CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP038216	Burkholderia pseudomallei strain Yap7 chromosome 1, complete sequence	3 crisprs	DinG,RT,csa3,DEDDh,cas3,WYL	3	3	7	0
NZ_CP038217	Burkholderia pseudomallei strain Yap7 chromosome 2, complete sequence	1 crisprs	csa3,DinG,cas3	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP038216_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038216_1

82187-82342

Orphan

Consensus_repeat	Method
CGGCGGCGGTGGCGGCGG	CRT

3 spacers

The CRISPR arrays of NZ_CP038216_1

>merge|NZ_CP038216|1|82187-82342|CRT
GGGCGGCGGTGGCGGCGGAGGCGGTGACGACGGTGGCTACGGTGGTGGCGGCGGCGGTTACGGCGGCGGCCGGGACATGGAGCGCGGCGGCGGTGGCGGCCGTGCGTCGGGTGGCGGCGGCGCGGGTGCGCGCAGCGGCGGCGGCGGTGGCGGCGC

>NZ_CP038216|1|1|82187-82342|CRT
GGGCGGCGGTGGCGGCGG	AGGCGGTGACGACGGTGGCTACGGTGGTGG
CGGCGGCGGTTACGGCGG	CGGCCGGGACATGGAGCG
CGGCGGCGGTGGCGGCCG	TGCGTCGGGTGGCGGCGGCGCGGGTGCGCGCAGCGG
CGGCGGCGGTGGCGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038216.1\|WP_004522852.1\|73478_74093_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP038216.1\|WP_150976769.1\|89194_95278_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377060
NZ_CP038216.1\|WP_004526089.1\|98538_98754_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004522845.1\|85361_85613_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004522840.1\|88976_89198_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_024428875.1\|83592_85173_+\|hydrolase	unknown	unknown	gnl\|CDD\|293817
NZ_CP038216.1\|WP_011204814.1\|76159_77194_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223701
NZ_CP038216.1\|WP_004534090.1\|74105_74963_+\|DUF4743-domain-containing-protein	unknown	unknown	gnl\|CDD\|239648
NZ_CP038216.1\|WP_004200144.1\|73354_73492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004534114.1\|86557_88324_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP038216.1\|WP_004526088.1\|95299_98566_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375703
NZ_CP038216.1\|WP_004526066.1\|77463_80331_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP038216.1\|WP_024428876.1\|82517_83249_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489
NZ_CP038216.1\|WP_004195194.1\|77344_77458_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004195190.1\|80544_81732_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341025
NZ_CP038216.1\|WP_004526080.1\|83302_83542_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004522854.1\|70728_72738_+\|sodium/hydrogen-exchanger-family-protein	unknown	unknown	gnl\|CDD\|235131
NZ_CP038216.1\|WP_004522844.1\|85785_86103_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004522850.1\|75014_75896_+\|formyltetrahydrofolate-deformylase	unknown	unknown	gnl\|CDD\|235676
NZ_CP038216.1\|WP_004534111.1\|72821_73385_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028

Protein	Function_ID	Function_description	E-value
NZ_CP038216.1\|WP_004522852.1\|73478_74093_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	1.98521e-42
NZ_CP038216.1\|WP_150976769.1\|89194_95278_-\|hypothetical-protein	gnl\|CDD\|377060	pfam03534, SpvB, Salmonella virulence plasmid 65kDa B protein.	8.78138e-17
NZ_CP038216.1\|WP_004526088.1\|95299_98566_-\|hypothetical-protein	gnl\|CDD\|375703	pfam18276, TcA_TcB_BD, Tc toxin complex TcA C-terminal TcB-binding domain. This domain is found in the C-terminal region of the Tc toxin TcA, present in Photorhabdus luminescens. Tc Toxin complexes bind to the cell surface, are endocytosed and perforate the host endosomal membrane by forming channels that translocate toxic enzymes into the host. This domain is responsible for binding to toxin TcB. Binding of TcA to TcB/TcC opens the beta-propeller gate.	1.37036e-29
NZ_CP038216.1\|WP_024428875.1\|83592_85173_+\|hydrolase	gnl\|CDD\|293817	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes proteins required for natural transformation competence including Neisseria gonorrhoeae ComA, Pseudomonas stutzeri ComA, Bacillus subtilis ComEC (also known as ComE operon protein 3) and Haemophilus influenza ORF2 encoded by the rec-2 gene, as well as Escherichia coli YcaI which does not mediate spontaneous plasmid transformation on nutrient-containing agar plates. It also includes the phosphorylcholine esterase (Pce) domain of choline-binding protein e from streptococcus pneumonia. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	1.79235e-05
NZ_CP038216.1\|WP_011204814.1\|76159_77194_-\|hypothetical-protein	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	7.55219e-14
NZ_CP038216.1\|WP_004534090.1\|74105_74963_+\|DUF4743-domain-containing-protein	gnl\|CDD\|239648	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belong to this superfamily requires a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	6.68298e-81
NZ_CP038216.1\|WP_004526066.1\|77463_80331_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP038216.1\|WP_024428876.1\|82517_83249_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	7.39363e-48
NZ_CP038216.1\|WP_004195190.1\|80544_81732_+\|MFS-transporter	gnl\|CDD\|341025	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.31309e-122
NZ_CP038216.1\|WP_004534114.1\|86557_88324_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	3.38077e-17
NZ_CP038216.1\|WP_004522854.1\|70728_72738_+\|sodium/hydrogen-exchanger-family-protein	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	1.57079e-95
NZ_CP038216.1\|WP_004522850.1\|75014_75896_+\|formyltetrahydrofolate-deformylase	gnl\|CDD\|235676	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed.	0
NZ_CP038216.1\|WP_004534111.1\|72821_73385_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	4.14923e-93

>NZ_CP038216.1|WP_004195190.1|80544_81732_+|MFS-transporter
MSNPSATSTRMSAPELRATTSLAAIFALRMLGLFMIMPVFSVYAKTIPGGENVVLVGIALGAYGVTQSLLYIFYGWASDKFGRKPVIAAGLLIFALGSFVAAFAHDITWIIVGRVIQGMGAVSSAVLAFIADLTSEHNRTKAMAMVGGSIGMSFAVAIVGAPIVFHWVGMSGLFAIVGALSVAAIGVVLWVVPDAPRPVHVPAPFAEVLHNVELLRLNFGVLVLHATQTALFLVVPRLLVDGGLPVASHWQVYLPVMGLAFVMMVPAIIVAEKQGRMKPVLLGGIAAILIGQLLLGVATHTILIVAAILFVYFLGFNILEASQPSLVSKLAPGSRKGAATGVYNTTQSIGLALGGVVGGVLLKHGGPDTVFFACSALVAVWLIIAAGMKQPPRKA
>NZ_CP038216.1|WP_004526066.1|77463_80331_-|excinuclease-ABC-subunit-UvrA
MEQIRIRGARTHNLKNVNLDLPRHKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYCPDHEIPLEAQSVSQMVDAALALPEETRLMILAPVVANRKGEHAELFDEMQAQGFVRFRVRSGGGAANEGAAKIYEVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADGRAIALEMDTDREHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPKRVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAFEDLPEKIRKILLYGSGKQTIPFSYINERGRTTIREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPSCDGTRLRREARFVRVGQGDYARAIFEVSSWPLRDALGYFDGLTLDGAKREIADKVIKEIVARLTFLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLKHLRDLGNSVIVVEHDEDMIRTADYVVDMGPGAGEHGGMIVAEGTPKQVQANGDSLTGQYLVGKRTIEYPDERISPDPQRMLRIVDAHGNNLKHVDLDLPVGLLTCITGVSGSGKSTLINDTLYNAVARHLYGSATEPAPHESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPASKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKRYNRETLEVQYKGRNISEVLDMTVEHAYEFFSAVPVVARKLKTLLDVGLGYIRLGQSATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEHNLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAKTKASFTGKYLAPLLKRKK
>NZ_CP038216.1|WP_004195194.1|77344_77458_-|hypothetical-protein
MRPAGRAPGGRPGRAWIARRRASVRRRCGAKIFLTTS
>NZ_CP038216.1|WP_011204814.1|76159_77194_-|hypothetical-protein
MRSVRLTSDFSLPKLSAIEIGSYLLALFGLWLVLHLKLLGGLLAGLLVYQLVHMIAPAIERHMSSQRARWVAVVLLSTAIVGGLAGLTIAVIEHFEHTVPNAQNLLGQVMQIVDQARTRTPEWISNLLPVDAEQMRAKAAGLMNRHMDQLQQGGKSVARGFGHVLFGMIIGAMIAIGIDRHKLRQPLSTALVARISRFSDAFRRIVFAQIKISALNAFFTAIYLLVALPIFHQRLPLSKTLVLVTFIAGLLPVVGNLISNTLIVAVSLSVSMGTAIASLVFLVVIHKLEYFLNAKIIGGQIESRAWELLLAMLVMEAAFGVPGVIAAPIFYAYVKRELIYLRLI
>NZ_CP038216.1|WP_004522850.1|75014_75896_+|formyltetrahydrofolate-deformylase
MPADHSFILKLSCPDRRGIVHAVSGFLLERGSNILDSAQFGDSRTGEFFMRVHFEQAGACGAAAALDALRAEFAPLAEAFAMRWELHDAAVKPRVVILVSKIGHCLNDLLFRYRTGQLPIEISAIVSNHKDFYQLAASYDIPFHHLPLAAGASADAKAAQEARVLEVIDGHAADLVVLARYMQILSPALCERLAGRAINIHHSFLPSFKGAKPYYQAFDRGVKLIGATAHYVTTDLDEGPIIEQEVERVDHSMTPDELTAVGRDVECVTLARAVKWHVEHRIVLNGTKTVVFR
>NZ_CP038216.1|WP_004534090.1|74105_74963_+|DUF4743-domain-containing-protein
MTFACIAAARRFDAAAHVPFAIAGRQVGWLRRGDVARLARWPDVFEFPAGRVELAARYDSVDARSMALASPIGALAAEGAIVGWRDEIYAIRNRFDDPPLAYIERAASRFFGTMTYAVHLNGIVEYAPSAPLAMWLGRRSATKATDPGMLDNVVAGGIGWGLGIEDTIAKECWEEAGIAAELAARAIPGRVAHVLRSLPEGTQAEQIFVYDLPLPRDFVPHNQDGEVAEHLLAGVDEIVAWLRAGEATVDASLAMLDSLLRHRAIAAEDARGIDVLFAPPPPGLG
>NZ_CP038216.1|WP_004522852.1|73478_74093_+|LysE-family-translocator
MPNFMLFLATSIAITVAPGPDNLQVLARGISQGRAAGLVAALGFASGVLFHTTLAAFGVAALLRSSPVAFHLLKLAGGAYLIWIGIKALRSKGLATAHARAPQPLSTIFRQSVIGNLLNPKVTLFFVVFLPQFVDPHGAQPVALQMLELGALFMAQTAVVFSVFGVGAGAIGVWLKRRPRVGVWLDRLAGATFVALGLRVALKD
>NZ_CP038216.1|WP_004200144.1|73354_73492_-|hypothetical-protein
MKFGIVGSLESVAEWTAPGAGAARNRARRPARGRRAQCPGNSVTV
>NZ_CP038216.1|WP_004534111.1|72821_73385_+|adenine-phosphoribosyltransferase
MMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDAKLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSALLRGAGLPLYTVTEFPGH
>NZ_CP038216.1|WP_004522854.1|70728_72738_+|sodium/hydrogen-exchanger-family-protein
MISPLEMTLLLLLASVVGVVVFRSLNLPPMLGYLTVGILVGPHALGFAADLERAEHLAEFGVVFLMFSIGLEFSLSKLRAMRRLVFGLGLAQVLGTIAIALVLGALFERWMHITWEGSVALGGALAMSSTAIVSKMLAERLEIETEHGRNIFGVLLFQDLAVVPLLIVIAAFGGESSKDLAMSLGFAAVKIVVALALLLIVGQRFMTRWLNVVARRRSQELFVLNLLLVTLGAAFITDRFGLSLALGAFIAGMLISETPYRHQVEEDIKPFRDVLLGLFFVTTGMLLDPSVIWRHPLLVLAFFVGQVLLKSVMITGLARAFGATPGVAMRTGLGLAQAGEFGFVLLNLILDRHLVDATLLQSILASMLLSMLAAPFLIQNADRIVMRLSAAEWMQQSLQMTRIATQSIKQKGHVIICGYGRAGQNLARMLEQEGIAYVALDLDPDRVTAAAAAGESVVFGDAARRESLLAAGIHRAAAVAVTYANTPSALRVLHNVHELEPTLPAIVRTVDDADLEKLLAAGATEVIPEIVEGSLMLASHTLVLMGVPMRRVVRRVEEMRDARYSLLRGYFHGADDADDDDHEQVRLQSVPVDARADAVGRSLSELGLFALGLEVTAIRRHGIRGVEPDPETKLRASDIVVLRGLPEALAQAEERLSRHRREGGSAAVA
>NZ_CP038216.1|WP_024428876.1|82517_83249_-|dienelactone-hydrolase-family-protein
METRSIAYDCGGARLTGYFADDAPNTKKPAVLIAHEAFGLNEHIRARARRLAELGYAAFALDMYGAEGFPMPEAIRRHIELMSTPGLMHARASAALSVLMEQPGVDRERVAAIGFCQGGISALELARGGAPIRCAVGFHPGLMRPAGSQDGPIRAKVLMMIGARDPDVPAADQAAFAAEMQEKQVDWQLHLFGGVGHAYTNPDADGWNKPGYGYSRAADQRAWTMMLALFDEVLGGAAAVGKA
>NZ_CP038216.1|WP_004526080.1|83302_83542_-|hypothetical-protein
MLATRFQFFRRFFSVTFPVTRPRAMNRCNCAAPREVRVCRKRDVSKTETISMAKPAERRGRSSRFPACAASTRRGGEFS
>NZ_CP038216.1|WP_024428875.1|83592_85173_+|hydrolase
MNPFFGAQREWQDVPVPARAYARLDNLHLPHADAPDRRAALRFDLIDADWLDDQAGADNPLFDLGRPHRMRAAWKRWFAAARGGDADDPFRAAPLYVLEVSVPFDAREWRKRLGLTREAMANDAHGEILAAFRRRWYELTVLREADARAGAMLGLLHRGIADEGLRVCCFAALAPAAHAAGLTALGTLAGSPALTSASLKPLVRDVRATYLGVYDVGQANANALLGGIRGRDLHGVVRHGVFPALYFDLGMPLQSQRHTAPSNVRFCFTAEPPIVLSHWHDDHLGGVALPTAAGCPTSQQMDWIVPDYSLATRHKALVTAIWAAGGSVHVFSASPAGRRLQAATASGHLLTLTRGTARDPNNGGIVMQVSSAQQQARRFADPPRSWLLPGDCDYKHFPSTFTPTNVIALVAPHHGADLGKGSVPVPPAAGGYLRLVYSFGRDNKYQHPRQGFVDAHHAAGWTHPVVPATGAITCVSGDDVRTTNVHSPWPAKPRGVLVGWSKAPHSIPACTLGGGATNCTLPLAKV
>NZ_CP038216.1|WP_004522845.1|85361_85613_-|hypothetical-protein
MRLIEPNEHAGYLAALHARGLSGNEFTLRETDTTDPKGDENIGQTGFVTITRHSTHATREYPLGDAGDWLQHFKKDLEAGAFD
>NZ_CP038216.1|WP_004522844.1|85785_86103_-|hypothetical-protein
MIAPDPESTFRGLPLTPEQNAEVMHYIKVRTQRGLPWDTPELEAMIRDMMLPPEDEAADSDFLSDEARAVAERAMSSVEDEMDPIEAREEWRAAMEAENMKGLRR
>NZ_CP038216.1|WP_004534114.1|86557_88324_-|DUF262-domain-containing-protein
MSELASQPTSIQSVYAMYREDKLFVNRRYQRKLVWTLEEKQRLIESIVNRYPIPAILIAERKSGDGYEIIDGLQRLHAIVSFIETGFSTLDGNYFDVKHFPTAKANADAGLFSIADTRNWIGQKDVSAVLDYTLALSVMRNATDDEVNDVFGRINTYGHRLSDQERRQAGVENEFSQMVRLIACGVRGDASADILPLKSMPSISIDLPMVKHGYEVKADEVVWVEQGVLRSTDLRDSMDEQCIADIATCIVGGQLIERSKDALDAVYDSTTAESERVNNALEVYGADKFSQEFKYCLDQILTVCNADGQAKLRNIIFTKGTTNAFPAVFAIILVAFHELTVKDGMVISDHSAVKKGLTGLSNRIDTSRGATSPAERRKNIDTVKGLIVGGFVKADVAKLIYGNHATVDIESTIRRSEIELSDYELKQGMLMLSDDRKIDDALIEKVLKTLCAIANNGPQRDGKVLIGVTDKEADAARVKQLDGIEPKKVGKRYVVGVVREAKVLGLSVEDYYTMWKDAIKKSPLSPLLRDSILSHIDYNSFYGLGVIVFTVPPQKELSYYEDDVYWRNGDSTEIAATAKHVAGLAQRF
>NZ_CP038216.1|WP_004522840.1|88976_89198_-|hypothetical-protein
MRIAADQIAADRLSYARSRVRSVSGACVWISRGMARPHVKDRTESACRRGRFDPGQRRCRFDAPMRLRAERDS
>NZ_CP038216.1|WP_150976769.1|89194_95278_-|hypothetical-protein
MAKTSGTADEILNLPSGGGSVSGDGGDFSVDLNTGTATLKFDLTVPAGPNGITPPHTLQYSAGAGDGAFGIGWSLGLMTIRRRITPATGAAEPAPPGACSLVGVGELVDMGARRFRPIVDATGLLIEFTGASWTATDKTDTQYTLGTSANARIGGGALPAAWLVDRCADSAGNAIAYTWLDVGGARVPQAIAWGTYRLDFVYEARPDVLVDGSYGAPVTLDKRCARIELHATTEAPSLVRSWTLLYDDDGGRGRSLLATIREQGHEADGSILAAPERTFAYSSPGAPALVPVTGWTTPLSDPNTDLVDLNGDGLPDIVHLGHGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFADMSGNGSVDVLVLDAPFSGYYPLAAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNGDGITDILLDTGRGWLAYLRDGPASWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDILRVTGGGLTYWPARADGGWDAAIAMTPSPAFGRDFDPHRLALYDVDGDGCADLVYVGLQSVTLWRNVGATRLAAPVAIPGTPVALPGSYRIVDLLGSGTAGVHFQLPSIAGASRQSYLDLGGGVKPYLLTDLAHGAAQSTHIGYRTSTEYARDDAQAGAPWRTYHPFPIQCVARTDQTDHGTGATTSTRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPARPLTGDEALKLGALRRKPLVTATYGLDGSPLERRPYSITRHAYDALLVASTADNGKRIAVPYCTTSTEERWERQSAAVSARTVDYLAITSEGDVTSQRTRAQRAGIAAPDQDVTTTTTLATGGKNLRLPARVTQTAPGGDIVSESICFYDGDAFAGLPEGQATRGLVTRIEDRVFDDAFVASVWGDTPPDLTQYGYHRLPGEAGSWWKTRRAHARGANASGPTLATKGPLGALQTLQYDASGQRVVKVIDALGNAVAATTDARVFQTASLTDANGHRTADAFDALGRVVATIGPLDTPALPTIAFTYTVGAISTVTSATRGTHGGADAVPALTWIDGTGNVLGKGTPAAAPGEWTVTHAVRRNARGLVAASFLPYAATGANWQPPPADTGATTSTYDALGRLVQLTRPDGLVVTSRREGDTLITSETWPGGAALDVERQVYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVTLPGGAHVAFTLDLLGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTEVDAMNRATNVYHDAEPAPRVRYEYADASGAPPADGIVANRYTRLWRITDEIGTVDFEYDEAGRKTATTRTVAATGQRFVTRRAYDALGRLARATLPASAPGGAARTIAYGYAADGRLVSASGVVKDAAYDRFGRLSSIDYENGASTLIDYAANAGGIARVRVLDAARNVLRDTTLTRGGGLVQTLTSAHAGDDSVDFGYDPLRRLTSAHYRQGATAADAHDWTFDDAFNATAATDAGVLTYEPGTHRLASVGGAAVAFDAAGRMTSGRFGAATFDAADHLSAVTLPDATHIAHTYDYQGRRVRSTKNGAQTYFSPIEDIEFQGDTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTPFGYARAADGAAPAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSLYTVGAWNPYVYCLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSANIGGWLLAGVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGAAAAGIDTLIGGTKTFLSFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGTLLGAGIGAIAGTGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLAQLSMPNGFNAGNLLGLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGFSYAHQISLLLGAAPYFIDYAATMAQIVDANGVNNFEMAFNNAFGSGSPSNTG
>NZ_CP038216.1|WP_004526088.1|95299_98566_-|hypothetical-protein
MLSLTQRVLTYSFIDRPPVNPRAIGTSSADAALLAQIDALLASAAASFKARAYDAALDDYFACESLIYSHLDAQWNPDLGGRLRSRLPRDAALFDSLLSATSQWLNVLPVPAPASPVRPATPPPAQALAGVAALRGAGLAPVSPNPAATAQALSDMQLASLYTSQGNSAASSVAVTRAKAVDAAVVGAFSPPQMPNPSALPAANPNAAPSTTPGFHPAPGVMPPRGIDLAPAALTPLKIQPMPKLPIALLAQKQVGLLTGSGAQTAVKAIQWAASGAPDIASIKTILYAPHASAAALPDALTNANSLWERSVLLPHDYFYTIPLAIAHCYQALGDYANAETYYLQAAGYAYLNTATEGPYIWVALAQLYRAWGDSLYLQGDRAGATNAYGKVVTPGSPAAPATALYQLAGLATAAKRATALLPQLATLAQTGTGGVTADDVAIATVLLEVYAKLVQIGAGLDYWGNYAAAVPIWSFSYLQQVAINFAQLAQQAENQVVNFWNQADQAKLTRTELANQVSQASGQINAAQQQLAVAQAQAQAYQAGVALAQTRATNAAKNAQEYGSLNSQVIVIQATGQQVSGGDDGDYNGVSAMANQYLSGQRISGDSATVAAATNLAANRLSQQFQIDSMNRTTAEMQQALAQAQAQLAAANAQVSAAGANLAVAQLNAQAAAQTLGVFDADTFTPQVWKAMGNFVDQIYERYMNMALRAAKLMQQAYNFENDVSVSFIKASYQGVVDGLLAADALMADIQSFTDDLVNAKRGKKQYLKQSISLASRYGYLFETQLRKTGTMTFETTLDDFDSAYPGTYQGRIRRVLVSVQGIVPPTGISGTLGNEGISFYRLPADVATPAAPSKVRVQSAETQVISDYDPVQDAVLAPPPENQTGIFEGAGVASSWTLSLPPALNDINYGTLTDVVLTFLYEARFDPRLVQPVLAQLASRPGFYNRERAIPLAWLYPDLFYGFVSTGTLTLNLSAADFPIDQTAPAVTAVSLLVAMKPGTPASNVTIALAAPGKGALSGVTDATGAISSQSAGSAWAGAVGGAALGDWTLTLGAAANPSLAPGGKLDLSPLINLVLVIDYAFKPRG
>NZ_CP038216.1|WP_004526089.1|98538_98754_-|hypothetical-protein
MPSYCLDTPVFDFALPRRKRRAPLDAVIAVRANEVATVNQVHGRPSAIRRSGAAARRCRGAPRCFRSHSAY

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Crispr_ID: NZ_CP038216_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038216_2

555103-555436

Orphan

Consensus_repeat	Method
CGGACGAGGCGGACGAGGCGGACGAGGC	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP038216_2

>merge|NZ_CP038216|2|555103-555436|CRISPRCasFinder
CGGGCAATGCGGACCGCGCGGGCGGCGCGGCCGCCTCGGCGAGCATAGTCCGGGCCGCTGACGAGGCGGCGGAGCGGGGCGATGCGCCGGGGGCGGGCGGCGGCGGCGTGGGAGAGGCCGGGAGTGACGGCGATGCGAATAGGCGCGGCGACACGGGGAGCGCGGGTGACGCGGACGATGCGGTTGATACGGCTGATATGGCTGATATGGCTGACACGGACGGCACGGACGATACGGACGATACGGACGATACGGACGATACGGACGAGGCGGACGAGGCGGACGAGGCGGACGAGGCGGACGAGGCGGACGAGGCGGACGAGGCGGACGAGGC

>NZ_CP038216|2|1|555103-555436|CRISPRCasFinder
CGGGCAATGCGGACCGCGCGGGCGGCGC	GGCCGCCTCGGCGAGCATAGTCCGGGCCG
CTGACGAGGCGGCGGAGCGGGGCGATGC	GCCGGGGGCGGGCGGCGGCGGCGTGGGAGAGGCCGGGAGTGACGGCGATGCGAATAGGCGCGGCGACA
CGGGGAGCGCGGGTGACGCGGACGATGC	GGTTGATACGGCTGATATGGCTGATATGGCTGACA
CGGACGGCACGGACGATACGGACGATAC	GGACGATACGGACGATA
CGGACGAGGCGGACGAGGCGGACGAGGC	GGACGAGGCGGACGAGG
CGGACGAGGCGGACGAGGCGGACGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038216.1\|WP_004191939.1\|547424_549704_+\|ornithine-decarboxylase	unknown	unknown	gnl\|CDD\|224893
NZ_CP038216.1\|WP_004522548.1\|546109_546649_+\|superoxide-dismutase-family-protein	unknown	unknown	gnl\|CDD\|376292
NZ_CP038216.1\|WP_038722865.1\|556671_557190_-\|spore-coat-U-domain-containing-protein	unknown	unknown	gnl\|CDD\|227717
NZ_CP038216.1\|WP_004205947.1\|549706_550429_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|377758
NZ_CP038216.1\|WP_004191886.1\|551269_552679_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP038216.1\|WP_004192130.1\|543859_544507_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NZ_CP038216.1\|WP_009929398.1\|555953_556664_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP038216.1\|WP_004193185.1\|564228_565218_+\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP038216.1\|WP_004526331.1\|564014_564194_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004522540.1\|558747_559563_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|375319
NZ_CP038216.1\|WP_122766465.1\|560610_560841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_009929378.1\|541200_543378_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234655
NZ_CP038216.1\|WP_004193146.1\|565217_567197_+\|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX	unknown	unknown	gnl\|CDD\|235899
NZ_CP038216.1\|WP_004193796.1\|544888_545977_+\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|183270
NZ_CP038216.1\|WP_011204932.1\|557585_558575_+\|spore-coat-U-domain-containing-protein	unknown	unknown	gnl\|CDD\|368347
NZ_CP038216.1\|WP_004526329.1\|559745_560501_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP038216.1\|WP_004192666.1\|546752_547322_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_CP038216.1\|WP_014917496.1\|558538_558751_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004535957.1\|550562_551237_-\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_CP038216.1\|WP_004526322.1\|539831_540845_+\|methyltransferase	unknown	unknown	gnl\|CDD\|366359

Protein	Function_ID	Function_description	E-value
NZ_CP038216.1\|WP_004191939.1\|547424_549704_+\|ornithine-decarboxylase	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	0
NZ_CP038216.1\|WP_004522548.1\|546109_546649_+\|superoxide-dismutase-family-protein	gnl\|CDD\|376292	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC). superoxide dismutases (SODs) catalyze the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the human SOD1 gene cause familial amyotrophic lateral sclerosis (Lou Gehrig's disease). Structure is an eight-stranded beta sandwich, similar to the immunoglobulin fold.	1.2644e-32
NZ_CP038216.1\|WP_038722865.1\|556671_557190_-\|spore-coat-U-domain-containing-protein	gnl\|CDD\|227717	COG5430, COG5430, Uncharacterized secreted protein [Function unknown].	1.14415e-24
NZ_CP038216.1\|WP_004205947.1\|549706_550429_+\|DUF1311-domain-containing-protein	gnl\|CDD\|377758	pfam07007, LprI, Lysozyme inhibitor LprI. This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.	3.26871e-07
NZ_CP038216.1\|WP_004191886.1\|551269_552679_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP038216.1\|WP_004192130.1\|543859_544507_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	3.15115e-48
NZ_CP038216.1\|WP_009929398.1\|555953_556664_-\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	5.59759e-30
NZ_CP038216.1\|WP_004193185.1\|564228_565218_+\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	3.39289e-158
NZ_CP038216.1\|WP_004522540.1\|558747_559563_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|375319	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain. This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid.	6.59944e-35
NZ_CP038216.1\|WP_009929378.1\|541200_543378_-\|methionine--tRNA-ligase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP038216.1\|WP_004193146.1\|565217_567197_+\|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX	gnl\|CDD\|235899	PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed.	0
NZ_CP038216.1\|WP_004193796.1\|544888_545977_+\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|183270	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC.	2.88814e-157
NZ_CP038216.1\|WP_011204932.1\|557585_558575_+\|spore-coat-U-domain-containing-protein	gnl\|CDD\|368347	pfam05229, SCPU, Spore Coat Protein U domain. This domain is found in a bacterial family of spore coat proteins, as well as a family of secreted pili proteins involved in motility and biofilm formation. This family is distantly related to fimbrial proteins.	1.42872e-26
NZ_CP038216.1\|WP_004526329.1\|559745_560501_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.36785e-27
NZ_CP038216.1\|WP_004192666.1\|546752_547322_+\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	4.09583e-112
NZ_CP038216.1\|WP_004535957.1\|550562_551237_-\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	1.40924e-45
NZ_CP038216.1\|WP_004526322.1\|539831_540845_+\|methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	7.65433e-37

>NZ_CP038216.1|WP_004191886.1|551269_552679_-|argininosuccinate-lyase
MTSQLHKKGEAWSARFSEPMSELVKRYTSSVFFDKRLALVDIAGSLAHAGMLAAQKIISADDLAAIERGMAQIKGEIERGEFEWQLDLEDVHLNIEARLTALIGDAGKRLHTGRSRNDQVATDIRLWLRGEIDRIGGLLNDLRGALIDLAEQNADTILPGFTHLQVAQPVTFGHHLLAYVEMFSRDAERMRDCRARVNRLPLGAAALAGTSYPIDRHAVAKTLGFDGICANSLDAVSDRDFAIEFTAAAALVMTHVSRFSEELVLWMSPRVGFIDIADRFCTGSSIMPQKKNPDVPELARGKTGRVNGHLMALLTLMKGQPLAYNKDNQEDKEPLFDTVDTVADTLRIFAEMVAGITVKPDAMRAAALQGFSTATDLADYLVKRGLPFRDAHEAVAHAVKVCDARGIDLADLTLDEMKQELPNVAHLIGEDVFDYLTLEGSVASRNHPGGTAPDQVRAAAKAARAALGQ
>NZ_CP038216.1|WP_004535957.1|550562_551237_-|HAD-family-phosphatase
MFSAAIFDMDGLLVDSERTIMNAWIDVARAHGTALSAADYLQTVGRSFREGQAILAGLLGDDAFRAVSAQVREQLAAPRPHPKFPLKPGARALLGVLAEAGVPCAVASSSARDVIRTRLHAVGVLERFAAIAGGDEVARGKPDPAVYRLAAERLNVSAHACVAFEDSDFGALAATRAGASVVTVPDLKAPTPEIVALSLRVLDSLDEAIALVPAWFGPRAAPLA
>NZ_CP038216.1|WP_004205947.1|549706_550429_+|DUF1311-domain-containing-protein
MTAVRKTLVRFAAAALAGWLAAAAAGAAHAEVAAADPIDVAMRQCLARRDRSSTAGQIQCMDEARQQWQGEVDAAYQRLLKTAPADARRGWQESQRRWLAWRKDEAHLVRAVYETTQGTMYAMANADMRLQPVRERALALRGAADRYYAQPGGGKGAVHRVRPCMRDAACEHALFDMNRYYEKLRARMPADSLPTLVAAQREWAAFRDAMTPLVSESERVDLIGARVATLKRFSETVNNR
>NZ_CP038216.1|WP_004191939.1|547424_549704_+|ornithine-decarboxylase
MKFRFPVVIIDEDFRSENISGSGIRALAEAIEKEGVEVLGLTSYGDLTSFAQQSSRASCFILSIDDDELMLGELGADGELPELATAIIELRAFVAEVRRRNADIPIFLYGETRTSRHLPNDILRELHGFIHMFEDTPEFVARHIIREAKVYLDSLAPPFFKELVKYADEGSYSWHCPGHSGGVAFLKNPLGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAASERNAARIFSADHLFFVTNGTSTSNKIVWHATVAPGDIVLVDRNCHKSILHAITMTHAIPVFLTPTRNHFGIIGPIPRDEFKPENIRKKIEANPFAREALRKNPNAKPRILTITQSTYDGVVYNVEQIKDLLGDLVDTLHFDEAWLPHAEFHPFYQDMHAIGAGRPRTGALVFATHSTHKLLAGISQASQIVVQDSENRTFDKHRFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRRAMRKVDAEYGDDWFFSVWGPDNLSEEGIGSRADWLLKPNDRWHGFGPLAPGFNMLDPIKATIITPGLDVDGEFGETGIPAAIVTKYLAEHGIIVEKTGLYSFFIMFTIGITKGRWNSMVTELQQFKDDYDNNQPLWRVLPEFVAQYPLYERVGLRDLCTQIHDVYRANDIARLTTEMYLSNMEPAMKPSDAFAKLAHREIDRVPLDELEGRVTSILLTPYPPGIPLLIPGERFNKTIVNYLRFARDFNERFPGFHTDIHGLVAEEMNGRIEYYVDCVRD
>NZ_CP038216.1|WP_004192666.1|546752_547322_+|dCTP-deaminase
MSIKSDKWIRRMAEEHKMIEPFVPDQVRAAEDGRKIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKGDVCIIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYANEGVAQVLFFESDEVCDVSYADRGGKYQGQRGVTLPKT
>NZ_CP038216.1|WP_004522548.1|546109_546649_+|superoxide-dismutase-family-protein
MKRRLDGVPGWLALNAPLVLAAIGLLAGCTTFASQHEKRADALLQPTVGSQARGTVTLAERPDGVQVTYNFAGLPPNSDHALQVHERGDCNAADGSSAGAVFAPAADRLRAGARVGGDLGNIHADANGVAAGFITAPDLALDGVRSVLGRSVLVHRDPADPAFPQHGAGPALACGVVRQ
>NZ_CP038216.1|WP_004193796.1|544888_545977_+|iron-sulfur-cluster-carrier-protein-ApbC
MSIDRALVDAALAAVVDPNTGRPYAAHRGIRNVAIDGDAVSADVVLGYPAKSQFDDARARVAAALAAVPGVRQARVDVSQEIVAHAVQRGVQLLPNVKNIVAVASGKGGVGKSTTAVNLALALAAEGASVGMLDADIYGPSLPTMLGIHERPESPDNKSMNPLVGHGLQANSIGFLVGEDNPMVWRGPMATSALEQLLRQTNWRDLDYLIVDMPPGTGDIQLTLAQRVPVTGAVIVTTPQDIALLDAKKGLKMFEKVNIPILGIVENMSIHVCSNCGHEEHVFGAGGAERMAREYGVAVLGSLPLDIRIREQADSGAPTVAADPHGKLAERYRAIARGVAIAIAERARDMSSKFPTIVVQNT
>NZ_CP038216.1|WP_004192130.1|543859_544507_-|OmpA-family-protein
MNTKIATRLSVFALAGALLAGCATQQGTNTAVGTGTGAALGAGIGALAGGGKGAAIGAGVGALVGGVTGYNWQAIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQNPQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNATEAGRAQNRRVEIYLRAPQAAQ
>NZ_CP038216.1|WP_009929378.1|541200_543378_-|methionine--tRNA-ligase
MSASDLTSVQAGAPQGRRQILVTSALPYANGQIHIGHLVEYIQTDIWVRTMRMHGHEIYYIGADDTHGTPVMLRAEQEGVSPKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQAYDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPYSVVSGAAPVRKTSTHYFFRLSDPRCEAFLREWVSGLAQPEATNKMREWLGEAGEAKLADWDISRDAPYFGFEIPGAPGKYFYVWLDAPVGYYASFKNLCQRRGLDFDAWIRKDSTTEQYHFIGKDILYFHTLFWPAMLEFSGHRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYIDTGLNPEWLRYYFAAKLNATMEDIDLNLEDFQARVNSDLVGKYVNIASRAAGFLLKRFDGRVQASAMNHPLLATLRGAIPQIAAHYEAREYGRALRQTMELADAVNGYVDSAKPWELAKDPANAVALHETCSVSLEAFRLLSLALKPVLPRVAQGVEAFLGIAPLTWADAGTPLSPEQPVRAYQHLMTRVDPKQIDALLAANRGSLQGTAAAAEAGAANGNGAGSKNGKGAKAAAQPAASAANADDGASPIISIDDFAKIDLRIAKIVACQAVEGSDKLLQLTLDVGEERTRNVFSGIKSAYQPEQLVGKLTVMVANLAPRKMKFGLSEGMVLAASAADEKAEPGLYILEPHSGAKPGMRVK
>NZ_CP038216.1|WP_004526322.1|539831_540845_+|methyltransferase
MTHTFPRYDDAAAFEVATNLFVYPAMLIAHRLGLFERLGEGPRTLDEIGAALGLARRPAEALVNASAALGFVRRDGDRFALTARARDLLLPASRQYFGAFWDLMYDNGDTFSIAGLEAALRGDAPHVYGETDVFDSHRRHEALGMRFTRAMQSLSASHAMVWPTKLDLARHRVMLDVGSGSGANAVGALSAWPALRAVLFDLPAVCELAATFVDARWRERVTLHPGDMWHDPFPAADLHFYSNVFHDWPADKNAALARKSFDALPSGGRIVLHEVLYRDDRGGPLAAAGYSLMMIGWTQGEQYTSRELRAMLGGAGFASIETIPSGGYFSLVTGVKP
>NZ_CP038216.1|WP_009929398.1|555953_556664_-|molecular-chaperone
MTTSAHCWLAALTLAGAVAPASGASLQISPVTIEMAADNPAAGVTLSNPGARPVYGQVRTFRWTQEQGDDMLAPAPELVASPPLVQIGGQGEQLVRLVRVAHDKPRREESYRVLIDELPTPDAPVVNGIAIRLRYSIPVFVVPDVALGPPKLTWRIVHGATGWLLRVTNDGERHAQLASVRLVDDAGKAYEIAPGLLGYALAGGMRQWPLRIDAARIRKVRAAINTRPVEADVSPP
>NZ_CP038216.1|WP_038722865.1|556671_557190_-|spore-coat-U-domain-containing-protein
MYFLKHPLLSALAAAVLVATPSFRPATAATATATFTVSLTIQANCTISANALSFGTNGVLATAVNQQTTLSVTCSNTTPYNVGLDAGSVSGSTVSSRLLAGTTTGNTSTTVGFQLYQDSGHTTIWGNTVGTNTVSGTGNGTAQTLSVYGQVPAQTTPKPDTYESTVTATITF
>NZ_CP038216.1|WP_011204932.1|557585_558575_+|spore-coat-U-domain-containing-protein
MTITNIRQRDSKQWRLALLVAWLLACPWGAAHAETCSVTTPAPNFGSVDPITLAAVSTTATMTVTCTWSAVTLTPNVLVCLNLGGTSPRYLTNGSNQMQYDLYQDSGHTVSWGSSYYGTTPISLTLVKPALSTSASSTVTIYGQIAANQPTVPTVGNASTTYSQTFGGNTTSLNYNFYTLAPLPCASQSSFGTFAFTASATVVNDCFINATNVAFGSTGVIQGALTATGTISAQCTNGDAFRIALNGGASGNVAARAMQRTGGGGAVNYQLYLDAAHSTIWGDGTAGTSTATGTGSGLSQSLTVYGQVPAQTTPAPGTYSDTITATITF
>NZ_CP038216.1|WP_014917496.1|558538_558751_-|hypothetical-protein
MTARRRALDRLRAWHPPRPALPRTATARKLAAPRETHRSRSRPVRGGRGRPKPRRASPRQNVIVAVIVSL
>NZ_CP038216.1|WP_004522540.1|558747_559563_-|helix-turn-helix-domain-containing-protein
MSRQPVPPPSLDATPARALGEFIRAHRERLSPQAVGLPPGPRRRTPGLRREEVAQLCGVSPTWYTWIEQGREVSASADALARIAVALRLSRAERAYLFELAAQRDPAEPEFAASDVPDTLVAAVQLIATPAYVLDRQWNALAWNDAAAALFIGWLDGERDERNLLRFTFASPAARALIVDWETRARRLVAEFRADTIRHLNDAPTRALIDSLLAESDAFAHYWASQDVGEREGGERAFDHPREGRVVYQQMTLKPAHREDLKLVVLVREAA
>NZ_CP038216.1|WP_004526329.1|559745_560501_+|class-I-SAM-dependent-methyltransferase
MKHHDRVADAFGTTASAYLTSAVHATGADLDTFAAEIGATPGARVLDLGCGAGHASFAAARGGAHEVIAYDLAPQMLATVEAAARERGLSNVRIEQGAAERLPFADASFDWIVSRMSAHHWHDVPRALAEARRVLKPGGRVLFVDVAGADHPLVDTHLQAVEVLRDASHVRDYRVDEWLAFFAQAGFAARVRERWRLSIGFDGWVARMRTPDVRAHAIRALWADAPDEVRAYFDVQPDGSFKLDVVMIDAR
>NZ_CP038216.1|WP_122766465.1|560610_560841_+|hypothetical-protein
MNIRMLLPRFGGRTMLVTSTADRRPPTADHRSPITDHRSPITDHRLPITDYRLPITDHGRASAALRTFRAKQNGRA
>NZ_CP038216.1|WP_004526331.1|564014_564194_+|hypothetical-protein
MKPDDAANDAAGDAAANRTRWRMPDAFSNRTAVRDLDADRTGRSRSPPGGRAGKVRVLP
>NZ_CP038216.1|WP_004193185.1|564228_565218_+|hydroxymethylbilane-synthase
MNSETLPAELPATLTIASRESRLAMWQAEHVRDALRKLYPACDVKILGMTTRGDQILDRTLSKVGGKGLFVKELESALADGRADLAVHSLKDVPMALPEGFALAAVMSREDPRDAFVSNDYASLDALPAGAVVGTSSLRREAMLRARHPRLDVRPLRGNLDTRLAKLDRGDYAAIILAAAGLKRLGLAARIRALLDVDDSLPAAGQGALGIEIAARRADVAAWLAPLHDHASALAVEAERAVSRALGGSCEVPLAAHAVWRGGELHLTGSVSTTDGARVLAAHAHARAATAADALALGRRVSDALERQGARAIVDALVAASAQAQKGGA
>NZ_CP038216.1|WP_004193146.1|565217_567197_+|fused-uroporphyrinogen-III-synthase-HemD/membrane-protein-HemX
MAGAPRTFTAVLTRPDGQSAALAAQLAAAGIDVLDFPLIDIAPLADDAPLAEAFARLDAYALVVFVSPNAVDHALARLGAIWPHPLPIGVVGPGSVAALARHGIAAPAHRVIAPSAPDDGGEPHYDSESLFAEIARAFDGEAKLAGKRVLIVRGDGGREWLAERLREAGAEVELVAAYRRVSPEPSIGAWERVHALLSGAPHAWLVTSSEGVRNLQELAHEHLNETEIDALKHARFVAPHSRIVETARALGFDRITLTGAGDERIVRAFRTLADQADQPATAAPMPSRMTDTNDTKDVSSKPAAAPVAPPNQPFTPFETKERRGAASAALWFVVVVIAAAAGVGGYALNRKVDRLDQHATERQKALDAQTAELRTKTEQALASVRQADSQLSQLEGKLADAQTAQTALQQQYQDLSRNRDAWMIEEVGQMLSSASQQLLLTGNTQLALIALQNADARLASSQSAQAVVVRKAIAQDIERLKAAPSADLTGLAIKLDDAIAKVDTLPLAGEVLAPHAQAKPDAAASARQAAAAAGEPRWKAWWRGFSAGIGEQLKSLVEVRRIDHADAMLASPEQGYFVRENVKLRLLSARLSLLARDDGAMKSDLHAAQAAVARYFDGASKDTRVVQDLLKQVDAASLTVAVPNLNTSLNAVQQFKSRG

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Crispr_ID: NZ_CP038216_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038216_3

880984-881125

Orphan

Consensus_repeat	Method
CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP038216_3

>merge|NZ_CP038216|3|880984-881125|CRISPRCasFinder
CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGGACGAATGCCGTTCGCAAGTTCGCAGCGGTTCGCGCTGGAACGGCGTCTGCCGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCTGGCG

>NZ_CP038216|3|2|880984-881125|CRISPRCasFinder
CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCGGCGG	ACGAATGCCGTTCGCAAGTTCGCAGCGGTTCGCGCTGGAACGGCGTCTGC
CGCGTATGCGGCGAACGCCGGCGCGACAAGCGTTGCAGCGCTGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038216.1\|WP_004521871.1\|865600_867877_-\|membrane-protein	unknown	unknown	gnl\|CDD\|372320
NZ_CP038216.1\|WP_004521865.1\|883463_885395_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP038216.1\|WP_004193167.1\|863720_863900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004526507.1\|864051_865416_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP038216.1\|WP_004526510.1\|868431_871776_+\|exodeoxyribonuclease-V-subunit-gamma	unknown	unknown	gnl\|CDD\|335690
NZ_CP038216.1\|WP_004535481.1\|886500_887325_+\|DUF1223-domain-containing-protein	unknown	unknown	gnl\|CDD\|369071
NZ_CP038216.1\|WP_004526525.1\|888479_889271_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP038216.1\|WP_004192878.1\|865412_865604_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004191162.1\|863604_863724_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_080109917.1\|887366_888464_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP038216.1\|WP_004542975.1\|882551_882776_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004534655.1\|889724_890660_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_CP038216.1\|WP_004193339.1\|886034_886340_+\|pentapeptide-MXKDX-repeat-protein	unknown	unknown	gnl\|CDD\|131998
NZ_CP038216.1\|WP_150976702.1\|871772_875585_+\|exodeoxyribonuclease-V-subunit-beta	unknown	unknown	gnl\|CDD\|236784
NZ_CP038216.1\|WP_004535700.1\|879100_880312_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP038216.1\|WP_004193128.1\|883027_883240_-\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|182532
NZ_CP038216.1\|WP_076802140.1\|889498_889708_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_071810728.1\|889301_889502_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038216.1\|WP_004193488.1\|878274_878679_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP038216.1\|WP_150976700.1\|875581_878278_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236783

Protein	Function_ID	Function_description	E-value
NZ_CP038216.1\|WP_004521871.1\|865600_867877_-\|membrane-protein	gnl\|CDD\|372320	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS. This family has similarities to the fusaric acid resistance protein family. The proteins are lodged in the inner membrane.	6.66104e-82
NZ_CP038216.1\|WP_004521865.1\|883463_885395_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP038216.1\|WP_004526507.1\|864051_865416_-\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP038216.1\|WP_004526510.1\|868431_871776_+\|exodeoxyribonuclease-V-subunit-gamma	gnl\|CDD\|335690	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit. The Exodeoxyribonuclease V enzyme is a multi-subunit enzyme comprised of the proteins RecB, RecC (this family) and RecD. This enzyme plays an important role in homologous genetic recombination, repair of double strand DNA breaks resistance to UV irradiation and chemical DNA-damage. The enzyme (EC:3.1.11.5) catalyzes ssDNA or dsDNA-dependent ATP hydrolysis, hydrolysis of ssDNA or dsDNA and unwinding of dsDNA. This family consists of two AAA domains.	0
NZ_CP038216.1\|WP_004526525.1\|888479_889271_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	1.21624e-90
NZ_CP038216.1\|WP_150976702.1\|871772_875585_+\|exodeoxyribonuclease-V-subunit-beta	gnl\|CDD\|236784	PRK10876, recB, exonuclease V subunit beta; Provisional.	0
NZ_CP038216.1\|WP_004193128.1\|883027_883240_-\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|182532	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB.	5.81885e-06
NZ_CP038216.1\|WP_080109917.1\|887366_888464_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	7.09095e-56
NZ_CP038216.1\|WP_004193339.1\|886034_886340_+\|pentapeptide-MXKDX-repeat-protein	gnl\|CDD\|131998	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein. Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.	0.000353246
NZ_CP038216.1\|WP_004535481.1\|886500_887325_+\|DUF1223-domain-containing-protein	gnl\|CDD\|369071	pfam06764, DUF1223, Protein of unknown function (DUF1223). This family consists of several hypothetical proteins of around 250 residues in length which are found in both plants and bacteria. The function of this family is unknown. Structurally it lies in the Thioredoxin-like superfamily.	4.25655e-68
NZ_CP038216.1\|WP_004535700.1\|879100_880312_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	3.37922e-53
NZ_CP038216.1\|WP_004534655.1\|889724_890660_+\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	7.01318e-57
NZ_CP038216.1\|WP_004193488.1\|878274_878679_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	3.43394e-65
NZ_CP038216.1\|WP_150976700.1\|875581_878278_+\|AAA-family-ATPase	gnl\|CDD\|236783	PRK10875, recD, exodeoxyribonuclease V subunit alpha.	1.44375e-72

>NZ_CP038216.1|WP_004535700.1|879100_880312_-|EAL-domain-containing-protein
MRYHDVTLASAFQPVISITHKRVVGYEALARATDANGAPISPDTLFARAQARGETILLDRLTRCLHVANFAAQDTGACWLFLNVLPQMFDAGIAPGAFIEALCAHFALPPTRVVLEVIEQPSRNEVALARTIDMIQHGDFLIAVDDFGTGFSNFDRIWQIKPDIVKLDRSILERSLAASDAHRIIHHLVTMLHHAGTMVLAEGVENEDALQILMDADVDFVQGFCFGRPAPSLEHARRAAPARIEAAWRRFAERTKARCGDVVHPGFDTIERIMLTGAADYAQTRNLRDAAQRLLTSPIVRRVFVAEANGEQVEPSVAIETPDAPSATARRLAPLLPELHCNWSRRAYFQRAIAAPGRVALMGPHFSLTDGRDCYTAAVAIHLGTTLKVFCVDFDFSSYGDGR
>NZ_CP038216.1|WP_004193488.1|878274_878679_+|aminoacyl-tRNA-hydrolase
MTLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKNRAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE
>NZ_CP038216.1|WP_150976700.1|875581_878278_+|AAA-family-ATPase
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASRATAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDGIVRGGECPLVVDRDGRLYLARYFEYETRLANALVERSRCGGAPAGGADALSPDALGERLVRYFGPQKERGVDWQRVAALIALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPDLRIALAAPTGKAAQRMQEALHARAGSLPAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCATIARTLGVGEAEFVAALPDGFVVQAGGAERVADARAAAADMDAAARGTAGAAAAAARTTAAAAARMTMAAAAATGAAPESAAQRAPAPHAGRRGGGRASNRTVDDAQGSLFAFDDDAFGVGTSGGEPGAGAQGAGRRDGGASSLDGPHAGRRDGGASPGAAHSRRDAFDARARSGPADVSDLENAARAYAPAGAAGPADSPADASFVEPAAWIEADELAWLDNAVFSFSEGASANAEADGRRSAAATATDADARTAPPVAREATAPTPRETARSDGSAVAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTQDDAAARFSDDGGATLSAATVEQLARGFAGYAAALRDALATPEPDALPLFDVLNRFRVLCATRTGARGAEEVNARMAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELVYTAITRARARVQVIGSRAVLALAIATRTARDSGLAARIADALRARQEGAR
>NZ_CP038216.1|WP_150976702.1|871772_875585_+|exodeoxyribonuclease-V-subunit-beta
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVTFTKAATAELHERIRARLAQLAHALDTGDGGGDPFIARLFETTLAPGRGLDPQTAAKRVRRALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPVAAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAAAIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQSALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKRTRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGPLFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVDACNRVFGANPRAFVLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPVGDDVLTKRDAQRHAAHACAAEIARLMRGAREHAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFATIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAAGGASGNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLMAGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERASREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFDAWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDAWRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAAPRELAEDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERLPAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDVALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQALLYMVALHRYLRVRMRGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEALDALMREGDA
>NZ_CP038216.1|WP_004526510.1|868431_871776_+|exodeoxyribonuclease-V-subunit-gamma
MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALRRRLELDLAKRHGVCANVRFSYLAQWLWAQIGEVLTVPAHSPFAPDRLVWRCYRLLSDHGAAPWRASPRLAAYLAAADAPMRHELAHRIATVFDHYLTYRPEWLAQWQDGESIFALEGAPRHGGEAARDDEAWQAALWRALLAELSDSGMPPAHRFLREARAFDPDVIARARVKWPDAVSVFALPTMPPLHIALLRELSRWIDVRIYALNPCREFWFDIVTAARAESLDAADRLDYQEVGHPLLAEWGRQTQAQLHMLHELTESAAASDASRYADNPAPTWLARVQNAILDLQPEAALGEPPAERGVEVHVCHSLARQLEVLHDRLLAWFDADPSLAPSDVLVAMPDLATAGPLIDAVFGTPAGADAARIPYRITGLPPSQANPVARVLLDWLALPERDVGAPELVEWLRADAVAARYGIDATALETVQTWLAASGARRGLAPDAAEPPNPAVPAPRHTFADALTRLFLGYAMPDGAAPVSTWLPIAGAEGGEAELLGRLARFTDDLDGFARRIARDLTPQGWGDVFADALARFFDSGPAFADALSGVRDALDAMLAAMAEGAAGAALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDDGVLPSLARADEFDLMAVFAKLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPLPPAALVDELLDHLAAASAGPDAPPDAVDAARRAFVIEHPLQPFSAEYFAPGGALFTYDASRATLARLLAEGACAQARPFFAAPLPAEPEQPVAFADFERFWRHPARSLLRARLGIVLLDAQAELVDTEPFELDYAGSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDHALDALAQLAGNVRRALADGATRVPFAFDVAPAWPAAGDARWFGEHDAALAAAATREPLRLHGALARLTAAGQVIYRYARPGARDYLAAWLAHLVYCAIDPGGPRRTLWFGSGDTFEFAPVAAPLEQLAPLAALFRAGRRMPLAFFPRSAWALVSESESKAAGVWINDRVAGEADDASLALAWRGANPSLDEPFGALAHLVFDPLVEHLRRAS
>NZ_CP038216.1|WP_004521871.1|865600_867877_-|membrane-protein
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLAVLHDRELGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFFSALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVSRWQARRIEQQALAESLFACASYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMMFNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRLPHSRISVKAELRAIEYEIELMRKKQFAATHPEAYAAVLATFRRIWSATRLIDKMRRNLSGSADAQRTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSLRHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNAQRIVGTLIGCAASLALIYTVHEPHVLIAIMFGSMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAIGKLVADALATTRKYFEATWRAGRGKAAPAVPAADGAAAVPAVAAVVDAVAPGLDGDYQYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVPELNDLLVQTHVLGAQITAAAPLLRHACEQGNPPALERGMAAVREHLEQAEAGVPPPANQAETSKQLTRELDSMVVDAERSDAGADLTHDLKVLAHQCKQMLASSLLIRKDASVIRLPE
>NZ_CP038216.1|WP_004192878.1|865412_865604_-|hypothetical-protein
MSRPPPPFLSTVSRRARTQGFPDYCPRASIGMIYPAPSCLYNFSSASAGPHRPADDTNHSETR
>NZ_CP038216.1|WP_004526507.1|864051_865416_-|amino-acid-permease
MKNLQRHLSARHIRFLALGSAIGTGLFYGSASAIRLAGPAVILAYIVGGAAVYMVMRALGEMAVREPVPGSFGHYATENLGPFAGFVTGWTYTLEMVIVAIADITAFGIYMGFWFPHVPQWIWVLAIVAIICGLNLCHVKVFGELEFWLSIVKVGAIVAMIGGGAAILFTGMRLGSGGAPSLANLWSHGGFLPNGVGGLVASLSVVIFAYGGIEVIGMSAGEAKEPERAIPRAINAVPMRILLFYVLTMIVLMSIFPWTGVGANGSPFVQIFSALGVRSAAEILNLVVISAAISAINSDIFGAGRMMYAMALQGQAPRALAAMSARGVPWVTVLVMAGALLVGVVLNYLMPKDVFLMVAASATFATVWVWLMILLSQVAMRRRLGAAEVAALKFKVPFWPVGPALTIAFMAFVIAMLGYFDDTRVALFVGAAWLAILALVFYTRIRPRLAAVAR
>NZ_CP038216.1|WP_004193167.1|863720_863900_+|hypothetical-protein
MNDPRSKKNPVFGVAILIVVVIALVIGTILYNAISQKHEYDEAHPHAASAASAASAQHG
>NZ_CP038216.1|WP_004191162.1|863604_863724_+|hypothetical-protein
MRIARKKTDESRRAQRTAVRMRLRVECRLDEFLMERDRR
>NZ_CP038216.1|WP_004542975.1|882551_882776_-|hypothetical-protein
MNKTLVAAALASVALAGCYYPYGYYPASGYYAVPVQTAPVYVAPAYPAYYYPAPSLSLNFGYWSGGGRGYWRHH
>NZ_CP038216.1|WP_004193128.1|883027_883240_-|glycine-zipper-2TM-domain-containing-protein
MKSIRRIGVCAMLIATMASLSACDTMTTRQRNAAIGAGIGGVAGAAIGGNALSTIGGAAAGGLVGSQVGK
>NZ_CP038216.1|WP_004521865.1|883463_885395_-|phosphomethylpyrimidine-synthase-ThiC
MNANPKFLSADARVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTSFGGEKNPPIYVYDTSGPYTDPDAKIDIRAGLPALRQRWIDARGDTETLAGLTSDYGRERAADPATAELRFPGLHRHPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENQRRAEYLESLKASGPNGAKLAAMMGRQHAGQAFGAAAFGANAPAEITPEFVRDEVARGRAIIPANINHPETEPMIIGRNFLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWQDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSENDALKKGMEVKAVEFVKSGSEIYHRQ
>NZ_CP038216.1|WP_004193339.1|886034_886340_+|pentapeptide-MXKDX-repeat-protein
MKRNLIAFACVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSKGAMSGDAMSKDAMSKDAMSKDRMGKRHDHMAKGGMKAGPMSKDAMKEPMSSDKMSPMSN
>NZ_CP038216.1|WP_004535481.1|886500_887325_+|DUF1223-domain-containing-protein
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRVGAPRALDAYLALYENGVESQVSAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPANLRAADAARYGVAAFVEDPATGDVLQALDLPLCG
>NZ_CP038216.1|WP_080109917.1|887366_888464_+|cytochrome-b/b6-domain-containing-protein
MSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTIDATADATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMSQTMSQTMAQTMAQTMTQAGTEAASPAGTDAAASGACITRATRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATGRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH
>NZ_CP038216.1|WP_004526525.1|888479_889271_+|molybdopterin-dependent-oxidoreductase
MSENDRKKRENDIARIDRASLLIDVRKSLALPSRRLFGKRMLTLGGLAMLTGCTLRDDASVDDFLEKVSRANDRVQAWLFGPTRLAPTYAEADITRPFPFNAFYGIDEVPRVDADGFRLAVSGLVTGQRSWSLPALYALPHAEQITRHICVEGWSAIGRWGGTPFREFLRRVGADTSAKYVGFKCADDYYESIDMATALHPQTLLAFEYDGKRLPPEYGFPMKLRMPTKLGYKNPKHIVEIFVTNAYPGGYWVDQGYNWFGGS
>NZ_CP038216.1|WP_071810728.1|889301_889502_+|hypothetical-protein
MAPSRVRATRAARRAGFAARRCASRFLAASARRSKKRKPRLAECRMSRRNVTARAIDSSRHSFSIP
>NZ_CP038216.1|WP_076802140.1|889498_889708_-|hypothetical-protein
MKRRAVERRAMRPPASGAGKTGMTGNGGVRNDRSERAAANMTEGDERTRRRTRMMTCAAWRPHFVSIMH
>NZ_CP038216.1|WP_004534655.1|889724_890660_+|EamA-family-transporter
MTPFDRLLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLRNLLAGVGLFVFAMRRRPVRPTLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVATVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGPSSPGSTLGSITVLAGALFWAGGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGTMAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLSFVFDPARRRAQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP038216_1	1.2\|82253\|18\|NZ_CP038216\|CRT	82253-82270	18	NZ_CP038217.1	1258134-1258151	1	0.944
NZ_CP038216_2	2.4\|555347\|17\|NZ_CP038216\|CRISPRCasFinder	555347-555363	17	NZ_CP038216.1	2345400-2345416	1	0.941
NZ_CP038216_2	2.5\|555392\|17\|NZ_CP038216\|CRISPRCasFinder	555392-555408	17	NZ_CP038216.1	555428-555444	0	1.0
NZ_CP038216_2	2.5\|555392\|17\|NZ_CP038216\|CRISPRCasFinder	555392-555408	17	NZ_CP038216.1	555437-555453	0	1.0
NZ_CP038216_2	2.5\|555392\|17\|NZ_CP038216\|CRISPRCasFinder	555392-555408	17	NZ_CP038217.1	2404909-2404925	0	1.0
NZ_CP038216_2	2.5\|555392\|17\|NZ_CP038216\|CRISPRCasFinder	555392-555408	17	NZ_CP038217.1	2404918-2404934	0	1.0
NZ_CP038216_2	2.5\|555392\|17\|NZ_CP038216\|CRISPRCasFinder	555392-555408	17	NZ_CP038217.1	2404900-2404916	1	0.941

1. spacer 1.2|82253|18|NZ_CP038216|CRT matches to position: 1258134-1258151, mismatch: 1, identity: 0.944

cggccgggacatggagcg	CRISPR spacer
cggccgggacattgagcg	Protospacer
************ *****

2. spacer 2.4|555347|17|NZ_CP038216|CRISPRCasFinder matches to position: 2345400-2345416, mismatch: 1, identity: 0.941

ggacgatacggacgata	CRISPR spacer
ggccgatacggacgata	Protospacer
** **************

3. spacer 2.5|555392|17|NZ_CP038216|CRISPRCasFinder matches to position: 555428-555444, mismatch: 0, identity: 1.0

ggacgaggcggacgagg	CRISPR spacer
ggacgaggcggacgagg	Protospacer
*****************

4. spacer 2.5|555392|17|NZ_CP038216|CRISPRCasFinder matches to position: 555437-555453, mismatch: 0, identity: 1.0

ggacgaggcggacgagg	CRISPR spacer
ggacgaggcggacgagg	Protospacer
*****************

5. spacer 2.5|555392|17|NZ_CP038216|CRISPRCasFinder matches to position: 2404909-2404925, mismatch: 0, identity: 1.0

ggacgaggcggacgagg	CRISPR spacer
ggacgaggcggacgagg	Protospacer
*****************

6. spacer 2.5|555392|17|NZ_CP038216|CRISPRCasFinder matches to position: 2404918-2404934, mismatch: 0, identity: 1.0

ggacgaggcggacgagg	CRISPR spacer
ggacgaggcggacgagg	Protospacer
*****************

7. spacer 2.5|555392|17|NZ_CP038216|CRISPRCasFinder matches to position: 2404900-2404916, mismatch: 1, identity: 0.941

ggacgaggcggacgagg	CRISPR spacer
ggacgaggccgacgagg	Protospacer
********* *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NC_008758	Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete sequence	144302-144331	7	0.767
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	MG018224	Stenotrophomonas phage DLP4, complete genome	6658-6687	7	0.767
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	240347-240376	7	0.767
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	KT809302	Haloarcula californiae icosahedral virus 1, complete genome	11055-11084	7	0.767
NZ_CP038216_2	2.1\|555131\|29\|NZ_CP038216\|CRISPRCasFinder	555131-555159	29	NZ_CP027239	Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence	121693-121721	7	0.759
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4863580-4863609	8	0.733
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP008954	Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete sequence	71166-71195	8	0.733
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	417092-417121	8	0.733
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	403911-403940	8	0.733
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	417092-417121	8	0.733
NZ_CP038216_1	1.1\|82205\|30\|NZ_CP038216\|CRT	82205-82234	30	NZ_CP026567	Pseudomonas avellanae strain R2leaf plasmid p5_tig9, complete sequence	10737-10766	9	0.7
NZ_CP038216_1	1.3\|82289\|36\|NZ_CP038216\|CRT	82289-82324	36	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	201580-201615	9	0.75
NZ_CP038216_1	1.3\|82289\|36\|NZ_CP038216\|CRT	82289-82324	36	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	384570-384605	10	0.722

1. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NC_008758 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, complete sequence) position: , mismatch: 7, identity: 0.767

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
tcgttctggcggcggtggctacggtggtgg	Protospacer
  *.  **.**.******************

2. spacer 1.1|82205|30|NZ_CP038216|CRT matches to MG018224 (Stenotrophomonas phage DLP4, complete genome) position: , mismatch: 7, identity: 0.767

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
cgacggtgacgacggtgacgacggtgagag	Protospacer
 *.**************.* ******. .*

3. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
gggcgatgacgacggtggctccggcgaaga	Protospacer
.****.************** ***.*. *.

4. spacer 1.1|82205|30|NZ_CP038216|CRT matches to KT809302 (Haloarcula californiae icosahedral virus 1, complete genome) position: , mismatch: 7, identity: 0.767

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
cgacggtgacgacggcggcgacggtgacga	Protospacer
 *.************.*** ******..*.

5. spacer 2.1|555131|29|NZ_CP038216|CRISPRCasFinder matches to NZ_CP027239 (Dietzia sp. oral taxon 368 strain W5195 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ggccgcctcggcgagcatagtccgggccg	CRISPR spacer
cgccgcctcggcgagcatggtcttgccgt	Protospacer
 *****************.***. * *

6. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.733

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
acagggtggcgacggtggcaacggtggctc	Protospacer
* . ****.********** *******.

7. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP008954 (Amycolatopsis japonica strain DSM 44213 plasmid pAmyja1, complete sequence) position: , mismatch: 8, identity: 0.733

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
tcgtcgtgacgacggtggcttcgctggtct	Protospacer
  *. *************** ** ****

8. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 8, identity: 0.733

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
tatcggtgacgacggtggcttcggagttca	Protospacer
 . ***************** *** * * .

9. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 8, identity: 0.733

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
tatcggtgacgacggtggcttcggagttca	Protospacer
 . ***************** *** * * .

10. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 8, identity: 0.733

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
tatcggtgacgacggtggcttcggagttca	Protospacer
 . ***************** *** * * .

11. spacer 1.1|82205|30|NZ_CP038216|CRT matches to NZ_CP026567 (Pseudomonas avellanae strain R2leaf plasmid p5_tig9, complete sequence) position: , mismatch: 9, identity: 0.7

aggcggtgacgacggtggctacggtggtgg	CRISPR spacer
caacggtggctacggtggctacggtgagtt	Protospacer
 ..*****.* ***************.

12. spacer 1.3|82289|36|NZ_CP038216|CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 9, identity: 0.75

tgcgtcgggtggcggcggcgcgggtgcgcgcagcgg	CRISPR spacer
gggcgcgggtggcggtggcgcgggcgcgcgcgtcgc	Protospacer
 *   **********.********.******. **

13. spacer 1.3|82289|36|NZ_CP038216|CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 10, identity: 0.722

tgcgtcgggtggcggcggcgcgggtgcgcgcagcgg	CRISPR spacer
cgaaccccatggcggcggcgagggtgcgcgcatcga	Protospacer
.* ..*  .*********** *********** **.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

442627 : 453603

Streptococcus_phage(16.67%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004197486.1\|442627_444742_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7
WP_071897722.1\|444866_445055_-	hypothetical protein	NA	NA	NA	NA
WP_004526282.1\|445051_445561_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.2e-13	42.2
WP_071810810.1\|445752_445971_-	hypothetical protein	NA	NA	NA	NA
WP_004189780.1\|446233_446812_-	pseudouridine synthase	NA	NA	NA	NA
WP_004189552.1\|447079_448339_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_004189626.1\|448311_448494_-	hypothetical protein	NA	NA	NA	NA
WP_004546221.1\|448506_450126_+	multicopper oxidase family protein	NA	NA	NA	NA
WP_004196460.1\|450255_450459_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004194131.1\|450991_451306_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196461.1\|451302_453603_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1

DBSCAN-SWA_2

992638 : 999414

Burkholderia_virus(33.33%)

integrase

attL 990441:990461|attR 1016132:1016152

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
990441:990461	attL	NA	NA	NA	NA
WP_004192768.1\|992638_993340_-	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	9.9e-13	44.8
WP_004526695.1\|993636_994545_-	hypothetical protein	NA	NA	NA	NA
WP_029671251.1\|994740_994848_+	hypothetical protein	NA	NA	NA	NA
WP_004521810.1\|995092_995923_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_071810706.1\|996231_996660_-\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_009941993.1\|996610_996817_+	hypothetical protein	Q8W6S4	Burkholderia_virus	3.7e-16	86.7
WP_076846902.1\|996837_997176_-	hypothetical protein	A4PE26	Ralstonia_virus	3.2e-25	58.0
WP_076831547.1\|997541_997985_-	hypothetical protein	NA	NA	NA	NA
WP_038728719.1\|998019_998493_-	hypothetical protein	NA	NA	NA	NA
WP_038728717.1\|998485_998992_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.9e-19	39.4
WP_076838831.1\|998988_999414_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.3e-15	50.6
1016132:1016152	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2051696 : 2124679

uncultured_Caudovirales_phage(26.32%)

portal,head,protease,tail,plate,terminase,tRNA,capsid,integrase

attL 2096034:2096051|attR 2113722:2113739

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009931101.1\|2051696_2053166_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_004193249.1\|2053209_2054181_-	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_004205123.1\|2054284_2055223_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_004192752.1\|2055270_2056668_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.8e-42	33.8
WP_004191389.1\|2056956_2057622_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004191635.1\|2057678_2058254_+	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	5.3e-12	39.3
WP_004193779.1\|2058334_2058826_+	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	4.2e-10	33.3
WP_004550230.1\|2058850_2059651_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_009921276.1\|2059719_2059932_-	hypothetical protein	NA	NA	NA	NA
WP_004193377.1\|2059986_2060772_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_014917760.1\|2060962_2061877_-	RNA methyltransferase	NA	NA	NA	NA
WP_004532151.1\|2061873_2062125_-	hypothetical protein	NA	NA	NA	NA
WP_004191664.1\|2062168_2062972_+	inositol monophosphatase	NA	NA	NA	NA
WP_004527347.1\|2063240_2063513_-	hypothetical protein	NA	NA	NA	NA
WP_009921282.1\|2063541_2063793_+	hypothetical protein	NA	NA	NA	NA
WP_009954883.1\|2063696_2063912_-	hypothetical protein	NA	NA	NA	NA
WP_076809161.1\|2064243_2064435_+	hypothetical protein	NA	NA	NA	NA
WP_004192883.1\|2064420_2064648_-	hypothetical protein	NA	NA	NA	NA
WP_076853220.1\|2064710_2064950_+	DNA mismatch repair protein	NA	NA	NA	NA
WP_024430922.1\|2065149_2065983_-	hypothetical protein	NA	NA	NA	NA
WP_038714120.1\|2065979_2067119_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_080002259.1\|2067379_2067586_+	hypothetical protein	NA	NA	NA	NA
WP_004534654.1\|2067771_2069724_-	AAA family ATPase	NA	NA	NA	NA
WP_004534916.1\|2070068_2070518_-	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	1.8e-47	68.5
WP_004534728.1\|2070507_2070768_+	hypothetical protein	NA	NA	NA	NA
WP_122836968.1\|2071075_2072032_-	RNA-directed DNA polymerase	Q7M2A9	Enterobacteria_phage	1.7e-47	38.7
WP_122794587.1\|2072006_2072315_-	hypothetical protein	NA	NA	NA	NA
WP_004534755.1\|2073534_2073960_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	49.4
WP_004534452.1\|2073956_2074466_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	9.7e-18	37.7
WP_076910187.1\|2074807_2075407_+	hypothetical protein	NA	NA	NA	NA
WP_076812051.1\|2075838_2076147_+	hypothetical protein	A4PE26	Ralstonia_virus	5.0e-25	62.1
WP_076819500.1\|2076182_2076971_-	DNA adenine methylase	Q8W6S4	Burkholderia_virus	6.7e-151	96.6
WP_038712566.1\|2077114_2077660_-	lysozyme	Q8W6S5	Burkholderia_virus	1.0e-81	95.0
WP_050883818.1\|2077659_2078202_-	lysozyme	A4JX20	Burkholderia_virus	1.3e-84	90.6
WP_004533694.1\|2078194_2078389_-	hypothetical protein	NA	NA	NA	NA
WP_122656927.1\|2078464_2079517_-	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.0e-79	45.8
WP_004540041.1\|2079526_2079733_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.0e-15	61.2
WP_004547832.1\|2079707_2080589_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.5e-29	36.6
WP_076889983.1\|2080597_2083012_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.2e-69	33.5
WP_004552769.1\|2083099_2083402_-\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.5e-05	37.2
WP_004552768.1\|2083471_2083975_-\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	4.3e-42	50.6
WP_076900924.1\|2083985_2085155_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	8.1e-161	72.9
WP_009909071.1\|2085220_2085673_-\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	4.8e-45	77.7
WP_004552413.1\|2085688_2087152_-	hypothetical protein	A4JWL8	Burkholderia_virus	1.6e-214	78.2
WP_004547894.1\|2087139_2087715_-\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.0e-32	47.7
WP_004547860.1\|2087707_2088601_-\|plate	baseplate J protein	D5LGZ3	Escherichia_phage	6.4e-49	40.7
WP_004547840.1\|2088597_2088942_-	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004547866.1\|2088938_2089145_-	hypothetical protein	NA	NA	NA	NA
WP_122657137.1\|2089209_2089890_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	1.2e-18	34.4
WP_004533675.1\|2089892_2090426_-	hypothetical protein	Q9JML9	Wolbachia_phage	6.2e-23	39.5
WP_004539763.1\|2090415_2090946_-\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	9.2e-11	28.0
WP_004555262.1\|2090947_2091238_-	hypothetical protein	NA	NA	NA	NA
WP_004550216.1\|2091241_2092267_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	1.7e-109	59.1
WP_004539732.1\|2092301_2092646_-\|head	head decoration protein	NA	NA	NA	NA
WP_004555261.1\|2092672_2093773_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	7.9e-49	36.3
WP_122766286.1\|2093769_2095263_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	7.5e-135	51.2
WP_004533700.1\|2095259_2095466_-	hypothetical protein	NA	NA	NA	NA
WP_004552756.1\|2095476_2097462_-\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	2.1e-180	53.4
2096034:2096051	attL	NA	NA	NA	NA
WP_009935700.1\|2097424_2097994_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_024430516.1\|2098089_2098278_-	hypothetical protein	NA	NA	NA	NA
WP_123903064.1\|2098419_2098728_+	hypothetical protein	NA	NA	NA	NA
WP_123903065.1\|2098678_2099038_-	hypothetical protein	NA	NA	NA	NA
WP_017844234.1\|2099198_2099972_-	hypothetical protein	NA	NA	NA	NA
WP_150976906.1\|2100189_2102682_-	virulence protein E	A0A2D1GN57	Marinobacter_phage	4.7e-97	41.8
WP_004555257.1\|2102801_2103272_-	hypothetical protein	NA	NA	NA	NA
WP_024430956.1\|2103402_2103582_-	hypothetical protein	NA	NA	NA	NA
WP_004555256.1\|2103645_2104209_-	hypothetical protein	NA	NA	NA	NA
WP_143293908.1\|2104267_2104783_+	hypothetical protein	NA	NA	NA	NA
WP_004555255.1\|2104810_2105143_-	hypothetical protein	NA	NA	NA	NA
WP_009927752.1\|2105156_2105684_-	hypothetical protein	C7BGG0	Burkholderia_phage	9.7e-29	46.5
WP_085955187.1\|2105783_2105963_-	hypothetical protein	NA	NA	NA	NA
WP_076840169.1\|2106113_2106623_+	helix-turn-helix transcriptional regulator	G9L6A6	Escherichia_phage	3.6e-12	42.1
WP_038758334.1\|2106567_2107041_+	hypothetical protein	NA	NA	NA	NA
WP_004550209.1\|2107173_2107392_+	hypothetical protein	NA	NA	NA	NA
WP_004533940.1\|2107443_2107779_+	hypothetical protein	NA	NA	NA	NA
WP_038758333.1\|2107775_2108381_+	hypothetical protein	NA	NA	NA	NA
WP_004533966.1\|2108377_2108827_+	hypothetical protein	NA	NA	NA	NA
WP_150976904.1\|2108826_2110143_+	pyridoxal phosphate biosynthetic protein PdxJ	NA	NA	NA	NA
WP_004555250.1\|2110256_2110586_+	hypothetical protein	NA	NA	NA	NA
WP_004555249.1\|2110594_2111068_+	hypothetical protein	B5TA88	Burkholderia_phage	2.3e-05	71.4
WP_009890227.1\|2111076_2111319_+	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
WP_024430959.1\|2111269_2112571_-\|integrase	integrase family protein	C7BGE7	Burkholderia_phage	2.6e-147	58.7
WP_137984612.1\|2112742_2115415_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	9.3e-27	24.3
2113722:2113739	attR	NA	NA	NA	NA
WP_038741765.1\|2115401_2116700_+	hypothetical protein	NA	NA	NA	NA
WP_004524740.1\|2116679_2117225_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_076887471.1\|2117317_2118481_+	cupin domain-containing protein	NA	NA	NA	NA
WP_009904701.1\|2118537_2118807_+	hypothetical protein	NA	NA	NA	NA
WP_004550225.1\|2118712_2118967_+	lipoprotein	NA	NA	NA	NA
WP_076903200.1\|2119207_2119984_-	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	1.5e-09	26.6
WP_004544024.1\|2119988_2121131_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_004191516.1\|2121241_2122144_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_150976902.1\|2122188_2122806_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004191887.1\|2122802_2124005_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004192745.1\|2124013_2124679_-\|protease	site-2 protease family protein	NA	NA	NA	NA

DBSCAN-SWA_4

2413089 : 2421977

Tanapox_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004547474.1\|2413089_2413932_+	alpha/beta hydrolase	A7XCB7	Tanapox_virus	5.5e-18	27.0
WP_122656575.1\|2414274_2415198_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	3.2e-43	36.2
WP_151018678.1\|2415325_2416702_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004550116.1\|2416928_2417831_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_076853525.1\|2417842_2418169_-	hypothetical protein	NA	NA	NA	NA
WP_004189725.1\|2418181_2418499_-	competence protein ComE	NA	NA	NA	NA
WP_004190173.1\|2418570_2419563_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_004522359.1\|2419621_2420608_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	6.7e-15	26.8
WP_004522358.1\|2420576_2421977_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-79	38.5

DBSCAN-SWA_5

2759238 : 2768493

unidentified_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522151.1\|2759238_2760786_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2
WP_009971015.1\|2760822_2761350_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004532195.1\|2761346_2762030_+	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004194137.1\|2762094_2762910_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_058040641.1\|2763092_2765111_-	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	7.0e-51	34.2
WP_004533593.1\|2765144_2766275_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	3.8e-22	27.6
WP_004194034.1\|2766540_2768493_-	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2

DBSCAN-SWA_6

3052973 : 3111301

Burkholderia_phage(27.27%)

tail,plate,tRNA,transposase,integrase

attL 3057194:3057211|attR 3114495:3114512

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004521984.1\|3052973_3054272_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_004527811.1\|3054338_3055421_+	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_004534980.1\|3055464_3056322_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_004186955.1\|3056401_3056710_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_004521981.1\|3056724_3057321_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA
3057194:3057211	attL	NA	NA	NA	NA
WP_004545630.1\|3057605_3058394_+	dioxygenase	NA	NA	NA	NA
WP_004527813.1\|3058841_3060443_-	APC family permease	NA	NA	NA	NA
WP_004196837.1\|3060876_3061080_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.3e-21	73.1
WP_076841889.1\|3061066_3061204_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_150976838.1\|3061266_3062529_-	Hsp70 family protein	NA	NA	NA	NA
WP_122658173.1\|3062652_3062925_+	hypothetical protein	NA	NA	NA	NA
WP_004198059.1\|3063191_3063797_-	nitroreductase family protein	NA	NA	NA	NA
WP_004198060.1\|3063758_3064334_+	hypothetical protein	NA	NA	NA	NA
WP_004535445.1\|3064293_3065577_-	MFS transporter	NA	NA	NA	NA
WP_151018681.1\|3065735_3066404_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_076808608.1\|3066394_3066745_+	hypothetical protein	NA	NA	NA	NA
WP_004527819.1\|3066741_3067365_+	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_004527820.1\|3067449_3068352_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004535007.1\|3068479_3069616_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_075018965.1\|3069612_3069828_-	hypothetical protein	NA	NA	NA	NA
WP_075018814.1\|3069775_3069898_+	aromatic ring-opening dioxygenase LigA	NA	NA	NA	NA
WP_004535015.1\|3069972_3071091_-	acyltransferase	NA	NA	NA	NA
WP_150976833.1\|3071089_3071569_+	hypothetical protein	NA	NA	NA	NA
WP_011205258.1\|3071528_3071975_-	hypothetical protein	NA	NA	NA	NA
WP_004527825.1\|3072335_3072458_-	hypothetical protein	NA	NA	NA	NA
WP_009932025.1\|3072501_3072597_-	hypothetical protein	NA	NA	NA	NA
WP_038763718.1\|3072635_3074801_+	peptidase M1	A0A0P0IY26	Acinetobacter_phage	1.9e-46	27.1
WP_150976831.1\|3074758_3075019_-	hypothetical protein	NA	NA	NA	NA
WP_071893038.1\|3075382_3075781_+	hypothetical protein	NA	NA	NA	NA
WP_011205259.1\|3075823_3076093_+	hypothetical protein	NA	NA	NA	NA
WP_004204906.1\|3076195_3076426_+	hypothetical protein	NA	NA	NA	NA
WP_004553843.1\|3076502_3076685_-	hypothetical protein	NA	NA	NA	NA
WP_004521964.1\|3076659_3077016_-	hypothetical protein	NA	NA	NA	NA
WP_004199991.1\|3077041_3078310_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_076891085.1\|3078324_3080586_+	peptidase domain-containing ABC transporter	A0A2R8FG22	Brazilian_cedratvirus	2.3e-10	31.9
WP_009932031.1\|3080582_3082031_+	TolC family protein	NA	NA	NA	NA
WP_004521961.1\|3082015_3082165_+	hypothetical protein	NA	NA	NA	NA
WP_004527832.1\|3083237_3084203_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_009922418.1\|3084220_3084499_+	hypothetical protein	NA	NA	NA	NA
WP_004200003.1\|3088363_3089353_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_151018682.1\|3089371_3090289_+	OmpA family protein	NA	NA	NA	NA
WP_004521957.1\|3090487_3091609_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004202807.1\|3091698_3094368_-	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	3.8e-89	32.0
WP_004200010.1\|3094401_3095502_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_011205262.1\|3095465_3097292_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_011205263.1\|3097383_3097896_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527837.1\|3097923_3098427_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004521953.1\|3098499_3099990_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004521952.1\|3100006_3100525_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004531875.1\|3100561_3101233_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521950.1\|3101607_3102222_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004521949.1\|3102330_3103677_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521948.1\|3103673_3104459_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004547581.1\|3104560_3104926_+	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	1.5e-52	88.4
WP_111963042.1\|3105029_3105620_-	hypothetical protein	NA	NA	NA	NA
WP_122798709.1\|3106015_3106519_-	site-specific DNA-methyltransferase	K4NZW3	Burkholderia_phage	2.1e-81	90.6
WP_028358682.1\|3106515_3106929_-\|tail	phage tail protein I	K4NXA0	Burkholderia_phage	6.8e-70	99.2
WP_123903074.1\|3107016_3107544_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	S5WIU1	Leptospira_phage	5.1e-30	49.2
WP_100209513.1\|3107468_3107984_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	4.0e-27	52.5
WP_004555440.1\|3107942_3110240_-	S8 family peptidase	NA	NA	NA	NA
WP_004555439.1\|3110296_3111301_-	AAA family ATPase	Q677Q6	Lymphocystis_disease_virus	2.6e-14	31.7
3114495:3114512	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3333836 : 3345065

Burkholderia_phage(22.22%)

integrase

attL 3335109:3335125|attR 3342950:3342966

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076859550.1\|3333836_3334538_-	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	3.7e-07	30.5
3335109:3335125	attL	NA	NA	NA	NA
WP_004525721.1\|3335381_3335630_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004530408.1\|3335786_3336866_-	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_009932249.1\|3336865_3337318_-	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_009932250.1\|3337575_3338118_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_004530410.1\|3338371_3339289_-	hypothetical protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009922658.1\|3339288_3339606_-	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004533467.1\|3339985_3340729_-\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	1.9e-54	47.3
WP_076804979.1\|3340744_3340924_+	hypothetical protein	NA	NA	NA	NA
WP_004202928.1\|3341755_3342655_+	cytochrome c	NA	NA	NA	NA
WP_004524472.1\|3342977_3345065_-	AAA family ATPase	A7KV33	Bacillus_phage	1.9e-99	35.8
3342950:3342966	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP038217

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP038217_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038217_1

235095-235187

Orphan

Consensus_repeat	Method
TCGCCGCCGCGCGCGACGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP038217_1

>merge|NZ_CP038217|1|235095-235187|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGCTGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGATCGCCGCCGCGCGCGCCGACGCGC

>NZ_CP038217|1|1|235095-235187|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGC	TGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGA
TCGCCGCCGCGCGCGCCGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038217.1\|WP_004524985.1\|233624_233933_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP038217.1\|WP_004198321.1\|238704_239730_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP038217.1\|WP_004524990.1\|241417_242983_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP038217.1\|WP_004188221.1\|232688_233144_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP038217.1\|WP_004524989.1\|240367_240877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038217.1\|WP_050020039.1\|227545_228976_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP038217.1\|WP_004529183.1\|231112_232699_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP038217.1\|WP_011204277.1\|225895_226066_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038217.1\|WP_004187346.1\|233929_234631_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP038217.1\|WP_004529182.1\|233140_233632_+\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP038217.1\|WP_004524981.1\|230883_231141_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038217.1\|WP_004533337.1\|237625_238474_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP038217.1\|WP_150977093.1\|246456_249687_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP038217.1\|WP_044363669.1\|239806_240310_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038217.1\|WP_004529184.1\|226370_227549_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP038217.1\|WP_004530245.1\|245329_246454_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP038217.1\|WP_076802063.1\|243074_243233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038217.1\|WP_004187193.1\|234627_234876_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP038217.1\|WP_058040623.1\|235622_237629_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP038217.1\|WP_004530244.1\|243344_245180_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425

Protein	Function_ID	Function_description	E-value
NZ_CP038217.1\|WP_004524985.1\|233624_233933_+\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP038217.1\|WP_004198321.1\|238704_239730_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP038217.1\|WP_004524990.1\|241417_242983_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP038217.1\|WP_004188221.1\|232688_233144_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP038217.1\|WP_050020039.1\|227545_228976_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP038217.1\|WP_004529183.1\|231112_232699_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP038217.1\|WP_004187346.1\|233929_234631_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP038217.1\|WP_004529182.1\|233140_233632_+\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.86601e-17
NZ_CP038217.1\|WP_004530245.1\|245329_246454_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	4.38049e-26
NZ_CP038217.1\|WP_004533337.1\|237625_238474_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP038217.1\|WP_150977093.1\|246456_249687_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.54147e-92
NZ_CP038217.1\|WP_004529184.1\|226370_227549_-\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP038217.1\|WP_004187193.1\|234627_234876_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP038217.1\|WP_058040623.1\|235622_237629_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP038217.1\|WP_004530244.1\|243344_245180_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	6.14575e-132

>NZ_CP038217.1|WP_004187193.1|234627_234876_+|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP038217.1|WP_004187346.1|233929_234631_+|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP038217.1|WP_004524985.1|233624_233933_+|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP038217.1|WP_004529182.1|233140_233632_+|AtpZ/AtpI-family-protein
MMKRRPPEVKREARDDAARGDARHAGAGAAPDDPRGAARRDPPPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP038217.1|WP_004188221.1|232688_233144_+|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP038217.1|WP_004529183.1|231112_232699_+|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDARDEGAGRVVAVRGAVIDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP038217.1|WP_004524981.1|230883_231141_-|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP038217.1|WP_050020039.1|227545_228976_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MCSRNKECRVDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP038217.1|WP_004529184.1|226370_227549_-|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP038217.1|WP_011204277.1|225895_226066_+|hypothetical-protein
MLVSRAHGPKLRRRRARARRQSPAAILPRDLLQLRPLRARPLSAPADAARVATDDR
>NZ_CP038217.1|WP_058040623.1|235622_237629_+|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSREVSHEANRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVNADANVDAEAEARHKR
>NZ_CP038217.1|WP_004533337.1|237625_238474_+|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP038217.1|WP_004198321.1|238704_239730_+|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGATFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP038217.1|WP_044363669.1|239806_240310_+|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREARAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHPGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP038217.1|WP_004524989.1|240367_240877_-|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP038217.1|WP_004524990.1|241417_242983_+|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP038217.1|WP_076802063.1|243074_243233_-|hypothetical-protein
MRARRSHGAGIRLGFDKPSGAHSSTHDGWIQTDIAMRLPQISLMPDQALANE
>NZ_CP038217.1|WP_004530244.1|243344_245180_-|response-regulator
MHVEVFAQHPSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLEAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP038217.1|WP_004530245.1|245329_246454_-|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP038217.1|WP_150977093.1|246456_249687_-|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGERPGAGERAAGESVAGRGAASDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSDVGSDVGSEVASEAGLAASAESGSERGVAHGAERAREPAADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHELYSQFWPLAASVPVILGATILLLKKQER

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

15997 : 70609

Leptospira_phage(16.67%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038802950.1\|15997_17118_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_055315292.1\|17534_18476_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024429095.1\|18572_19910_+	D-serine ammonia-lyase	NA	NA	NA	NA
WP_004552203.1\|20081_20996_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004524799.1\|21177_21882_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004190854.1\|22374_22551_-	hypothetical protein	NA	NA	NA	NA
WP_004205458.1\|22599_22917_-	chorismate lyase	NA	NA	NA	NA
WP_071898311.1\|22853_23099_-	chorismate lyase	NA	NA	NA	NA
WP_024429094.1\|23226_24471_-	flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_004544579.1\|24735_24921_-	hypothetical protein	NA	NA	NA	NA
WP_024429093.1\|24939_26838_+	DUF3857 domain-containing protein	NA	NA	NA	NA
WP_004533164.1\|26880_28317_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004190377.1\|28371_28773_-	lipoprotein	NA	NA	NA	NA
WP_004190712.1\|29411_29930_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004190585.1\|29926_31330_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004190689.1\|31345_32662_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_004524806.1\|32664_36294_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_076891691.1\|36299_37196_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004529325.1\|37180_37408_-	hypothetical protein	NA	NA	NA	NA
WP_122804786.1\|37406_39992_+	protein kinase	M1I231	Acanthocystis_turfacea_Chlorella_virus	5.0e-09	26.6
WP_004524810.1\|41185_41764_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004190849.1\|41756_43265_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004190698.1\|43324_43816_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004196148.1\|43834_44395_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004553897.1\|44399_46271_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_100227576.1\|46267_47713_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004533146.1\|47725_50392_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_004203275.1\|50388_52593_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
WP_076812934.1\|52608_53319_+	hypothetical protein	NA	NA	NA	NA
WP_050376279.1\|53278_54538_+	DUF746 domain-containing protein	NA	NA	NA	NA
WP_004552182.1\|55269_56055_-	hypothetical protein	NA	NA	NA	NA
WP_009927050.1\|57447_58506_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_076812937.1\|58502_58715_-	hypothetical protein	NA	NA	NA	NA
WP_131201358.1\|59009_59444_+	hypothetical protein	NA	NA	NA	NA
WP_009935227.1\|60278_60917_+	hypothetical protein	NA	NA	NA	NA
WP_004524825.1\|60959_62204_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
WP_004524827.1\|62239_63481_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004544732.1\|63513_64467_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004524829.1\|64467_65319_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004546333.1\|65323_67495_+	alpha-galactosidase	NA	NA	NA	NA
WP_004530171.1\|67735_69769_+	hypothetical protein	NA	NA	NA	NA
WP_004524833.1\|70201_70609_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.2e-11	36.5

DBSCAN-SWA_2

436613 : 479918

Streptococcus_phage(20.0%)

integrase,portal,protease,transposase,tRNA

attL 444161:444177|attR 486606:486622

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004553592.1\|436613_436901_-\|portal	phage portal protein	K4NZV0	Burkholderia_phage	1.7e-43	94.4
WP_004529037.1\|437144_437282_+	hypothetical protein	NA	NA	NA	NA
WP_123875335.1\|437530_437719_-	hypothetical protein	NA	NA	NA	NA
WP_004529035.1\|437835_439062_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_009934949.1\|439068_439242_-	hypothetical protein	NA	NA	NA	NA
WP_009934948.1\|439240_439504_+	hypothetical protein	NA	NA	NA	NA
WP_009926491.1\|439428_439605_+	hypothetical protein	NA	NA	NA	NA
WP_009934946.1\|439940_440432_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004529031.1\|441091_441376_-	hypothetical protein	NA	NA	NA	NA
WP_004190924.1\|441527_441797_-	hypothetical protein	NA	NA	NA	NA
WP_004530319.1\|441793_442543_-	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	5.6e-22	37.8
WP_076913543.1\|442544_445316_+	DNA polymerase I	S5M8J1	Bacillus_phage	4.9e-71	30.0
444161:444177	attL	NA	NA	NA	NA
WP_004190401.1\|445625_447008_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_009950019.1\|447333_449127_-	membrane protein	NA	NA	NA	NA
WP_009934941.1\|449300_449393_+	hypothetical protein	NA	NA	NA	NA
WP_004525140.1\|449465_449687_+	hypothetical protein	NA	NA	NA	NA
WP_004190499.1\|449846_450722_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_004190656.1\|450780_451650_-	sulfurtransferase	NA	NA	NA	NA
WP_004190814.1\|451797_452904_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004190549.1\|453173_453467_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_004525142.1\|453463_454348_+	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_004525143.1\|454431_456336_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_004195713.1\|456486_457296_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_004538372.1\|457414_458878_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	6.8e-80	38.6
WP_004190933.1\|459317_461360_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	4.2e-35	32.0
WP_004549232.1\|461418_461757_+	hypothetical protein	NA	NA	NA	NA
WP_004530325.1\|461803_463678_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.4e-66	36.0
WP_004190948.1\|463772_464219_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	8.8e-23	48.6
WP_004190342.1\|464385_464598_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_004530324.1\|464677_465901_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_004552017.1\|466040_467081_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-93	53.1
WP_004538372.1\|467486_468950_-\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	6.8e-80	38.6
WP_025991576.1\|469040_469235_-	hypothetical protein	NA	NA	NA	NA
WP_009935574.1\|469597_470320_-\|integrase	integrase catalytic region	NA	NA	NA	NA
WP_009935573.1\|470456_470717_+	hypothetical protein	NA	NA	NA	NA
WP_058040323.1\|471959_478559_+	DUF3320 domain-containing protein	NA	NA	NA	NA
WP_038802333.1\|478798_479918_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
486606:486622	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1611488 : 1722427

Burkholderia_phage(91.49%)

integrase,protease,terminase,transposase,tail,plate

attL 1641324:1641343|attR 1712122:1712141

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004526384.1\|1611488_1612751_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_004551638.1\|1614621_1615854_-	sodium/hydrogen exchanger	NA	NA	NA	NA
WP_004528257.1\|1616273_1616408_-	hypothetical protein	NA	NA	NA	NA
1641324:1641343	attL	NA	NA	NA	NA
WP_150977238.1\|1662941_1667636_+	DUF2156 domain-containing protein	NA	NA	NA	NA
WP_009957834.1\|1667718_1669377_+	halogenase	NA	NA	NA	NA
WP_004539123.1\|1669459_1670902_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	2.4e-53	37.5
WP_151018701.1\|1671525_1673445_-	CBS domain-containing protein	NA	NA	NA	NA
WP_004524104.1\|1673479_1673893_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004528269.1\|1674033_1675227_-	HPP family protein	NA	NA	NA	NA
WP_004524105.1\|1675288_1675552_-	hypothetical protein	NA	NA	NA	NA
WP_004198340.1\|1675572_1676544_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_038719591.1\|1676589_1676952_+	hypothetical protein	NA	NA	NA	NA
WP_004524106.1\|1677095_1678181_-	ionic transporter y4hA	NA	NA	NA	NA
WP_004542782.1\|1678908_1679697_+	MarC family protein	NA	NA	NA	NA
WP_004198335.1\|1679684_1679840_-	hypothetical protein	NA	NA	NA	NA
WP_004199327.1\|1680043_1680916_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004199325.1\|1681127_1681832_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_011205503.1\|1682007_1683054_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004199295.1\|1683730_1683889_+	lipoprotein	NA	NA	NA	NA
WP_004199294.1\|1683904_1684426_+	sigma-70 family RNA polymerase sigma factor	A0A076YQ50	Rhizobium_phage	5.1e-06	27.1
WP_004551650.1\|1684422_1685247_+	anti-sigma factor	NA	NA	NA	NA
WP_004198481.1\|1686340_1686700_+	hypothetical protein	NA	NA	NA	NA
WP_017882257.1\|1686696_1686924_+	hypothetical protein	NA	NA	NA	NA
WP_076886874.1\|1686920_1687139_+	hypothetical protein	NA	NA	NA	NA
WP_038791906.1\|1687258_1687693_-\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	2.3e-44	76.5
WP_009927864.1\|1687706_1688993_-	hypothetical protein	A4JWL8	Burkholderia_virus	6.5e-127	61.9
WP_009927863.1\|1689004_1689601_-	DUF2313 domain-containing protein	B5TAB0	Burkholderia_phage	2.0e-59	61.7
WP_076949407.1\|1689600_1690722_-\|plate	baseplate J/gp47 family protein	B5TAA9	Burkholderia_phage	6.9e-149	70.8
WP_038724610.1\|1690718_1691306_-\|tail	tail protein	B5TAA8	Burkholderia_phage	9.0e-76	67.7
WP_100565532.1\|1691391_1691886_-\|plate	baseplate assembly protein	B5TAA7	Burkholderia_phage	2.0e-52	62.0
WP_009927857.1\|1691882_1693049_-	bacteriophage Mu P	B5TAA6	Burkholderia_phage	8.9e-184	80.3
WP_100565531.1\|1693052_1694429_-	multidrug DMT transporter	B5TAA5	Burkholderia_phage	1.2e-192	74.0
WP_100565530.1\|1694428_1697104_-\|tail	phage tail protein	B5TAA4	Burkholderia_phage	3.0e-203	60.4
WP_058040209.1\|1697152_1697701_-	hypothetical protein	B5TAA3	Burkholderia_phage	6.9e-62	67.9
WP_038724605.1\|1697794_1698166_-	hypothetical protein	B5TAA2	Burkholderia_phage	1.2e-46	72.4
WP_058040208.1\|1698212_1699691_-\|tail	phage tail protein	B5TAA1	Burkholderia_phage	6.8e-221	76.0
WP_058040207.1\|1699737_1700004_-	hypothetical protein	B5TAA0	Burkholderia_phage	1.4e-15	63.2
WP_058040206.1\|1699990_1700587_-	DUF1834 family protein	B5TA99	Burkholderia_phage	7.8e-51	51.8
WP_058040205.1\|1700586_1701021_-	virion morphogenesis protein	B5TA98	Burkholderia_phage	1.3e-55	75.7
WP_058040204.1\|1701017_1701521_-	DUF1320 domain-containing protein	B5TA97	Burkholderia_phage	2.0e-87	91.6
WP_076949414.1\|1701517_1701919_-	hypothetical protein	B5TA96	Burkholderia_phage	8.5e-09	67.9
WP_038755861.1\|1701992_1702940_-	hypothetical protein	B5TA95	Burkholderia_phage	9.8e-165	92.7
WP_150977234.1\|1702995_1703352_-	hypothetical protein	B5TA94	Burkholderia_phage	7.4e-41	76.3
WP_009927838.1\|1703396_1704545_-	hypothetical protein	B5TA92	Burkholderia_phage	9.1e-181	83.1
WP_150977232.1\|1704760_1705162_-	hypothetical protein	B5TA91	Burkholderia_phage	1.4e-59	86.5
WP_058040201.1\|1705158_1705593_-	regulatory protein GemA	B5TA90	Burkholderia_phage	2.4e-57	81.7
WP_009927831.1\|1705594_1705906_-	hypothetical protein	B5TA89	Burkholderia_phage	4.4e-29	63.6
WP_058040200.1\|1706057_1706375_-	hypothetical protein	B5TA88	Burkholderia_phage	2.2e-07	68.3
WP_058040199.1\|1706463_1706736_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	3.3e-33	85.6
WP_058040198.1\|1706799_1707192_-	ASCH domain-containing protein	B5TA86	Burkholderia_phage	8.7e-59	82.3
WP_038724592.1\|1707205_1707832_-	DUF3164 family protein	B5TA85	Burkholderia_phage	3.3e-100	90.4
WP_058040197.1\|1707828_1708416_-	hypothetical protein	B5TA84	Burkholderia_phage	1.3e-82	91.8
WP_038721762.1\|1708402_1708708_-	hypothetical protein	B5TA83	Burkholderia_phage	6.4e-33	73.3
WP_038790982.1\|1708704_1708893_-	hypothetical protein	B5TA82	Burkholderia_phage	5.9e-13	65.5
WP_009927794.1\|1708900_1709893_-	AAA family ATPase	B5TA81	Burkholderia_phage	1.1e-166	87.9
WP_058040196.1\|1709902_1711528_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	B5TA80	Burkholderia_phage	2.0e-303	95.6
WP_058040195.1\|1711567_1712614_-	hypothetical protein	B5TA79	Burkholderia_phage	2.4e-135	77.3
1712122:1712141	attR	NA	NA	NA	NA
WP_009927791.1\|1712610_1712802_-	DNA-binding protein	B5TA78	Burkholderia_phage	2.7e-21	89.3
WP_038724587.1\|1712883_1713369_+	helix-turn-helix transcriptional regulator	B5TA77	Burkholderia_phage	1.3e-51	72.0
WP_038756160.1\|1713412_1713946_+	hypothetical protein	B5TA76	Burkholderia_phage	9.1e-67	74.6
WP_009927787.1\|1714311_1714794_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_058040194.1\|1714790_1715063_+	hypothetical protein	NA	NA	NA	NA
WP_038721770.1\|1715183_1715495_+	membrane protein	B5TA74	Burkholderia_phage	4.4e-37	70.2
WP_058040193.1\|1715491_1716166_+	lytic transglycosylase domain-containing protein	B5TA73	Burkholderia_phage	6.9e-88	70.1
WP_076949408.1\|1716162_1716627_+	hypothetical protein	NA	NA	NA	NA
WP_038724579.1\|1716734_1716956_+	hypothetical protein	B5TA71	Burkholderia_phage	4.3e-31	89.0
WP_009927781.1\|1716952_1717243_+	hypothetical protein	B5TA70	Burkholderia_phage	1.3e-40	89.6
WP_038755846.1\|1717246_1717744_+	DUF1804 family protein	B5TA69	Burkholderia_phage	3.5e-81	93.9
WP_150977229.1\|1717750_1719367_+\|terminase	phage terminase large subunit	B5TA68	Burkholderia_phage	6.3e-305	92.8
WP_058040191.1\|1719356_1720889_+	DUF935 family protein	B5TA67	Burkholderia_phage	2.9e-251	89.5
WP_009927776.1\|1720933_1721194_+	hypothetical protein	B5TA66	Burkholderia_phage	1.0e-23	72.1
WP_038791867.1\|1721194_1722427_+	hypothetical protein	B5TA65	Burkholderia_phage	6.1e-215	89.0

DBSCAN-SWA_4

2720762 : 2785317

Xanthomonas_phage(20.0%)

holin,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004523686.1\|2720762_2721281_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004523687.1\|2721282_2723163_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004523688.1\|2723159_2724209_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004529651.1\|2724227_2725298_+	type VI secretion protein ImpA	NA	NA	NA	NA
WP_004529650.1\|2725352_2726381_+	fimbrial protein	NA	NA	NA	NA
WP_004531572.1\|2726413_2727772_+	hypothetical protein	A0A292GJ55	Xanthomonas_phage	3.4e-110	45.2
WP_150977038.1\|2727664_2731117_-	RHS repeat protein	NA	NA	NA	NA
WP_004523693.1\|2731129_2731399_-	PAAR motif protein	NA	NA	NA	NA
WP_122799165.1\|2731473_2734119_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.2e-35	26.0
WP_009932439.1\|2734183_2734753_-	hypothetical protein	NA	NA	NA	NA
WP_009932436.1\|2734942_2738851_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_009932435.1\|2738865_2740167_-	type VI secretion system protein TssL	NA	NA	NA	NA
WP_004523698.1\|2740163_2741513_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_095413485.1\|2741518_2742061_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004529642.1\|2742188_2742671_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004523699.1\|2742870_2744370_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004523700.1\|2744403_2744943_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_076892803.1\|2744988_2745186_-	hypothetical protein	NA	NA	NA	NA
WP_009932432.1\|2745332_2747009_-	OmpA family protein	NA	NA	NA	NA
WP_076892806.1\|2747011_2747668_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004529637.1\|2747732_2748305_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_076866615.1\|2748297_2750931_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_025991399.1\|2751154_2751892_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004523706.1\|2751956_2752502_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_004549711.1\|2753086_2753641_+	hypothetical protein	NA	NA	NA	NA
WP_004523708.1\|2753651_2753867_-	hypothetical protein	NA	NA	NA	NA
WP_004551161.1\|2753902_2755390_+	hypothetical protein	NA	NA	NA	NA
WP_150977312.1\|2755456_2757562_-	hypothetical protein	A0A2C9CZG8	Yersinia_phage	4.9e-07	46.1
WP_076809385.1\|2758290_2758755_-	hypothetical protein	NA	NA	NA	NA
WP_004523712.1\|2758766_2758955_+	hypothetical protein	NA	NA	NA	NA
WP_151018709.1\|2759114_2760572_+	hypothetical protein	NA	NA	NA	NA
WP_009932423.1\|2761201_2761456_+	hypothetical protein	NA	NA	NA	NA
WP_009932421.1\|2761483_2761771_-	hypothetical protein	NA	NA	NA	NA
WP_004523716.1\|2761720_2763316_+	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	1.9e-06	33.3
WP_076892633.1\|2763402_2764026_+	DUF2244 domain-containing protein	NA	NA	NA	NA
WP_038735890.1\|2764030_2764219_+	hypothetical protein	NA	NA	NA	NA
WP_009932418.1\|2764258_2764573_-	hypothetical protein	NA	NA	NA	NA
WP_004531587.1\|2764611_2765304_-	hypothetical protein	NA	NA	NA	NA
WP_004531588.1\|2765315_2765543_-	hypothetical protein	NA	NA	NA	NA
WP_004529617.1\|2765474_2765690_+	hypothetical protein	NA	NA	NA	NA
WP_004523720.1\|2765775_2766102_+	thioredoxin family protein	NA	NA	NA	NA
WP_004523721.1\|2766121_2766541_+	YjbQ family protein	NA	NA	NA	NA
WP_004524152.1\|2766955_2767219_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_150977040.1\|2767228_2768764_-	DUF2875 domain-containing protein	NA	NA	NA	NA
WP_004528499.1\|2774254_2774560_-	H-NS histone family protein	NA	NA	NA	NA
WP_004531014.1\|2774669_2775890_-\|transposase	ISL3-like element ISBma1 family transposase	A9YX10	Burkholderia_phage	1.1e-240	100.0
WP_004523726.1\|2776515_2777547_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_004544882.1\|2777543_2778398_-	ABC transporter permease	NA	NA	NA	NA
WP_004523728.1\|2778384_2779302_-	ABC transporter permease	NA	NA	NA	NA
WP_004558008.1\|2779763_2780216_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_099975938.1\|2780179_2781220_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_076805246.1\|2782768_2782924_-	hypothetical protein	NA	NA	NA	NA
WP_004187738.1\|2783121_2785317_-\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP038216

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP038217

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection