491.1\|4180291_4181143_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197775
NZ_CP023694.1\|WP_150481507.1\|4200606_4201215_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235782
NZ_CP023694.1\|WP_150481493.1\|4182236_4182629_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|281995

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150481496.1\|4185917_4187036_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|225052	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion].	2.59167e-43
NZ_CP023694.1\|WP_150481497.1\|4187148_4187919_-\|SDR-family-oxidoreductase	gnl\|CDD\|187600	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.01908e-78
NZ_CP023694.1\|WP_150481494.1\|4182650_4184102_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143408	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.	0
NZ_CP023694.1\|WP_150481503.1\|4195497_4197108_-\|AMP-binding-protein	gnl\|CDD\|236072	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP023694.1\|WP_150485407.1\|4187927_4188863_-\|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase	gnl\|CDD\|274680	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family. Coenzyme F420 has a limited phylogenetic distribution, including methanogenic archaea, Mycobacterium tuberculosis and related species, Colwellia psychrerythraea 34H, Rhodopseudomonas palustris HaA2, and others. Partial phylogenetic profiling identifies protein subfamilies, within the larger family called luciferase-like monooxygenanases (pfam00296), that appear only in F420-positive genomes and are likely to be F420-dependent. This model describes a domain found in a distinctive subset of bacterial luciferase homologs, found only in F420-biosynthesizing members of the Actinobacteria. [Unknown function, Enzymes of unknown specificity].	9.60033e-71
NZ_CP023694.1\|WP_150481492.1\|4181311_4182124_-\|endonuclease	gnl\|CDD\|197314	cd09080, TDP2, Phosphodiesterase domain of human TDP2, a 5'-tyrosyl DNA phosphodiesterase, and related domains. Human TDP2, also known as TTRAP (TRAF/TNFR-associated factors, and tumor necrosis factor receptor/TNFR-associated protein), is a 5'-tyrosyl DNA phosphodiesterase. It is required for the efficient repair of topoisomerase II-induced DNA double strand breaks. The topoisomerase is covalently linked by a phosphotyrosyl bond to the 5'-terminus of the break. TDP2 cleaves the DNA 5'-phosphodiester bond and restores 5'-phosphate termini, needed for subsequent DNA ligation, and hence repair of the break. TDP2 and 3'-tyrosyl DNA phosphodiesterase (TDP1) are complementary activities; together, they allow cells to remove trapped topoisomerase from both 3'- and 5'-DNA termini. TTRAP has been reported as being involved in apoptosis, embryonic development, and transcriptional regulation, and it may inhibit the activation of nuclear factor-kB. This family belongs to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds.	1.31807e-22
NZ_CP023694.1\|WP_150481506.1\|4198776_4199550_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|119339	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.	6.67479e-42
NZ_CP023694.1\|WP_150485408.1\|4199632_4200583_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.0622e-31
NZ_CP023694.1\|WP_150481502.1\|4194581_4195508_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|225921	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism].	4.08806e-76
NZ_CP023694.1\|WP_150481499.1\|4190297_4193300_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276938	cd15831, BTAD, Bacterial Transcriptional Activation (BTA) domain. The Bacterial Transcriptional Activation (BTA) domain is present in the putative transcriptional regulator Mycobacterium EmbR and the related Streptomyces antibiotic regulatory protein (SARP) family of transcription factors, which includes DnrI and AfsR, among others. Members of this family contain an N-terminal DNA-binding domain, followed by the BTA domain, and many have diverse domains at the C-terminus. EmbR contains an C-terminal forkhead-associated (FHA) domain, which mediates binding to threonine-phosphorylated sites in a sequence-specific manner. The BTA domain of EmbR contains three Tetratricopeptide repeats (TPRs) and two C-terminal helices. The TPR motif typically contains 34 amino acids, and 5 or 6 tandem repeats of the motif generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein.	1.87865e-42
NZ_CP023694.1\|WP_150481495.1\|4184098_4185829_-\|amidohydrolase-family-protein	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	1.04096e-91
NZ_CP023694.1\|WP_150481504.1\|4197204_4198365_+\|lipid-transfer-protein	gnl\|CDD\|181147	PRK07855, PRK07855, lipid-transfer protein; Provisional.	0
NZ_CP023694.1\|WP_150481505.1\|4198366_4198780_+\|hypothetical-protein	gnl\|CDD\|224462	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only].	5.73089e-19
NZ_CP023694.1\|WP_150481498.1\|4188844_4190080_-\|amidohydrolase-family-protein	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	1.3336e-30
NZ_CP023694.1\|WP_150481508.1\|4203893_4204616_-\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	5.07606e-29
NZ_CP023694.1\|WP_150481491.1\|4180291_4181143_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	2.42899e-10
NZ_CP023694.1\|WP_150481507.1\|4200606_4201215_-\|hypothetical-protein	gnl\|CDD\|235782	PRK06341, PRK06341, single-stranded DNA-binding protein; Provisional.	8.77084e-05
NZ_CP023694.1\|WP_150481493.1\|4182236_4182629_+\|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl\|CDD\|281995	pfam04075, F420H2_quin_red, F420H(2)-dependent quinone reductase. This family of proteins is found in the genera Mycobacterium and Streptomyces. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. Rv1558 is an F420H(2)-dependent quinone reductase involved in oxidative stress protection.	2.2904e-30

>NZ_CP023694.1|WP_150481499.1|4190297_4193300_+|tetratricopeptide-repeat-protein
MDGVPDGVPRVPEQRRSDSSAEPPKSAETGGSAERAALRFGVLGPVRAWRGDEPLTTGSPQQRALLAALLLREGRTATAAELIDALWGEEPPSQALAALRTYASRLRKVLDPGVLVSESGGYAIRVLGDGALDVAVAQDLATEAEKARSAGDLCHAREVLRRALALWDGETLAGVPGPYAEAQRVRLEEWRLQLVESRLDMDLEQGCHAEAVSELTALTAAHPLRERLRELLMLALYRSGRQAEALAVYADTRRLLADELGVDPRPGLSELQQRILQADPGLAEPSSPAPEPASVPVRPAQLPATVPDFTGRSGFVRELGGILAAAGNRVMAVSALAGIGGVGKTTLAVHVAHQARGAFPDGQLYVDLQGAGARAAEPETVLGSFLRALGTADTAIPDSLEERAALYRSVLAGRRVLVLLDNARDAAQVRPLLPGTDGCAALVTSRVRMVDLAGAHLIDLDVMAPDEALALFTKIVGEERVASERKAALDVVAACGFLPLAIRIAASRLAARRTWTVSVLAAKLADERRRLDELQAGDLAVKATFELGYGQLEPAQARAFRLLGLADGPDISLPAAAAILDLPVEDTEDLLESLVDTSLLESAAPGRYRFHDLVRLYARACAERDEQPPSERAAALSRLLDFYLASAAGVYAIERPGDGLVDHLEPTSYPGLRFENRHTAQDWLYAEAICLLACVRQSAGHPDTLPRAIDLLWAAHDLSESGANSREYEATAQALLEAARQFGLARSEARALTTLVNVHHVGGRFERADQEAERVIVLAQEADDLLPVCWARNARGIIALYQNRHEDGEEHLSRAIEHFRALGNRPGEASALCNLSRIHLATGRTQSAVALAQQGIDIYDAMGNSMRGANARYALGLALTQSGELGDAAGRLQEALEVFRDSRQRLWEGMSLFRLAEVDLAARRPAQAAANAEMALTVLRGIGGDWRRGNVLTVLGRALSGIGQTGRAQVCWQEAAAIYEELGSPEAAEVRALLSPVRAA
>NZ_CP023694.1|WP_150481498.1|4188844_4190080_-|amidohydrolase-family-protein
MDTHASTFPLIISVDDHTVEPATVWQDRLPEKYRGAGPRIVRAPVKEMTFLGGRFKPVMGAPGDDGPVGDWWVYEDLRRPLTRLDTAVGYDRDEIRLEVITYEQMRPGSYDVPARLADMDVNHVQSALCFPTFPRFCGQTFTEAKDHELGLLCVRAYNDWMVEEWCGPEAHGRLIPLTLIPLWDPELAAEEVRRNAARGVRAVAFSEIPPYLGLPSIHTDDWDPFLAACDETGTVVAMHIGSSSRMPSTSADAPPAVGSTITFANCCFSMVDWLMSGKFEQFPNLKVMYAEGQIGWIPYILERADVVWEENRGWGGVADKVHRPPSELFAEHVYGCFFDDAFGLRNLDAIGLNNVLYETDYPHSDSTWPKSREVGEAQMGHLEPEVVERIVRRNAIELLGLSDDGLWDGTR
>NZ_CP023694.1|WP_150485407.1|4187927_4188863_-|TIGR03619-family-F420-dependent-LLM-class-oxidoreductase
MGRDAVSLAYGIQLPVQSQSTLYTEPWEAAAGPEDLLAVARAADRAGFAYLASCDHIAIPRRLASAMSTVWYDPVATLAFLAAATERTRLLSHVAVVGLRHPLLSAKQYATLDHLSGGRLVLGVGAGHVREEFEVLGADFERRGAVLDESIDALRAALGPDEFPEHHGKLYDFEGLGQRPRPAQDRVPLWVGGSSPAALRRAALKGDGWLPQGDPRDRLPAQIARIRELRERAGASGPFTVGAIAEPLYVGAPRWDVGRRTLTGGPQELAESLRAYRAMGVDQIQVRFRSRDRTELTDQIAAFGAEVAPQL
>NZ_CP023694.1|WP_150481497.1|4187148_4187919_-|SDR-family-oxidoreductase
MGKLDGRVVIITGAARGQGEQEARLFTAEGARVVVADVLDDQGEALAKEIGARYVHLDVGREDDWEAAVAAAKDAYGRVDGLVNNAGILRFDSLLDTPLDEFMRVVQVNQVGCFLGIRAVAPELAEGGTIVNTASYTGLTGMAGVGAYAASKHAVVGLTRVAALELAGRGIRVNAVCPGAIDTAMSNPARLDPDADPEESARGLDRLYRKLVPLGRVGQPEEVARLALFLSCDDSSYITGQPFVIDGGWLAGVSVI
>NZ_CP023694.1|WP_150481496.1|4185917_4187036_-|LLM-class-flavin-dependent-oxidoreductase
MEFGVFVQGYVGKRAETDPLAEHKALMEETEYVIQADKSGFKYAWASEHHFLDEYSHLSANDVFLGYLAHATERIHLGSGIFNPLAPVNHPVKVAEKVAMLDHLSKGRFEFGSGRGAGSHEILGFMPGVTDMNHTKEIWEETIAEFPKMWLQDEYAGFQGKHWSLPPRKVLPKPYGGSHPAMWYAAGSPPSYAMAAQKGLGVLGFSVQKVSDMEWVLEQYKTAIVDAEPVGDFVNDNVMVTTTAICAPTHEEAVRIAANGQLHYLPSLVFRYHDTFPRPEGFPVWPETLPEYTEELVEVLIEEELLICGDPDEVLTQCKRWEQAGADQLSFGLPVGVPKDETLQTIRLVGEHVIPKIDTDPVHRTSRFRRGV
>NZ_CP023694.1|WP_150481495.1|4184098_4185829_-|amidohydrolase-family-protein
MLDHVIKGATVVDGTGGPGRVADVGIQDGRIAVIGEVAQEARTSEDAHGLVLAPGFVDPHTHYDAQLFWDPYATPSLNHGVTTVAGGNCGFTLAPLHPDRPEDADYTRRMMSKVEGMALVALEEGAPWTWHSFGEYLDALEGRIAVNAGFMVGHCALRRYVMGPQAIGGQPTGEQLAAMVRLLREAMDAGAWGLSTTQSTSHSDGDGKPVASRHAGPAELLALSRAVGEHEGTQIEAIVAGCLDQFSDAEIDLFAEMSAAAGRPLNWNVLTIDAGVPERVPRQLLASEQARKSGGRVVALTMPILTPMNMSLGTFCALNLIPGWGPILGLPVPERIEKLRDPDVRDGMLRRARSKEAGVFRRLANFGRYVIGDTYSEANAGLTGRVVEDIAEERGQEPFACLVEICANDELRTVLWPMPPDNDPASWALRAETWQHEDVLLGGSDAGAHLDRMCGAPYTTRFLGDCLRGRKLVGVEQAVKMLTDDPARLFGLRERGQVREGWHADLVLFDPERIDAGPATLVHDLPGDSPRLDSRALGVRAVWVNGVEAIRDDVVTGAVPGRVLRSGRDTETVSTR
>NZ_CP023694.1|WP_150481494.1|4182650_4184102_-|aldehyde-dehydrogenase-family-protein
MTARQPLFVGGSWVEPDGGHYEVIDPATEQTVGWAPEASRDQVHAACAAAREAFGPWSATPAEERAAMLARAADIIRDRLVPYAELARAETGATTGTARGMQVGVAAARFRRYARVEPAEWAIPPQINEAGPMGRAGVMGALAVRQPVGVVTCITSYNNPWANPAGKIAPALAMGNTVVVKPAPQDPLSVYRMAQALEAAGVPPGVVNVVSGARTEVGEAAVASPDVDMVSFTGSTAVGQRIAEVCGRDMKRQLMELGGKGAAVVLDDADIGSALSGIGTTFSFYSGQICTAPTRVLAQRGIYDRLVGQLAEYAARLKVGDPREPDTVVGPVISAAHRDRVESYVELGRKEGAVVVTGGQRPSLPTGFYVTPTLLGDCTNDMRVAREEIFGPVVAVIPFDDEEEGVALANDTDYGLIDYVWSSDVARAFRVARRLRAGGVGINTVGRNMEAPFGGFKKSGVGRDVGSYALHAYSEVQAIVWPG
>NZ_CP023694.1|WP_150481493.1|4182236_4182629_+|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MSRVADLRFRAATSFQRRVNPIVRRLPLQTVLETKGRVSGLPRRTPVGGRRVGDSFWLVSEFGERSQYVRNIKADPRVRVRIRGRWHTGTAHLLPDDDPVARLRRLPKVNGLGVRAFGTDLLTVRVDLAG
>NZ_CP023694.1|WP_150481492.1|4181311_4182124_-|endonuclease
MRIVTWNLWWRFGPWQARQKAILTALRELRPDVVGLQEVWAADGENLAEWLAGELGLHCAWAASPAPERWRRRIGDPTVDIGNAVLSRWPVVDRDMLPLPAPADTDDGRLALYARLAGPGHDIPFFTTHFTSAVHASAVRCRQVAALAEFVDRHRGDTPFPPVVTGDLNAWPDSDEIRLLGGYKTAPAVPRQVLLDAWEYADPAAPSATWDAANPYVAPTHEPSARIDYIHVGPPGPGGLGHVRDVRRACDGPVDGVWPSDHAAVVADLA
>NZ_CP023694.1|WP_150481491.1|4180291_4181143_+|helix-turn-helix-domain-containing-protein
MPARPPLTARRLRLAVELRKMRERAGMTATEAARALGTSQGQLSNVESGRFGVSPERIRALARIYSCADQGFIEALVDLATDKTFGWWESYREVLPSGLLDLAELEHHAIAVRTAYTSHMPGLLQTADHAREIFRHVIPSPTPPEVEHRVSHRIKRQGVLYGDNPTPYGTTVHEAALQMRVGGRNVARTQLQHLLDMSEREHITIRVLPYDVGAFPGAGQSINYLYGTVPQLDTAQLDQFHGPALLDAEALLDKYRNLLDIVEAIALSPEKSRDLIHSIAQNL
>NZ_CP023694.1|WP_150481500.1|4193803_4194199_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MRPSCYVLDCEALSRAVLGDRAMLARLKDAHRSGIRVVTSSMTLIEAYHGRVQRAAWAWAMSRVVVEPVTREVADAAVVLLQDTGLHGHEYAIDAALAVIAGRQPGGVVLFTSDEDDMGKLCGPGVKVVPV
>NZ_CP023694.1|WP_150481501.1|4194198_4194465_-|hypothetical-protein
MATKKYTVTLPEELAEEIRQEVGSGGFSAYVARAIERQREQDRLGELVAWLEGEHGPVTDDELASAEAERRELESHFAEQGEQHRKAS
>NZ_CP023694.1|WP_150481502.1|4194581_4195508_+|SMP-30/gluconolactonase/LRE-family-protein
MPGEQPQTYETLDERFRTGRCQAGDSRLETLFEGCRWAEGPVYVPAGRYLLWSDIPNDRLLRWDETTGSVGVFRSPAGYPNGNTLDGQGRLITCEQGNRRVTRTEHDGSVTVIAERFRGKRLNSPNDAVVRSDGSVWFSDPEFGIATDYEGHRAESEIGARNVYRVDPGNGEVRVAAEGFQGPNGLVFSPDERKLYVSDSLANHIRVFDVRPNGTLSGGDVFAECRNGNFDNIRFDDEGRLWAAALHGGVHCYDPDGTLLGRVLVPGTVANIRFGGARRNRMFIAADSTLYSLVMSVTGTPPLPSVSR
>NZ_CP023694.1|WP_150481503.1|4195497_4197108_-|AMP-binding-protein
MRADTEWGSIPGLVRTAAERYADAEAVVEGRTRITYAELGARVERAAAACLAHGIRPGDRVGIWAPNTLDWIVSALGAVSAGAVLVPLNTRFKGAEAADVLRRSGARLLFVTGTFLGTSYVASLRRAAGQGPGSGPLPGLPALEQVVVLSEDAPADFLTWKDFLASGEAVGTAQVRARADAVDGSRPSDLIFTSGTTGRPKGAVITHAQTLRAYGIWSDLAGLTRGDRYLIVNPFFHTFGYKAGVIACLTRGATMIPQPVFNVNTVLANIAAERVSVLPGPPTLLQSLLDHPARDAHDLSALRLVVTGAAVVPLRLVERLRGELGVGTVLTAYGLSEAGGVVTMCRRGDDPTVIASTSGRAIPGTEVRVVNSRGEPLAPGTPGEVLVRGFNVMTGYYEDEAATAEVLSEDGWLRTGDVGVLDAAGNLRITDRLKDMFIVGGFNAYPAEIEQLLGLHPDVADVAVIGVPDARLGEVGRAYVVRRPGALVTADDLIAWSRREMANYKVPRTVEFVAELPRNASGKVVKGALRDGLLSG
>NZ_CP023694.1|WP_150481504.1|4197204_4198365_+|lipid-transfer-protein
MAAGSGGLKDATAIVGIGQTPFAKRLPEDERTLACRAVLAALDDAGIAPGEVDALASYTMEETDEVELAKACGFGDLTFFSKVGYGGGGSCATVAHLAAAVATGQANVGVAWRSRKRGSGPRPWTSTAVQLPTPAQWTRPFGLLRPVDEIAMLARRYMHEYGATRDHLFNVALACRNRANQNPAAIMYDRPLTREMYMTSRWISEPLCLFDNCLETDGALACVVVSAERARDCRRKPVYVHSAAQSLPAQHHGMVNYWNDDPLTGPAWTAARHLWKHSDLTPQDVDVAQIYDAFTPLVLLSLEGYGFCERGEGGAFTEGGALEIGGTLPVNTGGGGLSEAYVHGFNLVNEGVKQLRGTSTAQVPDASACLVTAGEGVPTSALLLRS
>NZ_CP023694.1|WP_150481505.1|4198366_4198780_+|hypothetical-protein
MLRPVTDTDGAPFWEYTARGELRVQACAGCGEFRFPPRPCCPHCQSFEAEWRRVSGRGRVWSYVVPHPPLLPGYAELAPYNVVVVELDEAPRIRLVGNLVAGPGEPVNSLATDRLRIGTRVRAVFDDGLPRWVPERS
>NZ_CP023694.1|WP_150481506.1|4198776_4199550_+|enoyl-CoA-hydratase/isomerase-family-protein
MSSVLVSADEDSGVAVVTLNRPDRLNAIDLEMAGELARVWREVRFDDSVRAVVLTGAGERAFCTGIDRDAVVPQPSSPYAQDDPLLGIGPKANDLWKPVVAAVRGMACGGAFYLLGEAEFVVADTTAAFFDPHTTYGMVSAYESVLMAQRMPYGEVARMALMGTAERISARRAYEVGLVSELVAEGEALGAARACAAVIAGYPTEAVQGTVRALWAASEAGRSRGVAQAPHLIALGNAAGEEQARLFAGRRREYRWR
>NZ_CP023694.1|WP_150485408.1|4199632_4200583_+|alpha/beta-fold-hydrolase
MIDVNGIRLHIAEQGEGPLVVLLHGFPESWHSWRHQFGPLAEAGFRVVAPDQRGYGRSDHPEDVEAYSILHLVGDVVGLVHALGEERAFVVGHDWGAPVAWHTALLRPDVVRGVAGLSVPPPFRGGQPPLRTMRERFEGRFYWNYFEQPGVAEAEFTADTRATLRKLLYSASGDAPGAGRPEQALVDPERGWLADAPDPEVLPGWLTEEDLDALTDSYARGFTGALNWYRNLDRNWELTAPWQGAVVSPPALYVYGDRDLVPAFPGTPELIEKLPELMPGLRRKPLVLPGCGHWTQQERPAEVNEALLDFLTELRD
>NZ_CP023694.1|WP_150481507.1|4200606_4201215_-|hypothetical-protein
MRIRGRRLRFTAVSVLVVLALTGFSTGRGRGGGHGGHGGSGGGGGGGCSSSSQDHDSSRSSTSGGGSYGSGGSGGSYGSDDDDDRGTSGGGSYNRRPHYGSTPTSSSGSGKALRDGTAKLVTCATPASPHATVEVGNPNGRKATFSVSVTFVDARGITVVDRYADVTVPAQGRATVEVEVGAPGLVDSVDHCEVDRQALVDD
>NZ_CP023694.1|WP_150481508.1|4203893_4204616_-|VOC-family-protein
MAENRASVYAEGVPCWVDAQLADVEAGKRFYGELFGWTFEDWFGPFAQALKDGEPVAALVRKMDGRLPTVWTVYFATPDAAALARRVRAAGGQVVSSPVPAGELGVTALVTDPEGAVFALWQPAEHPGFGRRHEPGTFAWAELYARDTEAANAFYGDLFQEALFGPDAEPDFGRAPVSDVFPAEMPPHFLVHFAVEDVPAALEDVTRLGGRIQAPPFDTSYGTVAVVTDNQGASFALLHR

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Crispr_ID: NZ_CP023694_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_9

4790693-4790798

Orphan

Consensus_repeat	Method
GCGGGTAGCCGTACCCGCCGGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_9

>merge|NZ_CP023694|9|4790693-4790798|CRISPRCasFinder
GCGGGTAGCCGTACCCGCCGGGGCGGCCGCCGGGCGGCGGCGCGGCCGGCATGGGCGGGGCGCCCGCGGGCGCGGCGGCCGGCGGGTAGCCGTAGCCGCCGGGGCG

>NZ_CP023694|9|8|4790693-4790798|CRISPRCasFinder
GCGGGTAGCCGTACCCGCCGGGGCG	GCCGCCGGGCGGCGGCGCGGCCGGCATGGGCGGGGCGCCCGCGGGCGCGGCGGCCG
GCGGGTAGCCGTAGCCGCCGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150485448.1\|4800577_4801336_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223560
NZ_CP023694.1\|WP_150481942.1\|4798919_4800353_+\|DUF2252-family-protein	unknown	unknown	gnl\|CDD\|313268
NZ_CP023694.1\|WP_150481943.1\|4801827_4802961_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|224871
NZ_CP023694.1\|WP_150481928.1\|4779720_4780359_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|181107
NZ_CP023694.1\|WP_150481932.1\|4785203_4786682_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_CP023694.1\|WP_150481938.1\|4794567_4795908_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP023694.1\|WP_150481939.1\|4795852_4796788_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187552
NZ_CP023694.1\|WP_150481937.1\|4791889_4792423_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP023694.1\|WP_150481944.1\|4803392_4804166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_167537388.1\|4782452_4782623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150481930.1\|4781598_4782351_+\|class-E-sortase	unknown	unknown	gnl\|CDD\|320679
NZ_CP023694.1\|WP_150481941.1\|4798086_4798785_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP023694.1\|WP_020273126.1\|4801394_4801724_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP023694.1\|WP_150481935.1\|4789843_4790353_-\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_CP023694.1\|WP_150481933.1\|4786678_4788121_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843
NZ_CP023694.1\|WP_167537231.1\|4779526_4779724_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150481929.1\|4780355_4781585_+\|class-E-sortase	unknown	unknown	gnl\|CDD\|320679
NZ_CP023694.1\|WP_150481934.1\|4788148_4789711_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP023694.1\|WP_150481940.1\|4796784_4797927_-\|ScbA-protein	unknown	unknown	gnl\|CDD\|367638
NZ_CP023694.1\|WP_150481931.1\|4783007_4785035_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_020273126.1\|4801394_4801724_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	7.97008e-25
NZ_CP023694.1\|WP_150481942.1\|4798919_4800353_+\|DUF2252-family-protein	gnl\|CDD\|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	5.08255e-162
NZ_CP023694.1\|WP_150481943.1\|4801827_4802961_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	2.89353e-35
NZ_CP023694.1\|WP_150481929.1\|4780355_4781585_+\|class-E-sortase	gnl\|CDD\|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	3.02188e-49
NZ_CP023694.1\|WP_150481932.1\|4785203_4786682_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	9.25714e-90
NZ_CP023694.1\|WP_150481938.1\|4794567_4795908_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	8.20964e-75
NZ_CP023694.1\|WP_150481939.1\|4795852_4796788_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187552	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs. Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.30382e-30
NZ_CP023694.1\|WP_150481937.1\|4791889_4792423_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	2.24453e-32
NZ_CP023694.1\|WP_150485448.1\|4800577_4801336_+\|hypothetical-protein	gnl\|CDD\|223560	COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones].	0.000145767
NZ_CP023694.1\|WP_150481930.1\|4781598_4782351_+\|class-E-sortase	gnl\|CDD\|320679	cd05830, Sortase_E, Sortase domain found in the class E family of sortases. Class E sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Actinobacteria). Genes encoding class A and E sortases are never found in the same organism, and similar to class A sortases, the genes encoding class E sortases are not positioned adjacent to genes encoding potential protein substrates, suggesting a housekeeping sortase function of class E sortases in some high G + C Gram-positive bacteria. Similar to class A sortase, class E sortases are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They recognize an LAXTG sorting signal, instead of the canonical LPXTG motif processed by class A sortases. The prototypical class E sortase from Corynebacterium diphtheria (named Cd-SrtF) is a non-polymerization sortase that is not required for pilus polymerization, and proceeds to complete the assembly process by anchoring the polymer to the cell wall peptidoglycan. Moreover, in Streptomyces coelicolor, one or both of Staphylococcus aureus SrtA homologs may function as class E sortase responsible for the cell wall anchoring of the long chaplin proteins (ChpA-C) containing an LAXTG sorting signal, which presumably mediate aerial hyphae formation. The family also includes some class E sortase homologs from Gram-negative and Archaebacterial species, but the functions of these enzymes are unknown.	1.61017e-43
NZ_CP023694.1\|WP_150481941.1\|4798086_4798785_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.01468e-14
NZ_CP023694.1\|WP_150481935.1\|4789843_4790353_-\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	2.8144e-18
NZ_CP023694.1\|WP_150481933.1\|4786678_4788121_-\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	6.48562e-80
NZ_CP023694.1\|WP_150481940.1\|4796784_4797927_-\|ScbA-protein	gnl\|CDD\|367638	pfam03756, AfsA, A-factor biosynthesis hotdog domain. The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a HotDog domain.	5.621e-24
NZ_CP023694.1\|WP_150481928.1\|4779720_4780359_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|181107	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II.	6.43371e-143
NZ_CP023694.1\|WP_150481934.1\|4788148_4789711_-\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	1.48625e-81
NZ_CP023694.1\|WP_150481931.1\|4783007_4785035_-\|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.87852e-130

>NZ_CP023694.1|WP_150481935.1|4789843_4790353_-|FHA-domain-containing-protein
MSELTLTVMRLGFLAVLWLFVIVAVQVIRSDLFGTRVTQRGSRREAGRQQQAARQAPPQQRQQSGSGRRGRNAPTKLVVTEGTLTGTTVALQGQTITLGRAHDSTIVLDDDYASSRHARIYPDRDGQWIVEDLGSTNGTYLDRNRLTTPTPIALGAPIRIGKTVIELRK
>NZ_CP023694.1|WP_150481934.1|4788148_4789711_-|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MSLSLRFAAGSHKGMIREGNEDSGYAGPRLLAIADGMGGAAAGEVASSEAISTIVALDDDVPGSDILTSLGTAVQRANDQLRSMVEEDPQLEGMGTTLTALLWTGQRLGLVHVGDSRAYLLRDGVLTQITQDHTWVQRLVDEGRITEEEATTHPQRSLLMRALGSGDHVEPDLSIREVRAGDRYLICSDGLSGVVSHQTLEDTLASYQGPQETVQNLIELALRGGGPDNITVIVADVLDLDTGDTLAGQLSDTPVVVGAVAENQHQLQDNSFMQTPAGRASGLGRQGHGQGGGGEFGPPGSGDTTGYIPAAGLGYGDDDFDKPRKKGRWLKRSFYGALALAVIGGGLYGGWRWTQTQYYVGAEGEHVALYRGISQDLAWVSLSEVEKDHPEIELKYLPPYQQKLVEATIAEGGLENAQAKIQELSVQASACKKEAQRRQAESQNNSKTGEGEAGGTTGTTPASFTSKATPTPNPSNPSNPSGSPSAPEKSPNPSTTAPTPSPGPSLSEEEQKVVSLCGKQ
>NZ_CP023694.1|WP_150481933.1|4786678_4788121_-|FtsW/RodA/SpoVE-family-cell-cycle-protein
MSGTNTSPTHHTSTIGAIGAPSRRNTELALLAFAVVIPVFAYANVGLALNDSVPPGLLSYGLGLGLLAGVGHLVVRKFAPYADPLMLPLATLLNGLGLVAIWRLDQSKRLSNYAEAAPRQLLYSAMGVALLAVVLIFLKDHRVLQRYTYISMAGALFLLILPLVPGLGANIYGAKIWIKIPGLGTLQPGEFAKIALAVFFAGYLMVKRDALALASRRFMGLYLPRGRDLGPILVVWVISILILVFETDLGTSLLFFGMFVIMLYVATERTSWIVFGLLMSAVGAVGVASFEPHIQTRVQAWLDPMREFELSRAGVQDGVVHSEQAMQALWAFGSGGTLGTGLGQGNSDLIGFAANSDFILATFGEELGLAGVMAILLLYGLIIERGVRTALAARDPFGKLLAIGLSGAFGLQVFVVAGGVMGLIPLTGMTLPFVAYGGSSVIANWALIGILLRISDTARRPAPAPAGNPDAEMTQVVRPS
>NZ_CP023694.1|WP_150481932.1|4785203_4786682_-|penicillin-binding-protein-2
MNKPLRRIAVFCGLLVLALLIRDNWIQYVQADELRTDKNNRRVTIERYASPRGDIIVDGKPITGSAETSGSDFKFKRTYKNGPMWAPVTGYASQAFGATQLESIEDGILTGNDDRLFFRNTLDMLTGKKQEGGNVVTTLNAAAQKAAYNGLKKQGGKGAVVALEPSTGKILSLASYPSYDPSSFAGNSTTTDTDAWQKLQKKNNPNDPMLNRALRETYPPGSTFKVVTAAAALEDGLYTDPDGKTDSPDPWIMKGTTTKLPNEGNIPCKNATLRVALQYSCNTVFGKIGSDLGNDKMLDMAKKFGFDEEQFTPVRANASVFSDDMNPSETALSSIGQFNTAATPLQMAMVASAVANDGKLMKPYMVEELQARSVDTIERTEPEELSQPLSPENAQKLQSMMETVVDKGTGSNAKIPGVTVGGKTGTAQHGVDNSENPYAWFISYAKGEDGSAPVAVAVVVEDDNAVRDDISGGGLAAPIARNVMEAVLKSKQ
>NZ_CP023694.1|WP_150481931.1|4783007_4785035_-|Stk1-family-PASTA-domain-containing-Ser/Thr-kinase
MEEPRRLGGRYELGQVLGRGGMAEVYLAHDTRLGRTVAVKTLRADLARDPSFQARFRREAQSAASLNHPAIVAVYDTGEDYIDGVSIPYIVMEYVEGSTLRELLHSGRKLLPERSMEMTIGILQGLEYAHRNGIVHRDIKPANVMLTRNGQVKVMDFGIARAMGDSGMTMTQTAAVIGTAQYLSPEQAKGEQVDARSDLYSTGCLLYELLTVRPPFVGDSPVAVAYQHVREEPQAPSVFDPEITPETDAIVLKALVKDPDYRYQSADEMRADIEACLDGQPVAATAAMGAAGYGGYPDDQPTTALRADSGAGATSMLPPMNPDDGGYGYDDRPDRRRQQQRKSNTSTILLVVAGVLVLVGAILIGRWAFSGNGVANDTVAVPNLVGQTLDDAKRLAVNSDLKLSTTEKPCENQSKGKVCDQTPDFPTKVKKNSTVEVVVSTGAPKVSVPSVTGLSLDEAKEKLEDGKYELQVETETRTSPEDPGTVLEQNPTTGEEVEKGSTITLTVAKAEEKATVPDVVGQTCDAAKAQMTANDLTGQCTEQETDDPNQVGKVISTTPQANQQVDKNSSVQIVVGKAKQQQKVKVPEVRLRTLGQAKQILQQNGFTNIQVSGAQDDNAVVTQQDPQPGTEVDNPGGQAITLTTAGGGDSGGGNNGGGNGGGGIFGGTISRNEDG
>NZ_CP023694.1|WP_167537388.1|4782452_4782623_-|hypothetical-protein
MSDYKTIAELRTTQPALSHNYQCFGSQVPENIKVGVRVSLIKSGDKFSGFKYNLTT
>NZ_CP023694.1|WP_150481930.1|4781598_4782351_+|class-E-sortase
MAATTDTDHEEHTGAAASRPSAARRRPGPIAMAVSVFGELLITAGLVLGLFVAYSLWWTNVVADRAAGKQADQVRDDWAHGRGGPGALDTKNGIGFLHVPAMRNDEVLVEKGTSNKILNDGVAGYYTDPVKSALPMSGKAGNFSLAAHRDGHGAAFHNIDKIEKGDPIVFETKDKWYVYKVYGILPETSKYNVKVLSAVPKESGKKKPGHYITLTTCTPVYTSTYRYIVWGELERVEKVDADRTPPEELR
>NZ_CP023694.1|WP_150481929.1|4780355_4781585_+|class-E-sortase
MTALRPERESDTSYGQQSYGAPGAFEDWSGGGAYGASPRPEPQPQPPSQPYMPGPEPQPYAPEPEPFTPETYASGPEPYAAPYEPVPDEPYPPVVDEETVALRIPDPPPAADDPMTGSAGSSATRNDGPAHGGRAARRKASKRRHGRHGGAAETRPAQDSAQDSAPEGRRAPLSRVEARRQARARKPGAAVVASRAIGEVFITTGVLMLLFVTYQLWWTNVRAHAQAGKEASSLQDDWANGKRNPGAFEPGQGFAILHIPKLDVVVPIAEGTNSKGVLDRGMVGHYAEGALKTAMPSDKTGNFGLAGHRNTHGEPFRYINKLTPGDPIVVETQDEYYVYKMASILPVTSPSNTSVLNPVPAGSGFTEPGRYITLTTCTPEFTSKYRMIVWGKMVEERPRSKGKPDALVS
>NZ_CP023694.1|WP_150481928.1|4779720_4780359_+|aminodeoxychorismate/anthranilate-synthase-component-II
MSARILVVDNYDSFVFNLVQYLYQLGAECEVLRNDEVSTAHAQDGFDGVLLSPGPGTPEGAGVCVDMVRHCAATGVPVFGVCLGMQSMQVAYGGVVDRAPELLHGKTSPVEHTSRGVFAGLPSPFTATRYHSLAAEPATVPAELEVTARTHDGIVMGLRHRELPVEGVQFHPESVLTEHGHRMLANWLVECGDEGAVARSAGLAPVVGRATA
>NZ_CP023694.1|WP_167537231.1|4779526_4779724_+|hypothetical-protein
MGLVPWYDGRDGMYGWIWRHLPGSTWVRALISLALVVAVVYVLFQYVFPWAEPLLPFNDVTVDNQ
>NZ_CP023694.1|WP_150481937.1|4791889_4792423_-|helix-turn-helix-transcriptional-regulator
MKRTSFDTWPCSIARTADILGDAWSLLVLREVFYGESRFDGFIGSLGIARNTLTDRLRRLEAEGLLRRRAYQSDPVRHEYLLTDKGRDFFGVLAAINAWGDRWLAGDEGAPVVLHHTPCDHDTEARVVCSSCGEQLRHQDMTASTGPGYPARLLDTPAVRDRFAPGRPLGDARAGQA
>NZ_CP023694.1|WP_150481938.1|4794567_4795908_+|cytochrome-P450
MAQQACPFLAIDPSGQDLYDEIARIRAQGPAVEVELPGGVRAWWINGLELNKRLLAGPETSKDAFQHWPAWINGDISRTWPLAIWVSVRNMVTAYGTDHSRLRKPMSAAFTKRRVDALLPRVQEIVDRALDGLERIPEGEVIDLRAGFAAPIPHEVVCELFGVPPGEDGPRGALYRIINRFFDTAISLEDAQANGVELYGTLTAFLQYKRDHPADDLTTALMAAHDEGSLSEQELMDNLILLLTAGFETTVNLIDNTVHSLLAHPDQLELVRSGQATWEDAIEESLRFEAPGAMSGLRYAVEDIEIEPGLTIPKGDPVVVSFAGAGRDPERHGPDAERFDVTRSTSRDHVSFGHGVHHCLGRPLAMAEATVALTSLFDRFPRLALADPARPPKRLRSIISTGHQELPVLLHGRDGGPVPGPRAEEAEAIRRLSGLGGTSGTRVPRV
>NZ_CP023694.1|WP_150481939.1|4795852_4796788_-|NAD-dependent-epimerase/dehydratase-family-protein
MTVDFLITGGSGFVGSRVAATAHRQPGVRVRHLSRRTPPPGAEPGASVHGDLADPLSLRGTCAGADVLVHCATRVGGDAETVEAVNELGTRALVEEAVRAGVPRIVYLSTAAVYGRGPFRGVRPGEVPIAPASATSRTRAAAERHVLDAGGLVLRPHLVYGEGDRWVVPGLVWLLGELSATLTGCEALQSMIDVDTLGRAVVAAALSPTHDGGVHHVNHPEPVGASDLLGAAGELLGEPGGGAAVDVATALDRAAGKPLALHHLGMLTVDHWFVDDAFWKDLDCSPGEGFAAGFRRAAPWYRSFLRGRKAS
>NZ_CP023694.1|WP_150481940.1|4796784_4797927_-|ScbA-protein
MPQSEPLSAPTDDQTGQGGRPANRSTAAVENAPQATVIDPVDPPEAAAAIEPAQPTEPTSVTKELAHRTVEADVFPTQWRRISDTRFRFTAHWPATHPFFGPVDDHHQDPMIVGETLRQASMVLAHAEFGAPADTHFVMWDLTVHTDPFALLLSDAAEPVDVDVVCSEIRRRGRGLHSMRTTMEFRRAGRFIARGTGSTGCTSPLAYRRLRQKQLAALGTPVPLLPGISPALAGRSRAEDVVLAPSDRPGVWRLRVDTGHPVLFPRPNDHVPGMVLFEAARQAAAAASGRHTFLPRSMTATFARYAELHSPCWIETEVLDENPGIPGDPGDPGDPGDPGDPGDPGDPGETTVRVSGRQDGESVFSATLTCAQPARVRSLS
>NZ_CP023694.1|WP_150481941.1|4798086_4798785_+|TetR-family-transcriptional-regulator
MARQERAIRTRRTILEAAAAVFDERGYTSATIGEILDRAGVTKGALYFHFGSKEELAVGVFEEQLAITLPPQSSKLQELIDSGLVLARRLRSEPLVRASVGLALDQGAMELDRTPAFRMWFDQNVQRLGEAKAQGELLPHVDVAETAELLVGSFSGVQLLSQLRCQRQDLERRVVVMFEHFLPSIAVPAVLARLDISVERAERVLAQVQQRPGRERMETQEGAVPAQVSSGA
>NZ_CP023694.1|WP_150481942.1|4798919_4800353_+|DUF2252-family-protein
MTRDSAGAEGGAVHGETRRLPRVRGFAEWPAEGSPKDEGKALRKRVPRRAHATLDLDASRPDAVSAVEESGRGRLPELTPIRVGRMAATPFAFLRGAAGLMAYDLARTPMTRIKAQICGDAHAANFGLYGDARGGLVIDLNDFDETVLGPWEWDVKRLAASLVLAGREAGADEERCRKAAYDAVGAYRRTMRLLARLPVLDAWNAIADEELVSHTDAHDLLGTLERVSEKARHNTSGRFAARSTEATEDGGRRFVDAPPVLRRVPDAEAAAVAASLEEYVGTLPEDRLPLLARHAVHDVAFRVVGTGSVGTRSYVVLLLDHRGEPLVLQVKEARASALVPHLATAGFDAPVVDHEGRRVVLGQKRMQVVSDILLGWTTVDGHPFQVRQFRNRKGSVDPAALAADQIDDYGRMTGALLARAHAHSADPRLVAGYCGKSEELDEAVADFAVAYADRTEADHADLVAGVRAGKVAAEMGV
>NZ_CP023694.1|WP_150485448.1|4800577_4801336_+|hypothetical-protein
MERAVRAAEQALIEYEIAVETFRVEIENFSRLHEQKLGPLYGRLEELDARILEARAARSGDPEDRRRAEEARARLAPIPGVEELLHGWMDDSGLFPEAVAMLTDQAVRPPQRVRPSEEARKLYRELARKAHPDLAQEEKERERREEFITRVNAAYARGDEAELRELAEEWAKGPELKRGPSRAEELYARLEWLAQRKELLALLAKELEESAIGHMLQLAPDDPDGLLDEIGQQLLTQVTERERELAALLAEG
>NZ_CP023694.1|WP_020273126.1|4801394_4801724_+|rhodanese-like-domain-containing-protein
MPTVEVADLKDGDFLLDVREDDEWKAGHAEGALHIPISDFVARYGELTEAAPQDGRVHVICRSGGRSAQVTMYLAQQGIDAVNVDGGMQVWEAAGRPVVTDDGQPGFVL
>NZ_CP023694.1|WP_150481943.1|4801827_4802961_-|acyl-CoA-dehydrogenase-family-protein
MDFTFTEEQQAAAEAAKGVFAGVAPDAVPSPALTPGAVADACDRALWAKLADADLLSLLLDSRYGGAGLDAIALCLVLRESARVLARVPLLESSAAAAAVQAFGGEEAKSALLPRAGRGELVLTVAAHGRTGHDPAELAVTARQDGAAWVLDGVQTAVPWAYDADVTVVPAHTATGRTVLALVPRGHEGAVLAEQFSTSGERLGELRLESARLAARDVIDAEGAWEWLRDLLATGTCALALGLGERVLRMTGEYTSEREQFGFPIATFQAVAVQAADRYIDLRAMEATLWQAAWRIASGAPGALPAAGDVAVAKIWAAEGVRRVVQTAQHLHGGFGADVDYPLHRYHAWAKHLELSLGPAAAHEEALGDLLAAHPLA
>NZ_CP023694.1|WP_150481944.1|4803392_4804166_+|hypothetical-protein
MDAYDGGSEARHGPGGPDGPGVPAESGGPVEPAPPTEPPAGVAALSLPYRIGVALALAVVAVGVCVHVGMMFLHVAPPNTVTREHGKAVDDWIYPEFEQNWKLFAPNPLQQNISIQVRAEVRDGEGGTLTTGWYDLSAEDGRAIDGNLLPSHTQQNELRRAWDFFLATHDSENRPVGLRGSLSESYLRRIVVLRLDRDDAVRAATGGVGTIERVQVRSRTSNVPPPKWSREKVSTTPAYRELPWWPVPEDEAGGGVR

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Crispr_ID: NZ_CP023694_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_10

5411299-5411397

Orphan

Consensus_repeat	Method
ACGTTGTCGCCGTAGTAGTAGTTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_10

>merge|NZ_CP023694|10|5411299-5411397|CRISPRCasFinder
ACGTTGTCGCCGTAGTAGTAGTTGTCGCCGCTCATTTCGCCATCCCCACGTTGCCGTTGCCGCCGTACATGTTCACGTTGTCGCCGAAGTAGTAGTTGT

>NZ_CP023694|10|9|5411299-5411397|CRISPRCasFinder
ACGTTGTCGCCGTAGTAGTAGTTGT	CGCCGCTCATTTCGCCATCCCCACGTTGCCGTTGCCGCCGTACATGTTC
ACGTTGTCGCCGAAGTAGTAGTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150482390.1\|5409252_5409858_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150482401.1\|5419243_5419549_+\|DUF4229-domain-containing-protein	unknown	unknown	gnl\|CDD\|379415
NZ_CP023694.1\|WP_150482382.1\|5398610_5399900_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|200598
NZ_CP023694.1\|WP_150482391.1\|5409963_5410923_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP023694.1\|WP_150482387.1\|5404322_5405720_-\|acyltransferase-papA2	unknown	unknown	gnl\|CDD\|380462
NZ_CP023694.1\|WP_150482389.1\|5406696_5409201_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256
NZ_CP023694.1\|WP_086841274.1\|5413845_5414748_+\|4-hydroxybenzoate-octaprenyltransferase	unknown	unknown	gnl\|CDD\|183814
NZ_CP023694.1\|WP_150482384.1\|5400627_5401398_+\|cytochrome-c-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
NZ_CP023694.1\|WP_150482398.1\|5416691_5417855_+\|aminofutalosine-synthase-MqnE	unknown	unknown	gnl\|CDD\|213851
NZ_CP023694.1\|WP_150482400.1\|5418615_5419140_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP023694.1\|WP_150482399.1\|5417948_5418599_+\|UdgX-family-uracil-DNA-binding-protein	unknown	unknown	gnl\|CDD\|274850
NZ_CP023694.1\|WP_150482395.1\|5412397_5413849_+\|menaquinone-biosynthesis-decarboxylase	unknown	unknown	gnl\|CDD\|163413
NZ_CP023694.1\|WP_150482383.1\|5399966_5400614_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP023694.1\|WP_150482388.1\|5405880_5406615_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133399
NZ_CP023694.1\|WP_150482396.1\|5414737_5415340_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP023694.1\|WP_086841278.1\|5412026_5412329_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379161
NZ_CP023694.1\|WP_150482397.1\|5415431_5416118_+\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|223241
NZ_CP023694.1\|WP_150482386.1\|5403140_5404220_+\|c-type-cytochrome-biogenesis-protein-CcsB	unknown	unknown	gnl\|CDD\|274447
NZ_CP023694.1\|WP_020270479.1\|5416197_5416653_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|214628
NZ_CP023694.1\|WP_150482385.1\|5401401_5403144_+\|cytochrome-c-biogenesis-protein-ResB	unknown	unknown	gnl\|CDD\|377471

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150482401.1\|5419243_5419549_+\|DUF4229-domain-containing-protein	gnl\|CDD\|379415	pfam14012, DUF4229, Protein of unknown function (DUF4229). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 95 and 122 amino acids in length.	1.80177e-16
NZ_CP023694.1\|WP_150482382.1\|5398610_5399900_+\|hypothetical-protein	gnl\|CDD\|200598	cd10976, CE4_CDA_like_3, Putative catalytic domain of uncharacterized bacterial hypothetical proteins similar to insect chitin deacetylase-like proteins. The family includes many uncharacterized bacterial hypothetical proteins that show high sequence similarity to insect chitin deacetylase-like proteins. Chitin deacetylases (CDAs, EC 3.5.1.41) are secreted metalloproteins belonging to a family of extracellular chitin-modifying enzymes that catalyze the N-deacetylation of chitin, a beta-1,4-linked N-acetylglucosamine polymer, to form chitosan, a polymer of beta-(1,4)-linked d-glucosamine residues.	8.24525e-113
NZ_CP023694.1\|WP_150482391.1\|5409963_5410923_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	1.70746e-06
NZ_CP023694.1\|WP_150482387.1\|5404322_5405720_-\|acyltransferase-papA2	gnl\|CDD\|380462	cd19539, SgcC5_NRPS-like, SgcC5 is a non-ribosomal peptide synthetase (NRPS) condensation enzyme with ester- and amide- bond forming activity and similar C-domains of modular NRPSs. SgcC5 is a free-standing NRPS condensation enzyme (rather than a modular NRPS), which catalyzes the condensation between the SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and (R)-1phenyl-1,2-ethanediol, forming an ester bond, during the synthesis of the chromoprotein enediyne antitumor antibiotic C-1027. It has some acceptor substrate promiscuity as it has been shown to also catalyze the formation of an amide bond between SgcC2-tethered (S)-3-chloro-5-hydroxy-beta-tyrosine and a mimic of the enediyne core acceptor substrate having an amine at its C-2 position. This subfamily also includes similar C-domains of modular NRPSs such as Penicillium chrysogenum N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase PCBAB. Condensation (C) domains of NRPSs normally catalyze peptide bond formation within (usually) large multi-modular enzymatic complexes. NRPS can use a large variety of acyl monomers (approximately 500 different possible monomer substrates as opposed to the 20 standard amino acids in ribosomal protein synthesis) to construct bioactive secondary metabolites of 2 to 18 units long (with various activities such as antibiotic, antifungal, antitumor and immunosuppression). There are various subtypes of C-domains such as the LCL-type which catalyzes peptide bond formation between two L-amino acids, the DCL-type which links an L-amino acid to the D-amino acid at the end of a growing peptide, starter C-domains which acylate the first amino acid with a beta-hydroxy carboxylic acid, and heterocyclization (Cyc) domains which catalyze both peptide bond formation and cyclization of Cys, Ser, or Thr residues. Typically, an NRPS module consists of an adenylation domain, a peptidyl carrier protein (PCP) domain (also known as thiolation (T) domain) and a C-domain. NRPS modules may also include specialized domains such as the terminal-module thioesterase (Te) domain that releases the product via hydrolysis or macrocyclization and any of various C-domain family members such as the epimerization (E) domain, the ester-bond forming C-domain, dual E/C (epimerization and condensation) domains, and the X-domain. C-domains typically have a conserved HHxxxD motif at the active site; mutations in this motif can abolish or diminish condensation activity.	1.5903e-20
NZ_CP023694.1\|WP_150482386.1\|5403140_5404220_+\|c-type-cytochrome-biogenesis-protein-CcsB	gnl\|CDD\|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	1.77547e-98
NZ_CP023694.1\|WP_086841274.1\|5413845_5414748_+\|4-hydroxybenzoate-octaprenyltransferase	gnl\|CDD\|183814	PRK12888, ubiA, 4-hydroxybenzoate octaprenyltransferase.	6.56906e-178
NZ_CP023694.1\|WP_150482384.1\|5400627_5401398_+\|cytochrome-c-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	3.93101e-45
NZ_CP023694.1\|WP_150482398.1\|5416691_5417855_+\|aminofutalosine-synthase-MqnE	gnl\|CDD\|213851	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP023694.1\|WP_150482400.1\|5418615_5419140_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.88198e-10
NZ_CP023694.1\|WP_150482399.1\|5417948_5418599_+\|UdgX-family-uracil-DNA-binding-protein	gnl\|CDD\|274850	TIGR03914, SPO1_DNA_polymerase-related_protein, uracil-DNA glycosylase family domain. This model represents a clade within the uracil-DNA glycosylase superfamily. Among characterized proteins, it most closely resembles the Thermus thermophilus uracil-DNA glycosylase TTUDGA, which acts uracil (deamidated cytosine) in both single-stranded DNA and U/G pairs of double-stranded DNA. This domain may occur either as a stand-alone protein or as the C-terminal domain of a fusion with another domain that always pairs with a particular radical-SAM family protein.	3.0573e-82
NZ_CP023694.1\|WP_150482395.1\|5412397_5413849_+\|menaquinone-biosynthesis-decarboxylase	gnl\|CDD\|163413	TIGR03701, mena_SCO4490, menaquinone biosynthesis decarboxylase, SCO4490 family. Members of this protein family are putative decarboxylases involved in a late stage of the alternative pathway for menaquinone, via futalosine, as in Streptomyces coelicolor and Helicobacter pylori. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP023694.1\|WP_150482383.1\|5399966_5400614_+\|redoxin-domain-containing-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.33577e-44
NZ_CP023694.1\|WP_150482388.1\|5405880_5406615_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133399	cd04772, HTH_TioE_rpt1, First Helix-Turn-Helix DNA binding domain of the regulatory protein TioE. Putative helix-turn-helix (HTH) regulatory protein, TioE, and related proteins. TioE is part of the thiocoraline gene cluster, which is involved in the biosynthesis of the antitumor thiocoraline from the marine actinomycete, Micromonospora. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Proteins in this family are unique within the MerR superfamily in that they are composed of just two adjacent MerR-like N-terminal domains; this CD contains the N-terminal or first repeat (rpt1) of these tandem MerR-like domain proteins.	3.64623e-38
NZ_CP023694.1\|WP_150482396.1\|5414737_5415340_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	9.88456e-19
NZ_CP023694.1\|WP_086841278.1\|5412026_5412329_-\|hypothetical-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	1.49296e-07
NZ_CP023694.1\|WP_150482397.1\|5415431_5416118_+\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|223241	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism].	1.32728e-66
NZ_CP023694.1\|WP_150482389.1\|5406696_5409201_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NZ_CP023694.1\|WP_020270479.1\|5416197_5416653_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|214628	smart00344, HTH_ASNC, helix_turn_helix ASNC type. AsnC: an autogenously regulated activator of asparagine synthetase A transcription in Escherichia coli).	7.18453e-36
NZ_CP023694.1\|WP_150482385.1\|5401401_5403144_+\|cytochrome-c-biogenesis-protein-ResB	gnl\|CDD\|377471	pfam05140, ResB, ResB-like family. This family includes both ResB and cytochrome c biogenesis proteins. Mutations in ResB indicate that they are essential for growth. ResB is predicted to be a transmembrane protein.	0

>NZ_CP023694.1|WP_150482391.1|5409963_5410923_+|helix-turn-helix-domain-containing-protein
MSRRNGGAESGASTAAVFGEVLRHFREAALLTQEGLARQIPCDRSHVARVEAGTRVPQEAFAKKCDELLGTGGVLLRLWGRIDWYPQVEHPDWFRRRAEMDEVAVALREYQERVVPGLLQTADYARALFSRRGADADEVDSRVRVRLSRQQRFLADGGPLYVVILDESCLRNGVGSPEIMREQCAHLLAVGQRRNVRVQVAPSDAFGLVRPRGSMSLIELADERWVYSESLDRGHFNNDPAVYQRHSQTYDVLRADIPSARESAALISDAMEGYEHHGPVRALRGAMDEEQPQRRQRRQLRGNSPRFPRHRPHPRQQEP
>NZ_CP023694.1|WP_150482390.1|5409252_5409858_-|hypothetical-protein
MEPGTLVYDPATGKVGEYQDNTGPYVMLRPAGGGREWQADPARIRVATLEERLRAGVRAANDRSREGLSPDPNRPPVPVSGCAACEELAVRRDQARAAFDGSAVTDANVLLRQHQRKEHGGEPAGRRIFRYVPYSIVQDASALPEYQAYCVSGEVEDCGATSGPRPSPAEVEEWQRRHTQETRHLRYRRSFADYAVLERQG
>NZ_CP023694.1|WP_150482389.1|5406696_5409201_+|excinuclease-ABC-subunit-UvrA
MDNSIRVTGARLHNLRNVSLSLPKNKLVVLTGLSGSGKSTLAFDTLHREGQRQYLESLGMVTGFVSKPAVDSISGLSPSISVDQHLTNRSPRSTVGTVTEVFTYLRLLWSRIGTRPCPGCGKSIPPSYANEAEADTTADDDAEGEQTPCPHCGTLVPELVMGSFSFNKPAGACPSCTGLGEVIRPDVRRLVDGSRSLSQGAVRGWNPKLTEWNLTALRAASRHYGFTFDPDLPVGELGEQQRDLLVYGVESPEFRRHFPSVEAPATVATGRFEGVATALLRRYTERAHDPEYRERAEKQGLVKQPCGECEGTRLRPESRAVTVHGLTIVEAARLPLTELDGWLAALKERSAGDEWLLVEPVVADLEERVRRLVDVGVGYLSLEQSTPSLSAGETQRLRLAALLGSGLTGVLYVLDEPTIGLHPSDTARLIGVLRRLRDLGNTVLVVEHDLDVLRAADHVVDVGPGAGRNGGRIVAAGTPQEVGRAEGSVTGAYLSGRLPAPESRDRGGNGTAVVIRGARAHNLKDVTVRIPLNRLVTVTGPSGSGKSTLLLDILGRAARRHFHGAGELPAEHDGIDGWEHLSKAVLIDQEPISRVPRSNAATYSDVFTPIREVFAASSEGRLTAGRFSFNVPGGRCERCEGAGVLTVRMHFLPAVEVRCPGCRGRRFRPEVLAVRYQGHDIAEVLEATVDEALEVFRDVPAVAGRLRRMADVGLGYLPLGQPAPTLSGGEAQRLKLAKELGRRAADRTLYVLDEPTTGLHAADSARLLDVLQRLVDAGHSVITIEHNVDVMRASDWLIDLGPVGGAGGGRVVAEGTPQEVAAVRASRTGGFLAG
>NZ_CP023694.1|WP_150482388.1|5405880_5406615_-|MerR-family-transcriptional-regulator
MTNERRLRPVDLARLAGVSTQQIRNYEDAGVLPPAARTASGYRVFGDVHRAALLAYRALMRGYGPVKATEIMRSLHDGDVPGALALVDAAHAALHEERVSLRAASQALELLAAQPPAPLPRSGGLRIGEVAALLGVRTSALRVWEGAGLLTPGRERGTGYRVYEPADVRDARLVHTLRRSHYLFDQIRPVLEGLRREGSSEALRAAVAARGEALTARSRAMTGGAAALHAYLEVSAGGPGPSAR
>NZ_CP023694.1|WP_150482387.1|5404322_5405720_-|acyltransferase-papA2
MRMTDIQRCEVRPGRLFEWTLSPATVATAKALPEDSRPPAYIQESHIRTARSVREDGLFVPTWLGAAFDIPGRADLDALGEALRSWTLRHETLRSGFRWAGGPGDSIRRFTLDPSSVSLHREDVGDFDDAAALAQHLQDRFDTTADALRWPNLIYTAVVRDDCTSVYMAFDHSNVDAYSIHRIPAEIHELYEAGVAGRAEGPEPVSSYVDFCEAERADADRIDADHDIVSRWREFIRRCGGRLPSFPVDLGVDPGGELPTQKFMREMMVDADAAAAFESYCRPYGGSLVGVLAATALIVHEIGGEPVYRTVVPFHTRVKSQWSQSVGWYVGGAPIEIPMSEATDFPSVLRTVRAALQANRRLARIPLARVLHLLGTDFRPTSPDLYSIVSFVDTRGIPGSDDWADRKAYGLLRVSYGDQVCAWITRLHEGLWFAGRYPDTDVAHKNMRLYAERLGDLITSVADPA
>NZ_CP023694.1|WP_150482386.1|5403140_5404220_+|c-type-cytochrome-biogenesis-protein-CcsB
MTLAAATNENLANISNVLIYSAMAVYTLAFFAYIAEWLFGSRSKVARTAAALTSEPEAKKAPAVTVNKAGGTAVLERPKVTVRAASGQRDVPDGPGAHGGDEQGDLYGRIAISLTVLAFLIELGGVVARAASVERAPWGNMYEFNITFSTVAVGVYLGLLALKKNVRWLGLFLITSVLLDLGLAVTVLYTASDQLVPALHSYWLYIHVSTAIFCGAVFYVGAVGTILYLFKDSYENKLASGGTPGTFATSVLERLPSSASLDKFSYRVNAAVFPLWTFTIIAGAIWAGDAWGRYWGWDPKETWSFITWVAYACYLHARATAGWKGRKAAYLALVAFGCWLFNYYGVNIFVSGKHSYAGV
>NZ_CP023694.1|WP_150482385.1|5401401_5403144_+|cytochrome-c-biogenesis-protein-ResB
MSKTTASDPAPTAAENQELGDAGSQLSTAPTEDAPNLPSLGVIGWARWFWRQLTSMRVALLLLLLLSLGAIPGSLIPQSGQDETKVADFRKANPTLGDVYDKLGLFHVYSSVWFSAVYILLFISLIGCIVPRTWQFVGQLRGRPPRAPSRLNRLPAHTTWRTTAEPEQIHSAALALLKKRRFRAHLAGDAVAAEKGYLRELGNLVFHIALIVLLIAFAWGQLYKSEGNKLIVEGDGFSNTLTQYDDFKSGNLFTSDDLVPFSFNLKKFTGTYERSGPNKGTPRVYQADLTYSDGPYGKDQKTTVKVNHPLEIGDSKVYLVSHGYAPVITVRDAKGNVVFDDAVPLLPLDANVTSSGVVKVLDGYRNAEGKKEQLGFNAFFVPTFGGSASGTMLSQFPALDSPVLALSAYHGDLGADSGIPQSVYQMDKTNMKEFKDSQGKLFKKLLKPGETMTLPNGAGSVTFGKDIKEWAGFQVVQEPGGGWALAGALAAIGGLAASLFIQRRRVWVRAVKGADGVTVVEMAGLGRSESAKVPEELGDLAGILYDEAPAASGPDDPADSPDTDQEPGTETPVPAEGAEK
>NZ_CP023694.1|WP_150482384.1|5400627_5401398_+|cytochrome-c-biogenesis-protein-CcdA
MSALTLAAVADPNGTVLNGALLVALPIALLGGLVSFFSPCVLPLVPGYLSYVTGVAGTDLAEARRGRMVAGASLFVLGFTAVFVSSGALFGYFGDTLQEHKDVLSKVLGVLMILMGVFFMGLMPWFTQREFRLHRKPVAGLVGAPLLGALFGIGWTPCIGPTLASVLALSSDQGSAGRGAALTVAYCLGLGVPFVLAAVAFRKALGAFGWIKRHYVWVMRIGGTMMIVTGLLLLTGAWDRIVQEMQVWSDGFTVGI
>NZ_CP023694.1|WP_150482383.1|5399966_5400614_+|redoxin-domain-containing-protein
MSAASRAPLRSNRSTRATRSTRVRRRAALTAGAAVAALLVTGCGSGGTSGGGGNTNFVTGTDGIATAAKGERAPAPDLSGKTIAGKTLDVADYKGKVVVLNVWGSWCNPCRAEAKYFAKVSKAYAGKGVQFVGINTRDTSTGAALAFEKDWDITYPSLYDPTGKLLLRFGRGTLNPQAIPSTLILDRDGKIAARSLSALSEERLLKMLKPVVAEK
>NZ_CP023694.1|WP_150482382.1|5398610_5399900_+|hypothetical-protein
MRPHSRRGMLGIGAGAAAAVSLAGCGGLTGSDDSSHADGSGDSAQGGSKPKPTARPIGDGSTAYTGKQPHQPGRPEPLEPGQTPPQFVVFSWDGAGEVGNGLFARFLDLAKEHGASMTFFLSGLYLLPESKKRLYDPPNNPRGASDIGYLTDAHIKDTLKNVRRAWLEGHEIGTHFNGHFCGEAHGSVKNWTPRQWRSEIDQAKSFVKQWRTNTGWRDLPSLPFDYDKELVGGRTPCLLGQDNLLPTARELGWRYDASSPGGRQVWPVKRQGLWDLPLQQIPFPGRGFEVLSMDYNMLANQSISTTKAPAHNYPGWREQSAQAYIQGFKRAYETNRAPLFIGNHFEQWNGGIYMDAVEEAFKHIAREKEKGADVRLVSFRQFVDWLDVQKPEVLDKLRTLDVGQQPAGGWKGFAEKTPGGAGTPSRNAA
>NZ_CP023694.1|WP_086841278.1|5412026_5412329_-|hypothetical-protein
MLRVLMFLVPLALSVYAFIDCISTKDDDIRHMPKPLWAILVLLFPLVGSISWLIAGKKRSAVAGGGRPRPRQWVAPDDNPDFLKSLDEEKRDDDPKRDES
>NZ_CP023694.1|WP_150482395.1|5412397_5413849_+|menaquinone-biosynthesis-decarboxylase
MAYDDLRSLLRALEREGDLKRIKAEVDPYLEVGEIVDRVQKAGGPALLFENVRGSGMPLAMNVYGTDRRLLKALGLKSYAEISERIGGLLKPELPHGFVGVREAFGKLGAMTHVPPKKVKDGPVQEVVLTGDDVDLEQLPALFTWPKDGGSFFNLGLTHTKDPESGIRNLGLYRLQRHDKRTIGMHWQIHKDSRNHYQVAARRGERLPVAIAFGCPPAVTYASTAPLPGDIDEYLFAGFLAGKRIEMVDCKTVPLQVPAQAEVVIEGWLEPGEMLPEGPFGDHTGFYTPQEPFPALKIDCVTMRKRPLLQSIVVGRPPTEDGPLGRATERFFLPLLKIIVPDIVDYHLPEAGGFHNCAIVSIDKKYPKHAQKVMHAIWGAHMMSLTKLIVVVDSDCDVHDLHEVAWRALGNTDYARDLSVVEGPVDHLDHASYQQFWGGKAGIDATKKWPEEGYTRDGGWPDMVESDPETAAKVDRRWKEYGL
>NZ_CP023694.1|WP_086841274.1|5413845_5414748_+|4-hydroxybenzoate-octaprenyltransferase
MTSASAAIPQPGRTKAFLRLVMIEHSVFALPFAYIATLTAMYQWDKNVHWGRLLLVTVCMVGLRTFAMAVNRIIDREIDARNPRTAHRELVTGAMSVRHAWTGALIALVVFLGAAALLNPLCLALAPIAVIPMVVYPYGKRFTNFPQAILGLAQAMGPVGGWLAVTGSWSWDAVILGLAVGIWIGGFDLIYACQDVETDREIGVMSVPARFGIPAAIWGARVCHTLTTALFVWYALATDAGAFFWLGLLIVAAAFLYEHTIVRPHDLSRVNRAFFSVNGFIGIALFVCALLDLLVRGLTV
>NZ_CP023694.1|WP_150482396.1|5414737_5415340_-|rhomboid-family-intramembrane-serine-protease
MSGVGAGWSRGDRAMAAGKLMLAWVALLWLLEVVDVASGHALDGLGVTPRTPSELVDVVPSAFIHFGFAHLAANTVPLLVLGFLAALAGLRRFLLVCALIVLVDGLGVWLIAPAHTNTAGASGLIFGLFGFLLVSGFVERRPWGVLAGILIAAIWGGSILAGLAPTQTGVSWQGHLLGLLAGVAAAFVFRRRATPPALTP
>NZ_CP023694.1|WP_150482397.1|5415431_5416118_+|UbiX-family-flavin-prenyltransferase
MNPVKPGETPRTPWIVGVSGASGTPYAAAVLRALLAAGESVDLVVSRASRLTLLDETGISFRDAHWQDDLREWLSRGADGKPDTFSVDIDAVRHWSAGDLAAGPSSGSYPTKGMLIVPASTASVAGVALGLSKDLLQRAASVTLKEGRKLIVAVRETPLNGQTLRHLVTLDDAGATVVPASPAFYAGATHIQDLVDFVAGRVLDSASVPHGLYRRWQGELGGGSHRAG
>NZ_CP023694.1|WP_020270479.1|5416197_5416653_+|Lrp/AsnC-family-transcriptional-regulator
MDAVDRQLIQALRENGRASYAELGRLVGLSGPSVTDRINRLEAAGVITGYRATVDAASLGLGVTALIGISLSDATDHEDVAQRLRDLSEIEDCWFIAGDDSYMLKVRAENVDGLEKIIRRLSGTKGVSRTRTTIVLSTKWENRVGELPEEV
>NZ_CP023694.1|WP_150482398.1|5416691_5417855_+|aminofutalosine-synthase-MqnE
MDVGLKRELEEKVRSGERLTREDGIALYESDDLAWLGGLAHEVRTRKNGDVVHFNVNRHLNMTNVCTASCAYCSFQRKPGEKDAYTMRIEEAVKLAKAMEGENLTELHIVNGLHPNLPWRYYPRSLRELKAALPHVSLKAFTATEIHHFETISGMSASEILDELIDAGLESLTGGGAEIFDWEVRQHIVDHRTHWEDWSRIHRLAHEKGLKTPATMLYGHIEEPRHRVDHVLRLRELQDETGGFQVFIPLRYQHDFVDVQDGKVRNRLQARTQMATGAEALKTFAVSRLLFDNVPHVKVFWVMHGVQTAQLALQHGADDMDGSVVEYKITHDADNFGTPNKLTREDLLDLIRDAGFRPVERNTRYEIIREYDGPDPELREAPQPMRV
>NZ_CP023694.1|WP_150482399.1|5417948_5418599_+|UdgX-family-uracil-DNA-binding-protein
MVATKAPEDAYTAEPFVPGRGGLTALRRAAAECRGCPLHRDATQTVFGDGNKDARVMLVGEQPGDQEDRQGKPFVGPAGRLLDRALEEAGIDPSEAYVTNAVKHFKFTQAEPRKRRIHKAPTLREMTACGPWLAAELAVVEPELIVVLGATAGKALLGSSFRVTQVRGTVLEEEIHGRPERLVPTVHPSSVLRADDREAAYRGLLSDLKVAAQVLA
>NZ_CP023694.1|WP_150482400.1|5418615_5419140_+|GNAT-family-N-acetyltransferase
MPLTFTLDPAVTPDLRDGILDLWADVSNAGGAVGFVPPVTREDIRPSLVQHFALMAEGRVRLLVGHDEEGRVAATAFLTFNTHHLMTHWLWLYTVMVHPRHQGKGYGRDLLAAAADAARGLDGIETIRLTCRGGVGLERFYESCGYKEVGRVPGAIRVAPGDDRDDVIMLLPLA
>NZ_CP023694.1|WP_150482401.1|5419243_5419549_+|DUF4229-domain-containing-protein
MLRYTLMRLGIFAGCLVVVWGLVYSGLAPRGLGASNGLWIVMLALLFSAPISFVVLRKERDRASVQIVQRVDRMKASMEANRSQEDDADDTSRAQGQTQAS

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Crispr_ID: NZ_CP023694_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_11

6598001-6598171

Orphan

Consensus_repeat	Method
GGAGCCGTTGTCCTGGCGCGGTGCGGGGTACTGACCGGTCGAGCCGTTGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP023694_11

>merge|NZ_CP023694|11|6598001-6598171|CRISPRCasFinder
GGAGCCGTTGTCCTGGCGCGGTGCGGGGTACTGACCGGTCGAGCCGTTGTCGTAGGACTGCGGAGACGGGTACTGGCCCGTGGAGCCGTTGTCCTGGCGCGGCGCGGGGTACTGACCGGTCGAGCCGTTGTCCTGCCGGGGCGCCGGGTACTGGCCCGTGGAGCCGTTGTC

>NZ_CP023694|11|10|6598001-6598171|CRISPRCasFinder
GGAGCCGTTGTCCTGGCGCGGTGCGGGGTACTGACCGGTCGAGCCGTTGTC	GTAGGACTGCGGAGACGGGTACTGGCCCGTGGAGCCGTTGTCCTGGCGCGGCGCGGGGTACTGACCGGT
CGAGCCGTTGTCCTGCCGGGGCGCCGGGTACTGGCCCGTGGAGCCGTTGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150483225.1\|6604531_6604966_-\|lasso-peptide-biosynthesis-B2-protein	unknown	unknown	gnl\|CDD\|379206
NZ_CP023694.1\|WP_029181510.1\|6596965_6597379_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422
NZ_CP023694.1\|WP_150483219.1\|6585764_6588143_+\|polysaccharide-lyase-8-family-protein	unknown	unknown	gnl\|CDD\|238517
NZ_CP023694.1\|WP_020270051.1\|6608851_6609568_-\|IclR-family-transcriptional-regulator-NdgR	unknown	unknown	gnl\|CDD\|224332
NZ_CP023694.1\|WP_053668780.1\|6596458_6596854_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023694.1\|WP_150483226.1\|6605200_6607030_-\|asparagine-synthase	unknown	unknown	gnl\|CDD\|238949
NZ_CP023694.1\|WP_150485573.1\|6607036_6607138_-\|lasso-RiPP-family-leader-peptide-containing-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_020271460.1\|6589916_6590111_+\|acyl-CoA-carboxylase-subunit-epsilon	unknown	unknown	gnl\|CDD\|379386
NZ_CP023694.1\|WP_150483224.1\|6602959_6604444_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP023694.1\|WP_167537232.1\|6601826_6602018_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_150483228.1\|6609765_6611196_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP023694.1\|WP_150483220.1\|6588297_6589881_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|130187
NZ_CP023694.1\|WP_003993187.1\|6595902_6596478_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023694.1\|WP_167537453.1\|6604962_6605223_-\|lasso-peptide-biosynthesis-PqqD-family-chaperone	unknown	unknown	gnl\|CDD\|377508
NZ_CP023694.1\|WP_150483227.1\|6607363_6608095_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP023694.1\|WP_167537452.1\|6592188_6595524_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377989
NZ_CP023694.1\|WP_086840352.1\|6591085_6591670_-\|DUF742-domain-containing-protein	unknown	unknown	gnl\|CDD\|283084
NZ_CP023694.1\|WP_014675207.1\|6590523_6591105_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP023694.1\|WP_150483223.1\|6602190_6602967_+\|DUF2437-domain-containing-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP023694.1\|WP_004983065.1\|6591764_6592178_-\|roadblock/LC7-domain-containing-protein	unknown	unknown	gnl\|CDD\|367422

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150483225.1\|6604531_6604966_-\|lasso-peptide-biosynthesis-B2-protein	gnl\|CDD\|379206	pfam13471, Transglut_core3, Transglutaminase-like superfamily. This family includes uncharacterized proteins that are related to the transglutaminase like domain pfam01841.	7.28377e-23
NZ_CP023694.1\|WP_029181510.1\|6596965_6597379_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	4.59925e-22
NZ_CP023694.1\|WP_150483219.1\|6585764_6588143_+\|polysaccharide-lyase-8-family-protein	gnl\|CDD\|238517	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase.	0
NZ_CP023694.1\|WP_020270051.1\|6608851_6609568_-\|IclR-family-transcriptional-regulator-NdgR	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.58543e-45
NZ_CP023694.1\|WP_053668780.1\|6596458_6596854_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	6.25224e-40
NZ_CP023694.1\|WP_150483226.1\|6605200_6607030_-\|asparagine-synthase	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	2.93769e-20
NZ_CP023694.1\|WP_020271460.1\|6589916_6590111_+\|acyl-CoA-carboxylase-subunit-epsilon	gnl\|CDD\|379386	pfam13822, ACC_epsilon, Acyl-CoA carboxylase epsilon subunit. This family includes the epsilon subunits of propionyl-CoA carboxylase, EC:6.4.1.3, and acetyl-CoA carboxylase, EC:6.4.1.2. These enzymes are involved in the biosynthesis of long-chain fatty acids. The epsilon subunit is necessary for an efficient interaction between the alpha and beta subunits of these enzymes.	3.26106e-09
NZ_CP023694.1\|WP_150483224.1\|6602959_6604444_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP023694.1\|WP_150483228.1\|6609765_6611196_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP023694.1\|WP_150483220.1\|6588297_6589881_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|130187	TIGR01117, methylmalonyl-CoA_decarboxylase_alpha-subunit, methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane. [Energy metabolism, ATP-proton motive force interconversion, Energy metabolism, Fermentation, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP023694.1\|WP_003993187.1\|6595902_6596478_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	1.28637e-45
NZ_CP023694.1\|WP_167537453.1\|6604962_6605223_-\|lasso-peptide-biosynthesis-PqqD-family-chaperone	gnl\|CDD\|377508	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD). This family contains several bacterial coenzyme PQQ synthesis protein D (PqqD) sequences. This protein is required for coenzyme pyrrolo-quinoline-quinone (PQQ) biosynthesis.	2.80288e-17
NZ_CP023694.1\|WP_150483227.1\|6607363_6608095_+\|HAD-IA-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	2.10645e-35
NZ_CP023694.1\|WP_167537452.1\|6592188_6595524_-\|HAMP-domain-containing-protein	gnl\|CDD\|377989	pfam08376, NIT, Nitrate and nitrite sensing. The nitrate- and nitrite sensing domain (NIT) is found in receptor components of signal transducing pathways in bacteria which control gene expression, cellular motility and enzyme activity in response to nitrate and nitrite concentrations. The NIT domain is predicted to be all alpha-helical in structure.	2.76917e-24
NZ_CP023694.1\|WP_086840352.1\|6591085_6591670_-\|DUF742-domain-containing-protein	gnl\|CDD\|283084	pfam05331, DUF742, Protein of unknown function (DUF742). This family consists of several uncharacterized Streptomyces proteins as well as one from Mycobacterium tuberculosis. The function of these proteins is unknown.	7.95496e-46
NZ_CP023694.1\|WP_014675207.1\|6590523_6591105_-\|ATP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	9.53784e-46
NZ_CP023694.1\|WP_150483223.1\|6602190_6602967_+\|DUF2437-domain-containing-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.90447e-100
NZ_CP023694.1\|WP_004983065.1\|6591764_6592178_-\|roadblock/LC7-domain-containing-protein	gnl\|CDD\|367422	pfam03259, Robl_LC7, Roadblock/LC7 domain. This family includes proteins that are about 100 amino acids long and have been shown to be related. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. It is proposed that roadblock/LC7 family members may modulate specific dynein functions. This family also includes Golgi-associated MP1 adapter protein and MglB from Myxococcus xanthus, a protein involved in gliding motility. However the family also includes members from non-motile bacteria such as Streptomyces coelicolor, suggesting that the protein may play a structural or regulatory role.	1.51599e-22

>NZ_CP023694.1|WP_029181510.1|6596965_6597379_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLALSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGDVAQTVVEMERGFMFLMSISDGSSLAVLAHPDCDIGLVGYEMALLVDRAGAVLTPDLRAELQGSLLH
>NZ_CP023694.1|WP_053668780.1|6596458_6596854_-|DUF742-domain-containing-protein
MTPPPASHDPYAEPYEDEGDQPLVRPYAMTGGRTRPRYQLAIEALISTTADPAALMGLLPEHQRICHLCREVKSVAEVSALLNMPLGVARILVADLAEAGLVAIHQPGGDDATGAPDVTLLERVLSGLRKL
>NZ_CP023694.1|WP_003993187.1|6595902_6596478_-|ATP-binding-protein
MDFASSDAGRSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKTTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAVVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGQQPYTPDEVREALQIGPDAPIITTDARHRADAKSALITLVEHALMARLR
>NZ_CP023694.1|WP_167537452.1|6592188_6595524_-|HAMP-domain-containing-protein
MRRSKNSPEPSARGNFTPPPRTAAPAPVPGSEPSAAPAESGGRLSPRNWRVATRLNAILLIPVLVGLVMGGFQVKSSIDTWQEAEDAENTARLVRASLLYANALYNERDTSAAPLLKGSAQTSQDKATVTQVRKTTDEAADAFDAAAQNMPAKPGLERRLDLFRKAEPKLQTLRQVAYTSKLKGVQTEEGYVEIAHPLTEFANELGLGTGNITSYGRTVYAIELTKAASSLQRSIGMHILTKPGPDDGNLASQRIALSSYAYLERIAVQEYIGGGTEQDAAKLRAAEAKLKTDGAAMAREAKAKDPDYVPPPSKPETMVAAIATLQTTDPSARAALAEQGITADNWWAVNTLKFNAYEKIETDLADKAVSEASDIADDAQRDAYITGAAVVVALLLAFILAGAVARQMSRSMRQLRNAAFGIAEQRLPMLVDQLSRTDPGRVDTRVQAIPITTTDEIGEVARAFDQVHREAVRLAAEQALLRGNINAIFTNLSRRNQSLIEGQLTLITDLENNEADPDQLENLFRLDHLATRMRRNGENLLVLAGEEPGRRWDQPVPLVDVLRAASSEVEQYERIELSGVPEAEIHGRAVTDLVHLLAELLENATTFSSPQTKVRVTATRLPDGRVMIEIHDKGIGLTAEDFADINHKLANPPTVDAAISQRMGLFVVGRLSDRHGIRVQLRPSGEQAGTTSLVMLPDAITHGGGGEQHVDRDEFTVSQIIPEQNFGGENFNQQPMRTAAELGFDDSRYSDVPDDIRELDPVGRSLMREERRAALEAQSTQHPELPGRQSNQEPTEAPGYPDEYNGQQGYDAGQAYDTGQTGYPEQQPSAYDRQAPYEEQQASYQEQQASYEQQRQTAYEEPQRGAYDEQYYAPNGGLPQNDTFSPNGGYPDPSYAEPAQEEPPAQGAGAPGSFAAFEQRRYQDDWPQQDGYQNGYPSQYPSEAQETESAQAADASEQDRVGFDRPGQAQAAAPSLTDAGLPRRGSAASGANGTGGARHASQEPPASTPESNGDRDWRSANDERWQQASQLRKPKAGGVTSSGLPRRVPKANLIEGSAESTPQGGPQVSRAPEDVRGRLSNLRRGVQRGRSAGSETNGQGFGPDSTYNQER
>NZ_CP023694.1|WP_004983065.1|6591764_6592178_-|roadblock/LC7-domain-containing-protein
MSQAAQNLNWLITNFVDNTPGVSHTVVVSADGLLLAMSEGFPRDRADQLAAVASGLTSLTAGASRIFEGGSVNQTVVEMERGFLFIMSISDGSSLAVLAHPEADIGLIGYEMALLVDRAGTVLTPDLRAELQGSLLN
>NZ_CP023694.1|WP_086840352.1|6591085_6591670_-|DUF742-domain-containing-protein
MATPPGGSSSGNWSYGPAQGQGDGGQNPNRYNFPSAPSHRQPYAPQGPGPSPYDQPPAPRIQPVQPQRRTPEPSPGGASNNHNPLVRPYAMTGGRTRPRYQLAIEALVHTTAQPHQMQGQLPEHQRICNLCREIKSVAEISALLTIPLGVARILVADLAEAGLVAIHQPGGDENAGGQPDVTLLERVLSGLRKL
>NZ_CP023694.1|WP_014675207.1|6590523_6591105_-|ATP-binding-protein
MDFASSSGGPSRSTTSAKIVVAGGFGVGKTTFVGAVSEINPLRTEAVMTSASAGIDDLTHTGDKTTTTVAMDFGRITLDQDLILYLFGTPGQDRFWFMWDDLVRGAIGAIVLVDTRRLADCFPAVDYFENSGLPFVIALNGFDGQQPYTPDEVREALQIGPDTPIITTDARHRADAKSALITLVEHALMARLR
>NZ_CP023694.1|WP_020271460.1|6589916_6590111_+|acyl-CoA-carboxylase-subunit-epsilon
MDTPDIRVEKGHAEPEEVAAITAILLARAAARPTDPTPTHRGRVKAGWRRLEREPGFRAPHSWR
>NZ_CP023694.1|WP_150483220.1|6588297_6589881_+|acyl-CoA-carboxylase-subunit-beta
MTVLDEAPGEPTDARGRVAELHEIRAQAVAGPSEKATEAQHAKGKLTARERIELLLDPDSFREVEQLRRHRATGFGLEAKKPYTDGVITGWGTVEGRTVFVYAHDFRIFGGALGEAHATKIHKIMDMAIAAGAPLVSLNDGAGARIQEGVSALAGYGGIFQRNTRASGVIPQISVMLGPCAGGAAYSPALTDFVFMVRDTSQMFITGPDVVKAVTGEEITQNGLGGADVHAETSGVCHFAYDDEETCIAEVRYLLSLLPQNNRENPPRAESEDAVDRRSDVLLDLVPADGNRPYDMTKVIEEIVDDGDYLEVHERWARNIICALGRMDGQVVGIVANQPQVLAGVLDIEASEKAARFVQMCDAFNIPIVTLLDVPGFLPGVDQEHGGIIRHGAKLLYAYCNATVPRISLILRKAYGGAYIVMDSQSIGADLTYAWPTNEIAVMGAEGAANVIFRRQIAEAEDPEAMRTRMVKEYKSELMHPYYAAERGLVDDVIDPAETREVLIKSLAMLHTKHADLPSRKHGNPPQ
>NZ_CP023694.1|WP_150483219.1|6585764_6588143_+|polysaccharide-lyase-8-family-protein
MTPQRRVFFRRTAKAAALPHPGRRALLLAAAALAATGGATPTPRDADARDADTDPYDTLRRRWLGIALGTGYDPAAQPYASRLAETGELARGLHSTMAPAADSLWPGHPFDPPAGITMSYRRLWTMTQAYVQQGTGSTADPDLLAGILRGLDHLSATVYNPATTRYGNWWEWQIGSPRLLMDIATALYEHLGDDRIRAACAAVDHFVPASALGDYSGTSTGANRVDLCRSVALRGILGRAPDKIALARDALSPVFPYVTRGDGLYADGSFVQHTWVAYSGTYGQVVLDGLGRLFALLAGSDWEVTDPNRQIVLDSVEHAYAPLIHDGLVMDSVNGRAISRGLLTADDRQVMRGDHFHGRQLIAAIALLAAGASQAERDRWHARIKGWIERDTVSPILTARQFGVADLARLHAIAASPLPAAPEPTGHRLFAAMDRAVHRRPGFTVNIAMASDRIAHYECGNGENPRGWHTGAGMVSWWAGASDQYTDWFWPTVDWYRLPGTTVSTKRLADREGGEWGTARPDARWVGGTTDGEYAAIGQHLKGLGSTLQARKSWFCVADAVICLGAGISCSDGVPVETIVDNRNLGASGTQRFVKGPNWAHLEDHGGWVLLGREPKALREDRTGAWSDINTGSTPERRTRRWQTLWLDHGTDPEDATYAYVLMPGASRRAVARRAVDRHWMSVLANDAGRQAVDVPSLGLTAANFWQAGTAGPLTASAGASVLTVRRGRTATLCLSEPPRTGEPLEITWNRPVRRVRHADDTVEVLSTGPRLRLRVTPGKACATHVCEMTLG
>NZ_CP023694.1|WP_167537232.1|6601826_6602018_+|hypothetical-protein
MKTTTMFHKIANPRRTTLAHLDDADELQTPELPEHRVELPTQTANPKRTILTEVPVAAAAAAE
>NZ_CP023694.1|WP_150483223.1|6602190_6602967_+|DUF2437-domain-containing-protein
MRIARFSIDGNVAFGAIEGEKQDELVLDIIKGIPFADFELSGTKVPVGKVRLLPPVLPNKVVAFGRNYAEHAKELGNEVPQAPFAFFKPSTSVIGPGDEIQYPSFSEEVHHEAELAVVIGRMCREVPRERVKDVIFGYTCANDITARDVQKREKQWARAKGFDTSCPLGPWVETDLDPGDLTIQLTVNGQQRQLGRTSEMVHSIEDLIVNISEAMTLLPGDVILTGTPAGVGPLNVGDEVAVTIEGIGTLTNKVVKRG
>NZ_CP023694.1|WP_150483224.1|6602959_6604444_+|glutamate--tRNA-ligase
MASAPGTPVRVRFCPSPTGNPHVGLVRTALFNWAFAKHHQGTLVFRIEDTDAARDSEESYTQLLDSMRWLGFDWDEGPEVGGPHAPYRQSQRMDLYKDVAAKLLDAGHAYRCYCSQEELDTRREAARAAGKPSGYDGHCRELTDAQVAEFKAQGREPIVRFRMPDETITFTDLVRGELTFTPENVPDYGIVRANGAPLYTLVNPVDDALMEITHVLRGEDLLSSTPRQIALYKALIELGVAQQIPSFGHLPYVMGEGNKKLSKRDPQSSLNLYRERGFLPEGLLNYLSLLGWSLSADQDVFTIDEMIAAFDIADVNPNPARFDLKKCEAINGDHIRMLDVKDFTERCRPWLQAPFAPWAPEAFDEAKWQAVAPHAQTRLKVLSEITDNVDFLFLPEPVEDEASWTKAMKEGSDALLRTAREKLEAADWTSAESLKEAVLAAGEAHGLKLGKAQAPVRVAVTGRTVGLPLFESLEVLGKEKTLARIDAALARLTA
>NZ_CP023694.1|WP_150483225.1|6604531_6604966_-|lasso-peptide-biosynthesis-B2-protein
MSVPVTLTEQRRLPPHRRALPLLAVALARPLADIRPARLRRVLELARRGAKPATVGQALAAREAVVSVSLRCAGQHCLQRSIATALLCRFRGVWPTWCTGVRTQPFAAHAWVEAEDQLIGESYPKGHYKPLLTIGPAPRKHPDH
>NZ_CP023694.1|WP_167537453.1|6604962_6605223_-|lasso-peptide-biosynthesis-PqqD-family-chaperone
MPLHLHPDVVTTETDDGTVLLQLHTGRYWQLNTTGTSVLRRLLDGCAPDDIAAELARRHEIPPEQAEQDVQAILARLSSAGLVVAS
>NZ_CP023694.1|WP_150483226.1|6605200_6607030_-|asparagine-synthase
MPAFVILPDTTAAAVMRTRMSFASPQVVSHVSGRPWLVGSWSDDRITVATAGPVRVAVIGDCPISQERLTELTAAVTTVADVDKLASALPGSAHLMASVDGQVRAQGSISGLSRIFYTRIDGVHVASDRAHVLAEMVGAVVDEQSLAVRLASGLALAPPLSERCLWAGISSLAPERCLVWTRDQADEKVWWNPPAPHLSLRDGAAGVREALTGAVQDRAPAQGRVSADLSGGMDSTSLCFLAARHTPALLTLRWAEADAANDDADFAGQAIQALDRAEHLVVAQRELPSIFDTESIPVDAEQPMLTMRAAARLRHNAQLLAQRGSRRHLAGHGGDELFQPSPGYLAPLLRHHPVLALRRLRQNRALKRWSLRPALTGLLRPGTVAGWWHDQADNLHTVRPQRAPAMGWGLHAVQAQSWMTPAGVDLIRQALRLTAHQAQPLSDDLGQHQTLLAVRTTAAHYRLMARIYADVGVNLDLPYYDQRVLEAVLRVRPHEHADPRRYKPLLAEAMRGIVPPAILGRATKGEFGLDLRQGLADNLPSILNLFADSALAQRGLIDADTLRNRLLAPQRDLSMVFALEALLGCELWLRTAARPARQPREHDAPAPAP
>NZ_CP023694.1|WP_150485573.1|6607036_6607138_-|lasso-RiPP-family-leader-peptide-containing-protein
MYVPPMLVEVGEFSEDTLGFGGWRLDSIFGIYT
>NZ_CP023694.1|WP_150483227.1|6607363_6608095_+|HAD-IA-family-hydrolase
MSIRAVVWDVDDTLFDYTTADRLGMRTHLTAEGLLDDYDTVEQAITRWREITDAQWARFAAGEATFEDQRRDRVRVFLGQDLTDAEADAWFRRYRAHYEAVWALFPDVLPVLDALAASHRHAVLSNSSIHVQDRKLRVLGVHDRFESILCAAELGVSKPEAGAFLAACAALDLSPHQVAYVGDHPEIDGRGAADAGLLSVWIDRGGAYATIDPPVGPHRIASLAELPSLLGSDSRFGAPSTFR
>NZ_CP023694.1|WP_020270051.1|6608851_6609568_-|IclR-family-transcriptional-regulator-NdgR
MDNSSGVGVLDKAALVLSALESGPATLAGLVGATGLARPTAHRLAVALEHHRMVARDMQGRFILGPRLAELAAAAGEDRLLATAGPVLTHLRDVTGESAQLYRRQGDMRICVAAAERLSGLRDTVPVGSTLTMKAGSSAQILMAWEEPERLHRGLQGARFTATALSGVRRRGWAQSIGEREPGVASVSAPVRGPSNRVVAAVSVSGPIERLTRHPGRMHAQAVIDAAGRLSEALRRTG
>NZ_CP023694.1|WP_150483228.1|6609765_6611196_+|3-isopropylmalate-dehydratase-large-subunit
MGRTLAEKVWDDHVVRRAEGEPDLLFIDLHLLHEVTSPQAFDGLRKSGRKVRRLDLTIATEDHNTPTLDIDKPIADPVSRIQLETLRKNAADFGVRLHPLGDVEQGVVHVVGPQLGLTQPGTTVVCGDSHTSTHGAFGALAFGIGTSQVEHVLATQTLPMSRPKTMAITVDGELPEGVTAKDLILAIIARIGTGGGQGYVLEYRGEAIEKLSMEARMTICNMSIEAGARAGMIAPDETTFAYLKGRPHAPEGAEWDAAVEYWKTLRTDEDAEFDAEVVIDAAELSPFVTWGTNPGQGAPLSASVPDPASYEDASERYAAEKALEYMGLEAGQPLRSIKVDTVFVGSCTNGRIEDLRAAAELIKGRKVADGVRMLVVPGSARVGLQAVSEGLDVVFKDAGAEWRHAGCSMCLGMNPDQLAPGERSASTSNRNFEGRQGKGGRTHLVSPQVAAATAVLGHLASPADLADADTRTPAGV

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Crispr_ID: NZ_CP023694_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP023694_12

7560452-7560576

Orphan

Consensus_repeat	Method
TACCCGCACCCTCAGCCGTACCC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP023694_12

>merge|NZ_CP023694|12|7560452-7560576|CRISPRCasFinder
TACGTGCCGCCTCAGCCGGGCCCGGCGCCGTACGGCTACCCGCACCCTCAGCCGTACCCCCCGCACCCGCACACGCACCCACAGCCGTACCCGTACGTCCCCCAGCCGTACCCGCACCCGCAGCC

>NZ_CP023694|12|11|7560452-7560576|CRISPRCasFinder
TACGTGCCGCCTCAGCCGGGCCC	GGCGCCGTACGGCTACCCGCACCCTCAGCCGTAC
CCCCCGCACCCGCACACGCACCC	ACAGCCGTACCCGTACGTCCCC
CAGCCGTACCCGCACCCGCAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP023694.1\|WP_150483892.1\|7551952_7552852_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP023694.1\|WP_150483893.1\|7552870_7553668_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224332
NZ_CP023694.1\|WP_150485626.1\|7558973_7560218_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP023694.1\|WP_150483891.1\|7550700_7551858_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|378987
NZ_CP023694.1\|WP_150483898.1\|7562290_7563313_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|275173
NZ_CP023694.1\|WP_150483901.1\|7566120_7568964_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223627
NZ_CP023694.1\|WP_150485628.1\|7563429_7564179_+\|UTRA-domain-containing-protein	unknown	unknown	gnl\|CDD\|225099
NZ_CP023694.1\|WP_150483899.1\|7564287_7565436_+\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP023694.1\|WP_150483902.1\|7568960_7571075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226729
NZ_CP023694.1\|WP_150483900.1\|7565432_7566014_+\|sugar-kinase	unknown	unknown	unknown
NZ_CP023694.1\|WP_150483903.1\|7571128_7571455_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP023694.1\|WP_150483894.1\|7553831_7555172_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|238640
NZ_CP023694.1\|WP_150483896.1\|7556400_7557162_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP023694.1\|WP_086600016.1\|7558559_7558760_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_086849845.1\|7557337_7557964_+\|deaminase	unknown	unknown	gnl\|CDD\|334719
NZ_CP023694.1\|WP_150485627.1\|7560631_7561489_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP023694.1\|WP_086849847.1\|7558115_7558511_+\|ribonuclease	unknown	unknown	gnl\|CDD\|238340
NZ_CP023694.1\|WP_150483904.1\|7571478_7571886_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380361
NZ_CP023694.1\|WP_150483895.1\|7555206_7556322_+\|allantoicase	unknown	unknown	gnl\|CDD\|237319
NZ_CP023694.1\|WP_150483897.1\|7561587_7562271_+\|response-regulator	unknown	unknown	gnl\|CDD\|225107

Protein	Function_ID	Function_description	E-value
NZ_CP023694.1\|WP_150483892.1\|7551952_7552852_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	7.63282e-36
NZ_CP023694.1\|WP_150483893.1\|7552870_7553668_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	6.9341e-73
NZ_CP023694.1\|WP_150485626.1\|7558973_7560218_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.44477e-30
NZ_CP023694.1\|WP_150483899.1\|7564287_7565436_+\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	5.67976e-89
NZ_CP023694.1\|WP_086849847.1\|7558115_7558511_+\|ribonuclease	gnl\|CDD\|238340	cd00607, RNase_Sa, RNase_Sa. Ribonucleases first isolated from Streptomyces aureofaciens. In general, ribonucleases cleave phosphodiester bonds in RNA and are essential for both non-specific RNA degradation and for numerous forms of RNA processing. RNAse Sa is a guanylate specific endoribonuclease which belongs to the superfamily of microbial ribonucleases. Typical of this sub-family, the enzyme hydrolyses the phosphodiester bonds of RNA at the 3' oxygen end of guanosine residues to yield oligonucleotides with the guanosine-2',3'-cyclophosphate at the 3' end and the hydroxyl group at the 5' end. The terminal guanosine-2,3'-cyclophosphate is hydrolysed by guanyl RNAses to give guanosine-3'-phosphate.	1.85211e-45
NZ_CP023694.1\|WP_150483901.1\|7566120_7568964_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.82556e-120
NZ_CP023694.1\|WP_150485628.1\|7563429_7564179_+\|UTRA-domain-containing-protein	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.62445e-65
NZ_CP023694.1\|WP_150483904.1\|7571478_7571886_-\|cupin-domain-containing-protein	gnl\|CDD\|380361	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain. This family includes archaeal, eukaryotic, and bacterial proteins homologous to hydroxynitrile lyase from Granulicella tundricola (GtHNL), a novel class of HNLs that does not show any sequence or structural similarity to any other HNL and does not contain conserved motifs typical of HNLs. HNLs comprise a diverse group of enzymes that vary in terms of their substrate specificity, enantioselectivity and the need for a co-factor. In plants, they catalyze the reversible cleavage of cyanohydrins, yielding HCN and aldehydes or ketones. Also included in this family is TM1010 from Thermotoga maritima, a protein of unknown function. Some but not all members of this family have N- or C-terminal carboxymuconolactone decarboxylase domains in addition to the cupin domain. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.60285e-44
NZ_CP023694.1\|WP_150483903.1\|7571128_7571455_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	1.15893e-28
NZ_CP023694.1\|WP_150483894.1\|7553831_7555172_+\|allantoinase-AllB	gnl\|CDD\|238640	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.	0
NZ_CP023694.1\|WP_150483896.1\|7556400_7557162_-\|SDR-family-oxidoreductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.42418e-83
NZ_CP023694.1\|WP_150483891.1\|7550700_7551858_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|378987	pfam12893, Lumazine_bd_2, Putative lumazine-binding. This is a family of uncharacterized proteins. However, the family belongs to the NTF2-like superfamily of various enzymes, and some of the members of the family are putative dehydrogenases.	2.587e-37
NZ_CP023694.1\|WP_086849845.1\|7557337_7557964_+\|deaminase	gnl\|CDD\|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	1.14317e-20
NZ_CP023694.1\|WP_150483902.1\|7568960_7571075_+\|hypothetical-protein	gnl\|CDD\|226729	COG4279, COG4279, Uncharacterized conserved protein [Function unknown].	4.24987e-44
NZ_CP023694.1\|WP_150483895.1\|7555206_7556322_+\|allantoicase	gnl\|CDD\|237319	PRK13257, PRK13257, allantoicase; Provisional.	3.5318e-178
NZ_CP023694.1\|WP_150483898.1\|7562290_7563313_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|275173	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars].	1.0664e-100
NZ_CP023694.1\|WP_150483897.1\|7561587_7562271_+\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.85106e-66

>NZ_CP023694.1|WP_150485626.1|7558973_7560218_+|sensor-histidine-kinase
MLTGETPALFTGRRWFVPSALLHELDPDAARAGQRPRRTARDWVVDFSCFVVAVLVGAAAIEALNNNPHVPEWLAVVDQLTGALACAAVWLRRRWPLGLAVAMVPITFLSETAGGAGLIALFTLAVHRPFRYVAWVGGINAALAPLYYWARPDADVPYLVSVPFAMVLTLAIVGWGMFVRSKRQLMVSLRDRARRAETEARLRAEQAQRLAREAIAREMHDVLAHRLTLLSVHAGALEFRPDAPPAETARAAGVIRESAHEALQDLREIIGVLRAGEPDDTGRPQPTLGALDTLVAESREAGMKVALDHRVDDAGTVPSSVGRTAYRIVQEGLTNARKHAPGTEVTVSVTGAPGDGLTVSVHNPPPEGEVPPVPGSGQGLIGLTERATLTGGRLEHGHTPQGGFEVRAWLPWAC
>NZ_CP023694.1|WP_086600016.1|7558559_7558760_-|hypothetical-protein
MKQVLEILGFLALVQGVAGLVHEFTDWNWGLVQRLGFLDGYEIYASVVLLVLGVALFAAAGSRKSV
>NZ_CP023694.1|WP_086849847.1|7558115_7558511_+|ribonuclease
MNFPPRASRLGAAAALLSALLVGGTVSATTADAAPTAVGSICYGDLPSQAHDTLDLIEQGGPFPFEQDGTVFQNREGILPSQSSGYYHEYTVITPGSSTRGARRIVTGEENREDYYTADHYESFDLVDYGC
>NZ_CP023694.1|WP_086849845.1|7557337_7557964_+|deaminase
MGKLVSTLFVTLDGVYQAPGGPHEDTRGGFTHGGWSFPYADEDFGRFIDEVFARPHAFLLGRRTYDIFNTFWPKVTDPADPVASKLNALPKYVPSSTLKDPEWAGTTVLTGDLAKEVTALKERTDGEIQVHGSGALVRSLLAHGLVDSLHLLTFPVVLGAGFRLFPEGAVPTAFRHAGGSVTSTGVSIQTYEVAGRPEYGEYALPEDA
>NZ_CP023694.1|WP_150483896.1|7556400_7557162_-|SDR-family-oxidoreductase
MTSQGTLGNLGTLNGKAALVTGASRGIGAATALRLAREGADVAVGYVNGKEAAEDVVRAVEELGRRAVAVRADAADAAEAAGAVTAAAEALGGLDILVNNAGVGVLGPLETLSLADVDRVLAVNVRGVFLTSQAAAARMPEGGRIITIGSCMAQRVPGPGGTLYATSKAALAGMTKALARELGGRGITANLVHPGPIDTDMNPADGPYAAGQAAMTALGRFGTADEVASMVAYLAGATYVTGAEFAVDGGHAA
>NZ_CP023694.1|WP_150483895.1|7555206_7556322_+|allantoicase
MTAIPSFTGDANPYGGGDPYADYRTADFPFTQYADLADRRLGAGVIAANDEFFAQRENLLVPGRAEFDPEHFGHKGKIMDGWETRRRRGASAEHPWPTAEDHDWALVRLGAPGVVRGIVVDTAHFRGNYPQAVSVEGTCVPGSPSPEELLGDDVKWTTLVPRTPVGGHAANGFPVAVEQRFTHLRVNQHPDGGIARLRVHGEVVPDPAWLEVLGTFDVVALENGGRVEDASDLFYSPATNTIQPGRSRKMDDGWETRRRRDQGHDWIRYRLAAQSRIRALEIDTAYLKGNSAGWASVSVRDGEDGQWREILPRTRLQPDTDHRFVLPVPAVGTHARVDIFPDGGISRLRLFGSLTEDGARRLAARHQELGG
>NZ_CP023694.1|WP_150483894.1|7553831_7555172_+|allantoinase-AllB
MSDAELVLRSTRVITPEGTRAASVAVAAGKITAVLPYDAPVPETARLEDLGDHVLLPGLVDTHVHVNDPGRTEWEGFWTATRAAAAGGITTLVDMPLNSLPPTTTVAHLRTKQQVAADKAHIDVGFWGGALPDNTTDLRPLHEAGVFGFKAFLSPSGVDEFPHLERDPLARTMTEIAAFDGLLIVHAEDPHLLASAPQRPGPRYADFLASRPRDAEDTAIARLIREAKALDARVHVLHLSSSDALPMIAEARAEGVRVTVETCPHYLTLTAEEVPDGASEFKCCPPIREAANQDLLWQALADGTIDCVVTDHSPSTADLKTDDFATAWGGISGLQLSLSAVWTEARRRGHGLEDVVRWMSARTSELVGLDDRKGAIAAGRDADFAVLAPDETFTVDPVALQHRNHVTAYAGRTLYGVVKSTWLRGQRIVADGEFTEPKGRLLTRTD
>NZ_CP023694.1|WP_150483893.1|7552870_7553668_-|helix-turn-helix-domain-containing-protein
MPTSSASTTDSPRSSANGGVQSLERAFDLLERMADAGGEVGLSELSASSGLPLPTIHRLMRTLVACGYVRQQSNRRYALGPRLIRLGESASRLLGTWARPYLARLVEETGETANMALLDGDEIVYVAQVPSKHSMRMFTEVGRRVLPHSTGVGKALLAGFPPEEVRALLNRTGMPAATEKTITTPDGFLAALEDVRRQGYAIDDNEQEIGVRCLAVSVPDSPTAAAISISGPAGRVTEAATEKIVPVLQQVAGELSEALATQNPA
>NZ_CP023694.1|WP_150483892.1|7551952_7552852_+|LysR-family-transcriptional-regulator
MDLTVWRTFVTVCRLGSLSAAAAELHHTQSAVSRQIAGLERQLGVPLMERHARGVRPTPAGEVFRRHALATLNEADRAVRAVRDARDGAVSPLAVGATPSLAAGIVPEAIRALLERDRAVRWSLLPGLSPDLHQRVITGDLDLAVVTDAPPGLPHDPRVERRFLGLDEMVVALPLGHPQAGRGPVHMRTLAEQTWVEDNDGSAALLRRHAARAGVSARIDLAAADLPGKLALVATGHAIALIPGVLTCALRTDVTTVSLLDPPTRGVYTITPRRDPHPTAALLLDRLATAFAPAGPTDS
>NZ_CP023694.1|WP_150483891.1|7550700_7551858_-|NAD(P)-binding-domain-containing-protein
MTTPHTIAVLGLGRMGDAIATRLAAQGRTVIGWTRSGRTSGAVRTTGDPRDAVAEAGLALLALFDGPACRQVLDDVRGALRADTIVVNTSTISPAEASELARRLGPFYVHAPVLGSVPAASAGALRILAAAEGDTLDGARPVLETLGSVLTVGDAATAAALKLIANNGLAGAVLALRDSLRQGDALGLPRDQVLDVLELGRLGGLVAHKRAFLTGEPVTAAAEFTIGALAKDMALLAAASNTPLRSAAGLADVPAGPEADIATAATAPAADDAVLEPLRAYVRGHATGDPAHFRDAFLPTAHVEGIRDGAFVSWPLEEYCALFTGRPAADEPARSRRIDTVDVHGTVATATMTLLHGADTFTDVFLLVRVGDRWRIANKAYHRHG
>NZ_CP023694.1|WP_150485627.1|7560631_7561489_+|hypothetical-protein
MRGGEWPSVRELLRQGQPRVSGCMWLVLLAPCTWFAFLPLVLGYSFARSARNLAHRLFPHTHRAVDDRHVTRVQKVRAWTAAAMSLLLLAMYGKPEDVAEAQEQYMMRLAVTPPLLLLSAPVVIAVLFRWASAETRSAMRVRVRAALRSAGWYIGAVTAVPLLGGAIMLLHRNQTPSSGSAGAAPWLILATALPLAWLLFFVGFATGPAIRTGFNTAAVHAALPALLTGTLVWEFTAISLLAGGLPPGPPMIQALAVIGGPASVTAVVWWEISRLRALFGVTLRA
>NZ_CP023694.1|WP_150483897.1|7561587_7562271_+|response-regulator
MTAIRLLLVDDDPLVRAGLSFMMGGADDIEIVGEAADGGEVEALVDRTRPDVVLMDIRMPTVDGLTATERLRARKDAPQVVVLTTFHADEQVLRALRAGAAGFVLKDTPPTEILAAVRRVAAGDPVLSPTVTRQLMLHAVGTAADTRRTRARARMAALNDREREVAVAVGRGLSNAEIATGLFMSVATVKTHVSRILAKLDLNNRVQIALLAYDAGLLEEEQEGHGH
>NZ_CP023694.1|WP_150483898.1|7562290_7563313_-|Gfo/Idh/MocA-family-oxidoreductase
MRIGVIGTGRIGTIHANTLSRHRDVGSLILTDADVSRAQDLAHRLGETAAPGVEEIFRWGVDAVVITTATSAHAELIGRAARSGLPVFCEKPIALDLPGTLSAIAEVETAGTVLQMGFQRRFDAGYTGAREAVRSGRLGRLHTVRALTSDQTPPPAAWLPLSGGLYRDTLIHDFDVLRWVTGREVADVYAAGSDAGPAMFRAAGDVDTGAALLTLDDGTLATITGARLNGAGYDVRMELAGELDQIVVGLDDRTPIASTEPTGPPAADKPWTGFLERFGPAYEAELNAFVEVVRGERANPCDGREALQALRVAEACELSRRERRPVHLAEIPGGAAAPFV
>NZ_CP023694.1|WP_150485628.1|7563429_7564179_+|UTRA-domain-containing-protein
MDPTVQLELSVDRSSPVPLYFQLSQQLEAAIEHGTLTPGSLLGNEIELAARLGLSRPTVRQAIQSLVDKGLLVRRRGVGTQVVHSQVKRPLELSSLYDDLEAAGQRPATKVLVNTLVPASAEVAAALGVAEDSDVHRVERLRLAHGEPMAYLCNFLPPGLIDLDTGQLETTGLYRLMRAAGITLHSARQSIGARAATTVEAERLAEETGAPLLTMQRVTFDDTGRAVEYGTHTYRPTRYSFEFQLLVRT
>NZ_CP023694.1|WP_150483899.1|7564287_7565436_+|ROK-family-glucokinase
MSTYRDFTAPIGSRRATVLRTVGTRERRSHLTAPRVPTVGIDIGGTKVMAGVVDADGNILEKVRTETPDKSKSPKVVEDTIAELVLDLSDRHDVHAVGIGAAGWVDADRNRVLFAPHLSWRNEPLRDRLSGRLSVPVLVDNDANTAAWAEWRFGAGRGEDHLVMITLGTGIGGAILEDGQVKRGKYGVAGEFGHMQVVPGGHRCPCGNRGCWEQYSSGNALVREARELAAADSPVAYGIIEHVKGNIGDITGPMITELAREGDAMCIELLQDIGQWLGVGIANLAAALDPSCFVIGGGVSAADDLLIGPARDAFRRHLTGRGYRPEARIARAQLGPEAGMVGAADLARLVARRFRRAKRRRVERYERYERYTQSLRSTQETL
>NZ_CP023694.1|WP_150483900.1|7565432_7566014_+|sugar-kinase
MTASLPHQGSWPDGEERPAEDRRHMIRRRALTLLIIVLLIGIPAGYLVISANQSRDSGKDKEAKYSATGLTEGWPSKLQRRIYQVPVPHPAWHVAYYETNNWKTSRLYAQFETNAAGLDAYLTGLGVTRKDLKKDHITIGARDRKVTGWKFPEGDSWYGFVHRQKNPAPTHDVVVDLSNPAYPWVYVVSRTVP
>NZ_CP023694.1|WP_150483901.1|7566120_7568964_+|DEAD/DEAH-box-helicase
MGDTAVTAERGERTVPVRLPAVFLPAPVPRDGRMAFWDPEGEPLPAEATELTENTELTVVRRHGAGVRRRTAPALTLPLDEALPLLVRARHDPAAHPATACWGAAALHALRLTARGRLLPGLTPTGHDAWRAGPLDPDDIAHLRAVAAALPYEGHAVPLPGPGPISLPEPEALVRAFLDAVADTLPRTPAAPHTTGRPFAAREAQHLPDAHDWAAEVAAGMDAGVRVSLRLDLSAYDLFDNAFDGGARGAGAAIVQVHSLADPTLVADAAALWAGEADEAFGPRARVDAALAVRRAARVWPPLDRLSDQDVPDVLALTEEELSDLLGVAATRLAAAGVAVHWPRDLAQDLSAAAVVRPAPGSATDGTGFFESEDLLQFRWQLALGGDPLSESEMDALAEAHRPVVRLRDQWVLVDPALVRKARKRDLGLLDPVDALSVALTGTADVDGETVEAVPAGALAALRDRLTAGVRPAAPPPGLHATLRDYQLRGLAWLDLMTSLGLGGCLADDMGLGKTVTLIALHLKRARREPTLVVCPASLLGNWQREITRFAPGVPVRRFHGPDRSLDDLDGGFVLTTYGTMRSAAPALAGQVWGMVVADEAQHVKNPYSATARALRTIPSPARVALTGTPVENNLSELWALLDWTTPGLLGPLKSFRARHARAVETGEDEEAVERLARLVRPFLLRRKKSDPGIVPELPPKTETDHPVPLTREQGALYEAVVRESMLAIETAEGMARRGLVLKLLTSLKQICNHPALYLKEEPRAGGDRLAARSGKLALLDELLDTLLAEDGSALVFTQYVGMARLITSHLATRAVPVDLLHGGTPVPERERMVDRFQAGSTPVLVLSLKAAGTGLNLTRAGHVVHFDRWWNPAVEEQATDRAYRIGQTQPVQVHRLITEGTIEDRIAEMLQAKRALADAILGSGESALTELTDRELSDLVSLRSTP
>NZ_CP023694.1|WP_150483902.1|7568960_7571075_+|hypothetical-protein
MTPRPADEARRALRAARERTASDPAPASRPAPSPAPAPVGQEAPQPADVAREALRRAVSEHRGGAGPARDMGALPDADAEALADQPGDTSRGTPGPAGPGGSDHRGEIGEAPAPTDSAGAPSGEQDRSSAPPESTVTAPSGGTDRPAPRAADVAREALRAAREDARRARKETESEGARRRRGTRQSRVDERAAALRRARGNAVGGEARDVRQVLSDAFRMPATDPGGTPEAPDETGHEDAPSPGPGIPDAAPATAPPHAPAPSTTPPPVPRAPGSLHSPLAPHSMAAPNRDNELRRTFPAFPPREPDDKGFAESWWGNAWVTALEQGALDVKRLERGRGYAGQGHVDAITVTPGLVLAYVRGSRPRPYRVQVRLRTLDDQDWERFLDAAADRPGHIAALLDKEMPQSLADCGVPLLPGPGDLEPRCSCPDRGHPCKHAAALCYQTARLLDADPFVLLLLRGRGERELLDALSRLSATRAARAAQDKGPAPLPGVRASDVLTPRALPPLPAPLPPPPHPEQPPAYPASPGGPDPFALDQLATDAAARAHALLTTGRDPVGQLTLWEDAVRLAAARPGSGLTAGTRALYSSLATAAGRTPSELARAVAAWRQGGPEGLAVLEEPWDPPAGRFDRARPLLLAADMPAFRPWRNHLTHPHGHVQLRLGRDGLWYAYESEPGQEDWWPRGTPDLDPVGALTGLGMASDL
>NZ_CP023694.1|WP_150483903.1|7571128_7571455_-|carboxymuconolactone-decarboxylase-family-protein
MTDQPRQIGGGRRTIGDVAPKLAELTDDVLFEDVWNRTELAARDRSLITVAVLIAGGDTDQLRFHLGRAKENGVTETELIEAITHLAFYAGWPKAMTAVTVAKQVFSD
>NZ_CP023694.1|WP_150483904.1|7571478_7571886_-|cupin-domain-containing-protein
MEFVKQQDTVKAPTDWFTGDVWFDVIHAGKEPSRMRANLVRFSPGARTHWHSHVLGQTLHVVSGTALIGTRDGTVFEAHPGETVTCPPNEEHWHGATPGRFMEHIAMWEGKGDGSEETTWNEPVTDEQYNRPRSR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP023694_8	8.4\|4193634\|18\|NZ_CP023694\|CRT	4193634-4193651	18	NZ_CP023694.1	5323715-5323732	0	1.0
NZ_CP023694_6	6.4\|2493975\|18\|NZ_CP023694\|CRT	2493975-2493992	18	NZ_CP023694.1	5180185-5180202	1	0.944

1. spacer 8.4|4193634|18|NZ_CP023694|CRT matches to position: 5323715-5323732, mismatch: 0, identity: 1.0

gcgagccgctggagacca	CRISPR spacer
gcgagccgctggagacca	Protospacer
******************

2. spacer 6.4|2493975|18|NZ_CP023694|CRT matches to position: 5180185-5180202, mismatch: 1, identity: 0.944

gggcccgacccgcgagac	CRISPR spacer
gggccggacccgcgagac	Protospacer
***** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP023694_6	6.3\|2493922\|27\|NZ_CP023694\|CRT	2493922-2493948	27	NZ_CP030370	Salinibacter ruber strain RM158 plasmid pSR31, complete sequence	6553-6579	3	0.889
NZ_CP023694_6	6.3\|2493922\|27\|NZ_CP023694\|CRT	2493922-2493948	27	FQ482085	Erwinia tasmaniensis phage phiEt88 complete genome	32119-32145	6	0.778
NZ_CP023694_6	6.3\|2493922\|27\|NZ_CP023694\|CRT	2493922-2493948	27	NC_015295	Erwinia phage phiEt88, complete genome	32119-32145	6	0.778
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	434632-434662	6	0.806
NZ_CP023694_6	6.3\|2493922\|27\|NZ_CP023694\|CRT	2493922-2493948	27	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	215857-215883	7	0.741
NZ_CP023694_6	6.3\|2493922\|27\|NZ_CP023694\|CRT	2493922-2493948	27	MN694339	Marine virus AFVG_250M667, complete genome	33423-33449	7	0.741
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3936203-3936232	8	0.733
NZ_CP023694_1	1.2\|208525\|30\|NZ_CP023694\|CRISPRCasFinder	208525-208554	30	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	658510-658539	8	0.733
NZ_CP023694_1	1.2\|208525\|30\|NZ_CP023694\|CRISPRCasFinder	208525-208554	30	NZ_CP023064	Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence	478946-478975	8	0.733
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	300302-300332	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NC_013856	Azospirillum sp. B510 plasmid pAB510b, complete sequence	327998-328028	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	MN703407	Microbacterium phage Leaf, complete genome	64991-65021	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	MN703414	Microbacterium phage Dewdrop, complete genome	64991-65021	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1066632-1066662	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2432270-2432300	8	0.742
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	140376-140406	8	0.742
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	14161-14190	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	14470-14499	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	14779-14808	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	15397-15426	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	15706-15735	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	97141-97170	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	97450-97479	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	97759-97788	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	98068-98097	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	98377-98406	9	0.7
NZ_CP023694_1	1.1\|208471\|30\|NZ_CP023694\|CRISPRCasFinder	208471-208500	30	MK471334	Enterobacter cloacae plasmid pNRZ-28021, complete sequence	98686-98715	9	0.7
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	894134-894164	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	385408-385438	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	400903-400933	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	388273-388303	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	428997-429027	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	385381-385411	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	404837-404867	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	391656-391686	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	399802-399832	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	400903-400933	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	404837-404867	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	385381-385411	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	384943-384973	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	22445-22475	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	516139-516169	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	524381-524411	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP010864	Marinovum algicola DG 898 plasmid pMaD9, complete sequence	33947-33977	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_LR134445	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence	39436-39466	9	0.71
NZ_CP023694_7	7.1\|2981205\|31\|NZ_CP023694\|CRISPRCasFinder	2981205-2981235	31	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	186588-186618	10	0.677

1. spacer 6.3|2493922|27|NZ_CP023694|CRT matches to NZ_CP030370 (Salinibacter ruber strain RM158 plasmid pSR31, complete sequence) position: , mismatch: 3, identity: 0.889

aggctcagcccacgcagccgcccacgt	CRISPR spacer
aggctcaccccatgcagccgcccacga	Protospacer
******* ****.*************

2. spacer 6.3|2493922|27|NZ_CP023694|CRT matches to FQ482085 (Erwinia tasmaniensis phage phiEt88 complete genome) position: , mismatch: 6, identity: 0.778

aggctcagcccacgcagccgcccacgt	CRISPR spacer
cgcagcagcccacgcagcagcccacgc	Protospacer
 *   ************* *******.

3. spacer 6.3|2493922|27|NZ_CP023694|CRT matches to NC_015295 (Erwinia phage phiEt88, complete genome) position: , mismatch: 6, identity: 0.778

aggctcagcccacgcagccgcccacgt	CRISPR spacer
cgcagcagcccacgcagcagcccacgc	Protospacer
 *   ************* *******.

4. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 6, identity: 0.806

cctggagctgcgcaccggcgacg--gatccatt	CRISPR spacer
tctggagctgcgcaccggcggcgtcgatgcg--	Protospacer
.*******************.**  *** *.

5. spacer 6.3|2493922|27|NZ_CP023694|CRT matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 7, identity: 0.741

aggctcagcccacgcagccgcccacgt	CRISPR spacer
caaatcagcccacgcagccgcccgccc	Protospacer
 .. *******************.* .

6. spacer 6.3|2493922|27|NZ_CP023694|CRT matches to MN694339 (Marine virus AFVG_250M667, complete genome) position: , mismatch: 7, identity: 0.741

aggctcagcccacgcagccgcccacgt	CRISPR spacer
gctcgcagcccacgcagccgcccatag	Protospacer
.  * *******************..

7. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.733

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
tgcgacaccgtcgcagcggtcgcgagcgtc	Protospacer
 ***********.****** ****..*. .

8. spacer 1.2|208525|30|NZ_CP023694|CRISPRCasFinder matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 8, identity: 0.733

agtcttgccggcacgacggaaccgagcagc	CRISPR spacer
cggcttgccggcccgacggaaccggtgacg	Protospacer
 * ********* ***********.  *

9. spacer 1.2|208525|30|NZ_CP023694|CRISPRCasFinder matches to NZ_CP023064 (Sinorhizobium sp. CCBAU 05631 plasmid pSS05631b, complete sequence) position: , mismatch: 8, identity: 0.733

agtcttgccggcacgacggaaccgagcagc	CRISPR spacer
cggcttgccggcccgacggaaccggtgacg	Protospacer
 * ********* ***********.  *

10. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
gctggagctgcgcgacggcgacggcacggtc	Protospacer
 ************. *********  * .*.

11. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
gctgctgctgcgcaccggcgacggctaccgc	Protospacer
 ***  ****************** * *  .

12. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to MN703407 (Microbacterium phage Leaf, complete genome) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cctggagctgcgtcccggcgacgttctcgat	Protospacer
************. *********  ..*. *

13. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to MN703414 (Microbacterium phage Dewdrop, complete genome) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cctggagctgcgtcccggcgacgttctcgat	Protospacer
************. *********  ..*. *

14. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
ccgggagctgcgcaccggcgccgccaccgac	Protospacer
** ***************** **   **. .

15. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
ccgggagctgcgcaccggcgccgccaccgac	Protospacer
** ***************** **   **. .

16. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
gctggagctgcgcgacggcgacggcacggtc	Protospacer
 ************. *********  * .*.

17. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

18. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

19. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

20. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

21. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

22. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

23. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

24. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

25. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

26. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

27. spacer 1.1|208471|30|NZ_CP023694|CRISPRCasFinder matches to MK471334 (Enterobacter cloacae plasmid pNRZ-28021, complete sequence) position: , mismatch: 9, identity: 0.7

ggcgacaccgtcacagcgggcgcggacagt	CRISPR spacer
ccgtacaccgtcacggcgggcgcggcttct	Protospacer
    **********.********** .  *

28. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
agcgcagcagcgcaccggcgacggatctcac	Protospacer
  .* *** ******************.  .

29. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

30. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

31. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
ctaggagctgcgcaccggccacggagatgga	Protospacer
*. **************** *****  ..

32. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

33. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

34. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

35. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

36. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

37. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

38. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

39. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

40. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

41. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
ctaggagctgcgcaccggccacggagatgga	Protospacer
*. **************** *****  ..

42. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cgaggagctgcgcaccggccacggagatgga	Protospacer
*  **************** *****  ..

43. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
cggcaggctgcgcaccggcgtcagatccagc	Protospacer
*   ..************** *.****** .

44. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP010864 (Marinovum algicola DG 898 plasmid pMaD9, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
gctggagctgcgcactggcggcggtttgccc	Protospacer
 **************.****.*** *.  ..

45. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_LR134445 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.71

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
atcggcgctgcgcaccggccacggatggaag	Protospacer
 ..** ************* ******  *

46. spacer 7.1|2981205|31|NZ_CP023694|CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 10, identity: 0.677

cctggagctgcgcaccggcgacggatccatt	CRISPR spacer
gctggagctgcgcggcggcgacggccggccg	Protospacer
 ************. ********* .   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1546248 : 1570832

Streptomyces_phage(42.86%)

tail,protease,head,integrase,terminase,capsid,portal

attL 1541807:1541822|attR 1557091:1557106

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1541807:1541822	attL	NA	NA	NA	NA
WP_150479553.1\|1546248_1547265_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_150479554.1\|1547983_1548208_+	hypothetical protein	NA	NA	NA	NA
WP_150479555.1\|1548295_1548574_+	hypothetical protein	NA	NA	NA	NA
WP_150479556.1\|1548793_1549120_-	hypothetical protein	NA	NA	NA	NA
WP_150479557.1\|1549119_1549329_-	hypothetical protein	NA	NA	NA	NA
WP_150479558.1\|1549291_1549612_-	hypothetical protein	NA	NA	NA	NA
WP_150479559.1\|1549645_1549999_-	hypothetical protein	NA	NA	NA	NA
WP_150479560.1\|1549995_1550184_-	hypothetical protein	NA	NA	NA	NA
WP_150479561.1\|1550180_1551119_-	N-acetylmuramoyl-L-alanine amidase	A0A1J0MCN5	Streptomyces_phage	7.1e-107	62.4
WP_150479562.1\|1551166_1551778_-	hypothetical protein	A0A2H5BLW8	Streptomyces_phage	3.2e-60	53.2
WP_150479563.1\|1551787_1552390_-	hypothetical protein	NA	NA	NA	NA
WP_150479564.1\|1552386_1553478_-	DUF5047 domain-containing protein	Q6VY40	Streptomyces_phage	8.8e-101	53.4
WP_150479565.1\|1553481_1555713_-	hypothetical protein	Q6VY41	Streptomyces_phage	2.5e-203	52.5
WP_150479566.1\|1555723_1560502_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4PIU8	Corynebacterium_phage	1.6e-45	33.6
1557091:1557106	attR	NA	NA	NA	NA
WP_150479567.1\|1560514_1560901_-	hypothetical protein	A0A2H5BLY7	Streptomyces_phage	2.5e-10	41.2
WP_150479568.1\|1560930_1561266_-	hypothetical protein	NA	NA	NA	NA
WP_150479569.1\|1561342_1561903_-\|tail	phage tail protein	A0A2H4PEW8	Gordonia_phage	6.7e-12	29.9
WP_150479570.1\|1561984_1562365_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_150479571.1\|1562382_1562613_-	hypothetical protein	NA	NA	NA	NA
WP_150479572.1\|1562614_1562980_-	hypothetical protein	NA	NA	NA	NA
WP_150479573.1\|1562979_1563333_-	hypothetical protein	A0A2P1JSY3	Streptomyces_phage	1.5e-25	57.8
WP_150479574.1\|1563329_1563881_-	mobile element protein	A0A0U4JBB0	Arthrobacter_phage	1.5e-08	36.1
WP_150485259.1\|1563867_1564086_-	hypothetical protein	NA	NA	NA	NA
WP_150479575.1\|1564393_1565686_-\|capsid	phage major capsid protein	M4WNS1	Mycobacterium_phage	1.8e-92	43.8
WP_150479576.1\|1565694_1566510_-\|head,protease	HK97 family phage prohead protease	A0A142K7E0	Mycobacterium_phage	8.5e-40	39.4
WP_150479577.1\|1566512_1568444_-\|portal	phage portal protein	A0A0U4K705	Arthrobacter_phage	1.4e-128	42.5
WP_150479578.1\|1568443_1568665_-	hypothetical protein	NA	NA	NA	NA
WP_167537535.1\|1568683_1570405_-\|terminase	terminase large subunit	A0A1B3B1U6	Gordonia_phage	4.7e-197	59.6
WP_150479579.1\|1570367_1570832_-\|terminase	phage terminase small subunit P27 family	V9H0V4	Actinophage	5.3e-47	87.2

DBSCAN-SWA_2

8615707 : 8623571

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150484612.1\|8615707_8618158_+	SpoIIE family protein phosphatase	A0A1V0E640	Streptomyces_phage	3.7e-06	35.3
WP_150484613.1\|8618250_8618670_+	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	2.3e-12	33.6
WP_150484614.1\|8618850_8619033_+	hypothetical protein	NA	NA	NA	NA
WP_150484615.1\|8619137_8620205_+	glucose-1-phosphate thymidylyltransferase	A0A1D7XFC1	Escherichia_phage	9.4e-39	38.4
WP_150484616.1\|8620201_8621182_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.0e-71	43.9
WP_150484617.1\|8621178_8622057_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.3e-30	36.0
WP_150484618.1\|8622053_8622857_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_150484619.1\|8622962_8623571_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	6.1e-27	39.0

DBSCAN-SWA_3

9172300 : 9235242

Moumouvirus(20.0%)

transposase,protease,integrase

attL 9182525:9182541|attR 9246087:9246103

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150485736.1\|9172300_9172567_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_150485035.1\|9173819_9174350_+	SigE family RNA polymerase sigma factor	NA	NA	NA	NA
WP_167537517.1\|9174346_9175336_+	hypothetical protein	NA	NA	NA	NA
WP_150485036.1\|9175759_9176302_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_150485037.1\|9176651_9177647_-	oxidoreductase	NA	NA	NA	NA
WP_150485737.1\|9178327_9178849_+	hypothetical protein	NA	NA	NA	NA
WP_150485038.1\|9179055_9179949_-	alpha/beta hydrolase fold domain-containing protein	M1PGN2	Moumouvirus	6.1e-23	27.2
WP_150485039.1\|9180696_9180924_+	hypothetical protein	NA	NA	NA	NA
WP_150485040.1\|9182175_9182460_+	hypothetical protein	NA	NA	NA	NA
WP_150485041.1\|9182456_9182828_+	fic family toxin-antitoxin system, toxin component	NA	NA	NA	NA
9182525:9182541	attL	NA	NA	NA	NA
WP_150485042.1\|9183020_9183398_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_150485043.1\|9183394_9183979_+	hypothetical protein	NA	NA	NA	NA
WP_150485044.1\|9184750_9185506_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_150485045.1\|9185634_9186069_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_150485046.1\|9186344_9186524_+	hypothetical protein	NA	NA	NA	NA
WP_150485047.1\|9187525_9188212_+	haloacid dehalogenase type II	NA	NA	NA	NA
WP_150485048.1\|9189452_9189992_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_150485049.1\|9189988_9190789_+	hypothetical protein	NA	NA	NA	NA
WP_150485050.1\|9190822_9191617_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	8.3e-16	32.1
WP_150485051.1\|9191613_9192924_+	hypothetical protein	NA	NA	NA	NA
WP_150485052.1\|9193491_9193779_-	hypothetical protein	NA	NA	NA	NA
WP_150485053.1\|9193791_9197310_-	CHAT domain-containing protein	NA	NA	NA	NA
WP_167537518.1\|9197313_9197478_-	hypothetical protein	NA	NA	NA	NA
WP_150485054.1\|9197477_9198128_-	hypothetical protein	NA	NA	NA	NA
WP_167537519.1\|9198284_9198455_+	DUF4259 domain-containing protein	NA	NA	NA	NA
WP_150485056.1\|9199231_9200212_-	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_150485057.1\|9202212_9204513_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_150485058.1\|9205235_9205769_+	hypothetical protein	NA	NA	NA	NA
WP_150485060.1\|9206846_9207791_-	hypothetical protein	NA	NA	NA	NA
WP_150485061.1\|9207787_9208144_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_150485063.1\|9208490_9209300_-	hypothetical protein	NA	NA	NA	NA
WP_150485064.1\|9209431_9210301_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-06	27.4
WP_150485065.1\|9210548_9211052_-	N-acetyltransferase	NA	NA	NA	NA
WP_150485066.1\|9212103_9213102_+	DUF218 domain-containing protein	NA	NA	NA	NA
WP_150485067.1\|9213252_9214161_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_150485068.1\|9214233_9215016_+	hypothetical protein	NA	NA	NA	NA
WP_150485069.1\|9215519_9215699_-	hypothetical protein	NA	NA	NA	NA
WP_150485070.1\|9216006_9216273_-	hypothetical protein	NA	NA	NA	NA
WP_150485071.1\|9216931_9217201_+	hypothetical protein	NA	NA	NA	NA
WP_167537520.1\|9218137_9218587_-	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_150478511.1\|9218717_9219488_+\|transposase	transposase	NA	NA	NA	NA
WP_150485740.1\|9219589_9220360_+\|transposase	transposase	NA	NA	NA	NA
WP_150485741.1\|9221172_9221970_+	ATP-binding protein	A0A1B1IWL7	uncultured_Mediterranean_phage	1.3e-05	32.2
WP_045297499.1\|9222051_9222633_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_150485072.1\|9222774_9223956_+	cytochrome P450	NA	NA	NA	NA
WP_150485073.1\|9224390_9225383_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_150485074.1\|9225998_9226199_+	DUF5133 domain-containing protein	NA	NA	NA	NA
WP_150485075.1\|9226667_9226922_-	hypothetical protein	NA	NA	NA	NA
WP_150485742.1\|9227034_9227241_-	hypothetical protein	NA	NA	NA	NA
WP_150485076.1\|9227352_9228249_-	phosphotransferase	NA	NA	NA	NA
WP_150485077.1\|9228399_9229734_-	glycosyltransferase	NA	NA	NA	NA
WP_020269611.1\|9229730_9229904_-	hypothetical protein	NA	NA	NA	NA
WP_150485078.1\|9229931_9231197_-	nucleotide sugar dehydrogenase	M1I6A7	Acanthocystis_turfacea_Chlorella_virus	1.5e-35	30.7
WP_167537237.1\|9232443_9232761_-	hypothetical protein	NA	NA	NA	NA
WP_150485743.1\|9232828_9233164_+	hypothetical protein	NA	NA	NA	NA
WP_150485079.1\|9234099_9235242_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
9246087:9246103	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP023694

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection