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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP031599 Roseovarius indicus strain DSM 26383 plasmid pRIdsm_01, complete sequence 0 crisprs WYL 0 0 1 0
NZ_CP031598 Roseovarius indicus strain DSM 26383 chromosome, complete genome 3 crisprs csa3,cas3,WYL,DEDDh 0 0 6 0
NZ_CP031602 Roseovarius indicus strain DSM 26383 plasmid pRIdsm_04, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP031601 Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence 0 crisprs NA 0 0 10 0
NZ_CP031600 Roseovarius indicus strain DSM 26383 plasmid pRIdsm_02, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP031599
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 51037 : 101740 44 Acidithiobacillus_phage(60.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP031598
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031598_1 2813306-2813403 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031598_2 2869357-2869480 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031598_3 2911994-2912106 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1670454 : 1735296 54 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_2 1738695 : 1793485 50 Acidithiobacillus_phage(22.22%) terminase,transposase,integrase attL 1734535:1734552|attR 1780617:1780634
DBSCAN-SWA_3 2641241 : 2675456 47 Salmonella_phage(11.11%) terminase,portal,head,capsid,integrase,tail attL 2632581:2632595|attR 2647090:2647104
DBSCAN-SWA_4 3828758 : 3848460 22 Acidithiobacillus_phage(40.0%) tRNA,transposase,integrase,protease attL 3833370:3833384|attR 3855909:3855923
DBSCAN-SWA_5 4184859 : 4195307 9 Escherichia_phage(28.57%) NA NA
DBSCAN-SWA_6 4897599 : 4916688 27 Rhodobacter_phage(12.5%) terminase,protease,portal,capsid,head,integrase,tail attL 4897554:4897571|attR 4915025:4915042
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP031600
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2946 : 61930 55 Planktothrix_phage(40.0%) transposase,integrase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP031601
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 5294 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_2 11353 : 13261 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_3 21742 : 25766 5 Caulobacter_phage(66.67%) NA NA
DBSCAN-SWA_4 30614 : 32535 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_5 36631 : 37183 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_6 54808 : 60042 3 Ruegeria_phage(50.0%) NA NA
DBSCAN-SWA_7 65188 : 67927 2 Phaeocystis_globosa_virus(50.0%) NA NA
DBSCAN-SWA_8 75003 : 76146 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_9 87952 : 88645 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_10 95116 : 144495 54 Bacillus_phage(20.0%) integrase,protease,transposase attL 132202:132215|attR 142652:142665
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage