CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP029195	Streptomyces venezuelae strain ATCC 10595 chromosome, complete genome	16 crisprs	csa3,cas3,DEDDh,DinG,WYL,c2c9_V-U4,cas4	7	14	2	0

1. NZ_CP029195

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP029195_1

• CRISPR_ID: NZ_CP029195_1
• CRISPR_location: 183376-183452
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_1

Consensus_repeat	Method
CCGCGGGCGGGCGGCGTCACGCG	CRISPRCasFinder

spacers of NZ_CP029195_1

>1.1|183399|31|NZ_CP029195|CRISPRCasFinder
AGTGCGACGCGTCACGCGGGTCGGACGCGTC

CRISPR arrays and Neighbor proteins around NZ_CP029195_1

CRISPR arrays

The CRISPR arrays of NZ_CP029195_1

>merge|NZ_CP029195|1|183376-183452|CRISPRCasFinder
CCGCGGGCGGGCGGCGTCACGCGAGTGCGACGCGTCACGCGGGTCGGACGCGTCACGCGGGCGGGCGGCGTCACGCG

>NZ_CP029195|1|1|183376-183452|CRISPRCasFinder
CCGCGGGCGGGCGGCGTCACGCG	AGTGCGACGCGTCACGCGGGTCGGACGCGTC
ACGCGGGCGGGCGGCGTCACGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150500138.1|191272_191881_+|DUF2892-domain-containing-protein	unknown	unknown	gnl|CDD|238089
NZ_CP029195.1|WP_150500132.1|188052_189327_+|MFS-transporter	unknown	unknown	gnl|CDD|340882
NZ_CP029195.1|WP_150500142.1|192820_193324_-|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|315378
NZ_CP029195.1|WP_150500134.1|189323_189641_+|cupin	unknown	unknown	gnl|CDD|380358
NZ_CP029195.1|WP_015038477.1|184955_185540_+|TMEM165/GDT1-family-protein	unknown	unknown	gnl|CDD|225030
NZ_CP029195.1|WP_015038484.1|176976_177189_+|DNA-binding-protein	unknown	unknown	gnl|CDD|181104
NZ_CP029195.1|WP_150500118.1|177886_179071_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|226651
NZ_CP029195.1|WP_150500140.1|191877_192750_+|TSUP-family-transporter	unknown	unknown	gnl|CDD|376667
NZ_CP029195.1|WP_150500136.1|189734_191123_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293810
NZ_CP029195.1|WP_150500116.1|177262_177847_+|nucleoside-phosphorylase	unknown	unknown	gnl|CDD|235538
NZ_CP029195.1|WP_015038488.1|173331_173847_+|PaaI-family-thioesterase	unknown	unknown	gnl|CDD|239527
NZ_CP029195.1|WP_015038489.1|172745_173219_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224647
NZ_CP029195.1|WP_150500130.1|187042_187978_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223656
NZ_CP029195.1|WP_150508111.1|175404_176793_+|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|226082
NZ_CP029195.1|WP_051025990.1|173879_174212_-|hypothetical-protein	unknown	unknown	gnl|CDD|375228
NZ_CP029195.1|WP_150500128.1|185716_187012_+|amidohydrolase	unknown	unknown	gnl|CDD|349917
NZ_CP029195.1|WP_150500126.1|184025_184637_-|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP029195.1|WP_150500122.1|181391_182504_-|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NZ_CP029195.1|WP_150500120.1|179263_181327_-|hypothetical-protein	unknown	unknown	gnl|CDD|273375
NZ_CP029195.1|WP_150500113.1|174505_175375_+|AAA-domain-containing-protein	unknown	unknown	gnl|CDD|223786

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150500138.1|191272_191881_+|DUF2892-domain-containing-protein	gnl|CDD|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.60806e-26
NZ_CP029195.1|WP_150500132.1|188052_189327_+|MFS-transporter	gnl|CDD|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.41989e-45
NZ_CP029195.1|WP_150500142.1|192820_193324_-|tetratricopeptide-repeat-protein	gnl|CDD|315378	pfam12688, TPR_5, Tetratrico peptide repeat. BH0479 of Bacillus halodurans is a hypothetical protein which contains a tetratrico peptide repeat (TPR) structural motif. The TPR motif is often involved in mediating protein-protein interactions. This protein is likely to function as a dimer. The first 48 amino acids are not present in the clone construct. This Pfam entry includes tetratricopeptide-like repeats not detected by the pfam00515, pfam07719, pfam07720 and pfam07221 models.	2.06402e-16
NZ_CP029195.1|WP_150500134.1|189323_189641_+|cupin	gnl|CDD|380358	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain. This family includes prokaryotic and archaeal proteins homologous to HP0902, a functionally uncharacterized protein from Helicobacter pylori and Spy1581, a protein of unknown function from Streptococcus pyogenes. These proteins demonstrate all-beta cupin folds that cannot bind metal ions due to the absence of a metal-binding histidine that is conserved in many metallo-cupins. HP0902 is able to bind bacterial endotoxin lipopolysaccharides (LPS) through its surface-exposed loops, where metal-binding sites are usually found in other metallo-cupins, and thus may have a putative role in H. pylori pathogenicity.	2.43085e-11
NZ_CP029195.1|WP_015038477.1|184955_185540_+|TMEM165/GDT1-family-protein	gnl|CDD|225030	COG2119, COG2119, Predicted membrane protein [Function unknown].	2.42681e-21
NZ_CP029195.1|WP_015038484.1|176976_177189_+|DNA-binding-protein	gnl|CDD|181104	PRK07758, PRK07758, hypothetical protein; Provisional.	9.37518e-07
NZ_CP029195.1|WP_150500118.1|177886_179071_-|alpha/beta-hydrolase	gnl|CDD|226651	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only].	5.05329e-08
NZ_CP029195.1|WP_150500140.1|191877_192750_+|TSUP-family-transporter	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.62971e-34
NZ_CP029195.1|WP_150500136.1|189734_191123_+|MBL-fold-metallo-hydrolase	gnl|CDD|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	5.16653e-75
NZ_CP029195.1|WP_150500116.1|177262_177847_+|nucleoside-phosphorylase	gnl|CDD|235538	PRK05634, PRK05634, nucleosidase; Provisional.	6.47331e-76
NZ_CP029195.1|WP_015038488.1|173331_173847_+|PaaI-family-thioesterase	gnl|CDD|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	6.36e-34
NZ_CP029195.1|WP_015038489.1|172745_173219_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.43193e-33
NZ_CP029195.1|WP_150500130.1|187042_187978_-|LysR-family-transcriptional-regulator	gnl|CDD|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.83228e-32
NZ_CP029195.1|WP_150508111.1|175404_176793_+|VWA-domain-containing-protein	gnl|CDD|226082	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only].	7.91269e-46
NZ_CP029195.1|WP_051025990.1|173879_174212_-|hypothetical-protein	gnl|CDD|375228	pfam17648, DUF5519, Family of unknown function (DUF5519). This is a family of unknown function.	1.29253e-22
NZ_CP029195.1|WP_150500128.1|185716_187012_+|amidohydrolase	gnl|CDD|349917	cd05667, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins that have been predicted as N-acyl-L-amino acid amidohydrolase (amaA), thermostable carboxypeptidase (cpsA-1, cpsA-2 in Sulfolobus solfataricus) and abgB (aminobenzoyl-glutamate utilization protein B), and generally are involved in the urea cycle and metabolism of amino groups. Aminoacylases 1 (ACY1s) comprise a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and is a highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	1.13584e-124
NZ_CP029195.1|WP_150500126.1|184025_184637_-|TetR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.37515e-11
NZ_CP029195.1|WP_150500122.1|181391_182504_-|SpoIIE-family-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.34708e-34
NZ_CP029195.1|WP_150500120.1|179263_181327_-|hypothetical-protein	gnl|CDD|273375	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c., putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases. [Unknown function, Enzymes of unknown specificity].	1.57458e-14
NZ_CP029195.1|WP_150500113.1|174505_175375_+|AAA-domain-containing-protein	gnl|CDD|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.74149e-42

Protein sequences

>NZ_CP029195.1|WP_150500122.1|181391_182504_-|SpoIIE-family-protein-phosphatase
MPAGQRGRPDTPARTQLNIGRALPFLVLALTFVADLLTPDRERFDRLLVAAPTLAAVTWSVPGTIGIGVLAIGARLLLSVIRGESAAAPELVANLTVIAGVTAAAAWVSHVRTRYDQDLRELTAVAEVVQRVVLRPLPDRLGRYDLHLLYVAAAAKARIGGDFYEAVRIPGAVRIMLGDVQGKGLGAVETASVLLGSFRAAVNDAPDLARLADRLDEGLARYGAWDPDSDAAERFATVVLVELPDGEDTARLLSCGHPAPLLQRGAEVEPVPFTDPSLPVNLAGLADSHHRIEEVPFGPGDRLLLYTDGVSETRDKAGTFYPLELRLRGWAREPDTELPALLHKDLTRYGAGGLDDDVAALLVVYPPVPR
>NZ_CP029195.1|WP_150500120.1|179263_181327_-|hypothetical-protein
MRDTCAVRALWPLRRPYVRLATVRIADSHQPSREERVHVPQENPFTTGSSEHFPGFPDVTAPLTAAETSRITGRGLWAADGTVDPGAVRLGQTLANALLGATTDGSDGAAGTGTAEGVDTATALLPAELAAVVEEVRGLALPAYHRIEGASEGVRLSAFSLRRLDPGPHPLVVVPAGWTPFGWPLFLWSYLVLARKGYHVLAYTPRGLGIPGLPSTSSGRIDVAGPHDWADGSAVIDFAVDRFAPSAIGFMGESYGSGISQLVAAHDDRVAAVVALSTWGNLATSLYDHNTRHLAAVKALLALTGGPVESKFDEANQEILADFQADRNLDTVVEWGRLRAPESYLDLTNENGTPTFFSNTWHESLFAVNQTLETFNGLDVPKRLNMWIGDHAAPEGPALIGPPTVRGEVNQPMAEAYAWLDHHLKGERNGVEDWQEVCNQVMFTYVTEPVPDPETGEPTGENRIVREARRESSAGWSEVTRSTEVLGLTGDGAGGADGRLIPVGGGAPEEGESGWRRAFLAGVDTEATAMDAIMKTGQAEWRGNPKIYDTRKIDRRHALAWTTEPLVSPDGEAAPGRRIRGIPRLRLTVRSTATSASLYAHLLDVAEDDTARIISHEPLNVYGLTPDQDTTVSWNLQAAAYDIASGHRLMLVVDSKDPLYGDASVTWTQTVLSSPEGEPSFLELPLG
>NZ_CP029195.1|WP_150500118.1|177886_179071_-|alpha/beta-hydrolase
MIRFTRTAAAALLACSLALPAALATAAPAAAAPDTAFATAPLATRAALPAPTGPHSIGSTVLPLVDRSRTDPWVPSADGRELMVTLHYPAARHGGGRPAPYATPEETRLLTESLGTGAAVPADALARMRTHSRTDARPAPGRHPLVLLSPGFGGARWTVTHLAEELASRGYVVASVDHAYEAYGAAFPGGRTLTCVACTALDDGGVTGSLVTSTRAADMRFVLDRLTGPRPVWRHAGVIDARRVGMAGHSIGGASAATAMAADPRIDAGVNMDGSFWEELPAEGLRGRPFMMLGTHDGTHLPGGTDASWDRTWSRLDGWKRWVTVAGAEHLSFSDYPVIQDQFGLPGPDLPAARAVAVTRTYVTAFFDRHLRGLPRPILDGPSSANPEVHLQHR
>NZ_CP029195.1|WP_150500116.1|177262_177847_+|nucleoside-phosphorylase
MELLGEITADRPLLVLAVKEEAQYLDTALPVLLTGMGKVNAATSLATVLGRGPRPSGIVNLGTAGALRPGWTGTHVVGTVLQHDLDGELLATLTGETYGAPLSLPDGGDVVLATGDAFISDEASRARLAERAPLVDMEGYALAAAAELAGVPLRIVKHVSDEAGDGAARTWRDAVAECARALADWAAENTPYRS
>NZ_CP029195.1|WP_015038484.1|176976_177189_+|DNA-binding-protein
MATTGSDRPETEFPRAIGAPATRALAAAGYTRLDQLAGVPAAELAALHGVGPKALRVLGEVLAERGQALG
>NZ_CP029195.1|WP_150508111.1|175404_176793_+|VWA-domain-containing-protein
MAPATEPAGAVARLTGLVAALRDHGFGIGTGETVDAGRALEAVGFTDRERVREALAASLLHAELQRPVFDRVFDLYFPLGRADAPDEPYENTPAALAALRERLAEALTAGEGAALDRLAAEAVAGFGGFGSTPGSDGWSSYQTLSRLRPETLLARVRERLRAAPGPEDPEFTERLLDDEIRRRIEAFRERVRTEARRRVAERQGRDRVARRAVAGTADSVDFLLAGRAQLDELRRTVRPLARKLATRLAARRRRAARGEIDLRRTLRRSLSTGGVPVRPVLRRRPPRRPELVLLCDVSGSVAGFAQFTMLLVQALHDQFSRVRVFAFVNRVDEVTGLIARGAADPAGLGDRILSEAELTGWHGQSDYGTALGEFADRYAEALGPRSVVFVLGDARTNGADPNLAALRRIAGRARRVHWLNPEQPSLWGTGDSVAPAYAELVEMRPCRNARQLGALIGRLLPV
>NZ_CP029195.1|WP_150500113.1|174505_175375_+|AAA-domain-containing-protein
MTTGFFSSVDDVAERLATTGYLASPAVATTVFLADRLGKPLLVEGPAGVGKTELAKAVTEVTGADLVRLQCYEGVDESRALYEWNHAKQLLRITAGRGESWDETRTDIFGEEFLLPRPLLTAIRAERPTVLLIDETDKADVEVEGLLLEVLGDFQITVPELGTITAVRRPFTVLTSNASRELSEALRRRCLFLHIGFPEEELERRIVTLKVPGLDTALATSVVRVVGALRAMDLRKVPSVSETIDWARTLLALGADRLDEQVVRETMGVLLKHQEDIVRAAAKLDLEAV
>NZ_CP029195.1|WP_051025990.1|173879_174212_-|hypothetical-protein
MSWPSLTPARAHCGAAVGLGTATQEIVHFHSEHEADVHLTRAMVAKLRPALLGSSAVRLRAGSGWITVRLDMGSDIDLLATLVSAALQASGAPDVAPDGCTRTRPVPGDR
>NZ_CP029195.1|WP_015038488.1|173331_173847_+|PaaI-family-thioesterase
MGRTRTIEWEDAGATARAAGTMAGLDFLREMVAGRLPGPPIAALLGFGLDEVEDGRAVFVFEPGEEHYNPIGSVHGGVYATLLDSAAGCAVHSTLPLGTAYTSLDLSTRFLRPITMSTGKVRAIGTVISRGRRTALAEAGLYDAEDRLLAHATSTCMLFPVPGDGSGSTRA
>NZ_CP029195.1|WP_015038489.1|172745_173219_-|helix-turn-helix-transcriptional-regulator
MKWLETDTENCPVGRALDLVGEKWTLLILRDAFNGVRRYDEFRRHLGLSEAVLADRLRKLVAAGVLRAEPYREPGARTRYEYRLTAKGVDLWPVLLALKQWGDAHAGEPEGPVLDIRHTDCGAPVRVVVRCEGEEQATLGARDVTVRPGPAARPRRS
>NZ_CP029195.1|WP_150500126.1|184025_184637_-|TetR-family-transcriptional-regulator
MNDGPEDHQPGADDDGLRGRLVRAGVELVNTEGAQALSLREIARRTGVSHGAPRRHFPTHLDLLSAIARQGFAELAARVAEADPGSAAPRERVALLARVYLDYATDRRGMYELMFRHDLLESGRLGLRETSLPLFGRLTELVARARPDTPDPAVLAGALWANLHGIAQLWHWGSLPLVTGGDDPAPLLAAALDAHLGPAEPGR
>NZ_CP029195.1|WP_015038477.1|184955_185540_+|TMEM165/GDT1-family-protein
MHLDPLAILTAFGLIFLAELPDKTMFASLAMGTRMRPLYVWIGTSTAFLAHVAIAVGAGSLLGLLPGWSVKLVSALLFGFGAFMLLRGGGDDDEADEGGKTVTGFLPVFSTAFMAVFISEWGDLTQITTANLAATNGTWSTAIGSLAALMSVSALALVAGRFIAKRVPLKTVQRIGGICMAGLAIWSLTEVFTG
>NZ_CP029195.1|WP_150500128.1|185716_187012_+|amidohydrolase
MDTQAIHEELDKRAAEVADQVVAWRHHLHQHPELSNREVNTARLVADQLRALGLDEVRTGIAGHGVVGVLRGGAPGERVVALRADMDALPVRDACGADFASEVVDADYPGGPFPVSHACGHDCHTAALLGAATVLAGVRDRLPGTVLFVFQPAEEGPPVTERGGARAMVEAGAFDDPVPTMAFGLHVTPHPKGYVGYRVGNQYGASTLVHIVVTGKQTHGSTPWEGVDPMPAVGAVLTGIGQLYRQVSAFDPVTVSIGHVEDVGRFNIVGQTVTLWGTVRCAVESDMARVQQRLTTLAEHSAAAFGATATVEYLQPVPPVRNSGPWVEAGLPTFRRVVGPERVVETGATLGYDDVSELVGRFGGLYVMLGVQDATLDASGRPVPVAGGRGLVTNHNPHFYADDGTLVTGVRLHAHVAYDHLAGTLVPSDAA
>NZ_CP029195.1|WP_150500130.1|187042_187978_-|LysR-family-transcriptional-regulator
MKPALSQAQRSASRRRGPVLERYELETFLTLAEELHFGRTGERLGVSTGRVSQTVKKLERRFGTPLFVRTSRRVALTPVGRRLHEDLLPAYELMRAALERATEAGRGIHGRLRTGFGTPWGGELLTAAADTLIARHPGCEITVREVPLDGGVRLLQDGALDLQLTAFPVREPELTTGPVVLRDARVLLLPVAHPLAARASLGPEDLAGLPLITTEGANPRHWIDHHYPRRTPSGAVVGRGPVAATWQEVLSHVTAGRGAAPGAARGARYHPRPGIAYVPLHDVPPLEYGLVWPTAADSALLRAFVAAIGTA
>NZ_CP029195.1|WP_150500132.1|188052_189327_+|MFS-transporter
MTLPAPASPVADPVPDRPVNVLLFAVAGAVAVANIYFPQPLLAAVAESLDVTERTAGLIASAAQLGYALGILTLVPLADTARLRRLTSVLLVLTCAALLVGAAAPGVVTLTLATLALSTTTVLPQILTPVAAVLAGPGRRGRTVGLVGLGLTLGSTLSRTVSGAVADASGSWRVAYLVAAAATAALLCVLPRRLPERLGVRGPTSYAGLLAGLPGLLVAHRALRTSALLGACVFAAFSVFWAVLAFHLASPPLGYGPGAAGLFGVLTLPGALLSASAGSLTDRYGPRAVSAAGLVLAGLGLGAAGLAPYSPVALVAGANLLVVGVSSSQVANQARIFGIGTAVAARVNTVFMLATFGGGALGSLVGTWLYAEHGWPAALLAAGTFVAAGGVVVARSARPAAPSCVPDATRKAGGVRPRTPQGES
>NZ_CP029195.1|WP_150500134.1|189323_189641_+|cupin
MKLDLTALADEHMAAARTSPHGRSAHLIMHDGVLRQSVIALTAGTSLDEHNSPPAASLQVLRGRVNLTVAGRAEELPTGTLRMLTERHGVTALDDAVVLLTAVND
>NZ_CP029195.1|WP_150500136.1|189734_191123_+|MBL-fold-metallo-hydrolase
MIFHQYYLDCLSQASYLIADEKTGRAVVVDPRRDVSEYLADATARGLTVVGVINTHFHADFVAGHLELADQTGAWIGYGRRAETEYPIRPLTEGERISLGDVTLRIMETPGHTPESISVLVYEHPDDTVPYGVLTGDALFIGDVGRPDLLASVGVGAEELGAMLHDSVQNKLMGLPDAVRVFPAHGAGSACGKNLSTAKRSTIGEQRATNYACAPMGRAEFVALVTAGQPAAPGYFAYDAALNRRDRARYDATAAPRPLTLAEFTALRAARAVVVDTRDPREFAAGHLRGAVNVPADGRFAEQAGTVLDPAAELVVLAAQNREEEVVTRLARIGFDRVAGYLRNPEDALETLADEVSPASRVTATWLRTALGGDNPPVVVDVRTRGEREAHGLIEAALNIPLSELPARSGELPGDRPLVLHCAGGHRSSVAASLLRSRGFTDVSDILGGYAAWALSAEPASA
>NZ_CP029195.1|WP_150500138.1|191272_191881_+|DUF2892-domain-containing-protein
MSTTPTPIPAPIHAPIHGLTPAALHRLVQEGKAPRLLDVRTPAEFRTSHIPGSSNVPLDTLREHRAELVAHLDEDVVLVCRSGQRAAQAGRALTGTGLPNLRVLQGGIVAWEATGAPVNRGPERWDMERQVRLVAGSIVLTTGLVGVFVPGAHLIGTAVGAGLTYAALSNSCAMGVLLSRLPYNRGPRPDLRTVIAELRSTR
>NZ_CP029195.1|WP_150500140.1|191877_192750_+|TSUP-family-transporter
MTALAVAASVLVGMSLGVLGGGGSILTVPILVYLAGQDTKEAVGTSLFVVGVTSLAALVPHARALRVRWRTGLLFGAFSMAGAYGGGRLAEYVPGTALLVAFALMMLATAVAMLRRPRDGGEEARPAERDLPLRHIAAEGLAVGAVTGLVGSGGGFLLVPALAVLGGFPMGIAVGTSLLVIAMNSFAGLAGHLSGVGIDWRLALTVTAAAVAGGLVGGRLAGRVPQDALRPAFGWFVVAMGVFVLAQQLGTAAPSHPAVLSGLGVAVACVIALGLRRTRRAPRGPGPAES
>NZ_CP029195.1|WP_150500142.1|192820_193324_-|tetratricopeptide-repeat-protein
MEHHDEKDGRLAEAVALREKGEREEARERLVALAVEYPDDAEIAYQTAWAHDVLGLEAAAVPYYERALAGSGLDAEDRRGAFLGLGSTLRVLGRYEESVALLTGGVEEFPEDGSLRAFLAMALYNTGRHHESTRLLLRLLAATSDDPSVRRYRRAIEHYAEDLDAVE

Crispr_ID: NZ_CP029195_2

• CRISPR_ID: NZ_CP029195_2
• CRISPR_location: 330409-330535
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP029195_2

Consensus_repeat	Method
GAGCACCACCGGTTCGTTCCCGA	CRISPRCasFinder

spacers of NZ_CP029195_2

>2.1|330432|29|NZ_CP029195|CRISPRCasFinder
GGCGCACCCGACCAGCCCGTCCCCGACCT
>2.2|330484|29|NZ_CP029195|CRISPRCasFinder
GCCGAGCAGCACCGACGCCCGCCCGACGC

CRISPR arrays and Neighbor proteins around NZ_CP029195_2

CRISPR arrays

The CRISPR arrays of NZ_CP029195_2

>merge|NZ_CP029195|2|330409-330535|CRISPRCasFinder
CACCACCGCCGTCCCGTCCCCGAGGCGCACCCGACCAGCCCGTCCCCGACCTGAGCACCACCGGTTCGTTCCCGAGCCGAGCAGCACCGACGCCCGCCCGACGCGAGCCCCACCGGTTCGTTCCCGA

>NZ_CP029195|2|2|330409-330535|CRISPRCasFinder
CACCACCGCCGTCCCGTCCCCGA	GGCGCACCCGACCAGCCCGTCCCCGACCT
GAGCACCACCGGTTCGTTCCCGA	GCCGAGCAGCACCGACGCCCGCCCGACGC
GAGCCCCACCGGTTCGTTCCCGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150500299.1|331517_332768_+|hypothetical-protein	unknown	unknown	gnl|CDD|225208
NZ_CP029195.1|WP_150500291.1|325396_326191_+|glucose-1-phosphate-cytidylyltransferase	unknown	unknown	gnl|CDD|133015
NZ_CP029195.1|WP_150500284.1|322890_324168_+|glycosyltransferase	unknown	unknown	gnl|CDD|340831
NZ_CP029195.1|WP_150500311.1|338630_339869_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP029195.1|WP_150500280.1|318004_319972_+|heparinase	unknown	unknown	gnl|CDD|377945
NZ_CP029195.1|WP_150508117.1|335454_336585_-|alpha/beta-hydrolase	unknown	unknown	unknown
NZ_CP029195.1|WP_150500313.1|340170_341118_+|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl|CDD|224600
NZ_CP029195.1|WP_041663273.1|327851_329132_+|DUF4910-domain-containing-protein	unknown	unknown	gnl|CDD|374456
NZ_CP029195.1|WP_150508116.1|321623_322883_+|O-antigen-ligase-domain-containing-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150500305.1|334656_335412_-|phosphatase-PAP2-family-protein	unknown	unknown	gnl|CDD|239486
NZ_CP029195.1|WP_150500303.1|333323_334649_+|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl|CDD|180471
NZ_CP029195.1|WP_150500309.1|337899_338616_+|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP029195.1|WP_150500295.1|326838_327864_+|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|212494
NZ_CP029195.1|WP_150500282.1|319981_321610_+|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl|CDD|275079
NZ_CP029195.1|WP_150500307.1|336833_337649_-|trypsin-like-serine-protease	unknown	unknown	gnl|CDD|238113
NZ_CP029195.1|WP_150500278.1|315824_318008_+|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|176217
NZ_CP029195.1|WP_150500288.1|324164_325400_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|378005
NZ_CP029195.1|WP_150500301.1|332764_333316_+|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl|CDD|380337
NZ_CP029195.1|WP_150500293.1|326187_326835_+|PIG-L-family-deacetylase	unknown	unknown	gnl|CDD|225031
NZ_CP029195.1|WP_015038364.1|330573_331521_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|366154

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150500299.1|331517_332768_+|hypothetical-protein	gnl|CDD|225208	COG2327, WcaK, Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis].	5.95075e-42
NZ_CP029195.1|WP_150500291.1|325396_326191_+|glucose-1-phosphate-cytidylyltransferase	gnl|CDD|133015	cd02524, G1P_cytidylyltransferase, G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose. Alpha-D-Glucose-1-phosphate Cytidylyltransferase catalyzes the production of CDP-D-Glucose from alpha-D-Glucose-1-phosphate and MgCTP as substrate. CDP-D-Glucose is the precursor for synthesizing four of the five naturally occurring 3,6-dideoxy sugars-abequose (3,6-dideoxy-D-Xylo-hexose), ascarylose (3,6-dideoxy-L-arabino-hexose), paratose (3,6-dideoxy-D-ribohexose), and tyvelose (3,6-dideoxy-D-arabino-hexose. Deoxysugars are ubiquitous in nature where they function in a variety of biological processes, including cell adhesion, immune response, determination of ABO blood groups, fertilization, antibiotic function, and microbial pathogenicity.	2.85938e-120
NZ_CP029195.1|WP_150500284.1|322890_324168_+|glycosyltransferase	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.04235e-43
NZ_CP029195.1|WP_150500280.1|318004_319972_+|heparinase	gnl|CDD|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	5.72123e-43
NZ_CP029195.1|WP_150500313.1|340170_341118_+|D-alanyl-D-alanine-carboxypeptidase	gnl|CDD|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	2.25097e-34
NZ_CP029195.1|WP_041663273.1|327851_329132_+|DUF4910-domain-containing-protein	gnl|CDD|374456	pfam16254, DUF4910, Domain of unknown function (DUF4910).	0
NZ_CP029195.1|WP_150500311.1|338630_339869_+|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.00717e-31
NZ_CP029195.1|WP_150500305.1|334656_335412_-|phosphatase-PAP2-family-protein	gnl|CDD|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	4.11067e-20
NZ_CP029195.1|WP_150500303.1|333323_334649_+|glutamate-1-semialdehyde-2,1-aminomutase	gnl|CDD|180471	PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase; Provisional.	0
NZ_CP029195.1|WP_150500309.1|337899_338616_+|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.80341e-78
NZ_CP029195.1|WP_150500295.1|326838_327864_+|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|212494	cd08946, SDR_e, extended (e) SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.85452e-50
NZ_CP029195.1|WP_150500282.1|319981_321610_+|right-handed-parallel-beta-helix-repeat-containing-protein	gnl|CDD|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	2.70707e-12
NZ_CP029195.1|WP_150500307.1|336833_337649_-|trypsin-like-serine-protease	gnl|CDD|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	1.97617e-46
NZ_CP029195.1|WP_150500278.1|315824_318008_+|zinc-binding-dehydrogenase	gnl|CDD|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	2.07197e-80
NZ_CP029195.1|WP_150500288.1|324164_325400_+|methyltransferase-domain-containing-protein	gnl|CDD|378005	pfam08484, Methyltransf_14, C-methyltransferase C-terminal domain. This domain is found in bacterial C-methyltransferase proteins. This domain is found C-terminal to methyltransferase domains such as pfam08241 or pfam08242. But this domain is not a methyltransferase.	1.79442e-91
NZ_CP029195.1|WP_150500301.1|332764_333316_+|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl|CDD|380337	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production. RmlC (deoxythymidine diphosphate (dTDP)-4-keto-6-deoxy-D-hexulose 3, 5-epimerase or dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase; also known as RfbC) is a carbohydrate epimerase involved in the production of dTDP-L-rhamnose, a precursor of the bacterial cell wall constituent, L-rhamnose. L-Rhamnose (6-deoxy-l-mannose) plays an important role in the cell-wall structure of many bacterial species. It has been found to contribute to the virulence of several species, including the Gram-negative Salmonella enterica and Vibrio cholerae, where it is present as a part of the O-antigen, and is essential for the growth of Gram-positive bacteria such as Streptococcus pyogenes. RmlC converts dTDP-6-deoxy-D-xylo-4-hexulose to dTDP-6-deoxy-L-xylo-hexulose by catalyzing the epimerization of the 5-methyl and 3-hydroxyl groups of hexulose, the third of four steps in the dTDP-L-rhamnose biosynthetic pathway. RmlC belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.24091e-78
NZ_CP029195.1|WP_150500293.1|326187_326835_+|PIG-L-family-deacetylase	gnl|CDD|225031	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown].	4.75469e-20
NZ_CP029195.1|WP_015038364.1|330573_331521_+|glycosyltransferase-family-2-protein	gnl|CDD|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	2.71808e-27

Protein sequences

>NZ_CP029195.1|WP_041663273.1|327851_329132_+|DUF4910-domain-containing-protein
MAPVTVGKDMHELVERLYPLCRSITGDGVRATLEIVGEYVPLQVHEVPTGTQVLDWTVPQEWNIRDAYVADAAGNRVIDFAASSLHVLGYSVPVSRTMPLSELREHLHTLPEHPRWVPYRTSYYTPEWGFCLAQETLDALPDGEYEVCVDSTLADGHLTYAEHVVPGQVSDEVIVSCHVCHPSLANDNLAGIAVATFLARALAEETPYYTYRFIYAPGTIGAITWLARNAERIEQVKHGLVLACAGDSGRLTYKQSRRGDAEIDRVLRHVLAASERPHHVTEFTPYGYDERQYCSPGFDLGVGSLSRTPYAGYPEYHTSADNPDFVSPEAMADTLAVCREAFAVLDRNRKYVNLSPYGEPQLGRRGLYDSLGGRSDAKQAQMAMLWVLSLSDGEHGLLDVAERSGLPFDTVAAAADALCEAGLIKA
>NZ_CP029195.1|WP_150500295.1|326838_327864_+|NAD-dependent-epimerase/dehydratase-family-protein
MRVLLTGHQGYLGTVMAPVLAAAGHEVVGLDSGLFADCVLGPPPADPAGHRVDLRDVTAEHVDGVDAVIHLGALSNDPLGSLAPDLTYDINHHASVRLARLARDAGVRRFLYASTCSVYGAAGGDELVSEDAPLRPVTPYAESKVRVEDDLHALADGDFTPVYMRNATAFGYSPRLRADIVLNNLVGHALLSGEVLVMSDGTPWRPLVHAADIARAFTAALTAPREAVHDRAFNIGSEVNNVTVAEIAGQVAEAVAGSKVVITGETGADPRSYRVDFARFRAAVPGFDCEWTVKRGALELADAYREFGLTREDFEQRFTRLAVLRAASESGAVDDTLRWRR
>NZ_CP029195.1|WP_150500293.1|326187_326835_+|PIG-L-family-deacetylase
MIRLGAGRLGRVVAVGAHCDDIAIGAGGTLLTMCRARPGLRVDALVLSGGGGEREDEERAALAAFCPDADLRLTVLKLPDGRLPAHWEEAKAAVEELRERSEPDVIVAPRTDDAHQDHRGLAQLMTTAFRDHLVLGYEIVKWDGDLGRPSAYQPLTPEIAEHKVRLLQEHYPSQRHRPWYDREAFLGLARIRGIECHARYAEAFAVTKLTLDLGD
>NZ_CP029195.1|WP_150500291.1|325396_326191_+|glucose-1-phosphate-cytidylyltransferase
MKVVLFCGGYGLRMRSGASDDIPKPMAMVGPRPLIWHVMRYYAYFGHKEFILCLGYGAHHIKNFFLNYEETTSNDFVLRGGRTELLSTDIADWTITFAQTGIESPIGERLRRVRHHLDGDEMFLANYADVLTDAPLPEMIDRFARRDAGASMMVVPPQSSFHCVELGEDGLVGGITAVSDMPLWENGGYFVLRQEVFDHIPENGDLVADGCAQLAKRGRLVAHQHRGFWKPTDTVKERAALDAAYVRGDRPWAVWERDEAGVRA
>NZ_CP029195.1|WP_150500288.1|324164_325400_+|methyltransferase-domain-containing-protein
MTRCRLCGSAALTGVVDLGATPPCESFLAADQLDLPEPAYPLHLRVCTDCWLAQIPPLITPEETFSEYAYFSSFSTSWVEHARVFVADAVERVGLGPDAFVVEVASNDGYLLRHVVDRGIRCLGVEPSVNVGAAARDAGVPTVTAFLGPETGSAVRAEHGPADLVVANNVYAHIPDVVGFTRGLRALVADDGWVSIEVQHLLTLIEENQYDTIYHEHFQYYTVASAIRALASGGLALVDVELLPTHGGSIRLWARPAEVAGEPTRRVADVLDREKAAGLQELSGYTEFSARVAKVRRDLLKFLIGAAERGETVVGYGAPGKGNTLLNHCGIRPDLLAYTVDRNPYKHGRFTPGTRIPILPPERIAEDRPDYVLVLPWNLRTELVEQLSFVHEWGGRLVFPIPELSIVEVTR
>NZ_CP029195.1|WP_150500284.1|322890_324168_+|glycosyltransferase
MHVLVVHNRYSSAQPSGENRVVDEEVGLLRAAGHRVDVFERRSDDIAARSLLGKVAVPLLVPWNPAVRTELAARLRAERPDVVHVHNVFPLLSPAVLAACADAGVPVVATLHNYTQVCPPGTLHRDGGQCTECVGSATSLPAVRHGCYRNSRLATVPLAVSLAVNRRRWWSGVERFFCISGAQRDILVRSGMPAERLAVKHNFVPDPGTRRTGPGEHVLFLGRLAEAKGVRLLMAAWDELSATGGVGVPLVIAGAGPLEPEVTAWAAGRDDVRLAGLWDPEECRRGVARSVAVVAPSLAMETFGLVVAEAMAAGVPSVAAGHGAFVELVEDGVTGLLHRPGDASSLASRIRRIAGDQDRNGAMGRAARLRYEQGFSPAVGLDRLVEGYRAAIAGRSGGGEAAPPVGKEHAGPRRDTRAGRDGGSR
>NZ_CP029195.1|WP_150508116.1|321623_322883_+|O-antigen-ligase-domain-containing-protein
MTSGAATAPPAAAPGPGGTPKAVGIVWALLGLNTLGSAGAKTVVPLPRSLIQMATMGALVAAFALALALNPRLRIRASAFLFLLTLLLVPSVIASVQPDVGFGALFRCTRLAVFVGTLWLLSHWWDGGLTFVRYHIRMYFAVLVLVAAGLAVAPGTAMPEYYGGRLVGALWPLTPPQIGQYAAIVIGLAVLLVLGRRTTAGSAAVVVVPSLVLLAMTHTRTATLGLLIGLVLAIGSLVLTSAAARRFFAWAVLCATVAAVAFSSALRAWFLRGQSQENFANLTGRAKVWDALLAEPRSTGEKVFGTGLGDKSFDGLPIDNSWLAVYDEQGLIGVVVVAALLVVIGGVALLRPPSLPRACAIFLISYCAISSYTEVGLGDASAYLLHLALAASLLVAPAPPAPLPVAEIPRRRIPRWARR
>NZ_CP029195.1|WP_150500282.1|319981_321610_+|right-handed-parallel-beta-helix-repeat-containing-protein
MGIRGRFGAWAVAPSAVALLVATGCTSAPDAPAGPSGAPSAAGTSASAGTTGASGAGASGAGASGAGASGGSGAPVTPVARVCDRAAAGPAKAPAGAVTVDPSVVGDLAAKTESSPPRTTFWLRPGTHRLGPDPYAQVVPKEGNRYLGAPGAVLDGEKVNQYAFGGTARDVTIRHLTVQRFVAPRDEGVVNHDMADAWVIEHTTVQDNSGAGLMAGARQRLRASCLRRNGQYGMNAYKTGDSLRGLLVEGNEIVGNNTDDWERRQPGCGCTGGIKFWAVDGADVRGNWVHDNRGAGLWADTNNNDFLVEGNVIEANDGAALMYETSYNAVVKNNTVRRNNWVEGRAYAKDGDTFPYATVYVSEAGGEPRVPARTDRIEIYGNVLEDNWNGITLWENADRFCNSPANTSTEYCTLLVKDTGRCARPAIASAPLYDDCRWRTQRVDIHGNRFVLDASVVGCGPECGRMAVLANEGTAPDWSPYKGRRVAEAITHRQGNRWHDNTYLGPWSFVAGDQSRTLDPERWRGLPYRQDEGSTFGPRAGG
>NZ_CP029195.1|WP_150500280.1|318004_319972_+|heparinase
MTMSAGWYLRRLSRMGPAEVGGRVGDAVRRRRWRSELPDCPRVTGARFTAVLPAGTVAGLPPDAVKRLVAEADRLMAGHAEYFGVDRDDLADPDWWYDPKTGRRAPWGYAFDVPYRNEEAVGDVKQIWELSRHQYLTVLAAAYAVTGDERYAERVAKHLRLWWAANAPLRGVHWVSGIELGIRLLSWVWVRRLLDGWPGAPGLFEENPVALKQIWYHQRWLAAFPSRGSSANNHVIAEAAGQFAAACAFGWFPSSARWRTDAMRSLERHLRSNTFGSGLNRELATEYHGLVLELGLAAVAEADAVGVAVPPSVRLVLLRMTDALAAIVDGRLRPPRQGDADDGHGLVVDGTGTDRWGSLLATGEAVFGRLDWWPAVTGTDVRTPLLASLVRPYGKGGAGSDAKRPATRPAHFADAGMTILRGPGEIWCRCDGGPHGFLSIAAHAHADALSVEVRHDGVDVLADPGTFCYHGQPEWRQYFRSTLGHNTLQWDGGDQSVSGGPFLWTRQARTRVLAADASGHAGGGTSRWCAEHDGYQRVVHRRRVELDSGSRELRVVDEVRGDQGAVRLAFHLGPAVSADLTGNRAVLTWSRDGEDRSAVLDLPAELSWRAHRGETRPPLGWYSPGFGRKEPATTLVGTGFAAGAAGFTTVLGFHG
>NZ_CP029195.1|WP_150500278.1|315824_318008_+|zinc-binding-dehydrogenase
MKQVVQNYKSGELAVLDVPVPGCKPGGVLVRTAYSLISTGTELMKVSEAGMSMLGKARSRPDQVAKVMQSVATNGMSATYQKVMGKLDSYTPLGYSLCGVVEQVGPGIDDVKVGDLVACAGNEHALHAELNWVPKNLYARVPDGLAPRHAAFGTVGSIAMQGVRQGEPQLGEVALVIGLGLIGQLVAQLLTASGVRVVGVDPDPERCALAERLGAAACGDPASSAVEAAVAELTDGHGVDQVYLAAGGGSNQPVELAARLCRDRGRVVDIGKCRLDLPWNAYYEKELDVRFSRSYGPGRYDPEYELEGRDYPIGYVRWTERRNLACFLDLMARGRVDVDPLVSHIADFDDAVETYRRLKDGDLKAVAVLFRYPERAEDAEVRPEVAVPAVRRGGGAPVPARSAAAPVRLAFVGAGNYATSMLLPHLARRDGVELSTVVTTTALSAANARRKFGFASATTDLDAVLGDPSVDAVFVVTRHSSHAELTRKALLAGKTVFVEKPLALTEDELAGVLAAVEESGNDRLQVGFNRRFAPLLQEARSRFGTRTGPASLRYLVNAGRLQHGSWYLQQGTEGSRFAGEGGHFIDTASWLLGADPVSVYATAPAGNDDLQVVLRYPDGSTATISYVTTGPAGFPKETLDLIADGRVLRLDDFVRASVHGGRRWVSSRLPQARNKGQNAELAAFVKAVRTGGPMPVPLESLVATTAATLAVRTALAGGAPVTLARAL
>NZ_CP029195.1|WP_015038364.1|330573_331521_+|glycosyltransferase-family-2-protein
MTAPPRLGIGLPVYNGEEYLAEALDALLGQTYEDFELVISDNASTDGTRDICRRYAAKDSRIRYIRLSRNIGAAPNHNYVFTQCRGELFKWASHDDLYARDLLRRCVDALDERPDVILAHADQAVIDGDGRVKVPYEYTLATDSPSAPERFRSMLFEPGGDDFYGVMRADVLRRVKPHDSYHHADRTFVSEIGLHGPFHQVPELLYFRRDHPTRAERANPSKRSRCVNLDPRRAGPLHPTPRLLAEYVWGFVAAIRRAPLSPADRRACYRHLAAWATSRARPGAGERVEDRAPVDPARYAVSLDAIVAGREGRRA
>NZ_CP029195.1|WP_150500299.1|331517_332768_+|hypothetical-protein
MRSRNGGPPRVGLFGLLGSGNLGNDGSMEAVLGYLRSAHPEAVVDAMCGGPEVVALRHRLPATRLHWYRGEYRTASRAGAVTGKGFGKLVDAVRTAAWVRRHEVVIVPGMGVLEATLPLRPWGFPYALFLLCASGRLFGTRVALAGVGAAPIGNPSTRALVRWSARLAAYRSYRDAPSRDALRAMGVDTTGDEVCPDLAFALPTPAARPPSGTPGTVCVGVMDFHGGDDDRARAEEIHRRYLEGTIRFVRALVEDGRPVRLLTGDEVDRTVVAAILDAVDSPLVTAAEPASLADLMKEMAAADSVVATRYHNLVCALKVGVPTLALSYAAKSDTLMAEFGLAAYRHPAREVDAERLLEQFRDLEKHAPELRRTLAERNLAAARRVEHQFTALTAALFVKAVPKTHPVPTHAPRETP
>NZ_CP029195.1|WP_150500301.1|332764_333316_+|dTDP-4-dehydrorhamnose-3,5-epimerase
MKATEVPEISGAFLFEPTPYADERGFFCRTFDADVVRSVGLDPDAFVQDSVSRSVRGVLRGLHLRSGAGEAKLVRCSYGRIFDVVVDLRADSPTYRNVATFELSGETQRTLYVPAGCAHGFQALTDTADTSYRIDRPHDPAEDVTIAFDDPELAIPWPLPATSMSPRDREAPRLAEALKQAER
>NZ_CP029195.1|WP_150500303.1|333323_334649_+|glutamate-1-semialdehyde-2,1-aminomutase
MDTEDFLLPRSREANARLHELIPGGAHTYAKGDDQYPEDLAPVISHGLGAHVWDVDGNRYVEYGSGLRSVSLGHAHPRVLEAVRREIDRGGNFVRPSVVEIEAAERFLATVPTAEMVKFAKNGSDVTTAAVRLARAVTGRPRVAVCGDHPFFSVDDWFIGTTPMSAGIPAATTELTVAFPYGDLAATEELLDRYRGEVACLILEPAGHTEPPPGYLAGLRELADRHGCVLVFDEMITGLRWSEAGAQGLYGVVPDLSTFGKALGNGFAVSALAGRRELMEWGGLRHAGDRVFLLSTTHGAETHALAAAIAVQTTYAEEGVTARLHALGERLAAGVREAAAGMGVGDHVVVRGRASNLVFATLDERGLPSQAYRTLFLRRLLAGGVLAPSFVVSSALDDADIDHTVDVVAQACAVYRKALDAGDPTPWLGGRPVKPVFRRSV
>NZ_CP029195.1|WP_150500305.1|334656_335412_-|phosphatase-PAP2-family-protein
MDRTRQGGRVGPSGRNGPETAPYRGPAAPGDRVPGRPARPALPPRLRGPLGLVSVLAALAALALGVLYADAGRPGTVDARLVAALDGVGPPGRQVALATDFLGEPVGAALLVAALVTGCLLLRRPRAAVLVVVGPGLAVTATKVLKHLVGRTIHGDGNLSYPSGHTAFLTALALAVALLVAGRPALGRTVGTVLVLAAALAAGAAMGWAQVVLSAHYPTDTLGGLCTALAVVPAAARLLDRAADAAGRARG
>NZ_CP029195.1|WP_150508117.1|335454_336585_-|alpha/beta-hydrolase
MSTAVLLVPQALAGSAAAAATPDAPTRRAEGVAAVTYDLGDQAYRLPGTGEPVEIAGTVHYPKDLGSTPRPLVVQLHGLHETCADRDAEAARDAAVRAGDWAAADAADRKLYSWPCAPGIRPLANDRGYDYLGEELARRGFVVVSVRANGINAASLWGDDNASARADLINKHLALWQRLGASGRGGLAGAFRDAATGKPRAVDFRHRVDLNRVGTMGHSRGGAGVTWQAADRHKAQWPAGVKVRAVLALAPAYNVMTEDMTAYEITGTPMSVIRGTCDGQVGPEALSFAADATARSTAGFHSAEIPGANHNYFNTRWSPESGEVAARDDASHDDAHPGRCTDPGGSTFHPQLTEAAQRGIGVAHAVAFFRRYLDRP
>NZ_CP029195.1|WP_150500307.1|336833_337649_-|trypsin-like-serine-protease
MFSLKSVGRRAARTTVVGALAAATCATLLAGSAGAIVNGTDSTERYPFMATIPESAPKYGVYDGNCGATLIHPRWVLTAAHCVTGDGLVLDGTVRIGSEARKSGGTVRAIERTVVHPGFVSGDGQGPNENDIALVRLDRPVTEKPIRIAERAGRPGTPTRVLGFGTTVDGELKFAERLQELETRRGAVGECAPGYAGRTRLCTISRVPGAMACRGDSGGPQLQKGRNGRWELIGATSGPGAPGVACSAGPGLYTDVPAYADWIRKTLGHHG
>NZ_CP029195.1|WP_150500309.1|337899_338616_+|response-regulator
MPLSESEPTPVTILLVEDDEVIRKSVAMALERYGYHMSVAGDGLTGLELFRAGQHDLLLLDVMLPALDGIGLCRRIRETSTAPILMMSARGDALDVVSGLEAGADDYVVKPVDTAVLVARIRSLLRRASAAAPPPAGPGAPDPAGLLVFGDLTIDPAALEVRRDGQEIALAPSELRLLLEFSAHPGIVLDRQTLLRNVWDYGWDGDTRVVDLCVQRLRRKIGADRIETVRGFGYKLRR
>NZ_CP029195.1|WP_150500311.1|338630_339869_+|HAMP-domain-containing-protein
MTPLRALLNLRSLRWKIVLLVGLACTAMALTVGVLVHESTLRRSMHEGAGKALAALDPVVREGTPTQPTALPDALLRQVRRDGTATLYDNRPPAPVFWAARTQDGQLYATRVDMTADLLTRQALDRHMWKYSLLTLGIVVPVTVLATELPARRLRRVARTARRITAGDLDARTETGRGGVDEIGEIGAVVDSMADSLQQRIATEQRFTADVAHELRTPLMGLVTSAGLLPEGEVTDMVRDRIGVLRDLIEDLLEISRLDAGAEEARFRPVVLAELVRESVARTGTTARVTADEPAVADTDPRRLDRIVANLAVNAHRHGAGPVEITVSGRTITVRDHGPGFPADLLADGPQRFRTGSAERGRGHGLGLTIARGQAAVIGAALSFANHPEDGGAVATLRLPAECRGASGVPGA
>NZ_CP029195.1|WP_150500313.1|340170_341118_+|D-alanyl-D-alanine-carboxypeptidase
MSLSPSHRNRVAGGALALLLLTGLGVAVAETVDGSATVPYPDGGRGRVVVDDGALPWPKGGQSAVALEGSGPVGTRGDGRPVPIASLTKVMTAHVILEEHPLKPGESGPMIEVDRQAAYEVGVGGESTVPLQAGRRYSQRQLLEMLLIPSGNNVARLLARWDSGTQEAFAEKMQRTAGGLGMKDSTYTGASGIEVTTTSTAADQLALARKAMRNAVFREIVGTRSVTVPGVGTITNTNPLLDTPGVVGIKTGSSTPAGGNLLWACEVRVGGATRLLVGAVMHQRADTTPSEGLREAVDSSRRLITGLRDSLTREG

Crispr_ID: NZ_CP029195_3

• CRISPR_ID: NZ_CP029195_3
• CRISPR_location: 2169453-2169643
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP029195_3

Consensus_repeat	Method
CGGCAGCACCCCAGCCGACGGCAGCACCC	CRISPRCasFinder

spacers of NZ_CP029195_3

>3.1|2169482|25|NZ_CP029195|CRISPRCasFinder
GGGCCGACGGCAGCACCCCAGCCGA
>3.2|2169536|25|NZ_CP029195|CRISPRCasFinder
CCGTCGGCGGCAGCACCCCGACACC
>3.3|2169590|25|NZ_CP029195|CRISPRCasFinder
CGACACCCGAAAGCCCCCCGGCCGA

CRISPR arrays and Neighbor proteins around NZ_CP029195_3

CRISPR arrays

The CRISPR arrays of NZ_CP029195_3

>merge|NZ_CP029195|3|2169453-2169643|CRISPRCasFinder
CGACAGCGCCCCAGCCGACGGCAGCACCCGGGCCGACGGCAGCACCCCAGCCGACGGCAGCACCCGGGCCCGGGGCAGCACCCCCGTCGGCGGCAGCACCCCGACACCCGGCAGCACCCCGGCCGACGGCAGCACCCCGACACCCGAAAGCCCCCCGGCCGACGGCAGCCCCCCGGCCGCCGGCAGCCCCC

>NZ_CP029195|3|3|2169453-2169643|CRISPRCasFinder
CGACAGCGCCCCAGCCGACGGCAGCACCC	GGGCCGACGGCAGCACCCCAGCCGA
CGGCAGCACCCGGGCCCGGGGCAGCACCC	CCGTCGGCGGCAGCACCCCGACACC
CGGCAGCACCCCGGCCGACGGCAGCACCC	CGACACCCGAAAGCCCCCCGGCCGA
CGGCAGCCCCCCGGCCGCCGGCAGCCCCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150502542.1|2159752_2160550_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224051
NZ_CP029195.1|WP_150502548.1|2165610_2166159_+|cysteine-dioxygenase	unknown	unknown	gnl|CDD|283616
NZ_CP029195.1|WP_150502563.1|2176392_2177061_+|response-regulator	unknown	unknown	gnl|CDD|225107
NZ_CP029195.1|WP_015036595.1|2179334_2180459_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|279875
NZ_CP029195.1|WP_150502554.1|2171001_2171394_+|VOC-family-protein	unknown	unknown	gnl|CDD|319924
NZ_CP029195.1|WP_150508231.1|2175145_2176396_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP029195.1|WP_150502544.1|2161546_2162221_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223836
NZ_CP029195.1|WP_150502565.1|2177230_2178529_+|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl|CDD|376587
NZ_CP029195.1|WP_150502567.1|2178545_2179325_+|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl|CDD|376764
NZ_CP029195.1|WP_150502556.1|2171427_2172987_-|IucA/IucC-family-siderophore-biosynthesis-protein	unknown	unknown	gnl|CDD|377237
NZ_CP029195.1|WP_071891532.1|2167378_2168524_-|recombinase-RecA	unknown	unknown	gnl|CDD|236476
NZ_CP029195.1|WP_150502550.1|2166807_2167374_-|recombination-regulator-RecX	unknown	unknown	gnl|CDD|234646
NZ_CP029195.1|WP_150162116.1|2160604_2161426_+|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270408
NZ_CP029195.1|WP_150502546.1|2162217_2163108_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|223836
NZ_CP029195.1|WP_150502552.1|2170259_2170820_+|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl|CDD|378696
NZ_CP029195.1|WP_150502558.1|2173028_2174693_+|IucA/IucC-family-siderophore-biosynthesis-protein	unknown	unknown	gnl|CDD|226715
NZ_CP029195.1|WP_071891533.1|2166149_2166563_+|sulfurtransferase	unknown	unknown	gnl|CDD|238724
NZ_CP029195.1|WP_015036615.1|2158765_2159479_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP029195.1|WP_150502540.1|2157316_2158747_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP029195.1|WP_150502560.1|2174689_2175040_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150502542.1|2159752_2160550_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	5.91704e-155
NZ_CP029195.1|WP_150502548.1|2165610_2166159_+|cysteine-dioxygenase	gnl|CDD|283616	pfam05995, CDO_I, Cysteine dioxygenase type I. Cysteine dioxygenase type I (EC:1.13.11.20) converts cysteine to cysteinesulphinic acid and is the rate-limiting step in sulphate production.	1.08609e-50
NZ_CP029195.1|WP_150502563.1|2176392_2177061_+|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.12866e-70
NZ_CP029195.1|WP_015036595.1|2179334_2180459_-|AI-2E-family-transporter	gnl|CDD|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	4.65752e-68
NZ_CP029195.1|WP_150502554.1|2171001_2171394_+|VOC-family-protein	gnl|CDD|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.80359e-43
NZ_CP029195.1|WP_150508231.1|2175145_2176396_+|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.86237e-45
NZ_CP029195.1|WP_150502544.1|2161546_2162221_+|ABC-transporter-permease-subunit	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	8.93906e-50
NZ_CP029195.1|WP_150502565.1|2177230_2178529_+|cytochrome-ubiquinol-oxidase-subunit-I	gnl|CDD|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	6.4978e-123
NZ_CP029195.1|WP_150502567.1|2178545_2179325_+|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl|CDD|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	2.03198e-34
NZ_CP029195.1|WP_150502556.1|2171427_2172987_-|IucA/IucC-family-siderophore-biosynthesis-protein	gnl|CDD|377237	pfam04183, IucA_IucC, IucA / IucC family. IucA and IucC catalyze discrete steps in biosynthesis of the siderophore aerobactin from N epsilon-acetyl-N epsilon-hydroxylysine and citrate. This family represents the N-terminal region. The C-terminal region appears to be related to iron transporter proteins.	8.53437e-29
NZ_CP029195.1|WP_071891532.1|2167378_2168524_-|recombinase-RecA	gnl|CDD|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP029195.1|WP_150502550.1|2166807_2167374_-|recombination-regulator-RecX	gnl|CDD|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	7.97966e-39
NZ_CP029195.1|WP_150162116.1|2160604_2161426_+|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270408	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold. This group includes periplasmic glutamate-binding domain GluB from Corynebacterium efficiens and its related proteins. The GluB domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.81436e-93
NZ_CP029195.1|WP_150502546.1|2162217_2163108_+|ABC-transporter-permease-subunit	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	6.9014e-55
NZ_CP029195.1|WP_150502552.1|2170259_2170820_+|CGNR-zinc-finger-domain-containing-protein	gnl|CDD|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	1.00141e-06
NZ_CP029195.1|WP_150502558.1|2173028_2174693_+|IucA/IucC-family-siderophore-biosynthesis-protein	gnl|CDD|226715	COG4264, RhbC, Siderophore synthetase component [Secondary metabolites biosynthesis, transport, and catabolism].	1.50544e-44
NZ_CP029195.1|WP_071891533.1|2166149_2166563_+|sulfurtransferase	gnl|CDD|238724	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.	5.09557e-18
NZ_CP029195.1|WP_015036615.1|2158765_2159479_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.3109e-80
NZ_CP029195.1|WP_150502540.1|2157316_2158747_-|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.90042e-47

Protein sequences

>NZ_CP029195.1|WP_071891532.1|2167378_2168524_-|recombinase-RecA
MEPMAGTDREKALDAALAQIERQFGKGAVMRMGDRTQEPIEVISTGSTALDIALGVGGLPRGRVVEIYGPESSGKTTLTLHAVANAQKAGGQVAFVDAEHALDPEYAKKLGVDIDNLILSQPDNGEQALEIVDMLVRSGALDLIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDIRRIETLKDGTDAVGNRTRVKVVKNKVAPPFKQAEFDILYGQGISREGGLIDMGVEHGFVRKAGAWYTYEGDQLGQGKENARNFLKDNPDLADEIERKIKEKLGVGVRPDAAKAEAATDAAAAADTAGTDDAAKSVPAPASKTAKATKATAVKS
>NZ_CP029195.1|WP_150502550.1|2166807_2167374_-|recombination-regulator-RecX
MTGRTEWPGDSSDSSRAGKELSPQDPAERARAICLRLLTGTPRTRKQLADALRKREIPDGVAEEVLSRFEDVGLIDDAAFAGAWVESRHHGRGLARRALARELRTKGVEPTLIQEAVEQLDSDQEEATARELVARKLRATRGLERDRRLRRLAGMLARKGYPEGMALRVVRQALEAEGEDTDGLDESF
>NZ_CP029195.1|WP_071891533.1|2166149_2166563_+|sulfurtransferase
MAVSEARVGIDELLERVRSGLDRIEPRAAYEAYEAGDALLVDTRYAALRERDGLIPGALVVERNELEWRLDPQGSHRAPEATDHDLRVVVLCNEGYASSLAVESLRRLGLHRATDLIGGFQAWKAAGLPVLLPAPRI
>NZ_CP029195.1|WP_150502548.1|2165610_2166159_+|cysteine-dioxygenase
MSQPAPAHPLNTPSDTPGGAPTSADLLDFVRRTAADRELVDSLPLDPEGRTWVRLEGPGGSEAWLIGWPPGTGTGWHDHAESVGAFATARGTLTENALAVRLPADGWKTLELADGLDRSRRLGEGRGRAFGRHHVHEVLNESADTHAVSVHAYYPPLPLIRRFSRTGAVLRLEQVERPEDWQ
>NZ_CP029195.1|WP_150502546.1|2162217_2163108_+|ABC-transporter-permease-subunit
MSSVLYDTPGPRAKRRNVLFTIVFLAVLALVAWWVLTALNDKNQLAADKWSPFVTDSRVWTTYLLPGLMETLKAAALSILIALPLGALLGIGRLSDHRWVRVPVGAVVEFFRAIPVLLLMMFAAALYREFTTVSSDFRPLYAVVTGLVLYNASVIAEIVRAGVLSLPRGQGDAAEALGMRKGQTMTYVLLPQAVTVMLPALVSQLVVIVKDTALGGALLGYAELLSQNRQITANYGANTIATFTVIALIYIVINAIVTHLAGRLERRLRRGKKSAAAAIPAQAGPADVKSDAISGA
>NZ_CP029195.1|WP_150502544.1|2161546_2162221_+|ABC-transporter-permease-subunit
MFDFLDSGQYDLLGAFWVTAKLALYSAIGSLIWGTALAAMRVSPVPLMRGFGTTYVNLVRNTPLTVVIVACSFGLDQTLGITLGADRSEDVGFRLAILGLIAYTGTFVCEALRSGINTVPPGQAEAARALGLNFVQVLTLVVLPQAFRAAVTPLANVLIALTKNTTVAAAIGAAEAAVLMKEMIENEADALFAVFAVFAFGFIVLTLPTGLFLGWAAKRLAVKR
>NZ_CP029195.1|WP_150162116.1|2160604_2161426_+|transporter-substrate-binding-domain-containing-protein
MKLRRTPAAAAAAVVLALTATACGGGSDSGSNGDKITVGIKFDQPGLGLKTPDGTYAGFDVDVAKYVAKELGFAEDKINWKQAPSAERENLIKNGDVKFVVASYSINEKRLKEVDFAGPYFVTHQDLLVRADDSSITKVEDLNSKKLCSVTGSTSAQNVKEKLAPKADLQQLGGYSECLTGLENKRVDALTTDASILAGYASQKEHQGKFKLAGLSMSNENYGIGIKKGDSELKGKINKALEKMVSDGTWDKLVKQHFGPSGYKNDPAPKIAG
>NZ_CP029195.1|WP_150502542.1|2159752_2160550_+|ATP-binding-cassette-domain-containing-protein
MSGESVSKSLSRGPEDTPRAADDLVVLSGVNKHFGALHVLQDIDLTISRGEVVVVIGPSGSGKSTLCRTINRLESIDSGTITIDGKPLPAEGKELARLRSDVGMVFQSFNLFAHKTVLENVMLGQVKVRKTEKKAAETKARALLDRVGVGTQADKYPAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPEMINEVLEVMQQLAQEGMTMVVVTHEMGFARSAANRVVFMADGRIVEQATPEEFFSNPRSDRAKDFLSKILHH
>NZ_CP029195.1|WP_015036615.1|2158765_2159479_-|response-regulator-transcription-factor
MRLLLVEDDDHVAAALSAILARHGFTVTHARNGEEALQAVLPTAQGERPSYGVILLDLGLPDQDGYQVCGRIRKLTTTPVIMVTARGDVRSRIHGLNLGADDYVVKPYDPGELLARIHAVSRRHAGTEETAATGTATDGTQLRLGPVTIELPTRRVSVDGESVPLTRKEFDLLALLAQRPGVVFRREQIISEVWRTSWEGTGRTLEVHVASLRSKLRMPALIETVRGVGYRLVAPAA
>NZ_CP029195.1|WP_150502540.1|2157316_2158747_-|HAMP-domain-containing-protein
MRTRLLPLLIVLMAGVLLALGFPLAASLAASEQQRVVVDRLDDAARFAALAQFVSETSPATDERSATLGGELASYHDVYGIRAGIFYRNNRSMAAAPDDWVVPYDGEGRRAFNEALLGRRSHNPPQVWPWQTHARLIIASPVVRDGDVVAVVVTDSPTGQLRMRILRGWVLIFAGEAAAMLVAVGAAVRLTGWVLRPVRILDSVTHDIATGRMNSRVAATGGPPELRRLALSFNEMADNVEEALEQQRAFVADASHQLRNPLAALLLRIELLALELPEGNEEIASVRTEGKRLAQVLDDLLDLALAEHTAAELRLTDVGALTAERVASWRPVAEDKGVLLTAECGAVTAWADPVALSSALDAVIDNALKFTPAGEEVTVTAAALPGGETVAVVVADHGPGLTDEELGRVGDRFWRSGRHQNVKGSGLGLSIARVLLTAGGGGVAFAPNEPHGLRVTVTVPRNQPPTRMDAGGFAGG
>NZ_CP029195.1|WP_150502552.1|2170259_2170820_+|CGNR-zinc-finger-domain-containing-protein
MSPPSDHRSARPSVLATARRTAALINALADDHPDPAGITDVLRAYGEPDPVELTTRDVTRMRAAAARLREVFAAEHPDAAAEALNRLLREHTGPLRLTTHGGSTPWHPHLDGDDDAPWDEWLLASSCMALAVLLWDHQRPPGRVCASPSCHDVFITQGAGPERRYCSRRCATRERVAAHRRSRPRP
>NZ_CP029195.1|WP_150502554.1|2171001_2171394_+|VOC-family-protein
MKIHLTSVFVDDQAKAEHFYTEILGFVKKHDVPVGGQDRWLTVVSAEELGGTELLLEPAGHPAVKAYRDALVQDGIPLAQFAVDDVRAEFARLRDLGVRFLQEPLEMGPVTTAVFDDTCGNLIQIATEPQ
>NZ_CP029195.1|WP_150502556.1|2171427_2172987_-|IucA/IucC-family-siderophore-biosynthesis-protein
MCRTTAERALAAELDTVRPDRTGAYAAGLPGARAAVLTRLWRGLVHEPFPWIAARTAEGEGVTLRLSDGRRLRGPRSDPWATAASVTGLRLDGVRYDHPAELVAALGVPGGGRLAAELDHSVASMALSRTAPRPTGPPVHPWDWEQRETDGHPYHPGCRSRPGFSVAEQLAYAPEHRPVVSLLLAPVEGAAVSGAWPRDLRDGSAVLIPVHPWQAAHVLAGRGGENGPGGSVGALRPGPDGHPLLSLRTLDLGDGGDQGDLGGLGGNTHVKTALTARLTSTVRDISAYTVTHAVATSDFLERLVPRLDGRLHITRTLAAAGARTADLAVLLRESPQVHADPAAGEQVVPVAALPGLLAGYARGERLDRVTEFARLALGVCLELLDLGVALEAHGQNLLAVVDAEGRTRRLVYRDLADIRISPARLARHGVPAPALSGRLLNDDPVALRRKVLGSVVTGALGPLAGDAATLGTILEAATRDLAPTPDLHALRTEPLPAKALTLMRLEPGGGDLWTGLPHP
>NZ_CP029195.1|WP_150502558.1|2173028_2174693_+|IucA/IucC-family-siderophore-biosynthesis-protein
MSMNALTRTADALAVTPLLNCLLREAADPAGEHDAAPAKPAGPATATATAPQTPGEPATATATPTPGEPATATATAAHAVHRLRVSGRLLRVRPGRHPSAPELWTGGAWRPLGHPDLVELAVEEMHASTGRANPALAAEMAASRTAVRAVLAARARVAPPEDTWLRSEQALVMGHPYHPAPKARLGGGPPAEWLRYAPEAYARFPLVLLGVREDAVVEDGDTKALDALGEAPPGYRLLPAHPWQLALSDRSTRVRAAFADGRLVRLGVTPRPARPTASVRTLHVPGDGGAADARNGEDMFLKFSLDVRITNDIRRMRRHELLHVRRTDPVVTAAFAAMDGPTAWLSDRGYRTVDGLFETCAVLVRDGLDRHLPPGATAVLAAALAEGFPGSPLDRITDPRAWWAAYLRCVVAPALEAYARFGVVVECHLQNTLVAVDERGIPVRSVFRDAEGAKTVPEMAPEAAWRRLVYCLVVNNLSELAGALAHRFPGSAPALWELARAEFERAGRRPELSGVQELLASPTVPGKANLLSRWLRAEGTAPHYIPVPNPLAQA
>NZ_CP029195.1|WP_150502560.1|2174689_2175040_-|hypothetical-protein
MMFGYADEWWVVLFVPVLLWVPFGPFVMGGLGVWCARRPGRWPRAWSVLSPLVPVGVSATAMLLPTDTWDETGHWDDVLGYFLVYVLGITVLPWLLGYGITRVVRGARARRERGEL
>NZ_CP029195.1|WP_150508231.1|2175145_2176396_+|sensor-histidine-kinase
MAGVVLVVVAVWTLVSARYASEPAARTVLGWALILVGCGALCFRRRQPVTVAVVTLLACVVYYPLSAQDGPLMIAFALALYTTAAEGRFAAALALAAVTLLAVGIGEIRQQPGHRQIDDTSLVMLAGWLISLVAVGRAQRTRMAYLHEVEQRALAAEREQEARARQSATEERLRIAREVHDVLGHSISLINVQSGAALHRLGKGPAPEAGLATATEALEAVKATSKDALRELRATLGVLRGADEPTPTAPSSSGLALLADLAERARSTGLDVRTEVTGRPVSLPPPVDLAAYRIVQESLTNVTRHAGASTVRVGLDWGADALRLRIADDGAGAREGRPLGSGIRGMAERARAFGGELTARNGDGGGFLVDARLPLPPPTGPTGPTGSTEPAGAAGPTGPTGPTAPTTPTTPEGDPR
>NZ_CP029195.1|WP_150502563.1|2176392_2177061_+|response-regulator
MIRVVLADDQTLVRAGFRSILSDEEDLEVVGEAADGEQAIALARELRPDVVLMDIRMPVLDGLEATRRITADERLEGVRVVILTTFDADDHVYGALRAGASGFLVKDTEPMELLHAVRVVARGDALIAPAVTRRLIAEFADRAERRPDPSPLLNALTEREREVLGLVGAGLSNDEIAGRLVLSPATAKTHVSRIMTKLAVRDRAQLVILAYESGMITPGWLA
>NZ_CP029195.1|WP_150502565.1|2177230_2178529_+|cytochrome-ubiquinol-oxidase-subunit-I
MNQDVLDLARLQFALTAGGHFLFVALTLGLASVVAVLQTRATFSRKPLDARMVRFWGQLYVINYAVGIVTGLVMEFQFGMAWSGLTHEAGNVLGASLAVETIVAFFVESTFLGLWIFGWHRLNRWAHLAAIWIVVLTAYLSAYWILVSNGFLNHPVGYGSEGGELVLDDPVAVLTNPSALLAFGHVVAGALLTAGFFMAGVSAYHLFRRTPEWEFFGRGLRVGVFLSAPALMVTAAFGGVQFAVLDSFQPMKSAVFRGQTAEIARVQAELTARFGPGDYVPSEAWTRGGALVMLIGFALMMYLCFAGVILAAFRKVVFRFRFWHLVLMAAVPLPYLAMIGGWVFRESGRQPWVVYGLLKTEDAVSDLSPGTMRLSLAVFTTVFVLLVALNAWLLTRHARRGPVDSGLGHDERPAEGDGGTPDPAEALPAPRY
>NZ_CP029195.1|WP_150502567.1|2178545_2179325_+|cytochrome-d-ubiquinol-oxidase-subunit-II
METLAIALLAFFAAGWSVLAGADLGTGMLTPWLGRSDRERRLVLASFAPFFLGNEVWLVATAGVLIGCFPSLEGELLSGQLPVLVALLTGWILRDAGLWSRGRGPGPRWRAGCDAAVTCGSWAVVLSWGWLLAALLTGRPYAPATGSTGLLTALAVAALFVAHGLGFAALRLTGPPYERARRLVGRAGRPWQPFALTAVLTGGLPLWAGAGLPLAGRAASPATLALLVPALLVVTPLLVAVQAWIWHAFRHRVTGPSYL
>NZ_CP029195.1|WP_015036595.1|2179334_2180459_-|AI-2E-family-transporter
MPRWLPRALVLALALYACFLLGSWAFHQLVGLLVNILLAFFLALAIEPAVGRMAARGMRRGLATFLVFFAVLIFGVGFVVLLGSMLAGQIVDMVENFPQYLDSLINWINENFHTDLSRVEVQDSVLSSEWLQKYVQNSAAGVLDVSATVLGGLFRLLTIFLFSFYFAADGPRLRRALCSVLPPARQTEVLRAWEIAVDKTGGYLYSRGLMALISGVAHFVLFEILGVPYAPALAVWVGLVSQFIPTIGTYLAGALPMLIAFTVNPWYALWVLGFVVVYQQFENYVLQPKLTSKTVDIHPAVAFGSVIAGTALLGAVGALIAIPAVATLQAFLGAYVKRYDVTDDPRVHGHRRYGEAVVARLQKALHHKKESPDS

Crispr_ID: NZ_CP029195_4

• CRISPR_ID: NZ_CP029195_4
• CRISPR_location: 2460017-2460132
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_4

Consensus_repeat	Method
ACATCGGCAGCATGCGGGACTTCTACAACGC	CRISPRCasFinder

spacers of NZ_CP029195_4

>4.1|2460048|54|NZ_CP029195|CRISPRCasFinder
GTCCGGCGCGGGCAGCGTGGGGAGGATGGGCCATGACCGGGAACGATGAATTCC

CRISPR arrays and Neighbor proteins around NZ_CP029195_4

CRISPR arrays

The CRISPR arrays of NZ_CP029195_4

>merge|NZ_CP029195|4|2460017-2460132|CRISPRCasFinder
ACATCGGCAGCATGCGGGACTTCTACAACGCGTCCGGCGCGGGCAGCGTGGGGAGGATGGGCCATGACCGGGAACGATGAATTCCACATCGGCAGCATGCGCGACTTCTACAACGC

>NZ_CP029195|4|4|2460017-2460132|CRISPRCasFinder
ACATCGGCAGCATGCGGGACTTCTACAACGC	GTCCGGCGCGGGCAGCGTGGGGAGGATGGGCCATGACCGGGAACGATGAATTCC
ACATCGGCAGCATGCGCGACTTCTACAACGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150502792.1|2446522_2447545_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381302
NZ_CP029195.1|WP_150502798.1|2452080_2452278_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502799.1|2452427_2453021_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|238923
NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NZ_CP029195.1|WP_041662892.1|2466503_2466737_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150508243.1|2445481_2446420_-|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl|CDD|240643
NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter	unknown	unknown	gnl|CDD|225272
NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|176189
NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl|CDD|274561
NZ_CP029195.1|WP_150502807.1|2458461_2459391_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein	unknown	unknown	gnl|CDD|378342
NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl|CDD|178810
NZ_CP029195.1|WP_150502819.1|2462895_2463138_+|DUF397-domain-containing-protein	unknown	unknown	gnl|CDD|377231
NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl|CDD|235489
NZ_CP029195.1|WP_150502796.1|2449022_2452073_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|226415
NZ_CP029195.1|WP_150502794.1|2447646_2448795_+|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl|CDD|369642

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150502792.1|2446522_2447545_+|aldo/keto-reductase	gnl|CDD|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	7.51461e-126
NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	9.99887e-20
NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.29328e-24
NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.55933e-103
NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.96204e-05
NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP029195.1|WP_150508243.1|2445481_2446420_-|2-hydroxyacid-dehydrogenase	gnl|CDD|240643	cd12166, 2-Hacid_dh_7, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	1.10267e-144
NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter	gnl|CDD|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	1.81398e-93
NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase	gnl|CDD|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.94632e-171
NZ_CP029195.1|WP_150502796.1|2449022_2452073_-|AAA-family-ATPase	gnl|CDD|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.03828e-39
NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	3.9666e-22
NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl|CDD|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	2.20028e-37
NZ_CP029195.1|WP_150502819.1|2462895_2463138_+|DUF397-domain-containing-protein	gnl|CDD|377231	pfam04149, DUF397, Domain of unknown function (DUF397). The function of this family is unknown.	8.18848e-18
NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl|CDD|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific	gnl|CDD|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0
NZ_CP029195.1|WP_150502794.1|2447646_2448795_+|PQQ-dependent-sugar-dehydrogenase	gnl|CDD|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	1.28128e-77

Protein sequences

>NZ_CP029195.1|WP_150502807.1|2458461_2459391_-|hypothetical-protein
MSIEPADYVARLRAQANDPGREEALRRDRTVRRRRIALAAGAGVLLLGGFGFWLADVTGERPPYEPYAPKTLYEASWPREWPYSENMPFRDSPAFDWESGADGIYVPQPMPSGEFTREEITAVLDDVKTLLVGTNLSEETLFGGSEPAAALALLDPRGAGDAVRKDLVTRFDPDEVYLHETGIRTRGTLTHELSAAGELVVRADYSFVYPLVSASAGREVLPGVPEVARISVRRQLTVTSRGGKLVLGAYASEVGNHDCSAPRDGYLHPLFAEGRWKAARAAEGPLVDPYGEKRVLPSGPGHCVTPTGT
>NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific
MSSEKSPELSRRRLLALGGGAVGVATAGSLLPPSLQAAMAAEPPAGGMSAVRHVVILMQENRSFDHYFGTLRGVRGFSDRNAIELPSGKPVFEQPAALGRTVLPFPIRGAAETQRKDLQYIGDLDHSWGGGGKAWHGGWMDGWVSAKTAATMAYYDRQDIPLHHELADTFTICDAYHSSIHTSTSPNRNHLWSGWTGFEADGSRAVTNAAYAEDTHPGYGWPTYAERLEAVGRSWKTYTEWENFTDNNIEFFTRFKKIARKALAKTGGHTFMESFYAAVRDTEDLTERTRLLGLLEEGVATLTDAERSLFERGLRRVESGTLADAFRADVAAGTLPEVSYLVPSAIDSEHPGSSSPVASAGLVYKVLDALGAHPDVWRHTVVLINYDENDGFFDHVPPPVPPADDPSGDAERWQGQPTGLGIRVPLLVVSPWSVGGYVCSETFDHTSVIRFLERLTGVREPNITPWRRTVTGDLTSAFDFQRTRRLPPVEQPGAIPPFTGRWRPQPPAVQRMPVQEPGVRPARPLPYQPDASATLAPGAVRVALSNRGKASAHFALYPYAGEFDLPQHRDVRGTGEWTVPVPGDHYRFTITGPNGFRREFEGPAAGGAELVSRIDHHDRDLHLTVRNTGPSALFFTVRPLGYVDEDDLDDWTRTVKVKPGKTRTLVHSAADAHGWYDVEVTAPGGFRRRLMGHIENGRASVSG
>NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter
MAAIARWCIRHRLVAVLLWLVALCGVGTAAALAGNAYSNDYEVPGTESGRATALLERGFHGLGGDSDTIVWHTDRGSVRADAVEKRMTAVLDQVADLPGIAAVTSPYGDTRGQVSEDGHTAYATVTFHEQADDIPEAQARALVDTAKAAEGDGLAVELGGSAVALTEAPGGHLAEIVGVAVAAVVLFLAFGSLAASALPIATALVSVGIAYSAIALLGHLMTVADFAPMLGLLVGLGVGIDYALFIVTRHRRGLKRGLSVAEAAETAVATTGRAVVFAGATVCIALLGMLILRLSFLNGVAIAASLTVVLTVAASVTFLPALLSFIGMRALSRRERRALAEHGPQPELPTGFAARWSAFVERHPKLLGLAAVVVMGVLALPTLSLHLGTSDQGNGAATATTRKAYDLIADGFGPGVNGPLTLVAGLDGADDRVALDQLPAALSATKGVASVSPVTYNGSGDTAFLTVVPESSPQSKATSELVDRIRTDVLPEAGTGTSLQVHVGGVTASYDDFAEIIVGKLPLFVGVVIALGCLLLLLAFRSIGIPLKAAAMNVAAVAAAFGVVVAIFQWGWGSELLGLGSAGPIEPFLPVIMVSVLFGLSMDYQVFLVSRMYEEWLETGDNRRAVRVGLAETSRVINSAAVIMISVFLAFVLSGDRVIAMFGIALAAAVALDAFVLRTLLVPALMHLLGGANWWLPKWLDRLLPRLSIEPPECREAADFRAAGVSPEAVVTRGKIPVQRVTAEAAAPAAAAEERNDDVRDTAG
>NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase
MFAIPLGDDGAELRPLEPSNAEEFLAHMDRGRAFVGEHIVLADVVTDLDSARSFLRSYAEKAASDTGRIYGIWADGTLVGGVLFRTFDAAHGIAEAGCWLEPSAAGKGLITRACRVIIDWAIEERGIHRVEWYASAKNEPSIAVARRLGMTREGVLREHYPHRGVRADTELWAVLAPEWRAAKTV
>NZ_CP029195.1|WP_150502799.1|2452427_2453021_-|hypothetical-protein
MPRMDTKTTTEKTDEGTDASGTAEEATAVALDKKATEPATEPIDADAAGDEDRDDADRDDEDEEPTAGAAPAPAGIGGAAAAVVSAALGAVALTGTWTGKVVSERETLLGQIKTSGTGTPAQQISEIYGDAWHSTALVNGVFALIALLVAVLVLVLPGRPAWVRAVAVAGAVLGGLGLLLSVGTYFDLFLSLPTAGS
>NZ_CP029195.1|WP_150502798.1|2452080_2452278_-|hypothetical-protein
MFEYELHRMNHAQLVREAAAERLAHQAAETAGATRGLRRLGRRGGGQDPEGRVSDGGRGRFVRAA
>NZ_CP029195.1|WP_150502796.1|2449022_2452073_-|AAA-family-ATPase
MSAHADLCAMLGAVETRSVSPVFVGRAGELTALTEALSRATAGEPQALLIGGEAGVGKTRLIEEFLDAACERGAVVALGGCVELGADGLPFAPFATALRSLHRRLPGELLAAAHGHETELARLLPELGDPGGQDSSDEDSTARLFELTVRLLERLAADRTIVLVLEDLHWADASTRHLLTYLLRTLRRGRIAVVASYRADDIHRRHPLRPLLAELDRLRTIRRIELARFSRTEVHRQLTGILAAEPDPGLVDEVFERSDGNAFFVEELVVSHEAGCAAGQLSDSLRDLLLVRVETLPEDAQRVARIVAEGGSTVEYGLLAAVARLSEDDLIEALRAAVGANILLAAPDGDGYRFRHSLVREAVSDDLLPGERSRLNRRYAEALEADPTLVRADERANRLATYWYHAHDPAKALPAVLAASVATRKRHAYAEQLSLLERAMELWDKAPAETRDSLRPIDYADAYPACGCDPDTTSLRFLDLLAEAAVAARLSGERERAAKICRTALRILDDENDPLRAAWFWTETARLQSNLGRGDGWPEIARAQELVKGLPPSAVHATVLVGAAGWGMLRNPGPEALAAAERAVEYARFVKNEPIELNARITLGTIMVSAGDTEDGLAAMHQARERTIALGQFHEATRAHINISSSLEALGRSREAVEIATTGIDLARSRGLVDSAGWIRANLSESLLSLGEWDRSKEEAEELLRSGASSTKPGGTALLQLAHLAAARGEPARAAEHLAEARTRYGTRDPIPQYTLPMAQVEIAIAAAEGRLADVRHQLAAMADAGFPPGTHRYGWPLVLTAVTAEADSRGLPAADEGRAEALDVVRRCVRGLAVQAPVWEAYSLQVSEELARAEGRDTAARWAEVVAAYEPVERPHQLARARHRLADALLVEGGRREEATALLREAHATAVRLGARPLREDVELLAARARLSLAAEKPPAAAEPGDDTFGLTPREQAVLGLVAAGRTNRQIAEELFISPKTASVHVSNILAKLGVSGRGEAAALAHRLHLLDPAL
>NZ_CP029195.1|WP_150502794.1|2447646_2448795_+|PQQ-dependent-sugar-dehydrogenase
MSRPTVVKALWGAAVLVLVAGCSSGGSEDRPGTAPPTSPPVTATAPASAGPSGSASAPAGGRVAVAGTLTEGLRSPWGLAELPGGDLLVSSRDERTITRIDGRTGAKTPLGEVPGVVPGGEGGLMGLAVRDGWVYAYLTAESDNRIVRMRYGGGDGDRLGAPQPVLTGIPKGLVHNGGRIAFGPDRMLYAGTGETGRTGLAQDRESLGGKILRMTPEGRPAPGNPFAGSVVYSYGHRNVQGIAWDDEGRLWAAEFGQNTWDELNLVEPGKNYGWPEAEGRAGEARFVDPVAQWPTSEASPSGIAYARGAIWMAGLRGQRLWRVPLSGAERSGDPGAFLSEEYGRLRTVLAGGGGRLWLVTSETDGRGTPGPGDDRILRLEVS
>NZ_CP029195.1|WP_150502792.1|2446522_2447545_+|aldo/keto-reductase
MERRTIGATALDVGAIGLGCMPMSWAYSRSEQRGDRSLRTVHAALDAGVSLLDTADMYGPFTNELLVGRVLKERRADAFVSTKCGLLVGDGGERRHVVADGRPGYVRRACDASLRRLQTDVIDLYQLHRADPEVPVEETWGAMAELVSAGKVRALGLCAVGARSARRGATGVGRDGYEGTIRQLERVQQVFPVAAVQAELSVWSQEALVRLLPWCVARGVGFLAAMPLGNGFLTGTLTPGGGFEPDDPRARHPRFTAEMMAANQPLVAGLRRVAARHGAEVTPAQVALAWVLGRGRHVVPVPGAKRERWAVENAAAAGLRLTAADLAEIAALPAPRGSWD
>NZ_CP029195.1|WP_150508243.1|2445481_2446420_-|2-hydroxyacid-dehydrogenase
MWLPIPADEIDDVPGPGESGLNYRFWDGGPEFPADPARCAFYVVPYMKGPEIAVRPLAAMTSVRIVQTLSAGIDHVTPGIDALPPGVALCNAKGVHEASTAELTLALILASLRGIPGFVRGQDAEEWRAGFYPALADKSVLIVGYGSIGAAIEDRLAPFECARVVRVARSARTTARGPVHPLAELPALLPQADVVVLSTPLTPETRHLADAGFLARMKDGALLVNVARGPVVDTAALLKEVETGRITAALDVTDPEPLPAGHPLWHAPGVLVSPHVGGSTSAFMPRAKRLIAGQLRRFAAGEEPVNVLLTTT
>NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase
MRAIQVYEVGGPEVLREAEVDQPRPGPGEAVVEVAASGVNFLDVYHREGRYTLPLPFTPGAEGAGTVVEVGPGVTDVAVGERVGWVEIPGTYAERAVVDASRLVPLPDDIDFETAAAVLLQGMTAHYLIKDAYPVQGGDTVLVHAAAGGMGLLLTQLITHLGGRVIGTTSTAAKAELAKRAGAAEVILSSAVDDLAAEVRQLNGGQGLPVVFDGVGAHTFDASLASLRPRGHLVLFGAASGAVPPFDPMRLAQGGSLTLIRPSLGDFIADRSELLRRAADVFEWVRSKALEVTVTGRYTLSEAAQAHSDLEARRTTGKLLVIPGAAADLPGLPGRSG
>NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein
MSDELPLFREAFYRRERRSVPLARDFARKALADWGLDARADDVLVCVSELATNALRHGVPPGRGYRLHLYLERPGPLRVEVHDSGDGTPAVREPSGESGRGLLLVGALADRWGVGARHPGKIVWCEFAPVEGGPAAFPDSP
>NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein
MQRGTNSRKKVPSWEVVGALLALYRKQAGMTQPQLASRACVALETLGSIEQGRRALRLGLAGELDGILNTGGALAVAVGKAPKKERFPAFAQEFIELEAQALSLCWYENVVVPGLLQTSEYARAVFDCLYPPITPQEAEDRMLDRLDRQRVFEQTPWPPMMSFLLNESILEQPIGGREVLRGQILHLREMAELPFLALQVIPKSRTRHAGLAGPMVLVETPAHEHVAYIEGQRVSFLIDDPDEVGILQAKYGMLRSQALTPEDTMGLLERLAGVT
>NZ_CP029195.1|WP_150502819.1|2462895_2463138_+|DUF397-domain-containing-protein
MSAAALSWFKSSYSSDEGGACLEVAYDWRKSSYSGDEGGACVEVAAHPAAVHVRDSKLGETSPVFTVSPTAWDAFVGTAN
>NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein
MCLVPVIRSSSPLSRRAARAGAVLLVASSLQLTTPATAEPAPDHPPLGAVFPLGDHSAPKTGSKELAPGVTYRVFTQGAANDVWTVWVRYDDGQEVTTGKTTATALAEKVRTAGYGDARVVPLDSPATADTYAQTFYGVHVGSYATATEAKALQEELKTKGFADSRTLYTAETNADSRGPWQIRVITVRPDAQVDLRTEHGTNVSGSETVRQLSAAAGALAAVNGTEFDIDSINNTAFMGHEGVPQGLYMKNNVLLGSSNNGRTALLLNAAGGGHRITEVKSRTWITAPDGTERDVDGVNRVAGQILGCGGVGDDFRKTASLGNVPRLDPWRNGICYDPNEIVVFRPEWGTTTPAPAKEWAGAPVTEVVMNGNWDVLSLRDAPGPIPAGGRVLQGIGKGREWLRTLKPGDRVTPHTTVTDTAGTPVTAPALSAVGAGTPALMRDGRVWLNPAANGMAHVACALPAPAGGCRPSGALTARHPRTLAGISPEGHLMLVTIDGRNPGTSVGVTLPEAARVMEWLGARDAVGLGSGGDTTLMVENTLYNRPRDQWSDTASHERAVSNAVVVVPRS
>NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTVTELLSYEAALAEYDPVMGLEVHVELGTKTKMFCGCSTELGAEPNSQTCPTCLGLPGSLPVVNAIGVESAIKIGLALHCEIAEWCRFARKNYFYPDMPKNFQTSQYDEPIAFNGYLDVQLEDGEVFRVEIERAHMEEDTGKSLHVGGATGRIHGASHSLLDYNRAGIPLIEIVTKPIEGAGERAPEVAKAYVAELRELIRALGVSEARMDKGQMRCDVNLSLRPHGTKTFGTRSETKNVNSLRSVERAARFEIQRHAAVLSSGGSIVQETRHFHEDDGSTTSGRIKDNAEDYRYFPEPDLVPVAPAREWVEELRGGLPELPRVRRNRLREEWAVSEQEMQSILNAGAVDAIVATTEAGADAASARKWWMGELARNANEKGVSLEELPITPADVARVSALVAGGDLNDKLARQVIEGVLAGEGTPDEVVEKRGLKVVSDDGALGTAVEEAIAGNAAIADKIRGGKVAAVGALVGAVMKATRGQADAAKVKDLILEKLGVSEG
>NZ_CP029195.1|WP_041662892.1|2466503_2466737_-|hypothetical-protein
MAKKAKNFKKSKTGVYVSLATTAFGAISVAKQAKLARNDHDMLRLIDSAVSAAAIVTGLAILYRELKRLGDDDVLLG
>NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTDNIIKLTAAEIAGKIAAGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRARGEKLGPLAGVPLALKDIFTTAGMPTTVGSKILEGWIPPYDATLVKNLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLTRIPGGSGGGSSAALAAYEAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHDPLDSTSIDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKSLGAEIVELDCPTFDLALSAYYLIAPSECSSNLARFDAMRYGLRVGDDGTRSAEDVTALTREAGFGDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITREFEKAFEDVDVIVSPTTPTTAFPIGERADDPMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAAVEAAFVEKWGHPLLEEAPSL
>NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPGITREEVAHLARLARLELKGEELDHFAGQLDDIIGAVARVSEVADQDVPPTSHPLPLTNVMRADEVRPSLTPEQALSGAPAQEQQRFKVPQILGED
>NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein
MEPTESAAPVPRPHGRVAPEGFTSRLPAAVVGIAAVVLVAGLQQALTTGHGLFPDGVTGWSLAVLTGLIVGHLVALGRDRWWGGTGSGAALTLAVLLLYGWVPAGLVSMTVVALVGAARRHRWRQGVLHGAADVLGVAVAALVLALFGDVPTVEQPWQPLDWTIGDLPEVVLAAATYLVVTRLLLWYTLAPQGRGLPTVARTALLRQGLVAVALLGIAPLICVVAASSPVLLPLFAVPLIALDSTLWIARARAEEQLRDPLTGLPNRQWLLERAWTALEEAEGEGARAALVLIDLDRFRSVNDTLGHLAGDRLLLQIAERLRLALPRGAEAARLGGDEFAVLLPTADSTTSAQRVARHLVAELSSPLDLDGLTLVLEASAGVAVFPDHALDAEGLLRRADVAMYQAKRDRTGVEVYESKRDSNTPDRLGLLGDLRRALDAGEVELHYQPKVQFDGQVAGLEALVRWVHPERGKVPPDEFIAIAESSGLMPHLTEYVLETALAQVARWRAQGLNVPVAVNVSPRDVHTPGFAGAVAARLARHGVPAGALQLEITEHVLLEDPQRAADTLNGLTGHGVKMSLDDFGTGYSSLVHLRRLPVSELKIDRSFVARLAVDTEDAEIVRCTVDLAHSLGLLVVAEGVEDDETWERLRDLGCDAVQGWLVAAAMPPGEATAWLLARGEHGWRRPADIAAELAVDHPSGQVVQ

Crispr_ID: NZ_CP029195_5

• CRISPR_ID: NZ_CP029195_5
• CRISPR_location: 2462929-2463014
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_5

Consensus_repeat	Method
AGCTACAGCAGCGACGAGGGCGGCGC	CRISPRCasFinder

spacers of NZ_CP029195_5

>5.1|2462955|34|NZ_CP029195|CRISPRCasFinder
CTGCCTCGAAGTCGCCTACGACTGGCGCAAGTCG

CRISPR arrays and Neighbor proteins around NZ_CP029195_5

CRISPR arrays

The CRISPR arrays of NZ_CP029195_5

>merge|NZ_CP029195|5|2462929-2463014|CRISPRCasFinder
AGCTACAGCAGCGACGAGGGCGGCGCCTGCCTCGAAGTCGCCTACGACTGGCGCAAGTCGAGCTACAGCGGCGACGAGGGCGGCGC

>NZ_CP029195|5|5|2462929-2463014|CRISPRCasFinder
AGCTACAGCAGCGACGAGGGCGGCGC	CTGCCTCGAAGTCGCCTACGACTGGCGCAAGTCG
AGCTACAGCGGCGACGAGGGCGGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_015036346.1|2474283_2474982_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181298
NZ_CP029195.1|WP_015036347.1|2473279_2474281_-|methionine-synthase	unknown	unknown	gnl|CDD|239426
NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP029195.1|WP_150502799.1|2452427_2453021_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502829.1|2474989_2475529_-|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|367590
NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|224584
NZ_CP029195.1|WP_150502827.1|2471083_2473264_-|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl|CDD|236137
NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|238923
NZ_CP029195.1|WP_150502809.1|2459550_2460096_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter	unknown	unknown	gnl|CDD|225272
NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|238045
NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase	unknown	unknown	gnl|CDD|176189
NZ_CP029195.1|WP_150502811.1|2460079_2460424_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502807.1|2458461_2459391_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein	unknown	unknown	gnl|CDD|378342
NZ_CP029195.1|WP_041662892.1|2466503_2466737_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl|CDD|178810
NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl|CDD|235489
NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl|CDD|274561

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_015036346.1|2474283_2474982_-|SDR-family-oxidoreductase	gnl|CDD|181298	PRK08219, PRK08219, SDR family oxidoreductase.	1.52991e-114
NZ_CP029195.1|WP_015036347.1|2473279_2474281_-|methionine-synthase	gnl|CDD|239426	cd03310, CIMS_like, CIMS - Cobalamine-independent methonine synthase, or MetE. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers both the N-and C-terminal barrel, and some single-barrel sequences, mostly from Archaea. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Side chains from both barrels contribute to the binding of the folate substrate.	1.02571e-66
NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	9.99887e-20
NZ_CP029195.1|WP_150502829.1|2474989_2475529_-|TIGR00730-family-Rossman-fold-protein	gnl|CDD|367590	pfam03641, Lysine_decarbox, Possible lysine decarboxylase. The members of this family share a highly conserved motif PGGXGTXXE that is probably functionally important. This family includes proteins annotated as lysine decarboxylases, although the evidence for this is not clear.	1.23622e-39
NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase	gnl|CDD|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.29328e-24
NZ_CP029195.1|WP_150502827.1|2471083_2473264_-|NAD-dependent-DNA-ligase-LigA	gnl|CDD|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein	gnl|CDD|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.55933e-103
NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter	gnl|CDD|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	1.81398e-93
NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.96204e-05
NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase	gnl|CDD|176189	cd05286, QOR2, Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	1.94632e-171
NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	3.9666e-22
NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl|CDD|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	2.20028e-37
NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl|CDD|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific	gnl|CDD|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0

Protein sequences

>NZ_CP029195.1|WP_150502817.1|2462071_2462899_+|helix-turn-helix-domain-containing-protein
MQRGTNSRKKVPSWEVVGALLALYRKQAGMTQPQLASRACVALETLGSIEQGRRALRLGLAGELDGILNTGGALAVAVGKAPKKERFPAFAQEFIELEAQALSLCWYENVVVPGLLQTSEYARAVFDCLYPPITPQEAEDRMLDRLDRQRVFEQTPWPPMMSFLLNESILEQPIGGREVLRGQILHLREMAELPFLALQVIPKSRTRHAGLAGPMVLVETPAHEHVAYIEGQRVSFLIDDPDEVGILQAKYGMLRSQALTPEDTMGLLERLAGVT
>NZ_CP029195.1|WP_150502815.1|2461532_2461958_-|ATP-binding-protein
MSDELPLFREAFYRRERRSVPLARDFARKALADWGLDARADDVLVCVSELATNALRHGVPPGRGYRLHLYLERPGPLRVEVHDSGDGTPAVREPSGESGRGLLLVGALADRWGVGARHPGKIVWCEFAPVEGGPAAFPDSP
>NZ_CP029195.1|WP_150502813.1|2460420_2461434_-|zinc-binding-dehydrogenase
MRAIQVYEVGGPEVLREAEVDQPRPGPGEAVVEVAASGVNFLDVYHREGRYTLPLPFTPGAEGAGTVVEVGPGVTDVAVGERVGWVEIPGTYAERAVVDASRLVPLPDDIDFETAAAVLLQGMTAHYLIKDAYPVQGGDTVLVHAAAGGMGLLLTQLITHLGGRVIGTTSTAAKAELAKRAGAAEVILSSAVDDLAAEVRQLNGGQGLPVVFDGVGAHTFDASLASLRPRGHLVLFGAASGAVPPFDPMRLAQGGSLTLIRPSLGDFIADRSELLRRAADVFEWVRSKALEVTVTGRYTLSEAAQAHSDLEARRTTGKLLVIPGAAADLPGLPGRSG
>NZ_CP029195.1|WP_150502811.1|2460079_2460424_+|hypothetical-protein
MTGNDEFHIGSMRDFYNASGDGAVGRIEYHQHCTDPQAVYEAVIRAIETLRTQVSAEDREVLDASLETIRQGDGAPPGAFRRALGTAAGVAALVGEVGAPVAEAVRQMLALLAG
>NZ_CP029195.1|WP_150502809.1|2459550_2460096_+|hypothetical-protein
MARRKVIRVEVSKRVLWIGASAYPLQNIARATTVSIKPQRARAVGNFVKAVLVVGLLLVAALALAQADELSRGDQELITRGAEVTAAVLVAAFLVRLIAVLSTRTYYALVVETSGNPLTLLAGVDRDEVHQLVRDIMRAIEDPAFTGFVKQMVTYNIGSMRDFYNASGAGSVGRMGHDRER
>NZ_CP029195.1|WP_150502807.1|2458461_2459391_-|hypothetical-protein
MSIEPADYVARLRAQANDPGREEALRRDRTVRRRRIALAAGAGVLLLGGFGFWLADVTGERPPYEPYAPKTLYEASWPREWPYSENMPFRDSPAFDWESGADGIYVPQPMPSGEFTREEITAVLDDVKTLLVGTNLSEETLFGGSEPAAALALLDPRGAGDAVRKDLVTRFDPDEVYLHETGIRTRGTLTHELSAAGELVVRADYSFVYPLVSASAGREVLPGVPEVARISVRRQLTVTSRGGKLVLGAYASEVGNHDCSAPRDGYLHPLFAEGRWKAARAAEGPLVDPYGEKRVLPSGPGHCVTPTGT
>NZ_CP029195.1|WP_150502805.1|2456078_2458190_-|phospholipase-C,-phosphocholine-specific
MSSEKSPELSRRRLLALGGGAVGVATAGSLLPPSLQAAMAAEPPAGGMSAVRHVVILMQENRSFDHYFGTLRGVRGFSDRNAIELPSGKPVFEQPAALGRTVLPFPIRGAAETQRKDLQYIGDLDHSWGGGGKAWHGGWMDGWVSAKTAATMAYYDRQDIPLHHELADTFTICDAYHSSIHTSTSPNRNHLWSGWTGFEADGSRAVTNAAYAEDTHPGYGWPTYAERLEAVGRSWKTYTEWENFTDNNIEFFTRFKKIARKALAKTGGHTFMESFYAAVRDTEDLTERTRLLGLLEEGVATLTDAERSLFERGLRRVESGTLADAFRADVAAGTLPEVSYLVPSAIDSEHPGSSSPVASAGLVYKVLDALGAHPDVWRHTVVLINYDENDGFFDHVPPPVPPADDPSGDAERWQGQPTGLGIRVPLLVVSPWSVGGYVCSETFDHTSVIRFLERLTGVREPNITPWRRTVTGDLTSAFDFQRTRRLPPVEQPGAIPPFTGRWRPQPPAVQRMPVQEPGVRPARPLPYQPDASATLAPGAVRVALSNRGKASAHFALYPYAGEFDLPQHRDVRGTGEWTVPVPGDHYRFTITGPNGFRREFEGPAAGGAELVSRIDHHDRDLHLTVRNTGPSALFFTVRPLGYVDEDDLDDWTRTVKVKPGKTRTLVHSAADAHGWYDVEVTAPGGFRRRLMGHIENGRASVSG
>NZ_CP029195.1|WP_150502803.1|2453595_2455890_-|MMPL-family-transporter
MAAIARWCIRHRLVAVLLWLVALCGVGTAAALAGNAYSNDYEVPGTESGRATALLERGFHGLGGDSDTIVWHTDRGSVRADAVEKRMTAVLDQVADLPGIAAVTSPYGDTRGQVSEDGHTAYATVTFHEQADDIPEAQARALVDTAKAAEGDGLAVELGGSAVALTEAPGGHLAEIVGVAVAAVVLFLAFGSLAASALPIATALVSVGIAYSAIALLGHLMTVADFAPMLGLLVGLGVGIDYALFIVTRHRRGLKRGLSVAEAAETAVATTGRAVVFAGATVCIALLGMLILRLSFLNGVAIAASLTVVLTVAASVTFLPALLSFIGMRALSRRERRALAEHGPQPELPTGFAARWSAFVERHPKLLGLAAVVVMGVLALPTLSLHLGTSDQGNGAATATTRKAYDLIADGFGPGVNGPLTLVAGLDGADDRVALDQLPAALSATKGVASVSPVTYNGSGDTAFLTVVPESSPQSKATSELVDRIRTDVLPEAGTGTSLQVHVGGVTASYDDFAEIIVGKLPLFVGVVIALGCLLLLLAFRSIGIPLKAAAMNVAAVAAAFGVVVAIFQWGWGSELLGLGSAGPIEPFLPVIMVSVLFGLSMDYQVFLVSRMYEEWLETGDNRRAVRVGLAETSRVINSAAVIMISVFLAFVLSGDRVIAMFGIALAAAVALDAFVLRTLLVPALMHLLGGANWWLPKWLDRLLPRLSIEPPECREAADFRAAGVSPEAVVTRGKIPVQRVTAEAAAPAAAAEERNDDVRDTAG
>NZ_CP029195.1|WP_150502801.1|2453060_2453618_-|GNAT-family-N-acetyltransferase
MFAIPLGDDGAELRPLEPSNAEEFLAHMDRGRAFVGEHIVLADVVTDLDSARSFLRSYAEKAASDTGRIYGIWADGTLVGGVLFRTFDAAHGIAEAGCWLEPSAAGKGLITRACRVIIDWAIEERGIHRVEWYASAKNEPSIAVARRLGMTREGVLREHYPHRGVRADTELWAVLAPEWRAAKTV
>NZ_CP029195.1|WP_150502799.1|2452427_2453021_-|hypothetical-protein
MPRMDTKTTTEKTDEGTDASGTAEEATAVALDKKATEPATEPIDADAAGDEDRDDADRDDEDEEPTAGAAPAPAGIGGAAAAVVSAALGAVALTGTWTGKVVSERETLLGQIKTSGTGTPAQQISEIYGDAWHSTALVNGVFALIALLVAVLVLVLPGRPAWVRAVAVAGAVLGGLGLLLSVGTYFDLFLSLPTAGS
>NZ_CP029195.1|WP_150502821.1|2463168_2464884_+|hypothetical-protein
MCLVPVIRSSSPLSRRAARAGAVLLVASSLQLTTPATAEPAPDHPPLGAVFPLGDHSAPKTGSKELAPGVTYRVFTQGAANDVWTVWVRYDDGQEVTTGKTTATALAEKVRTAGYGDARVVPLDSPATADTYAQTFYGVHVGSYATATEAKALQEELKTKGFADSRTLYTAETNADSRGPWQIRVITVRPDAQVDLRTEHGTNVSGSETVRQLSAAAGALAAVNGTEFDIDSINNTAFMGHEGVPQGLYMKNNVLLGSSNNGRTALLLNAAGGGHRITEVKSRTWITAPDGTERDVDGVNRVAGQILGCGGVGDDFRKTASLGNVPRLDPWRNGICYDPNEIVVFRPEWGTTTPAPAKEWAGAPVTEVVMNGNWDVLSLRDAPGPIPAGGRVLQGIGKGREWLRTLKPGDRVTPHTTVTDTAGTPVTAPALSAVGAGTPALMRDGRVWLNPAANGMAHVACALPAPAGGCRPSGALTARHPRTLAGISPEGHLMLVTIDGRNPGTSVGVTLPEAARVMEWLGARDAVGLGSGGDTTLMVENTLYNRPRDQWSDTASHERAVSNAVVVVPRS
>NZ_CP029195.1|WP_150502823.1|2464975_2466487_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MTVTELLSYEAALAEYDPVMGLEVHVELGTKTKMFCGCSTELGAEPNSQTCPTCLGLPGSLPVVNAIGVESAIKIGLALHCEIAEWCRFARKNYFYPDMPKNFQTSQYDEPIAFNGYLDVQLEDGEVFRVEIERAHMEEDTGKSLHVGGATGRIHGASHSLLDYNRAGIPLIEIVTKPIEGAGERAPEVAKAYVAELRELIRALGVSEARMDKGQMRCDVNLSLRPHGTKTFGTRSETKNVNSLRSVERAARFEIQRHAAVLSSGGSIVQETRHFHEDDGSTTSGRIKDNAEDYRYFPEPDLVPVAPAREWVEELRGGLPELPRVRRNRLREEWAVSEQEMQSILNAGAVDAIVATTEAGADAASARKWWMGELARNANEKGVSLEELPITPADVARVSALVAGGDLNDKLARQVIEGVLAGEGTPDEVVEKRGLKVVSDDGALGTAVEEAIAGNAAIADKIRGGKVAAVGALVGAVMKATRGQADAAKVKDLILEKLGVSEG
>NZ_CP029195.1|WP_041662892.1|2466503_2466737_-|hypothetical-protein
MAKKAKNFKKSKTGVYVSLATTAFGAISVAKQAKLARNDHDMLRLIDSAVSAAAIVTGLAILYRELKRLGDDDVLLG
>NZ_CP029195.1|WP_015036351.1|2466742_2468239_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MTDNIIKLTAAEIAGKIAAGELTAVEVTEAHLARIEAVDEKVHAFLHVDREGALAQARAVDEKRARGEKLGPLAGVPLALKDIFTTAGMPTTVGSKILEGWIPPYDATLVKNLKAADVVILGKTNMDEFAMGSSTENSAYGPTGNPWDLTRIPGGSGGGSSAALAAYEAPLAIGTDTGGSIRQPAAVTGTVGVKPTYGGVSRYGMVAFSSSLDQGGPCARTVLDAALLHEAIAGHDPLDSTSIDAPVPPVVEAARNGSVAGMRVGVVKQFRGEGYQAGVVQRFDESVELLKSLGAEIVELDCPTFDLALSAYYLIAPSECSSNLARFDAMRYGLRVGDDGTRSAEDVTALTREAGFGDEVKRRIILGTYALSSGYYDAYYGSAQKVRTLITREFEKAFEDVDVIVSPTTPTTAFPIGERADDPMAMYLADLCTIPTNLAGNAAMSLPCGLAPEDGLPVGLQIIAPAMKDDRLYKVGAAVEAAFVEKWGHPLLEEAPSL
>NZ_CP029195.1|WP_015036350.1|2468244_2468541_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPGITREEVAHLARLARLELKGEELDHFAGQLDDIIGAVARVSEVADQDVPPTSHPLPLTNVMRADEVRPSLTPEQALSGAPAQEQQRFKVPQILGED
>NZ_CP029195.1|WP_150502825.1|2468647_2470762_-|EAL-domain-containing-protein
MEPTESAAPVPRPHGRVAPEGFTSRLPAAVVGIAAVVLVAGLQQALTTGHGLFPDGVTGWSLAVLTGLIVGHLVALGRDRWWGGTGSGAALTLAVLLLYGWVPAGLVSMTVVALVGAARRHRWRQGVLHGAADVLGVAVAALVLALFGDVPTVEQPWQPLDWTIGDLPEVVLAAATYLVVTRLLLWYTLAPQGRGLPTVARTALLRQGLVAVALLGIAPLICVVAASSPVLLPLFAVPLIALDSTLWIARARAEEQLRDPLTGLPNRQWLLERAWTALEEAEGEGARAALVLIDLDRFRSVNDTLGHLAGDRLLLQIAERLRLALPRGAEAARLGGDEFAVLLPTADSTTSAQRVARHLVAELSSPLDLDGLTLVLEASAGVAVFPDHALDAEGLLRRADVAMYQAKRDRTGVEVYESKRDSNTPDRLGLLGDLRRALDAGEVELHYQPKVQFDGQVAGLEALVRWVHPERGKVPPDEFIAIAESSGLMPHLTEYVLETALAQVARWRAQGLNVPVAVNVSPRDVHTPGFAGAVAARLARHGVPAGALQLEITEHVLLEDPQRAADTLNGLTGHGVKMSLDDFGTGYSSLVHLRRLPVSELKIDRSFVARLAVDTEDAEIVRCTVDLAHSLGLLVVAEGVEDDETWERLRDLGCDAVQGWLVAAAMPPGEATAWLLARGEHGWRRPADIAAELAVDHPSGQVVQ
>NZ_CP029195.1|WP_150502827.1|2471083_2473264_-|NAD-dependent-DNA-ligase-LigA
MAVEQGALPAEAREKHAELAEQIEEHRFRYYVKDQPVISDGEFDKLLRALEALEEEYPELRTPDSPTQKVAGQYETDFTSVEHRERMLSLDNAFDDEELATWADRVARDVGTPDFHYLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIADIPERLRGDRVPDLVEIRGEVYFPMEAFEGLNARLVEAGDKPFANPRNAAAGSLRQKDPKVTASRPLHMVVHGIGAREGFDISRLSDTYELLHEWGLPTARHNKVVGSLGEVREFIAYFGENRHSVEHEIDGVVVKLDEIPLQGRLGSTARAPRWAIAWKYAPEEVNTKLIDIKVGVGRTGRVTPYAQVEPVTVAGSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGSEREFVMPAECPECGTPLKAMKEGDIDLRCPNARTCPAQLRERLFFLAGRQCLDIENFGAVAAAALTRPLEPAEPPLVDEGDLFDLTIEQLLPIKAYVLDPDSGLPRRDPKTGEEKIVTVFANQKGEPKKNALAMLENIAAAKTRPLARFINGLSIRHVGPVAAEALAREFRSLERIEQASEEELAAVDGVGGIIAAAVKQWFSEEWHREIVRKWRAAGVSLEDEGAGEDVGPRPLEGLTVVVTGTLENFTRDGAKESLQSLGAKVTGSVSKKTSFVVVGENPGSKYDKAMQLKVPVLDEDGFKVLLEQGPEAAREAAVPVAE
>NZ_CP029195.1|WP_015036347.1|2473279_2474281_-|methionine-synthase
MGDDTKLFGSATGVGSLPGGDAREAAKTVTGSFEDFPFLAELPARGPGADMIGRTVGMLVDLYAHVEPSGWRISDRPGRDTKRARSWLGEDLDALEEFTQGYEGPLKVQAVGPWTLAAALELRGGEAALGDAGACRDLVGSLAEGLHGHLAELRKRIPGAELVLQLDEPSLTAVLRGHVRTASGYRTYRAVDRQVVESALREVVAVHDGPVVVHSCAPDVPFALLRRAGAAGVSFDFSLLTERDEEPIGEAVEAGTKLFAGVVPSTDTALSDPGGSVMGVRTLWRRLGLNPGTLAESVVVTPTCGLAGASPAYARAALAHCARAARSLADNPE
>NZ_CP029195.1|WP_015036346.1|2474283_2474982_-|SDR-family-oxidoreductase
MVTMATHVITGAGSGIGAAVARRLHARGDELVLHARDAGRAKELAGRFPGARTLVGDLADPDRLSWAFSHQSLPERVDGLLHIAGVVDLAPVGDLTPKTWHHQLNVNLIAPAELTRHFLPQLRVSQGHVVFVNSGAGLAAHAEWSAYAASKHGLKALADSLRHEEHGNGVRVTSVYPGRTASPMQAKVHQQEGKEYDPSRWIDPESVATAILTAIDLPRDAEINDLTVRPGR
>NZ_CP029195.1|WP_150502829.1|2474989_2475529_-|TIGR00730-family-Rossman-fold-protein
MNICVFLSAADLDERYTAPARDFARLLGKAGHTLVWGGSDTGLMKVVADGVEEAGGRLVGVSVDFLAHKARPGVDEMVVAKDLAERKALLLAKSDAIVVMVGGTGTLDEATEILELKKHGKHSKPVVVLNTAGFYDGLKDQFRRMEEEGFLPVPLVGLALFADDAPTALAHLEENIASR

Crispr_ID: NZ_CP029195_6

• CRISPR_ID: NZ_CP029195_6
• CRISPR_location: 3581039-3581115
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_6

Consensus_repeat	Method
TCATCGACGAGGCGCAGGACCTG	CRISPRCasFinder

spacers of NZ_CP029195_6

>6.1|3581062|31|NZ_CP029195|CRISPRCasFinder
GTGGAGCGGACGCACTCGCTCGGGCACGTGG

CRISPR arrays and Neighbor proteins around NZ_CP029195_6

CRISPR arrays

The CRISPR arrays of NZ_CP029195_6

>merge|NZ_CP029195|6|3581039-3581115|CRISPRCasFinder
TCATCGACGAGGCGCAGGACCTGGTGGAGCGGACGCACTCGCTCGGGCACGTGGTCCTCGACGAGGCGCAGGACCTG

>NZ_CP029195|6|6|3581039-3581115|CRISPRCasFinder
TCATCGACGAGGCGCAGGACCTG	GTGGAGCGGACGCACTCGCTCGGGCACGTGG
TCCTCGACGAGGCGCAGGACCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150503967.1|3581762_3582272_+|glyoxalase	unknown	unknown	gnl|CDD|319906
NZ_CP029195.1|WP_015035325.1|3577648_3579289_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223989
NZ_CP029195.1|WP_071891443.1|3569116_3569428_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150503955.1|3569415_3570042_-|HAD-hydrolase-like-protein	unknown	unknown	gnl|CDD|223620
NZ_CP029195.1|WP_150503963.1|3576937_3577516_-|Uma2-family-endonuclease	unknown	unknown	gnl|CDD|368559
NZ_CP029195.1|WP_150508305.1|3574390_3576883_+|DNA-binding-protein	unknown	unknown	gnl|CDD|379300
NZ_CP029195.1|WP_150503959.1|3572258_3573101_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224045
NZ_CP029195.1|WP_150503973.1|3586617_3588885_+|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319783
NZ_CP029195.1|WP_150503971.1|3584953_3585931_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015035316.1|3588922_3589204_+|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl|CDD|197385
NZ_CP029195.1|WP_041664095.1|3589374_3589764_+|BlaI/MecI/CopY-family-transcriptional-regulator	unknown	unknown	gnl|CDD|367747
NZ_CP029195.1|WP_150503961.1|3573205_3574285_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP029195.1|WP_041662733.1|3579301_3579490_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150503969.1|3582359_3582932_+|dihydrofolate-reductase-family-protein	unknown	unknown	gnl|CDD|334719
NZ_CP029195.1|WP_150503957.1|3571194_3572262_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|227119
NZ_CP029195.1|WP_015035318.1|3586115_3586400_+|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl|CDD|225328
NZ_CP029195.1|WP_015035320.1|3584212_3584902_-|copper-homeostasis-protein-CutC	unknown	unknown	gnl|CDD|281866
NZ_CP029195.1|WP_150503975.1|3589760_3590672_+|M48-family-metalloprotease	unknown	unknown	gnl|CDD|320685
NZ_CP029195.1|WP_150161445.1|3570193_3571198_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl|CDD|223682
NZ_CP029195.1|WP_150508306.1|3582928_3583753_-|phosphotransferase	unknown	unknown	gnl|CDD|270704

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150503967.1|3581762_3582272_+|glyoxalase	gnl|CDD|319906	cd07242, VOC_BsYqjT, vicinal oxygen chelate (VOC) family protein similar to Bacillus subtilis YqjT. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	7.6026e-39
NZ_CP029195.1|WP_150503959.1|3572258_3573101_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	6.70233e-132
NZ_CP029195.1|WP_150503955.1|3569415_3570042_-|HAD-hydrolase-like-protein	gnl|CDD|223620	COG0546, Gph, Predicted phosphatases [General function prediction only].	9.11061e-27
NZ_CP029195.1|WP_150508305.1|3574390_3576883_+|DNA-binding-protein	gnl|CDD|379300	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain. This domain family is found in a wide variety of helicases and helicase-related proteins.	1.96248e-40
NZ_CP029195.1|WP_150503963.1|3576937_3577516_-|Uma2-family-endonuclease	gnl|CDD|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.75901e-19
NZ_CP029195.1|WP_015035325.1|3577648_3579289_+|DEAD/DEAH-box-helicase	gnl|CDD|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	2.2161e-108
NZ_CP029195.1|WP_150503973.1|3586617_3588885_+|cadmium-translocating-P-type-ATPase	gnl|CDD|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP029195.1|WP_041664095.1|3589374_3589764_+|BlaI/MecI/CopY-family-transcriptional-regulator	gnl|CDD|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	4.55573e-27
NZ_CP029195.1|WP_150503961.1|3573205_3574285_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	9.88318e-05
NZ_CP029195.1|WP_150508306.1|3582928_3583753_-|phosphotransferase	gnl|CDD|270704	cd05155, APH_ChoK_like_1, Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase and Choline kinase. This subfamily is composed of uncharacterized bacterial proteins with similarity to APH and ChoK. Other APH/ChoK-like proteins include ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). These proteins catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.71692e-93
NZ_CP029195.1|WP_150503969.1|3582359_3582932_+|dihydrofolate-reductase-family-protein	gnl|CDD|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	1.0659e-31
NZ_CP029195.1|WP_150503957.1|3571194_3572262_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|227119	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism].	1.47965e-76
NZ_CP029195.1|WP_015035318.1|3586115_3586400_+|heavy-metal-associated-domain-containing-protein	gnl|CDD|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	5.74662e-14
NZ_CP029195.1|WP_015035320.1|3584212_3584902_-|copper-homeostasis-protein-CutC	gnl|CDD|281866	pfam03932, CutC, CutC family. Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length are found in both eukaryotes and bacteria.	7.03004e-25
NZ_CP029195.1|WP_150503975.1|3589760_3590672_+|M48-family-metalloprotease	gnl|CDD|320685	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase. This family contains peptidase M56, which includes zinc metalloprotease domain in MecR1 as well as BlaR1. MecR1 is a transmembrane beta-lactam sensor/signal transducer protein that regulates the expression of an altered penicillin-binding protein PBP2a, which resists inactivation by beta-lactam antibiotics, in methicillin-resistant Staphylococcus aureus (MRSA). BlaR1 regulates the inducible expression of a class A beta-lactamase that hydrolytically destroys certain ?-lactam antibiotics in MRSA. Both, MecR1 and BlaR1, are transmembrane proteins that consist of four transmembrane helices, a cytoplasmic zinc protease domain, and the soluble C-terminal extracellular sensor domain, and are highly similar in sequence and function. The signal for protein expression is transmitted by site-specific proteolytic cleavage of both the transducer, which auto-activates, and the repressor, which is inactivated, unblocking gene transcription. All members contain the zinc metalloprotease motif (HEXXH). Homologs of this peptidase domain are also found in a number of other bacterial genome sequences, most of which are as yet uncharacterized.	3.80747e-30
NZ_CP029195.1|WP_150161445.1|3570193_3571198_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl|CDD|223682	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism].	5.65865e-81
NZ_CP029195.1|WP_015035316.1|3588922_3589204_+|metal-sensitive-transcriptional-regulator	gnl|CDD|197385	cd10148, CsoR-like_DUF156, Transcriptional regulators CsoR (copper-sensitive operon repressor), RcnR, and FrmR, and related domains; this domain superfamily was previously known as DUF156. This superfamily includes various transcriptional regulators that respond to stressors including Cu(I), Ni(I), sulfite, and formaldehyde. It includes CsoR (copper-sensitive operon repressor) from Mycobacterium tuberculosis (MtCsoR), Bacillus subtilis (BsCsoR), Thermus thermophilus (TthCsoR), and Staphylococcus aureus (SaCsoR), Mycobacterium tuberculosis RicR (regulated in copper repressor, MtRicR), Escherichia coli RncR (formally known as YohL, nickel and cobalt-sensitive), Alcaligenes xylosoxidans NreA (nickel-sensitive), E. coli FrmR (formally known as YaiN, formaldehyde sensitive), and Staphylococcus aureus CstR (CsoR-like sulfur transferase repressor, NWMN_0026.5, SaCstR). CsoR is Cu(I)-inducible, and regulates the expression of genes involved in copper homeostasis. For example, TthCsoR binds the promoter region of the copZ-csoR-copA operon, and represses expression of these genes, which encode the copper chaperone CopZ, CsoR, and the copper efflux P-type ATPase CopA, respectively. In the presence of excess Cu(I), TthCsoR binds this ion, and is released from the DNA, allowing expression of the downstream genes. TthCsoR also senses other metal ions such as Cu(II), Zn(II), Ag(I), Cd(II) and Ni(II). CsoRs form a homotetramer (dimer of dimers). In the case of MtCsoR, two Cys residues on opposite subunits within each dimer, along with a His residue, bind the Cu(I) ion. These residues are conserved in the majority of members of this superfamily. Exceptions include the functionally uncharacterized Bacillus subtilis YrkD where there is an Asn instead of His (C-N-C), E.coli RcnR where there is a Thr instead of the second Cys (C-H-T), or TthCsoR and E.coli FrmR where there is a His instead of the second Cys and which have an additional N-terminal His (not found in those family members having C-H-C) that may also be involved in metal binding (H-C-H-H). A conserved Tyr and a Glu residue facilitate allosteric regulation of DNA binding. SaCstR regulates genes predicted to function in sulfur metabolism; it is thought that oxidation of the intersubunit Cys pair to a mixture of disulphide and trisulphide linkages by sulfite, results in a reduced affinity of SaCstR for the operator DNA. SaCstR exists as a mixture of oligomeric states, including dimers, tetramers and octamers. The sequence of SaCstR was not available at the time this hierarchy was curated and therefore was not included. Escherichia coli RncR represses expression of the gene encoding the nickel and cobalt-efflux protein RcnA. The gene encoding Alcaligenes xylosoxidans NreA is part of the nre nickel resistance locus located on the pTOM9 plasmid from thisbacteria. Escherichia coli FrmR regulates the formaldehyde degradation frmRAB operon.	1.99109e-29

Protein sequences

>NZ_CP029195.1|WP_041662733.1|3579301_3579490_-|hypothetical-protein
MTATTFTLVTTVPRPRVRPLGTALRALRAFGGAAAGVVLLGDYGPPRAGVRNPRPVYAPGPD
>NZ_CP029195.1|WP_015035325.1|3577648_3579289_+|DEAD/DEAH-box-helicase
MSGPLIVQSDKTLLLEVDHELADDCRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAGHDAEQVVDALVEYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTSTDRPVLEEILRSRKVQPLVGERIDPDTVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHRIDLAEDGWALRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHELVKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLIVYDEVHLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPADCVEVRVNLTDSERLAYATAEAEEKYRFCATTATKRKVTEALVKKFEGQQILVIGQYIDQLDELGEHLDAPVIKGETPNAQREKLFDAFRTGEISVLVVSKVANFSIDLPEATVAIQVSGTFGSRQEEAQRLGRVLRPKADGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDADELLGS
>NZ_CP029195.1|WP_150503963.1|3576937_3577516_-|Uma2-family-endonuclease
MSVAHDPHYGPWTIEEVLALPEDRGQRRELMGEALVMSPAPGTKHQRASSRLWSLLDRALQSEGVPAEVLEAVNLILPDGLFIPDIVVVEAAAAAENPVTYDADDVLLVVEIVSPSSSGRRTDRLLKPPYYAEAGIEHLWRLELEPVPTLVVCELQDGRYVERTVAEAGRTTPIEKPFPLEVDPAALVSPRT
>NZ_CP029195.1|WP_150508305.1|3574390_3576883_+|DNA-binding-protein
MPEVTGAAAAPRTLAEALRARGDEGLAALLRARPDLLNPVPNDLTQLATRAGTRGSVVRALERLDRFALQTAEALAVAPDPAPYPVLLGLLTGDEGDPEIEAALPGAVALLREQALVWGEDDRLRLVRTARELLAPSAQHPSPTGLGPTVAEATSGMSPGRVQEIIAAAGLSATHDAVSAVAALTGLFTDRARMGALLDTAPPEALAVLDRLVWGPPYGEVTAKPAAPVQWLRDHGLLLPVSPRTMVLPREVALHLRGGRAHRSPEPRAPEPAVLREYRPQVVDSAAAGQAQLALATVEELLKSWDRGGPPVLRAGGLAVRDLKRTAAALDVSEETAAFWLELCYGAGLLASDGEADERYAPTPAYDDWLDLPPAERWALLVTPWLSATRTPGLVGGQDAKGRALSALGPDLDRAPAPEVRHRVLGLLATLPPGSSVEPESLFARLRWERPLRGAAAAGDGDDLRSRLARWTLAEAELLGLTGRGALSGPARALLNLPLAEAASPGEPGGGVEPAVAAGRAATLLAPLLPEAVDHVLLQADLTAVAPGPLRRPLADALAVLADVESKGGATVYRFTPGSVRRALDSGQTATDLHEFLKAHARTPVPQPLTYLVDDVARRHGHLRVGAASAYVRCDDDTVLGEILADRRSSSLGLRRLAPTVLAAQTDPASLLEGLRSMGYAPAAESATGDVLITRADAYRTPARTAPVPVPDGPPAPDTTLLGAAVRAIRAGDRAATAVRKEPAAAPTAAGALPRTSAAETLATVQAAAMTGSAVWIGYVNAEGGASQRVIAPVRVEGGFVTAYDHTADEVRTYPLHRITGVAELADDQV
>NZ_CP029195.1|WP_150503961.1|3573205_3574285_-|hypothetical-protein
MGIESDQLVYDYLSRVGDLAQQRQLPASERMRLVSTLRNEIDRRRATYGEESPAAVRRILGTLGTPDEVVERAEGPGAPPAPSAPAPAPAPVPKPRKEGRPGRAAGWLPGSRRSREGSGKPKSAPRTPAPGASVSGAPAGADAPAASDLTGLDATGGLLDDTSDWWQQEDPAEGLPGFVGGVERPDLFEEPVPDEDEHEDGEGDEEDDAEAPPRGRRLARILLRRKPRAAAEAYGTEEEPDAAPVSRLRLANPFVLLAALLLLGGALFGSPVVLALGWLLAYGSRRLTPGEVKGAVLVIPGLAAASGVVWLWGRVEGRWGDPVGAGGEAMGAAVSETWPWALRGAAVASALFLIWRSRR
>NZ_CP029195.1|WP_150503959.1|3572258_3573101_+|ATP-binding-cassette-domain-containing-protein
MSRLTARELTLAYEDRTVVHELDLAIPDGKVTVIVGPNACGKSTTLRALGRLLRPAGGAVLLDGEELAKLPTKRIARSIGLLPQTPVAPEAITVADLVSRGRQPHQAWWKQWSEEDERAVTEAMDRTDVAALADRSVDELSGGQRQRVWIAMALAQETDLLLLDEPTTYLDISHQVEVLDLVRRLNRLRGRTVVVVLHDLNQAARYADHLVAMKAGRVVAEGPPSEIVTEQLVRDVFGLSSVVVSDPVTGSPLVVPGAPWEGVGAGAGAVTSAGTDTVKG
>NZ_CP029195.1|WP_150503957.1|3571194_3572262_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTAPTLVRPAGYGTVRAGRASFLVHRRSALVAVGLLLLLAASSVAYLCVGERFVGPSEVLRVLSGQPSPSAFVVAELREPRLVVALAVGAAFGVAGALIQTVARNPLASPDIIGISQGAGAVTVAAMTFGLTSYTVLPYLSIAGGVLAAALVYAFAWRGGLHATRFVLIGIGFAIALRSLTTLFMTKGDYLVAQQAQIWMTGSLNGRGWDESAPIRWTLLLMLPAVLWAARAQRTVSLDDDTATALGVRLGPVRLGLVAVGVVLASVATGVAGPVDFVALLAPQIARRMTRTAQIPLLCSALAGAVVVVLADLIGRRLFSPVELPVGVLTAAVGAPYLIWLIVRSRAAGSSGGKA
>NZ_CP029195.1|WP_150161445.1|3570193_3571198_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MPAAFRTRRVLATSAALVALLVAVLLSLAVGARAIAPTTVLDALLHGGTSPDAEVVRQLRVPRTVIGLMVGAALALAGTALQGITRNPIADPGILGISQGSSVGVVLAIAFFGVHTLTGYVWFAFAGAALAAVAVHAVASSGRGGATPVKLALGGAAINALLLSVTTGILTTRASALDEFRFWQIGSLDGRDAQIVGQIWPFLLVGAVLVVSVARGLDALALGEDVAKGLGQRVATVRIVGGVGATVLTGAGVAAAGPVAFVGLAVPHIARAVVGSDHRWVLPMAAIIGPVMLLVADVAGRIVFPPGEVPAGVMTALIGVPFLVTLVRRKAVPA
>NZ_CP029195.1|WP_150503955.1|3569415_3570042_-|HAD-hydrolase-like-protein
MTTSATRPPLTVGFDLDLTLIDTRPGIRAAWVAFSAESGVPVDADLVVSRLGPPLEHEMAYWVPEERVTEMVARYRALYPAYAIEPSAPMPGARDAIRAVREAGGRTIVVTAKNGPHAELHLAHLGIEPDAVVGGLWAEGKAEALRARGAQVYVGDHVGDVRGAATAGALSVAVATGPCAPEELKEAGADVVLPDLTDFRSWWEGYLA
>NZ_CP029195.1|WP_071891443.1|3569116_3569428_+|hypothetical-protein
MFLRPGNYPGRMRSETPAAPANDSAPGDGLIKAGVILFAVGAVATLVTVAPLFLGTDPFPTVAYTVSMLMGVGFAVAAAGVLRSIAAQRRQARSGSTGPVQAR
>NZ_CP029195.1|WP_150503967.1|3581762_3582272_+|glyoxalase
MSPAGALHHVEVWVGDLARAEDSFGWLLGALGYEPFQRWEGGRSWALGSFYLVVEQSPARTSDVHDRLRPGLNHLAFHAGDRTAVDALVAEAPAHGWRLLFADRHPYAGGEGVYAAYLENADGFEVELVAAPEAPVERGEPGEPGEPGEPGESGESGESGAPREDAGER
>NZ_CP029195.1|WP_150503969.1|3582359_3582932_+|dihydrofolate-reductase-family-protein
MRTLISSAFVSLDGVMEAPGGEEGYRNAGWTFKDVEFVPEAYAIKGREQEEAAAMLFGRASYEAFSAVWPDMEDFARYKTLPKYVVSTTLTEDDLVDNWGETTILRSLDEVAALKETEGGPIIMHGSASLGRALSDAGLIDRYHLLVFPLLLGAGKRLFSGTDKDTQKLKLVEHETYANGIQKNVFDVVR
>NZ_CP029195.1|WP_150508306.1|3582928_3583753_-|phosphotransferase
MRAVPSAGTDNVMFRLGDDLVVRLPRVAYAARHVEKEQRWLPLLAPHLPLAVPVPVGRAEPGPEFPHPWSVYRWLDGDDTYNAPLTDLAHAAVELGRFGAALRAVDASDGPASFRGGPVTAWEEGQLPAAVRDLAADGLVDAGLATAAWEAVLRLPQWDGPPVWVHGDLLPGNLLGRGGRLTAVIDFGGLGTGDPACDTLPAWTLFTAATRPLFREAARVDDATWARGRGWALAWGLVTEHHYRGRNEVLAAVARRTRTEALAEYAELAGATAS
>NZ_CP029195.1|WP_015035320.1|3584212_3584902_-|copper-homeostasis-protein-CutC
MSNRAVLEVIALDEEDAVAAQTGGADRLELVTDMAADGLTPSRTGFAAIRAAVDIPLRVMLRLTDGFAAGDVDALVARAQELRAAGADEFVLGFLTAEGEPDLVAVERLIAVLDGCRWTFHRAIDRAADRDGLRKRLADLPGLDTYLTAGSATGVDDGLATLKAEAARRGEPGYEAQILVGGGLRLDHLPELRAAGLDAFHIGGAARPHGWTSPVSAAAVRAWREALDG
>NZ_CP029195.1|WP_150503971.1|3584953_3585931_-|hypothetical-protein
MNTGVKITAFAAALAATFGTAYGVGKGVGPVEEPKKAEHGDHAAAPTPTGSAAADGHAGHGAQTPATGTAAELPGGLQISQDGYTLALETPVAAAGKSVLKFSIKDATGRKVTAFTTEHGKELHFIVASRDLNTFRHLHPVKAADGTWSVDADLPAAGGYKAFADFKPAAPGAKGVTLGADLSVPGAYAPKPLPAVAPTATVDGYQVRLGGVLDPGKAGELKLTVTKGGKPVTDLEPYLGAYGHLVALRDGDLAYLHVHPNEGGPGPDVSFTATAPSAGTYRLFLDFQHEGKVRTASFTVTTGGGNASVPATGEATHDAGGHAHG
>NZ_CP029195.1|WP_015035318.1|3586115_3586400_+|heavy-metal-associated-domain-containing-protein
MGSCCTPDNSCSTTAETTAVAVADSTTTVYAVSGMTCGHCKTAITKSVSALDGVISVDVDVAGGLVTVTTGGEPDDAAITAAVDDAGYELTGRA
>NZ_CP029195.1|WP_150503973.1|3586617_3588885_+|cadmium-translocating-P-type-ATPase
MTTTTPGTAQVELAIGGMTCASCAARIEKKLNRMDGVEATVNYATEKAKVTFDAGIDVADLIATVEATGYTAAEPAPPRSETPGSPEGPSDEERADEELRPLKQRLITAVALAVPVIAMAMVPALQIEYWQWLSLTLAAPVVVYAAWPFHRAAWTNARHGAATMDTLISVGTIAAFLWSLWALFFGTAGTPGMTHPFEFTIARTDGAGNIYLEAAAGVTAFILAGRYFEARSKRKAGAALKALMQLGAKEVTVLKDGREVTVPTGELQVGDRFLVRPGEKIATDGTVVEGSSAVDASMLTGESVPVEVSVGDSVTGATLNAGGRLVVEATRVGSDTQLARMAKLVEDAQNGKAAAQRLADRISAVFVPIVIALALGTLGFWLGTGQGLTAAFTAAVAVLIIACPCALGLATPTALMVGTGRGAQLGILIKGPEVLETTRKVDTIVLDKTGTVTTGRMTLIKVHTVEGTDETDVLRLAGALEHSSEHPIAQAVATGAAAKVGTLPTPEDFANIPGLGVQGVVEGHAVLVGREKLLDEWAMALPADLKSAKDTAEKAGKTAIAVAWDGEARAVLEVADAVKETSAEAIRRLRGLGLTPILLTGDNEAVARAVAAEVGIDEVIAEVMPQDKVDVVKKLQAEGRSVAMVGDGVNDAAALAQADLGLAMGTGTDAAIEAGDLTLVRGDLRAAADAIRLSRRTLGTIRSNLFWAFAYNVAALPLAAAGLLNPMIAGAAMAFSSVFVVGNSLRLRGFQAADR
>NZ_CP029195.1|WP_015035316.1|3588922_3589204_+|metal-sensitive-transcriptional-regulator
MAGYGQHKEDIIRRLRRIEGQVRGVQRMVDEDVYCIDVLTQVSAINAALQSCAVALLDEHLSCCVTEAIAQGGDQAKVKVGEASKAIARLIRT
>NZ_CP029195.1|WP_041664095.1|3589374_3589764_+|BlaI/MecI/CopY-family-transcriptional-regulator
MRRLGELEAEIMDRLWAWQRPATVREVVDDINRGRRVAYTTVMTVADILHRKGWLRREKAGRAWLYEPVRSREEYTAGLMRDALGDSQDRPAALLRFVEVISDEDMDALDAALRAARGDQEPHPGGSAA
>NZ_CP029195.1|WP_150503975.1|3589760_3590672_+|M48-family-metalloprotease
MNHHLLVPLGIVALTGFLVPWLVVRARWAQQAPRLALAVWAACGALFAAATALLPAQLVLPIESSHRLADMMYTLRPPTVGQLLHLDGRERFAFALSLSVLSLPAAAFVRRLARARRVRVRHAGVLRLVGRYDPALRATVLDDDRPAVYCLPGRSRRVVVSSGAVDTLTPAQLAAALAHERAHISGRHHLLVAATEAFAAVFARLPLARHGGAAVPLLLEMAADDRALRRCTRDALATALYALASGRAPRSAFAAGGPSAALRMRRILTPHSAGHPVLRGLLTVGAAGLAITPLIVACCSFPG

Crispr_ID: NZ_CP029195_7

• CRISPR_ID: NZ_CP029195_7
• CRISPR_location: 3824546-3824684
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP029195_7

Consensus_repeat	Method
CGGATCCCTGCCGGTCAGGGCCC	CRISPRCasFinder

spacers of NZ_CP029195_7

>7.1|3824569|37|NZ_CP029195|CRISPRCasFinder
GACCCCTGCTGGTCAGGGGCGGACCGCCCGGCGCTTG
>7.2|3824629|33|NZ_CP029195|CRISPRCasFinder
CCCACCGCGCGGATCAGCTGCTCCTGACGGTCC

CRISPR arrays and Neighbor proteins around NZ_CP029195_7

CRISPR arrays

The CRISPR arrays of NZ_CP029195_7

>merge|NZ_CP029195|7|3824546-3824684|CRISPRCasFinder
CGGACCGCGTCCGGTCGGGTCCCGACCCCTGCTGGTCAGGGGCGGACCGCCCGGCGCTTGCGGATCCCTGCCGGTCAGGGCCCCCCACCGCGCGGATCAGCTGCTCCTGACGGTCCCGGACCGCGTCCGGTCGGGCCCG

>NZ_CP029195|7|7|3824546-3824684|CRISPRCasFinder
CGGACCGCGTCCGGTCGGGTCCC	GACCCCTGCTGGTCAGGGGCGGACCGCCCGGCGCTTG
CGGATCCCTGCCGGTCAGGGCCC	CCCACCGCGCGGATCAGCTGCTCCTGACGGTCC
CGGACCGCGTCCGGTCGGGCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150161277.1|3821394_3822210_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP029195.1|WP_150504275.1|3833730_3834519_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl|CDD|234649
NZ_CP029195.1|WP_150504282.1|3836955_3838095_-|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl|CDD|366703
NZ_CP029195.1|WP_150504267.1|3816598_3817891_+|MFS-transporter	unknown	unknown	gnl|CDD|340887
NZ_CP029195.1|WP_150508318.1|3828087_3830328_-|asparagine-synthase	unknown	unknown	gnl|CDD|366273
NZ_CP029195.1|WP_150161278.1|3819694_3821059_-|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224172
NZ_CP029195.1|WP_041662693.1|3840772_3841267_-|sulfurtransferase	unknown	unknown	gnl|CDD|238779
NZ_CP029195.1|WP_150504271.1|3822475_3824539_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|377970
NZ_CP029195.1|WP_150504277.1|3834561_3835929_+|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|379143
NZ_CP029195.1|WP_150504261.1|3807299_3808112_+|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP029195.1|WP_015035074.1|3815901_3816468_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP029195.1|WP_015035060.1|3838488_3839685_-|serine/threonine-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NZ_CP029195.1|WP_015035066.1|3830898_3832338_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150504284.1|3839798_3840539_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|377906
NZ_CP029195.1|WP_150504259.1|3806400_3807303_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213235
NZ_CP029195.1|WP_015035065.1|3832454_3833639_+|L-2-hydroxyglutarate-oxidase	unknown	unknown	gnl|CDD|183292
NZ_CP029195.1|WP_150504280.1|3835963_3836911_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381307
NZ_CP029195.1|WP_150504269.1|3817917_3819588_-|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NZ_CP029195.1|WP_150504263.1|3808124_3809366_+|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP029195.1|WP_150504265.1|3809362_3810031_+|response-regulator	unknown	unknown	gnl|CDD|225107

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150161277.1|3821394_3822210_+|TetR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.0776e-10
NZ_CP029195.1|WP_150504275.1|3833730_3834519_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl|CDD|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	1.70475e-90
NZ_CP029195.1|WP_150504282.1|3836955_3838095_-|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl|CDD|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.24865e-34
NZ_CP029195.1|WP_150504267.1|3816598_3817891_+|MFS-transporter	gnl|CDD|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.61019e-61
NZ_CP029195.1|WP_150508318.1|3828087_3830328_-|asparagine-synthase	gnl|CDD|366273	pfam00733, Asn_synthase, Asparagine synthase. This family is always found associated with pfam00310. Members of this family catalyze the conversion of aspartate to asparagine.	0.00122364
NZ_CP029195.1|WP_150161278.1|3819694_3821059_-|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.31809e-104
NZ_CP029195.1|WP_015035065.1|3832454_3833639_+|L-2-hydroxyglutarate-oxidase	gnl|CDD|183292	PRK11728, PRK11728, L-2-hydroxyglutarate oxidase.	0
NZ_CP029195.1|WP_150504277.1|3834561_3835929_+|PrsW-family-intramembrane-metalloprotease	gnl|CDD|379143	pfam13367, PrsW-protease, Protease prsW family. This is a family of putative peptidases, possibly belonging to the MEROPS M79 family. PrsW, appears to be a member of a widespread family of membrane proteins that includes at least one previously known protease. PrsW appears to be responsible for Site-1 cleavage of the RsiW anti-sigma factor, the cognate anti-sigma factor, and it senses antimicrobial peptides that damage the cell membrane and other agents that cause cell envelope stress, The three acidic residues, E75, E76 and E95 in Aflv_1074, appear to be crucial since their mutation to alanine renders the protein inactive. Based on predictions of the bioinformatics programme TMHMM it is likely that these residues are located on the extracytoplasmic face of PrsW placing them in a position to act as a sensor for cell envelope stress.	2.4357e-48
NZ_CP029195.1|WP_041662693.1|3840772_3841267_-|sulfurtransferase	gnl|CDD|238779	cd01521, RHOD_PspE2, Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.	2.11972e-52
NZ_CP029195.1|WP_015035074.1|3815901_3816468_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.3789e-19
NZ_CP029195.1|WP_015035060.1|3838488_3839685_-|serine/threonine-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.50989e-36
NZ_CP029195.1|WP_150504269.1|3817917_3819588_-|SpoIIE-family-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	1.88243e-49
NZ_CP029195.1|WP_150504284.1|3839798_3840539_-|MerR-family-transcriptional-regulator	gnl|CDD|377906	pfam07739, TipAS, TipAS antibiotic-recognition domain. This domain is found at the C-terminus of some MerR family transcription factors. The domain has an alpha-helical globin-like fold. The family includes Mta a central regulator of multidrug resistance in Bacillus subtilis.	3.51302e-38
NZ_CP029195.1|WP_150504259.1|3806400_3807303_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213235	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter. The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multi-enzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.	4.72815e-94
NZ_CP029195.1|WP_150504280.1|3835963_3836911_-|aldo/keto-reductase	gnl|CDD|381307	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR). Haloferax volcanii aldo-keto reductase is a founding member of aldo-keto reductase family 9 member C1 (AKR9C1).	6.36024e-153
NZ_CP029195.1|WP_150504271.1|3822475_3824539_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|377970	pfam08305, NPCBM, NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.).	9.68058e-35
NZ_CP029195.1|WP_150504263.1|3808124_3809366_+|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.13663e-34
NZ_CP029195.1|WP_150504265.1|3809362_3810031_+|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.82161e-73

Protein sequences

>NZ_CP029195.1|WP_150504271.1|3822475_3824539_+|sigma-70-family-RNA-polymerase-sigma-factor
MSGDSRDEPLGNGGAAETGGLPSRQVPSQGGPGGLSGAPGHPAPLDASVPPQREGKASGRAGEAGTFVGAGATSEGTVPFGAGHDPEADGADEPDTVLPPPRDLPPSDSELVQLMREGDDSAYEELFRRHSDAVRRYARTCCRDAHTADDLTAEVFARTLQAVRGGAGPEQAVRAYLMTTVRRVAANWARTQKREHLVEDFAVFAAEAARASEVSDQGASFGAGLDLGADVLAMHEAEQSLAMQAFRSLPERWQAVLWHTTVEEESPSEVAPLFGLTANATAVLASRAREGLKQAYLQAHVSQSLTAGGDCARYADRLGAYARGGLRMRAERGLRKHLDECAKCRVAAGELAQVNAGIPALLPVAVIGWFAAGYSLKAAGVVAGGAVGAGAAGAAAAATGSSGGAASGGAAAEGLGAPAKAGIAAAVAVAAAAGLVWAMAGDPQPVAAPRPTQPVVTPVVPAEPAPPPTPKPVPPAVRVETPAPTPTPTPPPSPAEPAPKQTPTPTPPPKPTPTPPPPKPTPTPTPTPPKPSPKPKPPPAPPVVYQVNELDYGIFGDGTKPEVALSDSSWMWQRNGLSLGGTRYAHGVSVHAPSSLVIKLNQQCTSYDAVVGVDDMSALLGIGGVRFSVYGDDERLWRSDVVRAGDPPVPVHVDIAGRDTIRLVVEEDGALGRAAVADWAQSRISCS
>NZ_CP029195.1|WP_150161277.1|3821394_3822210_+|TetR-family-transcriptional-regulator
MSGGTLMQIQDSRWQTGAGTATVDDGPHAGVAGPERNGAPVVGGRSAPLRVDAQRNLEHVLRAAREVFGELGYGAPMEDVARRARVGVGTVYRRFPSKDVLVRRIAEEETSRLTEQARAALGQEDEPWSALSRFLRTSVASGAGRLLPPQVLRVGSDDVTVLPLGGDTDEPGDAARVPYQRGVAEQGDARVVAPRPVPAEEKDDAGASELLEVVGRLVDRAREAGELRADVTVADVLLVIATAAPALPDAVQQAAASARLLDILLEGLRSR
>NZ_CP029195.1|WP_150161278.1|3819694_3821059_-|NAD(P)/FAD-dependent-oxidoreductase
MTEPARILVVGGGYVGMYTALRLQRQLRTELRAGAAEIVVVTPEPYMTYQPFLPEAAAGSISPRHVVVPLRRVLDRCRIVIGEVQSVDHAKRTATLATLATAEEGTGTLDLTYDELVIAPGSVSRTLPVPGLIDHGIGFKTVEEAIGLRNHVIEQMDIASSTRDPAIRDAALTFVFVGGGYAGVEALAELEDMARYTARYYHNVKPEDLRWVLVEASDRILPEVGEEMGRYAVRELRGRNIDVRLETRLESCEDRVAVLSDGTRLPTRTVVWTAGVKPAPVLAETDLPLNERGRLRCTAQLAVEGAPHAWAAGDAAAVPDVTSDEPGKECAPNAQHAVRQAKVLAENITASLRGQPLKEYAHAYAGSVASLGLHKGVAHVYGRKLKGYPAWFMHRAYHLSRVPTFNRKARVLAEWTLSGLFKREIVSLGSLEHPRAEFELAAAPPPDNGDKPSS
>NZ_CP029195.1|WP_150504269.1|3817917_3819588_-|SpoIIE-family-protein-phosphatase
MNFTRWSARLPGTQRRAARGTEGSVPAARGEYAQQLGHLTDTDDPDGPDDEAAAAAAGVPALEDFSVRELLGRLPGLVALVYGPEHRIAYVNDAYAAAFGPRPAGTTVADTCPEAEELGLLPLLDQVLRSGKPRTVKSRRTQDGGSYTVTCLPVDSPHLDGGGVLVHAADVTDHAEAAERLRASERRHRETAVTLQRSLLPQDLEQPDDLRIAATYQPGGTDAAVGGDWYDVITLGAGRTALVIGDVMGRGVRAAAVMGQLRTAVRAYARLDLPPHEVLQLLDGLAAEIDASQIATCVYAIHDPNEGKLVYASAGHLPILVRDEDGTVRRAEDPTGPPLGTGGWLHASGSIALPPGSTAVLYTDGLVERRREDIDEGVAALARALSGASGTPQVVCDRLLRSLGVTAEHDDDVAVLVVQHPSRKGADAELFHNAALELLGGVEAAPRARAFASGVLSSWRFPVELRDLGVLATSELVANSLQHGTPPMRLRLRRTDRRLIIEVTDGDDHLPRRRRAETEDEAGRGISIIATIASSWGSRRTPGGGKAVWCEFALPD
>NZ_CP029195.1|WP_150504267.1|3816598_3817891_+|MFS-transporter
MTKARGAAMRRIQAGSALSAFGLGFTVPYLYVYVAQVRDLGAATAGIVLAVFAMAALVVLPFSGRAIDRRGPVPVLLVASVAAAVGAVAMGFASSVPAAVGAAALLGAGTAVLQPALATMIVWCSTPVGRTRAFAMQFFLQNLGLGVGGLIGGLLVDTSRPGSFILLFSIEAAMFLVLAAIVGTVRMPGSPALQGARPSEGGKGGGVRALLGHKAMVQLCVLGFVLFFACYGQFESGLAAYGTEAAGIQPSTLGIALAANTAVIVVAQFLVLKFVERRKRTRVIAAVGLIWTVAWLIAGYAGLGHGSQAMATAAFVSTYALFGLGEAMLSPTVAPLVADLAPESMVGQYNSAFALVKQLALAVGPAVGGPMGAALHGPYIVTFVLFSLGITFLAVRLGRQLTPEQNQPSLAVKPSRVVAQHIPEKETAAA
>NZ_CP029195.1|WP_015035074.1|3815901_3816468_-|MarR-family-transcriptional-regulator
MSDNPERSGPQAPQEPSLDEQIAAYQREFRDLDPQVEKVVSALGRLNRRMNVAYGRQLADLGISNAEWEVLKTLVLSGEPYRLGPGELAKRLGLTPAAMTHRIDRMAGEGLVTRDRDENNRVRVIVELTDEGRSKWLEAMRMATAFEEDLLQDLTSDERGVLGEILIRLLRRVELTQPDAGGRLTDLD
>NZ_CP029195.1|WP_150504265.1|3809362_3810031_+|response-regulator
MTTVLIADDQPMQRFGFRMLLESQDDMTVVGEAANGTEAIRLVDRHHPDVVLMDIRMPGLDGIEATRRIITTGARTRVLIVTTFDLDEYAYDGLRAGASGFLVKDAQPEELLAGIRAVASGDAVVAPSLTRRLLDAYIHHLPQSPTADPDPEDPRLATLTEREREILTVIGQGWTNTEIAERLHLAESTVKTHVGRILAKTGARDRVQAVILAYDTQLVTPA
>NZ_CP029195.1|WP_150504263.1|3808124_3809366_+|sensor-histidine-kinase
MTTETARETATTPTRLSRSLQQLTARARAAHARRPWVWDTTLTLFWTAAALVDASGGWRNTAPDPTVPPWLVITLSLALALPLYGRRRHPTAVLAVMACAALVSAASGAALQAGYLQLVPLFQLALTRPPRALLWALGLLVPPLLAGAVRFPRGSWDQHVVPTLTSYALVALLGIAVRSRRDHTAALVDRARRLEVERDQEIRLAAAAERTRIAREMHDIIGHNLSVITGLADGGRYAAARSPERAAQALDAIGTTSREALAELRRLLGVLRADEPEAARDPQPTLADLDTLITGVRKAGLPVRLDRPDTPTAQPLPPGAQLTVYRVVQEALTNTLKHAGEGATATVLLTYTPRDVRAEITNTGGQATAAPPGQGITGMRERAALYDGTLESGPLPTGGWRVGLRLPREGSPS
>NZ_CP029195.1|WP_150504261.1|3807299_3808112_+|ABC-transporter-permease
MTTTTPAPATVATPTGSPALSHARVLRSEWHKLWTVRSTWTTVLSAVALVLGVGLLMGATYTSGGGDSDVDTVVLTLYGTQLGAIALAVLGILVTAGEYATGLIRSTLTAVPGRLPVLWAKAAVYTGAVLALAFLTDLLTFLTAQVFLSDTDQAASLTDDGVLAAIAGNAAGITLLGLIALGLGAALRSVPGAIGAFVGGVMILPEVLGMLPYEAVETAVRYFPTQAAGALGSATPIPGAASPGAALLALVLWAAATLTVPALLLKRRDV
>NZ_CP029195.1|WP_150504259.1|3806400_3807303_+|ATP-binding-cassette-domain-containing-protein
MIRAENLTKRYGDTTVVQDLSFTVHPGAVTGFLGPNGAGKSTTLRMILGLDAPTRGHATVDGRPYARHTAPLTRVGALLEARSTHPGRSARHHLTALALTHGIPRSRVDRVLALAGLTQVADKRVKGFSLGMGQRLGIAAALLGDPATVVLDEPVNGLDPEGVLWIRTLLKSLAAEGRTVLVSSHLMSEMALTADHLIVIGKGRLLADTTVEALVRASGGAAVKVVTPEPDRLRDLLPGAGITVEAPDTLLVTGPDAPEIGRTAAAHGLPLHELTPQAASLEQAFMALTHDSVEYQGAPA
>NZ_CP029195.1|WP_150508318.1|3828087_3830328_-|asparagine-synthase
MRWLVGWSSAAAGFATTAGARAGSVSGAYGSSHGGAYGPYGGEYDPAQPPGHAAGHPSAHATGHAAATEGRTVQPVGAQLLWGDPDPLWAVGDWRPDEVRVVAVDDHTRLAVLGCCAASDEELRIGLLTARGGALRHLTAWPGSYTAIVKAGRRLTVTGDLAGARPVFHTPWAGGTAYATAALPLADLVEAQLDIGHLAALLACPETPEALRDSTPYEGVRRVPPGHALILREGSREITGYEQVASLAVAAAQADPRQAVEGVRNALVEAVRARLTAPRHAPEAPLPDPGPVPGMGPADRRAARGGGPAPGIGADLSGGSASGTLALLAAGLPGVPGTITGQGTGAGERLLAVTFNDLATRAGSDREDELKRAGEIAADPRLHHVVVAGGEEALPYAALDGPLTDEPGPALVTAERHRRRLAGGSADHFTGMGAKQVLDAHPARLADLLMDRRRRSLVRPVTALAKASGPSAGSFLVPLTVYRAARKLARTPYRTGLEAAARRVLEANRTAPDGFGPLEASLSALTWSRPGPAARWLTGEALAEVSVRLNRAATLPASVQRPGEARARAALARAAADHRVLEQAAEIRGQRLHAPFLDNQVVRACRELPEALRVQPDARAGVLRTVLAGSGIHDLPPGWGAPHPAVPAAATRAGLRAALPHLIALFDAPLLADAGLIEARVVREALRAAADGAPVPLDGLADLVSTELWLRRLLARRGSCWTNTAEPRAHRAVQGPLIPATRSLPA
>NZ_CP029195.1|WP_015035066.1|3830898_3832338_+|hypothetical-protein
MSREQRGPNEKLGTVLALAGISNAGLARRVNDLGAQRGLTLRYDKTSVARWVAKGMVPQGAAPHLIAAAIGQKLGRPVPLHEIGLADADPAPEVGLAFPRDVGEAVRSATDLYRLDLAGRRAGGGGIWQSLAGSFAVSAYATPASRWLITPADPSVEREAPGPAGGGTAAATEHARVGHSDVAKLREAAEDARRWDSKYGGGDWRSSMVPECLRVDAAPLLLGSYSDEVGRALFGATAELTRLAGWMAFDTGQQEAAQRYYIQALRLARAAADVPLGGYVLASMSLQATYRGFADEGVDLAQAALERNRGLATARTMSFFRLVEARAHAKAGDGVAAAGALKSAEGWLERSREGDADPTWLGFYSYDRFCADAAECYRDLKAPREVRRFTEQALSRPTEEFVRSHGLRLVVSAVAELESGNLDAACAAGTRAVEVAGRISSARTTEYVRDLLHRLEPYGDEPRVMELRERARPLLVTPA
>NZ_CP029195.1|WP_015035065.1|3832454_3833639_+|L-2-hydroxyglutarate-oxidase
MFDCDVLVVGGGIVGLSTAYALTRAAPGTRVTVLEKEHAIARHQTGRNSGVIHSGIYYRPGSLKARFAVKGAAEMVKFCAEWGIPYEVTGKLVVATAREELPRLHALVQRGRENGIPVRELGPAQISEYEPRVRGLAAIHVGTTGICDYGAVSERLAEASGARILYGAEVTVIDRRPWGVAVRTADGRVVRARVLVNCAGLHCDRIARLAGDDPGMRIVPFRGEYYELADPSLVRGLVYPVPDPAFPFLGVHLTRGIDGGVHIGPNAVPALAREGYGWSVVHPRELAGTLAWPGSWAIARAHWRYGAGELRRSVSKRAFTEAVRRLLPVVSESDLRRAAPGVRAQAVLRDGTLVDDFLIREAARTVHVLNAPSPAATASLPIGREVATRALAHL
>NZ_CP029195.1|WP_150504275.1|3833730_3834519_+|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MNSSQSVAGSPEPAPQPVQRGSQRFAPGEGPLPDPAGSHHERRIRSFQPRRSRVTTSQAEALLKRWPDWGIDIDGKRVLDLGEMFGGLPVVLEIGFGMGEATAQMAAADPGTGILAVDVHTPGQGNLLGLADRNGLTNVRVANGDAIILLREMLDKDVLDGCRVYFPDPWPKARHHKRRLIQPEFLSLLATRLKPGGVLHCATDWEPYAEQMLEVLSAHPDFENTRADGGFAPRPDFRPLTRFEGQGLDKGHVVHDLLFRRK
>NZ_CP029195.1|WP_150504277.1|3834561_3835929_+|PrsW-family-intramembrane-metalloprotease
MGVVRVAHVSHPAPAASGTADTGTTPVPHRDTEEPDFPAAADRTQWRYRPRRAFWRSRLVRAVAVVTVLAICALFILGLVREQTGTEGFLVGLGLAVLPVPLLMAAFRWLDRVEPGPWKNLLFAFAWGAFAAALVAILANSFAVRWIATATADPDSADTLGATLVAPVVEESAKAAAILLLFLFRRKHFGGLVDGVVIAGFTATGFAFTENILYLGNAFGEDQEFGATGIGSVTAGTFFVRVVMSPFAHPLFTVLTGIGFGFAALAPRGKRLRRVLLPFAGLLLAMGMHAAWNGSATFGGPLAFYAVYLALMVPAFGLLTWLAVWSRQRELRTISGELPAYAAAGWLSPAEPLALSSMRARQVARSFAARTYGQPAARAVGEYESFATTLAFLRDRARRGTAGPDFPAREQELLHHLWQRRAVASPALTYAARATGQVWAPPQYLDYGGYNPYRS
>NZ_CP029195.1|WP_150504280.1|3835963_3836911_-|aldo/keto-reductase
MTSLRPLGSSDLHVFPLALGGNVFGWTADEAQSFAVLDAYTAAGGNFVDSADVYSAWAEGNEGGESETVIGRWLASRGNRDDVLVATKAGAHPRFKGLSAPTIKGAAEESLRRLGTDRIDLFYTHFDDESVPVEEIVTALDQLVKDGKVRAVAASNISPERLRASLDFAEAEGLTRYVALQPHYNLVSRDTYEGPLQETVERAGLSAVPYYGLAAGFLTGKYRPGATVDSVRASGAAGHLDTERGRAVLSALDTVAEAHGTELATVALAWLASRPTVAAPIASARTVEQVPALVAAAGLTLTEAELTLLTEASAL
>NZ_CP029195.1|WP_150504282.1|3836955_3838095_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MASNTPAPEAPFDAFGGGAGPAAPDTEWNPTEGSLRAENRSGGRHRVVKQRSNFARSSTVLGVGVIAAVGAGGLATAQEKPPVAISLPDLPDMPDLGLPDAHDLPGVGALLPEESHETVAEGRANPNPLTVATYATDDERATKAERAEPVADVQAGAGDAGEALRARILQQAEQQQASADAADKAAAEKAAAEKAAAEAAAKADAAEKAAAEAKAKAAAEAKAKAEAEAKAKAEAAAEAERLAKLAASYSMPLSSYSLSATYMQSGSMWSSGYHTGLDFAAPTGTPLKAVHGATVKSAGWSGSYGYRIVLELSDGTEVWYCHLSSMTVSAGQTVGTGETIGRVGATGNVTGAHLHLEVHTAGGDGIDPAQWLRSKGLSL
>NZ_CP029195.1|WP_015035060.1|3838488_3839685_-|serine/threonine-protein-phosphatase
MGQPLGVVGGGRRGGDPRSYGRARRFIRALPPLVIVGGVVFDLLTPAKYSAAPLFSAAPLIAAPFFSTLTTLLTGIAAVLASLGLHVYNETALEISSLTEVLTVLTVSALALLINRVVRRSGERLASARVIAETAQKAVLPTPAERIGGLHCAARYEAAQADAFIGGDLFAVQDTPFGVRLVVGDVRGKGMEAVEAVAVVIGAFREAAEQERTLEGVAGRLERALAREGTRRDGLDAFEGFTTAVLAEIPRGDGGGTFDGFVRVVNRGHPPPLMLYADGRLDTMDPGEAALPLGMGDLAAWPDRAEARPYPPGATLLFYTDGLSEARNAEGVFYDPGQRLAGRIFPGPEELLDALVDDVRLHTGGGSTDDMALLAVSRPATGQPERRRTMPVVPPGGR
>NZ_CP029195.1|WP_150504284.1|3839798_3840539_-|MerR-family-transcriptional-regulator
MEWSIQEIAKKAGTTSRTLRHYGERGLLEPSRIGANGYRYYDQAGLVRLQRILLLRELGLSLPAIAEVLAGQQDTSAALRTHLALLEQERERIGRQIVSVRTTLHKTERGEELMADEVFDGFDHTVHEKEVTERWGRKAYEKGDRWWRSLSAERKKAFMDEQAGIARDFARALQQGLAADSDEVQALARRQVAWLSSTTTPTKEYVIGLGRMYVDDPRFTVHYDKHGEGTAVLVRDAMEIYAERNL
>NZ_CP029195.1|WP_041662693.1|3840772_3841267_-|sulfurtransferase
MTTTTSQVNAVLRTPPASPAAAAAYFSASLAFHADVSDVAAALAAAAAEGTDPGFVVIDSRSTASWDQGHVPGAIHLPTALIPEQAERLLDRSVPVVTYCWGPGCNGATRAALALAELGFQVKEMLGGFEYWVREGFAYETWEGPAEKAADPLTAPVDSDDCGC

Crispr_ID: NZ_CP029195_8

• CRISPR_ID: NZ_CP029195_8
• CRISPR_location: 4530833-4530940
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_8

Consensus_repeat	Method
AACGGGACCGGAAAGCACCGAGGAA	CRISPRCasFinder

spacers of NZ_CP029195_8

>8.1|4530858|58|NZ_CP029195|CRISPRCasFinder
GTCAGAGCGAAAAGGTCTGATAGAGTCGGAACCGCCGGAAGGGCCCGGAGCGAAAGCG

CRISPR arrays and Neighbor proteins around NZ_CP029195_8

CRISPR arrays

The CRISPR arrays of NZ_CP029195_8

>merge|NZ_CP029195|8|4530833-4530940|CRISPRCasFinder
AACGGGACCGGAAAGCACCGAGGAAGTCAGAGCGAAAAGGTCTGATAGAGTCGGAACCGCCGGAAGGGCCCGGAGCGAAAGCGAACGGGACTGGAAAGCACCGAGGAA

>NZ_CP029195|8|8|4530833-4530940|CRISPRCasFinder
AACGGGACCGGAAAGCACCGAGGAA	GTCAGAGCGAAAAGGTCTGATAGAGTCGGAACCGCCGGAAGGGCCCGGAGCGAAAGCG
AACGGGACTGGAAAGCACCGAGGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150505093.1|4514299_4516153_+|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|237104
NZ_CP029195.1|WP_150508356.1|4519697_4520468_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NZ_CP029195.1|WP_015034391.1|4540525_4540735_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|200128
NZ_CP029195.1|WP_150505107.1|4537131_4538334_+|MFS-transporter	unknown	unknown	gnl|CDD|340951
NZ_CP029195.1|WP_015034387.1|4544954_4545740_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NZ_CP029195.1|WP_150505101.1|4520464_4521202_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|272861
NZ_CP029195.1|WP_150505113.1|4541146_4542256_+|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187551
NZ_CP029195.1|WP_150505097.1|4518617_4518941_+|SH3-domain-containing-protein	unknown	unknown	gnl|CDD|227324
NZ_CP029195.1|WP_150505109.1|4538302_4539478_+|acetoin-utilization-protein-AcuC	unknown	unknown	gnl|CDD|212520
NZ_CP029195.1|WP_150160832.1|4522133_4522730_-|isochorismatase-family-protein	unknown	unknown	gnl|CDD|238496
NZ_CP029195.1|WP_150505117.1|4543417_4544656_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150505115.1|4542271_4543357_+|acyltransferase-family-protein	unknown	unknown	gnl|CDD|153249
NZ_CP029195.1|WP_150505103.1|4522775_4523828_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|181818
NZ_CP029195.1|WP_150160829.1|4536440_4537088_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319828
NZ_CP029195.1|WP_003948845.1|4540899_4540998_+|AURKAIP1/COX24-domain-containing-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150505099.1|4518976_4519504_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015034399.1|4521287_4522097_+|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl|CDD|237008
NZ_CP029195.1|WP_150505105.1|4523794_4524793_-|tryptophan--tRNA-ligase	unknown	unknown	gnl|CDD|234866
NZ_CP029195.1|WP_150505111.1|4539582_4540398_+|hypothetical-protein	unknown	unknown	gnl|CDD|374030
NZ_CP029195.1|WP_150505095.1|4516231_4518460_-|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|270916

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150505093.1|4514299_4516153_+|dihydroxy-acid-dehydratase	gnl|CDD|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP029195.1|WP_150508356.1|4519697_4520468_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.44622e-78
NZ_CP029195.1|WP_015034391.1|4540525_4540735_+|helix-turn-helix-domain-containing-protein	gnl|CDD|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	1.76024e-16
NZ_CP029195.1|WP_150505107.1|4537131_4538334_+|MFS-transporter	gnl|CDD|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.29396e-90
NZ_CP029195.1|WP_015034387.1|4544954_4545740_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	2.89656e-93
NZ_CP029195.1|WP_150505101.1|4520464_4521202_+|ABC-transporter-permease-subunit	gnl|CDD|272861	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family. The seed members for this model are a paralogous family of Mycobacterium tuberculosis. Nearly all proteins scoring above the noise cutoff are from high-GC Gram-positive organisms. The members of this paralogous family of efflux proteins are all found in operons with ATP-binding chain partners. They are related to a putative daunorubicin resistance efflux protein of Streptomyces peucetius. This model represents a branch of a larger superfamily that also includes NodJ, a part of the NodIJ pair of nodulation-triggering signal efflux proteins. The members of this branch may all act in antibiotic resistance.	8.30024e-27
NZ_CP029195.1|WP_150505113.1|4541146_4542256_+|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187551	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs. Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.45135e-74
NZ_CP029195.1|WP_150505097.1|4518617_4518941_+|SH3-domain-containing-protein	gnl|CDD|227324	COG4991, COG4991, Uncharacterized protein with a bacterial SH3 domain homologue [Function unknown].	3.31241e-10
NZ_CP029195.1|WP_150505109.1|4538302_4539478_+|acetoin-utilization-protein-AcuC	gnl|CDD|212520	cd09994, HDAC_AcuC_like, Class I histone deacetylase AcuC (Acetoin utilization protein)-like enzymes. AcuC (Acetoin utilization protein) is a class I deacetylase found only in bacteria and is involved in post-translational control of the acetyl-coenzyme A synthetase (AcsA). Deacetylase AcuC works in coordination with deacetylase SrtN (class III), possibly to maintain AcsA in active (deacetylated) form and let the cell grow under low concentration of acetate. B. subtilis AcuC is a member of operon acuABC; this operon is repressed by the presence of glucose and does not show induction by acetoin; acetoin is a bacterial fermentation product that can be converted to acetate via the butanediol cycle in absence of other carbon sources. Inactivation of AcuC leads to slower growth and lower cell yield under low-acetate conditions in Bacillus subtilis. In general, Class I histone deacetylases (HDACs) are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues in histone amino termini to yield a deacetylated histone (EC 3.5.1.98). Enzymes belonging to this group participate in regulation of a number of processes through protein (mostly different histones) modification (deacetylation). Class I histone deacetylases in general act via the formation of large multiprotein complexes. Members of this class are involved in cell cycle regulation, DNA damage response, embryonic development, cytokine signaling important for immune response and in posttranslational control of the acetyl coenzyme A synthetase.	1.67272e-156
NZ_CP029195.1|WP_150160832.1|4522133_4522730_-|isochorismatase-family-protein	gnl|CDD|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	3.61285e-49
NZ_CP029195.1|WP_150505115.1|4542271_4543357_+|acyltransferase-family-protein	gnl|CDD|153249	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this suubgroup are such LPLATs as 2-acylglycerol O-acyltransferase (MGAT), and similar proteins.	2.14026e-46
NZ_CP029195.1|WP_150505103.1|4522775_4523828_+|helix-turn-helix-domain-containing-protein	gnl|CDD|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	1.80539e-98
NZ_CP029195.1|WP_150160829.1|4536440_4537088_+|HAD-IA-family-hydrolase	gnl|CDD|319828	cd07526, HAD_BPGM_like, subfamily of beta-phosphoglucomutase-like family, similar to Escherichia coli 6-phosphogluconate phosphatase YieH. This subfamily includes Escherichia coli YieH/HAD3 an 6-phosphogluconate phosphatase, which can hydrolyzed purines and pyrimidines as secondary substrates. It belongs to the beta-phosphoglucomutase-like family whose other members include Lactococcus lactis beta-PGM, a mutase which catalyzes the interconversion of beta-D-glucose 1-phosphate (G1P) and D-glucose 6-phosphate (G6P), Saccharomyces cerevisiae phosphatases GPP1 and GPP2 that dephosphorylate DL-glycerol-3-phosphate, and DOG1 and DOG2 that dephosphorylate 2-deoxyglucose-6-phosphate. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.03005e-55
NZ_CP029195.1|WP_015034399.1|4521287_4522097_+|pyrroline-5-carboxylate-reductase	gnl|CDD|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	8.15993e-107
NZ_CP029195.1|WP_150505105.1|4523794_4524793_-|tryptophan--tRNA-ligase	gnl|CDD|234866	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed.	2.36158e-174
NZ_CP029195.1|WP_150505111.1|4539582_4540398_+|hypothetical-protein	gnl|CDD|374030	pfam15698, Phosphatase, Phosphatase. Members of this family have phosphatase activity.	7.76239e-139
NZ_CP029195.1|WP_150505095.1|4516231_4518460_-|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.01256e-83

Protein sequences

>NZ_CP029195.1|WP_150505105.1|4523794_4524793_-|tryptophan--tRNA-ligase
MKRIFSGVKPTGHLTLGNYLGAVRRWVEVDQHRADALFSVVDLHALTVEHDPGRVRRLSRQAATLLMAAGLDPELCTLFVQSHVDEHARLSYLLECTATDGELRRMIQYKEKSVRAQAAGQGVRLSLLTYPVLMAADILAYGADEVPVGEDQTQHVELTRDLAVRFNQRYGHTFTVPRATRPEVAARVMDLQDPTSKMGKSHANGAGIVYLLDDADTVRRKIMRAVTDSGRGVEYDREARPGVANLLDLLAAATGGNPEALAGVYETYGSLKKDTADAVVELLRPVRERHAELAADPGQVDLVLRDGARRARETARPLVDRAYRAIGLLAAG
>NZ_CP029195.1|WP_150505103.1|4522775_4523828_+|helix-turn-helix-domain-containing-protein
MTAIDDLLPHVPAAPPTPAPRPQRIALLSFPGIRAFDISVITEVWGSDRTLRGVPPFDLRRAAADPHTPIPLRGGLSLTPDRPLSWLDDLTPDDLVLVPGIEDPDADLPTPVLDALRRAHTAGIPVASLCAGAFVLARAGLLDGRRAVTHWHLAATLAARHPAIQVEPDALFVEDTGVWTSAGTAAGIDLCLHLVRTAHGAEAAAAIARAMVTAPFRTGTQAQFIEHPTPRADRDADALADVRAHALAHLDEPHTVATLAARAGMSPRSFARHFQATTGTTPLHWLITQRVAAAQKLLELTDHPLPEVARRAGFGSEVTMRQHFASHLATSPRDYRNAFRHPAANSPIAR
>NZ_CP029195.1|WP_150160832.1|4522133_4522730_-|isochorismatase-family-protein
MEIAQNAALVVIDVQKGFEEEYWGKRNNPAAEENIAALIDLWQETGRPVVFVRHDSPEGSRSPLRAGYAGNAFKDFVEERRGKGAGPELLVTKSVNSAFYGEPSLDGWLTGQDIAQIVIVGIQTNMCNETTARMAGNLGYEVLFPLDAMHTFDLEGPFGWSRSADELAQATAVSLHGGRFAEVVSTADVVAGVSAGVR
>NZ_CP029195.1|WP_015034399.1|4521287_4522097_+|pyrroline-5-carboxylate-reductase
MTQTVAVLGTGKIGEALLSGMIRAGWRPANLLVTARRAERAEELRTRYGVETVTNAEAAKRADTLILAVKPQDMGRLLDELAPHVTADRLVISAAAGIPTSFIEDRLTTGTPVVRVMPNTPVLVDEGMSVISAGSHATPAHLAHTEEIFGGVGKTLRVPESQQDAATALSGSGPAYFYFLVEAMTDAGILLGLPRAQAHDLIVQAAIGAAVMLRDSGEHPVKLREAVTSPAGTTISAIRELENHGVRAALIAALEAARDRSRELASGNS
>NZ_CP029195.1|WP_150505101.1|4520464_4521202_+|ABC-transporter-permease-subunit
MSPARTLATAARVLRQLRHDPRSIALMLLVPCVMLFLLRYVFDGSPGTFDNIGASLLGIFPLITMFLVTSIATLRERTSGTLERLLAMPLGKSDLIAGYALAFGLLAVVQSTLATGLAVWFLGLDVIGSPWLLLLVALLDALLGTALGLFVSAFAASEFQAVQFMPAVIFPQLLLCGLFTPRDHMAPALEAISDVLPMSYAVDGMNQVLRHPEITGDFVRDALVVAGCALLVLGLGAATLRRRTT
>NZ_CP029195.1|WP_150508356.1|4519697_4520468_+|ATP-binding-cassette-domain-containing-protein
MTARDLTVVRGDRTVLHGLDFTVTAGRITGLLGPSGCGKSTLMRAIVGTQAKVDGTLHVLGRPAGDPTLRSRIGYVTQAPSVYDDLTVRQNLDYFAAVLLPGRAHREERRTAVDRAIDDVDLASHADHLAGRLSGGQRSRVSLAVALLGTPELLVLDEPTVGLDPVLRRDLWKLFHQIAADRGTTLLVSSHVMDEAERCHRLLLMREGEILADDTPEALRRRNDTATVEEAFLHLVDAAAARTAQAARAAHEEPRP
>NZ_CP029195.1|WP_150505099.1|4518976_4519504_+|hypothetical-protein
MSDEEQTPHPTGGPTGGTPAGPQPEEIRFFGTTWVDHSGTYTLRRVGLAAGSLAAAVAACFVLRFAYEGLEIAAVGGIVNMLVVIMFAVCSAIAFRKTWEGYLRRPADPAREESLRSLKAIGFIGALLAYCARCFVEAPGEKLRRAEYETARAQFEKRRGARTGNPAARKKPKRK
>NZ_CP029195.1|WP_150505097.1|4518617_4518941_+|SH3-domain-containing-protein
MSTDENTTTATATTAAETVTAMASTATRYAIAPGYQVNVRSGPSTQYPVVRSLPLGATVAISCQKYGEWISGPYGTTKIWDNIAPGEYVSDAYVRTGSDGLVAPRCA
>NZ_CP029195.1|WP_150505095.1|4516231_4518460_-|PQQ-binding-like-beta-propeller-repeat-protein
MPPLRGTGADREAEGPEYAGDYRLQACLGAGGMGVVHLAASASGLRLAVKVVHARYAEDPEFRARFRQEVAAARRVSGAFTAPVVDADPDAVRPWMATLYVPGPTLADQVKRNGPLAPAELRRLTAGLAEALRDIHRAGVVHRDLKPSNVLLTDTGPKVIDFGISRPVDSDLHTETGKLIGSPPFMAPEQFQRPREVGPAADVFALGSVLVHAATGHGPFDSDSPYIVAYQVVHDEPDLTGVPAELAPLVARCLAKDPAERPSPAQIMAALLPPSYAAEAFIPAQRRRPSLPDGEDGAYGETGSRGGRGEPGPSPAWDADTPVRATAPVPPRRARPLRGGRLRPRLTIAVAAAVALAGAGIYAAMSPPARGGTEPPARPGEVATAFAGWETTLQKHGPTAAPACAHGEGALYCAARGVGLARLDPVTGKVLWSLDAPVKAESPLAPFVLTGGARGTGGLVGAAAPTGPLRAYTAERGAPAWSTSSKLPESFRPAGSAVVLTDGQGGVRAVDGRGGKELWRHGLSGFDVPRPGPYDTVSGLLAVSETSADGTHTRVGEFRPRTGEVVRQRNLRGALEPLGRTSDGTLVLGSLYQASLYDALVLLDPAGGSVRRLPLPHRIDVRGVAVHGSVAHVLDADGHLTAFDTAAPKGRVLWELETGAGNVSTPVVGPGDRLYFSVQDGRLLAVDTVRGALVGQTRPRLLNGRLDYAPLVPPPLVAGDRVFGTAPDGSVFAVDARDPASW
>NZ_CP029195.1|WP_150505093.1|4514299_4516153_+|dihydroxy-acid-dehydratase
MPELRSRTVTHGRNMAGARALMRASGVPGADIGRKPIIAVANSFTEFVPGHTHLQPVGRIVSEAITAAGAIPREFNTIAVDDGIAMGHGGMLYSLPSRDLIADSVEYMVEAHCADALICISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGRAVLVDGTVRTLDLVDAMSDAVNPAISDEDMLRIEENACPTCGSCSGMFTANSMNCLTEAIGLSLPGNGSLLATHTARKGLYEAAARTVVDITRRYYDEDDASVLPRSIATRAAFENAMALDIAMGGSTNTILHLLAAAQEAEVAYGLPDMDEVSRRVPCLSKVAPNVAKDRTYYMEDVHRAGGIPAILGELYRGGLLNEDVHAVHSPSIKEWLDTWDVRGGSASDEAVELFHAGPGCVRSATAFSQSERWEALDVDAAGGCIRDVAHAYSKDGGLAVLHGNLAVDGCVVKTAGVDESIWTFEGPAVVCESQDEAVQKILLKEVKEGDVVVIRYEGPKGGPGMQEMLYPTSYLKGRGLGKACALVTDGRFSGGTSGLSIGHASPEAASGGTIALVEDGDRIRIDIPNRSIELLVDEATLAARREALNGVYAPRNRERKVSAALRAYAAMATSADKGAVRDVTKLG
>NZ_CP029195.1|WP_150160829.1|4536440_4537088_+|HAD-IA-family-hydrolase
MRYDLVVFDNDGVLVDSEPISNTLLAGYLTELGHPTTYEESVRDFMGSAMHRIHELVEERSGQRLPVDFDETFHARVFAAFQAELEAVAGARDVLKRLAEAGVPYCVASSGSHERIRVGHRRTGLDVWFPDEIVFSAEDVGRGKPAPDLFLHAAARMGVAPERCVVVEDSRLGVQAALAAGMDVYGFTAMTPEAKLAGAKGFFGAMEELPAILGL
>NZ_CP029195.1|WP_150505107.1|4537131_4538334_+|MFS-transporter
MTDARLRRGRGSLAVSFFVQGVTFALLVTRIPAIQDRYGISDGLLPAFLAAVPILAGVASVVTEKVVARVGPAVVLRWAQPFVLLALLAVGMGDALWQAALALGLFGLAVGALDASMNMLGVSLQREYGRSIMLGFHASYSFGGIAGASLAWAGAHWHLSLFVSYLPVVAVLLPVAFVGSRWYVAGGAGPVAEEAGESKGSGVAFKLLLPLCLVMSFAYIGDSTVSNWSAKYLQDVLGSSEELATVPYNAYMVTTLLGRAVGDFGVRRFGAGTVVRAGAVLAALGFACVAVAPGAWAGIAGFTVLGLGLSVIVPQTFAAAGRLFPGASDAAVARLNVFNYVGFLVGSPLVGALGDAWSYRGAMLVPMVLVLVTVVYATSFGSREARYGGGHERPRTVDVG
>NZ_CP029195.1|WP_150505109.1|4538302_4539478_+|acetoin-utilization-protein-AcuC
MSGRALLMWDEAVTQYDFGSEHPMDPVRLALTMSLVRAYGLDRAVDVVAAKPAGDSTLRLVHREDYVAAVRAASADPRHADQEYGLGTVDDPAFAGMHEASALIAGQSVGAAEAVWRGEAEHAVNFAGGLHHAMPGSASGFCVYNDASLAIARLLELGAERVAYVDVDVHHGDGVQAAFWEDPRVLTVSLHEHPRTLFPQTGWPEETGAVGAGEGGAVNVALPAGTGDAGWLRAFHAVVPELLADFRPQVLVTQHGADTHFEDPLAHLAVSLDAQRAVQEACHELAHEYAGGRWLALGGGGYAVVDVVPRSWTHLVGIAAHAPVDPESVIPSSWRDEVYARTRQLGPARMTDGRWPVDFRDWSAGYDPADRLDQAVLATRKAAFPLRGLLA
>NZ_CP029195.1|WP_150505111.1|4539582_4540398_+|hypothetical-protein
MLSTGALRAHLLAAGLAGTVATSREENLRSYRLFAARDPRVLLGLDPTWGWGEADLLRLMADKCGVSGDPTHRTGPDVIDPERTLRGLDAFAARLAAAAARRVPVLLGTGHPHRLLGFYVALADALSAAGCLVLTPAQGRCVDITTRFGVRTYLIDYVRGVALVREPGPSGGGREPGAHSHSPLPVRAALESAVECGGPLPELVVGDHGWVCGAGQLGIEAIGLADTDDPALFVGEAEGQVSVAVPLDDGVRSSSYVPLTRYVLNRACLSR
>NZ_CP029195.1|WP_015034391.1|4540525_4540735_+|helix-turn-helix-domain-containing-protein
MAAGERPLNEVKFLTVAEVASVMRVSKMTVYRLVHSGHLPAIRVGRSFRVPEQAVHEYLRESFVGVGTA
>NZ_CP029195.1|WP_003948845.1|4540899_4540998_+|AURKAIP1/COX24-domain-containing-protein
MGSVIKKRRKRMAKKKHRKLLKRTRVQRRNKK
>NZ_CP029195.1|WP_150505113.1|4541146_4542256_+|NAD-dependent-epimerase/dehydratase-family-protein
MGKVVLVTGAARHLGGRFVRRIQRDPEVERVIAVDAVDPAHQLGAAEFVRADIRRPEIAKVLAEHDVDTVVHLDVTGTAIGGGGRTSVKETNVIGTMQLLGACQKSPRISRLVIKSSTSVYGSAPRDPAVFTETTPAKSLPSGGFAKDAVEVEGYVRGFARRRPDVAVCVLRFANILGPRIDSPLTEYLALPVLPTVLGYDPRLQFVHEDDVVDVLRLAAHEPRRATLNSGTFNVAGDGVLLLSQCARRLGRPTVPVLLPAVTWVGTALRTVGITDFAPEQIRLLTHGRVVSTVQTRELLGFSPRYTTAEAFADFARHRGPGLLPPERLAGAVDRIAERLGAPTARPAGSVPPAHPVSVHPVHSVHDGA
>NZ_CP029195.1|WP_150505115.1|4542271_4543357_+|acyltransferase-family-protein
MADAKVIPFDDDRSRARRRPPGRAEGEAAAVRALPGPQQGPQGPQGPEEVPGGGGREAGADGAAGEASGGDAGVEAGAGASAGGWERRLAGGLAFLRRRITGDYEVDEFGYDEELTDQVLMSLLRPLYEKYFRVEVKGVENIPAEGGALIVANHSGTLPLDGLMMQVAVHDHHPAGRHLRLLAADLVFVLPVVNELARKAGHTLACAEDAERLLRAGEIVGVMPEGFKGIGKPFGERYKLQRFGRGGFVSTALRAGVPIVPCSIVGAEEIYPMVGNAKTLARLLGLPYFPLTPTFPWLGPLGALPLPTKWTIQFGEPIPTDSFAPEAAEDPMLMFNLTDQVREQIQHTLYKLLVQRRSVFF
>NZ_CP029195.1|WP_150505117.1|4543417_4544656_-|hypothetical-protein
MIANVSAHRRANAFAQALEDRESEGAAAEQTEATAEPAEQGKLLALASGLGDLPKPQLDPEVKVVQRAQLVAAMEAMLMEGSAAAAPTVPEQRTAGAKGAHRASPLRKLRPRSRWTKGLAAGGLTVGVAAGAFGGVAAASSDALPGDSLYGLKRGMEDIKLGMADDDADRGGIYLDQASTRLSEARRLMERGRSGDLDHESLSEIRRVLGGMKHDATEGHRLLRQAYERDGEIAPMARLNSFAQAHRDTWNGLRDRLPVQLADVGSEVTHVFDAMDEEVEPLQSVLPRTPEKGAISTETPSGRPSTSRDPQGTDTQRPESPHEAPPAGSHSAQPHPSGPATGTGPSADGSTDSPEDDGLLGGSAGGLLKPSPSGAPTAPLDGPKPPEVPDVTIPPLLPGLLPGLGIDSEDAR
>NZ_CP029195.1|WP_015034387.1|4544954_4545740_-|sigma-70-family-RNA-polymerase-sigma-factor
MYPHVGVDTSGLATLRATVLDHLRGFVPTAYAGPVPAFAFAAPAPAGPCYALADGSAAVGRRGARSGTSTTARRPTADSDSARMMDLVERAQAGEAEAFGRLYDQYSDTVYRYIYYRVGGKATAEDLTSETFLRALRRISTFTWQGRDFGAWLVTIARNLVADHFKSSRFRLEVTTGEMLDANEVERSPEDSVLESLSNAALLDAVRRLNPQQQECVTLRFLQGLSVAETARVMGKNEGAIKTLQYRAVRTLARLLPDDAR

Crispr_ID: NZ_CP029195_9

• CRISPR_ID: NZ_CP029195_9
• CRISPR_location: 4773789-4773887
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_9

Consensus_repeat	Method
GCCCGGCCCGTACGGGCAGCAGCC	CRISPRCasFinder

spacers of NZ_CP029195_9

>9.1|4773813|51|NZ_CP029195|CRISPRCasFinder
ACAGCCGGGTTACGGCTACCCGCAGCAGGGCCAGCCCGGTCAGCCGGGGCA

CRISPR arrays and Neighbor proteins around NZ_CP029195_9

CRISPR arrays

The CRISPR arrays of NZ_CP029195_9

>merge|NZ_CP029195|9|4773789-4773887|CRISPRCasFinder
GCCCGGCCCGTACGGGCAGCAGCCACAGCCGGGTTACGGCTACCCGCAGCAGGGCCAGCCCGGTCAGCCGGGGCAGCCCGGCCCGTACGGACAGCAGCC

>NZ_CP029195|9|9|4773789-4773887|CRISPRCasFinder
GCCCGGCCCGTACGGGCAGCAGCC	ACAGCCGGGTTACGGCTACCCGCAGCAGGGCCAGCCCGGTCAGCCGGGGCA
GCCCGGCCCGTACGGACAGCAGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_015034175.1|4761262_4762141_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|223390
NZ_CP029195.1|WP_150505368.1|4762741_4763611_+|TatD-family-deoxyribonuclease	unknown	unknown	gnl|CDD|238635
NZ_CP029195.1|WP_150505377.1|4766840_4767815_-|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|380207
NZ_CP029195.1|WP_150505373.1|4765066_4765942_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NZ_CP029195.1|WP_150505387.1|4778391_4779435_+|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl|CDD|238341
NZ_CP029195.1|WP_150505375.1|4765938_4766844_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl|CDD|235110
NZ_CP029195.1|WP_150505379.1|4768063_4769359_+|acyltransferase-family-protein	unknown	unknown	gnl|CDD|376607
NZ_CP029195.1|WP_150505385.1|4775509_4777372_+|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|370676
NZ_CP029195.1|WP_150160699.1|4783241_4784084_+|trans-aconitate-2-methyltransferase	unknown	unknown	gnl|CDD|184509
NZ_CP029195.1|WP_041663945.1|4781821_4782622_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP029195.1|WP_150505389.1|4779431_4780421_+|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl|CDD|187558
NZ_CP029195.1|WP_150505366.1|4762279_4762699_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150505371.1|4763682_4764969_+|DUF348-domain-containing-protein	unknown	unknown	gnl|CDD|226111
NZ_CP029195.1|WP_150505391.1|4780417_4781557_+|galactokinase	unknown	unknown	gnl|CDD|223231
NZ_CP029195.1|WP_150508367.1|4777588_4778272_+|response-regulator	unknown	unknown	gnl|CDD|225107
NZ_CP029195.1|WP_015034158.1|4782580_4783078_-|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP029195.1|WP_041663944.1|4786022_4786706_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP029195.1|WP_150505364.1|4759446_4761201_-|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl|CDD|224839
NZ_CP029195.1|WP_150508368.1|4784146_4785790_-|VCBS-repeat-containing-protein	unknown	unknown	gnl|CDD|379232
NZ_CP029195.1|WP_150505381.1|4771694_4773500_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223562

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_015034175.1|4761262_4762141_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl|CDD|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	3.38842e-110
NZ_CP029195.1|WP_150505368.1|4762741_4763611_+|TatD-family-deoxyribonuclease	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	7.89603e-92
NZ_CP029195.1|WP_150505377.1|4766840_4767815_-|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|380207	NF033206, ScyE_fam, ScyD/ScyE family protein. This family includes ScyE, a protein involved in scytomenin biosynthesis and export, and its paralog ScyD. Some members of the family contain a C-terminal PEP-CTERM domain that predictions anchoring to the outer membrane.	1.95426e-06
NZ_CP029195.1|WP_150505373.1|4765066_4765942_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	2.26093e-131
NZ_CP029195.1|WP_150505387.1|4778391_4779435_+|galactose-1-phosphate-uridylyltransferase	gnl|CDD|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	3.43656e-112
NZ_CP029195.1|WP_150505375.1|4765938_4766844_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl|CDD|235110	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	2.27629e-148
NZ_CP029195.1|WP_150505379.1|4768063_4769359_+|acyltransferase-family-protein	gnl|CDD|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	2.12653e-12
NZ_CP029195.1|WP_150505385.1|4775509_4777372_+|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|370676	pfam09770, PAT1, Topoisomerase II-associated protein PAT1. Members of this family are necessary for accurate chromosome transmission during cell division.	2.20281e-12
NZ_CP029195.1|WP_150160699.1|4783241_4784084_+|trans-aconitate-2-methyltransferase	gnl|CDD|184509	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional.	2.03321e-119
NZ_CP029195.1|WP_041663945.1|4781821_4782622_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.03417e-42
NZ_CP029195.1|WP_150505389.1|4779431_4780421_+|UDP-glucose-4-epimerase-GalE	gnl|CDD|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.34143e-171
NZ_CP029195.1|WP_015034158.1|4782580_4783078_-|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.5193e-18
NZ_CP029195.1|WP_150505371.1|4763682_4764969_+|DUF348-domain-containing-protein	gnl|CDD|226111	COG3583, COG3583, Uncharacterized protein conserved in bacteria [Function unknown].	8.76431e-51
NZ_CP029195.1|WP_150505391.1|4780417_4781557_+|galactokinase	gnl|CDD|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	4.46558e-127
NZ_CP029195.1|WP_150508367.1|4777588_4778272_+|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.44428e-33
NZ_CP029195.1|WP_041663944.1|4786022_4786706_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.8947e-20
NZ_CP029195.1|WP_150505364.1|4759446_4761201_-|phospholipid-carrier-dependent-glycosyltransferase	gnl|CDD|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	7.85473e-29
NZ_CP029195.1|WP_150508368.1|4784146_4785790_-|VCBS-repeat-containing-protein	gnl|CDD|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	9.15715e-07
NZ_CP029195.1|WP_150505381.1|4771694_4773500_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	1.42769e-165

Protein sequences

>NZ_CP029195.1|WP_150505381.1|4771694_4773500_+|ATP-binding-cassette-domain-containing-protein
MAVNLVNVEAVSKVYGTRALLDGVSLGVSEGDRIGVVGRNGDGKTTLIRMLAKLEEADTGRVTHSGGLRLGVLTQHDSLDPKATIRHEVIGVMADHEWAGSAKIRDVLTGLFGGLDLPGFENGLDTVIGPLSGGERRRIALAKLLIEDQDLIVLDEPTNHLDVEGIAWLAKHLQDRRSALVCVTHDRWFLDQVCTRMWDVQRGAVHEYEGGYSDYVFARAERERIAATEETKRQNLMRKELAWLRRGAPARTSKPRYRIEAANELIADVPPPRDTSELMKFANARLGKTVFDLEDVTVTAGPKTLLQHLTWQLGPGDRIGLVGVNGAGKTSLLRALADAAVTQGETQPAAGSITVGKTVRLAYLSQDVTELPGTLRVLEAVQQVRDRVDLGKGREMTAGQLCEQFGFSKEKQWTPVGDLSGGERRRLQLLRLLMDEPNVLFLDEPTNDLDIETLTQLEDLLDGWPGSMVVISHDRFFIERTTDKTLALLGDRTLRMLPRGIDEYLERRRAMIEAAVPAPAAAPAQAKAGVSAADARAAKKELQKVERQLDKLSDKEAKLHARIAENATDFELVAKLDAELRELAGEREELEMRWLELAEDA
>NZ_CP029195.1|WP_150505379.1|4768063_4769359_+|acyltransferase-family-protein
MGISARELAAATPATRDRYVDLLRVASLAVVLLGHWLMAAVTADGQVGNLLAVVPGLQVVTWAFQVMPVFFFVGGFSHALAHRSRPRYAAFLRARLQRLLRPTMVFVGVWGAAALVLQLSGADGGLAGVALRLVTQPLWFIGIYLAMVAFTPPLLRLHERWGWGAFAALVGGAVAVDVLRFAADVPFVEFLNFAFVWLAVHQLGFLRADGMIRRPALLAGAGLLGATALVALGPYPLSMVGMPGEKVSNMAPPTLALLCHGLWLVGAVELLRGPGARFVARAGVWRAVVAANGVAMTAFLWHLTAMLGVYGAMLGLGTELPAPATAAWWAQVPVRFLAAGLLTALLVAVFRRFEAPVPPAPASDAGGPVAAAGITLALLGVLGLSLTGFGGLLTGHAATLIAVPVTAPAAVAMALVGWLLVERAGRTAGRD
>NZ_CP029195.1|WP_150505377.1|4766840_4767815_-|SMP-30/gluconolactonase/LRE-family-protein
MPRHPRLAAVAAATAALAVVAAGPATAGDPTVSDPRVVAHFDVAAGQNAENIALEPDGSADITFVFARQVARVTKEGVTTILATLPEVPDAQTPVGGAVVLGIARAHDGTLYVAYATGTAETGIWRIGPDGGAPEQIAQLPADSFPNGLALDEKCATLYSADSARGVVWSVPLDGGDPTVWASGAALEPTAEIPFGANGIKVHGGAVWVSNSARATLLRIPVGPGPDRAAGPVETRSTGLTGIDDFAFTGHGDTVLAALNQVDKLELVRPDGTHKTVLTGADGLDNPTSVAVRAKTVYVNSAAFFNAQDPDPNLLLARITKNKR
>NZ_CP029195.1|WP_150505375.1|4765938_4766844_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MSAPGSVTVRVPAKVNVQLAVGAARPDGFHDLANVFLAVSLYDEVTATPAAGLTITCEGPDADKVPLDRTNLAARAAELLAARHGISPDVHLHIRKDIPVAGGMAGGSADGAGALLACDALWGLDTPREVLLEICAELGSDVPFSLVGGAALGTGRGERLTELPVGGGFHWVFAAADGGLSTPAVYGEFDRLTEGVEVPVPAASPLLLDALRTGDTTALAAALANDLQAAALSLRPSLAATLAAGTDAGALAALVSGSGPTTAFLVKDAETAAAVAAALTASGTCRTARTATSPAPGATVL
>NZ_CP029195.1|WP_150505373.1|4765066_4765942_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSTTTGPESPDALLGPADIRELAAALGVRPTKQKGQNFVIDANTVRRIVRTAEVRPDDVVVEVGPGLGSLTLALLEAADRVTAVEIDDVLAAALPSTIAARMPARADRFALVHSDAMHVDELPGPPPTALVANLPYNVAVPVLLHMLERFPSIERTLVMVQAEVADRLAAKPGNKVYGVPSVKANWYAEVKRAGAIGRNVFWPAPNVDSGLVSLVRRTEPLATTATRQEVFAVVDAAFAQRRKTLRAALATWAGSPAAAEEALVKAGISPQARGEGLTVEEFARIAEAKQK
>NZ_CP029195.1|WP_150505371.1|4763682_4764969_+|DUF348-domain-containing-protein
MSTSQGSHRAGRRAAALPVHDQPTQEAPLVAPGLVPEQGARAGSRAGTRAGARRAARRRKASGPAGEGLRRLVPQALVVAFLAGGTSAFVADDKAVRLSVDGVPRTLHTFADDVDELLADEGLAVGSHDIVAPAPAEALASGDEIVVRYGRPVALTLDGQRRQVWTTARTVEGALHQLGVRAEGAYLSVSRGAAISRQGLALDVRTERTVTFLADGRERTVRTNAATVREALTEAGITLSGQDATSVAPDSFPRDGQTVNVLRITGSRQVREEAIPYAVEKVRDPELFAGSEVVERQGVTGVRRVTYSLRTVNGVRQKPRRTAEEIVREPVSRRVRVGTRPLPTSVAGADGLDWGALAACESGGRPNAVDPSGTYGGLYQFDPGTWRSLGGSGTAQNAPAAEQTFRAKKLYVQRGASPWPHCGRRLFR
>NZ_CP029195.1|WP_150505368.1|4762741_4763611_+|TatD-family-deoxyribonuclease
MSAKDAPPPLPEPLLVEVADSHTHLDLQSGTVEEALVKAAAVGVTTVVQVGCDVKGSQWAAETAAAHEHVHAAVALHPNEAPRIVLGDPDGWSRQGAREGGGDAALDDALTEIDRLAALPHVRGVGETGLDFFRTGPEGIAAQERSFRAHIEIAKRHGKALVIHDREAHADVLRVLDEEGAPERTVFHCYSGDAAMAEICAAKGYYMSFAGNVTFKNAQHLRDALAVAPLELVLVETDAPFLTPAPYRGRPNAPYLIPVTLRAMAEVRGIGENEMAEAIAVNTARAFDY
>NZ_CP029195.1|WP_150505366.1|4762279_4762699_+|hypothetical-protein
MTEITGTGISVAHEAYAFACMRCGYGWEQAYDIEHHVDAAGHAFVVYKAEGERVPSPLSSPTCMNCGAHVVRIMRAGQVSSVLDLIAATEKHRSGARPTKPVSPAGPIGQELTEDGPERPPVPHHWHLSDLLHPFRRRQ
>NZ_CP029195.1|WP_015034175.1|4761262_4762141_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MTGTLVLAGTPIGDIADAPPRLATELENADIVAAEDTRRLRGLTRALGIHTSGRVVSYFEGNESARTPELVEALVGGARVLLVTDAGMPSVSDPGYRLVAAAVEQDIKVTAVPGPSAVLTALALSGLPVDRFCFEGFLPRKAGERLGRLREVADERRTLVYFEAPHRLDDTLAAMAEVFGAERRAAVCRELTKTYEEVKRGPLAELAAWAAEGVRGEITVVVEGAPETGPAELDAEELVRRVRVREEAGERRKEAIAAVAADAGLPKREVFDAVVAAKNAAVSSHGNGKGLI
>NZ_CP029195.1|WP_150505364.1|4759446_4761201_-|phospholipid-carrier-dependent-glycosyltransferase
MTSTAPEALEGQRPMAETVAEPSSWQKRLRRFGYAPPAASAAPIGLRERLVPPYVRPSARVMSLLGIGPERAERLWRLMAWGGPLLVTAVAGLLRFWNLGKPRAVIFDETYYAKDSWALINQGYEGAWPKDIDKTILSDPGAVLVPTDPGYVVHPPMGKWMIGLGEKMFGFEPFGWRFMVALLGTLSVLMLCRIGRRLFRSTFLGCLAGLLLAVDGLHFVMSRTALLDQVLMFFVLASFGCLVLDRDRTRKRIAAALSEDEEGVLRPDAEVAESLRLGWRPWRIAAGVMLGLAAATKWNGLYVMVAFGLMTVVWDVGGRRTAGAVRPYLAVIRKDLVPAFVSVVPVAIATYLVTWTGWIVSDKGYFRNWAADQDKVGGGGTWGWLPQWLRSLWHYESEVYTFHVGLTSPHTYESNPWSWIVLGRPVSYFYESPAPGTGGCPAGTREKCAAEVLALGTPLLWWAACLAILYVLWRWAFRRDWRAGAIACGIAAGWVPWFLYQERTIFLFYAVVFVPFLCLAVAMMLGAIVGPAGSSERRRTFGAVAAGCVVLLIVWNFIYFWPIYTGTPIPLDQWRNRMWLDTWV
>NZ_CP029195.1|WP_150505385.1|4775509_4777372_+|PQQ-binding-like-beta-propeller-repeat-protein
MTQPPPPPPNQPPDPPQGGFGAPTPPPPQQQPEPGYGYPQPPQSAPGYGYPQQPEPGYGYPQQPQPDPGQGYPQQPPTQPQQPYGGGYQQPAQPPYGYPAPQQPPYGGYQQPAPTTVQAPAAGGGRGKLSAQLQIVIAAVVAVVLIVGAGIWYANSGGEGKDDEAKGTGGTSQGTGGGDGGKTGGANSGLGGDGKEKASGNTSAKLAFSVPAPTVPDVTDFSGSWLTDKAYVKTGLNSVVGYDRDKGTVLWTLPLTGQVCGASRHKTADNKVPILFEAKKRVAPRYFQQCTEVGMVDLVTGKLLWSTSVTGGTAGDQKVRFSEVSLSGKTVAAGGTDGGAAFDVANGNPRWKPQANDQGCYDLGYGGGEGLVAVRKCGSSYDSQYVMVQNLDPVSGAPISQYKMPTGVKYASVVSTKPLVVAADVGETAGDGSGISDFFSIDEKTGKLKAKITADADQYAGRCRSTKVESCQYVLVGNGRLYVPTEEHEGSTGEYGDETNEIIAFDLATGRTVPEKADAGDKYNLVPLRMDGGDLIAYKEPPYDKGGRIVSINGGTMKETLLLENPGERSIREMETSFSLNGAELLYGEGRLFIAGTLVSKARSGSTDKRYLVVSYGVGH
>NZ_CP029195.1|WP_150508367.1|4777588_4778272_+|response-regulator
MGVRLVVVDDHRLLAEALASALKLRGHRVLAAAAPVAGAAELVVSRAPEVCLLGTAAPAEPGAFDPVVRIKRERPQVAVVVLGPVPSPRGIAAAFAAGASGYVRHDERIEGVERALVKARAGESAVAPQLLQAAFAELLHPSAQPDDEGQRLLRLLTQREVEVLVRVAEGEDTRLIAAGMGIAPSTARTHVQRVLMKLGVGSRLEAAALAARTGLLDRALPGPRGTF
>NZ_CP029195.1|WP_150505387.1|4778391_4779435_+|galactose-1-phosphate-uridylyltransferase
MKKTVTTLADGRELIYYDTREDTVRTAVDRRPLTPVDSRSEIRLDALTGDHVAIASHRQARTYHPPADACPLCPARDGRESEIPEESYEVAVFENRFPSLSGGVGRCEVVCFTDDHTQSFADLTEERVSLVLDAWTDRTGALSALPGVEQVYCFENRGAEIGVTLPHAHGQIYAFPYVTPRTAAMRRRIDEHRAETGRNLFDDVVDRERADGDRVVLETEHWIAFVPYAAHWPYEVHLHPKRRVPDLLALDGAVRTECAQVYLELLRRFDRIFGPDEPPTPYIAAWHQAPFTDARREDFGLHLELFTVRRASGKLKFLAGTESGMDAFMNDVRPEDAARRIREVASA
>NZ_CP029195.1|WP_150505389.1|4779431_4780421_+|UDP-glucose-4-epimerase-GalE
MTQRYLVTGGAGYVGSVVAAHLLERGHRVTVLDDLSTGFAEAVPAGAEFVRGRVQDAARWLDGSYDAVLHFAAFSQVGESVTQPEKYWENNVGGTMALLAAMRAAGVRRLVFSSTAATYGEPASVPITETAATAPTSPYGASKLAVDHMIGGECAAHGLSAVSLRYFNVAGAYGSLGERHAPESHLVPLVLQVALGDREAISVYGEDYPTPDGTCVRDYIHVADLAEAHLLALDAMTAGGVPAGEHLICNLGNGNGFSVREVVETVRKVTGHPIPEITAPRRAGDPAVLVASAEAARERLGWTPSRPDLADVVADAWAFARARQERDHA
>NZ_CP029195.1|WP_150505391.1|4780417_4781557_+|galactokinase
MTVAADFEALYGTAPDGVWAAPGRVNLIGEYTDFNDGFVLPLALPHTTVAAVSRRDDGVLRLHSADVDGGIVQLAVDALEPLSGGGWAAYPAGVVWALREAGHPVAGADVHLTSTVPTGAGLSSSAALEVVIALALNDLFGLGLSRPGLARLAQRAENAFVGVPCGVMDQMASACAEEGHALHLDTRDLSCRQVPFDLAREGLRLLVVDTRVKHALGDGAYAERRAGCEAGARALGARSLRDVSAAHLPEALARLGDETIRRYVRHVVTDNARVERTIALLDAGDVRAVGPVLTEGHASLRDDLRVSCPELDLVVEAADAAGALGARMTGGGFGGSALVLVDTDRADEVATAVTKAFAEAGHAAPGVFPAVPSAGARRL
>NZ_CP029195.1|WP_041663945.1|4781821_4782622_+|response-regulator-transcription-factor
MARIRVLVVDDHRVFAESLAAALAAEPDVDVAAAGSGPAALRCLERGAAEGRRFDVLLVDAELGAGPVGAVARAVPDDPEGAVDGISLVAGVRGVQPSVRTVVLAEKDDPHRAALALQAGASGWVAKDCSLQRLLAVVRGVLRDETHLPPALLTGVLRELTAARKHRTDSERLVESLTPREREVLRCMVAGLGRKAVAERLFLSPHTVRTHMQNVLGKLGVHSTLAAVALARRAGVGPAQLGEAPLAAIPGPGLAGDVVERGGQLA
>NZ_CP029195.1|WP_015034158.1|4782580_4783078_-|MarR-family-transcriptional-regulator
MEDEVDRLVAAWRRERPDLDVEPLEVLSRVSRLARHLDRARRLAFSEHQLEPWEFDVLTSLRRAGAPYQLSPGQLLTQTLVTSGTMTNRIDRLTKKGLVERLPDPSDRRGVLVRLTAEGRDRADEALAGLLAQERAILAQLSRGQRGELAALLRQLTAPFDNVPG
>NZ_CP029195.1|WP_150160699.1|4783241_4784084_+|trans-aconitate-2-methyltransferase
MHSVETAAPSAPTWDPQQYLRHSGHRTRPFLDLLARIPHLPAQDRPARIADLGCGPGNVTVLLADRWADAHITGFDLSPDMLERAGKDWSGTTRGGGWIDFRPADAAHWTPTEPYDLIVSNAALQWVPNHPESFAAWIDGLRPGGTLAFQVPGNFTSPSHALLGQLCETPEWRARLGDQGRRFVHILDASDYLTRLTDLGCETDVWETTYCQLLQGEDPVLDWVKGTALRPVLTTLGDDQEAVDAFLGQYRDLLREAYPPGPYGTVFPFRRIFAVARKSS
>NZ_CP029195.1|WP_150508368.1|4784146_4785790_-|VCBS-repeat-containing-protein
MLLAGPASAGTPAPVPSAEKKASAFTPPTLHLPKKDGARAGVAAAGAVPLTLSDLDQDGIDDLIFRAVDGELYSSPSTAANSTFDLFRFEDVPKDIIPIGNQGGNTAEPEVLVLSENGTLTLYSDADPAGTPYSSVVGGGWQVYNKVVSPGDVNGDGRADVVARTLDGALYLYLGTGSASQPLSPRTPIGGGWNMYDQLVGLGDANGDGNADLYARDTVGTGTLWFYPGTGDRTKPFGTRKSVGGGWNLYNQILPGGGGDVIARDAVGTLFHYRANGNGTLAARQPFSATGDTAGITQFAGAGNIPYTGKGGVAATTPGGALYYYGNSTTGKLESRYHVENAGDVRGLSFANLSSLNADGFSDLAVRVDGDPDGTLWIEAAEIGGGWGIYNALVGPGDLSGDGKGDLLARDRSGVLYLYKGNGKGSGFAGRIRVGSGWGAYNAILGAGDYTGDGRTDLVARTSGGDLYLYAGTGVAASPFKSRVKIGSGWNTYSKLIAPGDLNADGKGDLLGTASNGDVYRYLGTSPGKFSARARIGTGFGIYNSLS
>NZ_CP029195.1|WP_041663944.1|4786022_4786706_-|TetR/AcrR-family-transcriptional-regulator
MEDVAIDGRTGSTGSGEQKPRRGRRVRMTGAERREQLLDIGRTLFAEKGFEGTSVEEIAAKAGVSKPVVYEHFGGKEGLYAVVVDREMRQLLDGVTGALTAGHPRELLEQAAFALLDYIENYTDGFRILVRDSPVAQSTGTFASLISDIATQVEDILGLEFKARGFDPKLAPLYAQALVGSVALTGQWWLDVRKPKKAEVAAHLVNLAWHGLDGLEPKPRLIGHRKS

Crispr_ID: NZ_CP029195_10

• CRISPR_ID: NZ_CP029195_10
• CRISPR_location: 5543868-5543972
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_10

Consensus_repeat	Method
ATCCCCTGTAGCTCAATTGGCAGAGCA	CRISPRCasFinder

spacers of NZ_CP029195_10

>10.1|5543895|51|NZ_CP029195|CRISPRCasFinder
GCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAGCGCG

CRISPR arrays and Neighbor proteins around NZ_CP029195_10

CRISPR arrays

The CRISPR arrays of NZ_CP029195_10

>merge|NZ_CP029195|10|5543868-5543972|CRISPRCasFinder
ATCCCCTGTAGCTCAATTGGCAGAGCAGCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAGCGCGATCCCCTGTAGCTCAATTGGCAGAGCA

>NZ_CP029195|10|10|5543868-5543972|CRISPRCasFinder
ATCCCCTGTAGCTCAATTGGCAGAGCA	GCCGGCTGTTAACCGGCAGGTTACTGGTTCGAGTCCAGTCGGGGGAGCGCG
ATCCCCTGTAGCTCAATTGGCAGAGCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_015033446.1|5559147_5559564_-|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl|CDD|274649
NZ_CP029195.1|WP_150506225.1|5540109_5541843_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP029195.1|WP_150506237.1|5556856_5558911_-|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl|CDD|274561
NZ_CP029195.1|WP_150506223.1|5538184_5540110_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224055
NZ_CP029195.1|WP_015033454.1|5543386_5543698_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150506217.1|5532558_5533821_+|oxidoreductase	unknown	unknown	gnl|CDD|170080
NZ_CP029195.1|WP_150160323.1|5541917_5543357_-|sugar-kinase	unknown	unknown	gnl|CDD|198375
NZ_CP029195.1|WP_150506219.1|5533843_5535736_+|DNA-primase	unknown	unknown	gnl|CDD|235551
NZ_CP029195.1|WP_150506215.1|5530291_5531062_+|sirohydrochlorin-chelatase	unknown	unknown	gnl|CDD|225049
NZ_CP029195.1|WP_150508405.1|5544921_5551344_-|hypothetical-protein	unknown	unknown	gnl|CDD|274730
NZ_CP029195.1|WP_150506227.1|5544447_5544849_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150506229.1|5552952_5553384_-|amphi-Trp-domain-containing-protein	unknown	unknown	gnl|CDD|275149
NZ_CP029195.1|WP_041663846.1|5535943_5536894_+|RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|235640
NZ_CP029195.1|WP_150506221.1|5536912_5538163_-|TerD-family-protein	unknown	unknown	gnl|CDD|376767
NZ_CP029195.1|WP_150506235.1|5554782_5556207_-|DUF2252-domain-containing-protein	unknown	unknown	gnl|CDD|313268
NZ_CP029195.1|WP_150506239.1|5559672_5560155_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP029195.1|WP_150506231.1|5553465_5554143_-|GAP-family-protein	unknown	unknown	gnl|CDD|378566
NZ_CP029195.1|WP_150508406.1|5556242_5556599_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015033462.1|5531097_5532417_+|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl|CDD|235098
NZ_CP029195.1|WP_150506233.1|5554184_5554601_-|SHOCT-domain-containing-protein	unknown	unknown	gnl|CDD|378276

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_015033446.1|5559147_5559564_-|organic-hydroperoxide-resistance-protein	gnl|CDD|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	4.37991e-60
NZ_CP029195.1|WP_150506225.1|5540109_5541843_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.04354e-163
NZ_CP029195.1|WP_150506223.1|5538184_5540110_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP029195.1|WP_150506235.1|5554782_5556207_-|DUF2252-domain-containing-protein	gnl|CDD|313268	pfam10009, DUF2252, Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.	4.52709e-168
NZ_CP029195.1|WP_150506217.1|5532558_5533821_+|oxidoreductase	gnl|CDD|170080	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional.	5.43939e-72
NZ_CP029195.1|WP_150160323.1|5541917_5543357_-|sugar-kinase	gnl|CDD|198375	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases. This subgroup is composed of D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17) from bacteria and eukaryota. They share high sequence similarity with Escherichia coli xylulokinase (EcXK), which catalyzes the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. Some uncharacterized sequences are also included in this subfamily. EcXK exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ might be required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	9.03446e-120
NZ_CP029195.1|WP_150506219.1|5533843_5535736_+|DNA-primase	gnl|CDD|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP029195.1|WP_150506215.1|5530291_5531062_+|sirohydrochlorin-chelatase	gnl|CDD|225049	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism].	1.59041e-28
NZ_CP029195.1|WP_150508405.1|5544921_5551344_-|hypothetical-protein	gnl|CDD|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	1.03085e-17
NZ_CP029195.1|WP_150506233.1|5554184_5554601_-|SHOCT-domain-containing-protein	gnl|CDD|378276	pfam09851, SHOCT, Short C-terminal domain.	1.48604e-05
NZ_CP029195.1|WP_150506229.1|5552952_5553384_-|amphi-Trp-domain-containing-protein	gnl|CDD|275149	TIGR04354, conserved_hypothetical_protein, amphi-Trp domain. This domain usually comprises most of the span of bacterial or archaeal proteins with a length of about 90 amino acids. Some members, however, are extended by one or two copies of domain pfam07411 in the C-terminal region. No residue in this domain is invariant. A striking feature of this domain is a C-terminal region that alternates strongly charged with strongly hydrophobic residues and usually ends with a Trp residue, e.g. LEIEIEW or FEIKVRW, suggesting an amphipathic beta strand structure. We suggest the name amphi-Trp for this domain. Some members of this function occur regularly in genomic contexts that include putative kinases of unknown specificity related to (but distinct from) HPr kinase, a Ser-specific protein kinase. The function is unknown.	6.21595e-15
NZ_CP029195.1|WP_041663846.1|5535943_5536894_+|RNA-polymerase-sigma-factor	gnl|CDD|235640	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional.	9.87636e-163
NZ_CP029195.1|WP_150506221.1|5536912_5538163_-|TerD-family-protein	gnl|CDD|376767	pfam02342, TerD, TerD domain. The TerD domain is found in TerD family proteins that include the paralogous TerD, TerA, TerE, TerF and TerZ proteins It is found in a stress response operon with TerB and TerC. TerD has a maximum of two calcium-binding sites depending on the conservation of aspartates. It has various fusions to nuclease domains, RNA binding domains, ubiquitin related domains, and metal binding domains. The ter gene products lie at the centre of membrane-linked metal recognition complexes with regulatory ramifications encompassing phosphorylation-dependent signal transduction, RNA-dependent regulation, biosynthesis of nucleoside-like metabolites and DNA processing linked to novel pathways.	1.63614e-22
NZ_CP029195.1|WP_150506239.1|5559672_5560155_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.11244e-23
NZ_CP029195.1|WP_150506231.1|5553465_5554143_-|GAP-family-protein	gnl|CDD|378566	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein. SAP is a transmembrane transport protein with six predicted transmembrane helices, with a hydrophilic domain between helices 3 and 4. This hyrodphobic region is highly variable among identified Gap-like (GPL, peptidoglycolipid, addressing protein) proteins and may be involved in substrate recognition. SAP also belongs to the LysE protein superfamily (pfam01810), whose members have been implicated in small molecule transport in bacteria. Other Gap proteins export metabolites across the cell membrane so it is possible that Sap specifically may be involved in transport of sulfolipid-1 across the membrane.	1.31673e-21
NZ_CP029195.1|WP_015033462.1|5531097_5532417_+|deoxyguanosinetriphosphate-triphosphohydrolase	gnl|CDD|235098	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP029195.1|WP_150506237.1|5556856_5558911_-|phospholipase-C,-phosphocholine-specific	gnl|CDD|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	0

Protein sequences

>NZ_CP029195.1|WP_015033454.1|5543386_5543698_-|hypothetical-protein
MRYKLTFVVGLALGYVVGTRAGRERYEQMKKSAKDLARNPAVRNAAESAAQTGRQVAGKAAHVVGDKVGDRLPSSVTDRFHALSGRGGANGKVEEDDWGTSNT
>NZ_CP029195.1|WP_150160323.1|5541917_5543357_-|sugar-kinase
MGIVAGLDSSAEFTRIVVCDTDTGAVLRQGYAPHPGEPKAVDVDPQTWLLSLGEAATGGLLEGVQAIGVSAQQHGLVPLDAQGGLVRPALVRNDKRAQVAAADLVESLGGRQAWAEAVGSVPGAGQPVAKLRWLARTEPEHAARVAMILQPHDWLVWQLLGRPARRTTDRGAASGTGYWSARTGSYRPDLVELALGHQAVLPEVLGPAEAAGTTPEGLLISAGTGETMAAALGLGLGPGDAVVSLGASGSVMAVHHEALSDPRGMITSFADATGMHLPVVHTSNAVRTLRGTAEMLGVESLEELSALALKSTPGASGLVLLPYLEGERTPSLPHSAGTLSGLRRESMKPEHLARASFEGMLCGLTDAMDVLRGRGVEVRRVFLLGAAAALPAVQALAPALFGAQVVVPQPADYAALGAARQAAWALGVARGTLSPSAPPAWQGAAAQILEPGEDLAAGQAVRQQYVATRDQLHPGAFGS
>NZ_CP029195.1|WP_150506225.1|5540109_5541843_-|ATP-binding-cassette-domain-containing-protein
MLIRLLRTHLGPYRKPIALLVFLQFLQTCASLYLPTLNADIIDNGVVDGDTGYILRFGALMVGVSVVQVVCNIGAVFYGARTASALGRDVRAAVFDRVQSFSARELGHFGAPSLITRTTNDVQQIQMLVLMAFTLMVSAPIMCVGGIVMALGQDVPLSGVLLAVVPVLGISVSLIVRRMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVKDGYEEERFRGANAQLTDVSMATGRLMALMFPVVMTVVNISSVAVVWFGAHRIDSGGMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLATETSVVPPVKPVTKLDRRGYLEVRSADFRYPGAEESVLKDVGLVARPGETTAIIGSTGSGKSTLLGLVPRLFDATGGEVLVDGVDVRELDPRLMAKTVGLVPQKPYLFSGTVATNLRYGKPDATDEELWHALEVAQAADFVRKLENGLNSPIAQGGTNVSGGQRQRLAIARTLVQRPEIYLFDDSFSALDYETDALLRAALAEETADSTVVIVAQRVSTIRDADRIVVLDEGRVVGTGRHQELMADNETYREIVLSQLTEAEAA
>NZ_CP029195.1|WP_150506223.1|5538184_5540110_-|ATP-binding-cassette-domain-containing-protein
MAGPGGRMMAGGGPDQRSMDFKGSGKRLLKQLAPERGALWVMLLAGVLSVAASVIGPKILGRATDLVFAGVIGRQIEGGTKPEAIERLRAAGDSGMADMLSGVDFTPGQGIDFSAVGEVLLLVLGVYVVAGLLMLVSTRMSIKVINRTVYRMREDVQTKLARLPLSYFDKAKRGEVLSRATNDIDNISQTLQQSMGQLINSLLTIVGVLAMMFWISPLLALVALITVPVSVFVAAKIGKRSQPHFVQQWKSTGTLNAHVEEMYSGHNLVKVFGRQEESARDFREQNEALYEAGFKAQFNSGVMQPVMFFISNINYVLVAVVGGLRVASGTLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQEPDAPTGEKVADLKGKVALEGVSFRYEADKPLIEDLSLTVEPGQTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVDIAGMSREQLRTGIGMVLQDTWLFGGTIADNIAYGATREVTRAEIEEAARAAHADRFVRTLPEGYDTVIDDEGAGVSAGEKQLITIARAFLSDPVILVLDEATSSVDTRTEVLIQKAMARLAHGRTSFVIAHRLSTIRDADVILVMENGSIVEQGTHEELLASGGAYSRLYAAQFAQALAEVD
>NZ_CP029195.1|WP_150506221.1|5536912_5538163_-|TerD-family-protein
MMGGMGHMGHMAKGSWVPSVTLRVGAGGVDVAALLLAADGRVRGDADMVFDGQPAHPSGAVRHEQASLVLALHEVEADVERIVIAGSAAGGALAAVAPDGVAVAAHTVAGAPETTAVVLAEFFRESGGWKFAGGGKGYGSGLAALVTEFGVEVADETGAAQQPPEPVAAGPLPLTGVVKMPVRARQAGGASAAGAAPGHGGPPAAGGPFPPADRPYELVGGWEFGPVFEPFTITGDGDQVVTVDDRVPPGPVLVETAHEGRDGYFAVFPLDQRNKDGQYLFSTTLPDFRGSSVTPAPEDRALRLRVRAYHRWVMRVKPVAAARRIEGTLRGYGPEALLYTGGAADLQVHFEGDEDGGGYVGIRCHEVAGHTGLTERPTLLLNRTEPLLHTVPLPPGPLLLLHRADGPWTLTVKELD
>NZ_CP029195.1|WP_041663846.1|5535943_5536894_+|RNA-polymerase-sigma-factor
MPPQRRRPDLGGNGPSSDLFRQYLREIGRIPLLTAEEEVDLARRVEAGLFAEEKLANTPDLDSRLASDLDRLVVLGRIAKRKLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVIRVQRRMLQERGYEPTAEEVAAQLDLAPERVGEVLRLAQEPVSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLRRHLEDVLSTLGERERKVVQLRYGLDDGRPRTLEEIGRIFGVTRERIRQIESKTLGKLRDHAYADQLRGYLD
>NZ_CP029195.1|WP_150506219.1|5533843_5535736_+|DNA-primase
MAGRINDDDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPGHQRGERIRLIEAHKVAAQFYADQLGSPEAEIGRAFLAERGFDQAAAAHFGIGYSPAGWDHLTRYLRGKGFSDKELILSGLSQDGRRGPIDRFRGRLMWPIKDVGGEIVGFGARKLRDDDNGPKYLNTPETPIYKKSQVLYGIDLAKKDIAKVSRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKILRRLLMDNGSARVIFTFDGDSAGQKAALRAFEDDQKFAAETYIAIAPDGMDPCDLRLAKGDEAVVDLVQPRTPLFEFALRQIVKRYDLETPAGRAAALDEAAPVVARIKNIGAQHEVAVQLAGMLGILDTQFVVKRVAQLARWARDRGGKGPERQQGPHRGYDTAAPAPAPSGPALNLRSPAHRTERELLKLALQRPELVSPAFDAYGVDEFTAPPYAAVRQCVQDAGGATGAPADYLDAVREAAPNDTVRALVTELAVETIFAKTVDEAYAGDQLVTVRLRAVDRRIRDVQGTLARLGAQGDPEQLAAVQNELWVLTQYGQSLRNNGAAAL
>NZ_CP029195.1|WP_150506217.1|5532558_5533821_+|oxidoreductase
MVDADQTFVIVGGGLAGAKAAETLRAEGFNGRVILIGDERDHPYERPPLSKGYLTGAKERDSAFVHEAAWYARHDIELHLGQSVTAVDREAHTVRLGDGTVIRYDKLLLATGAEPRRLDIPGTELAGVHHLRRLAHADRLRQVLASLGRDNGHLVIAGAGWIGLEVAAAARGYGAEVTVVESDPTPLHRVLGPELGQLFADLHTDHGVRFHFGARFTEIVGQDGMVLAVRTDDGEEHPAHAVLAAIGAAPRTALAENSGLALVDRADGGGIAVDESLRTSDPDVFAAGDVAAAHHPLLHTRLRVEHWANALNGGPAAARAMLGQHVSYDRVPYFFSDQYDLGMEYSGWAPPGSYDQVVVRGDTGKREFIAFWLKEGRVLAGMNVNVWDVTDPVQQLIRARKPVDPDALADASVPLENLIA
>NZ_CP029195.1|WP_015033462.1|5531097_5532417_+|deoxyguanosinetriphosphate-triphosphohydrolase
MEGITDTSGQDTPADTPGYDSAATERWDTEPDKRPGRTAFQRDRARVLHSAALRRLAGKTQVVTPGTRGHAWDASPRTRLTHSLECAQVGRELGAALGCDPDLVEAACLSHDMGHPPFGHNGEQALNDVAKDCGGFEGNAQSLRLLTRIEPKRFVKDADGELVSVGLNLTRAALDAATKYPWPRGAHPEDPGSPKFGVYEDDLPVFAWIREGAPAHRKCFEAQVMDWSDDVAYSVHDFEDGLHAGHIDPNLLLAEPERADIAAVAIGRYVPEDTDPQELAEALDRLVDQEWWPHGYDGSAVAQARLKDATSQLIGRFCLAAEGATRQAYGSGGLTRYGAELVVPREARNECAVLKAVADRYVMQRPQQEALRADQRIVVAELAEALVARAPDGLEPQFRSLFDAARDDRARKRVIVDQIASLTDASARALHAALRPHHS
>NZ_CP029195.1|WP_150506215.1|5530291_5531062_+|sirohydrochlorin-chelatase
MTEPHTPRRRPTLVAVGHGSRDPRARATLSRLLDRVRELRPGLDVRLAHIELNAPLLDATLAELAAEGRDAGAVLVPLLLAPGHHVTHDLPAALAAVPALRARLAAPLGAHPLLVEALADRLAQAGWTPGDGDSPATGVVLASAGSRDPRSGAETRRIAALLGERLGGVPVLPAYASAAAPTVSEAVRVLTARGRHRIAVASCFTAPGLFATRAAAHAPWIASDPLGAHPALARLVLHRYDTAPRPTTRGRELATV
>NZ_CP029195.1|WP_150506227.1|5544447_5544849_+|hypothetical-protein
MSRYTEVIVLARDAEEVMEPLTKPDENREWHQCFTRVDDNMFAGGGSPSDECYAWVVQFIRRNWTGLLSHLESLPWPHPWSVQVLVRDEDDDCFGLWMLYDGRLAEVPLPRTRREPFSDTIVGVLSRTDRPGY
>NZ_CP029195.1|WP_150508405.1|5544921_5551344_-|hypothetical-protein
MGRGLAIALTTALAVGVIPASAVAESGGRPGLSLPASGQPRAVPVKPVKSGGTAFPDAAALHSWKGAPQVSWPAPGSTDIPLDAAPGTAPVSVSTTPVGPLAQAGVRTSRFTPVGQAPKAGAKVKVTVADRAATRRAGVRGVLLSIDPADARSAADALPATVDALRVAVDYDRFRGAFGGDWAARLRFVELPSCVLSTPQRPECRGQRPLDSVNDTETGEVSAEIPTGRTTVPRTDAAKTAPVSASGATVLAVTADPSGPTGDFKATPLDASASWSAGGSTGALSWNYPLEIPAVPGGLVPAVEIGYNSQSVDGRTGASNNQPSWIGDGWSYEPGFVERRYKSCEQDKVDGTNTTKRFDQCWYSDNAVLHLGGKSTELVYEKDKGWHPEADSGEKVEKLSGAVNGDEGTDGVDGKGEYWKVTTTDGTQYFFGRNRLPGWTDGGTITPEDDSPVTNSTWTVPVFGNQAGEPCYNASFADGWCRQAWRWQLDYVVDTHGNAMAYYWNTEKNNYGRAFDESTGKGVVTSYDRGGWLDRIDYGLRDDAVYTGKPMGQVDFSVAERCLTDCGTFSETTAGNWPDVPYDQYCAAGATECKDQFAPTFWSRKRLTSVTTKVLTGGVHNDVDSWTLTQGFPASGDGISTPMWLSSIQRTGKTGGTATLPPVTFTGEQLPNRVDRVGDRLAPFIRLRMSQITTESGGTIGAYYSPQDCSPADLPPADGTNTTRCFPVKWAYEGNTAQLDWFNSYVVTRVVEGDNLAESPDKVTSYSYLDGASWAKSTDEFTKVEDRTYSVPRGYGRVQTRTGAADDPLTLTETRYFRGIDGASVTDFAGVPATDREQFAGLPRATATFNGDDTSKLVSATSATPWRSTAVATRARPGLPSLVSYKTGIEKEETLTTVSGGTRKTSRTRTFDSYGMVSQTSDLGDVAKPGDESCVTAHFARNTENWLVNRVYRTEVVAGACDGAISRPADVISDNRSFFDGSTTPGTPPTKGDVTRLEQINALGTGYDVTSTVPVTDYDDYGRPLSSTDYYGKKTTTVYTPAGGEVPTRTVTTNPLGHQITTVSDPLRAKPTSVTDANNRVTTTAYDPLGRVVKIWTPNRSAVTYPDSPSHTFGYTVRNDGPNIVTSSSLDHNSVYKTSYVFYDGLLRVRQSQSPSPDGAGRLVSESFYDTRGLAWRTSGTFFATGLAEPALVTGQNLNYPSSTDTEYDGAGRVTAVIAKRFGDETRRTTTTYTGDSTTVVPEQGGTATTTLTDAKGRNKEIRQYTNAGRTSFLATTYSYNKRGLMEQVTDPSGAVWKYGYDVRGRQNHIEDPDKGISDITFDGGDRATDVTNARRVTLHTEYDELGRRTALKQDGTALATWTYDTATGGKGKPAKSTRWIDGRAYEESVTAYNGAYQPVITQLTIPTAPETGALAGTYKWTTSYNANTGQVMWVMQPAVGNLPAEKVANTYSATGGQLNTVGAGSDALVSAMTYDHYGRTVRAEYGAFGKHLWKSFEYDEHTGAVTRTYTDRELAPQRIDATSYTYDPNGNVTSVKTVAGQDAQAVTDTQCFTQDALRQITEAWTVAPSVANGCAAGASAATVGGPDAYWTTYSYGPTGNRKTEVQHKTPSGPTADITRTYAAPVPGSHKLPSVTQTGPAGTATETYQYNETGATKSRKIGTAAEQILEWDSEGHLARTTQGTVVNTYRYDTEGDRLLRTDSSGTTLYLPGGNELKLTKTGTLSGTRHYSAGDTKVAMRTGGKLYFLLADHHGTGTTQVDAVTLGIVRRKTSLFGGPRGPQPGTWQGDRAFVGGVRDADTGLTHLGAREYDPALGRFVSVDPVIDLTDPLQLDGYGYSHNNPITSSDPSGLYDPDVRKYCLANPKQCDGPDRLKHVEPKKRLTADKDGKGKVTKVYDGNGVPHVITDKADPSAAKALDPLNDDLRRAGMYYDPKTGNGVQYLLQDDGEAGKSTIENNAPVKDADGRPVLPETTSDFVKVTWKNGRIESVDTVDATESTRPAAMNQGTINKKLRNQTGTVVFVAKDLAQAEDYAAHFQFNPNVRVIHPGSGFDTHRTPAPTPKTAPGPNVLRGPKSPKGPKARAFGILGSILAVAQAPGYISEYGWGHGSWEMLEDFCDPLNIADDEFIDPWYQRPVEWA
>NZ_CP029195.1|WP_150506229.1|5552952_5553384_-|amphi-Trp-domain-containing-protein
MKDLKFEQKRSMSRLEAADQLAALAAALREGGDVELEYGQGTLSLSIPEELRSEVEVEVGNGEIELEIEFKWPTARARKARESGRGQPAPEEEPAKAPPRRKNAPARTTRTATGTKRTASATKRTSSGTKKTAGSRPPAAKKS
>NZ_CP029195.1|WP_150506231.1|5553465_5554143_-|GAP-family-protein
MVLDLVLIGLAITLYPLPGMALVLVLASPRGVYKGLAFITAWLACLVAVIALVLLCTGGQPPAPRSPPSLASLAATLVIGLSLIVYSEHRRRRSRRVTAAPDDGEGTAGSGRSLASRMDQATGWSAAGLAVLLQPWGMVSAAAATVVKADASHTQSFLALLGFCVLATSTLLAMELYTVFAPENAQRDLTRLRAWLSRHKDRAIVLLCLLLGLWLVGRSLYQLTG
>NZ_CP029195.1|WP_150506233.1|5554184_5554601_-|SHOCT-domain-containing-protein
MKDSMVNLAVDYPLLNMFWTMLMLFLWILWFMLLFRVIGDIFRDDDLNGWGKAGWTVFVILLPFLGVFVYLIARGRSMGERELKRVRQNEEQFRSYVRDTAGTGGGQAEELSRLAELKNSGAITEAEFAQAKAKVLAS
>NZ_CP029195.1|WP_150506235.1|5554782_5556207_-|DUF2252-domain-containing-protein
MPRKGVTALRAAHHATPEERAALGRKARRRSPRSGHAEYRASADRPDPLTILEAQSATRVPELVPIRYGRMTESPFRFYRGAAAIMASDLAGTPRSGLTAQLCGDAHMLNFRLLASPERQLMFDINDFDETLPGPWEWDVKRLAASLVIAARANGFDDAERARIVRHTVRAYREAMIRFAGMRTIDVWYAKIDAARLEALAKDLLAKRGRKDLSRALAKARTRDSLQAFDRLTRTVDGRPVIAADPPLLVPVSDLLPEVRRTALERRFRGLIEQYGATLPSDRRTLLADYRLADVARKVVGVGSVGTRCWIFLLLGRDDGDPLFLQAKEADTSVLAPYAGASAYRNQGERVVSGQRLMQATSDILLGWERVDGIDGRRRDFYVRQLRDWKGIAEPERMLPRGMVAFGDLCGLTLARAHARSGDRIAIAAYLGRGDSFDRALARFAEAYADQNERDHRALVDAVRAGRLPAQDTT
>NZ_CP029195.1|WP_150508406.1|5556242_5556599_-|hypothetical-protein
MFAAVLLSVSGVLAVLQGIAAIAEDDVYARVGSYVFEFDLTSWGWIHLILGILVALTGFGLFKGANWARAAGICLAGLSMIANFLWLPYQPWWAITLLAINVFIIWALCASWSRTTAG
>NZ_CP029195.1|WP_150506237.1|5556856_5558911_-|phospholipase-C,-phosphocholine-specific
MADLDRRRFLQLAGGAAAFTMLSESVARAAAIPAQGSTGTIQDIEHIVVLMQENRSFDHYFGSMKGVRGFGDPRPVTLPSGKSVWNQSDGSKVTLPFRPTSDKLGMEYLQGLNHDWAGGQSAFNKGKYDNWVPAKTKATMAHLTREDIPFHYALADAFTICDAYHCSFIGATDPNRYYMWTGYVGNDGKGGGPVLNNAEAGYGWTTYPERLEAAGVSWKIYQDIGDGLNAAGSWGWINDAFRGNYGDNSLLYFNNYRNAQPGNPLYDKARTGTNAKAGEGFFDILRADVQGGRLPKVSWIAAPEAFSEHANWPSNYGAWYIAQVLDALTSNPDVWARTALFITYDENDGFFDHVVPPYAPGSAAQGLSTAPTTLDYFGGKTGYVAGPYGLGPRVPMIVVSPWSTGGYTCSETFDHTSVIRFMEQRFGVTEPQISPWRRAVCGDLTSAFDFSRTDTTAAPLPPVAGYFPPDKNRHPDFLATAPASGTMPRQERGAKPTRPLKYAPYVDGAADIAAGKFRLTFSGGPAAGAQFYVTSANRTDAPWTYTAEAAKSISDTWNTTYSKGVTDLTVHGPNGFVRRFRSPGKTAVPEVTARHNATTGQLDLTFTNAGTTATVTLTNAYGGTPATLTVAKGATVTRTVDVSAAHRWYDITVTSSASTDYVRRLAGHVETGAPSQSDPAILTY
>NZ_CP029195.1|WP_015033446.1|5559147_5559564_-|organic-hydroperoxide-resistance-protein
MDAIYTAVATANGREGRAVSSDGHIDLPLAHPQALGGNGQGTNPEQLFAAGYAACFASAMNLVARQEKIDITDASITAEVSIGKDPADGGFGLSVVMRAEFPDHLQGAAGAALLEKTHAFCPYSKATRGNIKVDLVVE
>NZ_CP029195.1|WP_150506239.1|5559672_5560155_+|MarR-family-transcriptional-regulator
METLDTAPDEDFLRLDDQICFSLHAATRAFNGVYREALKDLGITYPQYLVMLVLWEHGELPVKGIGERVRLDSGTLSPLLKRLEAAGYVERRRSPEDERSVTVRPTAEGAALREKARGVPRRIAAATGLELGELRDLRERLDALAVRLDGVDPDDLNTCR

Crispr_ID: NZ_CP029195_11

• CRISPR_ID: NZ_CP029195_11
• CRISPR_location: 6277479-6277593
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_11

Consensus_repeat	Method
GCTCATCGCCCGGCCTCCTGCGTCGTGTT	CRISPRCasFinder

spacers of NZ_CP029195_11

>11.1|6277508|57|NZ_CP029195|CRISPRCasFinder
CAGGCTGTGCTCGCCCGGGGGACGACCCCCGGACCCCCAGCAGATGTCGTGGCTGAC

CRISPR arrays and Neighbor proteins around NZ_CP029195_11

CRISPR arrays

The CRISPR arrays of NZ_CP029195_11

>merge|NZ_CP029195|11|6277479-6277593|CRISPRCasFinder
GCTCATCGCCCGGCCTCCTGCGTCGTGTTCAGGCTGTGCTCGCCCGGGGGACGACCCCCGGACCCCCAGCAGATGTCGTGGCTGACGCTCATCGCCCGGCCTCCTGCGTCGTGTT

>NZ_CP029195|11|11|6277479-6277593|CRISPRCasFinder
GCTCATCGCCCGGCCTCCTGCGTCGTGTT	CAGGCTGTGCTCGCCCGGGGGACGACCCCCGGACCCCCAGCAGATGTCGTGGCTGAC
GCTCATCGCCCGGCCTCCTGCGTCGTGTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150507026.1|6274769_6276038_-|tyrosine--tRNA-ligase	unknown	unknown	gnl|CDD|235645
NZ_CP029195.1|WP_150507038.1|6293099_6294317_-|phosphoserine-phosphatase-SerB	unknown	unknown	gnl|CDD|319803
NZ_CP029195.1|WP_150159942.1|6289415_6289826_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_071891204.1|6288477_6289254_+|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|236124
NZ_CP029195.1|WP_041663706.1|6292238_6292442_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150159949.1|6270289_6270664_+|DUF485-domain-containing-protein	unknown	unknown	gnl|CDD|377315
NZ_CP029195.1|WP_150507014.1|6267088_6268393_-|hypothetical-protein	unknown	unknown	gnl|CDD|367110
NZ_CP029195.1|WP_150507024.1|6273903_6274248_-|DUF3099-domain-containing-protein	unknown	unknown	gnl|CDD|378630
NZ_CP029195.1|WP_150159947.1|6274418_6274694_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NZ_CP029195.1|WP_041662209.1|6287754_6288474_+|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|273824
NZ_CP029195.1|WP_015032646.1|6294538_6297157_+|FHA-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NZ_CP029195.1|WP_150507020.1|6272404_6273457_+|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl|CDD|234672
NZ_CP029195.1|WP_150507034.1|6290547_6291948_+|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl|CDD|340897
NZ_CP029195.1|WP_150507022.1|6273505_6273721_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507032.1|6289770_6290484_-|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|225097
NZ_CP029195.1|WP_150507030.1|6279298_6285646_+|hypothetical-protein	unknown	unknown	gnl|CDD|236090
NZ_CP029195.1|WP_150507016.1|6268477_6270016_-|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173799
NZ_CP029195.1|WP_150507036.1|6292477_6292996_+|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|224973
NZ_CP029195.1|WP_150507012.1|6266035_6267079_+|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl|CDD|176247
NZ_CP029195.1|WP_150507018.1|6270660_6272301_+|cation/acetate-symporter-ActP	unknown	unknown	gnl|CDD|271374

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150507026.1|6274769_6276038_-|tyrosine--tRNA-ligase	gnl|CDD|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP029195.1|WP_150507038.1|6293099_6294317_-|phosphoserine-phosphatase-SerB	gnl|CDD|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.72165e-92
NZ_CP029195.1|WP_071891204.1|6288477_6289254_+|enoyl-ACP-reductase-FabI	gnl|CDD|236124	PRK07889, PRK07889, enoyl-[acyl-carrier-protein] reductase FabI.	2.52265e-165
NZ_CP029195.1|WP_150159947.1|6274418_6274694_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.85474e-05
NZ_CP029195.1|WP_150159949.1|6270289_6270664_+|DUF485-domain-containing-protein	gnl|CDD|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	2.26875e-35
NZ_CP029195.1|WP_041662209.1|6287754_6288474_+|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl|CDD|273824	TIGR01830, 3-oxoacyl-_reductase_FabG, 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. [Fatty acid and phospholipid metabolism, Biosynthesis].	2.7509e-126
NZ_CP029195.1|WP_150507024.1|6273903_6274248_-|DUF3099-domain-containing-protein	gnl|CDD|378630	pfam11298, DUF3099, Protein of unknown function (DUF3099). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.15269e-19
NZ_CP029195.1|WP_150507014.1|6267088_6268393_-|hypothetical-protein	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	5.81949e-35
NZ_CP029195.1|WP_015032646.1|6294538_6297157_+|FHA-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.4978e-73
NZ_CP029195.1|WP_150507020.1|6272404_6273457_+|GTP-3',8-cyclase-MoaA	gnl|CDD|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	4.01719e-180
NZ_CP029195.1|WP_150507034.1|6290547_6291948_+|CynX/NimT-family-MFS-transporter	gnl|CDD|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.94927e-125
NZ_CP029195.1|WP_150507032.1|6289770_6290484_-|FCD-domain-containing-protein	gnl|CDD|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.2631e-49
NZ_CP029195.1|WP_150507030.1|6279298_6285646_+|hypothetical-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.32132e-22
NZ_CP029195.1|WP_150507016.1|6268477_6270016_-|S8-family-serine-peptidase	gnl|CDD|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.33331e-58
NZ_CP029195.1|WP_150507036.1|6292477_6292996_+|histidine-phosphatase-family-protein	gnl|CDD|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	1.75692e-48
NZ_CP029195.1|WP_150507012.1|6266035_6267079_+|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl|CDD|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0
NZ_CP029195.1|WP_150507018.1|6270660_6272301_+|cation/acetate-symporter-ActP	gnl|CDD|271374	cd11480, SLC5sbd_u4, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0

Protein sequences

>NZ_CP029195.1|WP_150507026.1|6274769_6276038_-|tyrosine--tRNA-ligase
MTDIVDELKWRGLFAQSTDEDALRKALADGPVTFYCGFDPTAASLHVGHLVQVLTVRRLQQAGHRPLALVGGATGQIGDPRPTAERTLNDPETVANWVNRLRSQIEPFLSFEGENAAVMVNNLDWTAGMSAIEFLRDIGKHFRVNKMLTKDSVARRLESEQGISYTEFSYQLLQGMDFLELYRRYGCTLQQGGSDQWGNLVAGLDLIHRLEPGAEAHALATPLMVKADGTKFGKTEGGAVWLDPEMTTPYAFYQFWLNVDDRDISTYMRILSFKSREELEELEAQTAERPQARAAQRALAEELTTLVHGADQCAAVINASKALFGQGELTELDEATLAAALSELPHARVTELGQVVDLFTEVGLAPSKSGARRTVKEGGAYVNNVKVTAEDAVVSAEELLHGRWLVLRRGKKNLAAIEFAGA
>NZ_CP029195.1|WP_150159947.1|6274418_6274694_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MSWLWAIIVGFVLGLIAKAILPGKQQIPLWLTTVFGILGSVLGNAVATWIGVNDTKGIDWTRHLLQLIGAVAVVGVGDMLWASVKGNRRRA
>NZ_CP029195.1|WP_150507024.1|6273903_6274248_-|DUF3099-domain-containing-protein
MAKRRGSEVFRITGARQGLADDVRGRQRRYVISMTVRTLSVIAAAVLWNVERHVAIVALALGILLPYIAVVIANAGRETAPSLPSTFVPAPVRPALGAGESSAGGDAERPYGRN
>NZ_CP029195.1|WP_150507022.1|6273505_6273721_-|hypothetical-protein
MSEEKPICSAKGCRADAVWVLAWNNPKLHTPERRKTWLACEEHREHLSQFLGVRGFLKDVVPLADWESDEA
>NZ_CP029195.1|WP_150507020.1|6272404_6273457_+|GTP-3',8-cyclase-MoaA
MSEGSRRLEPHADTRTGRGPTVLIDTFGRVATDLRVSLTDRCNLRCTYCMPEEGLQWLAKPDLLTDDEIVRLIRVAVTDLGVTEVRFTGGEPLLRPGLVGIVERCAALEPRPRMSLTTNGIGLKRTAAALKAAGLDRVNVSLDTLRPDVFKTLTRRDRHQDVLDGMAAARDAGLTPVKVNAVLMPGLNADEAPDLLGWAITEGYELRFIEQMPLDAQHGWKRDGMITAGDILDSLRTRFTLTPEGSQERGSAPAERWVVDGGPHTVGVIASVTRPFCRACDRTRLTADGQVRTCLFATEETDLRATLRSDASDAEVAEIWKKAMWGKKAGSGLDDPSFLQPDRPMSAIGG
>NZ_CP029195.1|WP_150507018.1|6270660_6272301_+|cation/acetate-symporter-ActP
MSTPVLLAAGNATSEHRPLIMALFGAFVLATLVITVWAGRQTRSAADFYAGGGQFTGFQNGLAISGDYMSAASFLGISGAIALYGYDGFLYSIGFLVAWLVALLLVAEPLRNSGRFTMGDVLAYRMRQRPVRTAAGTSTIVVSIFYLLAQMAGAGVLVSLLLGITSDGGKIGIVALVGVLMIVYVTIGGMKGTTWVQMVKAVLLIAGTLLITFLILLKFDFNLSQLLGAAATNSGKGDAFLEPGLKYGLSGVSKLDFISLGIALVLGTAGLPHILIRFYTVPTAKAARKSVNWAIGIIGAFYLMTIVLGFGAAALLSGDTIKASNKAGNTAAPLTALEVGGGADSTGGAILLAVISAVAFATILAVVAGLTLASSSSFAHDIYANVIKRGKATEKEEMRAARWSTVLIGIVSIALGALARDLNVAGLVALAFAVAASANLPTILYSLFWKRFTTTGALWSIYGGLISSVVLVLFSPVVSGGPASMFKGVDFHWFPLENPGLVSIPLGFLLGWLGSLLSKEEPDAGKYAELEVKSLTGVGVAAAVKH
>NZ_CP029195.1|WP_150159949.1|6270289_6270664_+|DUF485-domain-containing-protein
MATEAPPPPRDGTGSATAPASPTTEQFVEVQEGEEFGELRRTYRSFAFPLTLAFIAWYLLYVLLSNYAGGFMGTKVFGNINVALVLGLGQFATTFLIAWLYSRHAANRLDPKAEAIRERMEADA
>NZ_CP029195.1|WP_150507016.1|6268477_6270016_-|S8-family-serine-peptidase
MAHLGSRRGRALALPVGLALTASLGFLPSGAASAAELSDAPAATVATNGPKLSYVVNVAGGRWTAASVKKAIAAAGGEVVISYDQIGVIVVHSQNPEFAKTIRKARGVVSAGSTRTAPLSVQTDNSVGGGNQALTEAEAKAAAARATDEQDALEPLQWDLPAIKADKAHQRTLGSKRVTVGVIDTGVDDTHPDLAPNFDAKASANCVSGKPDTTAGSWRPNPGESDHGTHVAGTIAAAKNGIGITGVAPGVKVSGIKVSTPDGFFYTEAVVCGFVWAAEHGVDITNNSYYTDPWMFACKNDEDQKALIEAVTRATRYAERKGTVNVAAAGNSKFDLAADEILDNSSPNDTTPGDRVIDPKECLDYPAMLPGVVTVSATGAKDLKASYSNYGLGVIDIAAPGGDRTEYQTPDAPAVNGRILSTTVNGGYNYKAGTSMASPHAAGVLALIKSTHPYASPAALKALLYAQADKLACTNPYDIEGDGKIDAVCEGGKNKNGFYGAGLIDALDAVRR
>NZ_CP029195.1|WP_150507014.1|6267088_6268393_-|hypothetical-protein
MDNTVRTGTELLWSALGGDPALVDRVEYGGPGGLLPARLPVLDLARAAVAVAGLAAVERAGLPGPVRVDDGAVATAFVSERHLRVDGRAPVNFAPLSRFWRAADGWVRTHANYPHHRAALLAALGVPAGTVEAVAAAVAGRKAVDVETAVYAAGGLAVALRTPAQWAAHPQGREVAARPLLSRERLDEAPPRRRTGPLRVLDLTRVIAGPVATRTLALLGADVLRIDPPGNPELPDQHADTGVGKRTAALDLERPSDRRTFDELLDSADVLVTGYRPGALDRFGLHRPGLVTARLSAWGDYGPWGERRGFDSLVQVATGIGVTEGSPQEPGALPAQALDHGTGYLLAAAVLRSLTEQDREGGTRLVRLALAQTGHWLTHALPRYEPERYLTESDGPLGRLRHALSPVSYEGGPSSWSRPPGLAGADAPAWASPA
>NZ_CP029195.1|WP_150507012.1|6266035_6267079_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MRATTIHAPFDMRVEDVPDPVVQDPTDVVVRVLRACVCGSDLWAYRGESARQPGQRIGHEFLGIVEAAGSDVTGFTAGDLVVAPFVWSDGTCDYCAEGLQTSCPRGGFWGSVGSDGGQGEAVRVPFADGTLVKLPADAASDDRLLTALLALSDVMGTGHHAALGAGVRAGSTVAVVGDGAVGLCGVLAAKRLGAERIIALGRHTARTDIARRFGATDVVAERGEAAEAAVRELTGGQGAHAVIEAVGTEQSMRTAVAISRDGGSIGYVGVPHGSGTGLDLSVMFDRNIALRGGVAPVRAYIPELLPDVLDGTIDPSPVFDLTVGLEGVPGGYKAMDARTALKVLVKP
>NZ_CP029195.1|WP_150507030.1|6279298_6285646_+|hypothetical-protein
MHGWVNGVRSWLSALDEDALKSLLTWHQCLRGDRHAHTSDRPPRPTPPSRRELHTARVRLAKAQQGQLTSIAACGLVWAVKALHTEYGFSQRALTEPTLDELLAMLRVLDPPLARCALYGMLLPGSSRLPVGPLAREHEAALQAAADSGPPPDAHAIGPRFEAQEAPPEPPDDSRSFAPSGSGLPTTNPDCEDAASVPAPGPDPLVDLPASLARLTEDGARLAAVLRAAADAVEAGPLPADAPGEGLAAWTEGRARLAAALAAEGFVWEPDLGYADAGAGLARVREARAEQIDALRRKASRYAELLEWADDEEEAADLRRHLERIETQLRELDAPAGEAPAGRTEHGTGDATAMTGGGRVRVGASAIEAVRRAVEPPPPTPLLTHPTPPPQGAAPAQPSASARTAAPAQGAAATQGGGPAQASAPTPSTAPAEASAPAQSAAPAQAAAPAQAPAPTQGAVPTQGTELAQGAVPTQSTGLARGAAAARGGGSAPTSGSAHPSLPAQGAASTQAAPPTECAGPAQASAPTQSSTPARGAAPAQSAASTQASAAAQTAAPAQPNPPAQKPASAPPPAPAPAQPAPPGQASASDRASTPPQPAGTARASVPAQGAAPAPVTAPAQGHPQPAVEEEPWPVGVPAPDWDPYAPWDTGSEPPVGRLLRDGRLAEAYWMTVASRESDVRARTLAFATAAFGCVSDSEATPVQMAHEFDPALAAQDREAHLVALAAALRTGLTARWPHGLISGFVMPSGLTGPWQQLLTVLVAAVRDGRAFEPGMLQGSAEGLEAATREEIGLTARQLLDDLPRRKMKYQRASQVLQYLVGPSGPVREALNEVIEWSAQSPAQYTGTPGFRALGEQLWRAEDIDRLIEDTDALFRTSKQAKEPITAGALRQLHTACRSVGELLMRAEAAHAAARPHQGVSERGIPELASVLRHLAEEPAPAGTGGAALGLLRAWLTGEQARSADTAADQLRENGGPVPPSDALLRLPDLPRDALGDPDLADPRAARRIAALLTPADAEYALARYLDDGDLHLARALIAAVESEPEEYGCTDPEWGETAARRLAQGHEDWRRAVAERHRAAAGLLAQMRTLNQLAADEEREFVGRLQEFADGEESGRYRFAVESLRALEAELVTLVENYTRQLRENLAQLRSRPDRPLSAADHDRIARLIDEGDTVTAQEFLALATSHKPLPERPADDGSELVAFLAGVTAADAPKAGGEGIDADWWAKRYGDPDASLTPAAGNGLESWAALCTPQGRRGEWQQHIPRVLRLLGLELSTHQVTAERVALGQGMRRFKVRARVAERAGYVAALGSRASSYTVLLIWEEQPADGPLAHLEDADVGANIVLYLHPLGMEGRRGLAESARSFAQQALVVDSAVMGWMAARAPGSFRSLQRVTLPWAAYNPYTPFVAGLVPPEVFYGRDEEMREVMGREGGMFLYGGRQLGKSALLRRVAEIFPSRADAHVAVYLDLLKAEIGHAEAPDRIWSRLVEDLKRKGVFGNKMSEQANPDVVVRNIQSWLDEDDTRRILVLADEADAFLNTDSRRAYRVGSESTFPNVMHFQRLMEQTERRFKIVFAGLHQVQRFGHLSNVSTVHGGPDVLVGPLGTQAAVRLVTEPMAALGYFFERPELVWRILAITNYQANLVQIFCRELVRVLHDRPYTWSGNPVRITEDDVQKVAASETVRRQIAERLRFTINLEDRYRVLALVIALRSLKDNYRGDYSASELLQEAREAWPEGFEMLSAKQAQIFLTEMVGLGLLIQLGDRSRFAVRSPNVVNMLGTREELELELRETEFGLPYDYNPHAARRILGRDARHVQTYSPLTEEQLHETAQSGVSLIGATALHRPELVRRAVAAFAENRGVDVVPYTHGDDLAALLKSRRRKAHVIIADLRGADTDALRETVRALLVHAGPAADRLVRQTERRSGGNENRSVVVVADPAGLAELAADDGHEELSVRWLRPERWTADALRAWSECPFVSREDRDRLVAATGGWPRWMEAAVTDVSVHGATLDNAVERIRTLIAGSRNIAEHLHLSGLDARDLDLLAAWTGYVEEGQGVPRDDVSAAVELSDADTDAWLQHLGRLGVLDETPEGFAVEPVTYRAVRSRAAAGEK
>NZ_CP029195.1|WP_041662209.1|6287754_6288474_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MSRSVLVTGGNRGIGLAIARAFAEAGDKVAITYRSGEPPAALTELGCLAVKCDITDGEQVEQAYKEIEEKHGPVEVLVANAGVTKDQLLMRMSEEDFTSVLDTNLTGTFRVVKRANRGMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTAVLTDDQRAGIVSQVPLGRYAQPEEIAATVKFLASDDASYITGAVIPVDGGLGMGH
>NZ_CP029195.1|WP_071891204.1|6288477_6289254_+|enoyl-ACP-reductase-FabI
MAGILEGKKILITGVLMESSIAFHAAKLAQEQGAEIILTAWPRPTLTERIARKLPQPEKVKVLELDVSNDEHLARLEGQVREHLGDRLDGIVHSIGFAPQDALGGNFLNTPFESVATAMHVSAFSLKSLTMALLPLMSEGGSVVGLTFDAKFAWPQYDWMGPAKAALEATSRYMARDLGKQNIRCNLISAGPLGSMAAKSIPGFGELASVWDSRSPLEWELSDPEPAGRGIVALLSDWFPKTTGEIIHVDGGLHAIGA
>NZ_CP029195.1|WP_150159942.1|6289415_6289826_+|hypothetical-protein
MRAIRHGFGAFASVAVLLTGIAVAAEVRAAPAPAEEVPVAGPATEEPENFGASCRTEVQGSRVTAHCQNPYPRTDRIRLHVECERWWDVDSDSAPVDVGPADYGKVTGRCWKEVRSAWITHQPADQAPEPAVPRGS
>NZ_CP029195.1|WP_150507032.1|6289770_6290484_-|FCD-domain-containing-protein
MALGHPRRAGLSDQVIAELRNQITSGEWPVGSRIPTEPELVEQLGVARNTVREAVRALAHNGLLDIRQGSGTYVIATSELAGVMHRRFAGSDPRHVAELRSTLESAAARFAAGRRTERDLKQLDALLLRREEAWESGDAERFVTADATFHHAVVAASGNEVLTELYADLGDLLRDWLRGDVGQELRPENWMDHARLVDAIREGDAERAGAEAAGYPFMCLRSPAAQPAREPGPPAGG
>NZ_CP029195.1|WP_150507034.1|6290547_6291948_+|CynX/NimT-family-MFS-transporter
MPDEPKTLDPAVRPTRISAPAVTTTPPGAAATAGDSPAPGPARRLTLGLVTVGLVLAALNLRPAITSLGALLEEVSSDLHMSGTVAGVLTSVPPLCFAVFGITAPRLARRFGPAAVVCAGMAAIFAGLLLRPFAGGTAGFLAASALALMGIAVSNVLMPVIVKRYFPERIGSMTGLYSMALALGTSVAAAATVPMTDALGGDWRVGLGVWAAIAALAVLPWIPLVRDRDRTATAPAGPQAEATATSRAAAGATVPPGAPGATAAAGTGATTAAAPRITRSRTAWALGVFFGLQATGAYITMGWMPQIFRDAGVPASTAGVLLAVTMVMGVPLAFVIPRLATRMKNQGPIVVALGLCGLTGYTGLFLAPSAGAWVWAVLLGISNCSFPLALTMIGMRSRTGAGVVRLSAFAQSVGYLISIPGPLLVGVLYQHSGGWGLPIVLMGGLMIPQMIVGTLAGRDRTVEDEC
>NZ_CP029195.1|WP_041663706.1|6292238_6292442_+|hypothetical-protein
MTARTYTRVRPGATGVDTRLPWWALVLPAAAFVALLLLMAGPAEAHAPSGDAGAGRVLERIQQTLSL
>NZ_CP029195.1|WP_150507036.1|6292477_6292996_+|histidine-phosphatase-family-protein
MSVDTPRRIVLLRHAKADWNQESDHERPLAERGRKDAPVAGRRLAETGIAFDLALCSTATRTRETWKLAVPELPQRPRTVYEERLYEASLGELIALLNETSEDVANLVVIGHNPGMHALADALAGEAEGDLPARMNRSGFPTSAFAVLTFTGTWKSVEHGVGRLVDFWTPHA
>NZ_CP029195.1|WP_150507038.1|6293099_6294317_-|phosphoserine-phosphatase-SerB
MSASQTSDVPTLLVKIFGKDRPGITAGLFDTLAAYSVDVVDIEQVVSRGRLVLCALVTEPTVASQGELRATVHSWAESLKLQAEIISGTGDNRPRGEGRSHVTVLGNPLTAEQTAAIAARIAGAGGNIDRVFRLAKYPVTAVEFAVSGCETEPLRTALATEAHSVGVDVAVVSAGLHRRAQRLVVMDVDSTLIQDEVIELFAAHAGCEDKVAEVTAAAMRGELDFEQSLHARVALLAGLDASVVDKVRTEVRMTPGARTLIRTLKRLGYQVGVVSGGFTQVTDDLKERLGLDFASANTLEIVDGKLTGRVTGEIVDRAGKARLLRRFAAEAGVPLAQTVAIGDGANDLDMLNAAGLGVAFNAKPVVREAAHTAVNVPFLDTVLYLLGITREEVEAADGGEEDLLH
>NZ_CP029195.1|WP_015032646.1|6294538_6297157_+|FHA-domain-containing-protein
MGHGVPELVLELNGRTWTLDPSRSYTLGRDPQGDLVIDDARVSWRHATISWGGRSWVIEDHGSTNGTFLLGQRIHQVEIGPGSAVHLGNATDGPRLNLAAAGAPQQQAPHQQAPHQHAPAHAQQAPAHQASAAAQADWATHQAPPQQNWQQQAPPQVPHQQVPQGPAGHQGPVGHPGQGGPVEQLAQKVPATGGAGSASSAYADRSPTTFHQLALGHVMRIGRALENELVVSDLQVSRHHAEFHATPDGRFEIRDLGSHNGTYVNGQPITKGGTALLGPQDIVGVGHSTFRIVGGQLEEFVDTGSVSFSARHLTVTVDGGKQILKDVSFGVPEKSLIGVIGPSGSGKSTLLKALTGYRPANEGDVLYDNRSLYKQFAELRQRIGLVPQDDILHKELTVQKALRYAAKLRFPGDTAESEREARIGEVLRELKLDIHKEKKVTSLSGGQRKRVSVALELLTKPSLIFLDEPTSGLDPGMDRDVMQLLRGLADDGRTVLVVTHSVAELGLCDKLLVMAPGGSVAYFGPPDEALNFFGYSTWADVFSAFENYRDYDWAGRWKGSQHYQLYAADIDAVAAQPVQMPQQAMSRPPKPQGWGSQLWTLIRRYVSVIASDVGFMALMVILPAVLGAVSVVIPADFGLGKPTPPSRFNGDAGTIMLILAVGMCFSGAANSVRELIKERVIYERERAVGLSRSAYLMSKVIVLGVITALQGVIICAIGFSTRALPEEGLLMPPAVELCIQVIGLGLTSMMVGLVISALVKTAEKTMPLLVMFAIIQVVFTGILFQVYDSPGLEQFAWLMPSRWGIAGAGATLDLAHLMPPWDQKNPANTDPLWEHTVGQWSLNLGIQLFMAAICCVAVARLLRRHEPEVMRK

Crispr_ID: NZ_CP029195_12

• CRISPR_ID: NZ_CP029195_12
• CRISPR_location: 6313695-6314150
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 9 spacers

Consensus repeat of NZ_CP029195_12

Consensus_repeat	Method
CNNCCGCCGNGACGACNN	CRT

spacers of NZ_CP029195_12

>12.1|6313713|42|NZ_CP029195|CRT
CCGTCGCGATGACAACCGTGGTGGTGGCGGCTTCCGTCGCGA
>12.2|6313773|33|NZ_CP029195|CRT
CCGTGGTGGCGACCGCGGCGGGTTCCGTCGGGA
>12.3|6313824|42|NZ_CP029195|CRT
CCGTGGCGGTGACAACCGCGGTGGCGACAACCGCGGTGGCGG
>12.4|6313884|18|NZ_CP029195|CRT
CCGCGGTGGTGGCGGTGG
>12.5|6313920|27|NZ_CP029195|CRT
TGGTGGCGACAACCGCGGTGGCGGCGG
>12.6|6313965|36|NZ_CP029195|CRT
TGGCGGCGACAACCGTGGCGGCGGGTTCCGCCGCGA
>12.7|6314019|33|NZ_CP029195|CRT
TCCGTCGTCCTTCCGCCGTGACGACCGGCCCTC
>12.8|6314070|24|NZ_CP029195|CRT
TGGTGGCGACAACCGCGGTGGCGG
>12.9|6314112|21|NZ_CP029195|CRT
GCGTGACGAGCGTCCCTCGTC

CRISPR arrays and Neighbor proteins around NZ_CP029195_12

CRISPR arrays

The CRISPR arrays of NZ_CP029195_12

>merge|NZ_CP029195|12|6313695-6314150|CRT
CAACCGCGGCGGTGGCTTCCGTCGCGATGACAACCGTGGTGGTGGCGGCTTCCGTCGCGACGACCGCGGCGGTGACAGCCGTGGTGGCGACCGCGGCGGGTTCCGTCGGGACGACCGCCGCGACGACAACCGTGGCGGTGACAACCGCGGTGGCGACAACCGCGGTGGCGGCTTCCGCCGTGACGACAACCGCGGTGGTGGCGGTGGTTTCCGTCGCGACGACCGTGGTGGCGACAACCGCGGTGGCGGCGGCTTCCGTCGCGACGACCGTGGCGGCGACAACCGTGGCGGCGGGTTCCGCCGCGACGACCGCCGTGACGAGCGTCCGTCGTCCTTCCGCCGTGACGACCGGCCCTCCTTCCCGCGTGACGACCGTGGTGGCGACAACCGCGGTGGCGGCTTCCGCCGTGACGACCGGCGTGACGAGCGTCCCTCGTCGTTCCGCCGTGACGACAA

>NZ_CP029195|12|1|6313695-6314150|CRT
CAACCGCGGCGGTGGCTT	CCGTCGCGATGACAACCGTGGTGGTGGCGGCTTCCGTCGCGA
CGACCGCGGCGGTGACAG	CCGTGGTGGCGACCGCGGCGGGTTCCGTCGGGA
CGACCGCCGCGACGACAA	CCGTGGCGGTGACAACCGCGGTGGCGACAACCGCGGTGGCGG
CTTCCGCCGTGACGACAA	CCGCGGTGGTGGCGGTGG
TTTCCGTCGCGACGACCG	TGGTGGCGACAACCGCGGTGGCGGCGG
CTTCCGTCGCGACGACCG	TGGCGGCGACAACCGTGGCGGCGGGTTCCGCCGCGA
CGACCGCCGTGACGAGCG	TCCGTCGTCCTTCCGCCGTGACGACCGGCCCTC
CTTCCCGCGTGACGACCG	TGGTGGCGACAACCGCGGTGGCGG
CTTCCGCCGTGACGACCG	GCGTGACGAGCGTCCCTCGTC
GTTCCGCCGTGACGACAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150159926.1|6319124_6319472_-|sterol-binding-protein	unknown	unknown	gnl|CDD|379708
NZ_CP029195.1|WP_150507061.1|6319807_6320623_+|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|224110
NZ_CP029195.1|WP_150507063.1|6321688_6323431_+|DNA-repair-protein-RecN	unknown	unknown	gnl|CDD|223571
NZ_CP029195.1|WP_015032624.1|6320619_6321543_+|NAD-kinase	unknown	unknown	gnl|CDD|235121
NZ_CP029195.1|WP_150507047.1|6304131_6304899_+|TSUP-family-transporter	unknown	unknown	gnl|CDD|376667
NZ_CP029195.1|WP_150508449.1|6314943_6315693_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|371058
NZ_CP029195.1|WP_150159933.1|6305636_6306176_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl|CDD|176643
NZ_CP029195.1|WP_015032636.1|6304962_6305469_-|HNH-endonuclease	unknown	unknown	gnl|CDD|224321
NZ_CP029195.1|WP_150507053.1|6315760_6317053_-|DUF1015-family-protein	unknown	unknown	gnl|CDD|377633
NZ_CP029195.1|WP_150507051.1|6307895_6308195_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507045.1|6303094_6304033_+|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl|CDD|223407
NZ_CP029195.1|WP_150507059.1|6319515_6319800_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507049.1|6307099_6307762_+|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl|CDD|234840
NZ_CP029195.1|WP_150507042.1|6300752_6301544_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015032640.1|6301700_6302498_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224044
NZ_CP029195.1|WP_150507057.1|6318276_6319119_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224045
NZ_CP029195.1|WP_150507055.1|6317132_6318224_+|HAD-hydrolase-like-protein	unknown	unknown	gnl|CDD|319832
NZ_CP029195.1|WP_041662208.1|6302572_6303001_+|NfeD-family-protein	unknown	unknown	gnl|CDD|376684
NZ_CP029195.1|WP_150507065.1|6323427_6324261_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015032634.1|6306229_6307012_-|sporulation-protein	unknown	unknown	gnl|CDD|369195

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150507061.1|6319807_6320623_+|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase	gnl|CDD|224110	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].	1.00954e-102
NZ_CP029195.1|WP_150507063.1|6321688_6323431_+|DNA-repair-protein-RecN	gnl|CDD|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_CP029195.1|WP_015032624.1|6320619_6321543_+|NAD-kinase	gnl|CDD|235121	PRK03372, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	8.22742e-167
NZ_CP029195.1|WP_150159926.1|6319124_6319472_-|sterol-binding-protein	gnl|CDD|379708	pfam14864, Alkyl_sulf_C, Alkyl sulfatase C-terminal. This domain is found at the C-terminus of alkyl sulfatases. Together with the N-terminal catalytic domain, this domain forms a hydrophobic chute and may recruit hydrophobic substrates.	6.96579e-05
NZ_CP029195.1|WP_150508449.1|6314943_6315693_+|tetratricopeptide-repeat-protein	gnl|CDD|371058	pfam10446, DUF2457, Protein of unknown function (DUF2457). This is a family of uncharacterized proteins.	0.000175454
NZ_CP029195.1|WP_150159933.1|6305636_6306176_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl|CDD|176643	cd00865, PEBP_bact_arch, PhosphatidylEthanolamine-Binding Protein (PEBP) domain present in bacteria and archaea. PhosphatidylEthanolamine-Binding Proteins (PEBPs) are represented in all three major phylogenetic divisions (eukaryotes, bacteria, archaea). The members in this subgroup are present in bacterial and archaea. Members here include Escherichia coli YBHB and YBCL which are thought to regulate protein phosphorylation as well as Sulfolobus solfataricus SsCEI which inhibits serine proteases alpha-chymotrypsin and elastase. Although their overall structures are similar, the members of the PEBP family have very different substrates and oligomerization states (monomer/dimer/tetramer). In a few of the bacterial members present here the dimerization interface is proposed to form the ligand binding site, unlike in other PEBP members.	2.51625e-58
NZ_CP029195.1|WP_015032636.1|6304962_6305469_-|HNH-endonuclease	gnl|CDD|224321	COG1403, McrA, Restriction endonuclease [Defense mechanisms].	5.858e-18
NZ_CP029195.1|WP_150507047.1|6304131_6304899_+|TSUP-family-transporter	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.35161e-23
NZ_CP029195.1|WP_150507045.1|6303094_6304033_+|SPFH/Band-7/PHB-domain-protein	gnl|CDD|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	4.36774e-67
NZ_CP029195.1|WP_150507053.1|6315760_6317053_-|DUF1015-family-protein	gnl|CDD|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	2.5261e-124
NZ_CP029195.1|WP_015032640.1|6301700_6302498_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	7.52999e-92
NZ_CP029195.1|WP_150507057.1|6318276_6319119_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.49184e-135
NZ_CP029195.1|WP_015032634.1|6306229_6307012_-|sporulation-protein	gnl|CDD|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	9.81943e-108
NZ_CP029195.1|WP_041662208.1|6302572_6303001_+|NfeD-family-protein	gnl|CDD|376684	pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like proteins are widely distributed throughout prokaryotes and are frequently associated with genes encoding stomatin-like proteins (slipins). There appear to be three major groups: an ancestral group with only an N-terminal serine protease domain and this C-terminal beta sheet-rich domain which is structurally very similar to the OB-fold domain, associated with its neighboring slipin cluster; a second major group with an additional middle, membrane-spanning domain, associated in some species with eoslipin and in others with yqfA; a final 'artificial' group which unites truncated forms lacking the protease region and associated with their ancestral gene partner, either yqfA or eoslipin. This NefD, C-terminal, domain appears to be the major one for relating to the associated protein. NfeD homologs are clearly reliant on their conserved gene neighbor which is assumed to be necessary for function, either through direct physical interaction or by functioning in the same pathway, possibly involve with lipid-rafts.	5.81456e-16
NZ_CP029195.1|WP_150507049.1|6307099_6307762_+|DNA-3-methyladenine-glycosylase	gnl|CDD|234840	PRK00802, PRK00802, DNA-3-methyladenine glycosylase.	2.6938e-89
NZ_CP029195.1|WP_150507055.1|6317132_6318224_+|HAD-hydrolase-like-protein	gnl|CDD|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.06609e-90

Protein sequences

>NZ_CP029195.1|WP_150507051.1|6307895_6308195_-|hypothetical-protein
MYVAYPPQGPAGLSKEPRHPKMDGVSTNLALIFGTLLSSQGTDASFVLTLSGFPPGFSLRVSNLTRSFSVPFPVRSLYPVACWLPFASRRGHYFSRILR
>NZ_CP029195.1|WP_150507049.1|6307099_6307762_+|DNA-3-methyladenine-glycosylase
MSESPDRTPLPRAFFDRPVLEVAPDLLGRTLVRRSPEGVMELRLTEVEAYAGAIDPGSHAFRGRTARNAVMFGPPGHAYVYFTYGMWHCLNLVCGPEGKASGVLLRAGEILKGAEQARPRRRSARRDHELAKGPARLATALDIALSLNGTDTCDGPDSPLAVLTGTPPCARNIRSGPRTGVGGEGAPHPWRFWIDEDPTVSPYRPHTPRKRPLDSNRPTA
>NZ_CP029195.1|WP_015032634.1|6306229_6307012_-|sporulation-protein
MGFKKLLASLGAGGASVETVLTEENVVPGGVVQGEVRIQGGSVDQQIEGLSVGLQARVEVEGGDQEHKQDIEFVKVRLGGAFEVKAGAVHVVPFGLEIPWETPVTSVSGQQLRGMHIGVTTELEIARAVDSGDLDPVNVHPLPAQQAILDAFLQLGFRFKSADMERGHIRGTRQKLPFYQEIEFFAPQQYRGLNQVEVSFVADDREMDVVLEMDKKPGLFGEGSDSFRAFKVGLHDFHTTDWAAYLNQWLAEVGGRRNWL
>NZ_CP029195.1|WP_150159933.1|6305636_6306176_-|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MSEGKRAPLPHDFHPPVAAFTVVSDDIAPGGVLKDAQVYAAGNTSPQLRWEGFPAGTKSFAVTCFDPDAPTGSGFWHWVLFDIPASVTELPAGAGSGSFEGLPAGAVHVRNDYGSKDFGGAAPPAGDPAHRYVFTVYAVDSEKLGPDSDASPAAIGFNLRFHTLGRAQLIGEYAAPAAG
>NZ_CP029195.1|WP_015032636.1|6304962_6305469_-|HNH-endonuclease
MRDTLVLNASFEPLSTVTLNRAVVLVLTDKAVVEHAHPDLRVRGAAVDLPVPRVIRLCRYVRVPFRRQAPWSRRGVLVRDQHRCAYCGRRATTVDHVVPRAQGGGDTWLNTVASCAEDNHRKADRTPEQAGMPLLHQPFEPTPADAMLLAMRASERSELPEWLARAAA
>NZ_CP029195.1|WP_150507047.1|6304131_6304899_+|TSUP-family-transporter
MSIWEALAVLAAGIGAGTINTIVGSGTLITFPVLLATGLPPITANVSNALGLVPGSISGAIGYRAELKGQKRRILRLGGAALLGGLIGAILLLALPSDAFDAIVPILIGLALVLVLLQPRIAAAVKRRREQTGTEAHPDGGPVLLGGLFLASMYGGYFGAAQGVLYLSLMGLLLHDNLQRINAVKNILGALVNGVAAVFFLFVADFDWTAVLLIAVGSTIGGQIGAKVGRRLPPTVLRGVIIAVGVVAILQLTLR
>NZ_CP029195.1|WP_150507045.1|6303094_6304033_+|SPFH/Band-7/PHB-domain-protein
MSAVIIVLIILVVLVFIALIKTIQVIPQASAAIVERFGRYTRTLNAGLNIVVPFIDSIRNRIDLREQVVPFPPQPVITQDNLVVNIDTVIYYQVTDARAATYEVASYIQAIEQLTVTTLRNIIGGMDLERTLTSREEINAALRGVLDEATGKWGIRVNRVELKAIEPPTSIQDSMEKQMRAERDKRAAILTAEGTRQSAILTAEGEKQSAILRAEGESKAAALRAEGEAQAVRTVFEAIHAGDPDQKLLSYQYLQMLPKIAEGDANKLWIVPSEIGDALKGLSGAFGNKDGSVPGFNTKATGTERRDEPPVD
>NZ_CP029195.1|WP_041662208.1|6302572_6303001_+|NfeD-family-protein
MDIDAWVWWLIGAVGLGIPLVLTAMPEFGMFSVGAVAGAVTAALGFGVVPQVLVFVVVSVALIAVVRPIATRHRDDRPRHATGIDALKGRQAVVLERVDVHGGRIKLAGEIWSARTLDTGQSFEPGEQVDVVDIDGATAVVM
>NZ_CP029195.1|WP_015032640.1|6301700_6302498_+|ABC-transporter-ATP-binding-protein
MSDVLELVDVSVVRDGRALVDEVSWSVKEGERWVILGPNGAGKTTLLNIASSYLFPTKGTAHILGERLGGVGTDVFELRPRIGMAGIAMAEKLPKRQTVLQTVLTAAYGMTATWHEDYDPVDEQRAKAFLDRLGMNDYLDRKFGTLSEGERKRTLIARAMMTDPELLLLDEPAAGLDLGGREDLVRRLGRLARDPYAPSMIMVTHHVEEIAPGFTHVLMIRQGKVLAAGPVEMELTSRNLSHCFGLPLVVERVGDRWTAHGLPLK
>NZ_CP029195.1|WP_150507042.1|6300752_6301544_-|hypothetical-protein
MLSEPRSGRLAAWGNALLAGAVSPDEAALAIVGEDAVHRVEGLPGEARPVGLTLALGRLRRLGVTGWRVALPAPGHPLGLSGPPDFNARALEAEEAAVGFGAPYGLVPEVSEAGPSGDVHVEVVWRCLAVREAPPADVPSLGEAERELAEALRDATAVLTRLDVAASGPAADAAREAYRARAEVGREVLAPGYPPRAVRVLELAQRIGLLVDLAYDHGHGGAVSAAEMAARGEALRPVERVARRAQVAAYNAYVEERERERGF
>NZ_CP029195.1|WP_150508449.1|6314943_6315693_+|tetratricopeptide-repeat-protein
MSLPKGLAEDVSRNLVMVAQLIDEDPEKAYGYSRVALRLASRVAAVREAAGFAAYATQKYSEALAEFRAARRMSGGVELWPVMADCERGLGRPERALAMAGEPEVQKLDKAGQVEMRLVAAGARRDMDQLDAAIVTLQSPELASSAVHPWTARLRYAYADALLAAGREREAREWFAKALEADKDGATDASDRLAEMDGVEFVDAFVEDEADEDESGLVVEGDLDDDLDEDDEDDEDEDDDLGRGDGDKS
>NZ_CP029195.1|WP_150507053.1|6315760_6317053_-|DUF1015-family-protein
MNTSGHAATDVRDDTVGLRLTPFRGLRYVPERVGSLAAVTSPPYDVVVRPDGLLHLESADPHNIVRLILPQAITAGTRHRKAAVTLDRWLADGVLAPDPEPALYVYEQHGDGILQRGIIGALELTTPAEGVVLPHEDVMPHVVEDRAALMRTTAANLEPLLLTYVGDGDGAGRVVERTVERPPLLATTTEDGFHHRLWAVTDPAEQAAVTAELGRHQALIADGHHRWATYLRLREEHPSPGPWNYGLVLLIDTARYPLRVRAIHRLLNRLPLADALTALDGSFRVRRIERPLPAALDALAEATAEGNAFLLAGDGGFHLVDRPDPALLDRTIRTDRPDAWRTLDATVLHSTLLEHVWQIPDAPEDISYIHDTEAAVAQAERRGGTAVLMHPVREDVVRDLARQGVTMPRKSTSFGPKPATGLVLRSLALD
>NZ_CP029195.1|WP_150507055.1|6317132_6318224_+|HAD-hydrolase-like-protein
MTVRNGQGRRGVGRTRPGGSAVPLSEAYDTALLDLDGVVYAGGEAVPHAVEALGAARAGGMHLAYVTNNALRTPDAVAEHLTELGVPAEAGDVITSAQAVARLIADDVPPGSRVLVIGGEGLRVALRERGLVPVDSAEDGPVAVVQGYGGPEMPWGRFAEASYAVARGLPWYASNTDLTIPGARGIGPGNGAAVEVVRIATGGRMEPKVAGKPLPPMHRETVLRTGAKRPLVVGDRLDTDIEGAFNGGVDSLLVFTGVTDAAQLLAAVPEHRPTYVAADLRGLLVGQPEVVAGEDGVFVCGAWRASVSAPDGGELVLEGPAGDAAGADPMDGVRALCGAAWSAADAAGGAVPDAGKVLARLGF
>NZ_CP029195.1|WP_150507057.1|6318276_6319119_+|ATP-binding-cassette-domain-containing-protein
MDGRQQRLSAESVTLAYEQRVIARDLSVEIPDNSFTVIVGPNACGKSTLLRALSRMLKPSQGRVLLDGQSIHALPARKVAKTLGLLPQTSVAPDGITVADLVARGRYPHQGLLRQWSPEDERITRESMAATGVAELAERYVDELSGGQRQRVWIAMALAQQTPLLLLDEPTTYLDIQHQIDVLDLCAELHETQGRTLVAVLHDLNHAARYATHLIAVRDGEVVAEGPPAEVVTAELVERVFGLRCQVIEDPETGTPLVVPAGRKARVPRPAASPEPALRR
>NZ_CP029195.1|WP_150159926.1|6319124_6319472_-|sterol-binding-protein
MATITECRDALDRLSDNLARADGDVRGAAALDRTLSCHITDLDSTFTGRLAGGRIEVESLVAGPPPAKAQIRLAMTGDDLVAMVGGELNFAKAWASGRVRLEAGFRDLLRLRSLL
>NZ_CP029195.1|WP_150507059.1|6319515_6319800_+|hypothetical-protein
MNDVMPEPVDATPEAEAEAPGDGADEPAAAAPLGVVRELTGHPGVDVHLARLDEVDHLPADGHLEVYEDVHRGLRAELTSLDAHPAPRPHDNRS
>NZ_CP029195.1|WP_150507061.1|6319807_6320623_+|TlyA-family-rRNA-(cytidine-2'-O)-methyltransferase
MAGVARRRLDAELVRRKLARSREHASQLIAAGRVTVGKTVATKPATQVETAAAIVVVQDDSDPDYVSRGGHKLAGAFDAFVPLGLKVEGRRALDAGASTGGFTDVLLRAGAAHVVAVDVGYGQLAWSLQSDERVTVKDRTNVRELTLDAIDGVPVDLVVGDLSFIPLGLVLPALAACTAPDADLVLMVKPQFEVGKERLGTGGVVRSTELRADAVKNVARRAAELGLGVLGVTASPLPGPSGNVEYFLWLRAGAPALDPADVDRAVAEGPR
>NZ_CP029195.1|WP_015032624.1|6320619_6321543_+|NAD-kinase
MSSTAAAPETAPRTVFLLAHTGRPAAVRSAELVVLGLLRCGIGVRVLEAEAEDLPLPPAVERVKEACSDALDGCELLVVLGGDGTLLRGAEFSRASGVPMLGVNLGRVGFLAEAERDDLDKVVDRVVTKAYEVEERMTLDVVVYENGDVLHRDWALNEAAVQKVSPERMLEVVLAIDGRPVTGFGCDGVICATPTGSTAYAFSAGGPVVWPEVEALLMVPIGAHALFAKPLITTPESVLAVEVEPHTPHGVLWCDGRRTVELPAGARVEVRRGAVPVRLARLHHASFTDRLVAKFALPVSGWRGGAR
>NZ_CP029195.1|WP_150507063.1|6321688_6323431_+|DNA-repair-protein-RecN
MVWGVLEEMRIRSLGVIDDAVVELSPGFTAVTGETGAGKTMVVTSLGLLLGGRADPALVRIGAASAVVEGRISVPAGAPAALRAEEAGAELDDGVLLVSRTVSAEGRSRAHLGGRSVPVGLLGELADELVAVHGQTDQQGLLKPARQRGALDRYAGEAVSVPLAAYAEAYRRLRAVSGELDEITTRARERAQEADLLRFGLGEIEAVAPRAGEDTELAAEAERLGHAEALASAAALAHAALAGVPEDPESVDATTLVAGAGRALESVRSHDPALAALADRMGEISILLGDVATELAGYADDLDADPLRLAAVEERRAALTQLTRKYGEDIASVLAWAEESAGRLGELDGDDDRVEELTAERDRLRDELSVLAQRLTDARTEAADRFADAVTAELASLAMPHARVSFDIRQTEDPDGVEVGGRRVAYGPSGADEVELLLAPHPGAPPRPIAKGASGGELSRVMLAVEVVFAGVDPVPTYLFDEVDAGVGGKAAVEIGRRLAKLARTAQVVVVTHLPQVAAFADRQLLVEKTNDGSVTRSGVTVLEGEERVRELSRMLAGQEDSETARAHAEELLATARADG
>NZ_CP029195.1|WP_150507065.1|6323427_6324261_+|hypothetical-protein
MRGRLVSFGVAAVVSRAVYGALRGRVAGEGVSPAAGGSGSAVGRESVSPVDPGSVSPVDRGSVSGGPWTRVNHGGRVVDLCAGPAVALGAAVGAGSGPVAFAVLAAGACGAYDDVKGDSRRGFRAHLTALRDGEVTSGAVKLFGIGAASLVAGALLKERAVDKVLAGVVIAGTAHLVNLVDVRPGRAGLAVLALGAPGLPRGASAAAPMGAVTAVLGDDLGERTMLGDTGAHALGAAVGCAIAAGNGRLGLAVHAAGLIAAAAWGERETASRAHPSG

Crispr_ID: NZ_CP029195_13

• CRISPR_ID: NZ_CP029195_13
• CRISPR_location: 6562011-6562104
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_13

Consensus_repeat	Method
GCCCAGCCCTGGGCTCCGCCGGCCTCGGCGGGCC	CRISPRCasFinder

spacers of NZ_CP029195_13

>13.1|6562045|26|NZ_CP029195|CRISPRCasFinder
ACGCGGCGGGACCGCCCCGCCCCGAT

CRISPR arrays and Neighbor proteins around NZ_CP029195_13

CRISPR arrays

The CRISPR arrays of NZ_CP029195_13

>merge|NZ_CP029195|13|6562011-6562104|CRISPRCasFinder
GCCCAGCCCTGGGCTCCGCCGGCCTCGGCGGGCCACGCGGCGGGACCGCCCCGCCCCGATGCCCAGCCCTGGGCGCCGCCGGCCTCGGCGGGCC

>NZ_CP029195|13|12|6562011-6562104|CRISPRCasFinder
GCCCAGCCCTGGGCTCCGCCGGCCTCGGCGGGCC	ACGCGGCGGGACCGCCCCGCCCCGAT
GCCCAGCCCTGGGCGCCGCCGGCCTCGGCGGGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_015032412.1|6552721_6554155_-|ethanolamine-permease	unknown	unknown	gnl|CDD|129986
NZ_CP029195.1|WP_150507312.1|6568311_6569508_+|PAS-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_CP029195.1|WP_150507310.1|6562945_6564112_+|type-VII-secretion-associated-serine-protease-mycosin	unknown	unknown	gnl|CDD|274856
NZ_CP029195.1|WP_150507305.1|6550301_6551756_+|nitrate-reductase	unknown	unknown	gnl|CDD|224374
NZ_CP029195.1|WP_015032395.1|6569663_6570791_+|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl|CDD|234780
NZ_CP029195.1|WP_150508462.1|6556461_6557856_+|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|365919
NZ_CP029195.1|WP_078508611.1|6565680_6566403_+|translation-initiation-factor-IF-3	unknown	unknown	gnl|CDD|234582
NZ_CP029195.1|WP_150507304.1|6549581_6550232_-|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|184958
NZ_CP029195.1|WP_015032399.1|6566526_6566721_+|50S-ribosomal-protein-L35	unknown	unknown	gnl|CDD|234676
NZ_CP029195.1|WP_015032398.1|6566827_6567214_+|50S-ribosomal-protein-L20	unknown	unknown	gnl|CDD|179959
NZ_CP029195.1|WP_015032397.1|6567391_6568231_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|223640
NZ_CP029195.1|WP_150507306.1|6551977_6552685_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl|CDD|336781
NZ_CP029195.1|WP_150159802.1|6554273_6555002_-|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|225097
NZ_CP029195.1|WP_150507307.1|6557861_6558647_+|3-oxoacyl-ACP-reductase	unknown	unknown	gnl|CDD|180371
NZ_CP029195.1|WP_150507309.1|6562106_6562949_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507308.1|6558751_6560032_+|haloacid-dehalogenase-like-hydrolase	unknown	unknown	gnl|CDD|319796
NZ_CP029195.1|WP_150159798.1|6565007_6565394_-|DUF1844-domain-containing-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015032410.1|6555091_6556462_+|glutamine-synthetase	unknown	unknown	gnl|CDD|223252
NZ_CP029195.1|WP_150159800.1|6560095_6561298_-|amino-acid-deaminase/aldolase	unknown	unknown	gnl|CDD|143488
NZ_CP029195.1|WP_150507311.1|6564158_6564890_+|SseB-family-protein	unknown	unknown	gnl|CDD|377787

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_015032412.1|6552721_6554155_-|ethanolamine-permease	gnl|CDD|129986	TIGR00908, putative_ethanolamine_permease, ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily. [Transport and binding proteins, Amino acids, peptides and amines].	9.15796e-136
NZ_CP029195.1|WP_150507312.1|6568311_6569508_+|PAS-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.41309e-52
NZ_CP029195.1|WP_015032410.1|6555091_6556462_+|glutamine-synthetase	gnl|CDD|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.47477e-139
NZ_CP029195.1|WP_150507305.1|6550301_6551756_+|nitrate-reductase	gnl|CDD|224374	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism].	4.46245e-38
NZ_CP029195.1|WP_015032395.1|6569663_6570791_+|phenylalanine--tRNA-ligase-subunit-alpha	gnl|CDD|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP029195.1|WP_150508462.1|6556461_6557856_+|aldehyde-dehydrogenase-family-protein	gnl|CDD|365919	pfam00171, Aldedh, Aldehyde dehydrogenase family. This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.	0
NZ_CP029195.1|WP_015032398.1|6566827_6567214_+|50S-ribosomal-protein-L20	gnl|CDD|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	1.74462e-59
NZ_CP029195.1|WP_150507304.1|6549581_6550232_-|TetR-family-transcriptional-regulator	gnl|CDD|184958	PRK14996, PRK14996, TetR family transcriptional regulator; Provisional.	8.0315e-12
NZ_CP029195.1|WP_015032399.1|6566526_6566721_+|50S-ribosomal-protein-L35	gnl|CDD|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.31411e-21
NZ_CP029195.1|WP_015032397.1|6567391_6568231_+|RNA-methyltransferase	gnl|CDD|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	5.60296e-66
NZ_CP029195.1|WP_150507306.1|6551977_6552685_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl|CDD|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	4.36913e-82
NZ_CP029195.1|WP_150159802.1|6554273_6555002_-|FCD-domain-containing-protein	gnl|CDD|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.12269e-32
NZ_CP029195.1|WP_150507307.1|6557861_6558647_+|3-oxoacyl-ACP-reductase	gnl|CDD|180371	PRK06057, PRK06057, short chain dehydrogenase; Provisional.	0
NZ_CP029195.1|WP_078508611.1|6565680_6566403_+|translation-initiation-factor-IF-3	gnl|CDD|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	2.78341e-97
NZ_CP029195.1|WP_150507308.1|6558751_6560032_+|haloacid-dehalogenase-like-hydrolase	gnl|CDD|319796	cd02612, HAD_PGPPase, phosphatidylglycerol-phosphate phosphatase, similar to Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C. This family includes Escherichia coli K-12 phosphatidylglycerol-phosphate phosphatase C, PgpC (previously named yfhB) which catalyzes the dephosphorylation of phosphatidylglycerol-phosphate (PGP) to phosphatidylglycerol (PG). This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	9.47775e-14
NZ_CP029195.1|WP_150507310.1|6562945_6564112_+|type-VII-secretion-associated-serine-protease-mycosin	gnl|CDD|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	4.77737e-93
NZ_CP029195.1|WP_150159800.1|6560095_6561298_-|amino-acid-deaminase/aldolase	gnl|CDD|143488	cd06813, PLPDE_III_DSD_D-TA_like_2, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 2. This subfamily is composed of uncharacterized bacterial proteins with similarity to eukaryotic D-serine dehydratases (DSD) and D-threonine aldolases (D-TA). DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. DSD and D-TA are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on their similarity to AR, it is possible members of this family also form dimers in solution.	0
NZ_CP029195.1|WP_150507311.1|6564158_6564890_+|SseB-family-protein	gnl|CDD|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	3.20305e-20

Protein sequences

>NZ_CP029195.1|WP_150159800.1|6560095_6561298_-|amino-acid-deaminase/aldolase
MTPRAADRARYDRATAHLDAPVAIVDLEAFDDNAADLVRRAGGKPIRVASKSVRCRALLERVLAREGFAGIMSFTLDESLWLARAGFEDVLLAYPSADRTGFGELARDPKLAAAVTVMVDDVAQLDLIDAARAGGTEEVRVCLELDTALSLLGGRIRVGARRSPLREPAQLAELARSVARRPGFRLVGIMAYEGHVAGVGDAVAGRPLRSRAIRLMQAAARRELAERRAAVVRAVRAVAPDLEFVNGGGTGSVQHTAAEEAVTEIAAGSGLFVPRLFDNYTSFTGRPAALFAQPVVRRPGVGVVTVLGGGYPASGAAGPDRLPVPYLPEGLRYDPQEGPGEVQTPLLGSPADDLRIGDKVWFRHAKAGELCERFASLQLVEGDRITATVPTYRGEGQTFL
>NZ_CP029195.1|WP_150507308.1|6558751_6560032_+|haloacid-dehalogenase-like-hydrolase
MNQRVRLRPSAAATAALALAVTSLVPATATATEAESRDHRTPRPCPTLRVSEGWFGDNKARIDALVAEHCHDKGGKPVAVFDWDNTVIKNDVGDATFHWLLRNDRVRPPRDGDWSTTSRHLTPEAATALGAACPTGVRVLPTSTDTRCADELLSVYASGATTAGKTAFAGHDRRRMEPQYAWLAQLLHGWTTRQVESFAAAARAENLAAPQGATQRVGTAQVTGWVRYYPQQRDLIRTLQDAGFDVWIVSASPEPVVDVWAKGVGVAASHAIGIRNTTERGRLTAHLKGCGTVPDGEDTMITYIDGKRCWINQEIFGVRGPAAERVQPAARRQVFAAGDSDTDVSFLRDATGLRLVLNRNKNELMCRAYENGDGRWIVNPMFIEPKQRKTTPYPCASTGYTAGDGTAQPVRRSDGSVIPDQPDKVF
>NZ_CP029195.1|WP_150507307.1|6557861_6558647_+|3-oxoacyl-ACP-reductase
MTDTEIICRRLVGRTAVITGAGSGIGLATARRLASEGAHVVCGDIDETAGKAAAEEVGGTFVKVDVSDPEQVEALFKTAFDTYGSVDIAFNNAGISPPDDDSILETGLEAWKRVQDVNLTSVYLCCKAALPYMRRQGKGSIINTASFVAIMGAATSQISYTASKGGVLAMSRELGVQFAREGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHIPVGRFAEAEEIAAAVAFLASDDSSFVNASDFLVDGGISGAYVTPL
>NZ_CP029195.1|WP_150508462.1|6556461_6557856_+|aldehyde-dehydrogenase-family-protein
MPPPPAHASERTELLQVLNPATEEPVATVPAATPADVDAAVARAAAAQRGWAAAAPADRARLLRRFAAVVDDHAEELARLEVLEAGHTIGNARWEAGNVRDLLDFAAGGVERLNGRQIPVAGGLDITLLEPLGVVGVIAPWNFPMPIAAWATAPALAAGNAVILKPAETTPLTALRLAELALEAGLPEDLFQVLPGTGPVAGNALVEHPGIAKIVFTGSTRVGKSIMAKCADQVKRVTLELGGKSPNIVFADADIEAAAAAAPMSFLDNSGQDCCARTRILVQRSAYDRFMELLTPAIEEIVVGDPADERTQMGPLISRAQLDRVRSYVTDDLPGIRGKAPEGPGFWFPPTVLTDVPEGAPCAVEEIFGPVAVVFPFDDEADAIRLANATEYGLSGSIWTRDVGRALRASRAVKAGNLSVNSHSSVRYWTPFGGYQQSGLGRELGPDALTAFTETKNVFISTEA
>NZ_CP029195.1|WP_015032410.1|6555091_6556462_+|glutamine-synthetase
MADRKAPLAVEELRALVASGEIDTVVLAFPDMQGRLQGKRFAAPFFLDEVLGHGTEGCNYLLAVDTEMNTVGGYEMASWDRGYGDFAMHPDLTTLRRLPWNEATAMVTADLAWADGTPVVAAPRQILRRQLERLADHGFTAHVGTELEFIVFKDSYEQAWDANYRGLTPANQYNIDYSVLGTGRIEPLLRRIRNEMTGAGLTVESAKGECNPGQHEIAFKYDEALATCDGHAVYKTGAKEIAAQEGYSLTFMAKYDAREGNSCHIHLSLQSVDDPGTNVMAGDDPHGMSETMRHFLAGQLAALRDFSLLYAPNINSYKRFQPGSFAPTAVAWGHDNRTCALRVVGHGRSTRFENRLPGGDVNPYLAVAGLVAAGLYGIEQRLELPEPCSGNAYTAEYAHVPTTLREAAELWETSEIAKAAFGPEVVAHYRNMARVELDAFDAAVTDWELRRSFERH
>NZ_CP029195.1|WP_150159802.1|6554273_6555002_-|FCD-domain-containing-protein
MASTSESADRLTPVLRPVRAGNGFEEALEQILQVVRLGLVPGGERLPAERELADRMGISRVTLREVLKVLQEQGLVESRRGRYGGTFVLPRVQTADEDELRRRIASVDMEDTLRFREVLEVGAAGLCAAHGLDAAGAERLRAAVAATHDAPLADYRRQDTLLHLTLAELSGSPTLTAQYAAVRATVNDLLDCIPLLVRNLEHSQHQHTALVEAVLDGDADAAREVMREHCSGTAALLRGFLT
>NZ_CP029195.1|WP_015032412.1|6552721_6554155_-|ethanolamine-permease
MTLEDTTPPKDDYLERRALRRGSAGWLLLTGLGVAYVVSGDFSGWNIGLSKGGFGGLAVATVLMGAMYACLVFALAELSAILPTAGGGYGFARRALGTWGGFLTGTAILIEYILAPAAISIFIGDYVESLGLFGLESGWPVYLVCFALFIGIHLWGVGEALRFSLVVTAVAVAALVVFALGAFTDFHVDGLNDIPVDGEAFGASSWLPFGLLGIWAAFPFGMWFFLGVEGVPLAAEEAKDPVRSMPRALAISMGILVLLAVMTFFAATGARGSAAVQEAGNPLVVALQGDGEPTALSRFVNYAGLAGLVASFFSLIYAGSRQLFALSRAGYLPRFLSLTSRRKSPYLGLLIPGAIGFALAAGTGDGARMLNIAVFGATISYALMALSHIVLRRREPGLHRPYRTPGGIVTSSVAFVLALSALVATFLVDRTAAFMALGVYVIALAYFAFYSRHHLVARAPEEEFAALAAAEAELERD
>NZ_CP029195.1|WP_150507306.1|6551977_6552685_-|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MNKPLIGVTTYLDQARWGVWDMPAALLPARYPRLVQESGGIAVMLPPDAPETAAAVVARLDGLVVAGGADVEPVRYGAERDPRTGPPARERDAWELALIDAAIDAGTPLLGICRGMQLLNVARGGTLIQHLDGHTEAVGVIGRHAVKPVPGSRYASLVPELAEVPTYHHQAVDRLGAGLAASAHAEDGTVEAVELAAPAWVLGVQWHPEMGEDLRVMRGLVAAARAMSPDPAGRA
>NZ_CP029195.1|WP_150507305.1|6550301_6551756_+|nitrate-reductase
MASTIPDPLARSEGTPVDPPATDRPGRVEAHGIDHIPDTERHGHPRELFSVWAAANVNYLSLVIGGALVLMGLSLWQAVGVIVVGNLFWLLTGLLATSGPAAGAPSEVITRAVYGVLGNRVNNAVGGWLVSVCYFALNLAAAATAAFALVEKAGLTANTPVKVAVIVVIAALTLVISVFGHGLIIKLYLPITLVLAGAFTVVALAVLRHADFSYAPAEPVHGTALWALLLAGTTMIASGPLSYTTSADFSRYLPRTASKKAIVGWTAFGAFLPSVIVCSLGAFAATAVDMTDPQTALQEILPGWFVPVFLLALVIGTIAINALTAYSAGLALQAVGLPVRRSVSVLFDGAVAVALTLYGLLVSDFLDTVSNALQVITVLIGPMTAVYATDVLLRRCRYDGPALADETPGGPFWYTAGVNRAGALALVGGVTAAALCADTLYTGPVAAALGGVDLSLPAGMGVSAALYALLMRNDRVLTAARATA
>NZ_CP029195.1|WP_150507304.1|6549581_6550232_-|TetR-family-transcriptional-regulator
MPSSVPRKRIRKTPEARRAEIVETAARVALTEGLECVTLRRIAEELAVRPGLISHYFPSADDLVGEAFSVAATGELDALLPAERPHGTPTQYLARYFALSAGDAYDDISRLWINARHLSRYRPVLRDRVAEQELASDDRLERLIREGVERGEFRTDDPRTAAIQILVVLDGLGAHANTDRSNRPEAVTRMALTTAERELGLAHGALSDVPAPAEPS
>NZ_CP029195.1|WP_150507309.1|6562106_6562949_+|hypothetical-protein
MAHPFAPPFPAALPPETPVETTTRLRPVRPRRAGRAVAVGVCAVLGVGLIGGALAGLWLAAAEPGEPAEPAGYAKARDLWHNAPVDSLFPRSLAGPAAGPGASARTWTRIVVAPDAACSPAVLAKGLLATLRPLGCERVLRATYTDATASSVITVGLVFTRADAPAQRTLGQGLTTRLGADVPPTLPGPGTVAARFGPSQRASWWLNAPADLPVVVTAVSGFADGRTVDRPQPADGAMARGRTDAIAQSGLGHEARNITVRFEQLLRTAVAPPAKEKDPR
>NZ_CP029195.1|WP_150507310.1|6562945_6564112_+|type-VII-secretion-associated-serine-protease-mycosin
MTRLRIPAAALLAAAFTVLPATTTPAHADTIRARQWGLQALHTTEAWRTTKGEGITVAVLDTGVDAEHPDLKGSVLTGRDLIGFGAARGDRAWARHGTAMAGIIAGHGHGPDGGDGVLGIAPGAKILPVRVILEGTDTSRDKARKTRGSALADGIRWAADHGADVINLSLGDDSKSAHPDAGEDAAVQYALAKGVSVVASAGNGGEKGDHISYPAAYPGVIAVTAVDRYGTHASFSTRRWYATVSAPGVDIAIADPDRRYYEGWGTSAAAAFASGAVALVRAAHPALTPAQVKRLLIDTARSRPKGGRSDAKGYGTVDPAAAIEAGARIKGGDPKNVTTGYQGRYFGPGPVPPAEESHPVGLLAPLAGGLGALLLLTAVVLSRAGRNP
>NZ_CP029195.1|WP_150507311.1|6564158_6564890_+|SseB-family-protein
MALKNIPDPGFSDDDGTADPRLAAALAAWAEDRTAHGPVLDALREARLLVPVVAVLGEVETDENGLRREKTSDMAVPTLTAGDRRALPAFTSIASLALWDPEARPVAVPLHQALQAAAHEKADTVVLDLAGPVPYQLTGPALLALAEGRTSADPLDDPAVREAVRAAVAAEPAVLRAHLGPGTADGTLALVLAGDAAPAEAAQRVARALAADETLRARLVRGLDLALLPASATPPGEPFYVKK
>NZ_CP029195.1|WP_150159798.1|6565007_6565394_-|DUF1844-domain-containing-protein
MSETPQNESPDSADSPESPDFDAMTRDIAEVPAVEVIVTVAVNLMSAAAVKLGLTEEGDKYKDLDEARKLVHALAGLLDAGATEVSSFHAAPLRDGLKSLQLAFREASLIPDEPGQGPGEKYTGPVFG
>NZ_CP029195.1|WP_078508611.1|6565680_6566403_+|translation-initiation-factor-IF-3
MVSQKQTCASVRQAVAWCYRGGSISAEPRINDRIRVPEVRLVGPSGEQVGIVPLAKALELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGFRLLQRLASDVEELGFIESNPKQDGRNMIMVLGPHKKKTEAMAEAREAQAARKAERQGVSAEESPAAPADEAPAAEAPAETPEA
>NZ_CP029195.1|WP_015032399.1|6566526_6566721_+|50S-ribosomal-protein-L35
MPKNKTHSGAKKRFKVTGSGKILRERAGKRHLLEHKSSKLTRRLTGNAEMAPGDAAKIKKMLGI
>NZ_CP029195.1|WP_015032398.1|6566827_6567214_+|50S-ribosomal-protein-L20
MARVKRAVNAHKKRRAILEAASGYRGQRSRLYRKAKEQVTHSLVYNYNDRKKRKGDFRQLWIQRINAAARLNGMTYNRLIQGLKAANIEVDRKILAELAVNDANAFAALVEVAQKALPADVNAPKAAA
>NZ_CP029195.1|WP_015032397.1|6567391_6568231_+|RNA-methyltransferase
MVTPELISPRSPRVVAARRLAKRNFRGKDRLFIAEGPQAVREAVEHRGSTGEPTLVELFTTVEAAERYSAIIEAALASGARVHHASDAVLAEVSQTVTPQGLVGVCRFLDSPFEEIVAARPKLVAVLAHVRDPGNAGTVLRCADAAGADAVVLTDASVDLYNPKSVRASVGSLFHLPVAVGVPVEQAVAGLKSAGVRILAADGAGEDDLDAELDAGTMGGPTAWVFGNEAWGLPEETRALADAVVRVPIHGKAESLNLATAAAVCLYASARAQRPRTSA
>NZ_CP029195.1|WP_150507312.1|6568311_6569508_+|PAS-domain-containing-protein
MTVGTGRPAQARSAAPRAAEPPPAPGAEEPGAPEPGSPEPGAADPAGFAGIHPDDLPDGLVVADATGRVVTFNAAASRITAVPGAKALGLPLDQALPLEDLKGRRWWALTDPYGGLATRRGQPERNLLLPGGREVLVSARYVREHPTGPVRRVVVCLRGTEARRRTERSHAELIATVAHELRSPLTSVKGFTATLLGKWERFNDEQKRLMLETVDADAGRIKRLIAELLDISRIDSGRLEVRRQPVDIAAAIGRHVQVHTTGGQSPDRFFVRIRPELPALWADPDKIDQILGNLLENAVRHGEGTVTIEVAPAKTGDDGEEGTEVTVSDEGPGIPEESMSRVFTRFWRGSKRGGTGLGLYIVKGVVEAHGGTITVGRGPRGGAEFRFILPVGTPAHLL
>NZ_CP029195.1|WP_015032395.1|6569663_6570791_+|phenylalanine--tRNA-ligase-subunit-alpha
MSAPNKSYDPVEVEALKPEEIERMRDEALAAFAAAGDLDALAHAKTAHTGGTSPLALANREIGALPPQAKAAAGKLVGQARGIVSKALAARQTELEAERDARVLVEEAVDVTLPYDRVPAGARHPLTTLMERVSDVFVSMGYEVAEGPEVEAEWFNFDALNFVPDHPARQMQDTFFVQGPEGTTGDESGVVLRTHTSPVQARTLIDREPPVYVVCPGRVYRTDELDATHTPVFHQIELLAVDEGLTMADLKGTLDHMVQALFGPDMKTRLRPNFFPFTEPSAEMDMLCYVCRGESVGNPDRPCRTCGSEGWIELGGCGMVNPKVLVACGVDPEKYSGFAFGFGIERMLMFRHNVDDMRDMVEGDVRFTRPFGMEI

Crispr_ID: NZ_CP029195_14

• CRISPR_ID: NZ_CP029195_14
• CRISPR_location: 7380252-7380339
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_14

Consensus_repeat	Method
GGAGGTGGCGACACCGGTCCCGG	CRISPRCasFinder

spacers of NZ_CP029195_14

>14.1|7380275|42|NZ_CP029195|CRISPRCasFinder
CGTCCCGGCCCCGGGCCGGCGCGGGGGAGACACCGTAGGAGC

CRISPR arrays and Neighbor proteins around NZ_CP029195_14

CRISPR arrays

The CRISPR arrays of NZ_CP029195_14

>merge|NZ_CP029195|14|7380252-7380339|CRISPRCasFinder
GGAGGTGGCGACACCGGTCCCGGCGTCCCGGCCCCGGGCCGGCGCGGGGGAGACACCGTAGGAGCGGAGGTGGCGACGCCGGTCCCGG

>NZ_CP029195|14|13|7380252-7380339|CRISPRCasFinder
GGAGGTGGCGACACCGGTCCCGG	CGTCCCGGCCCCGGGCCGGCGCGGGGGAGACACCGTAGGAGC
GGAGGTGGCGACGCCGGTCCCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist	unknown	unknown	gnl|CDD|132914
NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase	unknown	unknown	gnl|CDD|235870
NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein	unknown	unknown	gnl|CDD|212140
NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274373
NZ_CP029195.1|WP_150507773.1|7372069_7372765_-|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl|CDD|225002
NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914
NZ_CP029195.1|WP_150507775.1|7373586_7375098_+|MFS-transporter	unknown	unknown	gnl|CDD|273327
NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator	unknown	unknown	gnl|CDD|225107
NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP029195.1|WP_150507778.1|7378580_7379141_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|223650
NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224059
NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase	unknown	unknown	gnl|CDD|181154
NZ_CP029195.1|WP_150507772.1|7368067_7372081_+|acyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|225858
NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein	unknown	unknown	gnl|CDD|225747
NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|238042
NZ_CP029195.1|WP_015031685.1|7378174_7378498_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507774.1|7372798_7373602_+|enoyl-CoA-hydratase	unknown	unknown	gnl|CDD|180591
NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP029195.1|WP_150507771.1|7361334_7368066_+|AMP-binding-protein	unknown	unknown	gnl|CDD|225858

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.04941e-28
NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase	gnl|CDD|235870	PRK06834, PRK06834, hypothetical protein; Provisional.	2.40683e-157
NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein	gnl|CDD|212140	cd11533, NTP-PPase_Af0060_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in uncharacterized protein from Archaeoglobus fulgidus (Af0060) and its bacterial homologs. This family includes an uncharacterized protein from Archaeoglobus fulgidus (Af0060) and its homologs from bacteria. Although its biological role remains unclear, Af0060 shows high sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, members in this family consist of a single MazG-like domain that contains a well conserved divalent ion-binding motif EXX[E/D].	8.2413e-19
NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	gnl|CDD|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	5.96025e-100
NZ_CP029195.1|WP_150507773.1|7372069_7372765_-|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl|CDD|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	1.0435e-40
NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein	gnl|CDD|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.60721e-14
NZ_CP029195.1|WP_150507775.1|7373586_7375098_+|MFS-transporter	gnl|CDD|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.76103e-61
NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.19657e-71
NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.61115e-35
NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.10254e-100
NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase	gnl|CDD|181154	PRK07869, PRK07869, amidase; Provisional.	0
NZ_CP029195.1|WP_150507772.1|7368067_7372081_+|acyltransferase-domain-containing-protein	gnl|CDD|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein	gnl|CDD|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	0.00317306
NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.42195e-05
NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.43607e-22
NZ_CP029195.1|WP_150507774.1|7372798_7373602_+|enoyl-CoA-hydratase	gnl|CDD|180591	PRK06494, PRK06494, enoyl-CoA hydratase; Provisional.	5.02304e-133
NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.45901e-12
NZ_CP029195.1|WP_150507771.1|7361334_7368066_+|AMP-binding-protein	gnl|CDD|225858	COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	0

Protein sequences

>NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist
MPRDATVTGDVGPTGPRLTAAVRWSGATAVVTVTGELDRDTQEPLREALAGALERRPERIVVDCAQLAFCDSTGLNLLLTTRLEAIEAGGGLELAALSPPVARVFDITGVIAVFTVYEELPGELAEGEQP
>NZ_CP029195.1|WP_150507778.1|7378580_7379141_-|hypothetical-protein
MADDGTGRESDDGRGRTGGTGAAGGTGRRRGREETADERADRQWQDLLQETRVAQTGVQILLGFLLTVVFTPRFESLGSADKGIYIATVVLGSLATGALIGPVSFHRVVAGRRLKPHAVTWASRLIFVGIVLLLATLTSALFLILRVATDDGLVPWIVGAVLAWYLLCWFALPLWARRRHTAEREE
>NZ_CP029195.1|WP_015031685.1|7378174_7378498_-|hypothetical-protein
MPRGSSPKRERQYEHIKESAEQRGESEKRAKEIAARTVNKERARHGESETASKLSLEDMSSGERGGKRSHSGAQGRTYDQLYEEARRRNLDGRSKMNKAQLKRALDD
>NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase
MTTFEERETVHAFRDDALGEHDAVGLAAAIRRGEVGAAEVAEDAAERVRQVEARLHAVQTRVDAPVPGTAGGALAGVPTFVKDNTDFLGLPTGHGSAAFTPRTARRHAPFARQLLSSGVTVLGKTRLPEFGFSPATEYEHAEPVRNPWNTAYSAGGSSGGSAALVAAGAVPIAHANDGGGSIRIPAACCGLVGLKPTRGRVVTNDQSRRLPLDIVSDGIVSRSVRDTAAFLAAAETHWRNPGLPPLGLVEGPSDRRLRIGFLVDSPNGVRADAVTRAAVDETVATLERLGHTVEPVELDLDPRFTEDFLVYWGLLSFLLGVTGRTLGADFDRHRMDGLSRGLREEYLKSWRRTPAVLRRLKRTKVAYAAAFRGLDLVLTPVLAHTTPRIGHLSPTVPYPTLVERILAYVAFTPVNNVVGTPSISVPAATTTQNGLPVGVMFSGRPGSERTLLEVAYALEADRPFRRIQDVSRPERA
>NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase
MFDVIVVGGGPTGLMLAGELRLHGVRVLVLEKETEPTRQSRAQGLHVRSIEVMAQRGLLERFLERGHTVAVGGFFAGLATSWPERLDTAHSYVLAVPQVITEQLLAEHATALGAEIRRGRALVGLRQDEDGVTVDLADGEQLRARYVVGCDGGRSTVRKLLGVAFPGEPSRVETLLGEMEMTASQEELTSVMTEVRKIQQRFGAMPLGDGVFRVVVPAEGVAEDRTAAPTLDEFKQQLRAHAGTDFGVHSPRWLSRFGDATRQAERYRVDRVFLAGDAAHIHPPTGGQGLNLGIQDAFNLGWKLAAEVDGWAPEGLLDTYHAERHPVATEVLDNTRAQIQLMSTEPGPQAVRRLMAELVEFENVNRYLIEKITAISVRYDVGEGHELLGRRMRDLALKHGRLYERMHEGRGLLLDQTGRLSVAGWEDRVDHVVEVSEELDVPAVLLRPDGHVVWAGEDQQELLTRLPAWFGAATAG
>NZ_CP029195.1|WP_150507775.1|7373586_7375098_+|MFS-transporter
MDRHLTEQPPRDGPAPDGTAPARRTGSRRNHPHGKANAMRLHNAPGPGRAGAPPPPARLSVQEFLDGAPMGPRQRLVALIGLVVMIAEGLDISIASFVYPHLIREWGTSMSAVTTTVTAGVLSMAAGGAVAGPLADRYGRKGVTVAGLLLFGAATAAMALTTTVGPFATLRVVACAGLGAVAPVVMAVVADATPAARRAPVVALAFAGVAAGTVAGGLFASTVIPGLGWPAALAICGLAPLLLIPLVVAYVPESVSVLLARGRPAERIRETLALLAPGRDTSHVDLTGARDQERQPRQRVGALVLSRAFTGTTLLIWFCYFVLLGVVFLLLNYLPLLGERAGLTAARTGFAVGLFGAGTLCGQLLASLGLRRYDRFRALALASSLSALVVGVTAAARTGHTGMFVLVAALGVCLGASLGALQAVGALAYPATLRATGMGWMSGWGRLGTLASGVLGGVLIGAGWGISQLFLLLCVPLAVTGAAALALRREVTRRGGDAEGPRP
>NZ_CP029195.1|WP_150507774.1|7372798_7373602_+|enoyl-CoA-hydratase
MLDDLRCVRYEKRGHVAYVTLDRPHVLNATDLRTHAELARVWDDFEADDDLWVGVLTGAGERSFSVGQDLKELADRDERGAPHATFGSRGKPGWPRLTERFSLFKPLIARVNGYALGGGFELAMACDIVIAAEHAEFALTEARLGLVAGAGGVFRLTRQAPFRVAMGHLLTGRRMTAARAYELGLVNEVVPAHRLDACLDGWVEDVLSCAPLALRAAKEAATVSAGLPLERAFATRYVWEERRMVSRDAVEGPRAFVEKRPPKWTGT
>NZ_CP029195.1|WP_150507773.1|7372069_7372765_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MTSEISPVRVLRAGAVPDPSVPPVVDGSVALWLVPVTADPGAYELLDAGERQRSAALLREADRTRYLAAHGGLRRLLGHYLGTPPDEVVFVREDCPLCGGPHGRPAVRDGGIHFSLSHSEDLVLVGVAGRPVGVDVEAFPAAGVSDLVADTLHPREREEFARLAPEVRTAAFTRCWVRKEAYLKGTGEGLAGGLERTYVGTGPWPAAVPGWSLTDVPVRPSYAAAVALSQQ
>NZ_CP029195.1|WP_150507772.1|7368067_7372081_+|acyltransferase-domain-containing-protein
MTGTEEKLVDYLKKVTAELHETRRQLRGALAASREPIAIVGTACRYPGGVRTPEALWRLVLDEQDAISGFPTNRGWDIDGIYHPDPDRPGTCYAREGGFLHDAALFDAEFFGVSPREAQAMDPQQRLLLETAWEAFERAGIDPTSLRGSDTGVFAGVVHHDYATARVPETLEPYLVTGLSGGVASGRIAYTFGFEGPAVTVDTACSSSLVALHQAAHALRSGECELALAGGVTIMATPRAFLSFSRQRGLSPDGRCRAFGAGADGTGWAEGAGMLLVERLSDARRKGHPVLAVLRGSAVNQDGASNGLSAPNGPSQQRVIRKALAHAGLAARDVDVVEGHGTGTKLGDPIEAQALLATYGQERDEGLPLHLGSMKSNVGHSQAAAGVGGVIKMIEAMRHGILPRTLHADEPTPHVDWSAGDIELLTRRRAWPETGRPRRAAVSSFGISGTNAHVILEAPPEEPAREAVETRPEVPSREAAETHPGAPSREAAEGRPEAAGQGRTETGPGPSATSPEAPGRARPPVPWPLSGRDAGALRDQIGRLRAHLDAAPADPEDVAHSLARRAVFRHRAVLLAAPQAPAGASPRAVTGVARPGGTALLFSGQGSQRVGMGRELYETYPVFAESFDAVAEHTGLPLKDVVLGGTPDGLLDRTRYAQPALFAVEVSLFRLVRALGLDVRAVVGHSVGEIAAAHAAGVMSLADACRLVEARGRLMDALPPGGAMVAVEVSEAEASAALAGLEDRVAVAAVNGPASTVLSGEEGAVLKLADAWRERGVRTHRLAVSHAFHSPLMEPMVDAFREVVAGLDLHRPTLAGLPAEVVDPEYWVRHVRRPVRFADAVARAREAGAVRWLEVGPGGVLTALAQRIVPDTEEHVFAAALRTDRPEPEALLVALSQVHVDGGTVDWSGLCAGGRLVDLPTYPFQRQHYWIEDQPLPPPAPTPGTAPSGTGTAAEAPAAAEAPLSERLARLTGAERLAAVRELVLAEASETLGHTGTLITADRTRQELGFDSLTAIELRNRISRTLGVRLPPTLVFDHEDLGEIASFVEARLDDAATGRSTGHGPLGEDGSGLLTELFREAAAAGRLDDAVTLTEAAARMRRTFTDAEDPAVRRTPVWFGRGPARPTVVCLPSFSAIAGVHVYARFADAFGDGWRVAALAHPGFVPGEPLPDSVDVLAELHARTVLDTVGAEPFLLVGRSAGGWVAHEVAAVLERMGRAPDGVALLDTPARADDPRGHAVMVGGMLERDSRLVTIDDYRLTAMGGYSRLFREWKPEPIAAATLLVHAATPYGAEEARIASWDLPHQAVKVTGDHFTMLERHSATTAEAVEQWSRSLL
>NZ_CP029195.1|WP_150507771.1|7361334_7368066_+|AMP-binding-protein
MTQVDDIRPLSAVLRAHALDRPDKVAFADEERHVTYARLAERTGRLAGHLAGHGLRRGDRVAILLGNSVTTVESYLAVTRAAAVGVPVNPQSSDAELAHQLDDSGARFVITDGPHLDQVERLRATREGIRVVLASGGAPAPEKGAPALDGTPALDGTPALDGTPAPDGPLSFEELAGSEPAQAPRDDLGLDEPAWILYTSGTTGAAKGVVSHQRACLWSVRSSYQGVLGLGPDDRLLWPLPLFHSLAHILCVLGVTVSGATARILPGFGARDVLDALRAEPCTMLLGVPSMYLRLVAAVEAVEEAGGSVPKPRLCVVTGAATGPELASAVERVLGAPLVNSYGATETCGAITLSRPESERPPGTVGTAVPGSELRLVDPRTGRDARTGDEGEVLVRSPGLLLRYHDRPEETAAALRDGWYRTGDLARRDAAGRLTITGRVKELVIRAGENIQPGEIEDVLRTVPGIADAAVTGRPDEALGEVPVAYVVPAAGGWSPAEALAACRERLSYFKVPAELYEIAALPVTGSGKVTRRALPGLPARLRALGTGHHEQLWRTTWVRCPASDAAAEPAGAARWAVIGAEVPAFAEAVRRRGGVAETFPDPAAARAAGPFDGHLLRAPAPEPDAPAEAAAESPFRTAEGPPGARTLLLTRSGVSTGPDDTPDPTASAVRARLLARGGDGTVLVDLGPEDPRPAGDLAEAEAEAEAEAEAEAGAEAEAGAEAEAEADGAFTGAAGRDADTGDGPGSDVPSPDVEAWLAVLSAPAGETEFALRSGAALVPRLARVRAAGEVALPSGGPGAALVTGAGTGISRVLATHLVVNHGVRDLVLADAGEDGDPGAAATLAADLTGLGATVTVRTGRPDTAERAAALLGALGPDRPFALVVHPVTAPADVEAADLLLDLTRRSGGTTLVLCGRAAPGDPSEAAAAAHAAALTHDVAHATFLAFGPVAPEAPQPGLAALTAREAGDALDAVRATAGGPALVLRTDPWTLRAPGAERLRRMLPRYAEDTAAPAALDEGLRERLGVLPGRARQRALTALVREEAAGVLGLDAPRRIDAGLAFTRLGLTSLSAVALRDRLAARTGLRLPVTLAFDHPTPAAVAAVLDGELFGARPATGADRRTSEVAGPSHRTDPGHDAHDPVVVIGMSCRYPGGITSPEDLWRFVAEGRDAIGPFPTDRGWDLERLLSGDGTAPGTSATGSGGFLDAPGDFDAAFFGVSPREALAMDPQQRLLLEVGWEAVERAGIDPTSLRHTDTGVYVGLMFHDYAQHTGDLPEDLERLLGTGTAGSVASGRLAYTLGLNGPALTVDTACSSSLVAVHLAAQALRRGDCSLALAGGVAVMATPSTFVEFSRQHGLAADGRCKAFGEGADGTGWSEGVGVVALERLSDARRGGHPVLAVIRGSAVNQDGASNGLTAPSGPAQQQVIRRALADAGLTPGDVHAVEAHGTGTVLGDPIEANALLATYGRDRDPERPLLLGSFKSNIGHAQSAAGVGAVIKMVQAIRYGELPRTLHAERPTPAVDWSGGAVRLLREHTPWPVTGDRRRAAVSSFGVSGTNAHLVLEQAPEPDAPPTLPPAVHPDTVPVLLSARTPSALRRQAERVLDAVRADPGLPVPDLAAALATTRTAFPRRAAFVVEGRVELERRLRSFADGEDGGADPDEVPAEPSLAIGFTGQGSQHPGMGRELYAAFPVFAEALDAAWAALDPHLERPLRDVMWAPDGTARAALLDRTDFTQAALFALEGALFRLVESWGVVPDVVLGHSVGALTAAHAAGVLSLPDAASLVAARGRLMAALPPGGAMTSIEATEDELRTELRTTDGVLAIAAVNGPRSVVVSGEEKAVRTVGEAFRARGRRVTALRVSHAFHSPLMDPMAEEFRAAAARVTYRPPLLPVISDLTGRPAEPAHLRSPDHWVRHVRETVRFADAVRALPGQGVTAFLELGPDRQLTTMAAAGASGSGPALCGGLRRGRSEVRSLLDAVAQAHVRGVPVDWREFFAGAPTRPVDLPVYPFEHRRYWLASAPTRTGGATSVPEAPAPPPGDAPGPDRLRADLAPLTDDERERRLTDLVRGEIAAVAGFDGPHEIEAHRSMTDLGLDSVSAVDLSTRLGARTGLDLPASLAFDHPTSTAIARHLLAALRTQDLTQESGQDGGTEGGKHGGTRAAEGTVFGTLARLEASVDRDRPDAAARDRLVERLRALTARLTEGPAGGPSADDTSIGDRIDEATTVDQLFDLIDNELKGP
>NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor
MSNHRTTARIGRTSALPPRAGPEPPAEALTGLPEIADPLAVSTSDARTLSTALFERLRSLDEGTASYSYVRNTLVELNLSLVKYAATRFRHSSENWEDLVQVGTVGLIKAINRFDPARGNEFMSFALPTVLGEIRRHLRDTSWSVHVPRRLQELRLDVAKANDALEQELGRPPTAAELSDRLHITEDELREGRIAANGFASRSLDVPVDDEDAGPGMLARCLGSDDDAFEKVLNLEALKPLVAALSERDRTILALRFGGELTQAEIGERLGLSQMHVSRLLSRILSGLRTALTTEDPPTAPAVTGSPASGIRGTAAARRVAAKRT
>NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein
MAQALEVAALEPGTPPSATAVGDALLVTSELVTNALRHAGGLTGFDVDVDASAVTISVADPSGELPRFTDARGRERACGAVEGGFGWPLVRQLAEEVRVFLPPDDGKTIEARLPLH
>NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein
MFFLTYFATHADDGDEKPIVAGPWEPTMNPTPLASVPAAPPRMTTAVTPDGTVLVSGEIDAATAPALLRTLTRALRAHPGGVALDLSAVTFCDCAGLRAFLAARYQHLDTVRFPLRVVAASPRMTRLLRLTGTGWLFEEPRTGPVQ
>NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator
MSDSAGDRQAWTFLTNHARVLVVIARDPGVRLRDVAAACGVTERTVQAIVADLEAAGYLTHAREGRRNRYRLAPGKRFRHPLEGDYEITGLLDLLKASPGDGSTGRHAADRDGDGRSRAGRPEGDHAERDGDGRSRAGRPDGDHGHDGAPRPGAGPRVLR
>NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein
MRDDDPWDTIRSLAALFTEFDAGRGLEPEEQWTMQVLKLTEEVGEAAQAVIGARASNPRKGRSHSWEQVQEEVVDAVVTGMVALTRMRPDDAPEFFAAVLARKAAKFLPHDDGPVVTSR
>NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator
MTEQPPRILLADDQTLVRTGFRMILGADGIDVVAEATNGAEAVEAVRRTRPDVVLMDVRMPEMDGLEATRRILTGAPDQPRVIILTTFDLDRYVYAALSAGASGFLLKDVTPEHLTAAVRTVRTGDALLAPAITRRLVQRFTQRGSDTAALHRDLASLTPRELEVLSLLARGLSNAELATRLHLAEATVKTHVARILAKLGLRDRVQAVIVAYETGLVSVGPGEAAQQSTEQT
>NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase
MNVRTMLERLRAAGREAVRDARRPTGPPLRLSRRAWQFDVLVALTLGIATVHYGIDNTDVVVVREIAPGVNHVMPRPSGPGGMAFMVTLAVIASGALALRRRFPLAVLCVVTAAVLATPQSVMRLTFYAFVIAVYSAAVHSPYRVATLAALPVSVLLVGTSGNSVTPIIPNEYIALLILVPMAGAALGLRTWKLRTDEGRTRLSALEREQAEALRRAVEHERARIARELHDVVTHNVSVMVIQAGAARKIMKTSPEQAGEALLAVEAGGRAAMTELRHVMGLLTMADEGEGTDEDPDVTGTAAELAPQPGLDQLESLVGRVRDAGLTVDVTVTGPPRPLPPGLELAAYRVVQEALTNTVKHASGSTAAVTVEYGPDRLRVEVTDTGGHPGADAAAGNGRGLIGLRERLAVYDGTLHAGRRLTGGYRVEALIPLEAP
>NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein
MTTPVIELREVSRRYNDGPPALHEASLTVRPGEAVAVLGPSGSGKSTLLNLVAGLDRPDAGSVTVEGVRVDRLGEAGAARYRRSKIGMVFQFFNLLDDLTVTDNVVLPARLAGMARGEADRRAAQLLETLGIDRHARAYPGRLSGGERQRVAVARALMNRPPLLLADEPTGALDTAAGQDVSKLLTDLNSEGQTIVVVTHDLALARSCTNRTVRIADGRITEDLMSPAVAPEAVR
>NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein
MSALGKVVRSGVGRRRVQTLVIGLATMMAVAASVLGGSLLVVSGAPFADAFAEQRGAHLSVEFDAGQVSAGRLSESADTEGVSSAAGPFRTATVAPTSDGAGSGWPMTVVGRGDPGRDVDEVALLDGRWPTRSGEIVLSAGSSLIPTLGTKLTFPGLSGGPTLTVVGVARSVTQTADAWVVPSQMPALTAPGSGGYQMLYRFTDAATAGQITAGAKAVTKDLPTGAAVGKQSWLTVKKNAERDTALYVPFLIAFGALGLVMSVLIVGNIVAAAVGAGTRRIGILKAIGFTPAQVVRAYVGQALIPAAVGTALGVLAGHLLAVPVLAETEEVYGSSSLTIAPWVDAAVIGGVLGLVAATAWASAWRAGRLRTVDALAVGRGTSMRRGRWAARLAGRLPLPQPVALGLARPFARPARALAMGTAVLFGTIAVTFTVGMVASLGEVMKAKAHDVADVTVPAPMPDFGPQSPASQKKPRADPAAVAAAIEAGAGTAKHYSAATVRATVSGVTGTVDVIAFTGDASWGGYTMVSGRWTDKPGEAVVPTPFLAATGTRIGDTVTVNGLDRPVTVRIVGEVLDPRNDGMQVFTDAKSLAGAHPDLTETSHHIAVASGTDVTGYVDALNKDLAPLGATAQAGGLGRGSDMVVTLNSLSAILTLMLVAVAALGVLNGVLLDTRERVREIGVHKALGMTPRQTVAMVLTSVVVTGLVAGALGVPLGVTLHGWVFPAMGDSAGLRLPDSVIAVYHGAELFPLALGGLLIATLGALLPAGWAARARTATALRTE
>NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein
MARLTEESKTRNEAAIRAAMERILSGNLPPWGKADLKTLATLARVTRTGFYPKSNRDGSTRRGAYQHLAEEFERRLREFRDAGEILDPRVAQIDRLKKENAELRKRIGARDEQLAELTDSKSLAISQLATQHDEIERLRKQVAANHNVRPLPAPSRAVPFGSCS

Crispr_ID: NZ_CP029195_15

• CRISPR_ID: NZ_CP029195_15
• CRISPR_location: 7383149-7383247
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP029195_15

Consensus_repeat	Method
CGGCACAACGGCGTCGTCCCGCCCCGGACCCGCGCGG	CRISPRCasFinder

spacers of NZ_CP029195_15

>15.1|7383186|25|NZ_CP029195|CRISPRCasFinder
CCGGACCGCCCGCGCGGGTCCGGGG

CRISPR arrays and Neighbor proteins around NZ_CP029195_15

CRISPR arrays

The CRISPR arrays of NZ_CP029195_15

>merge|NZ_CP029195|15|7383149-7383247|CRISPRCasFinder
CGGCACAACGGCGTCGTCCCGCCCCGGACCCGCGCGGCCGGACCGCCCGCGCGGGTCCGGGGCGGCACAACGGTGTCGTCCCGCCCCGGACCCGCGCGG

>NZ_CP029195|15|14|7383149-7383247|CRISPRCasFinder
CGGCACAACGGCGTCGTCCCGCCCCGGACCCGCGCGG	CCGGACCGCCCGCGCGGGTCCGGGG
CGGCACAACGGTGTCGTCCCGCCCCGGACCCGCGCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist	unknown	unknown	gnl|CDD|132914
NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase	unknown	unknown	gnl|CDD|235870
NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein	unknown	unknown	gnl|CDD|212140
NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274373
NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|238042
NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein	unknown	unknown	gnl|CDD|132914
NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|226951
NZ_CP029195.1|WP_150507778.1|7378580_7379141_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|223650
NZ_CP029195.1|WP_150507791.1|7393261_7393939_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507789.1|7391084_7392764_-|integrase	unknown	unknown	unknown
NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224059
NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase	unknown	unknown	gnl|CDD|181154
NZ_CP029195.1|WP_150508503.1|7379862_7380312_+|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein	unknown	unknown	gnl|CDD|225747
NZ_CP029195.1|WP_150507792.1|7394209_7395715_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507790.1|7392911_7393124_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_015031685.1|7378174_7378498_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein	unknown	unknown	gnl|CDD|340413
NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator	unknown	unknown	gnl|CDD|225107

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.04941e-28
NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase	gnl|CDD|235870	PRK06834, PRK06834, hypothetical protein; Provisional.	2.40683e-157
NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein	gnl|CDD|212140	cd11533, NTP-PPase_Af0060_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in uncharacterized protein from Archaeoglobus fulgidus (Af0060) and its bacterial homologs. This family includes an uncharacterized protein from Archaeoglobus fulgidus (Af0060) and its homologs from bacteria. Although its biological role remains unclear, Af0060 shows high sequence similarity to the dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTP pyrophosphatase or dUTPase) and NTP-PPase MazG proteins. However, unlike typical tandem-domain MazG proteins, members in this family consist of a single MazG-like domain that contains a well conserved divalent ion-binding motif EXX[E/D].	8.2413e-19
NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor	gnl|CDD|274373	TIGR02980, SigBFG, RNA polymerase sigma-70 factor, sigma-B/F/G subfamily. This group of similar sigma-70 factors includes clades found in Bacilli (including the sporulation factors SigF:TIGR02885 and SigG:TIGR02850 as well as SigB:TIGR02941), and the high GC gram positive bacteria (Actinobacteria) where a variable number of them are found depending on the lineage.	5.96025e-100
NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator	gnl|CDD|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.42195e-05
NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein	gnl|CDD|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.60721e-14
NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	7.61115e-35
NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	2.10254e-100
NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase	gnl|CDD|181154	PRK07869, PRK07869, amidase; Provisional.	0
NZ_CP029195.1|WP_150508503.1|7379862_7380312_+|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	3.13907e-14
NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein	gnl|CDD|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	0.00317306
NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein	gnl|CDD|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.43607e-22
NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein	gnl|CDD|340413	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains. This family includes histidine kinase-like ATPase (HATPase) domain of RsbW, an anti sigma-B factor as well as a serine-protein kinase involved in regulating sigma-B during stress in Bacilli. The alternative sigma factor sigma-B is an important regulator of the general stress response of Bacillus cereus and B. subtilis. RsbW is an anti-sigma factor while RsbV is an anti-sigma factor antagonist (anti-anti-sigma factor). RsbW can also act as a kinase on RsbV. In a partner-switching mechanism, RsbW, RsbV, and sigma-B participate as follows: in non-stressed cells, sigma-B is present in an inactive form complexed with RsbW; in this form, sigma-B is unable to bind to RNA polymerase. Under stress, RsbV binds to RsbW, forming an RsbV-RsbW complex, and sigma-B is released to bind to RNA polymerase. RsbW may then act as a kinase on RsbV, phosphorylating a serine residue; RsbW is then released to bind to sigma-B, hence blocking its ability to bind RNA polymerase. A phosphatase then dephosphorylates RsbV so that it can again form a complex with RsbW, leading to the release of sigma-B.	1.45901e-12
NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.19657e-71

Protein sequences

>NZ_CP029195.1|WP_150507783.1|7382635_7383118_+|MarR-family-transcriptional-regulator
MSDSAGDRQAWTFLTNHARVLVVIARDPGVRLRDVAAACGVTERTVQAIVADLEAAGYLTHAREGRRNRYRLAPGKRFRHPLEGDYEITGLLDLLKASPGDGSTGRHAADRDGDGRSRAGRPEGDHAERDGDGRSRAGRPDGDHGHDGAPRPGAGPRVLR
>NZ_CP029195.1|WP_150507782.1|7382141_7382582_-|STAS-domain-containing-protein
MFFLTYFATHADDGDEKPIVAGPWEPTMNPTPLASVPAAPPRMTTAVTPDGTVLVSGEIDAATAPALLRTLTRALRAHPGGVALDLSAVTFCDCAGLRAFLAARYQHLDTVRFPLRVVAASPRMTRLLRLTGTGWLFEEPRTGPVQ
>NZ_CP029195.1|WP_150507781.1|7381797_7382148_+|ATP-binding-protein
MAQALEVAALEPGTPPSATAVGDALLVTSELVTNALRHAGGLTGFDVDVDASAVTISVADPSGELPRFTDARGRERACGAVEGGFGWPLVRQLAEEVRVFLPPDDGKTIEARLPLH
>NZ_CP029195.1|WP_150507780.1|7380570_7381548_-|SigB/SigF/SigG-family-RNA-polymerase-sigma-factor
MSNHRTTARIGRTSALPPRAGPEPPAEALTGLPEIADPLAVSTSDARTLSTALFERLRSLDEGTASYSYVRNTLVELNLSLVKYAATRFRHSSENWEDLVQVGTVGLIKAINRFDPARGNEFMSFALPTVLGEIRRHLRDTSWSVHVPRRLQELRLDVAKANDALEQELGRPPTAAELSDRLHITEDELREGRIAANGFASRSLDVPVDDEDAGPGMLARCLGSDDDAFEKVLNLEALKPLVAALSERDRTILALRFGGELTQAEIGERLGLSQMHVSRLLSRILSGLRTALTTEDPPTAPAVTGSPASGIRGTAAARRVAAKRT
>NZ_CP029195.1|WP_150508503.1|7379862_7380312_+|ATP-binding-protein
MVARCRDFCRVALEDWDWPGSPGTTGLTPAERELAIEDVLLVVSEAVTNACLHAGGPTELVIRLAPADPRRPADVAGDLRIEVSDRSSRTPAFRPHGAPGTPGGNGLIVIDRLTRAWGAVTTEAGKSVWMEVATPVPASRPRAGAGETP
>NZ_CP029195.1|WP_150507779.1|7379372_7379765_+|anti-sigma-factor-antagonist
MPRDATVTGDVGPTGPRLTAAVRWSGATAVVTVTGELDRDTQEPLREALAGALERRPERIVVDCAQLAFCDSTGLNLLLTTRLEAIEAGGGLELAALSPPVARVFDITGVIAVFTVYEELPGELAEGEQP
>NZ_CP029195.1|WP_150507778.1|7378580_7379141_-|hypothetical-protein
MADDGTGRESDDGRGRTGGTGAAGGTGRRRGREETADERADRQWQDLLQETRVAQTGVQILLGFLLTVVFTPRFESLGSADKGIYIATVVLGSLATGALIGPVSFHRVVAGRRLKPHAVTWASRLIFVGIVLLLATLTSALFLILRVATDDGLVPWIVGAVLAWYLLCWFALPLWARRRHTAEREE
>NZ_CP029195.1|WP_015031685.1|7378174_7378498_-|hypothetical-protein
MPRGSSPKRERQYEHIKESAEQRGESEKRAKEIAARTVNKERARHGESETASKLSLEDMSSGERGGKRSHSGAQGRTYDQLYEEARRRNLDGRSKMNKAQLKRALDD
>NZ_CP029195.1|WP_150507777.1|7376766_7378197_+|amidase
MTTFEERETVHAFRDDALGEHDAVGLAAAIRRGEVGAAEVAEDAAERVRQVEARLHAVQTRVDAPVPGTAGGALAGVPTFVKDNTDFLGLPTGHGSAAFTPRTARRHAPFARQLLSSGVTVLGKTRLPEFGFSPATEYEHAEPVRNPWNTAYSAGGSSGGSAALVAAGAVPIAHANDGGGSIRIPAACCGLVGLKPTRGRVVTNDQSRRLPLDIVSDGIVSRSVRDTAAFLAAAETHWRNPGLPPLGLVEGPSDRRLRIGFLVDSPNGVRADAVTRAAVDETVATLERLGHTVEPVELDLDPRFTEDFLVYWGLLSFLLGVTGRTLGADFDRHRMDGLSRGLREEYLKSWRRTPAVLRRLKRTKVAYAAAFRGLDLVLTPVLAHTTPRIGHLSPTVPYPTLVERILAYVAFTPVNNVVGTPSISVPAATTTQNGLPVGVMFSGRPGSERTLLEVAYALEADRPFRRIQDVSRPERA
>NZ_CP029195.1|WP_150507776.1|7375127_7376558_-|rifampin-monooxygenase
MFDVIVVGGGPTGLMLAGELRLHGVRVLVLEKETEPTRQSRAQGLHVRSIEVMAQRGLLERFLERGHTVAVGGFFAGLATSWPERLDTAHSYVLAVPQVITEQLLAEHATALGAEIRRGRALVGLRQDEDGVTVDLADGEQLRARYVVGCDGGRSTVRKLLGVAFPGEPSRVETLLGEMEMTASQEELTSVMTEVRKIQQRFGAMPLGDGVFRVVVPAEGVAEDRTAAPTLDEFKQQLRAHAGTDFGVHSPRWLSRFGDATRQAERYRVDRVFLAGDAAHIHPPTGGQGLNLGIQDAFNLGWKLAAEVDGWAPEGLLDTYHAERHPVATEVLDNTRAQIQLMSTEPGPQAVRRLMAELVEFENVNRYLIEKITAISVRYDVGEGHELLGRRMRDLALKHGRLYERMHEGRGLLLDQTGRLSVAGWEDRVDHVVEVSEELDVPAVLLRPDGHVVWAGEDQQELLTRLPAWFGAATAG
>NZ_CP029195.1|WP_150507784.1|7383334_7383694_-|hypothetical-protein
MRDDDPWDTIRSLAALFTEFDAGRGLEPEEQWTMQVLKLTEEVGEAAQAVIGARASNPRKGRSHSWEQVQEEVVDAVVTGMVALTRMRPDDAPEFFAAVLARKAAKFLPHDDGPVVTSR
>NZ_CP029195.1|WP_150507785.1|7385146_7385848_-|response-regulator
MTEQPPRILLADDQTLVRTGFRMILGADGIDVVAEATNGAEAVEAVRRTRPDVVLMDVRMPEMDGLEATRRILTGAPDQPRVIILTTFDLDRYVYAALSAGASGFLLKDVTPEHLTAAVRTVRTGDALLAPAITRRLVQRFTQRGSDTAALHRDLASLTPRELEVLSLLARGLSNAELATRLHLAEATVKTHVARILAKLGLRDRVQAVIVAYETGLVSVGPGEAAQQSTEQT
>NZ_CP029195.1|WP_150507786.1|7385844_7387155_-|sensor-histidine-kinase
MNVRTMLERLRAAGREAVRDARRPTGPPLRLSRRAWQFDVLVALTLGIATVHYGIDNTDVVVVREIAPGVNHVMPRPSGPGGMAFMVTLAVIASGALALRRRFPLAVLCVVTAAVLATPQSVMRLTFYAFVIAVYSAAVHSPYRVATLAALPVSVLLVGTSGNSVTPIIPNEYIALLILVPMAGAALGLRTWKLRTDEGRTRLSALEREQAEALRRAVEHERARIARELHDVVTHNVSVMVIQAGAARKIMKTSPEQAGEALLAVEAGGRAAMTELRHVMGLLTMADEGEGTDEDPDVTGTAAELAPQPGLDQLESLVGRVRDAGLTVDVTVTGPPRPLPPGLELAAYRVVQEALTNTVKHASGSTAAVTVEYGPDRLRVEVTDTGGHPGADAAAGNGRGLIGLRERLAVYDGTLHAGRRLTGGYRVEALIPLEAP
>NZ_CP029195.1|WP_030208591.1|7387382_7388090_+|ABC-transporter-ATP-binding-protein
MTTPVIELREVSRRYNDGPPALHEASLTVRPGEAVAVLGPSGSGKSTLLNLVAGLDRPDAGSVTVEGVRVDRLGEAGAARYRRSKIGMVFQFFNLLDDLTVTDNVVLPARLAGMARGEADRRAAQLLETLGIDRHARAYPGRLSGGERQRVAVARALMNRPPLLLADEPTGALDTAAGQDVSKLLTDLNSEGQTIVVVTHDLALARSCTNRTVRIADGRITEDLMSPAVAPEAVR
>NZ_CP029195.1|WP_150507787.1|7388086_7390435_+|FtsX-like-permease-family-protein
MSALGKVVRSGVGRRRVQTLVIGLATMMAVAASVLGGSLLVVSGAPFADAFAEQRGAHLSVEFDAGQVSAGRLSESADTEGVSSAAGPFRTATVAPTSDGAGSGWPMTVVGRGDPGRDVDEVALLDGRWPTRSGEIVLSAGSSLIPTLGTKLTFPGLSGGPTLTVVGVARSVTQTADAWVVPSQMPALTAPGSGGYQMLYRFTDAATAGQITAGAKAVTKDLPTGAAVGKQSWLTVKKNAERDTALYVPFLIAFGALGLVMSVLIVGNIVAAAVGAGTRRIGILKAIGFTPAQVVRAYVGQALIPAAVGTALGVLAGHLLAVPVLAETEEVYGSSSLTIAPWVDAAVIGGVLGLVAATAWASAWRAGRLRTVDALAVGRGTSMRRGRWAARLAGRLPLPQPVALGLARPFARPARALAMGTAVLFGTIAVTFTVGMVASLGEVMKAKAHDVADVTVPAPMPDFGPQSPASQKKPRADPAAVAAAIEAGAGTAKHYSAATVRATVSGVTGTVDVIAFTGDASWGGYTMVSGRWTDKPGEAVVPTPFLAATGTRIGDTVTVNGLDRPVTVRIVGEVLDPRNDGMQVFTDAKSLAGAHPDLTETSHHIAVASGTDVTGYVDALNKDLAPLGATAQAGGLGRGSDMVVTLNSLSAILTLMLVAVAALGVLNGVLLDTRERVREIGVHKALGMTPRQTVAMVLTSVVVTGLVAGALGVPLGVTLHGWVFPAMGDSAGLRLPDSVIAVYHGAELFPLALGGLLIATLGALLPAGWAARARTATALRTE
>NZ_CP029195.1|WP_150507788.1|7390588_7391083_-|hypothetical-protein
MARLTEESKTRNEAAIRAAMERILSGNLPPWGKADLKTLATLARVTRTGFYPKSNRDGSTRRGAYQHLAEEFERRLREFRDAGEILDPRVAQIDRLKKENAELRKRIGARDEQLAELTDSKSLAISQLATQHDEIERLRKQVAANHNVRPLPAPSRAVPFGSCS
>NZ_CP029195.1|WP_150507789.1|7391084_7392764_-|integrase
MAHVKILKLIAQYGELLSGDGYAAGFAPWKGKTATQVIGYKSKGPNLTPPVPDSMLQPLLATCLHLVNEVGPHLADLMETARAGRAALPTSGGVTLTQLPVLRQVLERMRTSGEPLPAVDDVQLRKRTTLGEEGPLKCLGWEALARTVAARRFGDDARQSLIPELTALAAEVGFQPPLARQAVPIPRVVDGELVPWTLPLADRDLVFMFDHAMTACLVVTCALSGMRTSELLEIEAGSRLPTVTMPGGGRRFRLASRLLKGQKFGGVPDEWVVIEQVDRAVALAERLVPRTAGEALFGTIDLAGRLKNLRGWLERTGNGERWGLPVIPQGPLNARTLRRTLSLAIAERPGGLLAAKVALKHISVATTEGYAARPGGSQRLFHAEIEEAEETHHVRLTVEAFRDVQAGRMPAGPGARSLIEAFHHVDAQLKDAARTDPKILKDDRHLEGLLRKQAKTLHVGPANFCWFRGPSKALCLRLAGTPDATKPLVGMCDSARCPQAAHHPCHRPVWAGQATAIDVFIESPRVAKGEKARLTPERDRALRVVAEIDAAQTASIGDD
>NZ_CP029195.1|WP_150507790.1|7392911_7393124_-|hypothetical-protein
MFSGLVDAHRMMSEREQIWDFTEIINPRWRVVAKEILLAMLAPQYEAVLECAHALRTARSPRTLYGFLEK
>NZ_CP029195.1|WP_150507791.1|7393261_7393939_-|hypothetical-protein
MDDAGKPLVIHRGRIRATYHERLARRGWTGRATIDPNHTARTEGDHYVTPTSPAQLDAVESIIEDGQADVLRKALPPVVLSAEQAVRFAEDFPDEVNRLELDAEAIAELVGGERDVFTAACADQLAGVHGPAGQPCPARPWVCLLCPLAVFLPRHAANLPRLNAFFARQFRQMPPENFVRVFGPYADRLANEILPELSEGAKMKAAPEVADDDTDLPLRPEEGTL
>NZ_CP029195.1|WP_150507792.1|7394209_7395715_-|hypothetical-protein
MLFPLSHAITKGQKARTSWISYEALAEVHQYIELDRAASTEGFRWRPPSKLGVPLIVEQPDWEGAFLNGERRSWRKLRPAERLRLVTPEGGSALVGLQSSGKPFVDWATVFRRTSARIRERFEPRFPTVAPHRLRHSMAMATLEWLVTGYYQRAAALAAGSGDDAAMALYLTRNDPMLILRDLLGHQSVPSTELYIARLDVTRIYRDANKDTTGAPDTGASRRSRGRVRRRGGRLMPAYVIDEPLAVHFVFPNGREWTCALDDLPNPGLALDLARGLAANAHPEGGIGAKNTVKTYGVALRKMVRALSEAGFTGTASDLTRATLVRYWMAGTHTAERETRMLLKGFDRVKGALRPEVRAYLLGNQIQAYRSRGSYQAYTDGEWDRLEAGCRAVVDDSWGRHRRAQALAARGAEPSADAEHSPQDIAWLLLRDGPFPDRPGYRAQAQARSARSPQWDLRRAVRQMRSDLFPHPVVQVAYSVLFGMYCGVVPDGIDDLKLDGL

Crispr_ID: NZ_CP029195_16

• CRISPR_ID: NZ_CP029195_16
• CRISPR_location: 7545935-7546312
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 8 spacers

Consensus repeat of NZ_CP029195_16

Consensus_repeat	Method
CGGCTCCCGTACGGCGTCGGG	CRT

spacers of NZ_CP029195_16

>16.1|7545956|42|NZ_CP029195|CRT
CCCGGGCGCGGATTCCGGTGCGGTCGGTTCCGGCACGGCCAG
>16.2|7546019|21|NZ_CP029195|CRT
GGGAGGTTCCGGCGGGGTGAC
>16.3|7546061|21|NZ_CP029195|CRT
GGGAGGTTCCGGCGGGGTGAT
>16.4|7546103|21|NZ_CP029195|CRT
GGGAGGTTCCGGCGGGGTGAT
>16.5|7546145|21|NZ_CP029195|CRT
CGCCGGGTCCGGGGCTACGAC
>16.6|7546187|21|NZ_CP029195|CRT
GGAAGGTTCTGGTGGGGCGAT
>16.7|7546229|21|NZ_CP029195|CRT
CGCCGGGTCCGGGGCTACGAC
>16.8|7546271|21|NZ_CP029195|CRT
GGAAGGTTCTGGTGGGGCGAT

CRISPR arrays and Neighbor proteins around NZ_CP029195_16

CRISPR arrays

The CRISPR arrays of NZ_CP029195_16

>merge|NZ_CP029195|16|7545935-7546312|CRT
GGCCTCCGGTACGACGACGGGCCCGGGCGCGGATTCCGGTGCGGTCGGTTCCGGCACGGCCAGGGGCTCGCGTACGGCGTCGGCGGGAGGTTCCGGCGGGGTGACCGGCTCCCGCAGGGCGTCGGGGGGAGGTTCCGGCGGGGTGATCGGCTCCCGTACGGCGTCGGGGGGAGGTTCCGGCGGGGTGATCGGCTCCCGTACGGCGTCGGGCGCCGGGTCCGGGGCTACGACCGGCTCCCGTACGGCGTCGGGGGAAGGTTCTGGTGGGGCGATCGGCTCCCGTACGGCGTCGGGCGCCGGGTCCGGGGCTACGACCGGCTCCCGTACGGCGTCGGGGGAAGGTTCTGGTGGGGCGATCGGCTCCCGTACGGCGTCGGG

>NZ_CP029195|16|2|7545935-7546312|CRT
GGCCTCCGGTACGACGACGGG	CCCGGGCGCGGATTCCGGTGCGGTCGGTTCCGGCACGGCCAG
GGGCTCGCGTACGGCGTCGGC	GGGAGGTTCCGGCGGGGTGAC
CGGCTCCCGCAGGGCGTCGGG	GGGAGGTTCCGGCGGGGTGAT
CGGCTCCCGTACGGCGTCGGG	GGGAGGTTCCGGCGGGGTGAT
CGGCTCCCGTACGGCGTCGGG	CGCCGGGTCCGGGGCTACGAC
CGGCTCCCGTACGGCGTCGGG	GGAAGGTTCTGGTGGGGCGAT
CGGCTCCCGTACGGCGTCGGG	CGCCGGGTCCGGGGCTACGAC
CGGCTCCCGTACGGCGTCGGG	GGAAGGTTCTGGTGGGGCGAT
CGGCTCCCGTACGGCGTCGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP029195.1|WP_150507890.1|7549331_7550033_+|ThuA-domain-containing-protein	unknown	unknown	gnl|CDD|377643
NZ_CP029195.1|WP_150158646.1|7558412_7558676_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507887.1|7546757_7547402_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP029195.1|WP_150507889.1|7548358_7549207_-|DUF3626-domain-containing-protein	unknown	unknown	gnl|CDD|372019
NZ_CP029195.1|WP_150507893.1|7555034_7558385_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|226418
NZ_CP029195.1|WP_150508514.1|7538601_7539795_-|hypothetical-protein	unknown	unknown	gnl|CDD|371045
NZ_CP029195.1|WP_150507881.1|7536459_7536963_-|FBP-domain-containing-protein	unknown	unknown	gnl|CDD|379860
NZ_CP029195.1|WP_150507888.1|7547441_7548248_-|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl|CDD|235743
NZ_CP029195.1|WP_150507884.1|7541957_7542941_-|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP029195.1|WP_150507892.1|7552801_7554886_-|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NZ_CP029195.1|WP_150507883.1|7540198_7541569_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP029195.1|WP_150507878.1|7532438_7533029_-|exonuclease-domain-containing-protein	unknown	unknown	gnl|CDD|99836
NZ_CP029195.1|WP_150507891.1|7550231_7551629_+|NADP-dependent-succinic-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|181826
NZ_CP029195.1|WP_150507880.1|7535232_7536429_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173840
NZ_CP029195.1|WP_015031546.1|7533152_7533824_-|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224715
NZ_CP029195.1|WP_150507885.1|7542940_7543831_-|hypothetical-protein	unknown	unknown	gnl|CDD|237865
NZ_CP029195.1|WP_150507879.1|7533905_7535096_-|CoA-transferase	unknown	unknown	gnl|CDD|367110
NZ_CP029195.1|WP_015031529.1|7551734_7552760_-|PHP-domain-containing-protein	unknown	unknown	gnl|CDD|236135
NZ_CP029195.1|WP_150507882.1|7537032_7538502_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|224089
NZ_CP029195.1|WP_150507894.1|7558721_7559579_-|siderophore-interacting-protein	unknown	unknown	gnl|CDD|99790

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP029195.1|WP_150507890.1|7549331_7550033_+|ThuA-domain-containing-protein	gnl|CDD|377643	pfam06283, ThuA, Trehalose utilisation. This family consists of several bacterial ThuA like proteins. ThuA appears to be involved in utilisation of trehalose. The thuA and thuB genes form part of the trehalose/sucrose transport operon thuEFGKAB, which is located on the pSymB megaplasmid. The thuA and thuB genes are induced in vitro by trehalose but not by sucrose and the extent of its induction depends on the concentration of trehalose available in the medium.	7.33251e-88
NZ_CP029195.1|WP_150507887.1|7546757_7547402_+|TetR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.44654e-13
NZ_CP029195.1|WP_150507889.1|7548358_7549207_-|DUF3626-domain-containing-protein	gnl|CDD|372019	pfam12294, DUF3626, Protein of unknown function (DUF3626). This family of proteins is found in bacteria. Proteins in this family are typically between 294 and 374 amino acids in length.	2.06927e-69
NZ_CP029195.1|WP_150507893.1|7555034_7558385_+|AAA-family-ATPase	gnl|CDD|226418	COG3903, COG3903, Predicted ATPase [General function prediction only].	1.65215e-53
NZ_CP029195.1|WP_150508514.1|7538601_7539795_-|hypothetical-protein	gnl|CDD|371045	pfam10428, SOG2, RAM signalling pathway protein. SOG2 proteins in Saccharomyces cerevisiae are involved in cell separation and cytokinesis.	6.76039e-08
NZ_CP029195.1|WP_150507881.1|7536459_7536963_-|FBP-domain-containing-protein	gnl|CDD|379860	pfam16571, FBP_C, FBP C-terminal treble-clef zinc-finger. FBP_C is a family from the C terminal end of fibronectin-binding proteins. It forms an extended four-cysteine zinc-finger with a unique structural fold. Fibronectin-binding proteins bind to elongation factor G - EF-G, which is mediated by the zinc-finger binding to the C-terminus of EF-G. FBPs release ribosomes by competing with them for EF-G.	5.32634e-85
NZ_CP029195.1|WP_150507888.1|7547441_7548248_-|class-II-aldolase/adducin-family-protein	gnl|CDD|235743	PRK06208, PRK06208, class II aldolase/adducin family protein.	2.31646e-155
NZ_CP029195.1|WP_150507884.1|7541957_7542941_-|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.17315e-112
NZ_CP029195.1|WP_150507892.1|7552801_7554886_-|SpoIIE-family-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	7.1555e-47
NZ_CP029195.1|WP_150507878.1|7532438_7533029_-|exonuclease-domain-containing-protein	gnl|CDD|99836	cd06133, ERI-1_3'hExo_like, DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins. This subfamily is composed of Caenorhabditis elegans ERI-1, human 3' exonuclease (3'hExo), Drosophila exonuclease snipper (snp), and similar proteins from eukaryotes and bacteria. These are DEDDh-type DnaQ-like 3'-5' exonucleases containing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. ERI-1 has been implicated in the degradation of small interfering RNAs (RNAi). 3'hExo participates in the degradation of histone mRNAs. Snp is a non-essential exonuclease that efficiently degrades structured RNA and DNA substrates as long as there is a minimum of 2 nucleotides in the 3' overhang to initiate degradation. Snp is not a functional homolog of either ERI-1 or 3'hExo.	1.59888e-60
NZ_CP029195.1|WP_150507891.1|7550231_7551629_+|NADP-dependent-succinic-semialdehyde-dehydrogenase	gnl|CDD|181826	PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed.	0
NZ_CP029195.1|WP_150507880.1|7535232_7536429_+|acyl-CoA-dehydrogenase	gnl|CDD|173840	cd01151, GCD, Glutaryl-CoA dehydrogenase. Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.	0
NZ_CP029195.1|WP_015031546.1|7533152_7533824_-|GntR-family-transcriptional-regulator	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.14716e-46
NZ_CP029195.1|WP_150507885.1|7542940_7543831_-|hypothetical-protein	gnl|CDD|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	2.33028e-09
NZ_CP029195.1|WP_150507879.1|7533905_7535096_-|CoA-transferase	gnl|CDD|367110	pfam02515, CoA_transf_3, CoA-transferase family III. CoA-transferases are found in organisms from all lines of descent. Most of these enzymes belong to two well-known enzyme families, but recent work on unusual biochemical pathways of anaerobic bacteria has revealed the existence of a third family of CoA-transferases. The members of this enzyme family differ in sequence and reaction mechanism from CoA-transferases of the other families. Currently known enzymes of the new family are a formyl-CoA: oxalate CoA-transferase, a succinyl-CoA: (R)-benzylsuccinate CoA-transferase, an (E)-cinnamoyl-CoA: (R)-phenyllactate CoA-transferase, and a butyrobetainyl-CoA: (R)-carnitine CoA-transferase. In addition, a large number of proteins of unknown or differently annotated function from Bacteria, Archaea and Eukarya apparently belong to this enzyme family. Properties and reaction mechanisms of the CoA-transferases of family III are described and compared to those of the previously known CoA-transferases.	3.21085e-150
NZ_CP029195.1|WP_015031529.1|7551734_7552760_-|PHP-domain-containing-protein	gnl|CDD|236135	PRK07945, PRK07945, PHP domain-containing protein.	0
NZ_CP029195.1|WP_150507882.1|7537032_7538502_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.95856e-86
NZ_CP029195.1|WP_150507894.1|7558721_7559579_-|siderophore-interacting-protein	gnl|CDD|99790	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family. Siderophores are produced in various bacteria (and some plants) to extract iron from hosts. Binding constants are high, so iron can be pilfered from transferrin and lactoferrin for bacterial uptake, contributing to pathogen virulence. Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport mechanism of photosystem I. FNR transfers electrons from reduced ferredoxin to FAD (forming FADH2 via a semiquinone intermediate) and then transfers a hydride ion to convert NADP+ to NADPH. FNR has since been shown to utilize a variety of electron acceptors and donors and has a variety of physiological functions including nitrogen assimilation, dinitrogen fixation, steroid hydroxylation, fatty acid metabolism, oxygenase activity, and methane assimilation in a variety of organisms. FNR has an NAD(P)-binding sub-domain of the alpha/beta class and a discrete (usually N-terminal) flavin sub-domain which vary in orientation with respect to the NAD(P) binding domain. The N-terminal moeity may contain a flavin prosthetic group (as in flavoenzymes) or use flavin as a substrate. Because flavins such as FAD can exist in oxidized, semiquinone (one-electron reduced), or fully reduced hydroquinone forms, FNR can interact with one and two electron carriers. FNR has a strong preference for NADP(H) vs NAD(H).	5.58333e-81

Protein sequences

>NZ_CP029195.1|WP_150507885.1|7542940_7543831_-|hypothetical-protein
MSVPVSEYVPDFRPTHVVPRSGLDAWEAPDPGLPTTPLDAFLPVRLEERAGDWGRILCSNGWTAWVDARRLVTVPDDPPAAGGPLTRTADPRPLIARAEDALGRYRRAAEALGAGRLDGENFRLRTRGLRVGMVVDGESVWLYDAEHERWVYCDGVGLSTYAAGSSPSVAAAAVPGAGAGAGADAGERAPGTGRAPGKGAAGGEGHPGLPPVHEPTQVVAQIDSVPVSAAPPAPPAPPAPPAPPAPTQVVPRADDHAAEPPEAPPTQEVPRAEPPAAPAPPPTQVVKSPPGTAGED
>NZ_CP029195.1|WP_150507884.1|7541957_7542941_-|protein-kinase
MAGGPGDDPELPAGRPSGLIGKEIAGYRVEGEIGRGGMAVVYRALDLRLDRTVALKLLAPELARNDTFRKRFAHESRVAASIDHPHIVPVFEAGETEGVLYIAMRYVAGQDLVALLDREGPLPPVKAGRIAVQVASALDAAHAHDLVHRDVKPGNILVAEGTDRDHPEHVYLTDFGLTKKSLSLTGFTTVGEFVGTLDYVAPEQISGKPVDGRCDVYSLACVVFETLVGAPPFRRDTDWAVLWAQQYDPPPPLSEVRPGLPDAADAVFAKALAKSPEERYGTCLEFVAALRAALTGGGARPDVPRGPEPLGPPRDPPSWARPVFRAL
>NZ_CP029195.1|WP_150507883.1|7540198_7541569_+|hypothetical-protein
MVSVSSRLPTSTRPAATPTGLLVRVAVQALAAVVAGYVAMGLTAGLGLWAAGAADLPGGFTAVLAAVVVMAVGGKVELAGDAGSLAGTQAELTAMPLTVTLVGALVTGFCFLRPLRHHAVTSSRELLARAGGTVVLWLAALAGLSALARHDFRITIGGGEDQGSLTDIFGELLDAVNPTVGFRTDVGPTLFYGLLWILGVIVVALLVSRSTPLPARLVRYQEPVRPAAHAMLLLLLAYVALGLVIGVVVAATKGHAAETLAVLLLGLPNITWLALGVGIGGSWEGVAEGPFGLPMPQVLDAVLRQGDGSGDTPDLSTIDLGSLAAQDGRAWWLLPIAAVLVLAAAFAAAVRSPARTRLWQHALRLGVAFALTMLVVTPITLVEARFGLSVLGIGELESLGGQVILRPHIWATAGLALVWGLFFGFLGGLLASRVHRKGEIEQPKRPPSPEGPRSER
>NZ_CP029195.1|WP_150508514.1|7538601_7539795_-|hypothetical-protein
MVAAAALAVVLTNRSDDGGGSTGSGGEVFLQNAAASGPDPFTPSTARADTASASPASLPPRTASATPEVSGSTPGLYGGTQSVASCDVEQQVRFLSAEPAKNNAFAAVLGISGNEVPGYLRSLTPLQLRADTRVTNHGFRDGSATTFQAVLQSGTAVLVDDRGVPKVRCACGNPLTGPVAQKAPRTTGTAWQGYSSNQVVVVAPSVTVVNVFVVYDPKDDSWFARQHGDHGRHDRPTPPPPPPTKTPSKSPSTSASTSVSPSSPVPCVTVTGTETPTPSGGVTPSPCPVTLSPSASTTSPSTSSPPPSSPSTETSPSDTPPSTDTSPSTESSGPESAPVTESSSVLSPGGSTTASSPANLAPLTPSGSGSTSPSVPAPGPGAALRSAPALPGLAPVA
>NZ_CP029195.1|WP_150507882.1|7537032_7538502_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MAVARVVATADRTLTGRQLASLLTPPPEGRFGYRELARAVREALLDGRVALRLRLPAERELATVLAVSRTTVTGAYDLLRESGYAHSRRGAGTWTALPENQAPTALGAFHGDAGAAVDLALAAPEAPADELAAALTSAAAELPRYAGSQGYHPYGLPVLRAAVAARYTARGLPTLPEQILVTTGAQQALSLVLTLLGRPGDRVLAENPSYPNALDAMRGRMLRVTPVPVTEAGWDTGLVDAALRQTAPRMAYLIPDFHNPTGRLMPQEQRRELARAARATGTWLVVDETLTDIALDVPAPLPFAATAAGGDGEQIVSVGSLSKSCWGGLRVGWVRAASPVVTELARVRITADLAGSVLDQLVAVALMDRLDVILPRRIAQLRRRRDALATALARHLPQWRWETPPGGLCLWIDLGRPAASVLAARGTRHGARVEGGARFGVDPGTHEHRLRIPYTLPEDAYETAAERLAAALDGAPGRFTDPALPDWVA
>NZ_CP029195.1|WP_150507881.1|7536459_7536963_-|FBP-domain-containing-protein
MEPLTDKQIRSSFVNSTKGEAARLKLPLDFAELPWEDLDFLGWVDPGAPLRAHLVVPRADGPVGVSLRVPASGRTSAMKSSMCQVCLTGHASSGVTLLVAPLAGARGREGNTVGIYLCADLACSLYVRGKRQPKLRGRRHEESLTLDEQVARLTGNLDAFVDRVTSG
>NZ_CP029195.1|WP_150507880.1|7535232_7536429_+|acyl-CoA-dehydrogenase
MKSQSSQSSTSPVHPFDLLAVDGLLTDEEREIRGTVRAVADRELRPHVAGWFEKGEIPARELARTLGSVGVLGMHLEGYGCAGTNAVAYGLACLELEAVDSGLRSLVSVQGSLAMYAIWKYGSEEQKQRWLPKMAAGEYIGCFGLTEPDAGSDPGAMRTNAKRDGSDWILNGTKMWITNGSVADVAVVWARTEDGVRGFLVPAGTPGFSAPEIKMKLSLRASVTSELVLEDVRLPADAMLPEARGLSGPLGCLNEARFGIVFGALGAARDCLETAVSYARDRTVFARSLASYQLTQQKLADMAVELGKGMLLALHLGRLKDVGALTAEQISVGKLNNVREAIAIARECRTILGANGITLEYPVLRHANNLESVLTYEGTSEVHSLVIGKALTGEQAFR
>NZ_CP029195.1|WP_150507879.1|7533905_7535096_-|CoA-transferase
MRTDQPDTPPTGALSGIVVADFGRVLAGPYMTMLLADLGADVIKIERPGSGDDTRAWGPPFAGGEATYFLGVNRNKRSVTLDLTDPGDLAAARAIVDRADVLVENFRPGTMEKLGLGYEDVRSGNPGLVYCSVTGFGTGEGARLPGYDLLVQAMGGLMSVTGEPDGEGTKAGVALVDVITGLHAGLGVLAALRHRERTGEGQRVEVSLLSSLLSALTNQASAHLGSGVVPRAMGNRHPSIAPYEVFEAADRPMVLAVGNDRQFRALCERLGLPGLAGDARFATNTARVAHREELRAALAGPLAARTADGWFEELTAAGVPCGPINDLAAAFGLADRLGLAPRVPESAAGPGQVAHPIRLGATPAAYRTAPPGLGEHTDELLASLGRAATGTITRTP
>NZ_CP029195.1|WP_015031546.1|7533152_7533824_-|GntR-family-transcriptional-regulator
MSSAVQKRRPQTAQQFVLEELRRAITSGELRPGGQIRQDALAARFEVSRVPLREALKALEAEGLVVHHIHRGYFVAELSLADLEEIYRIRELLETEAVRLAVRRLPDGIVATLEGIQREVERAAEEGDVTAMAAANRLFHFTLIEASGMPRLVRLITTLWDSTDAYRALYYAEDPHRKQAVREHRAVISSLRQGDEEATVRWLDEHRAHAVAALREVLDLERD
>NZ_CP029195.1|WP_150507878.1|7532438_7533029_-|exonuclease-domain-containing-protein
MMHGGLVNIVDVEATCWDGERPPGAVSEIIEIGLTVVDLAAGERLSRHRILVRPARSRVSAFCTELTGLTQAEVDTGLDFAAACRLLVTTYEAGSRPWASWGDYDRKQFALQCRATGAPYPFGHRHTNAKAVFTEAFGLRRRPGMAQALEIAGLPLEGRHHRGEDDAWNIAALVLLVAGRDAWPEAAAGTGPGTAP
>NZ_CP029195.1|WP_150507887.1|7546757_7547402_+|TetR-family-transcriptional-regulator
MPKGVTRRRPRTRAALLKAALETFAEHGFHATTIEQICERAGYTRGAYYSNFASKEELFLALFDEHSDRTVRRLAEAIDALTAEEYTLTRLAELAARVEPDERDWYLVTTEFTLHAIRDPQAAWVLARHDERLRAEIARGLTLVLRRAGRELTVDADRFARLLIALREGGLAQSYVEPAELPPGSLERQFLAPLLEASTREVPAEGDAPPAGRG
>NZ_CP029195.1|WP_150507888.1|7547441_7548248_-|class-II-aldolase/adducin-family-protein
MSTVPPALAAAVGPLPDGAVLPLPPTFDSVEEERRYRKEQLAAGFRIFGRFGFSEGVAGHITVRDPGDPNAFWVNPFGMSFGQIKASDLILVDHEGTVLEGRRPVNRAAFVIHSRVHAARPDAVAAAHSHSLHGKAFSSLGIPLDPITQDACAFFEDHGIYADYRGVVNETEEGERVAKALGDHKAVILKNHGLLTVGHSVAEAVWWFVTMERSCQAQLLAMAAGTPQHIDRETALLTRGQIGGHLAGWFQARPLWDQITASDPDLFD
>NZ_CP029195.1|WP_150507889.1|7548358_7549207_-|DUF3626-domain-containing-protein
MTEIDTHARAAHPDVHAHAARALAHVAARSAGEPLDPSLRVTLNFHPHFLHLLAEEGVYRSQFVTGTSNGGLTARPGGDRWRWESRIFGGAYDEAPADARPVYGALDFRRRPFGAAPRFGSAHLRLTAAALDRSTFCYPDSFLEPADFGVASRMGLVALAEADEQDLLDDYVEAQIHGPLLIGRDVEALVLDPSHRGTEVEAAARRLPCPVEWHGGFRLSVAELRRHPEFRGPEYVELGARIAVDGWLDPRIVQEAAGSGAYDPQDVKRVWHYLARFGAPAA
>NZ_CP029195.1|WP_150507890.1|7549331_7550033_+|ThuA-domain-containing-protein
MPTADVLIYTRTAGYRHDSIPDGATALTELARDLGRAAEATEDPGVFTPDRLAGCAAVVLLSTTGNVLTPEGRSAFEAYLRGGGALLAVHAAANAEPDWPFYGELLGTRFDGHPEIQPGVVLVDGHDHPATAPLPARWAWTDEWYNFTSDPRGTDRRGTGSPGASESGGVRVLARADESTYRGGTHGDDHPLVWCREIDRGRMFFTALGHASETYRDPAFRAHLSGALSWLTS
>NZ_CP029195.1|WP_150507891.1|7550231_7551629_+|NADP-dependent-succinic-semialdehyde-dehydrogenase
MGIATVNPATGETLRVYEAHGPEEVERRIAAAHEAYRQYRTTSFAERARLMRAAATLLDEDTEDIARTMTVEMGKPIAAARAEAGKCAKTMRWYARNAEELLADEHPAESDVQDSGADVARVHYRPLGPILAVMPWNFPLWQVIRFAAPALMAGNTGLLKHASNVPRTALYLGDLFRRAGFPEGCFQALLIGSRDVERVLRDPRVVAATLTGSEPAGRAVASVAGDEVKKTVLELGGSDPFIVMPSADIVGAVKTAVTARVQNNGQSCIAAKRFIVHQDVYDDFSERFTAAMNALTVGDPLDESTDVGPLATEQGRTDIEALVDDAVRRGATALCGGRRPEEPALRDGWYYRPTVLTGITPEMRIHHEEAFGPVATVYPVRDIEEAVAVANDSPFGLSSTVWTRSPEDVAFFVRDLEAGGVFVNGMTASHPALPFGGIKRSGYGRELSGHGIREFCNATTVWQRT
>NZ_CP029195.1|WP_015031529.1|7551734_7552760_-|PHP-domain-containing-protein
MDPVAALNRIAFLLERAQAPGYRARAFRTAAAAVGALPEGEAARRAAAGTLEAVKGLGPKTAAVVREALDGRVPEYLAGLEAELEESLRTDGTTGGGEALRAALRGDCHLHSDWSDGGATIEDMGRAAAGLGHEWAVLTDHSPRLTVARGLSPERLREQLDVVARLNEEWAPFRLLTGIECDILEDGSLDQEPELLDRLDLVVGSVHSKLRMDARAMTRRLERAVRNPLMDVLGHCTGRLVAGGRLRPESEFDAERVFAACAESGTAVEINSRPERLDPPRRLLRLAVAAGTYFAVDTDAHAPGQLEWQIIGCARAEECGVPEERVVNTWPADRLLEWTGA
>NZ_CP029195.1|WP_150507892.1|7552801_7554886_-|SpoIIE-family-protein-phosphatase
MTDEDRHTRNGEIGPAEWLAMNRTGSFDWDLDTGTIDVDEAGLLVFGLVPDAYDGRPVSLIARLAPEERARLEAVVRQAVTSGEVSYTAHFPIPQADGSPHWTHVQARILRSPDGRARRIVGVVRDTTAELTRFAFVQELEKRREVQTNIVERTTNALSRAVTVDDVTAALTGPGGLARLGADGLALGLVENGSLNIIALSGESLDVLNDLRIRRLDRGLPLAEAVLSGRPRFVSSFASLGRDFPELVPYLASLDFRAACYLPLVAQARSLGGMALFYRGRTSFNADERNLALGLAAIVAQSLQRAILFDEERELATGLQATMLPRRIPRITGGEIAVRYHAAWSGRQVGGDWYDVIALPRGRVGIVVGDVQGHDTHAAAIMGQLRIALRAYAGEGHAPSTVLARASRFLAELDTNRFATCTYAQVDLGSGTLRAVRAGHLGPLIRHTDGRVGQPKLRGGLPLGLATVFGDEEFPETRLDLVPGETLVLCTDGLVEQPGSDIETGLTALSEAISSGPPQAEALADHLSERLWERWGSGDDVALLVLRRSPDPGTPRAPRIHQYIHQADPQGLSDARAAVGQALRDWGMTELADDAELLTGELLVNVLLHTEGGAVLTLEVLPEPVRRVRLSVQDRSSAWPRRRTPGEAATSGRGLLLLDALASRWGVEPRGEGKAVWCEIGPAPVPADSTANGA
>NZ_CP029195.1|WP_150507893.1|7555034_7558385_+|AAA-family-ATPase
MRGGGPAGQNGPVQPPYRVLGPCQALRTDDGTEAALRGARLRALFTALAAAGGRGVGTGALIDQVWADADPADEHDQDRTAALQALVGRLRRALGREAVAAAPGGYRLAGDADAVDLYRFERLASEGAAALAAGDPARAAALLDEALGLWRGPALADLPGRDTDPLVVRLDQRHTQARRDRFAADLALGRAAEALAPLAALAAVHPLDEPLQALRIRALRAAGRPSEALAAYERVRTGLADRLGTDPGPELRALHAELLTDGAAAPTEVPAKPRPAALPARLTSFIGRDDELGALAADWDALRLVTLTGPGGVGKTRLALEAAETYKDGPVHLAELASVREESTVAAAVLSAVGARGTHVWHRASAAEGDRDDPFAELVEHCAGRRMLLVLDNCEHVVATAAALTQALLTRCPGVTVLATSREPLGVPGEVVRPLGPLPLGMALRLLGERGGAARPGFSVGEDRGAAEEVCRRLDGLPLAIELAAARLRLLSVRQIADRLDDRFRLLRSGARTVLPRQQTLRAVVDWSWELLEDSERAVLRRFAVFTGGADLAAAEAVCGDGAGAGLDVLDVLGALVDKSLVVAGVGRDGEETRFRLLETVAEYAGERLAESGERAATERRHLTYYRELARRTDPELRGAGQVAAIARLEREHDNLRGALRTAVALGDEQEVLCLVHSLSWFWQLRNHQIDARTWAVEAGRLGPDPFRAPVRPAEPFDGRCTDVPPPWSGERLREARRGGRLYALATQGGRGSAAFERPETRARLTALVSAYRPGLPQVCRQPGSMWFFARLMTGELAGLDEALTAIVDACRDHGPGWDLAVALLIRAKLVVHGPEDATEALTLFEAAGDPWGIAESLAARGEAYERAGRLAEAAADFERATDAAARAGARSQVPLFTARLASVRLRLRPEGDPAAEELLARAAEEAGEWGAEGAGAARLLLAQHYGHTGRTGRARAQLARLEDEFGDVTPALFWGLVGGTWGWLDCLDGAYDRAVERIGKALVDVETLAHLVAPYLIVVQFATAAWALGGRGGPGDAETGARLLGAYDAHVASEPGGGFRPFTEVTESMIRTRAETTLRAALPPEAYTSRYDEGSGLDLRAAAALVHTAGEAPAR
>NZ_CP029195.1|WP_150158646.1|7558412_7558676_-|hypothetical-protein
MKPSQRARLLSVVCLVALVAFGWYATRSVRPPDCKVAVGAFTTADGQPIGDGGERVTWEELGESAYQDMVAAGTCEPPAARWRHWLG
>NZ_CP029195.1|WP_150507894.1|7558721_7559579_-|siderophore-interacting-protein
MSQPLPVPDALPLRLLRVTGVRRLTPRMRRVTLGGAALAGFSLGGPDQQVKLFFPRPGQAEPVLPVPGADGDVMRWYAAYSALPEAVRPWMRSYTLRAHDPAAGTVDIDFHLHGGDEGPATRWARAARPGDVVGMFGPSAAFAVPVDPGAGDWTLLYADACALPALATVVAALPPRHRALACVQVADAAELQPLPTAGDLTVRPLYEGASAVDALRAEPLPAGRPYVWLAGEASAVRGLRRHLVEERGVDRRSVHFTGYWRQSLTQDHAPTPEDLAEARERLAAG

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP029195_12	12.7|6314019|33|NZ_CP029195|CRT	6314019-6314051	33	NZ_CP029195.1	6314505-6314537	0	1.0
NZ_CP029195_15	15.1|7383186|25|NZ_CP029195|CRISPRCasFinder	7383186-7383210	25	NZ_CP029195.1	7383232-7383256	0	1.0
NZ_CP029195_12	12.4|6313884|18|NZ_CP029195|CRT	6313884-6313901	18	NZ_CP029195.1	3736656-3736673	1	0.944
NZ_CP029195_12	12.4|6313884|18|NZ_CP029195|CRT	6313884-6313901	18	NZ_CP029195.1	4831506-4831523	1	0.944
NZ_CP029195_12	12.4|6313884|18|NZ_CP029195|CRT	6313884-6313901	18	NZ_CP029195.1	5800487-5800504	1	0.944
NZ_CP029195_12	12.4|6313884|18|NZ_CP029195|CRT	6313884-6313901	18	NZ_CP029195.1	5308657-5308674	1	0.944
NZ_CP029195_12	12.4|6313884|18|NZ_CP029195|CRT	6313884-6313901	18	NZ_CP029195.1	5978614-5978631	1	0.944
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NZ_CP029195.1	6314556-6314579	1	0.958
NZ_CP029195_12	12.9|6314112|21|NZ_CP029195|CRT	6314112-6314132	21	NZ_CP029195.1	6314493-6314513	1	0.952
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_CP029195.1	6314298-6314330	2	0.939
NZ_CP029195_12	12.6|6313965|36|NZ_CP029195|CRT	6313965-6314000	36	NZ_CP029195.1	6314352-6314387	2	0.944
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NZ_CP029195.1	6313686-6313709	2	0.917
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NZ_CP029195.1	6314352-6314375	2	0.917

1. spacer 12.7|6314019|33|NZ_CP029195|CRT matches to position: 6314505-6314537, mismatch: 0, identity: 1.0

tccgtcgtccttccgccgtgacgaccggccctc	CRISPR spacer
tccgtcgtccttccgccgtgacgaccggccctc	Protospacer
*********************************

2. spacer 15.1|7383186|25|NZ_CP029195|CRISPRCasFinder matches to position: 7383232-7383256, mismatch: 0, identity: 1.0

ccggaccgcccgcgcgggtccgggg	CRISPR spacer
ccggaccgcccgcgcgggtccgggg	Protospacer
*************************

3. spacer 12.4|6313884|18|NZ_CP029195|CRT matches to position: 3736656-3736673, mismatch: 1, identity: 0.944

ccgcggtggtggcggtgg	CRISPR spacer
cctcggtggtggcggtgg	Protospacer
** ***************

4. spacer 12.4|6313884|18|NZ_CP029195|CRT matches to position: 4831506-4831523, mismatch: 1, identity: 0.944

ccgcggtggtggcggtgg	CRISPR spacer
ccggggtggtggcggtgg	Protospacer
*** **************

5. spacer 12.4|6313884|18|NZ_CP029195|CRT matches to position: 5800487-5800504, mismatch: 1, identity: 0.944

ccgcggtggtggcggtgg	CRISPR spacer
ccacggtggtggcggtgg	Protospacer
**.***************

6. spacer 12.4|6313884|18|NZ_CP029195|CRT matches to position: 5308657-5308674, mismatch: 1, identity: 0.944

ccgcggtggtggcggtgg	CRISPR spacer
ccgcggtggtgccggtgg	Protospacer
*********** ******

7. spacer 12.4|6313884|18|NZ_CP029195|CRT matches to position: 5978614-5978631, mismatch: 1, identity: 0.944

ccgcggtggtggcggtgg	CRISPR spacer
ccgcggtggtcgcggtgg	Protospacer
********** *******

8. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to position: 6314556-6314579, mismatch: 1, identity: 0.958

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacaaccgcggcggcgg	Protospacer
******************.*****

9. spacer 12.9|6314112|21|NZ_CP029195|CRT matches to position: 6314493-6314513, mismatch: 1, identity: 0.952

gcgtgacgagcgtccctcgtc	CRISPR spacer
gcgtgacgagcgtccgtcgtc	Protospacer
*************** *****

10. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to position: 6314298-6314330, mismatch: 2, identity: 0.939

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
ccgtggtggcgaccgtggtgggttccgtcggga	Protospacer
***************.**.**************

11. spacer 12.6|6313965|36|NZ_CP029195|CRT matches to position: 6314352-6314387, mismatch: 2, identity: 0.944

tggcggcgacaaccgtggcggcgggttccgccgcga	CRISPR spacer
tggtggcgacaaccgtggcggcgggttccgccgtga	Protospacer
***.*****************************.**

12. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to position: 6313686-6313709, mismatch: 2, identity: 0.917

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacaaccgcggcggtgg	Protospacer
******************.**.**

13. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to position: 6314352-6314375, mismatch: 2, identity: 0.917

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacaaccgtggcggcgg	Protospacer
***************.**.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP029195_16	16.5|7546145|21|NZ_CP029195|CRT	7546145-7546165	21	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	367218-367238	1	0.952
NZ_CP029195_16	16.7|7546229|21|NZ_CP029195|CRT	7546229-7546249	21	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	367218-367238	1	0.952
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	MN694583	Marine virus AFVG_250M649, complete genome	34101-34127	2	0.926
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	MN694570	Marine virus AFVG_250M650, complete genome	33828-33854	2	0.926
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	136892-136918	2	0.926
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	MN694583	Marine virus AFVG_250M649, complete genome	34104-34127	2	0.917
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	MN694606	Marine virus AFVG_250M830, complete genome	32662-32685	2	0.917
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	MN694570	Marine virus AFVG_250M650, complete genome	33831-33854	2	0.917
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NC_007763	Rhizobium etli CFN 42 plasmid p42b, complete sequence	172325-172349	3	0.88
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP020907	Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence	170397-170421	3	0.88
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NC_021906	Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence	169300-169324	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	92663-92687	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	KU935731	Mycobacterium phage Phrann, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MK524522	Mycobacterium phage Purgamenstris, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MT684588	Mycobacterium phage Snekmaggedon, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MT498044	Mycobacterium phage Jamie19, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	KX756439	Mycobacterium phage PhancyPhin, complete genome	17037-17061	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MK392367	Mycobacterium phage BabeRuth, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MK524520	Mycobacterium phage Nenae, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	JN624851	Mycobacterium phage Redi, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MK524509	Mycobacterium phage SpongeBob, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	MK524528	Mycobacterium phage ShrimpFriedEgg, complete genome	17040-17064	3	0.88
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	226805-226829	3	0.88
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	598959-598985	3	0.889
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1214579-1214605	3	0.889
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	MN694606	Marine virus AFVG_250M830, complete genome	32659-32685	3	0.889
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1214582-1214605	3	0.875
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NZ_CP053574	Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence	107295-107318	3	0.875
NZ_CP029195_12	12.8|6314070|24|NZ_CP029195|CRT	6314070-6314093	24	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	598959-598982	3	0.875
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	KF279411	Mycobacterium phage Adawi, complete genome	55106-55131	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP030373	Salinibacter ruber strain RM158 plasmid pSR47, complete sequence	15646-15671	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NC_014157	Salinibacter ruber M8 plasmid pSR84, complete sequence	67869-67894	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1828807-1828832	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	762003-762028	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	812662-812687	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1215164-1215189	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1456689-1456714	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	726945-726970	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	885282-885307	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1474273-1474298	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	902989-903014	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1078890-1078915	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	641090-641115	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1231850-1231875	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	802112-802137	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1811855-1811880	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	225083-225108	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	889628-889653	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1211705-1211730	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	610557-610582	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	816168-816193	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	715502-715527	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	814770-814795	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1003014-1003039	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	267562-267587	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	811974-811999	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1173327-1173352	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	889617-889642	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1002981-1003006	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	877956-877981	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	922682-922707	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1002982-1003007	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	782574-782599	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	877956-877981	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	922682-922707	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1002995-1003020	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	877956-877981	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	782597-782622	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	877960-877985	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	922682-922707	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	922682-922707	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	922682-922707	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1002995-1003020	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1148288-1148313	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1002984-1003009	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	782597-782622	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	818491-818516	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	799183-799208	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	853418-853443	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	890300-890325	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1262484-1262509	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1002984-1003009	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	782597-782622	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	877956-877981	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	915561-915586	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1002980-1003005	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	782597-782622	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	782597-782622	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1002995-1003020	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	922684-922709	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1176270-1176295	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1003006-1003031	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1002984-1003009	3	0.885
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1176270-1176295	3	0.885
NZ_CP029195_15	15.1|7383186|25|NZ_CP029195|CRISPRCasFinder	7383186-7383210	25	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	53915-53939	3	0.88
NZ_CP029195_15	15.1|7383186|25|NZ_CP029195|CRISPRCasFinder	7383186-7383210	25	NZ_CP012886	Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence	265962-265986	3	0.88
NZ_CP029195_15	15.1|7383186|25|NZ_CP029195|CRISPRCasFinder	7383186-7383210	25	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	1486310-1486334	3	0.88
NZ_CP029195_15	15.1|7383186|25|NZ_CP029195|CRISPRCasFinder	7383186-7383210	25	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	325929-325953	3	0.88
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NZ_CP013744	Streptomyces sp. CdTB01 plasmid unnamed, complete sequence	232084-232112	4	0.862
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1184866-1184890	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1233791-1233815	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1103232-1103256	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1162957-1162981	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1102329-1102353	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1136523-1136547	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1136511-1136535	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1103224-1103248	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1102580-1102604	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1103215-1103239	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1184978-1185002	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1184961-1184985	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1184955-1184979	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	43669-43693	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1540736-1540760	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1540871-1540895	4	0.84
NZ_CP029195_3	3.1|2169482|25|NZ_CP029195|CRISPRCasFinder	2169482-2169506	25	NZ_CP011274	Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence	7717-7741	4	0.84
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	426458-426482	4	0.84
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1249459-1249483	4	0.84
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	839166-839190	4	0.84
NZ_CP029195_3	3.2|2169536|25|NZ_CP029195|CRISPRCasFinder	2169536-2169560	25	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1249603-1249627	4	0.84
NZ_CP029195_3	3.3|2169590|25|NZ_CP029195|CRISPRCasFinder	2169590-2169614	25	KY053532	Siphovirus 29632, complete genome	15701-15725	4	0.84
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP053574	Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence	107295-107321	4	0.852
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	87991-88017	4	0.852
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	79281-79307	4	0.852
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_LS974446	Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence	151311-151337	4	0.852
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1045085-1045111	4	0.852
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP018234	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence	171300-171325	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	KR080200	Mycobacterium phage AlanGrant, complete genome	69882-69907	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	KR080194	Mycobacterium phage Vincenzo, complete genome	69912-69937	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1432858-1432883	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	106688-106713	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP028921	Gemmobacter sp. HYN0069 plasmid unnamed3, complete sequence	2546-2571	4	0.846
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NC_008195	Mycobacterium phage Cooper, complete genome	55826-55851	4	0.846
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	302432-302460	5	0.828
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NC_016586	Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence	678109-678137	5	0.828
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	535488-535516	5	0.828
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP025614	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence	138876-138904	5	0.828
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_LR134461	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence	28563-28595	5	0.848
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	356325-356351	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP035513	Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence	252047-252073	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	583787-583813	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1620468-1620494	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5529007-5529033	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	JN672684	Enterobacteria phage F20, partial genome	18513-18539	5	0.815
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP013345	Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence	187414-187440	5	0.815
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	231318-231343	5	0.808
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2523880-2523905	5	0.808
NZ_CP029195_1	1.1|183399|31|NZ_CP029195|CRISPRCasFinder	183399-183429	31	NZ_CP007130	Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence	442509-442539	6	0.806
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NZ_CP031166	Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence	381725-381753	6	0.793
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1742497-1742525	6	0.793
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	816215-816243	6	0.793
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	254250-254278	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	474583-474611	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1554291-1554319	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1506589-1506617	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1506596-1506624	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	1416805-1416833	6	0.793
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	1362079-1362107	6	0.793
NZ_CP029195_12	12.5|6313920|27|NZ_CP029195|CRT	6313920-6313946	27	NZ_CP021914	Sagittula sp. P11 plasmid unnamed1, complete sequence	125417-125443	6	0.778
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP023152	Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence	112184-112209	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NC_023283	Streptomyces sp. FR1 plasmid pFRL3, complete sequence	170148-170173	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	206776-206801	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_CP016078	Actinoalloteichus sp. GBA129-24 plasmid pGBA129-24a, complete sequence	39673-39698	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NZ_AP012556	Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence	26436-26461	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	NC_004462	Thermus thermophilus phage IN93, complete genome	15151-15176	6	0.769
NZ_CP029195_13	13.1|6562045|26|NZ_CP029195|CRISPRCasFinder	6562045-6562070	26	AB063393	Thermus thermophilus phage IN93 DNA, complete genome	15151-15176	6	0.769
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	620255-620283	7	0.759
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	MH834619	Arthrobacter phage Maureen, complete genome	37315-37343	7	0.759
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NC_048115	Arthrobacter phage Liebe, complete genome	37316-37344	7	0.759
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	319576-319604	7	0.759
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	NZ_CP034180	Mycobacteroides abscessus strain GZ002 plasmid pMabS_GZ002, complete sequence	8624-8656	7	0.788
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	NC_010394	Mycobacterium abscessus plasmid, complete sequence	10371-10403	7	0.788
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	NC_010604	Mycobacterium marinum M plasmid pMM23, complete sequence	7837-7869	7	0.788
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	MT684596	Streptomyces phage Zeigle, complete genome	19558-19590	7	0.788
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	MN994275	Streptomyces phage JXY1, complete genome	3631-3663	7	0.788
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	KT997863	Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome	36-68	7	0.788
NZ_CP029195_2	2.1|330432|29|NZ_CP029195|CRISPRCasFinder	330432-330460	29	MK737942	Microbacterium phage Sucha, complete genome	37245-37273	8	0.724
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	433751-433779	8	0.724
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	157642-157670	8	0.724
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP015237	Rhodococcus fascians D188 plasmid unnamed2, complete sequence	44674-44702	8	0.724
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP031080	Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence	293963-293991	8	0.724
NZ_CP029195_2	2.2|330484|29|NZ_CP029195|CRISPRCasFinder	330484-330512	29	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	397915-397943	8	0.724
NZ_CP029195_7	7.2|3824629|33|NZ_CP029195|CRISPRCasFinder	3824629-3824661	33	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	545411-545443	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_CP031815	Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence	86081-86113	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_CP035203	Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence	9809-9841	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_CP013634	Rhizobium sp. N324 plasmid pRspN324d, complete sequence	250316-250348	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	300850-300882	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	MN256758	Escherichia coli strain 4M8F plasmid p4M8F, complete sequence	5116-5148	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	NC_009955	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI01, complete sequence	115143-115175	9	0.727
NZ_CP029195_12	12.2|6313773|33|NZ_CP029195|CRT	6313773-6313805	33	MN256757	Escherichia coli strain 4M18F plasmid p4M18F, complete sequence	5116-5148	9	0.727

1. spacer 16.5|7546145|21|NZ_CP029195|CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 1, identity: 0.952

cgccgggtccggggctacgac	CRISPR spacer
cgccgggtccagggctacgac	Protospacer
**********.**********

2. spacer 16.7|7546229|21|NZ_CP029195|CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 1, identity: 0.952

cgccgggtccggggctacgac	CRISPR spacer
cgccgggtccagggctacgac	Protospacer
**********.**********

3. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to MN694583 (Marine virus AFVG_250M649, complete genome) position: , mismatch: 2, identity: 0.926

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
tggtggcgacgacggcggtggcggcgg	Protospacer
**********.** *************

4. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to MN694570 (Marine virus AFVG_250M650, complete genome) position: , mismatch: 2, identity: 0.926

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
tggtggcgacgacggcggtggcggcgg	Protospacer
**********.** *************

5. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 2, identity: 0.926

tggtgg-cgacaaccgcggtggcggcgg	CRISPR spacer
-ggtggtcgacaaccgcggcggcggcgg	Protospacer
 ***** ************.********

6. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to MN694583 (Marine virus AFVG_250M649, complete genome) position: , mismatch: 2, identity: 0.917

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacgacggcggtggcgg	Protospacer
**********.** **********

7. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to MN694606 (Marine virus AFVG_250M830, complete genome) position: , mismatch: 2, identity: 0.917

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacgacggcggtggcgg	Protospacer
**********.** **********

8. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to MN694570 (Marine virus AFVG_250M650, complete genome) position: , mismatch: 2, identity: 0.917

tggtggcgacaaccgcggtggcgg	CRISPR spacer
tggtggcgacgacggcggtggcgg	Protospacer
**********.** **********

9. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NC_007763 (Rhizobium etli CFN 42 plasmid p42b, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacgtcggcaccccagccga	Protospacer
.******** *.*************

10. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP020907 (Rhizobium etli strain NXC12 plasmid pRetNXC12a, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacgtcggcaccccagccga	Protospacer
.******** *.*************

11. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NC_021906 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1a, complete sequence) position: , mismatch: 3, identity: 0.88

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacgtcggcaccccagccga	Protospacer
.******** *.*************

12. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
ccgtcgccgccagcaccccgacacg	Protospacer
****** ** ************** 

13. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to KU935731 (Mycobacterium phage Phrann, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

14. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MK524522 (Mycobacterium phage Purgamenstris, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

15. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MT684588 (Mycobacterium phage Snekmaggedon, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

16. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MT498044 (Mycobacterium phage Jamie19, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

17. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to KX756439 (Mycobacterium phage PhancyPhin, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

18. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MK392367 (Mycobacterium phage BabeRuth, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

19. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MK524520 (Mycobacterium phage Nenae, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

20. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to JN624851 (Mycobacterium phage Redi, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

21. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MK524509 (Mycobacterium phage SpongeBob, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

22. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to MK524528 (Mycobacterium phage ShrimpFriedEgg, complete genome) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
gcggcggcggcagcaccccgacgcc	Protospacer
 ** ******************.**

23. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 3, identity: 0.88

ccgtcggcggcagcaccccgacacc	CRISPR spacer
cctttagcggcagcaccccgacacc	Protospacer
** *..*******************

24. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.889

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cggtggcggccaccgcggtggcggcgg	Protospacer
.*******.* ****************

25. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.889

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cggtggcggccaccgcggtggcggcgg	Protospacer
.*******.* ****************

26. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to MN694606 (Marine virus AFVG_250M830, complete genome) position: , mismatch: 3, identity: 0.889

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
tggtggcgacgacggcggtggcggcga	Protospacer
**********.** ************.

27. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 3, identity: 0.875

tggtggcgacaaccgcggtggcgg	CRISPR spacer
cggtggcggccaccgcggtggcgg	Protospacer
.*******.* *************

28. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to NZ_CP053574 (Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

tggtggcgacaaccgcggtggcgg	CRISPR spacer
gggtggcgacaacggcgctggcgg	Protospacer
 ************ *** ******

29. spacer 12.8|6314070|24|NZ_CP029195|CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 3, identity: 0.875

tggtggcgacaaccgcggtggcgg	CRISPR spacer
cggtggcggccaccgcggtggcgg	Protospacer
.*******.* *************

30. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to KF279411 (Mycobacterium phage Adawi, complete genome) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgccccgat	CRISPR spacer
ccacggcgggaccgccccgccccggt	Protospacer
 *.*********************.*

31. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP030373 (Salinibacter ruber strain RM158 plasmid pSR47, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgccccgat	CRISPR spacer
accgggcgggaccgccgcgccccgat	Protospacer
**  ************ *********

32. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NC_014157 (Salinibacter ruber M8 plasmid pSR84, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgccccgat	CRISPR spacer
accgggcgggaccgccgcgccccgat	Protospacer
**  ************ *********

33. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

34. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

35. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

36. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

37. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

38. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

39. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

40. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

41. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

42. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

43. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

44. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

45. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

46. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

47. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

48. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

49. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

50. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

51. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

52. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

53. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

54. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

55. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

56. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

57. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

58. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

59. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

60. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

61. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

62. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

63. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

64. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

65. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

66. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

67. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

68. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

69. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

70. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

71. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

72. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

73. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

74. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

75. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

76. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

77. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

78. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

79. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

80. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

81. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

82. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

83. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

84. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

85. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

86. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

87. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

88. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

89. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

90. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

91. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

92. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

93. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

94. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 3, identity: 0.885

acgcggcgggaccgccccgcc-ccgat	CRISPR spacer
actcggcgggaccgccccgccaacga-	Protospacer
** ******************  *** 

95. spacer 15.1|7383186|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

ccggaccgcccgcgcgggtccgggg	CRISPR spacer
ccggaccgcccgcgcgggcctgggc	Protospacer
******************.*.*** 

96. spacer 15.1|7383186|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP012886 (Mycobacterium chimaera strain AH16 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.88

ccggaccgcccgcgcgggtccgggg	CRISPR spacer
caggaccgaccgcgcgggtccgggc	Protospacer
* ****** *************** 

97. spacer 15.1|7383186|25|NZ_CP029195|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 3, identity: 0.88

ccggaccgcccgcgcgggtccgggg	CRISPR spacer
ccggaccgcccgcgcgtgtcagggc	Protospacer
**************** *** *** 

98. spacer 15.1|7383186|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.88

ccggaccgcccgcgcgggtccgggg	CRISPR spacer
tcggaccgcccccgcgggtccaggg	Protospacer
.********** *********.***

99. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP013744 (Streptomyces sp. CdTB01 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.862

-ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
ctgcg-aaccgaccaccccgtccccgacct	Protospacer
  *** * ******* **************

100. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

101. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

102. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

103. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

104. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

105. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

106. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

107. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

108. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

109. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

110. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

111. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

112. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
aggccgacggcagcacgccagccat	Protospacer
.*************** ******. 

113. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
gcgccgacggcagcacccccgccag	Protospacer
* ***************** ***..

114. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
gggccgacggcagccccgcagcccc	Protospacer
************** ** *****  

115. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
gggccgacggcagccccgcagcccc	Protospacer
************** ** *****  

116. spacer 3.1|2169482|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP011274 (Planctomyces sp. SH-PL62 plasmid pPL62-1, complete sequence) position: , mismatch: 4, identity: 0.84

gggccgacggcagcaccccagccga	CRISPR spacer
acgccgacggcagcacctcggccga	Protospacer
. ***************.*.*****

117. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcggcggcagcaccccgacacc	CRISPR spacer
tgctcggcggcagcaccccgacatc	Protospacer
.  ********************.*

118. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcggcggcagcaccccgacacc	CRISPR spacer
ccgtcggtggcagcgccccgacagg	Protospacer
*******.******.********  

119. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcggcggcagcaccccgacacc	CRISPR spacer
acgtcggcggcatcaccccgacgac	Protospacer
 *********** *********. *

120. spacer 3.2|2169536|25|NZ_CP029195|CRISPRCasFinder matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.84

ccgtcggcggcagcaccccgacacc	CRISPR spacer
ccgtcggtggcagcgccccgacagg	Protospacer
*******.******.********  

121. spacer 3.3|2169590|25|NZ_CP029195|CRISPRCasFinder matches to KY053532 (Siphovirus 29632, complete genome) position: , mismatch: 4, identity: 0.84

cgacacccgaaagccccccggccga	CRISPR spacer
gggcacccgaaagcgccccggccgc	Protospacer
 *.*********** ********* 

122. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP053574 (Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.852

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
gggtggcgacaacggcgctggcggcga	Protospacer
 ************ *** ********.

123. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.852

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgatggcgacacccgcggcggcggcgg	Protospacer
.*.******** ******.********

124. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.852

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgatggcgacacccgcggcggcggcgg	Protospacer
.*.******** ******.********

125. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_LS974446 (Rhizobium selenitireducens ATCC BAA-1503 isolate T2.30D-1.1_plasmid plasmid 1, complete sequence) position: , mismatch: 4, identity: 0.852

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
tcctggcgaccaccgcggcggcggcgg	Protospacer
*  ******* *******.********

126. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 4, identity: 0.852

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgatggcgacacccgcggcggcggcgg	Protospacer
.*.******** ******.********

127. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP018234 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed6, complete sequence) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
ctgccgcgggaccgtcccgccccgat	Protospacer
 .** *********.***********

128. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to KR080200 (Mycobacterium phage AlanGrant, complete genome) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
gcccggcgggaccgccccgccccaac	Protospacer
.* ********************.*.

129. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to KR080194 (Mycobacterium phage Vincenzo, complete genome) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
gcccggcgggaccgccccgccccaac	Protospacer
.* ********************.*.

130. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
acgcggcgggaccgccctgccgcaag	Protospacer
*****************.*** *.* 

131. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
atccggcaggaccgctccgccccgat	Protospacer
*. ****.*******.**********

132. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP028921 (Gemmobacter sp. HYN0069 plasmid unnamed3, complete sequence) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
atccggcaggaccgctccgccccgat	Protospacer
*. ****.*******.**********

133. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NC_008195 (Mycobacterium phage Cooper, complete genome) position: , mismatch: 4, identity: 0.846

acgcggcgggaccgccccgccccgat	CRISPR spacer
ccacggcgggacagccccgccccggt	Protospacer
 *.********* ***********.*

134. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 5, identity: 0.828

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
gccgagcagcaccgacgccagcgcagcga	Protospacer
******************* ** *..** 

135. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 5, identity: 0.828

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ggccagcagcgccgacgcccgcccaacgt	Protospacer
* * ******.*************.***.

136. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 5, identity: 0.828

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
gccgagcagcaccgacgccagcgccgcga	Protospacer
******************* ** * .** 

137. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP025614 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.828

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
gccgcgcagcaccgccgcccgccaggtgc	Protospacer
**** ********* ******** *..**

138. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NZ_LR134461 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 19, complete sequence) position: , mismatch: 5, identity: 0.848

ccgtggtggcgaccgcggcgggttcc--gtcggga	CRISPR spacer
gcgtggtggcggccgcggcgggctccttgtcgg--	Protospacer
 **********.**********.***  *****  

139. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
caatggcgacggccgcggtggcggcgg	Protospacer
...*******..***************

140. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP035513 (Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
ccggggcgacatccgcggtggcggcga	Protospacer
. * ******* **************.

141. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
ggccggcgagtaccgcggtggcggcgg	Protospacer
 * .*****  ****************

142. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgatggcgacacccgcggcggcggcgc	Protospacer
.*.******** ******.******* 

143. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgttggcgacaacctcggtagcggcgc	Protospacer
.* *********** ****.****** 

144. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgtcggcgacaaacgcggcggcggcgg	Protospacer
.* .******** *****.********

145. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP013345 (Sphingopyxis macrogoltabida strain 203N plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.815

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cgacgccgacatccgcggtggcggcgg	Protospacer
.*..* ***** ***************

146. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 5, identity: 0.808

acgcggcgggaccgccccgccccgat	CRISPR spacer
ccggggcgggaccgcccggccccgcg	Protospacer
 ** ************* ******  

147. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

acgcggcgggaccgccccgccccgat	CRISPR spacer
gcgcggcgggagcgccccgcccggcg	Protospacer
.********** ********** *  

148. spacer 1.1|183399|31|NZ_CP029195|CRISPRCasFinder matches to NZ_CP007130 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence) position: , mismatch: 6, identity: 0.806

-agtgcgacgcgtcacgcgggtcggacgcgtc	CRISPR spacer
ggatgcgg-gcgtcacgcgcgtcgggcgcgtc	Protospacer
 ..****. ********** *****.******

149. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 6, identity: 0.793

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
accgcacccgaccagaccggccccgaacc	Protospacer
. ************* *** ****** *.

150. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.793

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
gaaggcgccgacccgcccgtccccgacct	Protospacer
*. *   ****** ***************

151. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.793

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
gaaggcgccgacccgcccgtccccgacct	Protospacer
*. *   ****** ***************

152. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
gaaggcgccgacccgcccgtccccgacct	Protospacer
*. *   ****** ***************

153. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
gccgagcagcaccgacgccagcgccgcca	Protospacer
******************* ** * .*  

154. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
atcgagcagcaccggcgcccgcccaccga	Protospacer
..************.*********. ** 

155. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ggcgagcagcaccgtcacccgcccggccg	Protospacer
* ************ *.********.*  

156. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ggcgagcagcaccgtcacccgcccggccg	Protospacer
* ************ *.********.*  

157. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ggcgagcagcaccgtcacccgcccggccg	Protospacer
* ************ *.********.*  

158. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ggcgagcagcaccgtcacccgcccggccg	Protospacer
* ************ *.********.*  

159. spacer 12.5|6313920|27|NZ_CP029195|CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.778

tggtggcgacaaccgcggtggcggcgg	CRISPR spacer
cttcggcgacaacggcggtggcgacgg	Protospacer
.  .********* *********.***

160. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP023152 (Mycobacterium chimaera strain FLAC0070 plasmid pFLAC0070_1, complete sequence) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
acggggcgggaccgccccgccggacg	Protospacer
*** *****************  .  

161. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NC_023283 (Streptomyces sp. FR1 plasmid pFRL3, complete sequence) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
cgtcggcgggaccgccccgccctggc	Protospacer
   *******************.*..

162. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
cgtcggcgggaccgccccgccctggc	Protospacer
   *******************.*..

163. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_CP016078 (Actinoalloteichus sp. GBA129-24 plasmid pGBA129-24a, complete sequence) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
gtccggcgggacagccccgccccgcc	Protospacer
.. ********* *********** .

164. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NZ_AP012556 (Mycobacterium avium subsp. hominissuis TH135 plasmid pMAH135, complete sequence) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
acggggcgggaccgccccgccggacg	Protospacer
*** *****************  .  

165. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to NC_004462 (Thermus thermophilus phage IN93, complete genome) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
ggccggccggaccgccccgccccgtg	Protospacer
.  **** ****************  

166. spacer 13.1|6562045|26|NZ_CP029195|CRISPRCasFinder matches to AB063393 (Thermus thermophilus phage IN93 DNA, complete genome) position: , mismatch: 6, identity: 0.769

acgcggcgggaccgccccgccccgat	CRISPR spacer
ggccggccggaccgccccgccccgtg	Protospacer
.  **** ****************  

167. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 7, identity: 0.759

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
cccgcccccgaccagcccgcccccgccac	Protospacer
  *** *************.***** * .

168. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to MH834619 (Arthrobacter phage Maureen, complete genome) position: , mismatch: 7, identity: 0.759

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
cggggtcaggaccgacgcctgcccgacgc	Protospacer
   *. *** *********.*********

169. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NC_048115 (Arthrobacter phage Liebe, complete genome) position: , mismatch: 7, identity: 0.759

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
cggggtcaggaccgacgcctgcccgacgc	Protospacer
   *. *** *********.*********

170. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 7, identity: 0.759

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
gccgagcagccccgccgcccgccgccggg	Protospacer
********** *** ********    * 

171. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to NZ_CP034180 (Mycobacteroides abscessus strain GZ002 plasmid pMabS_GZ002, complete sequence) position: , mismatch: 7, identity: 0.788

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
tcggcctcgcggatcagctgctcctgaccggcg	Protospacer
.* .** ********************* * * 

172. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to NC_010394 (Mycobacterium abscessus plasmid, complete sequence) position: , mismatch: 7, identity: 0.788

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
tcggcctcgcggatcagctgctcctgaccggcg	Protospacer
.* .** ********************* * * 

173. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to NC_010604 (Mycobacterium marinum M plasmid pMM23, complete sequence) position: , mismatch: 7, identity: 0.788

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
tcggcctcgcggatcagctgctcctgaccggcg	Protospacer
.* .** ********************* * * 

174. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to MT684596 (Streptomyces phage Zeigle, complete genome) position: , mismatch: 7, identity: 0.788

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
gactcggcgcggatcagcgcctcctgacggtac	Protospacer
  * * ************  *********** *

175. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to MN994275 (Streptomyces phage JXY1, complete genome) position: , mismatch: 7, identity: 0.788

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
gactcggcgcggatcagcgcctcctgacggtac	Protospacer
  * * ************  *********** *

176. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to KT997863 (Uncultured Mediterranean phage uvDeep-CGR2-KM21-C338, complete genome) position: , mismatch: 7, identity: 0.788

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cctggtcggcgaccggggcgggttccggcggca	Protospacer
**  * .******** *********** *** *

177. spacer 2.1|330432|29|NZ_CP029195|CRISPRCasFinder matches to MK737942 (Microbacterium phage Sucha, complete genome) position: , mismatch: 8, identity: 0.724

ggcgcacccgaccagcccgtccccgacct	CRISPR spacer
cacaaccccgaccagcccctccccgacac	Protospacer
 .*.  ************ ******** .

178. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.724

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
catcgcccgcaccgacgcccgcacgacgc	Protospacer
  . . * ************** ******

179. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 8, identity: 0.724

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
catcagcagcaccgccgccagcccgacca	Protospacer
  . ********** **** *******  

180. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP015237 (Rhodococcus fascians D188 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.724

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
ctgttgcagcaacgacgcccgcacgacga	Protospacer
 .   ****** ********** ***** 

181. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 8, identity: 0.724

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
cagcagcagcaccggcgccagcccgaccg	Protospacer
    **********.**** *******  

182. spacer 2.2|330484|29|NZ_CP029195|CRISPRCasFinder matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.724

gccgagcagcaccgacgcccgcccgacgc	CRISPR spacer
catcgcccgcaccgacgcccgcacgacgc	Protospacer
  . . * ************** ******

183. spacer 7.2|3824629|33|NZ_CP029195|CRISPRCasFinder matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 9, identity: 0.727

cccaccgcgcggatcagctgctcctgacggtcc	CRISPR spacer
cgctgcgcccggatcagctgctcctcacgtggt	Protospacer
* *  *** **************** ***   .

184. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NZ_CP031815 (Klebsiella pneumoniae strain KSB1_7F-sc-2280268 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cgctggtggcgaccgggacgggttccggtaaaa	Protospacer
*  ************ *.********* ....*

185. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NZ_CP035203 (Klebsiella pneumoniae strain LH94 plasmid pLH94-1, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cgctggtggcgaccgggacgggttccggtaaaa	Protospacer
*  ************ *.********* ....*

186. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NZ_CP013634 (Rhizobium sp. N324 plasmid pRspN324d, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
aaggcctggcgacgacggcgggttccgtcgtgc	Protospacer
  *   ******* .*************** * 

187. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
agggcctggcgacgacggcgggttccgtcgtgc	Protospacer
  *   ******* .*************** * 

188. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to MN256758 (Escherichia coli strain 4M8F plasmid p4M8F, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cgctggtggcgaccgggacgggttccggtaaaa	Protospacer
*  ************ *.********* ....*

189. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to NC_009955 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI01, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cgaccgacgcgaccgcggcggattcggtcgggg	Protospacer
* .. *  *************.*** ******.

190. spacer 12.2|6313773|33|NZ_CP029195|CRT matches to MN256757 (Escherichia coli strain 4M18F plasmid p4M18F, complete sequence) position: , mismatch: 9, identity: 0.727

ccgtggtggcgaccgcggcgggttccgtcggga	CRISPR spacer
cgctggtggcgaccgggacgggttccggtaaaa	Protospacer
*  ************ *.********* ....*

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	3333838 : 3352146	14	Streptomyces_phage(72.73%)	tail	NA
DBSCAN-SWA_2	6343290 : 6350462	8	uncultured_Mediterranean_phage(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP029195|3333838:3352146|DBSCAN-SWA
CATGGCTTTCACCAGCTCCATGAAGAAGGCGTCCGACTCCCTGCGGAACCTCAAGACGCAGGCCTCCGGCGCCGCGACCTCGGTCAAGAAGGTCGGCGACGCGGGCAACTCGGCGAACGGTCAGCTCAAGAACCTCAAGACCGGCGCCCAGGGTTCCAGCACCCAGCTCAAGAACCTCAAGACCGCCTCGGACCAGGCCGAGAAGTCGATGACGAAGGCCGGCCGGACCGCCGAGTCGGCCGGCACCAAGATGGGCAAGTACGAGTCCGGCGCCGGCAAGGCCGCCAAGGGCCAGGACAAGCTCAACAAGTCGATGAAGGGCAACTTCCTCGCCCGCCTCATCGAACTCTTCATGCCTCTCATCGAGAAGATCGTCGACATGGCGATGCAGTCGAAGACGATGCAGAAGGTCCTGAAGAAGGCCTTCGACGCCGTGAAGACCGTGATCAGCGCGGTCATGAAGGCGATCGGCCCGATCATGAAGAAGGCCGGACAGCTGATCAAGACGGTGTGGAACGGCATCAAGAAGGCGATCTCCTCCGTCGTCAAGGCCGTCGCCACCGTCATCAAGACCTACGTGAACATCTGGAAGACCGTCATCACCACGGTCATGAAGGCGATCAAGACGGTCGTCGGCGCCGTCTGGAAGGGCATCAAGGCCGTCATCACCCCGGTGGTGAACTGGATCAAGAGCGCCATCCCGAACGCCTTCCGGGCGGTCAAGGACAAGATGTCCTCCATCTGGAACGGCCTCAAGGACATCGCGTCCCGGGCCTTCGAGGGCATCAAGAGCGGTGTGTCCGGTCCGATCAACGCCGTCATCGGGATGATCAACCGGATGATCAGGGCCGTCAACGGCGTCAAGGTCAGCGTCCCCGGCTGGGTGCCGCTCGTCGGCGGCAAGACCTTCGGCGTCAACATCCCGACCATCCCCATGCTCGCCACCGGCGGTGTCGTGATGCCCCGCAGCGGCGGTGTCCCGGCGATCCTCGCCGAGGCCGGCGAGGCCGAGGCCGTCCTGCCGCTGTCCAAGCTGGACCGGCTGCTCGCCCTCACCGCCCGGCGCGCCCGCATGTCGGCGCAGCTGCAGGGGGGCAAGGGCGGCGGGGGCGCCGGGCTGCACATCGAGCACTACCACGCGGCCCGCAACAGTGACCCGCAGTCCACGGCGGACGCGCTGATGTACCTGGCGAAGGCACGCGGATGAGTGCCGTCGCGGCCTTCCCGAACCCGTTCGCCGGTGCCCTGCCGGTGATGACCTCCCTCAGGCGCGGTCTCGGTCAGGCGGGCGACGGACTGAAGCGGCTCCGGGAGGACACCGTGCGCGCCGGCGGCGGCATGAACCGGTTCGCCGCCGGTCTGCGGACCGCCGCCGCCCCCGTACGGGCCCTCGGTACCGGTGCGTCCGGCGCCGCCGGTTCCGTCCGCCGCATCCAGCGGTCCCGGGCCGTCACCGGCGTACGGAAGATCGGCACCGCCGCGGGCAGGGCGAGGACGGCCGCCGGGCGGCTCGGCCCCGCGGTCGGCGGCATCCTCGCCCTCCTCGTCCCGCTGCTGCCCGTCGCCGACGTCATCACCGGGCTGATGGGCACCTACGGCACGGTCATGACCGTCGCCTCCGTCGCCATGACCGGCATCAACGTCGCCATGCGGGCCAACCCGGTCGGCTTCCTCGTCGGCATCCTCGTCCCGGTCGCCGCCTGGCTCATCGAGTACGCGATGCAGACCGAGACCGGGCAGAAGATCATGCGGCAGGTGTTCCAGGCCGCGCTGAAGGGCTTCCAGTCGGTCTGGGCGTTCCTGCAGCCGGTCCTCAAGCTCATCGGGAAGGCCGTCGGAACGTACGTCAAGGCGTACCTGACCCTGTTCACGTCCGCCCTGAAGGTCATCGGCTCCGGCATCAGCGGCATCTCCCGGGTCCGCACCTCCGTCACCTCCGCCGCCAACGCCCTGCGCGGCATCGCCTCGCGCACGATCGGCGGGATCAAGAGCGCCGTCAAGCCGGTGCTGTCCTTCGTCACGGAGAGGATCCCGGGCTTCTTCCGGCACGCGAAGGACGCCGTCGCCAGGGCGCTGAAGGGGATGGGCGATCTGGTCAAGGGCGCCCTGAGCGCCGTGCTCGGCGTCGTGAAGGGCCCGATCAACGGCCTCATCGCCTTCGCCAACTGGATCATCGACGGGCTCAACAAGCTGAGCGTGAACATCCTCGGCAAGAAGTTCGGCGTCGACATCGACAAGATCCCGATGCTCGCCGAGGGCGGTGTCGTCTTCCCCGGCGCCGACAGCGCGCCGCGCATCGACCCGCTCACCGTGCTCGAACACCGGCGCGTCCCGGCCCTCACCGAGGCTCCCCGGCGGCCGCACCGCATCGCGGAGTTCCACGAGGAGCCGGGCGCCGGCCCGCGGTCGACCGCCGAGGACCTGCTCTTCCTCGTCGGCGCCCACTGCTGAACCCGCCCTTCCACCCGACAGCCCCTCAGAAGTGAGGTGACGGCCACATGGCCGAGACCACAACCACATATGCCGGAAGCAATCTCACCGCCGACCACGCGCCCGGCTCGCTGATCACCCAGGACGGGCAGATCCAGTGGGCCGGGCTTCTCATCGGCCCCGGCACGCCGTTCAACGTCGACCGGACCGGGCTCCAGGGCTGGGAGGACCTGCCCGAGTACGACTCCTCCGACGCCGACCGGCCCACCTCGCACGGCGCCTGGCCCGGCTCCCGCTACGCCAAGCCGCGCAAGATCAGCGGCACGATCGTGCTGGTGCCCGAGTGGAGCCAGACCGCCGAGGCCGTCCGCGCACTGCGCCAGGCGCTCGCCCTGCTCGACGAGGAACGCTGGCTCACCGTCCGGCTGCACGGCGAACTCCTCGCCGTGCGCGCCCGGATCGCGCAGCGCGTGGTCCCCGCCGACCAGGGCTTCGCCACCCAGGGCAGCACGAAGATGTCGATCCAGTGGCTGGCCTCCGACCCGCGCCGCTACGCCGTCAACGAGCAGTCGTCCTCCACCACCCCGCCGCAGCCTGAGACCGGCCTGACCTGGCTGCCGAACGGACTGACCTGGCCGCTCAACTGGGGCCAGGCCAAGTCCACCGGGGACGCCGTCGCCGAGAACACCGGCTCGGCCGCCACCCACCCGGTGATCGTCTTCCGCGGCCCCTGCTCCATGCCGACCGTCACCGAACGGAACAGCAAGCGCCGGCTGCGGTACGCGATCGACCTGGCCGCCGGCGACGAGCTCGTCGTCGACACCGCCGGCGGCACGGTGATGCTCAACAACACCGCCTCCCGCCGCCACACCGCGATGGCCGACTCCAGCCCGGAGGAGCTGTTCCTCCTCGAACCGGGCCGCACGGAGCTGTCGTTCCGGCCCGACGCGTCCACCCCGGAGGCGCTGATGACGATCCGCTGGCGCAGCGCCGAGTGGTGACCGCGGCCCCTCCCCGTACCGACCGCTCCGCACAGAAAGAGGTGCACCCATGACCGTACGGGCCGCCTGGCTCCACTCCACCGGCCAGACCCGCGAGGACACCCGGCTCGCGCTGTCCGCGCTCCTGACGCCCAACGGGCAGAGCGCCGCCGAGACCCCGCTGCGCTCACGGCCCGGCATCGTGCCCGGCGGCCTGGTGCTGACCGGTGCGTCGGCGATGCAGTGCTCGATCGGCGCCGGCCGGGCCGTGATCCAGGGCAGCGACACCGCCCAGGGCGCGTACATGATCGCGGTGACCTCCCCGGAGACCCTGACCATCGCGGACGGCGACCCGCAGTACCCCCGGATCGACCTGATCGAACTGGCCGTCCTCGACGACGCGTACGACCGCAGCGGTGCCACCGACGCCGTGATCCGGCTGGTCAAGGGCACCCCCGCGGCCACCCCCGTCGTCCCGGCCTCGGGCCCCGGCAGCGCCTTCCCGCTCTACACCGTCGCGGTGCCGGCCGGCACCTCGGCCGGCACCGGCGGCATCGCGTGGACCACCGCGGGCGTCGTCACGACCCTGCACTACCCGATGACCGCGCTCGGCGGCATCATCCCGACCAGCGGCTTCAAGGGCGCCTACGTCGGCCAGTACCGGGACGTCTCCGGCCTGCTCCAGCGCTGGGACGGCACGGCCTGGGTCTCGTACCCCAAGCCGATCGGCGGCATCGCCCCGCACGGGACGATGACGACCGGCGGCTACACCGGCCAGTACCGCGACAACGCGGGCGTCCTGCAGCGCTGGGACGGCGCCGCCTGGCAGTACGCGGAGGGCAAGGCCGCCGTCCTGTTCAGCGTCTCGCAGACGTCGATGCAGAGCGTGCCCGCGAGCACCTGGACCCCGATCACCCTCCAGAACGTCGACATCGACGACTTCACCGGCTGGAACGGCTCCGACAGCTTCGTCGTCCCGCGCACCGGCTGGTGGCGGGTCTCCGGCCACGTCGCCTGGAACGGCGACTCCACCACCGGCGTGCGCGGCGCCCGCATCACCCTCGGCGGCGTCGGCGTGCCCCGGATGACCTGGCTGGGCCCGGCGGCCACCGGCGCCGTCACCGTCGGCGGTCAGGGCCTGATCAAGCTCACCGCCGGCAACGTCCTGCAGCTCGCCGGCTACCACAACCACACCGCCGCCGTCCGCACCCTCGGCGGCTCGGGCTACTACAGCAACCTGTCCGCCCAGTGGATCAGGTCCTGACCGCCCCTCCCACCGCACCCCCCGATTGGAGAACCCCGTGAACCTGCGCAGCAGCTGGGTCGCCGAGACCGGCCAGACCCGCGAGGACACCCGCCTCAACCAGGTCGGCGCGACCACCATGATCAACCCCGTCCAGGTCCGCTCCGGCATCCTGCCGGGCTCCTACGACGGCAAGTGGCGGCTGTCCGGCTTCTGGATGGACAAGGCCTCCGCCATGACGGCGACCGTCTCCGAGGGCCGGGCCGTCATCCAGGGCGACATCTCCCAGGGCGTCTACCCGGTGGCCCTGCCCGCCTCCGAGCAGGTCACCTTCGCCGCCGGCGACGCCCAGTACGGCCGGATCGACCTGGTCGTCCTGAAGATCTACGACAACCTCTACGACGGCAGCACCCGCAACGAGGCGAAGGTCGAGATCATCCGGGGCGTGCCCGGCCAGGCCCCCCAGGCGCCGGTGGCCCCGCCGCGCAGCCTCCCGCTGTACGAGGTGACCGTCCCGGCCGGCGCCAGCGCGGGCAACGGCGGCATCCCGTGGAACACCTCCCTGAAGGACCTGCGCACGCCGGTCGTCGCGCTCGGCGGCATCCTCCCGGTCGAGGGCCCGGTGCTGCCGGGCGCCCACCCGGGCCAGTACCAGGACACCGCCAACAACCAGCTGCAGCGCTGGGACGGCGGGCAGTGGGTGGCCTATCCGGAGGCGATCGGCGGCATCGTCCCGTCCTCCGCGTCCACCCTGACGGCCAGCTACACCGGCCAGTACCGGGACACGCCGGGCGGCCAGCTCCAGCGCTGGAACGGTTCGGCGTGGACCCCGGCCGTACCGGGTCCGTACTTCGTCGACAACGGCGACTTCGGCGACACCGCCTCGACCGCCTACACCCCGACGCTGGGCGGCCGCGCCACGAACCCGCTCACGGTCAACTTCGTCGCCCCGCCGTCGAAGGCCGTCGCCGTGAGCTTCGGCTGCAAGCTGCGCTCGGGGAGCCCCGACCACTACGCGTACATGGCGCTCAAGCTCACCCAGGGCGCCACGGTCGTCAACGACCTCGACGACGACTACGCGACGATCGCCGCCAGCCAGCACATGGTCTCGGTCTCCACCACGCGCCGGTATTCGAACCTGACCCCGGGCGCGACCTACACGCTCACGGCCCACTTCCGGGTCATCGCCAACACCCTCGGCCTCAAGGGCGGCTTCGACAACACGTACATCAAGGTCGACCCGCTGCCGTAGCCCCGATCCGCCCCTCCCCCAGGAGACCCCCATGCCCGTACGTACCGGATGGCTGATGCCCACCGGGCAGACCCGCCAGAACACCCGCGTCACCCTCATCGGCGCCACCACCCCCGTCAACCCGCTCGCCGTCCGGTCCGGCATCCTGCCCGGCACGTACGACGGCAAGTTCCGGGTCGGCGGCCTGTGGATGAGCTCCTCCGGCCCGATGACGGCCACCGTCTACCACGGCAAGGCCGTCATCCAGGGCGGCACCACCGACGGTGCCTACCCGGTCGCCCTCGACGAGGACATCACCCTCACCTTCGCCGACGGCGACCCGCTCAACGACCGGATCGACCTCGTCGTGGTCCGCGTCTACGACAACGACGTCGACGCCCTCGGCAAGTACGAGGCCGTCGTCGAGATCGTCAAGGGCACCCCGGCGGCGGTCCCGGCCGCCCCGGCGGCCCCCGCCCGCTCCCTCGTCCTGTTCACCGTGAAGGTCAAGAAGGGCGCCTCCGCCGGGACCGGCGGCATCGACTGGGCGGGCGGCGCCGCCACCGACCTGCGCACCACGACGGTCTCCGCCGGCGGCATCCTGCCCGTCTACAACAACGCCGGCGTGCCCGGCGGCTACCCGGGCCAGTACCAGGACAACGACAACGCCCACTTCCTCCAGCGCTGGGACGGCACCGCCTGGGTCGCCTACCCCAAGGAGATCGGCGGCATCGCGCCCAGCGGCACGATCGCCACCGGCAGCTACACCGGCCAGTACCGGGACTCGGGCGGCGGCCAGCTCCAGCGCTGGAACGGCAGCGCCTGGGTGGCCTACCAGCCGCCGGTCGAGGTCGAGACGACCAACACCGGTGCGACGGCACTGGCCAACTGGTCGCTGACCTCCTTCGCCGGCCGCAGGACCAAGGGCGGCCTGTGCACCGTCACCTTCCTCGTCACCCGCACCGGCGCCCAGGTCGACGCCAACACCGCCGGCAACATCAACGACGAACCGCTGTGCGTCCTGCCCGCCGGCTGGCGGCCCGCCCTCGACTTCGAGACCACCGGCTGCGACGGCTTCGGCTCCGGCGGCGTGGTCCTCAGCGCCTCCAGCGGACAGGCGGTCCTGCGCACCTGGTCCTCGGGCGGCGCCCTCGTCCCCGGCCGGAACATCCGCGTCTCCGCCACCTACGTCCTGTAAGGGGGGCCTCGATGGCCATCGAAACGCCCTACCGGGCGATCTTCTGCGACCTGCTCACCGACCAGACGCTGGACATCCTGCCGCTGCGGGACGTCTCGTTCGACGACTACATCGGCAAGGCGGGCTCGCTCTCCGGCACCGTCCCCATCCCCGACAAGGCCATCGCCGACCGGGTCAAGAAGGTGCGGGAGGGCCGCACCGCGGTCTACCTGGAGCGCGGCGGCGACCTGTGGTGGGGCGGCATCGTCTGGACCAGCACCCTGCAGTCCAGCGGCCGCGGCGTGCTGACCCTCGGCATCCAGGCCGCGACCTTCGACTCGTACGCCGGGCGCCGCCGCATCCGTACCGACATCACCTACGACACCCCGACCGACCAGCTGGAGATCGCGCGCCGGCTCTGGCGCGAACTCGACGTCCAGACCTACCCCGACGCCCCCGCGGGCGAGGAGCCCCGCCGCCTCGGGATCACCTTCGGCAACGAAATCCCCAAGTTCCAGAAGACCGCCTCGTGGCGGAAGGGCGACGAGACCGTCTACCTGGAGGCGCTCGACCAGCTCGCCGCGACGGAGAACGGCTTCGAGCACCAGATCCTGGTCTACCGCGATCCGGTCACCGGGCAGCGGATCCGGCAGCTCCGGATCGGCGAACCCAAGATCGTCACCGGCGCGACCGATCTGGTCTTCGACCGGCCCGGCGTCATCCTGTCGTACTCCTTCCCGTACGACGCGACCCGCGGCGGCACCACCGCCGTCGCCCGCGGCGCCTCCACCAACGCCAACGCCGCCGCCGAGTCCCGGCCGATCTTCTCCGGCACGCAGTACGCCAGCGACCTGCTCGTGGACGGCTGGCCGCTGATCGACCTCTCCTCGGACCACAACGAGATCACCGACCAGCTCGCCCTCGACTCGGTGGCCGCCACCGAGCTCGCGCAGGCGCGCGGCGCCGTGGTGATCCCCTCGATCAGCATCCACCTCGGCGGGATCGTCCCGCCGGCGCTGCTCGGCCGCGTCGCCCGCATCCGGATCACCGACGAGTGGTACTCCCAGGGCCTCGACGCCCGCTACCGGATCATCGGCGTCAAGATCACCCCGCCGGAACGCGGCCGGGCCGACACCGCCGAGCTCTACCTTGAGGAGGCCTGATGCCCCAGTTGCCCGAGGACATCATCGACCGGCTCAACCAGATGGAACGCCGCCTCAAGGCCCTGTCGACCGCGGTCAACACCCGCCCCGCCGTCAACGAGTTCCGTCCCACGCCGTCCGAGAGCGTCACCATCACCCGGCCGCTGTTCCGGATCTTCGACGGCTACAACCACGAGATCTTCGCGGACGACATCCTGACCGGCGGTCTCGCCCGGCCGTGGCTGCAACTGATGCCGCCACTGGCCAGCGACCCGGCCAAGTGGCCCTCCACCACGGCCGCCGCCTTCACGACCATCGCCCGCTGCTCCAACCCCATCTGGCAGCCGAAGCTCCGGCTCGCCATCAGCACGGCGGCCTCCAGCGGCGCCACCGGGAAGGTACGGGTCCTCGTCGACAGCGTCCCGTTCGGCCCCGCGGTCACCGCGGGCACCACCTACGACTACCTCGGCCTGCTGCCCGGCGACATGAAGACCCGGTTCGGCCAGACCATGAACATCGAGATCCAGGCCCAGGCCACCGGCGGCACCGTCTACGCCCAGCCCGTCCTCATCCACGGCGCCCAGACCTGACCCGCCCGCCGCAGACCGCACGGACCACAAGGAGCACCCCTTGAACATCGACCCCACCGAGCCCTGGGGCGTGGCCATCGACTACGCGGGCCGCGCCGCCGTCACCGAGGACGGCCACACCGTCGACGTACGCGTCTACGACAACAGCCTGGGCCACGCCCTCCAGCGCGACCCGGTCACCGGGCAGTACCCGGCCGTGTACGTGACCGCCGAGGTCACCGAGAAGGGCACCGGCGACGCCGTCCTGCGCGGCTCCGGCCTGATCATCGTCGACGCGCGGGACGGCGCCCCGGTCGTCCCCGACCCGACCTCCGTCCAGCGGGCCGTCACGGCCGCGCTCGCCGACTTCGAGACCCGCCGGGCCGCCTGCGCCGCACTGTGCGCGGCCTGGGCGCCGGCTACCCCGGAACCCGAGCCGACCCCGACCCCGGAGCCCGAACCCGCCCCGTAGCACCCGGCCCACAAGGCCACGCCCCACCCGCACGCCCGCCCTCCGCGCGGGCTTTTTTCATGTCCGGAGGACACCAGATGGCCACTCCCCTCCCCGCGGACCGGCTCCTCGCCGCGCTCCGCGCCGAAGGCGTCACCGTCGTCGAGCACCCCGGCTGGCGCACCCACAACCGCAACCACACCGGCGCCTGGGGCCCGGTCAGCGGTGTGATGATCCACCACACCGTCTCCAGCGGCACCGCCTCCTCCGTCGAGATGTGCTTCAACGGCTACGCCGGCCTGCCCGGCCCGCTCTGCCACGGCGTCATCGCCAAGGACGGCACCGTCCACCTCGTCGCCAACGGCCGCGCCAACCACGCCGGCGGCGGCGACCCGTCCGTCCTCCGGGCCGTGGTCAGCGAGACGTACGGCGACCGGCCGCCCGCCCCGCGCGAACACCAGGGCAGCGGGGGCGCCGTCGACGGCAACTCCCGTTTCTACGGCTTCGAGTGCGTCAACCTCGGCAACGGCAGCGACCCCTGGCCGGCCGCCCAGCTCGACGCCATCGAACGGGTCTCGGCCGCCCTGTGCCGGGCCCACGGCTGGGGCGCCAAGTCCGTCATCGGCCACCTGGAGTGGTCCGACTGGAAGTCCGACCCCAAGGGCTTCGGCATGCCGACCCTGCGCCAGCGCGTCCAGGCCCGCCTCATGAAGGCCCCCGCCAAGAACACCCCCGGCAGCGGAAAGCCCGCCGCCCCCCGCCTCCAGCCGTTCCCGGGCGCCTCGTTCTTCCGCAAGGAGACGAGCTCCCCGGTCATCACGGCCATGGGCCGCCGACTCGTCGCCGAGGGCTGCTCCGCGTACACCGTCGGCCCCGGCCCCCGCTGGAGCGAGGCCGACCGGCTCAGCTACGCGAAGTGGCAGCACAAGCTCGGCTTCCGCGGCTCCGACGCCGACGGCCTCCCCGGCGCCGCGTCCTGGAGCGCGCTGAAGGTCCCGTACACGACCTGACCCACCCCACCACAGGAGTCCCCCGATGTCCGATGCCGCCAAGCGCACGGCCCGTACCGTCCTCCAGTCCGCCGTCGGCATCGCCGTCGTGCTCCCCGCGATCGTCGACGCCGCCGGCCTCCCCGAGACCCTCCCCTGGGTCGCCGGGGCACTGGCCGTCTCCGCCGGTCTCACCCGGGTGATGGCCCTCGACCTGGTGCAGGACCTGCTCCCGTCCTGGCTGCGCACCACCCACACCCCGGCCGAGGGCGGCGCCGATGACCGAGTCTGACCCGAACGACCCCGTCGCCGTCGCCCTCGAACTCGAACGGCTCCGCGGCACCCTGGAGGCCGGCTTCGCCCGGGTCGACGGCGCCCTCGCGCTGCTCGTGCAGCGCAGCGACCAGACTGACCGGCAGCTCGCCGACCACGAGGCTCGCCTCGACGACCTGGAACGCGCCCGCTGGCCCCTGGCCAGCATCGCCGCCCTCGCCGCGAGCGCCGGTGTGCTCGTCGCCGTCTGGGAGGTGGCGGCCCGCTAGCCGGACACGCCGAAGGGCGGCCACCCCGTGATCGGGGTGACCGCCCTTCGGTCTAAGCGACTCGCTTACTGGTTGTACGGACCGTAGTCGTAGTCCTCCAGCGGAACGGCCTGGCCGGAGCCCGAACCGAACGGCGAGTAGTCGATGTCGTCGTAGCCGACGGCCGAGTACATCGCGGCCTTGGCCTCCTCGGTCGGCTCGACCCGGATGTTGCGGTAGCGGGACAGACCCGTACCGGCCGGGATGAGCTTACCGATGATGACGTTCTCCTTGAGGCCGATGAGGCTGTCGGACTTGGCGTTGATCGCCGCATCCGTCAGAACTCGGGTCGTCTCCTGGAAGGACGCCGCCGACAGCCACGACTCGGTGGCGAGCGAGGCCTTGGTGATACCCATCAGCTGCGGACGGCCGGAGGCGGGGTGACCGCCCTCGGTGACCACACGACGGTTCTCGGTCTCGAACTTCGAGCGCTCGACGAGCTCGCCCGGCAGCAGCTCCGCGTCGCCGGACTCGATGATCGTCACACGGCGCAGCATCTGCCGGATGATGATCTCGATGTGCTTGTCGTGGATCGACACGCCCTGCGAGTTGTAGACCTTCTGGACCTCGGCGACCAGGTGGACCTGGACCGCACGCTGACCGAGGATGCGCAGCACGTCGTGCGGGTTGGTGGCACCCACGGTGAGCTTCTGGCCCACCTCGACGTGGTCGCCCTCGCCCACGAGCAGACGGGCACGCTTCGAGATCGGGAACGCCGTCTCGTCGGTGCCGTCGTCCGGGGTGACGACGATCTTCTTGGTCTTCTCGGTCTCCTCGATGCGGACGCGGCCGGCCGCCTCCGAGATCGGGGCGACACCCTTGGGCTGACGCGCCTCGAAGAGCTCGACGACACGCGGCAGACCCTGGGTGATGTCGTCACCGGCCACACCACCGGTGTGGAAGGTACGCATCGTCAGCTGGGTACCGGGCTCACCGATGGACTGGGCGGCGATGATGCCGACCGCCTCACCGATGTCCACCAGCTTGCCGGTGGCGAGCGAACGGCCGTAGCAGAACGCACAGGTACCGACGGCGGACTCACAGGTCAGGACCGAGCGGGTCTTGACCTCCTCGACACCGGCGCCCACGAGGGCGTCGATGAGCACGTCACCCAGGTCGACGTTGGCCGGCGCGATGACCTTGCCGTCGACGACGACGTCCTCGGCGAGCATCCGCGCGTACACGGAGGTCTCGACGTCGTCCGTCTTGCGCAGCACACCGTCGGCGCCGCGCTCGGCGATCCGCAGCTTCAGACCGCGCTCGGTGCCACAGTCCTCCTCGCGGATGATCACGTCCTGCGAGACGTCCACCAGACGACGGGTCAGGTAACCCGAGTCGGCGGTACGCAGGGCGGTGTCCGCCAGACCCTTACGGGCACCGTGCGTGGAGATGAAGTACTCCAGAACGGTGAGGCCCTCACGGAAGGACGCCTTGATGGGACGCGGGATCGTCTCGTTCTTGGCGTTCGACACCAGACCACGCATACCGGCGATCTGACGCATCTGCATCATGTTTCCTCGGGCACCCGAGTCGACCATCATGAAGATGGGGTTCGTCTTCGGGAAGTTCGCGTTCATCGCCTCGGCGACCTCGTTGGTCGCCTTGGTCCAGATCGCGATGAGCTCCTGAGTGCGCTCTTCCTTCGTGATGAGACCGCGCTCGTACTGCTTCTGGACCTTCTCGTCCTGCTCCTCGTAGCCCTTGACGATGGCCTTCTTGGCCTCGGGCACGACGACGTCGGAGATGGCCACGGTGACGCCGGAACGGGTCGCCCAGTAGAAGCCCGCCGCCTTCAGGTTGTCGAGCGTCGCCGCCACGATGACCTTGGGGTAGCGCTCGGCGAGGTCGTTGACGATCTCGGAGAGCTGCTTCTTGCCGACGGAGTAGTCGACGAAGGGGTAGTCCTCGGGCAGCAGCTCGTTGAAGAGCGCGCGGCCCAGCGACGTCCGCAGGCGGAACGAGTCACCCTGCTGCCACTCCGGCTCGCCCTCCTCGGTGACCGGGGGAACCCAGCCACGCGGAGCGACGGTGCCGACGGGGAAGCGGATGTCGATCTGCGACTGCAGCGCGAGCTCGCCGGCGTCGAACGCCATGATCGCCTCGGCCGTGGAGCCGAACGCGCGGCCCTCGCCCTTGGTGTCACGGAGCTCACCGTCGGTGGTCAGGAAGAACAGACCGAGGACCATGTCCTGGGTCGGCATCGTGACCGGACGGCCGTCGGCGGGCTTCAGGATGTTGTTCGAGGACAGCATCAGGATGCGGGCCTCGGCCTGCGCCTCCGCGGAGAGCGGCAGGTGCACGGCCATCTGGTCACCGTCGAAGTCCGCGTTGAACGCGGTGCAGACGAGCGGGTGGATCTGGATGGCCTTGCCCTCGACCAGCTGCGGCTCGAAGGCCTGGATGCCGAGGCGGTGCAGCGTGGGCGCACGGTTCAGCAGAACCGGGTGCTCGGCGATGACCTCTTCGAGGACGTCGTACACGACCGTGCGGCCGCGCTCGACCATCCGCTTGGCGCTCTTGATGTTCTGCGCGTGGTTCAGGTCGACCAGGCGCTTCATCACGAACGGCTTGAAGAGCTCCAGCGCCATGGCCTTCGGCAGACCGCACTGGTGCAGCTTCAGCTGCGGACCGACGACGATGACGGAACGCGCGGAGTAGTCCACACGCTTGCCGAGCAGGTTCTGACGGAAACGACCCTGCTTACCCTTCAGCATGTCGCTGAGGGACTTCAGCGGACGGTTGCCGGGGCCCGTAACCGGGCGACCACGACGGCCGTTGTCGAAGAGGGCGTCGACCGCCTCCTGGAGCATCCGCTTCTCGTTGTTCACGATGATCTCGGGGGCACCGAGGTCGAGCAGACGCTTCAGACGGTTGTTGCGGTTGATCACACGGCGGTACAGGTCGTTCAGGTCGGAGGTCGCGAAGCGGCCACCGTCCAGCTGCACCATCGGACGCAGGTCCGGCGGGATGACCGGCACGCAGTCGAGAACCATGCCCTTGGGGCTGTTCGCGGTCTGCAGGAACGCGGAGACGACCTTGAGGCGCTTGAGCGCACGGGTCTTCTTCTGGCCCTTGCCGGTACGGATGATCTCGCGGAGGCGCTCGGCCTCCTCCTCCAGGTCGAAGGACTCCAGGCGCTTCTGCAGCGCCGCGGCACCCATCGAACCGTCGAAGTACGTGCCGAAGCGGTCACGCAGCTCGCGGTAGAGGAGCTCGTCGCCCTCCAGGTCCTGGACCTTGAGGTTCTTGAAGCGCGACCAGACCTCGTCCAGACGGTCGATCTCGCGCTGCGCACGGTCGCGCAGCTGCTTCATCTCGCGCTCGGCACCCTCGCGCACCTTGCGGCGCACGTCGGCCTTGGCGCCCTCGGCCTCCAGCTCGCCGAGGTCGTTCTCGAGCTTCTTGGCGCGGGCCTCCAGGTCGGAGTCGCGACGGTTCTCGATCTGCTGGCGCTCGACGGAGACGTGCGCCTCCAGCGAGGGCAGGTCACGCGTACGACGCTCGTCGTCGACGTACGTGATCATGTACGCCGCGAAGTAGATGACCTTCTCCAGGTCCTTCGGGGCGAGGTCGAGCAGGTAGCCGAGGCGCGACGGAACGCCCTTGAAGTACCAGATGTGGGTGACGGGAGCGGCGAGCTCGATGTGGCCCATCCGCTCACGGCGCACCTTCGCGCGGGTGACCTCGACGCCACACCGCTCACAGATGATGCCCTTGAAGCGGACACGCTTGTACTTGCCGCAGTAGCACTCCCAGTCCCGGGTCGGACCGAAGATCTTCTCGCAGAAGAGTCCGTCCTTCTCGGGCTTGAGCGTGCGGTAGTTGATGGTCTCCGGCTTCTTGACCTCGCCGTGGCTCCACTGACGGATGTCGTCAGCGGTGGCCAGACCGATCCGGAGCTCGTCGAAGAAGTTGACGTCGAGCACTATGCGTCAATCCCTCTCAGGGTTGTAAGGCTTGGGGTCTGATACGGGGGTCCTGGGGCCGGCCGGGGACTCAGCGGTGAAACGCCGAGTCCCCGACCGAACTCCCGTCAGACCTCTTCGACGCTGCTCGGCTCGCGCCGGGACAGGTCGATGCCGAGCTCCTCCGCTGCGCGGAAGACGTCCTCGTCGGTGTCGCGCATCTCGATGGACATGCCGTCCGAGGACAGCACCTCCACGTTGAGGCACAGGGACTGCATCTCCTTGATGAGCACCTTGAAGGACTCGGGGATGCCGGGCTCAGGGATGTTCTCGCCCTTGACGATGGCCTCGTAGACCTTCACGCGGCCGGTCACGTCGTCGGACTTGATCGTCAGCAGCTCCTGGAGGGCGTAAGCGGCGCCGTACGCCTCCAGCGCCCACACCTCCATCTCACCGAAGCGCTGGCCACCGAACTGGGCCTTACCACCCAGCGGCTGCTGGGTGATCATCGAGTACGGGCCGGTCGAACGCGCGTGGAGCTTGTCGTCGACCAGGTGGTGCAGCTTGAGGATGTACATGTACCCGACGGAGATCGGGTCCGGGAACGGCTCGCCGGAGCGGCCGTCGAACAGCCTCGCCTTACCGGTCGGGAGCACCATGCGCTCGCCGTCGCGGTTCGGGATGGTGTGGTTGAGCAGACCCGCGAGCTCGTCCTCACGCGCACCGTCGAAGACCGGGGTGGCGACGTTGGTGCCGGGGGCGACCTTGTCGGCGCCGATCGCCTGGAGGCGCTGCGCCCACTCGTCCGCGAGGCCGGAGACGTCCCAGCCGCGGCTGGCGAGCCAGCCGAGGTGGATCTCCAGGACCTGTCCCGGGTTCATTCGGGACGGGACACCCAGCGGGTTGAGGATGATGTCGACCGGGGTGCCGTCCTCCAGGAACGGCATGTCCTCGATCGGCAGGATCTTCGAGATGACGCCCTTGTTGCCGTGACGGCCGGCGAGCTTGTCACCGTCGGTGATCTTGCGCTTCTGGGCGACGTAGACGCGGACCAGCTGGTTCACGCCCGGGGGAAGCTCGTCGCCCTCCTCGCGGTCGAAGACGCGGACGCCGATGATCTTGCCGATCTCGCCGTGCGGCACCTTCAGCGAGGTGTCACGGACCTCACGGGCCTTCTCACCGAAGATCGCGCGGAGCAGGCGCTCCTCCGGGGTCAGCTCGGTCTCGCCCTTGGGCGTGACCTTGCCGACCAGGATGTCGCCGGCGACGACCTCGGCACCGATCCGGATGATGCCGCGCTCGTCGAGGTCGGCGAGGACCTCCTCGGAGACGTTCGGGATGTCCCGGGTGATCTCCTCCGGGCCGAGCTTGGTGTCACGGGCGTCGACCTCGTGCTCCTCGATGTGGATCGAGGAGAGGACGTCGTCCTGCACGAGGCGCTGCGACAGGATGATCGCGTCCTCGTAGTTGTGACCCTCCCACGGCATGAACGCCACGAGCAGGTTCTTGCCGAGCGCCATCTCGCCGTCTTCGGTGGCGGGACCGTCGGCGAGGACCTGGCCCTCGATCACGCGGTCGCCCTCGTCGACGACGACCTTCTGGTTGACCGAGGTGCCCTGGTTCGAGCGGGAGAACTTGTGCAGGCGGTACGTGATGTACGTGCCGTCGTCGTTGGCGACCGTGATGTAGTCGGCCGACAGCTCCTGGACGACGCCGTCCTTCTCGGCCTTGAGCACGTCGCCGGCGTCGGTGGCGCAGCGGTACTCCATGCCGGTGCCGACGAGCGGGGCCTCCGACTTAATCAGCGGCACCGCCTGACGCATCATGTTCGCGCCCATGAGGGCACGGTTGGCGTCGTCGTGCTCGAGGAACGGGATCATGGCGGTCGCGACCGACACCATCTGGCGCGGCGAGACGTCCATGTAGTCCACGTCCGACGGCTCGACGTAGTCGACCTCGCCGCCACGCTTGCGGACCAGGACGCGGTTCTCGGAGAAGCGGAGCTCCTCGTCGAGCGCGGCGTTGGCCTGGGCGATGACGAAGCGGTCCTCCTCGTCGGCGGTGACGTAGTCGACCTCGTCGGTGACCTGGCCGTCGACGACCTTGCGGTACGGCGTCTCGATGAAGCCGAACGCGTTGACGCGGCCGTACGAGGCGAGCGAACCGATCAGACCGATGTTCGGGCCTTCGGGGGTCTCGATCGGGCACATGCGTCCGTAGTGGGACGGGTGCACGTCTCGGACCTCGAAGCCGGCCCGCTCACGGGACAGACCACCAGGGCCCAGCGCCGAGAGACGACGCTTGTGCGTCAGACCCGACAGCGGGTTGTTCTGGTCCATGAACTGGGACAGCTGGCTGGTGCCGAAGAACTCCTTGATGGAGGCGACGACCGGCCGGATGTTGATCAGGGTCTGCGGCGTGATCGCCTCGACGTCCTGGGTGGTCATGCGCTCGCGCACGACGCGCTCCATACGAGCCAGACCCGTGCGGACCTGGTTCTGGATGAGCTCGCCGACGTTGCGCAGACGACGGTTGCCGAAGTGGTCGATGTCGTCGGTCTCGACGACGATCTCGTTGCCGTTCTCGCCGATCGTCTCGGTCTCGCCCGCGTGGAGCTTGACCAGGTACTTGATCGTGGCGATGACGTCGTCGGTGGTGAGCACGCCGGCGTCCAGCGGCTCGTCCGCGCCGAGCTTCTTGTTCACCTTGTAGCGGCCGACCTTCGCGAGGTCGTAGCGCTTCGGGTTGAAGTAGAGGTTCTCGAGCAGCGTCTGAGCGGCCTCACGGGTCGGCGGCTCGCCCGGACGCAGCTTGCGGTAGATGTCGAGCAGCGCGTCGTCCTGGCCCTGGGTGTGGTCCTTCTCCAGGGTGGCGCGCATGGACTCGTACTCGCCGAACTCCTGGAGGATCTGCTCGGTGGTCCAGCCGAGAGCCTTGAGGAGGACGGTGACGGACTGCTTGCGCTTGCGGTCGATGCGGACACCGACCAGGTCGCGCTTGTCGATCTCCATCTCGAGCCAGGCACCCCGGGACGGGATGATCTTGGCGGAGAAGATGTCCTTGTCGGACGTCTTGTCGATGGAGGAGTCGAAGTAGACACCGGGCGAACGGACCAGCTGCGACACCACGACACGCTCGGTGCCGTTGATGACGAAGGTGCCCTTGTTCGTCATGAGCGGGAAGTCGCCCATGAAGACCGTCTGGGACTTGATCTCGCCGGTCTCGTTGTTGGTGAACTCGGCGGTGACGAAGAGCGGGGCGCCGTACGTGAAGTCACGGTCCTTGCACTCGTCGATCGAGTTCTTCGGCGGCTCGAAGCGGTGGTCGCGGAAGGTCAGCGACATCGACCCGGAGAAGTCCTCGATCGGCGAGATCTCCTCGAAGATCTCTTCCAGGCCGGACTTCGTGGGGACGTCCTGTCCCGACTCAAGAGCAGCCTCGACGCGAGCCTTCCAGGCGGCGTTGCCGAGCAGCCAGTCAAAGCTCTCGGTCTGCAGCGCGAGGAGGTTCGGAACCTCGAGGGGCTCCTTGATCTTTGCAAAGGAGATGCGCAGCGGGGCGGTGCTTGCGCCGTTGTTCGTATTGGTCGAGGCGTTGCGCGAGGCGGCCAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP029195|3333838:3352146|3343158_3344070_+|WP_150161572.1|DBSCAN-SWA
MATPLPADRLLAALRAEGVTVVEHPGWRTHNRNHTGAWGPVSGVMIHHTVSSGTASSVEMCFNGYAGLPGPLCHGVIAKDGTVHLVANGRANHAGGGDPSVLRAVVSETYGDRPPAPREHQGSGGAVDGNSRFYGFECVNLGNGSDPWPAAQLDAIERVSAALCRAHGWGAKSVIGHLEWSDWKSDPKGFGMPTLRQRVQARLMKAPAKNTPGSGKPAAPRLQPFPGASFFRKETSSPVITAMGRRLVAEGCSAYTVGPGPRWSEADRLSYAKWQHKLGFRGSDADGLPGAASWSALKVPYTT
>NZ_CP029195|3333838:3352146|3344327_3344591_+|WP_015035543.1|DBSCAN-SWA
MTESDPNDPVAVALELERLRGTLEAGFARVDGALALLVQRSDQTDRQLADHEARLDDLERARWPLASIAALAASAGVLVAVWEVAAR
>NZ_CP029195|3333838:3352146|3348663_3352146_-|WP_041662771.1|DBSCAN-SWA
MAASRNASTNTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEAALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYGAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSIDKTSDKDIFSAKIIPSRGAWLEMEIDKRDLVGVRIDRKRKQSVTVLLKALGWTTEQILQEFGEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETIGENGNEIVVETDDIDHFGNRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRVNAFGFIETPYRKVVDGQVTDEVDYVTADEEDRFVIAQANAALDEELRFSENRVLVRKRGGEVDYVEPSDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQELSADYITVANDDGTYITYRLHKFSRSNQGTSVNQKVVVDEGDRVIEGQVLADGPATEDGEMALGKNLLVAFMPWEGHNYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAEVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKIIGVRVFDREEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVDIILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAQRLQAIGADKVAPGTNVATPVFDGAREDELAGLLNHTIPNRDGERMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHHLVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFRAAEELGIDLSRREPSSVEEV
>NZ_CP029195|3333838:3352146|3344656_3348556_-|WP_015035542.1|DBSCAN-SWA
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQIENRRDSDLEARAKKLENDLGELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELLYRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVSAFLQTANSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGRTVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQMAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGEGRAFGSTAEAIMAFDAGELALQSQIDIRFPVGTVAPRGWVPPVTEEGEPEWQQGDSFRLRTSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWATRSGVTVAISDVVVPEAKKAIVKGYEEQDEKVQKQYERGLITKEERTQELIAIWTKATNEVAEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIAERGADGVLRKTDDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVGAGVEEVKTRSVLTCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEARQPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGTDETAFPISKRARLLVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVAEVQKVYNSQGVSIHDKHIEIIIRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLATESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEEAKAAMYSAVGYDDIDYSPFGSGSGQAVPLEDYDYGPYNQ
>NZ_CP029195|3333838:3352146|3338548_3339742_+|WP_150503708.1|DBSCAN-SWA
MNLRSSWVAETGQTREDTRLNQVGATTMINPVQVRSGILPGSYDGKWRLSGFWMDKASAMTATVSEGRAVIQGDISQGVYPVALPASEQVTFAAGDAQYGRIDLVVLKIYDNLYDGSTRNEAKVEIIRGVPGQAPQAPVAPPRSLPLYEVTVPAGASAGNGGIPWNTSLKDLRTPVVALGGILPVEGPVLPGAHPGQYQDTANNQLQRWDGGQWVAYPEAIGGIVPSSASTLTASYTGQYRDTPGGQLQRWNGSAWTPAVPGPYFVDNGDFGDTASTAYTPTLGGRATNPLTVNFVAPPSKAVAVSFGCKLRSGSPDHYAYMALKLTQGATVVNDLDDDYATIAASQHMVSVSTTRRYSNLTPGATYTLTAHFRVIANTLGLKGGFDNTYIKVDPLP
>NZ_CP029195|3333838:3352146|3336335_3337268_+|WP_015035552.1|DBSCAN-SWA
MAETTTTYAGSNLTADHAPGSLITQDGQIQWAGLLIGPGTPFNVDRTGLQGWEDLPEYDSSDADRPTSHGAWPGSRYAKPRKISGTIVLVPEWSQTAEAVRALRQALALLDEERWLTVRLHGELLAVRARIAQRVVPADQGFATQGSTKMSIQWLASDPRRYAVNEQSSSTTPPQPETGLTWLPNGLTWPLNWGQAKSTGDAVAENTGSAATHPVIVFRGPCSMPTVTERNSKRRLRYAIDLAAGDELVVDTAGGTVMLNNTASRRHTAMADSSPEELFLLEPGRTELSFRPDASTPEALMTIRWRSAEW
>NZ_CP029195|3333838:3352146|3344095_3344341_+|WP_150503716.1|DBSCAN-SWA
MSDAAKRTARTVLQSAVGIAVVLPAIVDAAGLPETLPWVAGALAVSAGLTRVMALDLVQDLLPSWLRTTHTPAEGGADDRV
>NZ_CP029195|3333838:3352146|3333838_3335044_+|WP_150503702.1|tail|DBSCAN-SWA
MAFTSSMKKASDSLRNLKTQASGAATSVKKVGDAGNSANGQLKNLKTGAQGSSTQLKNLKTASDQAEKSMTKAGRTAESAGTKMGKYESGAGKAAKGQDKLNKSMKGNFLARLIELFMPLIEKIVDMAMQSKTMQKVLKKAFDAVKTVISAVMKAIGPIMKKAGQLIKTVWNGIKKAISSVVKAVATVIKTYVNIWKTVITTVMKAIKTVVGAVWKGIKAVITPVVNWIKSAIPNAFRAVKDKMSSIWNGLKDIASRAFEGIKSGVSGPINAVIGMINRMIRAVNGVKVSVPGWVPLVGGKTFGVNIPTIPMLATGGVVMPRSGGVPAILAEAGEAEAVLPLSKLDRLLALTARRARMSAQLQGGKGGGGAGLHIEHYHAARNSDPQSTADALMYLAKARG
>NZ_CP029195|3333838:3352146|3337317_3338511_+|WP_150503706.1|DBSCAN-SWA
MTVRAAWLHSTGQTREDTRLALSALLTPNGQSAAETPLRSRPGIVPGGLVLTGASAMQCSIGAGRAVIQGSDTAQGAYMIAVTSPETLTIADGDPQYPRIDLIELAVLDDAYDRSGATDAVIRLVKGTPAATPVVPASGPGSAFPLYTVAVPAGTSAGTGGIAWTTAGVVTTLHYPMTALGGIIPTSGFKGAYVGQYRDVSGLLQRWDGTAWVSYPKPIGGIAPHGTMTTGGYTGQYRDNAGVLQRWDGAAWQYAEGKAAVLFSVSQTSMQSVPASTWTPITLQNVDIDDFTGWNGSDSFVVPRTGWWRVSGHVAWNGDSTTGVRGARITLGGVGVPRMTWLGPAATGAVTVGGQGLIKLTAGNVLQLAGYHNHTAAVRTLGGSGYYSNLSAQWIRS
>NZ_CP029195|3333838:3352146|3342670_3343081_+|WP_150503714.1|DBSCAN-SWA
MNIDPTEPWGVAIDYAGRAAVTEDGHTVDVRVYDNSLGHALQRDPVTGQYPAVYVTAEVTEKGTGDAVLRGSGLIIVDARDGAPVVPDPTSVQRAVTAALADFETRRAACAALCAAWAPATPEPEPTPTPEPEPAP
>NZ_CP029195|3333838:3352146|3340930_3342061_+|WP_150503712.1|DBSCAN-SWA
MAIETPYRAIFCDLLTDQTLDILPLRDVSFDDYIGKAGSLSGTVPIPDKAIADRVKKVREGRTAVYLERGGDLWWGGIVWTSTLQSSGRGVLTLGIQAATFDSYAGRRRIRTDITYDTPTDQLEIARRLWRELDVQTYPDAPAGEEPRRLGITFGNEIPKFQKTASWRKGDETVYLEALDQLAATENGFEHQILVYRDPVTGQRIRQLRIGEPKIVTGATDLVFDRPGVILSYSFPYDATRGGTTAVARGASTNANAAAESRPIFSGTQYASDLLVDGWPLIDLSSDHNEITDQLALDSVAATELAQARGAVVIPSISIHLGGIVPPALLGRVARIRITDEWYSQGLDARYRIIGVKITPPERGRADTAELYLEEA
>NZ_CP029195|3333838:3352146|3342060_3342630_+|WP_015035547.1|DBSCAN-SWA
MPQLPEDIIDRLNQMERRLKALSTAVNTRPAVNEFRPTPSESVTITRPLFRIFDGYNHEIFADDILTGGLARPWLQLMPPLASDPAKWPSTTAAAFTTIARCSNPIWQPKLRLAISTAASSGATGKVRVLVDSVPFGPAVTAGTTYDYLGLLPGDMKTRFGQTMNIEIQAQATGGTVYAQPVLIHGAQT
>NZ_CP029195|3333838:3352146|3339773_3340919_+|WP_150503710.1|DBSCAN-SWA
MPVRTGWLMPTGQTRQNTRVTLIGATTPVNPLAVRSGILPGTYDGKFRVGGLWMSSSGPMTATVYHGKAVIQGGTTDGAYPVALDEDITLTFADGDPLNDRIDLVVVRVYDNDVDALGKYEAVVEIVKGTPAAVPAAPAAPARSLVLFTVKVKKGASAGTGGIDWAGGAATDLRTTTVSAGGILPVYNNAGVPGGYPGQYQDNDNAHFLQRWDGTAWVAYPKEIGGIAPSGTIATGSYTGQYRDSGGGQLQRWNGSAWVAYQPPVEVETTNTGATALANWSLTSFAGRRTKGGLCTVTFLVTRTGAQVDANTAGNINDEPLCVLPAGWRPALDFETTGCDGFGSGGVVLSASSGQAVLRTWSSGGALVPGRNIRVSATYVL
>NZ_CP029195|3333838:3352146|3335040_3336288_+|WP_150503704.1|DBSCAN-SWA
MSAVAAFPNPFAGALPVMTSLRRGLGQAGDGLKRLREDTVRAGGGMNRFAAGLRTAAAPVRALGTGASGAAGSVRRIQRSRAVTGVRKIGTAAGRARTAAGRLGPAVGGILALLVPLLPVADVITGLMGTYGTVMTVASVAMTGINVAMRANPVGFLVGILVPVAAWLIEYAMQTETGQKIMRQVFQAALKGFQSVWAFLQPVLKLIGKAVGTYVKAYLTLFTSALKVIGSGISGISRVRTSVTSAANALRGIASRTIGGIKSAVKPVLSFVTERIPGFFRHAKDAVARALKGMGDLVKGALSAVLGVVKGPINGLIAFANWIIDGLNKLSVNILGKKFGVDIDKIPMLAEGGVVFPGADSAPRIDPLTVLEHRRVPALTEAPRRPHRIAEFHEEPGAGPRSTAEDLLFLVGAHC

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_150503702.1|3333838_3335044_+|tail	phage tail protein	Q8SBP1	Clostridium_phage	1.4e-09	44.6
WP_150503704.1|3335040_3336288_+	tape-measure protein	NA	NA	NA	NA
WP_015035552.1|3336335_3337268_+	hypothetical protein	A0A1J0MCE5	Streptomyces_phage	7.7e-53	43.1
WP_150503706.1|3337317_3338511_+	hypothetical protein	A0A1J0MCI7	Streptomyces_phage	1.1e-43	51.1
WP_150503708.1|3338548_3339742_+	hypothetical protein	A0A1V0E646	Streptomyces_phage	3.2e-43	43.6
WP_150503710.1|3339773_3340919_+	hypothetical protein	A0A1J0MCI7	Streptomyces_phage	2.2e-57	38.8
WP_150503712.1|3340930_3342061_+	hypothetical protein	A0A2H5BLE2	Streptomyces_phage	4.6e-84	45.0
WP_015035547.1|3342060_3342630_+	hypothetical protein	NA	NA	NA	NA
WP_150503714.1|3342670_3343081_+	ATP-binding protein	NA	NA	NA	NA
WP_150161572.1|3343158_3344070_+	N-acetylmuramoyl-L-alanine amidase	A0A2P1N078	Streptomyces_phage	4.3e-101	59.5
WP_150503716.1|3344095_3344341_+	hypothetical protein	A0A142K647	Streptomyces_phage	8.5e-20	69.3
WP_015035543.1|3344327_3344591_+	hypothetical protein	A0A1J0MCA5	Streptomyces_phage	2.8e-29	78.2
WP_015035542.1|3344656_3348556_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	6.5e-53	27.4
WP_041662771.1|3348663_3352146_-	DNA-directed RNA polymerase subunit beta	G8DH04	Emiliania_huxleyi_virus	2.0e-29	22.2

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP029195|6343290:6350462|DBSCAN-SWA
CATGAGCGATGCCACGCCCGCCCTCAAGCCCGCTCTCGAGGCCGTCCTGATGGTCGTCGACGAGCCCGCCACCGAGGCCCACCTCGCCAAGGTCCTGGAGCGCACCCCCCGCGAGGTCGCCGACGCCCTGCGCGAGCTGGCCGACGAGTACACCGTCCAGGGCCGCGGCTTCGAGCTGCGGCGGGTGGCCGGCGGCTGGCGCTACTACACCCGCGCCGAGCACGCCGCCGCCGTCGAGGCCTTCGTCCTGGAGGGCCAGCAGGCCCGGCTCACCCAGGCGGCCCTGGAGACGCTTGCGGTCGTCGCGTACCGCCAGCCGGTCAGCCGTTCCCGGGTCTCGGCGGTCCGCGGAGTCAACTGCGACGGCGTGATGCGCACCCTCCTCCAGCGGGGTCTGGTGGAGGAGACGGGCGCGGAACCCGAAACAGGTGCGATCCTGTACAGGACGACGAACTACTTCCTGGAGCGGATGGGCCTGCGCGGCCTGGACGAGCTCCCCGAGCTGGCTCCCTTCCTCCCCGAGGCGGAGGCGGTCGAACCGGACTCGCTGGAAGGGGTGCCGTCGTTCGATCCGGATGCACCGGATCGTGAGGACGACGACAAGACGGAAGTTTGATGCGAAGCAGCAGCGGCAGGAACAGCAGCGGAAACAACGGCGGGAGCCGTGGTGGCAACAGCGGCGGCCGCGGCGGCAGCAGCGGTGGCGGCCGCGGTGGCAGCGGCGCCGGCGGTGGCGGCTACCGGGGCTCCGGTGGCGGCAGCGGCAGTGGCGGCGGCCGGGGCGGCAGCGGCGGTGGCGGTGGCTACCGCGGCGGCAGCGGCTCCGGCGGCGGCGGTGGCTACCGCGGCGGCTCCGGTGGCGGTGGCTACCAGGGCGGCGGTGGCGGCTACCAGGGCGGCCGCGACGGCCAGAAGAGCCCGAGCAACCCGCGCCGGCCTCGCCCCGAGGAGCGCTCCTACGACGTGAGCCCCCCCTCCGAGGCCCCGAAGAAGGGTCGCGGCTCCGCGGCCCGTGGCGGCGCCAAGGGCGGCCCCAAGGCCCCGCAGGGCGGCATGCCGCCCCGTCGTGGGCCGCACGGCCAGCGGCAGGCCCCGGCCCGCTCCCGCGAGCTCGACGCCAAGATCGAGCAGCGCAACCGGGAGCGGTACGAGAACCGGCCCGAGATCAAGACCCCGAAGACCTTCCCCGGCGCCGAGCAGGAGGGCGAGCGACTGCAGAAGGTGCTCGCCCGGGCCGGCATGGGCTCGCGGCGCGCCTGCGAGGAGCTCATCGAGCAGGCCCGCGTCGAGGTCAACGGCGAGATCGTCCTGGAGCAGGGCAAGCGCGTCGACCCGGAGAAGGACGAGATCAAGGTGGACGGCCTGACCGTCGCCACCCAGTCGTACCTGTTCTTCGCGCTGAACAAGCCGTCCGGCGTGGTCTCCACCATGGAGGACCCGGACGGCCGCCAGTGCCTCGGCGACTACGTCACCAACCGCGAGACGCGCCTCTTCCACGTGGGCCGGCTCGACACGGAGACCGAGGGCATCATCCTGCTCACCAACCACGGTGAGCTGGCCCACCGCCTCACGCACCCGAAGTACGGCGTGAAGAAGACCTACCTGGCCGCCATCACCGGCCCGCTGCCCCGCGAGGTCGGCAAGCGGCTCAAGGACGGCATCCAGCTGGAGGACGGCTACGCCCGCGCGGACCACTTCCGCGTGGTCGAGCAGACCGGCAAGAACTACCTGGTCGAGGTCACGCTGCACGAGGGCCGCAAGCACATCGTGCGCCGCATGCTGGCCGAGGCCGGCTTCCCGGTCGAGAAGCTGGTGCGCACCGCGTTCGGCCCGATCGCCCTGGGCGACCAGAAGTCGGGCTGGCTGCGCCGTCTGACCAACACCGAGGTCGGCATGCTGATGAAGGAAGTCGGCATGTAAGGCCCCGCGCCGCAGGACGAGAGCCCGCGACCGCCACCCGGCGGTCGCGGGCTTCCGCGTTTCACGGGGCCCGCCGCCGTGCCTTTCGGGCTTGTGGCCCGGACCCCTCCGCCTTTATAGTCAGGATGACTCTTAAGGAGGCGGGCGTGAGCCTCGCAAGCATGCTGGAACCCCTGCAACAGCCGCTCTTCACCGTCCTGGACACCCCGGTCAGCTGGACCGAGGTGCTGGGATTCGGCAGCGGGGCGCTCTGCGTCTGGCTCGTCGCCCGTCAGCACCTCGCGAACTGGCCCATCGGCATCGCCAACAACCTGTTCTTCGTCCTGCTCTTCACGCAGGCGGGGCTCTACGCCGACGCCGGCCTCCAGATCGTCTTCATCGCCCTCGCCGTGTACGGCTGGTGGACCTGGACCCACGGGGGTGGACCAGGCTCCGACGCCCTCCCGGTGCGCCGCACCACGCGCACCGAGTGGGCGTGGCTCCTCACGGCGGGGGTGGTGGGGACCCTCGCCCTCACCCTGCTGCTCGACCGCGCCACCGACTCGACCGTCCCCTTCTGGGACGCCCTGACGACCGCGCTCTCCCTGATGGCGACCTACGGCCAGTGCCGCAAGCGGCTCGAGTCCTGGTGGCTGTGGATCGCCGCCGACGTCGTCTACGTACCGCTGTACGCCTACAAGGAGCTGTACCTGACGTCCCTGCTGTACGTCGGCTTCATGACGCTCTGCGTCATCGGCCTGCGCGGCTGGACCAGGGACCTCACCGCACGCCGGACCCTCCGGACGGAGATGGCGGCATGAAGCGCTACGGCCACGGCCTGGTCCTCGGCAAGTTCTATCCGCCGCACGCCGGCCACCACCACCTCGTCGACACCGCCCTCGACCGCTGCGAACGCCTCACCGTCCTCGTCTGCGCCTCCTCCGTGGAGAGCATCTCCCTGGAGGACCGGGTCGGCTGGATGCGCGAGGCCCACCCCGACGCCCTCGTCGTCGGCGCCGTCGACGACATCCCCGTCGACCTCCAGGACCCCGACGTCTGGGACGCCCACATGGCCGTCTTCCGGGCCGCCGTGCCCGAGCGCGTCGACGCCGTCTTCACCTCGGAGCCGTACGGGGATGAGCTCGCCCGCCGCTTCGGCGCCGAGTCCGTCTGCGTCGACCCCGGGCGGAACCGTTTCCCCGTCTCCGGCACCGCCGTCCGCGCCGACCCCGCTGCCTCTTGGGACTTCCTGACGCCGCCCGTGCGCTCCGCGCTCACCCGGCGCGTCGTCGTCCTCGGCGCCGAGTCCACCGGCACCACCACCATGGCCCTCGCCCTCGCCGACCACTACCGGCGGCGCGGCGGCGTATGGGCCCGCACCCGGTACGTACCGGAGTACGGGCGCGAGTACAGCGAACTCAAACTCGCCGAACTCCGCGCCGAACGCCCCGACGCCCAGTGGTCCGACGTCTCCTTCCACTCCGCCGACTTCCCCGTCATCGCCCAGCGCCAGGCCGAACTGGAGGAGGCGGCGGCCCGCGACGGCTCACCCGTCCTCTTCTGCGACACCGACGCCTTCGCCACCACCATCTGGCACGAGCGGTACATGGGCACCACCAGCCCCGCCACCGGCGAGATCGCCGCCCTCGGCCGGCAGCACCTCTGGCTGCTCACCGACCACCGGGGCGTCGACTTCGAGGACGACGGACTGCGCGACGGCGAGCACCTGCGCCCCTGGATGACCGCCCGCTTCCTCACCCAGCTCGCCCACACCGGACGCCGCACGGCCGTCCTCAGCGGACCCCACGAGGAGCGCCTCGCGGCCGCCGTCGCCGCCGTCGACGAACTCCTCGCCGAGGGCTGGCAGCTGGCCGACCCCCTGCCGGAACGCCGATGAACGCCGAGCCGGCGCCGGGACACGCGCCGCGCGCGGGGGGCGCTCCCGAGGGCTACGACCCGCACGCCTTCGAACCGTTCGCCGTCACCGTCGACCTCGCCGTCCTCACCGTCCGCGAGGACCGCCTCCACGTCCTGCTCGTTGAACGCGGCCAGGAGCCGTACGCCGGAACCTGGGCGCTCCCCGGCGGCTTCGTGCTGCCCCGCGAGTCCGCCGAGCGGGCCGCCCGCCGCGAACTCGCCGAGGAGACCGGCCTCTCCGGGACCACCGTCGCGGGACTCCACCTCGAACAGCTCCGCACCTACAGCGAGCCGGACCGCGACCCGAGGATGCGGGTCGTCTCCGTCGCCTTCGCCGCCCTCGTCCCCGACGCACCCGAACCGCGCGGCGGCTCAGACGCGGCGCAGGCCCGCTGGATGCCGTACGGGACGCACGGGCCGCTCGCCTTCGACCACGACCGCATCCTTGCCGACGCCCACGAGCGGGTAGGCGCAAAGCTGGAGTACACCTGCCTCGCGACCGCCTTCTGCCCGCCCGAGTTCACCCTCGGCGAGCTGCGGCAGGTCTACGAGACGGTCTGGGGCGTCGAGCTCGACCGCCCCAACTTCCGGCGCAAGGTCCTCACCACGCCCGGCTTCGTCCAGGCCGTGGAAGGACCGCCGCGCCTCACCGGCGGACGGGGGAAACCGGCCGCCCTGTACCGGGCGGGCGGGGCCACCACCCTGTACCCGCCCCTCCTGCGACCGGAAGGACGATCCACGTGAACCTCACCCGCACCGCCACCAAACAGGCCGCGACCGGCTCCCTGATCGGGCTGGCGCTCGGCGACGCGCTGGGGCGGCCCACCGAGTTCATCGACGTGCCGCGTGCCATCAGCTGGTACGGCCCGTGGCGGACGATGACACTTCCCGACCCCGCCCGAGTCACGGACGACACCCAGATGGCACTGGCCTTCGCCCGGGGCATCCGCACCGCGATGGACCGCGGCGTGCTCGCCCCGCTGCGACTCGTCCAGCCGGTCCGGGACGAGTTCGTCGACTGGTACCGGTCTCCGGAGAACAACCGAGCCCCCGGGCGCACCTGCATGGTCGCCTGCCAACACCTGACGCTCGACACGGCCTGGCAGGACGCCAGCCAGCTCGGCTCCAAGGGCTGCGGCGCCAACATGCGCGTCACGCCCGTCGGGCTCGTCCCCGGGCTCAGCGACGAGCAGCGGGCCGGCGCCGCCCAGCTCCAGGCGGCCCTGACCCACGGTCACCCCACCGCGCTCGCCGCCTCCGACCTCACCGCCCGCGCCGTCCACCTCCTCGCCCAGGGCGTGGAACCGGCCGGACTCGTCGGACAGCTGCGCTCCTACGCGTACGAGAACCGCTCCCACTACCACGAGAACTGGCTCGGCGACCTCTGGACCCGCTCCCAGGACCCGTCCGCCGAACACTTCGCCGAGCGCGGCTGGGACGAGTGCCTGGCCGTCCTGGAACGGCTCGACGCCGTCCAGCGCACGGCCGACCCGGAGCTCGACCCCTGTGCGTACACGGGGGACGGCTGGATCGCCGAGGAGGCCCTCGCGACCGGGCTCCTCTGCTTCCTCCGCTTCCCCGAGGAGCCGCTCACCGTGCTGCGCCGGGCGGCCTGCACCCGGGGCGACTCCGACTCGATCGCCGCCCTCGCGGGCGCCTTCGCCGGAGCCCACCTCGGCGCCGACGCCTGGCCCAAGGAGTGGGAGGAGCGGATCGAGTACCGGAGCGACCTGCTGACCTTCGGCGCGCTCTGGGACGCTTGACCCATGACGCTCTCCCTCGAGTCCGCCCTCGACGCCGACCTCGTCGCCGTCGTGGCCGAACAGCCCGACCCCCTGCTCTTCGCGACCGTCTCCGGCGCGCACCTGTACGGGTTCCCGTCCCGTGACTCGGACGTGGACCTGCGCGGAGCGCACCTGCTCCCGGTGGACGCCCTGATCGGGCTGCGTGAACCCGAGGAGACCCGCAGCCGGATGTGGGACCGGGACGGCGTCGAGATGGACCTCGTCACCCATGACCTGCGGAAGTTCGTACGGCTGATGCTGCGCCGCAACGGCTACGTCCTGGAGCAGCTCACCTCGCCGCTCGTGGCGCACACCACGGAGACCCACGCGGAGCTGGTCTCCCTCGTGCCCGAGGTGCTCACCCATCACCACGCCCACCACTACCGGGGCTTCGCCGGGACGCAGTGGCGGCTCTTCGAGCGCAGCGGTGAGCTCAAGCCGCTGCTCTACACCTACCGGGCGCTGCTCACCGGCATCCATCTGATGCGGGCGGGCGAGGTGCAGGCCCATCTGCCCACCCTGGTCGAGGAGGTGGCGGAGGCGCCCGCCCGGCTGCCCGACCTCGTCGCGGCGAAGGCGGCGGCGGAGCACGGGCTCGCGGAGGTGCCGGTCGAGGAGGTCCGCGCGGAGACCGAGGCCCTGCACGGCGTCCTCGACGAGGCGCAGGCGGCGTCAGGTCTGGGAGAGGCGGCGGTACGCGCCCACGACCTGCTGCACGATCTCGTCGTACGGGCCAGGCTGAAGGGCGGCTGCTAGAGCCGGCCGCTCGGACCGTGCCCGGGACCGGTCGCTCGGACCGTGCCCGGGGCGGGTCCCTCGGACCGCGCCAAGGGCCGGTCCCCGGGACCGCGCCGGACCCGGAAGCCGGGTCTCAGGGGAGCACGGCCGTCGCCGAGGCGCGGCGCGCGCGGATCAGGAAGTCCTGCACGCGCGCGTGGTCCGGCGTGGCCGGCAGCGGGGTCGCGTCGAGGGCGCGGTCGGCCTCGTCCTGGAGGCGGTTCATCCAGGACTCGACCTCGGGCCAGGGCACCTCGCCGCGCTTGACCGCGAGGAGGCGCTCGCGCTCCTCGCCGACGTCGATCCTCAGCTCGCCCGAGCGCAGCAGGTCCCGGCAGCTGGTCAGCAGCCGCAGCAGGTGCATGGCGTGCTTCCAGCGCGGGTGGCCGTACTGCCGGACGTCCGCGTCGAGCTTGCGGCGCTGGCCGCCGGCGTACCGCACGAAGGTCTGGTGGGCCTGCCGGGAGAGGAAGGCGCCGCGCAGCGAGAGCAGTTCGCGCCCGAGGTCGTCGACGTGCCGGACGACGGGGGAGTGGAGGCACTCCAGGACGTTCGGGTTGTTGCGCAGGGCCAGTTCGCAGAAGCGTTCCAGCTCCCAGCTGAACTGCTCCTCGCCCGGCCCCTCCACATGGGCGGGGGGCTTGTCGAAGTGCCAGAACAACGGCGTCGGGGCGAGGTAGACGCCCCGGACGTCCGTGTCGCTTTCCTCGGTGGCGAGACCGAAGGCGCGCGAGCCCATGACACAGGAGTAGATCGTGTGTGCGCTCACCAGCTCGTCCGGAGTCATGGCGGTCAG

Protein sequences of DBSCAN-SWA_2

>NZ_CP029195|6343290:6350462|6346005_6347085_+|WP_150507089.1|DBSCAN-SWA
MKRYGHGLVLGKFYPPHAGHHHLVDTALDRCERLTVLVCASSVESISLEDRVGWMREAHPDALVVGAVDDIPVDLQDPDVWDAHMAVFRAAVPERVDAVFTSEPYGDELARRFGAESVCVDPGRNRFPVSGTAVRADPAASWDFLTPPVRSALTRRVVVLGAESTGTTTMALALADHYRRRGGVWARTRYVPEYGREYSELKLAELRAERPDAQWSDVSFHSADFPVIAQRQAELEEAAARDGSPVLFCDTDAFATTIWHERYMGTTSPATGEIAALGRQHLWLLTDHRGVDFEDDGLRDGEHLRPWMTARFLTQLAHTGRRTAVLSGPHEERLAAAVAAVDELLAEGWQLADPLPERR
>NZ_CP029195|6343290:6350462|6348871_6349645_+|WP_150507095.1|DBSCAN-SWA
MTLSLESALDADLVAVVAEQPDPLLFATVSGAHLYGFPSRDSDVDLRGAHLLPVDALIGLREPEETRSRMWDRDGVEMDLVTHDLRKFVRLMLRRNGYVLEQLTSPLVAHTTETHAELVSLVPEVLTHHHAHHYRGFAGTQWRLFERSGELKPLLYTYRALLTGIHLMRAGEVQAHLPTLVEEVAEAPARLPDLVAAKAAAEHGLAEVPVEEVRAETEALHGVLDEAQAASGLGEAAVRAHDLLHDLVVRARLKGGC
>NZ_CP029195|6343290:6350462|6343904_6345209_+|WP_150507085.1|DBSCAN-SWA
MRSSSGRNSSGNNGGSRGGNSGGRGGSSGGGRGGSGAGGGGYRGSGGGSGSGGGRGGSGGGGGYRGGSGSGGGGGYRGGSGGGGYQGGGGGYQGGRDGQKSPSNPRRPRPEERSYDVSPPSEAPKKGRGSAARGGAKGGPKAPQGGMPPRRGPHGQRQAPARSRELDAKIEQRNRERYENRPEIKTPKTFPGAEQEGERLQKVLARAGMGSRRACEELIEQARVEVNGEIVLEQGKRVDPEKDEIKVDGLTVATQSYLFFALNKPSGVVSTMEDPDGRQCLGDYVTNRETRLFHVGRLDTETEGIILLTNHGELAHRLTHPKYGVKKTYLAAITGPLPREVGKRLKDGIQLEDGYARADHFRVVEQTGKNYLVEVTLHEGRKHIVRRMLAEAGFPVEKLVRTAFGPIALGDQKSGWLRRLTNTEVGMLMKEVGM
>NZ_CP029195|6343290:6350462|6349760_6350462_-|WP_150507097.1|DBSCAN-SWA
MTAMTPDELVSAHTIYSCVMGSRAFGLATEESDTDVRGVYLAPTPLFWHFDKPPAHVEGPGEEQFSWELERFCELALRNNPNVLECLHSPVVRHVDDLGRELLSLRGAFLSRQAHQTFVRYAGGQRRKLDADVRQYGHPRWKHAMHLLRLLTSCRDLLRSGELRIDVGEERERLLAVKRGEVPWPEVESWMNRLQDEADRALDATPLPATPDHARVQDFLIRARRASATAVLP
>NZ_CP029195|6343290:6350462|6343290_6343905_+|WP_015032608.1|DBSCAN-SWA
MSDATPALKPALEAVLMVVDEPATEAHLAKVLERTPREVADALRELADEYTVQGRGFELRRVAGGWRYYTRAEHAAAVEAFVLEGQQARLTQAALETLAVVAYRQPVSRSRVSAVRGVNCDGVMRTLLQRGLVEETGAEPETGAILYRTTNYFLERMGLRGLDELPELAPFLPEAEAVEPDSLEGVPSFDPDAPDREDDDKTEV
>NZ_CP029195|6343290:6350462|6347845_6348868_+|WP_150507093.1|DBSCAN-SWA
MNLTRTATKQAATGSLIGLALGDALGRPTEFIDVPRAISWYGPWRTMTLPDPARVTDDTQMALAFARGIRTAMDRGVLAPLRLVQPVRDEFVDWYRSPENNRAPGRTCMVACQHLTLDTAWQDASQLGSKGCGANMRVTPVGLVPGLSDEQRAGAAQLQAALTHGHPTALAASDLTARAVHLLAQGVEPAGLVGQLRSYAYENRSHYHENWLGDLWTRSQDPSAEHFAERGWDECLAVLERLDAVQRTADPELDPCAYTGDGWIAEEALATGLLCFLRFPEEPLTVLRRAACTRGDSDSIAALAGAFAGAHLGADAWPKEWEERIEYRSDLLTFGALWDA
>NZ_CP029195|6343290:6350462|6347081_6347849_+|WP_150507091.1|DBSCAN-SWA
MNAEPAPGHAPRAGGAPEGYDPHAFEPFAVTVDLAVLTVREDRLHVLLVERGQEPYAGTWALPGGFVLPRESAERAARRELAEETGLSGTTVAGLHLEQLRTYSEPDRDPRMRVVSVAFAALVPDAPEPRGGSDAAQARWMPYGTHGPLAFDHDRILADAHERVGAKLEYTCLATAFCPPEFTLGELRQVYETVWGVELDRPNFRRKVLTTPGFVQAVEGPPRLTGGRGKPAALYRAGGATTLYPPLLRPEGRST
>NZ_CP029195|6343290:6350462|6345355_6346009_+|WP_150507087.1|DBSCAN-SWA
MSLASMLEPLQQPLFTVLDTPVSWTEVLGFGSGALCVWLVARQHLANWPIGIANNLFFVLLFTQAGLYADAGLQIVFIALAVYGWWTWTHGGGPGSDALPVRRTTRTEWAWLLTAGVVGTLALTLLLDRATDSTVPFWDALTTALSLMATYGQCRKRLESWWLWIAADVVYVPLYAYKELYLTSLLYVGFMTLCVIGLRGWTRDLTARRTLRTEMAA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015032608.1|6343290_6343905_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.4e-09	29.4
WP_150507085.1|6343904_6345209_+	pseudouridine synthase	NA	NA	NA	NA
WP_150507087.1|6345355_6346009_+	nicotinamide mononucleotide transporter	A0A0F6YPU8	Sinorhizobium_phage	2.9e-14	31.2
WP_150507089.1|6346005_6347085_+	AAA family ATPase	I7K2N1	Yersinia_phage	2.0e-28	30.8
WP_150507091.1|6347081_6347849_+	NUDIX domain-containing protein	A0A0E3JJF3	Streptomyces_phage	2.9e-21	46.7
WP_150507093.1|6347845_6348868_+	ADP-ribosylglycohydrolase family protein	NA	NA	NA	NA
WP_150507095.1|6348871_6349645_+	nucleotidyltransferase domain-containing protein	K4K696	Caulobacter_phage	1.4e-07	37.1
WP_150507097.1|6349760_6350462_-	nucleotidyltransferase	G3M9V9	Bacillus_virus	1.6e-15	27.9