CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP038226	Burkholderia pseudomallei strain Yap1 chromosome 1, complete sequence	0 crisprs	cas3,DEDDh,csa3,RT,DinG	0	0	7	0
NZ_CP038227	Burkholderia pseudomallei strain Yap1 chromosome 2, complete sequence	4 crisprs	csa3,cas3,DinG	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP038227_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038227_1

362258-362350

Orphan

Consensus_repeat	Method
GCGCGTCGGCGCGCGCGGCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP038227_1

>merge|NZ_CP038227|1|362258-362350|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGATCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCAGCGCGTCGTCGCGCGCGGCGGCGA

>NZ_CP038227|1|1|362258-362350|CRISPRCasFinder
GCGCGTCGGCGCGCGCGGCGGCGA	TCAGCCGCTCGCGCTCGGCGGCGGCCTGCGCGAGCGCGTCCTTCA
GCGCGTCGTCGCGCGCGGCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038227.1\|WP_004529183.1\|364745_366332_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP038227.1\|WP_004524985.1\|363511_363820_-\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP038227.1\|WP_004188221.1\|364300_364756_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP038227.1\|WP_150977093.1\|347757_350988_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP038227.1\|WP_004529184.1\|369896_371075_+\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP038227.1\|WP_004188840.1\|366692_368486_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP038227.1\|WP_004187193.1\|362568_362817_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP038227.1\|WP_004530244.1\|352264_354100_+\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP038227.1\|WP_044363669.1\|357134_357638_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004198321.1\|357714_358740_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP038227.1\|WP_004524981.1\|366303_366561_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004529182.1\|363812_364304_-\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP038227.1\|WP_058040623.1\|359815_361822_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP038227.1\|WP_076802063.1\|354211_354370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004524989.1\|356567_357077_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004187346.1\|362813_363515_-\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP038227.1\|WP_004533337.1\|358970_359819_-\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP038227.1\|WP_004524990.1\|354461_356027_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP038227.1\|WP_004530245.1\|350990_352115_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP038227.1\|WP_050020039.1\|368469_369900_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180

Protein	Function_ID	Function_description	E-value
NZ_CP038227.1\|WP_004529183.1\|364745_366332_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP038227.1\|WP_004524985.1\|363511_363820_-\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP038227.1\|WP_150977093.1\|347757_350988_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.54147e-92
NZ_CP038227.1\|WP_004187193.1\|362568_362817_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP038227.1\|WP_004530244.1\|352264_354100_+\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	6.14575e-132
NZ_CP038227.1\|WP_004529184.1\|369896_371075_+\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP038227.1\|WP_004198321.1\|357714_358740_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP038227.1\|WP_004530245.1\|350990_352115_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	4.38049e-26
NZ_CP038227.1\|WP_058040623.1\|359815_361822_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP038227.1\|WP_004188840.1\|366692_368486_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	6.3979e-179
NZ_CP038227.1\|WP_004188221.1\|364300_364756_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP038227.1\|WP_004187346.1\|362813_363515_-\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP038227.1\|WP_004533337.1\|358970_359819_-\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP038227.1\|WP_004524990.1\|354461_356027_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP038227.1\|WP_004529182.1\|363812_364304_-\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.86601e-17
NZ_CP038227.1\|WP_050020039.1\|368469_369900_+\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0

>NZ_CP038227.1|WP_058040623.1|359815_361822_-|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSPEASREVSREVSREVSHEANRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVNADANVDAEAEARHKR
>NZ_CP038227.1|WP_004533337.1|358970_359819_-|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP038227.1|WP_004198321.1|357714_358740_-|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGATFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP038227.1|WP_044363669.1|357134_357638_-|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREARAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHPGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP038227.1|WP_004524989.1|356567_357077_+|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP038227.1|WP_004524990.1|354461_356027_-|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP038227.1|WP_076802063.1|354211_354370_+|hypothetical-protein
MRARRSHGAGIRLGFDKPSGAHSSTHDGWIQTDIAMRLPQISLMPDQALANE
>NZ_CP038227.1|WP_004530244.1|352264_354100_+|response-regulator
MHVEVFAQHPSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLEAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP038227.1|WP_004530245.1|350990_352115_+|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP038227.1|WP_150977093.1|347757_350988_+|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGERPGAGERAAGESVAGRGAASDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSDVGSDVGSEVASEAGLAASAESGSERGVAHGAERAREPAADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHELYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP038227.1|WP_004187193.1|362568_362817_-|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP038227.1|WP_004187346.1|362813_363515_-|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP038227.1|WP_004524985.1|363511_363820_-|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP038227.1|WP_004529182.1|363812_364304_-|AtpZ/AtpI-family-protein
MMKRRPPEVKREARDDAARGDARHAGAGAAPDDPRGAARRDPPPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP038227.1|WP_004188221.1|364300_364756_-|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP038227.1|WP_004529183.1|364745_366332_-|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDARDEGAGRVVAVRGAVIDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAAASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP038227.1|WP_004524981.1|366303_366561_+|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP038227.1|WP_004188840.1|366692_368486_+|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASITLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP038227.1|WP_050020039.1|368469_369900_+|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MCSRNKECRVDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP038227.1|WP_004529184.1|369896_371075_+|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA

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Crispr_ID: NZ_CP038227_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038227_2

702702-702826

Orphan

Consensus_repeat	Method
CCGACGAGCCGTGCGCGGCGGCGCGCGCCGGCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP038227_2

>merge|NZ_CP038227|2|702702-702826|CRISPRCasFinder
CCGACGAGCCGTGCGCGGCGGCGCGCGCCGGCGTTGCGCCTCGCGATCGAAGCGCTCGGCCCGTTCGCAACCCTATCCGAACCGCTTCGCCCGACGAGCCGTGCGCGGCGGCGCGCCCGGCGTTC

>NZ_CP038227|2|2|702702-702826|CRISPRCasFinder
CCGACGAGCCGTGCGCGGCGGCGCGCGCCGGCGTT	GCGCCTCGCGATCGAAGCGCTCGGCCCGTTCGCAACCCTATCCGAACCGCTTCGC
CCGACGAGCCGTGCGCGGCGGCGCGCCCGGCGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038227.1\|WP_004541992.1\|699990_700749_+\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP038227.1\|WP_004523343.1\|694661_696788_-\|catalase-HPII	unknown	unknown	gnl\|CDD\|236886
NZ_CP038227.1\|WP_011205749.1\|707199_707556_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004553957.1\|697565_697754_-\|DUF3008-family-protein	unknown	unknown	gnl\|CDD\|314387
NZ_CP038227.1\|WP_004532620.1\|697359_697521_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP038227.1\|WP_004546366.1\|708805_709252_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004542031.1\|703759_704104_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004523336.1\|706866_707163_-\|lipoprotein	unknown	unknown	unknown
NZ_CP038227.1\|WP_009950769.1\|705584_706442_-\|MipA/OmpV-family-protein	unknown	unknown	gnl\|CDD\|377682
NZ_CP038227.1\|WP_004541957.1\|700807_701704_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP038227.1\|WP_004529442.1\|709657_709915_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_150977076.1\|692947_694054_-\|Ku-protein	unknown	unknown	gnl\|CDD\|274290
NZ_CP038227.1\|WP_004552246.1\|696923_697310_-\|DUF3022-domain-containing-protein	unknown	unknown	gnl\|CDD\|378603
NZ_CP038227.1\|WP_004523334.1\|707861_708131_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004552250.1\|702002_702512_-\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377580
NZ_CP038227.1\|WP_004523344.1\|694135_694639_-\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_CP038227.1\|WP_004529441.1\|709353_709653_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004553960.1\|704554_704905_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004523340.1\|697821_699297_-\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|237109
NZ_CP038227.1\|WP_004552252.1\|702976_703534_-\|DUF3005-domain-containing-protein	unknown	unknown	gnl\|CDD\|378664

Protein	Function_ID	Function_description	E-value
NZ_CP038227.1\|WP_004541992.1\|699990_700749_+\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	3.42152e-26
NZ_CP038227.1\|WP_004523343.1\|694661_696788_-\|catalase-HPII	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP038227.1\|WP_004553957.1\|697565_697754_-\|DUF3008-family-protein	gnl\|CDD\|314387	pfam11450, DUF3008, Protein of unknwon function (DUF3008). This is a bacterial family of uncharacterized proteins.	3.32311e-13
NZ_CP038227.1\|WP_004532620.1\|697359_697521_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.000851951
NZ_CP038227.1\|WP_009950769.1\|705584_706442_-\|MipA/OmpV-family-protein	gnl\|CDD\|377682	pfam06629, MipA, MltA-interacting protein MipA. This family consists of several bacterial MltA-interacting protein (MipA) like sequences. As well as interacting with the membrane-bound lytic transglycosylase MltA, MipA is known to bind to PBP1B, a bifunctional murein transglycosylase/transpeptidase. MipA is considered to be a structural protein mediating the assembly of MltA to PBP1B into a complex.	9.17397e-51
NZ_CP038227.1\|WP_004541957.1\|700807_701704_+\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	1.03503e-108
NZ_CP038227.1\|WP_150977076.1\|692947_694054_-\|Ku-protein	gnl\|CDD\|274290	TIGR02772, conserved_hypothetical_protein, Ku protein, prokaryotic. Members of this protein family are Ku proteins of non-homologous end joining (NHEJ) DNA repair in bacteria and in at least one member of the archaea (Archaeoglobus fulgidus). Most members are encoded by a gene adjacent to the gene for the DNA ligase that completes the repair. The NHEJ system is broadly but rather sparsely distributed, being present in about one fifth of the first 250 completed prokarytotic genomes. A few species (e.g. Archaeoglobus fulgidus and Bradyrhizobium japonicum) have multiple copies that appear to represent recent paralogous family expansion. [DNA metabolism, DNA replication, recombination, and repair].	6.7973e-123
NZ_CP038227.1\|WP_004552246.1\|696923_697310_-\|DUF3022-domain-containing-protein	gnl\|CDD\|378603	pfam11226, DUF3022, Protein of unknown function (DUF3022). This family of proteins with unknown function appears to be restricted to Proteobacteria.	2.2106e-34
NZ_CP038227.1\|WP_004552250.1\|702002_702512_-\|ferritin-like-domain-containing-protein	gnl\|CDD\|377580	pfam05974, DUF892, Domain of unknown function (DUF892). This family consists of several hypothetical bacterial proteins of unknown function.	2.44459e-48
NZ_CP038227.1\|WP_004523344.1\|694135_694639_-\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	3.63901e-31
NZ_CP038227.1\|WP_004523340.1\|697821_699297_-\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|237109	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional.	0
NZ_CP038227.1\|WP_004552252.1\|702976_703534_-\|DUF3005-domain-containing-protein	gnl\|CDD\|378664	pfam11448, DUF3005, Protein of unknown function (DUF3005). This is a bacterial family of uncharacterized proteins.	1.05611e-52

>NZ_CP038227.1|WP_004552250.1|702002_702512_-|ferritin-like-domain-containing-protein
MTTPQEHLEDWLRDAYAMERHAETMLKAQAARLDNYPVLRDRIQQHVEETLEQQRLLESCLQRLDTSPSAIKDLAARAAAYGQAASGLFVADEVVKGAMAGYVFEHVEIASYKTLIAAAQLAGENEIRDCCERILKQEVDMAEWMSQHLPDIAVAFLERSAAERRDAKR
>NZ_CP038227.1|WP_004541957.1|700807_701704_+|manganese-catalase-family-protein
MFFHNKRLQYTVRVAETNPGLANLLLEQFGGPQGELAAAMRYFTQAIAEEDAGRKDMLYDIATEELSHLEIIGSIVAMLNRGAKGELAEAVDEQAQLYRKLNGGGNDSHVTQLLYGAGAPLVNSGAVPWTAAYVDTIGEPTADLRSNIAAEARAKIIYERLINVTDDPGIRDALGFLMTREVSHQKSFEKALYSITPNFPPGKLPAVPEYADLYYAMSDGGGARRKSPWNDGHDLRLVEHPPVPADGGDGKATIALDGDESTTLEAMRHRLKSDPSSDPTTGADLGSGGPDKPRDFPT
>NZ_CP038227.1|WP_004541992.1|699990_700749_+|DUF4397-domain-containing-protein
MKPIRTVAALISAVALVAACGGDDTGTELGISNPQARFINAVPAGPSLDYYLNAQANATGIAYKGVTRYRSVGSGSQTASYDVTGTSVTIASQTFNAANGHHYTTIAIPSTSTPISVIDDPFAKGLLSDQARVRGFNASPNAQNVDIYVVPPGTNIAAQSPTLAGAAYQNAVPASGQDSIYLSGGTYQVIVTLPGSKTPILTTPPVSIANNADWLLLTIPAGGVADVVPNDIHVLVAQGNDADTSAQELGPQ
>NZ_CP038227.1|WP_004523340.1|697821_699297_-|RNA-polymerase-factor-sigma-54
MSATLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQSPDDDAAEAAPKPGETPAADANARADDGYAERDEGPFATDASPPAGQDVPLTAELSARGSSRRSDDASDLEPGDWMTAEPTLHEHLHDALRLCQLTRRDRTLARMIIDALDDDGYLRQALPELAAAADPLLHPAEQELLVALRLVQSLDQPGIGARTLSECLLLQLDAMPADTPGVECAKEIAAHHLERLARRETAEMQRRIGCDTHTLRIACALVRRLDPRPGNQYGSTAGNYVVPDVIVRQVRNDWLVTINPAVMPRARIHRRYAELFAQSSGSNQSPLGQQLQEARWLIRNAQKRFDTIRRVGECIVERQRDFFRYGEIALKPLVLRDIADELGLHESTISRATGNKYMSTPHGTFEFKHFFPRKLEAAGKGACSAAVARVLIRDMIAAEQAIDPLSDVALAQRLAGRGIVLARRTVTKYRQAMKIPPAELRRRAPL
>NZ_CP038227.1|WP_004553957.1|697565_697754_-|DUF3008-family-protein
MPAKSQAQQRAAGAALSAKRGRTKASELKRPSKSMYSSMSEKELEKLAGTKTKDKPKHKSKS
>NZ_CP038227.1|WP_004532620.1|697359_697521_-|DUF1328-domain-containing-protein
MLRYALIFFIIAIVAAVLGFGGIAAGAAEIAKILFYIFVVIFLVTLVLGVARR
>NZ_CP038227.1|WP_004552246.1|696923_697310_-|DUF3022-domain-containing-protein
MTLPTDLPQRLVEIEHLLSDCFASPSTTVLHVDDSSGRLTIQVSWVAARAASSLLEARCALNLVFEPNVLRRYGRLDAAARARVRERLAALARQTVDAARPVEGGEADACNATLPVTDALLDDALRGG
>NZ_CP038227.1|WP_004523343.1|694661_696788_-|catalase-HPII
MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLVGNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFRFVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTKLIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCPFANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPETVEGAKVRVRSGSFADHFSQAALFYQSMSDVERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPASAPAIVAQPLSPALSLLTRGKRSVRSRKVALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQEAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA
>NZ_CP038227.1|WP_004523344.1|694135_694639_-|DUF421-domain-containing-protein
MDAVLAFFAPLFGSGAPLGAPQMAARAAAAFFIALALIRIAGRRSFGQRSPFDYVVGILLGATLSRAIVGVSPFWPTVAASLAIVLLHRALAWACVRSARLERFFVGAQRELYRNGRFDEAQMSAALITMTDIYESVRQKTGECDLSGVAAAILERNGHVSIIRRKS
>NZ_CP038227.1|WP_150977076.1|692947_694054_-|Ku-protein
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRNDILALVDRKVREGRVEEIAQEDTAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGEGGEGGGRGGGELARELERSVGGTHGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA
>NZ_CP038227.1|WP_004552252.1|702976_703534_-|DUF3005-domain-containing-protein
MQNAESNPTPQKQREIAAKSPVKTPAAGRDMPDAATQEQETRAHERKLTAEAIAGKTPTGLPPIDVDQYASGDGDPVRRAASRIVTLDNANMAATDNTVDVDGKGLEARTGASEWHDNVIYSNASLDEAVDTPDDSLAGIESRPHGYRPEVEPSEGWRVVYLGTVDIEHTLGARTEHKFSFERST
>NZ_CP038227.1|WP_004542031.1|703759_704104_-|hypothetical-protein
MKKYLAIMAAVAIVLGGCATKNYGRMGNLTDYERNTMDCREINLEIARVDGFLSHVDEESEFDGRSVLSFLGDFGIGNVLEKDAAKKSARDRRQALDALRAAKQCGYATTGAPL
>NZ_CP038227.1|WP_004553960.1|704554_704905_+|hypothetical-protein
MHIKSAATFVSLVLFLHGCTSIDIDQLASHQHDQDENRCRNYGYQIGTNKFADCMMLLDQERRSAAIAEDENDERLKSLSIMRNNDERFPVCVPTMPNVKLDVPNHSWYGPNCRER
>NZ_CP038227.1|WP_009950769.1|705584_706442_-|MipA/OmpV-family-protein
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISVGAAATLQPRYDGSNQYRPMAGPTFDARYRDLWFMSTGEGIGVNVLRGPNWRATLSAGYDLGRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLRADVRRSVGGANGWVADLAAYMPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTLVWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF
>NZ_CP038227.1|WP_004523336.1|706866_707163_-|lipoprotein
MTIRRISTKLAGVAAMALTAACSQNGPYGGSPRAGSTGGTITDGVNQPPAAVTPSDGARYGSPGYHGAQPMAPGGDVGDGNGAGTGSMPAPGAPGSSD
>NZ_CP038227.1|WP_011205749.1|707199_707556_-|hypothetical-protein
MAGAARDAPPPLEKAMTIRIEPGDKREIAETLGRYFEARSIPFHIEEHPADVLHIGFHADGHPAAVTVTFDEDAFAAFAQWDIEQKRLALRRLADEFAEMMAQRSPTAHAGDLHINRF
>NZ_CP038227.1|WP_004523334.1|707861_708131_-|hypothetical-protein
MHPDVLFHRPYPPIPDPEYVPPDPDEDDDNPVDPPEPYRHPEGDPPPPEPPVHARLAPRGRRGGRLTAAACVCRRTLAHLRGDGRVHCE
>NZ_CP038227.1|WP_004546366.1|708805_709252_-|hypothetical-protein
MTDGPARCEASTRCDSAWRDAMRAAEARSQSTARRGLRAARRAATDGVWRAGASAGAGMSVGASVTLRAGGREHRVPRARRVTGAARGVARACAGGDVAAAARLAAGCFAACGGRPAGRRRFASSHAWIAGGARRSDCFARVFRACGR
>NZ_CP038227.1|WP_004529441.1|709353_709653_-|hypothetical-protein
METPKSTVHYESNVCGGSFESVLDRFGNWKREPLVYRPERRMFEGKDSVRRLGDEAFDSPDKARRALIRSCAPRDRFALAAPICDDDHQMWLVMAAFEA
>NZ_CP038227.1|WP_004529442.1|709657_709915_-|hypothetical-protein
MRKARSRRARGYASCRVAHCAACRGRAVRRRARRARRPTAGGAGVEAAAQPARPARRAQSNLFRMPRVAADAFVRAMRGGRTTGR

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Crispr_ID: NZ_CP038227_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038227_3

774314-774459

Orphan

Consensus_repeat	Method
GCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCGAAG	PILER-CR
CGGAATGCCCGATCATCGGGATGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP038227_3

>merge|NZ_CP038227|3|774314-774459|PILER-CR,CRISPRCasFinder
TCGTCGGGATGCTCGATTGCCGCAGTCACCCTCCGCCGGGGCTCCGTCGTCGGAATGCCCGATCATCGGGATGCCTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGCCGGAATACCCGATCATCGGGATGCTCGATCGCCG

>NZ_CP038227|3|1|774314-774459|PILER-CR
TCGTCGGGATGCTCGATTGCCGCAGTCACCCTCCGCCGGGGCTCCGTCGTCGGAA	TGCCCGAT
CATCGGGATGCCTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGCCGGAAT	ACCCGATCA
TCGGGATGCTCGATCGCCG

>NZ_CP038227|3|3|774364-774449|CRISPRCasFinder
CGGAATGCCCGATCATCGGGATGC	CTGCTCGCCGAAGCACTCCACCGCAGAGGCGCCGCCGC
CGGAATACCCGATCATCGGGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038227.1\|WP_038757807.1\|775035_776301_+\|polyhydroxyalkanoate-depolymerase	unknown	unknown	gnl\|CDD\|130908
NZ_CP038227.1\|WP_004187137.1\|784088_784538_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341411
NZ_CP038227.1\|WP_004205322.1\|766975_767911_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176109
NZ_CP038227.1\|WP_004532595.1\|778420_780232_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	unknown	unknown	gnl\|CDD\|225098
NZ_CP038227.1\|WP_004187469.1\|773182_773578_-\|conjugal-transfer-protein-TraR	unknown	unknown	gnl\|CDD\|224648
NZ_CP038227.1\|WP_011205760.1\|768091_768523_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_009927403.1\|766738_766849_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004552279.1\|776561_778346_+\|ribonucleotide-reductase	unknown	unknown	gnl\|CDD\|180772
NZ_CP038227.1\|WP_079996140.1\|783690_784116_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_150977070.1\|770776_773050_-\|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|369639
NZ_CP038227.1\|WP_004545414.1\|780228_780651_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237171
NZ_CP038227.1\|WP_076839131.1\|768822_770481_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP038227.1\|WP_004532539.1\|768606_768810_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004523279.1\|780748_781780_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236122
NZ_CP038227.1\|WP_150977068.1\|776402_776585_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004200700.1\|765562_766678_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378454
NZ_CP038227.1\|WP_004196908.1\|774805_774991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_076804966.1\|763770_764061_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_150977066.1\|781776_783624_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223732
NZ_CP038227.1\|WP_004196898.1\|764820_765261_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863

Protein	Function_ID	Function_description	E-value
NZ_CP038227.1\|WP_004187137.1\|784088_784538_-\|CBS-domain-containing-protein	gnl\|CDD\|341411	cd17775, CBS_pair_bact_arch, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and archaea. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.39507e-50
NZ_CP038227.1\|WP_004205322.1\|766975_767911_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176109	cd08417, PBP2_Nitroaromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that involved in the catabolism of nitroaromatic/naphthalene compounds and that of related regulators; contains the type 2 periplasmic binding fold. This CD includes the C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of dinitrotoluene and similar compounds, such as DntR, NahR, and LinR. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. Also included are related LysR-type regulators clustered together in phylogenetic trees, including NodD, ToxR, LeuO, SyrM, TdcA, and PnbR. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.67997e-62
NZ_CP038227.1\|WP_004532595.1\|778420_780232_+\|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein	gnl\|CDD\|225098	COG2187, COG2187, Uncharacterized protein conserved in bacteria [Function unknown].	3.75845e-75
NZ_CP038227.1\|WP_150977066.1\|781776_783624_+\|STAS-domain-containing-protein	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	1.00372e-106
NZ_CP038227.1\|WP_004552279.1\|776561_778346_+\|ribonucleotide-reductase	gnl\|CDD\|180772	PRK06948, PRK06948, ribonucleotide reductase-like protein; Provisional.	0
NZ_CP038227.1\|WP_150977070.1\|770776_773050_-\|pyridine-nucleotide-disulfide-oxidoreductase	gnl\|CDD\|369639	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase. This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.	1.06435e-56
NZ_CP038227.1\|WP_004545414.1\|780228_780651_+\|hypothetical-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0.0014443
NZ_CP038227.1\|WP_076839131.1\|768822_770481_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	9.5934e-37
NZ_CP038227.1\|WP_004196898.1\|764820_765261_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	3.1145e-25
NZ_CP038227.1\|WP_004523279.1\|780748_781780_+\|hypothetical-protein	gnl\|CDD\|236122	PRK07877, PRK07877, Rv1355c family protein.	3.7258e-30
NZ_CP038227.1\|WP_038757807.1\|775035_776301_+\|polyhydroxyalkanoate-depolymerase	gnl\|CDD\|130908	TIGR01849, unnamed_protein_product, polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some [Fatty acid and phospholipid metabolism, Degradation].	1.60535e-112
NZ_CP038227.1\|WP_004187469.1\|773182_773578_-\|conjugal-transfer-protein-TraR	gnl\|CDD\|224648	COG1734, DksA, DnaK suppressor protein [Signal transduction mechanisms].	1.7869e-14
NZ_CP038227.1\|WP_004200700.1\|765562_766678_-\|hypothetical-protein	gnl\|CDD\|378454	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport. This family contains polyketide cylcases/dehydrases which are enzymes involved in polyketide synthesis. It also includes other proteins of the START superfamily.	2.16274e-11

>NZ_CP038227.1|WP_004187469.1|773182_773578_-|conjugal-transfer-protein-TraR
MAAFDEHQLQVLGALLRACRQALQADVRAGERQRADEPYANLAGPAPDEGDEANADLFVDVDHALLGMKLAELRDVDAALQRIARRDYGCCADCGQPIAYERLLARPTALRCAPCQRAHERRFATQPRPSL
>NZ_CP038227.1|WP_150977070.1|770776_773050_-|pyridine-nucleotide-disulfide-oxidoreductase
MREFDYLLVGGGIASVTAARTLRGEDASASIAILCGESVLPYQRPPLSQEWLMGAVQPASITLHDAAFYAAQRIDIALGVRAEQLDRAKRIVRTSSGATFRYGKLLIATGASAKAPALPGFGLDGVHVLHTFAQAQALKDAAAHARRATVLGGGFLGVEIAATLQALGLQVTLVERAPGVMPSLRAPALGGHFEALCRARGIDVLTRCEVRRVLGAQCVEAVETSDGGTRPCDLFVAAVGVTPNCGWLDGSGLALGDGVEVDAFLQTADPDVFAAGDVAHFDDPIFGVRRRIEHWDNAVRQGRIAARNMLGHRLPYRDVSIFYGSVFGLSYNLLGYPVGATETIERGAFDEASYMQLYLADDVLRAAFTIDRPAVEIAALNDAIRLHVNVAARKTKLSDPNYPLDKLPVQTILILQGGGALGAFECGAVKALEQHGVRPDVISAVSIGAFNGAIVASHPKGATKALEAFWRELSIALPLPYESQWREAWLSSYVLSFGVPNFLKPQWSQLGFDADRLRAKWTSFFDATAIEQLIARYVDFDSLGMSPTRLLIGAVDVETGEPRIFDSYVDRLSPAHVLASGSLPPGMPWTVVDGRPYWDGGVVSNSPLDLVIARCGQIGGRVFIVDLFSGSKALPTNLVEVMLRREEIAYMDRVRNDLRFEEYASDFRDLVDGILAHVDAPSANEIRQQPLYIRLMGNRAAIDIARITLNREGRLSFIEDYDFSSDAIAQLQQQGYDAALVALANGRSRRRRGRRRA
>NZ_CP038227.1|WP_076839131.1|768822_770481_+|GMC-family-oxidoreductase
MKQQSYDYDYVVVGSGFGGSVSALRLSEKGYRVLVIEQGRRWTPENLPESTWNLSRWQWRPALGLHGFFSMRFFRHVVVLHGNAVGGGSITYANTLLVPPDKVWREGTWAGLEDWERVMPAHYATAKRMLGVVTNRRMDAADFRLKDMAKLIGVEKSFYPTEVGVFFGDDADAPGTRYADPYFGGAGPERTSCIGCGGCMVGCRHGAKNTLDRNYLYLAERLGAQVREQTKVVDVRPLDARADGAAGYAVEAVSLAAGARGAKSRLTCRGVVFAASSLGTQDLLMRLKEKGSLPRLSDALGKRVRTNAESLIGVRFPKSRVDLSKGVAIGSGIYIDEHTHIEATRYPSGSDTMGLLTTVLTRGAPGGLRVLVWLGALAKLVLTRPLSAWRMIDPRGFARETMIFLCMQTLEGHLTMRLKRRWFWPFSKQLATSGAKIPAYIPAANDFAQKAARALGGVPMTSLTEILLNVPMTAHCMGGAAMARDARDGVCDGRSRVFGYRNMYVCDGSVLGANLGVNPSLTITALAEHAMSHVPAAREQRWDSTAETPVAA
>NZ_CP038227.1|WP_004532539.1|768606_768810_-|hypothetical-protein
MIVRTGPRARRCTNGSSPCFPAGRRCAMRRTACAAWSRAFPRLFAHPARDGARRARRRDPRPLTRTP
>NZ_CP038227.1|WP_011205760.1|768091_768523_+|hypothetical-protein
MHQERRKRNADRHGTHPYDADSRAAPREAPRFEHEPKKQRDAAQHEVDRDRAAREIRERIEHKARPDVRRAERPISQDVAQTPIGAAGAISPSTAHSIFLEIGLALAGRPIQVRRNRAPFTHGTPRRRPARGPTARTASPAPV
>NZ_CP038227.1|WP_004205322.1|766975_767911_+|LysR-family-transcriptional-regulator
MIQNLRQLDLNLLLVFDALMQEQNLSRAAIRLHMSQPAVSNALTRLRQQLGEPLFTRTARGMTPTAQARTLYEPVRQALYLLQIGLGPQADFEPDTHHLFKLSMNDYGQTVLLPDLLAHIKSRAPNVMLSVQSDDAGSIPAQLTTGTLDLAIDYLHFDNPELCYEPLHEEHLVVIGRAGHPAFAGGLALRGYEESGHVSIQPRDRRGSPLEIVLGSARVRRVVHLQVPHYLTIPALVAKSDLLGTIPRRLAERFADVYALQIAPLPIDIAPIQVSLIWHRQQDAQPGLRWLREQVVLTHRAIIGCGEHAPA
>NZ_CP038227.1|WP_009927403.1|766738_766849_-|hypothetical-protein
MQSTGSFDISARRMIEFRSVNKSNHDCPLEKSSGLL
>NZ_CP038227.1|WP_004200700.1|765562_766678_-|hypothetical-protein
MTQDVTVFRARYRASVHPRYNAWLHGGFVLAYGCAAIAFFLKDVARVSAVQWASVPAAFLLFNWLEFTVHRHVGHVKRRFGAMFYRRHTGDHHSFFANEQIAYREARDWRVILFPAWLIVVFSLGLFALHAVLGRFDANVAGLFASTMLGGYLLYECVHACEHLPDAHPLAKWPWIRQMRVLHRVHHRDALMRSCNFDVIWPLMDWLHGTLRWSEAPGADMSTRMRHEIDIACAGADVLAYASDASRWPEWHPSSLRVDGPAGSLAAGSRFDEDVRAAGRVDRLHWDVVRNEPGVMWQARAANTAGSLRILLTYECSGGPRGARFVRTLHYHSPNPLLRLANALVMRGRVERESAYSLTLLKRRLEAARDA
>NZ_CP038227.1|WP_004196898.1|764820_765261_+|SRPBCC-family-protein
MKQQRIEIAEEFDAPVHQVFRFFSEHENLKSIFSPAKIRRISDGEPARNGVGSAREMRVPGAPPFVETVTAYQENELIEYRITRGSPLRDHLGVMRFVPIDERRTYFHYVITFEGKVPFVAPVVRHVLEGSIRRGLGKVATRRLWG
>NZ_CP038227.1|WP_076804966.1|763770_764061_+|hypothetical-protein
MRHACRACGPRVRRTRFCAMRKRGETHGRPLSLSLAHRATDARRARCPHSRHELCTRARAPARERRRCIASRISLITTINFRAVAFRPRLPKHYID
>NZ_CP038227.1|WP_004196908.1|774805_774991_-|hypothetical-protein
MAHAACAARAAVGGPLARGRRPSSVSGTETPAVAKRGSDGGGRAFAATQRIVSDAHRIGTA
>NZ_CP038227.1|WP_038757807.1|775035_776301_+|polyhydroxyalkanoate-depolymerase
MLYAWLEAQREFFRACQPWAGAAQRAGAGARPAGWPTWGPMARAADAVPAPPPFAIASIEIDGAAVPVDECVVDDTPFCALRKFSRRLRGDAAARPAVFLCTPLAGHHAVMLRETVETILATRDVYVTDWRNARDVPPEAGAFGLDDYVCTLERFVAGAAGDGLHMMAVCQATVPALAAVALLAARDVHVTSVALLGGPVDTRSHPTLIDRFALEHDLDWFRRTAIDIVPPPYAGAGRRVYPGFIQHAAIIVAHPQRRASLESRYWAAWMTGDFAAAARCLREMNEYGAVLDMTERYFLDTIRVIFHERLLAQGRWSIGRRLVAPQRLTRTALCTIEGGRDDIAGAGQTHAAHALCDAVPDAVRERITEPDCDHYDLFLGPRWRRTIHPALDAFWTRAEAARAAAGEPRPTAERAERRIAH
>NZ_CP038227.1|WP_150977068.1|776402_776585_-|hypothetical-protein
MVVHVADHADERIGVGNGARAFVDRPQAACASRAVRRAARGAVRGAVRRAARQATWRVVR
>NZ_CP038227.1|WP_004552279.1|776561_778346_+|ribonucleotide-reductase
MIGDMDDQPICDAVFADRYALPGEHSRAQACARVARALALAEPMATRSGAARRFYRNLLNGAFGAGRIMARAGAAPDQTMASCFVHPIRAPAALTRFHPNLDEALDEARLALAMGADIGYDFSAIPPAGARPDADHPDSPGVCAALDRFDRIGTQAGERDGRRRAQLAVLRCDHPDLLAFAAAKHRHAGRHARWTTLELAVAATDAFMQAVEQDLPWTLRHTAPPRDAPGGALPGADGAWTYASVPARHVWREIVSAARDGAGPGLVFVDAIDAADPLRGRERIGATSPCGAQPLPPYGSAMLGAIDLSRFVRNPFGAGGEPRFDFAAFDTAVRIEVRLLDNALDVTRWPLAAHARESYQKRRIGVGVTGLADMLAMMRLRYDSPAAREMARYIASDLRHHAYAASAELAAERGAYPLCDRHAHLDALRAGPPLPHAVCHAIERDGLRHSHLTSFAPVIGVSLAFGDHCSPGIEPARAWIEHRPVRAGAAGAPGMRAENHAHRLFRSLRGERAALPDYFATDADVAPGERLAMRVALQPYVDAGIDNTLTLANHYSLEEVNALLFAAWRAKLKSVAIRRADLARDAQPSDDDGV
>NZ_CP038227.1|WP_004532595.1|778420_780232_+|bifunctional-aminoglycoside-phosphotransferase/ATP-binding-protein
MTTGAVAARRLPRRGTARGRRAPSRAFTIHGGDEMRRSRPPKPAKPAAVRRRPHGAARAHAIRGNGPQRRAVRERAARRLSRDIDAALRRASTYPHPAGPIVRIETHLSVVYLVGRFAYKRLKPFDFGFANFSELAARRRACEAELALNRPLAAPIYLAAGPLVRRARGLRLFGAGAAVDHVVRMRRFDERMLFSRLLARGALDAADIDAAATRLAAYHLHAPRDIPRRAYGSARELRRQLDDMLAPLERALGAALPASLRAWCVRRCDELAAHLDARRADGYVRACHGDLHLNNVVKRGRDALMFDCIDFDDALRWIDVINDLSFLLMDLHAHDRAALAHRLLNRWLDETGDFAGLAALPLYVAYRALVRALVATMRAGGDAAARAARIERARRYVDVAAHAARARRPCLLLCHGYSGSGKSVASRALADVSGAIRLSSDSERKRARPFAAVDARPLPASAYTPQQIDAQYERLRALARDVLRAGYTALVDATFLSHARRARFFALARELGVPVYVLDFHASRACLERRVDARAAARDDHSDAGAAVLATQRASADPLDADERARTIGFDTDVPLATLRSAGYWRPVLDALDAARVDAQATR
>NZ_CP038227.1|WP_004545414.1|780228_780651_+|hypothetical-protein
MKRRAAPCATVAATHRGNEARAARAAGRSRADASRHRFAHSLSATPCRTAPHRNGNGNGDGNDDRTPPPAGSARAARRADSRANRTRSRAHARRAGEIRRSRGPRRHGRRPRERRPNARSTHRPSAVDLGQSAPAGRSID
>NZ_CP038227.1|WP_004523279.1|780748_781780_+|hypothetical-protein
METSPLKTTTPEAIPPFDPSASVEDKLRLAIHYAILAPSSHNTQPWRFMVGDGSVMLCADRLRALSVVDPYDRELLISCGAALLNLRVALSRFGFAYVIDMFPSPSDPDVIALVRLDPHGYHDESLVPLFDAILERVTTRTPYANEAVPCDVQRALVDAGAAEGAEIACVDAPHALDEIAELIADADRLQFADPRFRRELANWVHPRRHDDGMPAFAAGVPALLDFATPVVASAIRTFDLGGGLAAMHHKLVDGSPLIVGISTASDDRDAWVAAGQALERVLLVAAAAGLTASYLNQPIEIDALRERLRPLLHVDAHPQLLLRIGRGPVVAHAPRRPLMDVVS
>NZ_CP038227.1|WP_150977066.1|781776_783624_+|STAS-domain-containing-protein
MTERERAARGRNDARRGGGDSGGDDEAWRRWLPGIATLRTYRRAWLARDLYAGVALTAVLVPVGMSYAQAAGLPVIAGLNASIAALVGYAIFGPSRILVLGPDSALAALIAGAIAPLAHGEPAHAVALAAALALMSGGFCVLAGLLKLGFVTDLLSKPIQYGYLNGLALTLIASQLPSLLGTVPLGGTFVDQVASLAATVAQGRIDFASLALGGGCLAGIALLRRVAPAWPGMLIAVAGASIVAAWLGAAPDAGGAHAHVAYAHVANAHVANAHVALVGSLAGTLPPLGLPSISLADASRLIAGALAIAMVSVADISVLSHVFAQHDGSETDRNQELCALGAANLLAGMLRGCAVSSSASRTPVALAAGARTQLTSLVAAACIALLLVAPTLLARVPLAALAAVVVYSANALVDVRAIVRLYRVRRGECAVSVLCFAGVVLLGVVPGILLAVGLSLLSFVWRAWHPYDAVLGRVEGMHGYHDVSRHPGATLTRGLVAFRWDAPLFHANATIFRDHVRDAIAEAGAPVRCVVIAAEPITDVDVTAADMLATLRDELAARRIALVFAEMKGPVKDRLRTYGLFEKIGADHFFPTVTDAIEHFTRMRKDVATARRARR
>NZ_CP038227.1|WP_079996140.1|783690_784116_+|hypothetical-protein
MAQPLACSASKPRAVCAPIRLGGSARLRSVDDDGAGAQAIEAVRRRHESGHHDAVPVNAAQAARLRAVARTPNCALDRLDAARFAALRIDDVDISVAVALGIDINVAFPLDIDIDATRRETRRDETRRDDSIRQSRAFSSK
>NZ_CP038227.1|WP_004187137.1|784088_784538_-|CBS-domain-containing-protein
MNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSLIAKEVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVDDLLASVAALFDEIASISRRQIHFEEKARD

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Crispr_ID: NZ_CP038227_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP038227_4

2322338-2322502

Orphan

Consensus_repeat	Method
GCGAGCGCGGCGAGCGCGGCCGCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP038227_4

>merge|NZ_CP038227|4|2322338-2322502|PILER-CR
GCGAGCGCGGCGAGCGCGGCGGACAGGCCGCTCGCGACATAGCTCGACGCGACGTAGCGGCGCGCGTCGACGCCCGCGGCGAGCGCGGCCGCGCGATGGGCGCCGAGCGCGTGCAGCGCGAGCCCGTAACGGGTGCGATGGGCGAGCGCGGCGAGCACGGCCGCG

>NZ_CP038227|4|2|2322338-2322502|PILER-CR
GCGAGCGCGGCGAGCGCGGCGGAC	AGGCCGCTCGCGACATAGCTCGACGCGACGTAGCGGCGCGCGTCGACGCCCGCG
GCGAGCGCGGCCGCGCGATGGGCG	CCGAGCGCGTGCAGCGCGAGCCCGTAACGGGTGCGATGGGCGAGCGCG
GCGAGCACGGCCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP038227.1\|WP_150977219.1\|2329570_2331046_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP038227.1\|WP_150977223.1\|2323136_2324942_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP038227.1\|WP_150977227.1\|2316598_2317087_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171561
NZ_CP038227.1\|WP_009927776.1\|2314899_2315160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_052113866.1\|2324938_2325988_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP038227.1\|WP_011205512.1\|2326619_2327360_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP038227.1\|WP_004524124.1\|2328107_2329367_-\|monooxygenase	unknown	unknown	gnl\|CDD\|173852
NZ_CP038227.1\|WP_004554968.1\|2327693_2327945_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_009927781.1\|2310918_2311209_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_009933985.1\|2325986_2326280_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_004542791.1\|2327332_2327539_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_150977337.1\|2318397_2320863_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP038227.1\|WP_004524117.1\|2317083_2318088_+\|FecR-family-protein	unknown	unknown	gnl\|CDD\|236622
NZ_CP038227.1\|WP_150977221.1\|2326296_2326527_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP038227.1\|WP_150977229.1\|2311716_2313333_+\|phage-terminase-large-subunit	unknown	unknown	gnl\|CDD\|130691
NZ_CP038227.1\|WP_038755846.1\|2311212_2311710_+\|DUF1804-family-protein	unknown	unknown	gnl\|CDD\|370140
NZ_CP038227.1\|WP_058040191.1\|2313322_2314855_+\|DUF935-family-protein	unknown	unknown	gnl\|CDD\|368731
NZ_CP038227.1\|WP_038791867.1\|2315160_2316393_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309383
NZ_CP038227.1\|WP_004548936.1\|2321081_2322062_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119321
NZ_CP038227.1\|WP_085955848.1\|2331461_2332621_+\|IS3-like-element-ISBps2-family-transposase	unknown	unknown	gnl\|CDD\|222853

Protein	Function_ID	Function_description	E-value
NZ_CP038227.1\|WP_150977223.1\|2323136_2324942_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	2.83548e-177
NZ_CP038227.1\|WP_150977227.1\|2316598_2317087_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171561	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional.	3.50146e-71
NZ_CP038227.1\|WP_052113866.1\|2324938_2325988_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	1.21187e-122
NZ_CP038227.1\|WP_011205512.1\|2326619_2327360_+\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	3.08543e-14
NZ_CP038227.1\|WP_004524124.1\|2328107_2329367_-\|monooxygenase	gnl\|CDD\|173852	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C. DszC is a flavin reductase dependent enzyme, which catalyzes the first two steps of DBT desulfurization in mesophilic bacteria. DszC converts DBT to DBT-sulfoxide, which is then converted to DBT-sulfone. Bacteria with this enzyme are candidates for the removal of organic sulfur compounds from fossil fuels, which pollute the environment. An equivalent enzyme tdsC, is found in thermophilic bacteria. This alignment also contains a closely related uncharacterized subgroup.	3.81867e-137
NZ_CP038227.1\|WP_150977219.1\|2329570_2331046_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.42305e-36
NZ_CP038227.1\|WP_150977337.1\|2318397_2320863_+\|TonB-dependent-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.33946e-85
NZ_CP038227.1\|WP_004524117.1\|2317083_2318088_+\|FecR-family-protein	gnl\|CDD\|236622	PRK09774, PRK09774, fec operon regulator FecR; Reviewed.	2.1512e-74
NZ_CP038227.1\|WP_150977229.1\|2311716_2313333_+\|phage-terminase-large-subunit	gnl\|CDD\|130691	TIGR01630, psiM2_ORF9, phage uncharacterized protein (putative large terminase), C-terminal domain. This model represents the C-terminal region of a set of phage proteins typically about 400-500 amino acids in length, although some members are considerably shorter. An article on Methanobacterium phage Psi-M2 ( calls the member from that phage, ORF9, a putative large terminase subunit, and ORF8 a candidate terminase small subunit. Most proteins in this family have an apparent P-loop nucleotide-binding sequence toward the N-terminus. [Mobile and extrachromosomal element functions, Prophage functions].	7.71762e-25
NZ_CP038227.1\|WP_038755846.1\|2311212_2311710_+\|DUF1804-family-protein	gnl\|CDD\|370140	pfam08822, DUF1804, Protein of unknown function (DUF1804). This family of bacterial protein is uncharacterized.	1.02235e-72
NZ_CP038227.1\|WP_058040191.1\|2313322_2314855_+\|DUF935-family-protein	gnl\|CDD\|368731	pfam06074, DUF935, Protein of unknown function (DUF935). This family consists of several bacterial proteins of unknown function as well as the Bacteriophage Mu gp29 protein.	1.96986e-64
NZ_CP038227.1\|WP_038791867.1\|2315160_2316393_+\|hypothetical-protein	gnl\|CDD\|309383	pfam04233, Phage_Mu_F, Phage Mu protein F like protein. Members of this family are found in double-stranded DNA bacteriophages, and in some bacteria. A member of this family is required for viral head morphogenesis in bacteriophage SPP1. This family is possibly a minor head protein. This family may be related to the family TT_ORF1 (pfam02956).	1.11105e-20
NZ_CP038227.1\|WP_004548936.1\|2321081_2322062_-\|ABC-transporter-permease	gnl\|CDD\|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	4.49135e-52
NZ_CP038227.1\|WP_085955848.1\|2331461_2332621_+\|IS3-like-element-ISBps2-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	3.27202e-70

>NZ_CP038227.1|WP_004548936.1|2321081_2322062_-|ABC-transporter-permease
MRDATDRLSRLAALGALAAVLAFFAVAAPGFATLANVERVLVNNFALLAIAALGMTLALSIGAIDLSLGTAIDVASLAFVCALAHRAGCASAALAGLGAALALGAANALLVTRLGIAPFLATLGTLFIGQTIQQLATDGGQPIYLLSTAPPPAFDALAHGVWLGVAAPLWIVAALAGALHVALERSTLGRQARALGAQPGVARHSGLRVGALAAGVFVASALVYGVAGLVLSSTVRSYAPQAGNAYLLNAIGATFIGATLSEARRPNVAGTLLGVLLVSFVANGLLLIGWNFYWQQVASGALVFAVLALGSGVGRERRARDAGQSG
>NZ_CP038227.1|WP_150977337.1|2318397_2320863_+|TonB-dependent-receptor
MHAPCMPQFAPQFAPRRVVARVAAAALFSACAAPGVSGAAEPAAATRGYDIPAGPLDAALTRFGREAGILLSFPGELTTGLRSPGLHGRADPAAALDRLLTGTGLVALRQPSGGYTLARLPAPAAAGADAALAADTTLPTVAVRASGPHADSYRPPREAAGLRSDAPLAEVPQAVAIVAQQVLRDQRPRNLDDALANVSGITQGNTLGSTQDTVMKRGFGDNRDGSVMRNGMPIVQGRSLNATTDSVEVLKGPASLLYGIMDPGGVINVVTKQPQLARRHAISALGSTYGGGRNGGELTFDSTGAIGESRVAYRLIVDQTNEQYWRNYGEHRETLVAPSLAWYGRDTQVVLSYEYRRFLMPFDRGTALDPRTNAPLAIPARRRLDEPFNDMRGESNLAQLAIDHQLAPDWKVHVGYSYNRETYDANQIRITAIDPLKGTLTRSNDATHGSRSTDSYGIAYVDGRVTLAGRRHDVQFGVDGEYRQVYRADMLRQPIKTPFSYLNPTYGLVPPSTSVSASDSDQSDTLHTASLFFQDSIHLSERWMLVGGARWVRYSQLAGRGRPFQVNTNLSGTKWLPRAGIVYKWNDALSLYGSYTQSLKPTSKIAPMAGGYVIDGSTAPEEGASWELGAKLDMPGGLAGTLAFFDIDKKHVLVSQYDDATNQTAWRTSGRARSRGIELDVSGRIGARWNVIASYAYIDAKTTEDPLYAGNRLWNVARHTASLAAVYDVGTVLGGDDLRIGAAGRYVGARPGDSANSFTLPAYATADAFATYDTRLGKQKLQFQLNVKNLFNRTYYPSSVNRFFVSVGDARQVSLLTTLQF
>NZ_CP038227.1|WP_004524117.1|2317083_2318088_+|FecR-family-protein
MSGAKPAGGPPAVPERVARRAVQWWVELGAAPASDATRARLARWRAEHPAHDAAWRHIEAVNGRLGHVASALSARAARAALLPPRSRGRRAALKALAVLLFAGGGAWTGQAYLPWRAWGADVRTALGERRTITLADGTTVVLNTDTAIDIRFDDATRGVRLLRGEIMVTSGRDAARAVPRALVIATAHGDVRPVGTRFSVRERGDATRVDVFDGAVRIAPRRAVGRAPLITAGHGADFTRDALAGPPRVLGASAGAWVDGILVASNLRLADLLAEIDRYRPGRVRCDAAVANLRVSGTYPLDDTDRILDTLRETLPVDVEYLSRYWVTVVAARD
>NZ_CP038227.1|WP_150977227.1|2316598_2317087_+|sigma-70-family-RNA-polymerase-sigma-factor
MQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEPRAFLTTVAQRVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGLPAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
>NZ_CP038227.1|WP_038791867.1|2315160_2316393_+|hypothetical-protein
MAVQPFGVKAENAIANLRGKVPVETERWNDMLGPMHATSFTVAGAPLDVVKDIHAALVRAQESGTTLTQFRKDFDAIVERSGWSYRGKRGWRTELIYRANMHSAYMAGRWQQIVANADRRPYLEYRAVLDNRTRPQHRAWNGTLLPVTAGFWRTHYPPCGWGCRCTTRSYSEAEMNAAGKQLSDEPNVRYRLVTNMDGEVTDRVPVGIDPGWDHNVGQSWLGPDMALGQKLASLPVDMQNNAIMNSVSLEYREAMAQRWRGWLGKPVTPLEPAVPAVVGFMEAELPVVIAQEFPTYATESLVVVAQAAADEAVTAAGDMAALASWPRPWLNRLPALLWDYKAVLVDTADTGATPLVILVPEGKIGGKVPVIRLRLDQVSNGSQSGAGIEVGMMDAADVSSARYRVVSGAL
>NZ_CP038227.1|WP_009927776.1|2314899_2315160_+|hypothetical-protein
MQTLTAEQQALHDQIVALSAALRAPINSPLQLAAHVMAFGASAQHAVDTGMSIPDDVLLALDDDLRRLALSGIMLVLVSTLQSEGA
>NZ_CP038227.1|WP_058040191.1|2313322_2314855_+|DUF935-family-protein
MALDIKRFVRSVRGVLGKQAAAADTDPHFFGRLHMLPNPDPVLRAMGVAETVYSSIMADAHVIGEVRSIRGEFRGMDYRVVTWAEEDAKAQLARDLCEQWMQRFRPNPTADWLEVMWQMLTAIFTGYRVHELVWDAWNGYLVPVSVIDRSNRRFGFDVDAQLMLKTRAEPMGAVIEEPYRFIVSRHMATMSNPYGSALLSGCFWPWTFKTGGWKYFVKFCERHGLPWPVARYGFGASEAEQEQLARAIEAMIDSGYAVVPEGSSVELLVANTSGSMLPQESLINAANREMSKCLTGQAMIAELQNVGARAATETAMKRQSDINDSDRDIASASMSQIFRWITTFNFGEDVPSPELEFFQINAAGKDRAETYQIAANMGARPSRKAMLEELNIPQAADDADALLPATSQPTTAEFAAADDTVLIESARAEDSRVRSAADAADAALEASVIEPIARMLEQAERDGRSLVDVQAELTKLVGEIDNTELIGIMRRALNWSFTQGYVDQEMNNGR
>NZ_CP038227.1|WP_150977229.1|2311716_2313333_+|phage-terminase-large-subunit
MAKKSNSAEQFLKELMAFTDDQRRLIEAACDGFSPDEEARLERRMRVFGGDYRFFFQTYFPHYSNATEPSVFHDWCFDNLPARIAAEQGKLINLSAPRGEAKSTLVTQVFTLLCIIRQSKHFIPIVMDSGDQAQMMLEAIKVELTDNPRLAMDFPEHVGPGRVWNVGVALTRTDIKLQAFGSGKRMRGIRHGPYRPDLVLLDDIENDENVQQKNQRDKLERWLKKVVMPLGPPDGSMDIIYLNTILHYDGVANRVHRSPLWESRKFRAIIEWPKRMDLWEKWEEVFLNEGEQAADDFYAQRKAEMDDGAVVSWPAMRPLLRLMKIRANDHHAFDCEYQNDPTNSENAPFQKLVYWVHPSDAWIYFGAHDPSMGKHNKGRDPCACLVGGLNRKTGVLDVVEAKIARMVPNLQIETIIAFQEEYGCLVWGIEIIQFQEFFKDVLVERSREKGVPVPARGIRSSDDKELRILSLQPHCANGTVRLHKSQTVLIEQLTHYPEADHDDGPDALQMLYMLAYSGLGSVIPKIKTGKRKVLPYGA
>NZ_CP038227.1|WP_038755846.1|2311212_2311710_+|DUF1804-family-protein
MAHDQKVRNQLRAKYLQGMPLTTAADVCNVSYQTARNWKRAAKEAGDDWDIARAAQRMSRTSIDNMTSQVVEEMSVQFLATLEELKSSQTLQPVQKADILARLSDSFIKTVNAAGRSNPKLATLSICMDVLRDFASFVQSKYPKEHARFIAYLEEFGQEVAKKYA
>NZ_CP038227.1|WP_009927781.1|2310918_2311209_+|hypothetical-protein
MNTNDLNDKVLLALGNIQGELRGIREMVQHGQQATNQRIDDLKGAVTERIDGLEDRVVKLEGDHGRLMAKTAGLGGVAGGAMTALVEVVRYFATKG
>NZ_CP038227.1|WP_150977223.1|2323136_2324942_-|sugar-ABC-transporter-ATP-binding-protein
MKAALTTAAASAAAAPDAAGAPFALDVRRVVKRFGGVAALRGASLAVTRGTVHGLIGQNGAGKSTLVKLLAGLHAPDEGEITVGGVPFASGGGGSRAPAGAARRHSTGIGFIHQERLLPATFTVAEALFFPHPPTLGGRASRLARLLPLDVKRMRRDCRAVLHTQFGLDLAPDRLIGELSVAEQQIVQITRALLGRHEILVFDEPSAALVSSEVDRLLRTIERLRANGHTILYVSHYLDEIARVCDRVSVLRDGADVAHFEARAVSRDTLVAAMIGAPQPAAAAPSAATARADARVSARADAWGDDPHRAPAGADPARRGARAAPGAIALEARDLALPGRFGPLSLAVRRGEIVGLTGGLGSGGKDVIRALFGLARGVRGSIAVDGRPARVRRPHDAVAHGIALVPENRAAHGVALTLPVRENVVLADLSSVSRFGLVHGRREADVARALIRRLDIRPARPDLPARFLSGGNQQKVALAKWLGRASTVYLLDEPTVGVDVGAKAQIYRLIDALARAGAAVLLFSSDLTELLDVTDRVYVMARGEIVAQCASAETTTQDVLAWATLARDARPGGGAGAHDAAARTGTPGAAGAASSAAKVAT
>NZ_CP038227.1|WP_052113866.1|2324938_2325988_-|sugar-ABC-transporter-substrate-binding-protein
MPRPLPSLARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQAYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKIRQAGIPLFTIDTASPSSLNVVTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAIRYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQLLQKYPKGTISAIWAAWDIPQVGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYLAGDRSLPAYTFVPSVLVTKDDAGVARPALGQAPAAAGLARR
>NZ_CP038227.1|WP_009933985.1|2325986_2326280_+|hypothetical-protein
MIGGSGFGRGSERTILCNDAREGNDRFVLWLWDGRKCAGRTSKDARRASDAAGAGARRAGGFAGVDADADIGGNPRSSPCRLDRNRAIANKLQRNAK
>NZ_CP038227.1|WP_150977221.1|2326296_2326527_-|hypothetical-protein
MIFPVRSNATVCEISIETRRAAAAPNHAARRPFVRVFQHADAEFRPRGTFPGGFRFIRCRPGGGIFRLARNQPLSI
>NZ_CP038227.1|WP_011205512.1|2326619_2327360_+|isoprenylcysteine-carboxylmethyltransferase-family-protein
MRRTGVFAMEHEVRPSMATTRRHATATALAAAARPCAAPHADSFLGILIEVFARVVAALALGVFAYAAYLQWRLDPSRITLILLAVSTTLTVGLSLFAEPPKKRDWSPLALFFSVGGTFYYLVFQLTASRQLLPEAAGAAIQLIGLFWQLFAKVSLRKSFGILPANRGIVSRGAYRFVRHPMYLGYLIIDAGFLLTNFSARNLIAVALQIGLQLGRIRREERLLSEDAAYRAYRRSVRYRVIPGLF
>NZ_CP038227.1|WP_004542791.1|2327332_2327539_-|hypothetical-protein
MWPARIAAPPARIGHARAAFRFGSRRLARPQAEANAARRRGGGASVAARGPASAQARRPAQNRPGITR
>NZ_CP038227.1|WP_004554968.1|2327693_2327945_-|hypothetical-protein
MFSTLSHVLPRVVLLGEPLANAPFVDGEITRPFRDGFWLLPYSTLCLPLAASDTVIVEPDRPGSAGALAGRQLDAGRQSPSPL
>NZ_CP038227.1|WP_004524124.1|2328107_2329367_-|monooxygenase
MSHAPADPTRSTGADYASLAARFRPIFARIAEGAIERDRTRALPHEPIRWLKEAGFGALRVPVHAGGAGASVPQLVQLLIELAAADSNLPQALRGHFAFVEDWLNAPPDAARRAWFDRFASGQLVGNAWTEVGDVALGEVRTKVAKRDGGWVVNGEKYYSTGAIFADWIDVYAQRTDDGGPVIAAVAARQDGVILGDDWDGFGQATTGSGTTRFVDAHVDEANVIDFARRFKYQTAFYQLFHLATLAGIGRAVERDASALVRGRRRVYSHGNAPRVSDDAQILQVVGEISAWAYAAEAIALRAAQPSQRAYEARGGGDAAAEHDANVAAEIESAQGQLVVSELVLRAATHLFDALGASATRATNALDRHWRNARTVASHNPLVYKARIVGDRAVNGTEPPYVWQIGAGPGGPREPEQAA
>NZ_CP038227.1|WP_150977219.1|2329570_2331046_-|MFS-transporter
MSTLDLDAPISTPIRTASDVSRLINASGARANHARVIVLLALGGVFLDAYDLTTLSYGIEDVTREFGLTPALSGLVSASIMIGTILGSLLGGWFTDKVGRYRVFMADMLCFVVAAIVAGLAPNVEVLIAARFVMGLGVGIDLPVAMAFLAEFSKFGGRGNKASRLAAWCPMWYAASSVCFLIVFGLYFALPAEHARWLWRASLIFGAVPALAIIAVRGRYMNESPLWAANQGKLRDAARILRESYGIRAHAADDTPRAAPSQPPVSFRVLFRQPYLPRTLVASAMNLCIPFEYTAIAFFLPTILTQFLGAGVFETIAATLALNVLFALTGGLLGMRLAYRLPSRRVAIAGFALQAAALVTLALLGHPQTALGIGAAVLMLGLWLFAEGFGPGAQMMIYPALSYPASIRGTGLGFGRALTGIGSAFALFVLPILNARLGAGMFWIVAIAAFVPIVFLAAIRFEPTARDVDVDIDIDAGSRAQGDRARVRAAA
>NZ_CP038227.1|WP_085955848.1|2331461_2332621_+|IS3-like-element-ISBps2-family-transposase
MVRRAFSEEFKEEAIRLVVEQGYPFSKACGAVGIGETALRRWVAQWRAAHSLDVPSPAQLSADARRIKELEARVAELEREREVFKKIHGLLRQGARTLLEVIQAMEKAYPVALMCRLAGVARSSYYAWRSRQGRSNRDATVLEAVRRIHEETRRSYGSRRMSQALRLLGHNVGRYRARSLMRQARLVRSKRVHRYRAAQAESLIAPNLLARRFDPAQRDQVWVGDITFVQTRQGWLYVAVVMDLYARRVVGWAFSQHADTDLALKALRRAYDHRRPPPGLMFHSDQGCQYTSTRFLAELRARGTIQSMSRRGNCWDNAVVERFFRSLKNEWIGDQLYVDHRHAEQDITDYLVDFYNHRRLHSAAKGLPPARFEALAAYPGAVSKVA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

117548 : 160855

Streptococcus_phage(20.0%)

protease,tRNA,portal,integrase,transposase

attL 113745:113763|attR 153976:153994

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
113745:113763	attL	NA	NA	NA	NA
WP_038802333.1\|117548_118669_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_058040323.1\|118908_125508_-	DUF3320 domain-containing protein	NA	NA	NA	NA
WP_009935573.1\|126750_127011_-	hypothetical protein	NA	NA	NA	NA
WP_009935574.1\|127147_127870_+\|integrase	integrase catalytic region	NA	NA	NA	NA
WP_025991576.1\|128232_128427_+	hypothetical protein	NA	NA	NA	NA
WP_004538372.1\|128517_129981_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	6.8e-80	38.6
WP_004552017.1\|130386_131427_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.2e-93	53.1
WP_004530324.1\|131566_132790_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_004190342.1\|132869_133082_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_004190948.1\|133248_133695_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	8.8e-23	48.6
WP_004530325.1\|133789_135664_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.4e-66	36.0
WP_004549232.1\|135710_136049_-	hypothetical protein	NA	NA	NA	NA
WP_004190933.1\|136107_138150_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	4.2e-35	32.0
WP_004538372.1\|138589_140053_-\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	6.8e-80	38.6
WP_004195713.1\|140171_140981_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_004525143.1\|141131_143036_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_004525142.1\|143119_144004_-	(2E,6E)-farnesyl diphosphate synthase	NA	NA	NA	NA
WP_004190549.1\|144000_144294_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_004190814.1\|144563_145670_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004190656.1\|145817_146687_+	sulfurtransferase	NA	NA	NA	NA
WP_004190499.1\|146745_147621_-	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_004525140.1\|147780_148002_-	hypothetical protein	NA	NA	NA	NA
WP_009934941.1\|148074_148167_-	hypothetical protein	NA	NA	NA	NA
WP_009950019.1\|148340_150134_+	membrane protein	NA	NA	NA	NA
WP_004190401.1\|150460_151843_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_076913543.1\|152152_154924_-	DNA polymerase I	S5M8J1	Bacillus_phage	4.9e-71	30.0
153976:153994	attR	NA	NA	NA	NA
WP_004530319.1\|154925_155675_+	TIGR00730 family Rossman fold protein	A0A1D8KUT5	Synechococcus_phage	5.6e-22	37.8
WP_004190924.1\|155671_155941_+	hypothetical protein	NA	NA	NA	NA
WP_004529031.1\|156092_156377_+	hypothetical protein	NA	NA	NA	NA
WP_009934946.1\|157036_157528_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_009926491.1\|157863_158040_-	hypothetical protein	NA	NA	NA	NA
WP_009934948.1\|157964_158228_-	hypothetical protein	NA	NA	NA	NA
WP_009934949.1\|158226_158400_+	hypothetical protein	NA	NA	NA	NA
WP_004529035.1\|158406_159633_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_123875335.1\|159749_159938_+	hypothetical protein	NA	NA	NA	NA
WP_004529037.1\|160186_160324_-	hypothetical protein	NA	NA	NA	NA
WP_004553592.1\|160567_160855_+\|portal	phage portal protein	K4NZV0	Burkholderia_phage	1.7e-43	94.4

DBSCAN-SWA_2

495322 : 553579

Streptococcus_phage(22.22%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004539275.1\|495322_496051_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
WP_004544687.1\|496097_496232_+	hypothetical protein	NA	NA	NA	NA
WP_076913332.1\|496270_497704_+	amidohydrolase family protein	NA	NA	NA	NA
WP_004552566.1\|497729_498383_+	glutathione S-transferase	NA	NA	NA	NA
WP_004539275.1\|498563_499292_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.2e-21	31.2
WP_004552499.1\|499301_499559_-	hypothetical protein	NA	NA	NA	NA
WP_123874560.1\|499721_499940_-	hypothetical protein	NA	NA	NA	NA
WP_025991558.1\|499923_501063_-	DUF746 domain-containing protein	NA	NA	NA	NA
WP_025991559.1\|501062_502823_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_004555168.1\|502865_503108_-	hypothetical protein	NA	NA	NA	NA
WP_150977081.1\|503362_512641_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_076808576.1\|512792_512990_-	hypothetical protein	NA	NA	NA	NA
WP_004533385.1\|512990_513254_-	hypothetical protein	NA	NA	NA	NA
WP_076859446.1\|513845_518477_-	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	8.3e-23	34.9
WP_004530178.1\|518490_519759_-	hypothetical protein	NA	NA	NA	NA
WP_009935222.1\|519774_521979_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.7e-42	28.0
WP_004529305.1\|521946_522162_+	hypothetical protein	NA	NA	NA	NA
WP_009935223.1\|522395_522842_-	hypothetical protein	NA	NA	NA	NA
WP_009935224.1\|522848_523142_+	hypothetical protein	NA	NA	NA	NA
WP_009935225.1\|523996_524596_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_004524853.1\|524620_525031_-	RidA family protein	NA	NA	NA	NA
WP_004530174.1\|526460_526808_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	72.0
WP_004524833.1\|526804_527212_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.2e-11	36.5
WP_004530171.1\|527644_529678_-	hypothetical protein	NA	NA	NA	NA
WP_004546333.1\|529918_532090_-	alpha-galactosidase	NA	NA	NA	NA
WP_004524829.1\|532094_532946_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004544732.1\|532946_533900_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_004524827.1\|533932_535174_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_004524825.1\|535209_536454_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
WP_009935227.1\|536496_537135_-	hypothetical protein	NA	NA	NA	NA
WP_131201358.1\|537969_538404_-	hypothetical protein	NA	NA	NA	NA
WP_076812937.1\|538698_538911_+	hypothetical protein	NA	NA	NA	NA
WP_009927050.1\|538907_539966_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_004552182.1\|541358_542144_+	hypothetical protein	NA	NA	NA	NA
WP_050376279.1\|542875_544135_-	DUF746 domain-containing protein	NA	NA	NA	NA
WP_076812934.1\|544094_544805_-	hypothetical protein	NA	NA	NA	NA
WP_004203275.1\|544820_547025_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
WP_004533146.1\|547021_549688_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_100227576.1\|549700_551146_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004553897.1\|551142_553014_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004196148.1\|553018_553579_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_3

960300 : 1024857

Ralstonia_phage(28.57%)

transposase,holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004187738.1\|960300_962496_+\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_076805246.1\|962693_962849_+	hypothetical protein	NA	NA	NA	NA
WP_099975938.1\|964397_965438_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004558008.1\|965401_965854_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004523728.1\|966315_967233_+	ABC transporter permease	NA	NA	NA	NA
WP_004544882.1\|967219_968074_+	ABC transporter permease	NA	NA	NA	NA
WP_004523726.1\|968070_969102_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004531014.1\|969727_970948_+\|transposase	ISL3-like element ISBma1 family transposase	A9YX10	Burkholderia_phage	1.1e-240	100.0
WP_004528499.1\|971057_971363_+	H-NS histone family protein	NA	NA	NA	NA
WP_080305612.1\|971691_974463_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	6.8e-89	34.8
WP_150977042.1\|974476_976717_+	DUF3274 domain-containing protein	A0A077K801	Ralstonia_phage	3.4e-22	27.4
WP_150977040.1\|976855_978391_+	DUF2875 domain-containing protein	NA	NA	NA	NA
WP_004524152.1\|978400_978664_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004523721.1\|979078_979498_-	YjbQ family protein	NA	NA	NA	NA
WP_004523720.1\|979517_979844_-	thioredoxin family protein	NA	NA	NA	NA
WP_004529617.1\|979929_980145_-	hypothetical protein	NA	NA	NA	NA
WP_004531588.1\|980076_980304_+	hypothetical protein	NA	NA	NA	NA
WP_004531587.1\|980315_981008_+	hypothetical protein	NA	NA	NA	NA
WP_009932418.1\|981046_981361_+	hypothetical protein	NA	NA	NA	NA
WP_038735890.1\|981400_981589_-	hypothetical protein	NA	NA	NA	NA
WP_076892633.1\|981593_982217_-	DUF2244 domain-containing protein	NA	NA	NA	NA
WP_004523716.1\|982303_983899_-	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	1.9e-06	33.3
WP_009932421.1\|983848_984136_+	hypothetical protein	NA	NA	NA	NA
WP_009932423.1\|984163_984418_-	hypothetical protein	NA	NA	NA	NA
WP_009932424.1\|985047_986505_-	hypothetical protein	NA	NA	NA	NA
WP_004523712.1\|986664_986853_-	hypothetical protein	NA	NA	NA	NA
WP_076809385.1\|986864_987329_+	hypothetical protein	NA	NA	NA	NA
WP_150977312.1\|988057_990163_+	hypothetical protein	A0A2C9CZG8	Yersinia_phage	4.9e-07	46.1
WP_004551161.1\|990229_991717_-	hypothetical protein	NA	NA	NA	NA
WP_004523708.1\|991752_991968_+	hypothetical protein	NA	NA	NA	NA
WP_004549711.1\|991978_992533_-	hypothetical protein	NA	NA	NA	NA
WP_004523706.1\|993117_993663_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_025991399.1\|993727_994465_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_076866615.1\|994688_997322_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004529637.1\|997314_997887_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_076892806.1\|997951_998608_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_009932432.1\|998610_1000287_+	OmpA family protein	NA	NA	NA	NA
WP_076892803.1\|1000433_1000631_+	hypothetical protein	NA	NA	NA	NA
WP_004523700.1\|1000676_1001216_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004523699.1\|1001249_1002749_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004529642.1\|1002948_1003431_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_095413485.1\|1003558_1004101_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004523698.1\|1004106_1005456_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_009932435.1\|1005452_1006754_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_009932436.1\|1006768_1010677_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_009932439.1\|1010866_1011436_+	hypothetical protein	NA	NA	NA	NA
WP_122799165.1\|1011500_1014146_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.2e-35	26.0
WP_004523693.1\|1014220_1014490_+	PAAR motif protein	NA	NA	NA	NA
WP_150977038.1\|1014502_1017955_+	RHS repeat protein	NA	NA	NA	NA
WP_004531572.1\|1017847_1019206_-	hypothetical protein	A0A292GJ55	Xanthomonas_phage	3.4e-110	45.2
WP_004529650.1\|1019238_1020267_-	fimbrial protein	NA	NA	NA	NA
WP_004529651.1\|1020321_1021392_-	type VI secretion protein ImpA	NA	NA	NA	NA
WP_004523688.1\|1021410_1022460_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004523687.1\|1022456_1024337_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004523686.1\|1024338_1024857_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

1573200 : 1644792

Vibrio_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004525541.1\|1573200_1573968_-\|holin	phosphocholine cytidylyltransferase family protein	NA	NA	NA	NA
WP_004206084.1\|1574006_1575008_-	HpnL family protein	NA	NA	NA	NA
WP_004525542.1\|1575004_1575778_-	hypothetical protein	NA	NA	NA	NA
WP_004188272.1\|1575774_1576464_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_004188420.1\|1576828_1578343_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_004525545.1\|1580062_1581001_+	hypothetical protein	NA	NA	NA	NA
WP_004202234.1\|1581034_1581583_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004530038.1\|1581579_1583091_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004530039.1\|1583234_1583762_+	hypothetical protein	NA	NA	NA	NA
WP_004190879.1\|1583841_1584273_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_004196180.1\|1584286_1586149_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004190851.1\|1586145_1587135_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_122648489.1\|1587137_1590008_+	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_050868720.1\|1589998_1592290_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004190563.1\|1592455_1594744_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004547074.1\|1594747_1596964_+	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|1596963_1598034_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004530790.1\|1598036_1598753_+	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004190606.1\|1598795_1599185_+	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004202226.1\|1599190_1599784_+	hypothetical protein	NA	NA	NA	NA
WP_004525552.1\|1599780_1601142_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004530043.1\|1601167_1602883_+	OmpA family protein	NA	NA	NA	NA
WP_004525554.1\|1602879_1606383_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004190863.1\|1606441_1606801_+	hypothetical protein	NA	NA	NA	NA
WP_004190471.1\|1606823_1607249_+	hypothetical protein	NA	NA	NA	NA
WP_004530793.1\|1607473_1607845_+	hypothetical protein	NA	NA	NA	NA
WP_009923697.1\|1607942_1608116_-	hypothetical protein	NA	NA	NA	NA
WP_004528661.1\|1608395_1609295_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_076846473.1\|1609392_1609521_+	hypothetical protein	NA	NA	NA	NA
WP_011857650.1\|1609528_1610848_+	glycosyltransferase	NA	NA	NA	NA
WP_011205597.1\|1610844_1612431_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_004524284.1\|1612671_1613667_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_038724161.1\|1613792_1613975_+	hypothetical protein	NA	NA	NA	NA
WP_004532078.1\|1613971_1615555_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_076883461.1\|1615538_1615835_+	hypothetical protein	NA	NA	NA	NA
WP_038730208.1\|1616047_1617301_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_076882195.1\|1617517_1617820_+	hypothetical protein	NA	NA	NA	NA
WP_150976984.1\|1617814_1619479_-	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	1.2e-56	31.4
WP_004530051.1\|1619611_1621177_-	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_004530052.1\|1621365_1622382_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|1622947_1624147_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004198247.1\|1624324_1625350_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_009933096.1\|1625519_1625771_+	hypothetical protein	NA	NA	NA	NA
WP_004523136.1\|1625782_1627057_+	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_004535113.1\|1627129_1628101_+	membrane dipeptidase	NA	NA	NA	NA
WP_004186987.1\|1628251_1628785_+	4-vinyl reductase	NA	NA	NA	NA
WP_150977306.1\|1628845_1630909_+	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186901.1\|1630911_1632837_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004202150.1\|1632841_1634014_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004530055.1\|1634010_1634796_+	drug:proton antiporter	NA	NA	NA	NA
WP_004523139.1\|1634820_1636089_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530056.1\|1636109_1637255_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004186918.1\|1637364_1638228_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530057.1\|1638408_1640064_+	APC family permease	NA	NA	NA	NA
WP_004186920.1\|1640150_1641026_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_076809203.1\|1641169_1642069_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186939.1\|1642204_1643758_+\|holin	choline-sulfatase	NA	NA	NA	NA
WP_076887547.1\|1643793_1644792_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA

DBSCAN-SWA_5

2205474 : 2316393

Burkholderia_phage(86.0%)

protease,terminase,plate,integrase,transposase,tail

attL 2235285:2235304|attR 2306088:2306107

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004526384.1\|2205474_2206737_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_004528254.1\|2207055_2208228_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_004551638.1\|2208613_2209846_-	sodium/hydrogen exchanger	NA	NA	NA	NA
WP_004528257.1\|2210265_2210400_-	hypothetical protein	NA	NA	NA	NA
WP_151018813.1\|2210447_2224199_+	SDR family NAD(P)-dependent oxidoreductase	D0R7J2	Paenibacillus_phage	2.7e-21	29.5
WP_151018855.1\|2224332_2241747_+	SDR family NAD(P)-dependent oxidoreductase	D0R7J2	Paenibacillus_phage	1.3e-23	33.2
2235285:2235304	attL	NA	NA	NA	NA
WP_151018815.1\|2241743_2256923_+	amino acid adenylation domain-containing protein	D0R7J2	Paenibacillus_phage	2.7e-86	45.2
WP_150977238.1\|2256906_2261601_+	DUF2156 domain-containing protein	NA	NA	NA	NA
WP_009957834.1\|2261683_2263342_+	halogenase	NA	NA	NA	NA
WP_004539123.1\|2263424_2264867_+	DHA2 family efflux MFS transporter permease subunit	A0A0M3UL24	Mycobacterium_phage	2.4e-53	37.5
WP_151018701.1\|2265490_2267410_-	CBS domain-containing protein	NA	NA	NA	NA
WP_004524104.1\|2267444_2267858_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004528269.1\|2267998_2269192_-	HPP family protein	NA	NA	NA	NA
WP_004524105.1\|2269253_2269517_-	hypothetical protein	NA	NA	NA	NA
WP_004198340.1\|2269537_2270509_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_038719591.1\|2270554_2270917_+	hypothetical protein	NA	NA	NA	NA
WP_004524106.1\|2271060_2272146_-	ionic transporter y4hA	NA	NA	NA	NA
WP_004542782.1\|2272873_2273662_+	MarC family protein	NA	NA	NA	NA
WP_004198335.1\|2273649_2273805_-	hypothetical protein	NA	NA	NA	NA
WP_004199327.1\|2274008_2274881_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_004199325.1\|2275092_2275797_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_011205503.1\|2275972_2277019_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004199295.1\|2277695_2277854_+	lipoprotein	NA	NA	NA	NA
WP_004199294.1\|2277869_2278391_+	sigma-70 family RNA polymerase sigma factor	A0A076YQ50	Rhizobium_phage	5.1e-06	27.1
WP_004551650.1\|2278387_2279212_+	anti-sigma factor	NA	NA	NA	NA
WP_004524113.1\|2279280_2280267_+	YceI family protein	NA	NA	NA	NA
WP_004198481.1\|2280306_2280666_+	hypothetical protein	NA	NA	NA	NA
WP_017882257.1\|2280662_2280890_+	hypothetical protein	NA	NA	NA	NA
WP_076886874.1\|2280886_2281105_+	hypothetical protein	NA	NA	NA	NA
WP_038791906.1\|2281224_2281659_-\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	2.3e-44	76.5
WP_009927864.1\|2281672_2282959_-	hypothetical protein	A4JWL8	Burkholderia_virus	6.5e-127	61.9
WP_009927863.1\|2282970_2283567_-	DUF2313 domain-containing protein	B5TAB0	Burkholderia_phage	2.0e-59	61.7
WP_076949407.1\|2283566_2284688_-\|plate	baseplate J/gp47 family protein	B5TAA9	Burkholderia_phage	6.9e-149	70.8
WP_038724610.1\|2284684_2285272_-\|tail	tail protein	B5TAA8	Burkholderia_phage	9.0e-76	67.7
WP_100565532.1\|2285357_2285852_-\|plate	baseplate assembly protein	B5TAA7	Burkholderia_phage	2.0e-52	62.0
WP_009927857.1\|2285848_2287015_-	bacteriophage Mu P	B5TAA6	Burkholderia_phage	8.9e-184	80.3
WP_100565531.1\|2287018_2288395_-	multidrug DMT transporter	B5TAA5	Burkholderia_phage	1.2e-192	74.0
WP_100565530.1\|2288394_2291070_-\|tail	phage tail protein	B5TAA4	Burkholderia_phage	3.0e-203	60.4
WP_058040209.1\|2291118_2291667_-	hypothetical protein	B5TAA3	Burkholderia_phage	6.9e-62	67.9
WP_038724605.1\|2291760_2292132_-	hypothetical protein	B5TAA2	Burkholderia_phage	1.2e-46	72.4
WP_058040208.1\|2292178_2293657_-\|tail	phage tail protein	B5TAA1	Burkholderia_phage	6.8e-221	76.0
WP_058040207.1\|2293703_2293970_-	hypothetical protein	B5TAA0	Burkholderia_phage	1.4e-15	63.2
WP_058040206.1\|2293956_2294553_-	DUF1834 family protein	B5TA99	Burkholderia_phage	7.8e-51	51.8
WP_058040205.1\|2294552_2294987_-	virion morphogenesis protein	B5TA98	Burkholderia_phage	1.3e-55	75.7
WP_058040204.1\|2294983_2295487_-	DUF1320 domain-containing protein	B5TA97	Burkholderia_phage	2.0e-87	91.6
WP_076949414.1\|2295483_2295885_-	hypothetical protein	B5TA96	Burkholderia_phage	8.5e-09	67.9
WP_038755861.1\|2295958_2296906_-	hypothetical protein	B5TA95	Burkholderia_phage	9.8e-165	92.7
WP_150977234.1\|2296961_2297318_-	hypothetical protein	B5TA94	Burkholderia_phage	7.4e-41	76.3
WP_009927838.1\|2297362_2298511_-	hypothetical protein	B5TA92	Burkholderia_phage	9.1e-181	83.1
WP_150977232.1\|2298726_2299128_-	hypothetical protein	B5TA91	Burkholderia_phage	1.4e-59	86.5
WP_058040201.1\|2299124_2299559_-	regulatory protein GemA	B5TA90	Burkholderia_phage	2.4e-57	81.7
WP_009927831.1\|2299560_2299872_-	hypothetical protein	B5TA89	Burkholderia_phage	4.4e-29	63.6
WP_058040200.1\|2300023_2300341_-	hypothetical protein	B5TA88	Burkholderia_phage	2.2e-07	68.3
WP_058040199.1\|2300429_2300702_-	HU family DNA-binding protein	B5TA87	Burkholderia_phage	3.3e-33	85.6
WP_058040198.1\|2300765_2301158_-	ASCH domain-containing protein	B5TA86	Burkholderia_phage	8.7e-59	82.3
WP_038724592.1\|2301171_2301798_-	DUF3164 family protein	B5TA85	Burkholderia_phage	3.3e-100	90.4
WP_058040197.1\|2301794_2302382_-	hypothetical protein	B5TA84	Burkholderia_phage	1.3e-82	91.8
WP_038721762.1\|2302368_2302674_-	hypothetical protein	B5TA83	Burkholderia_phage	6.4e-33	73.3
WP_038790982.1\|2302670_2302859_-	hypothetical protein	B5TA82	Burkholderia_phage	5.9e-13	65.5
WP_009927794.1\|2302866_2303859_-	AAA family ATPase	B5TA81	Burkholderia_phage	1.1e-166	87.9
WP_058040196.1\|2303868_2305494_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	B5TA80	Burkholderia_phage	2.0e-303	95.6
WP_058040195.1\|2305533_2306580_-	hypothetical protein	B5TA79	Burkholderia_phage	2.4e-135	77.3
2306088:2306107	attR	NA	NA	NA	NA
WP_009927791.1\|2306576_2306768_-	DNA-binding protein	B5TA78	Burkholderia_phage	2.7e-21	89.3
WP_038724587.1\|2306849_2307335_+	helix-turn-helix transcriptional regulator	B5TA77	Burkholderia_phage	1.3e-51	72.0
WP_038756160.1\|2307378_2307912_+	hypothetical protein	B5TA76	Burkholderia_phage	9.1e-67	74.6
WP_009927787.1\|2308277_2308760_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_058040194.1\|2308756_2309029_+	hypothetical protein	NA	NA	NA	NA
WP_038721770.1\|2309149_2309461_+	membrane protein	B5TA74	Burkholderia_phage	4.4e-37	70.2
WP_058040193.1\|2309457_2310132_+	lytic transglycosylase domain-containing protein	B5TA73	Burkholderia_phage	6.9e-88	70.1
WP_076949408.1\|2310128_2310593_+	hypothetical protein	NA	NA	NA	NA
WP_038724579.1\|2310700_2310922_+	hypothetical protein	B5TA71	Burkholderia_phage	4.3e-31	89.0
WP_009927781.1\|2310918_2311209_+	hypothetical protein	B5TA70	Burkholderia_phage	1.3e-40	89.6
WP_038755846.1\|2311212_2311710_+	DUF1804 family protein	B5TA69	Burkholderia_phage	3.5e-81	93.9
WP_150977229.1\|2311716_2313333_+\|terminase	phage terminase large subunit	B5TA68	Burkholderia_phage	6.3e-305	92.8
WP_058040191.1\|2313322_2314855_+	DUF935 family protein	B5TA67	Burkholderia_phage	2.9e-251	89.5
WP_009927776.1\|2314899_2315160_+	hypothetical protein	B5TA66	Burkholderia_phage	1.0e-23	72.1
WP_038791867.1\|2315160_2316393_+	hypothetical protein	B5TA65	Burkholderia_phage	6.1e-215	89.0

DBSCAN-SWA_6

2331461 : 2415565

Burkholderia_virus(46.43%)

protease,head,plate,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085955848.1\|2331461_2332620_+\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	5.0e-78	99.3
WP_004539128.1\|2332728_2332977_-	hypothetical protein	NA	NA	NA	NA
WP_004539130.1\|2333437_2333638_-	hypothetical protein	NA	NA	NA	NA
WP_004524130.1\|2333630_2333903_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_004184766.1\|2334006_2335401_-	heavy metal sensor histidine kinase IrlS	W8CYF6	Bacillus_phage	1.2e-20	28.9
WP_004197868.1\|2335397_2336087_-	heavy metal response regulator transcription factor IrlR	W8CYM9	Bacillus_phage	1.7e-36	36.8
WP_076891338.1\|2336093_2339327_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_024428522.1\|2339372_2340842_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_006485401.1\|2342469_2342841_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	8.5e-64	100.0
WP_151018817.1\|2342837_2343278_-	regulatory protein GemA	Q6QIE7	Burkholderia_phage	1.6e-72	93.8
WP_025992374.1\|2343261_2343603_-	DUF2528 family protein	Q6QIE6	Burkholderia_phage	4.2e-57	95.6
WP_009910736.1\|2343696_2343969_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	8.2e-40	96.7
WP_009910737.1\|2344032_2344650_-	DUF3164 family protein	A4JWM8	Burkholderia_virus	6.3e-112	99.5
WP_009910738.1\|2344773_2344983_-	hypothetical protein	NA	NA	NA	NA
WP_009910739.1\|2344979_2345309_-	hypothetical protein	Q6QIE2	Burkholderia_phage	3.6e-50	89.8
WP_151018857.1\|2345310_2346522_-	AAA family ATPase	A4JWN1	Burkholderia_virus	1.6e-220	99.0
WP_151018819.1\|2346521_2348321_-\|transposase	transposase family protein	Q6QIE0	Burkholderia_phage	0.0e+00	97.0
WP_151018821.1\|2348338_2349265_-	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.2e-127	80.8
WP_151018823.1\|2349278_2349584_-	helix-turn-helix domain-containing protein	Q6QID7	Burkholderia_phage	1.0e-38	84.5
WP_151018825.1\|2349580_2350060_-	hypothetical protein	Q6QID6	Burkholderia_phage	9.3e-87	98.1
WP_060220689.1\|2350180_2350417_+	hypothetical protein	Q6QID5	Burkholderia_phage	9.0e-35	96.2
WP_006485399.1\|2350465_2350708_-	DNA-binding protein	Q6QID3	Burkholderia_phage	4.4e-37	100.0
WP_151018827.1\|2350801_2351233_+	hypothetical protein	NA	NA	NA	NA
WP_151018829.1\|2351236_2352070_+	hypothetical protein	Q6QID1	Burkholderia_phage	1.4e-08	42.4
WP_151018831.1\|2352138_2352660_+	hypothetical protein	NA	NA	NA	NA
WP_009910756.1\|2352776_2352965_+	hypothetical protein	A4JWP0	Burkholderia_virus	5.0e-28	100.0
WP_009910758.1\|2352945_2353482_+	hypothetical protein	A4JWP1	Burkholderia_virus	3.7e-92	98.3
WP_151018832.1\|2353549_2353774_+	hypothetical protein	A4JWP2	Burkholderia_virus	5.5e-34	98.6
WP_006485400.1\|2353840_2354188_+	membrane protein	Q6QIC8	Burkholderia_phage	8.0e-56	100.0
WP_009910760.1\|2354190_2354802_+	transglycosylase SLT domain-containing protein	Q6QIC7	Burkholderia_phage	4.5e-110	97.5
WP_038769559.1\|2354798_2355398_+	hypothetical protein	A4JWP5	Burkholderia_virus	3.5e-91	89.9
WP_025992379.1\|2355394_2355733_+	hypothetical protein	A4JWP6	Burkholderia_virus	1.4e-52	99.1
WP_006485389.1\|2355729_2356062_+	hypothetical protein	Q6QIC3	Burkholderia_phage	8.7e-60	100.0
WP_009910765.1\|2356063_2356609_+	DUF3486 family protein	A4JWJ3	Burkholderia_virus	3.0e-89	100.0
WP_151018834.1\|2356605_2358108_+	hypothetical protein	A4JWJ4	Burkholderia_virus	3.1e-290	98.6
WP_015985080.1\|2358104_2359580_+	DUF935 domain-containing protein	A4JWJ5	Burkholderia_virus	4.3e-284	100.0
WP_038798100.1\|2359572_2360409_+\|head	phage head morphogenesis protein	A4JWJ6	Burkholderia_virus	7.9e-166	99.6
WP_009910771.1\|2360405_2360933_+	phage virion morphogenesis protein	A4JWJ7	Burkholderia_virus	2.8e-92	100.0
WP_151018859.1\|2361147_2362263_+	peptidase	A4JWJ9	Burkholderia_virus	3.3e-196	91.6
WP_038798135.1\|2362308_2363232_+	hypothetical protein	A4JWK0	Burkholderia_virus	3.4e-170	99.3
WP_151018836.1\|2363306_2363639_+	DUF2190 family protein	A4JWK1	Burkholderia_virus	2.8e-50	98.2
WP_009910777.1\|2363640_2364093_+	DUF1320 domain-containing protein	A4JWK2	Burkholderia_virus	6.1e-80	99.3
WP_038798103.1\|2364092_2364557_+	hypothetical protein	A4JWK3	Burkholderia_virus	6.9e-79	96.1
WP_009910780.1\|2364553_2364799_+	hypothetical protein	Q6QIB1	Burkholderia_phage	5.3e-38	98.8
WP_009910781.1\|2364802_2366236_+\|tail	tail protein	A4JWK5	Burkholderia_virus	5.7e-265	97.1
WP_009910782.1\|2366238_2366763_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	7.2e-93	97.1
WP_025992380.1\|2366884_2367214_+\|tail	phage tail assembly protein	A4JWK7	Burkholderia_virus	3.8e-47	93.6
WP_050791341.1\|2367140_2367344_+	hypothetical protein	Q6QIA7	Burkholderia_phage	3.7e-29	95.5
WP_009910787.1\|2367346_2367589_-	hypothetical protein	A4JWK9	Burkholderia_virus	1.7e-33	95.0
WP_151018838.1\|2367618_2370231_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	0.0e+00	96.3
WP_151018840.1\|2370232_2371123_+\|tail	phage tail protein	Q6QIA4	Burkholderia_phage	9.7e-106	99.2
WP_009910792.1\|2371122_2371332_+	membrane protein	Q6QIA3	Burkholderia_phage	3.1e-31	94.2
WP_151018842.1\|2371319_2372528_+	phage protein D	A4JWL3	Burkholderia_virus	1.3e-214	98.5
WP_038798106.1\|2372524_2373127_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	4.9e-101	97.5
WP_009910797.1\|2373180_2373534_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.0e-62	99.1
WP_009910798.1\|2373530_2374682_+\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	1.4e-197	93.5
WP_038798108.1\|2374674_2375256_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.2e-93	90.2
WP_151018861.1\|2376449_2377271_+\|tail	phage tail protein	A9YX14	Burkholderia_phage	5.8e-97	76.7
WP_151018844.1\|2377407_2378481_-	acyltransferase	A9YX16	Burkholderia_phage	5.1e-85	46.6
WP_004197874.1\|2378892_2379078_-	hypothetical protein	NA	NA	NA	NA
WP_004532722.1\|2379094_2379379_-	hypothetical protein	NA	NA	NA	NA
WP_004524134.1\|2379776_2379917_-	bacteriophage protein	NA	NA	NA	NA
WP_004197879.1\|2380617_2381106_-	membrane protein	NA	NA	NA	NA
WP_004197880.1\|2381437_2381923_+	YbaK/EbsC family protein	NA	NA	NA	NA
WP_004528294.1\|2382277_2383393_-	alanine dehydrogenase	NA	NA	NA	NA
WP_004536620.1\|2383457_2383691_-	hypothetical protein	NA	NA	NA	NA
WP_004524142.1\|2384117_2384447_-	H-NS histone family protein	NA	NA	NA	NA
WP_011205535.1\|2384460_2385012_-	hypothetical protein	NA	NA	NA	NA
WP_004543456.1\|2385022_2385307_-	hypothetical protein	NA	NA	NA	NA
WP_004528297.1\|2385347_2385527_+	hypothetical protein	NA	NA	NA	NA
WP_075019091.1\|2385451_2386288_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_004528299.1\|2386655_2387231_+	DUF2760 domain-containing protein	NA	NA	NA	NA
WP_004539133.1\|2387227_2389075_+	Hsp70 family protein	NA	NA	NA	NA
WP_004553375.1\|2389078_2391886_+	hsp70 family protein	A0A2H4UU19	Bodo_saltans_virus	1.7e-07	26.1
WP_009968343.1\|2392174_2393308_-	CapA family protein	S4VS02	Pandoravirus	7.2e-114	56.2
WP_004554974.1\|2393876_2394137_-	hypothetical protein	NA	NA	NA	NA
WP_024428523.1\|2395623_2396247_-	hypothetical protein	NA	NA	NA	NA
WP_044353068.1\|2396298_2398812_-	cation-translocating P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	4.8e-57	27.9
WP_085547278.1\|2398909_2399389_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_011205539.1\|2400402_2401212_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_076891343.1\|2401188_2401470_-	hypothetical protein	NA	NA	NA	NA
WP_009981568.1\|2401466_2402897_-	thiamine pyridinylase	NA	NA	NA	NA
WP_004542833.1\|2402986_2403787_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_076911642.1\|2403783_2404011_-	heat-shock protein Hsp70	NA	NA	NA	NA
WP_004528317.1\|2404028_2404769_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004528318.1\|2404784_2405774_-	thymidylate synthase	NA	NA	NA	NA
WP_004528319.1\|2405775_2406231_-	hypothetical protein	NA	NA	NA	NA
WP_011205540.1\|2406227_2406791_-	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.9e-14	42.9
WP_004531806.1\|2407289_2408084_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_150977214.1\|2408140_2409289_+	DUF971 domain-containing protein	NA	NA	NA	NA
WP_004528326.1\|2409484_2410321_-	EamA family transporter	NA	NA	NA	NA
WP_150977212.1\|2411004_2412495_+	arginine-ornithine antiporter	NA	NA	NA	NA
WP_004531808.1\|2412803_2413412_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_004528329.1\|2413564_2415565_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	6.4e-105	46.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP038226

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

426121 : 437097

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196461.1\|426121_428422_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1
WP_004194131.1\|428418_428733_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196460.1\|429265_429469_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004546221.1\|429598_431218_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_004189626.1\|431230_431413_+	hypothetical protein	NA	NA	NA	NA
WP_004189552.1\|431385_432645_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_004189780.1\|432912_433491_+	pseudouridine synthase	NA	NA	NA	NA
WP_071810810.1\|433753_433972_+	hypothetical protein	NA	NA	NA	NA
WP_004526282.1\|434163_434673_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	4.2e-13	42.2
WP_071897722.1\|434669_434858_+	hypothetical protein	NA	NA	NA	NA
WP_004197486.1\|434982_437097_+	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7

DBSCAN-SWA_2

1467173 : 1478402

Burkholderia_virus(22.22%)

integrase

attL 1464578:1464594|attR 1481183:1481199

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1464578:1464594	attL	NA	NA	NA	NA
WP_004524472.1\|1467173_1469261_+	AAA family ATPase	A7KV33	Bacillus_phage	1.9e-99	35.8
WP_004202928.1\|1469583_1470483_-	cytochrome c	NA	NA	NA	NA
WP_076804979.1\|1471314_1471494_-	hypothetical protein	NA	NA	NA	NA
WP_004533467.1\|1471509_1472253_+\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	1.9e-54	47.3
WP_009922658.1\|1472632_1472950_+	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004530410.1\|1472949_1473867_+	hypothetical protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009932250.1\|1474120_1474663_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	8.1e-47	55.8
WP_009932249.1\|1474920_1475373_+	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_004530408.1\|1475372_1476452_+	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_004525721.1\|1476608_1476857_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_076859550.1\|1477700_1478402_+	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	3.7e-07	30.5
1481183:1481199	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1699787 : 1714892

Burkholderia_phage(42.86%)

tail,plate,transposase,integrase,protease

attL 1696395:1696411|attR 1705440:1705456

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1696395:1696411	attL	NA	NA	NA	NA
WP_004535032.1\|1699787_1700315_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.0e-21	51.0
WP_004555439.1\|1700974_1701979_+	AAA family ATPase	Q677Q6	Lymphocystis_disease_virus	2.6e-14	31.7
WP_004555440.1\|1702035_1704333_+	S8 family peptidase	NA	NA	NA	NA
WP_100209513.1\|1704291_1704807_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	4.0e-27	52.5
WP_123903074.1\|1704731_1705259_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	S5WIU1	Leptospira_phage	5.1e-30	49.2
WP_028358682.1\|1705346_1705760_+\|tail	phage tail protein I	K4NXA0	Burkholderia_phage	6.8e-70	99.2
1705440:1705456	attR	NA	NA	NA	NA
WP_122798709.1\|1705756_1706260_+	site-specific DNA-methyltransferase	K4NZW3	Burkholderia_phage	2.1e-81	90.6
WP_111963042.1\|1706655_1707246_+	hypothetical protein	NA	NA	NA	NA
WP_004547581.1\|1707349_1707715_-	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	1.5e-52	88.4
WP_004521948.1\|1707816_1708602_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004521949.1\|1708598_1709945_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521950.1\|1710053_1710668_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004531875.1\|1711042_1711714_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521952.1\|1711750_1712269_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004521953.1\|1712285_1713776_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004527837.1\|1713848_1714352_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011205263.1\|1714379_1714892_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_4

2043904 : 2053160

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004194034.1\|2043904_2045857_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2
WP_004533593.1\|2046122_2047253_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	3.8e-22	27.6
WP_058040641.1\|2047286_2049305_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	7.0e-51	34.2
WP_004194137.1\|2049488_2050304_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_004532195.1\|2050368_2051052_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_009971015.1\|2051048_2051576_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_004522151.1\|2051612_2053160_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2

DBSCAN-SWA_5

2390294 : 2399182

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004522358.1\|2390294_2391695_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-79	38.5
WP_004522359.1\|2391663_2392650_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	6.7e-15	26.8
WP_004190173.1\|2392708_2393701_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_004189725.1\|2393772_2394090_+	competence protein ComE	NA	NA	NA	NA
WP_076853525.1\|2394102_2394429_+	hypothetical protein	NA	NA	NA	NA
WP_004550116.1\|2394440_2395343_+	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_151018678.1\|2395569_2396946_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_122656575.1\|2397073_2397997_+	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	3.2e-43	36.2
WP_004547474.1\|2398339_2399182_-	alpha/beta hydrolase	A7XCB7	Tanapox_virus	5.5e-18	27.0

DBSCAN-SWA_6

2689388 : 2762371

uncultured_Caudovirales_phage(26.32%)

tRNA,head,portal,terminase,tail,plate,capsid,integrase,protease

attL 2686050:2686067|attR 2761769:2761786

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2686050:2686067	attL	NA	NA	NA	NA
WP_004192745.1\|2689388_2690054_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_004191887.1\|2690062_2691265_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_150976902.1\|2691261_2691879_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004191516.1\|2691923_2692826_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_004544024.1\|2692936_2694079_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_076903200.1\|2694083_2694860_+	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	1.5e-09	26.6
WP_004550225.1\|2695100_2695355_-	lipoprotein	NA	NA	NA	NA
WP_009904701.1\|2695260_2695530_-	hypothetical protein	NA	NA	NA	NA
WP_076887471.1\|2695586_2696750_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004524740.1\|2696842_2697388_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_038741765.1\|2697367_2698666_-	hypothetical protein	NA	NA	NA	NA
WP_137984612.1\|2698652_2701325_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	9.3e-27	24.3
WP_024430959.1\|2701496_2702798_+\|integrase	integrase family protein	C7BGE7	Burkholderia_phage	2.6e-147	58.7
WP_009890227.1\|2702748_2702991_-	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
WP_004555249.1\|2702999_2703473_-	hypothetical protein	B5TA88	Burkholderia_phage	2.3e-05	71.4
WP_004555250.1\|2703481_2703811_-	hypothetical protein	NA	NA	NA	NA
WP_150976904.1\|2703924_2705241_-	pyridoxal phosphate biosynthetic protein PdxJ	NA	NA	NA	NA
WP_004533966.1\|2705240_2705690_-	hypothetical protein	NA	NA	NA	NA
WP_038758333.1\|2705686_2706292_-	hypothetical protein	NA	NA	NA	NA
WP_004533940.1\|2706288_2706624_-	hypothetical protein	NA	NA	NA	NA
WP_004550209.1\|2706675_2706894_-	hypothetical protein	NA	NA	NA	NA
WP_038758334.1\|2707026_2707500_-	hypothetical protein	NA	NA	NA	NA
WP_076840169.1\|2707444_2707954_-	helix-turn-helix transcriptional regulator	G9L6A6	Escherichia_phage	3.6e-12	42.1
WP_085955187.1\|2708104_2708284_+	hypothetical protein	NA	NA	NA	NA
WP_009927752.1\|2708383_2708911_+	hypothetical protein	C7BGG0	Burkholderia_phage	9.7e-29	46.5
WP_004555255.1\|2708924_2709257_+	hypothetical protein	NA	NA	NA	NA
WP_143293908.1\|2709284_2709800_-	hypothetical protein	NA	NA	NA	NA
WP_004555256.1\|2709858_2710422_+	hypothetical protein	NA	NA	NA	NA
WP_024430956.1\|2710485_2710665_+	hypothetical protein	NA	NA	NA	NA
WP_004555257.1\|2710795_2711266_+	hypothetical protein	NA	NA	NA	NA
WP_150976906.1\|2711385_2713878_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	4.7e-97	41.8
WP_017844234.1\|2714095_2714869_+	hypothetical protein	NA	NA	NA	NA
WP_123903065.1\|2715029_2715389_+	hypothetical protein	NA	NA	NA	NA
WP_123903064.1\|2715339_2715648_-	hypothetical protein	NA	NA	NA	NA
WP_024430516.1\|2715789_2715978_+	hypothetical protein	NA	NA	NA	NA
WP_009935700.1\|2716073_2716643_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004552756.1\|2716605_2718591_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	2.1e-180	53.4
WP_004533700.1\|2718601_2718808_+	hypothetical protein	NA	NA	NA	NA
WP_122766286.1\|2718804_2720298_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	7.5e-135	51.2
WP_004555261.1\|2720294_2721395_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	7.9e-49	36.3
WP_004539732.1\|2721421_2721766_+\|head	head decoration protein	NA	NA	NA	NA
WP_004550216.1\|2721800_2722826_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	1.7e-109	59.1
WP_004555262.1\|2722829_2723120_+	hypothetical protein	NA	NA	NA	NA
WP_004539763.1\|2723121_2723652_+\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	9.2e-11	28.0
WP_004533675.1\|2723641_2724175_+	hypothetical protein	Q9JML9	Wolbachia_phage	6.2e-23	39.5
WP_122657137.1\|2724177_2724858_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	1.2e-18	34.4
WP_004547866.1\|2724922_2725129_+	hypothetical protein	NA	NA	NA	NA
WP_004547840.1\|2725125_2725470_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004547860.1\|2725466_2726360_+\|plate	baseplate J protein	D5LGZ3	Escherichia_phage	6.4e-49	40.7
WP_004547894.1\|2726352_2726928_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.0e-32	47.7
WP_004552413.1\|2726915_2728379_+	hypothetical protein	A4JWL8	Burkholderia_virus	1.6e-214	78.2
WP_009909071.1\|2728394_2728847_+\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	4.8e-45	77.7
WP_076900924.1\|2728912_2730082_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	8.1e-161	72.9
WP_004552768.1\|2730092_2730596_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	4.3e-42	50.6
WP_004552769.1\|2730665_2730968_+\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.5e-05	37.2
WP_076889983.1\|2731055_2733470_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	5.2e-69	33.5
WP_004547832.1\|2733478_2734360_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.5e-29	36.6
WP_004540041.1\|2734334_2734541_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.0e-15	61.2
WP_122656927.1\|2734550_2735603_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.0e-79	45.8
WP_004533694.1\|2735678_2735873_+	hypothetical protein	NA	NA	NA	NA
WP_050883818.1\|2735865_2736408_+	lysozyme	A4JX20	Burkholderia_virus	1.3e-84	90.6
WP_038712566.1\|2736407_2736953_+	lysozyme	Q8W6S5	Burkholderia_virus	1.0e-81	95.0
WP_076819500.1\|2737096_2737885_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	6.7e-151	96.6
WP_076812051.1\|2737920_2738229_-	hypothetical protein	A4PE26	Ralstonia_virus	5.0e-25	62.1
WP_076910187.1\|2738660_2739260_-	hypothetical protein	NA	NA	NA	NA
WP_004534452.1\|2739601_2740111_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	9.7e-18	37.7
WP_004534755.1\|2740107_2740533_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	49.4
WP_122794587.1\|2741752_2742061_+	hypothetical protein	NA	NA	NA	NA
WP_122836968.1\|2742035_2742992_+	RNA-directed DNA polymerase	Q7M2A9	Enterobacteria_phage	1.7e-47	38.7
WP_004534728.1\|2743299_2743560_-	hypothetical protein	NA	NA	NA	NA
WP_004534916.1\|2743549_2743999_+	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	1.8e-47	68.5
WP_004534654.1\|2744343_2746296_+	AAA family ATPase	NA	NA	NA	NA
WP_080002259.1\|2746481_2746688_-	hypothetical protein	NA	NA	NA	NA
WP_038714120.1\|2746948_2748088_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024430922.1\|2748084_2748918_+	hypothetical protein	NA	NA	NA	NA
WP_076853220.1\|2749117_2749357_-	DNA mismatch repair protein	NA	NA	NA	NA
WP_004192883.1\|2749419_2749647_+	hypothetical protein	NA	NA	NA	NA
WP_076809161.1\|2749632_2749824_-	hypothetical protein	NA	NA	NA	NA
WP_009954883.1\|2750155_2750371_+	hypothetical protein	NA	NA	NA	NA
WP_009921282.1\|2750274_2750526_-	hypothetical protein	NA	NA	NA	NA
WP_004527347.1\|2750554_2750827_+	hypothetical protein	NA	NA	NA	NA
WP_004191664.1\|2751095_2751899_-	inositol monophosphatase	NA	NA	NA	NA
WP_004532151.1\|2751942_2752194_+	hypothetical protein	NA	NA	NA	NA
WP_014917760.1\|2752190_2753105_+	RNA methyltransferase	NA	NA	NA	NA
WP_004193377.1\|2753295_2754081_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_009921276.1\|2754135_2754348_+	hypothetical protein	NA	NA	NA	NA
WP_004550230.1\|2754416_2755217_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004193779.1\|2755241_2755733_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	4.2e-10	33.3
WP_004191635.1\|2755813_2756389_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	5.3e-12	39.3
WP_004191389.1\|2756445_2757111_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004192752.1\|2757399_2758797_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.8e-42	33.8
WP_004205123.1\|2758844_2759783_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_004193249.1\|2759886_2760858_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_009931101.1\|2760901_2762371_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
2761769:2761786	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3813597 : 3820373

Burkholderia_virus(33.33%)

integrase

attL 3805508:3805523|attR 3817166:3817181

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3805508:3805523	attL	NA	NA	NA	NA
WP_076838831.1\|3813597_3814023_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.3e-15	50.6
WP_038728717.1\|3814019_3814526_+	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	3.9e-19	39.4
WP_038728719.1\|3814518_3814992_+	hypothetical protein	NA	NA	NA	NA
WP_076831547.1\|3815026_3815470_+	hypothetical protein	NA	NA	NA	NA
WP_076846902.1\|3815835_3816174_+	hypothetical protein	A4PE26	Ralstonia_virus	3.2e-25	58.0
WP_009941993.1\|3816194_3816401_-	hypothetical protein	Q8W6S4	Burkholderia_virus	3.7e-16	86.7
WP_071810706.1\|3816351_3816780_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5NNJ1	Burkholderia_phage	4.6e-21	47.4
WP_004521810.1\|3817088_3817919_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
3817166:3817181	attR	NA	NA	NA	NA
WP_029671251.1\|3818163_3818271_-	hypothetical protein	NA	NA	NA	NA
WP_004526695.1\|3818466_3819375_+	hypothetical protein	NA	NA	NA	NA
WP_004192768.1\|3819671_3820373_+	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	9.9e-13	44.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP038227

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP038226

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection