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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP038219 Burkholderia pseudomallei strain Yap5 chromosome 2, complete sequence 2 crisprs csa3,cas3,DinG 0 0 5 0
NZ_CP038218 Burkholderia pseudomallei strain Yap5 chromosome 1, complete sequence 0 crisprs cas3,DEDDh,csa3,RT,DinG 0 0 8 0

Results visualization

1. NZ_CP038219
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038219_1 659966-660058 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP038219_2 1072029-1072174 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 415196 : 458517 37 Streptococcus_phage(20.0%) tRNA,transposase,portal,integrase,protease attL 411393:411411|attR 451638:451656
DBSCAN-SWA_2 793021 : 851278 41 Streptococcus_phage(22.22%) plate,transposase NA
DBSCAN-SWA_3 1257901 : 1322459 55 Ralstonia_phage(28.57%) holin,plate,transposase NA
DBSCAN-SWA_4 1870805 : 1942383 58 Vibrio_phage(25.0%) holin,plate NA
DBSCAN-SWA_5 2503191 : 2614126 78 Burkholderia_phage(86.0%) plate,transposase,tail,integrase,protease,terminase attL 2533009:2533028|attR 2603821:2603840
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP038218
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 237949 : 247205 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 584480 : 593362 9 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_3 883476 : 956461 93 uncultured_Caudovirales_phage(26.32%) integrase,protease,head,plate,capsid,tail,portal,terminase,tRNA attL 880138:880155|attR 955859:955876
DBSCAN-SWA_4 2007714 : 2014490 11 Burkholderia_virus(33.33%) integrase attL 1999625:1999640|attR 2011283:2011298
DBSCAN-SWA_5 2553563 : 2564539 11 Agrobacterium_phage(16.67%) protease NA
DBSCAN-SWA_6 3318475 : 3374882 54 Vibrio_phage(15.38%) integrase,protease,transposase,portal,tRNA attL 3312406:3312426|attR 3381151:3381171
DBSCAN-SWA_7 3596038 : 3607267 11 Burkholderia_virus(22.22%) integrase attL 3593443:3593459|attR 3610048:3610064
DBSCAN-SWA_8 3828631 : 3843736 17 Burkholderia_phage(42.86%) integrase,protease,plate,transposase,tail attL 3825239:3825255|attR 3834284:3834300
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage