CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP044257	Salmonella enterica strain CFSAN096147 chromosome, complete genome	2 crisprs	PD-DExK,WYL,csa3,cas3,DEDDh,DinG,RT	1	13	5	0
NZ_CP044256	Salmonella enterica strain CFSAN096147 plasmid pCFSAN096147, complete sequence	0 crisprs	csa3	0	0	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP044257_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044257_1

895907-897217

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

21 spacers

The CRISPR arrays of NZ_CP044257_1

>merge|NZ_CP044257|1|895907-897217|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCCTTCGTTATTTACGACATTAACATTAACCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCTTAATGCTTTTTCGTCCGCCCATAGAAATAAGTGTTCCCCGCGCCAGCGGAGATAAACCGGTATCAAAGGTCATCAGGTGTTCGCCTTTCAGCGTGTTCCCCGCGCCAGCGGGGATAAACCAGCAGATTGGTATCTGGTACGACGACTGCCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGACTGTTAAAATGCTTCAGGACGGTGAAGTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCCACTGTACCGCCGACAGGACTTTTTAACGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAGGCGCTGGACGCGCTGCACAGACAGTCCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCGGTCGAGGTGGCGAGGTTGATAGCAGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGAATATGTTGATCGGGATTCTGGCCGCACTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTTATCGCTCTGAGAGTGGCGCTCGTTACTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGCTGACCATGATTGCAGTCAGGGTCGGCATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGAATGATGAAACGAATTAGTAAAAACAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATGGCATAGCCACCCCAGACAGTGGCTTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGACCGATCCGGGAACAACCGGAACAACGCGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTAACGCTGGCGTGATAATTTTGGTCGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGCAATACGACTGGACTGGATTTGATTCATTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGAGCCTGGAGCTCTCGACTCCTGATTTTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTAACGTCCTTTGCTGGTGTTTTTGTGTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACACCAACATTACGGCACGCAAGAGGTTATGTGTTCCCTGCGCCAGCGGGGATAAACCGGTTGGAGGGCGGTTCTGATGGCGAAACTTATCGTGTTCCCCGCGCCAGCGGGGATAAACCGTACCAACAATTCAGCGTTACGCCAACGGTAACGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP044257|1|1|895907-897156|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP044257|1|1|895907-897217|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP044257|1|1|895907-897217|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCTTCGTTATTTACGACATTAACATTAACCGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTTAATGCTTTTTCGTCCGCCCATAGAAATAA
GTGTTCCCCGCGCCAGCGGAGATAAACCG	GTATCAAAGGTCATCAGGTGTTCGCCTTTCAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GCAGATTGGTATCTGGTACGACGACTGCCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACTGTTAAAATGCTTCAGGACGGTGAAGTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCCACTGTACCGCCGACAGGACTTTTTAACGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGCAGGCGCTGGACGCGCTGCACAGACAGTCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGGTCGAGGTGGCGAGGTTGATAGCAGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGAATATGTTGATCGGGATTCTGGCCGCACTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTTATCGCTCTGAGAGTGGCGCTCGTTACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGCTGACCATGATTGCAGTCAGGGTCGGCAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGAATGATGAAACGAATTAGTAAAAACAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGGCATAGCCACCCCAGACAGTGGCTTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GACCGATCCGGGAACAACCGGAACAACGCGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTAACGCTGGCGTGATAATTTTGGTCGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAATACGACTGGACTGGATTTGATTCATTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGAGCCTGGAGCTCTCGACTCCTGATTTTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTAACGTCCTTTGCTGGTGTTTTTGTGTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACACCAACATTACGGCACGCAAGAGGTTAT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTTGGAGGGCGGTTCTGATGGCGAAACTTATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TACCAACAATTCAGCGTTACGCCAACGGTAAC
GTGTTCCCCGCGCCAACAAGGATAGCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044257.1\|WP_000210451.1\|890756_891557_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP044257.1\|WP_017441121.1\|885997_886771_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP044257.1\|WP_017441119.1\|884453_884990_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP044257.1\|WP_001199961.1\|894938_895610_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP044257.1\|WP_017441125.1\|902586_903321_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP044257.1\|WP_000036734.1\|893504_894803_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP044257.1\|WP_000372384.1\|908990_909899_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP044257.1\|WP_000210863.1\|891784_893422_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP044257.1\|WP_000108313.1\|898201_898564_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP044257.1\|WP_001208007.1\|897314_898112_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP044257.1\|WP_017441124.1\|900798_902511_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP044257.1\|WP_001173663.1\|911334_911940_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP044257.1\|WP_017441128.1\|909908_911348_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP044257.1\|WP_077907220.1\|886783_889483_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP044257.1\|WP_017441120.1\|885471_885978_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP044257.1\|WP_017441127.1\|907693_908740_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP044257.1\|WP_017441126.1\|903533_904487_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP044257.1\|WP_000842512.1\|889562_890150_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP044257.1\|WP_017441123.1\|898999_900799_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP044257.1\|WP_000832396.1\|884986_885457_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179

Protein	Function_ID	Function_description	E-value
NZ_CP044257.1\|WP_000210451.1\|890756_891557_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP044257.1\|WP_017441121.1\|885997_886771_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP044257.1\|WP_017441119.1\|884453_884990_-\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.75281e-120
NZ_CP044257.1\|WP_001199961.1\|894938_895610_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155
NZ_CP044257.1\|WP_017441125.1\|902586_903321_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
NZ_CP044257.1\|WP_000036734.1\|893504_894803_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP044257.1\|WP_000372384.1\|908990_909899_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP044257.1\|WP_000210863.1\|891784_893422_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP044257.1\|WP_000108313.1\|898201_898564_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP044257.1\|WP_001208007.1\|897314_898112_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
NZ_CP044257.1\|WP_017441124.1\|900798_902511_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP044257.1\|WP_001173663.1\|911334_911940_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP044257.1\|WP_017441128.1\|909908_911348_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP044257.1\|WP_077907220.1\|886783_889483_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP044257.1\|WP_017441120.1\|885471_885978_-\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.2915e-104
NZ_CP044257.1\|WP_017441127.1\|907693_908740_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP044257.1\|WP_017441126.1\|903533_904487_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP044257.1\|WP_000842512.1\|889562_890150_-\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	5.36845e-100
NZ_CP044257.1\|WP_017441123.1\|898999_900799_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP044257.1\|WP_000832396.1\|884986_885457_-\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	1.41178e-100

>NZ_CP044257.1|WP_001199961.1|894938_895610_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP044257.1|WP_000036734.1|893504_894803_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP044257.1|WP_000210863.1|891784_893422_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP044257.1|WP_000210451.1|890756_891557_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP044257.1|WP_000842512.1|889562_890150_-|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDTILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP044257.1|WP_077907220.1|886783_889483_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSVSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNSYRSEYNGDKDDGVYISLSVPWGNDSISYNGTFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGSGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPPTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP044257.1|WP_017441121.1|885997_886771_-|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKMTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP044257.1|WP_017441120.1|885471_885978_-|fimbrial-protein
MTMLTRWKMLVLLCGGFVAGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGNNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP044257.1|WP_000832396.1|884986_885457_-|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSANALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP044257.1|WP_017441119.1|884453_884990_-|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVVVTFQGVEDSTLPGLLALEPSSEASGFAIGVETAAQQPVSINATEGTAFVLKEGITTINLQARLQKYAGEDVMPGEFSGTATVSFEYQ
>NZ_CP044257.1|WP_001208007.1|897314_898112_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP044257.1|WP_000108313.1|898201_898564_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP044257.1|WP_017441123.1|898999_900799_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP044257.1|WP_017441124.1|900798_902511_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP044257.1|WP_017441125.1|902586_903321_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP044257.1|WP_017441126.1|903533_904487_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP044257.1|WP_017441127.1|907693_908740_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP044257.1|WP_000372384.1|908990_909899_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP044257.1|WP_017441128.1|909908_911348_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP044257.1|WP_001173663.1|911334_911940_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS

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Crispr_ID: NZ_CP044257_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP044257_2

906980-907679

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

11 spacers

The CRISPR arrays of NZ_CP044257_2

>merge|NZ_CP044257|2|906980-907679|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGTGATTTTAATGATGTGCTGACTACCGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTTCTACAGTAAGGTTTACAGCCTGAGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTACGGAAATTTGTGTCAGATATTGCCGGGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCCACAGTTCGTCGTGAATTGCGCAGGATAGTGTTCCCCGCGCCAGCGGGGATAAACCGGTTCTCAATAAATTTTCCCGGCTGCCGGATCTGTGTTCCCCGCGCCAGCGGGGATAAACCGATTGGGACCATTCCAATGGTCAGTTTCACGGAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACCAGAATTGCTGAAGTAAATTGCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGATATCGAACGGGTTACGGCTGTCGGTGTAACTGTGTTCCCCGCGTCAGCGGGGATAAACCGATATTTTGGCAACTCGTCGTACATTATCGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTCGCACAACGCCTGGATATCCGCCCATCGGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTTTGTGGTAAATATGGAATCGATTAACCCCGTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP044257|2|2|906980-907678|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACC	GATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACA

>NZ_CP044257|2|2|906980-907679|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP044257|2|2|906980-907679|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGTGATTTTAATGATGTGCTGACTACCGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTCTACAGTAAGGTTTACAGCCTGAGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTACGGAAATTTGTGTCAGATATTGCCGGGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGCCCACAGTTCGTCGTGAATTGCGCAGGATA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTTCTCAATAAATTTTCCCGGCTGCCGGATCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTGGGACCATTCCAATGGTCAGTTTCACGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACCAGAATTGCTGAAGTAAATTGCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATCGAACGGGTTACGGCTGTCGGTGTAACT
GTGTTCCCCGCGTCAGCGGGGATAAACCG	ATATTTTGGCAACTCGTCGTACATTATCGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCGCACAACGCCTGGATATCCGCCCATCGGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTTTGTGGTAAATATGGAATCGATTAACCCC
GTGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP044257.1\|WP_000210451.1\|890756_891557_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP044257.1\|WP_001221537.1\|915050_915812_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP044257.1\|WP_017441126.1\|903533_904487_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP044257.1\|WP_017441125.1\|902586_903321_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP044257.1\|WP_000036734.1\|893504_894803_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP044257.1\|WP_000372384.1\|908990_909899_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP044257.1\|WP_000210863.1\|891784_893422_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP044257.1\|WP_000108313.1\|898201_898564_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP044257.1\|WP_001208007.1\|897314_898112_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP044257.1\|WP_017441124.1\|900798_902511_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP044257.1\|WP_000741649.1\|912834_913545_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP044257.1\|WP_001173663.1\|911334_911940_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP044257.1\|WP_017441128.1\|909908_911348_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP044257.1\|WP_017441127.1\|907693_908740_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP044257.1\|WP_000517480.1\|912504_912816_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP044257.1\|WP_001118109.1\|911957_912314_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP044257.1\|WP_001219244.1\|913544_914024_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP044257.1\|WP_000134246.1\|914020_915070_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP044257.1\|WP_017441123.1\|898999_900799_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP044257.1\|WP_001199961.1\|894938_895610_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP044257.1\|WP_000210451.1\|890756_891557_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP044257.1\|WP_001221537.1\|915050_915812_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.64916e-147
NZ_CP044257.1\|WP_017441126.1\|903533_904487_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP044257.1\|WP_017441125.1\|902586_903321_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	3.66931e-138
NZ_CP044257.1\|WP_000036734.1\|893504_894803_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP044257.1\|WP_000372384.1\|908990_909899_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP044257.1\|WP_000210863.1\|891784_893422_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP044257.1\|WP_000108313.1\|898201_898564_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP044257.1\|WP_001208007.1\|897314_898112_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	9.9681e-103
NZ_CP044257.1\|WP_017441124.1\|900798_902511_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP044257.1\|WP_000741649.1\|912834_913545_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.24126e-119
NZ_CP044257.1\|WP_001173663.1\|911334_911940_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP044257.1\|WP_017441128.1\|909908_911348_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP044257.1\|WP_017441127.1\|907693_908740_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP044257.1\|WP_000517480.1\|912504_912816_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP044257.1\|WP_001118109.1\|911957_912314_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP044257.1\|WP_001219244.1\|913544_914024_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.27909e-104
NZ_CP044257.1\|WP_000134246.1\|914020_915070_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP044257.1\|WP_017441123.1\|898999_900799_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP044257.1\|WP_001199961.1\|894938_895610_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155

>NZ_CP044257.1|WP_017441126.1|903533_904487_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDTVIESMSREERQLFLQICEVIGAKMTWHPELLQESISTLRKEVTGNAQIKAAVYEMMRPAEAPDHPLVEWQDSLTEDEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFAEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLV
>NZ_CP044257.1|WP_017441125.1|902586_903321_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAYLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP044257.1|WP_017441124.1|900798_902511_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP044257.1|WP_017441123.1|898999_900799_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLTDTAFAVFGLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNYIHTSPYTKDAPLTATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAEGAEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP044257.1|WP_000108313.1|898201_898564_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP044257.1|WP_001208007.1|897314_898112_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKARPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSREVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEQKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP044257.1|WP_001199961.1|894938_895610_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP044257.1|WP_000036734.1|893504_894803_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP044257.1|WP_000210863.1|891784_893422_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP044257.1|WP_000210451.1|890756_891557_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP044257.1|WP_017441127.1|907693_908740_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGIDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP044257.1|WP_000372384.1|908990_909899_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP044257.1|WP_017441128.1|909908_911348_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLTPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELNERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP044257.1|WP_001173663.1|911334_911940_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP044257.1|WP_001118109.1|911957_912314_+|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP044257.1|WP_000517480.1|912504_912816_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP044257.1|WP_000741649.1|912834_913545_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP044257.1|WP_001219244.1|913544_914024_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP044257.1|WP_000134246.1|914020_915070_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP044257.1|WP_001221537.1|915050_915812_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQIKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP044257_1	1.4\|896120\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896120-896151	32	NZ_CP044257.1	1398642-1398673	1	0.969

1. spacer 1.4|896120|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to position: 1398642-1398673, mismatch: 1, identity: 0.969

gcagattggtatctggtacgacgactgccgcc	CRISPR spacer
gcagattggtatccggtacgacgactgccgcc	Protospacer
*************.******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP044257_2	2.10\|907557\|33\|NZ_CP044257\|PILER-CR	907557-907589	33	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35344-35376	0	1.0
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP044185	Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403	35345-35376	0	1.0
NZ_CP044257_2	2.10\|907557\|33\|NZ_CP044257\|PILER-CR	907557-907589	33	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95163-95195	1	0.97
NZ_CP044257_2	2.10\|907557\|33\|NZ_CP044257\|PILER-CR	907557-907589	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9402-9434	1	0.97
NZ_CP044257_2	2.10\|907557\|33\|NZ_CP044257\|PILER-CR	907557-907589	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39769	1	0.97
NZ_CP044257_2	2.10\|907557\|33\|NZ_CP044257\|PILER-CR	907557-907589	33	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113375-113407	1	0.97
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP029990	Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence	95164-95195	1	0.969
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	9403-9434	1	0.969
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	39737-39768	1	0.969
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP054718	Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence	113376-113407	1	0.969
NZ_CP044257_1	1.11\|896547\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896547-896578	32	NZ_CP009113	Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence	57554-57585	6	0.812
NZ_CP044257_2	2.21\|907558\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907558-907589	32	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	270963-270994	7	0.781
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NC_024970	Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_KJ396772	Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence	189898-189929	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1789627-1789658	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1806317-1806348	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP024986	Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence	51148-51179	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	212687-212718	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	382523-382554	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	212685-212716	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1769551-1769582	8	0.75
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	MN536027	Pseudomonas phage vB_Pae-SS2019XII, complete genome	14176-14207	8	0.75
NZ_CP044257_1	1.19\|897035\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	897035-897066	32	MH622910	Caudovirales sp. isolate ctdb_3, complete genome	4473-4504	8	0.75
NZ_CP044257_1	1.5\|896181\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896181-896212	32	NZ_CP014361	Methylomonas sp. DH-1 plasmid, complete sequence	141473-141504	9	0.719
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP049908	Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence	276209-276240	9	0.719
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP013436	Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence	20088-20119	9	0.719
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP049813	Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence	69714-69745	9	0.719
NZ_CP044257_1	1.11\|896547\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896547-896578	32	MN096355	Mycobacterium phage Purky, complete genome	25716-25747	9	0.719
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	MN694197	Marine virus AFVG_250M303, complete genome	6755-6786	9	0.719
NZ_CP044257_2	2.7\|907374\|33\|NZ_CP044257\|PILER-CR	907374-907406	33	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	63579-63611	9	0.727
NZ_CP044257_2	2.13\|907070\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907070-907101	32	AP018321	Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome	46531-46562	9	0.719
NZ_CP044257_2	2.18\|907375\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907375-907406	32	NZ_CP021643	Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence	63580-63611	9	0.719
NZ_CP044257_2	2.18\|907375\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907375-907406	32	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2378875-2378906	9	0.719
NZ_CP044257_1	1.7\|896303\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896303-896334	32	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	171558-171589	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119175	Helicobacter phage Pt22899G, complete genome	5088-5119	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119175	Helicobacter phage Pt22899G, complete genome	16950-16981	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	JF734911	Helicobacter phage phiHP33, complete genome	19807-19838	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119200	Helicobacter phage FrMEG235U, complete genome	14594-14625	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119200	Helicobacter phage FrMEG235U, complete genome	19690-19721	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119201	Helicobacter phage FrANT170U, complete genome	14594-14625	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119201	Helicobacter phage FrANT170U, complete genome	19690-19721	10	0.688
NZ_CP044257_1	1.12\|896608\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896608-896639	32	KX119179	Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds	1261-1292	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP031899	Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence	76272-76303	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_KM085450	Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence	141990-142021	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP009107	Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence	141989-142020	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP028382	Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence	155197-155228	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027343	Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence	103401-103432	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027311	Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence	50904-50935	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027441	Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence	97903-97934	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027585	Escherichia coli strain 00-3076 plasmid unnamed, complete sequence	13352-13383	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027370	Escherichia coli strain 2014C-3307 plasmid unnamed2	109572-109603	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027453	Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence	79387-79418	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027451	Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence	10648-10679	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP027372	Escherichia coli strain 2015C-3905 plasmid unnamed	102888-102919	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP028121	Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence	49990-50021	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NC_007365	Escherichia coli EH41 plasmid pO113, complete sequence	160071-160102	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP023542	Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence	141994-142025	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP010192	Escherichia coli strain M8 plasmid A, complete genome	74522-74553	10	0.688
NZ_CP044257_1	1.14\|896730\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896730-896761	32	NZ_CP023164	Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence	35202-35233	10	0.688
NZ_CP044257_1	1.19\|897035\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	897035-897066	32	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1409535-1409566	10	0.688
NZ_CP044257_2	2.7\|907374\|33\|NZ_CP044257\|PILER-CR	907374-907406	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2378874-2378906	10	0.697
NZ_CP044257_2	2.13\|907070\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907070-907101	32	MG592456	Vibrio phage 1.081.O._10N.286.52.C2, partial genome	229928-229959	10	0.688
NZ_CP044257_2	2.19\|907436\|32\|NZ_CP044257\|CRISPRCasFinder,CRT	907436-907467	32	NZ_CP042332	Bosea sp. F3-2 plasmid pB32-1, complete sequence	318607-318638	10	0.688
NZ_CP044257_1	1.15\|896791\|32\|NZ_CP044257\|PILER-CR,CRISPRCasFinder,CRT	896791-896822	32	NZ_CP015094	Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence	53594-53625	11	0.656

1. spacer 2.10|907557|33|NZ_CP044257|PILER-CR matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatatccgcccatcggcc	Protospacer
*********************************

2. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP044185 (Salmonella enterica subsp. enterica strain AR-0403 plasmid pAR-0403) position: , mismatch: 0, identity: 1.0

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatatccgcccatcggcc	Protospacer
********************************

3. spacer 2.10|907557|33|NZ_CP044257|PILER-CR matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

4. spacer 2.10|907557|33|NZ_CP044257|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

5. spacer 2.10|907557|33|NZ_CP044257|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

6. spacer 2.10|907557|33|NZ_CP044257|PILER-CR matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.97

gtcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
gtcgcacaacgcctggatattcgcccatcggcc	Protospacer
********************.************

7. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

8. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

9. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

10. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP054718 (Salmonella enterica strain 85-0120 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgcacaacgcctggatattcgcccatcggcc	Protospacer
*******************.************

11. spacer 1.11|896547|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009113 (Rhodococcus opacus strain 1CP plasmid pR1CP2, complete sequence) position: , mismatch: 6, identity: 0.812

gcgctgaccatgattgcagtcagg--gtcggcat	CRISPR spacer
tcgctgaccatgattgcagccgggtcgtcggg--	Protospacer
 ******************.*.**  *****

12. spacer 2.21|907558|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP040720 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tcgcacaacgcctggatatccgcccatcggcc	CRISPR spacer
tcgagaaacgcctggatctccgcccaccgccg	Protospacer
*** . *********** ********.** *

13. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

14. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

15. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

16. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

17. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc--	CRISPR spacer
cgcgggcgctcgacgcgctgcac--gtggccctg	Protospacer
***.****** ************  ...*.**

18. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

19. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc----	CRISPR spacer
cgcaggcgctggccgagctgc----acgatccagag	Protospacer
************ ** *****    **..***

20. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

21. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcagtcgctcgacgcgctgcaccgcgtggcg	Protospacer
***** **** ************ *   * *

22. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to MN536027 (Pseudomonas phage vB_Pae-SS2019XII, complete genome) position: , mismatch: 8, identity: 0.75

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
tccaggcgctggaggcgctgcgcagcaagagc	Protospacer
. *********** *******.***  **  *

23. spacer 1.19|897035|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to MH622910 (Caudovirales sp. isolate ctdb_3, complete genome) position: , mismatch: 8, identity: 0.75

---aaacaccaacattacggcacgcaagaggttat	CRISPR spacer
ttcaagcgtcag---tacggcacgcaagaagttat	Protospacer
   **.*..**.   **************.*****

24. spacer 1.5|896181|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014361 (Methylomonas sp. DH-1 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

actgttaaaatgcttcaggacggtgaagtaaa	CRISPR spacer
caagcgaaaatgcttcaggatggtgaaatatg	Protospacer
   *. **************.******.** .

25. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049908 (Hymenobacter sp. HDW8 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcgggcgctggacgcgccgcacaagaccttt	Protospacer
***.**************.*****..   *..

26. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013436 (Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
cgcaggcgctggagacgctgcacgatcgaaca	Protospacer
************* .********.. *.. *

27. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
tgcaggccctgaacgcgctgcacatctatcac	Protospacer
.****** ***.************  .* . *

28. spacer 1.11|896547|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to MN096355 (Mycobacterium phage Purky, complete genome) position: , mismatch: 9, identity: 0.719

gcgctgaccatgattgcagtcagggtcggcat	CRISPR spacer
ctggctgccatgatcgcagtcatggtcggcct	Protospacer
 .* . .*******.******* ******* *

29. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to MN694197 (Marine virus AFVG_250M303, complete genome) position: , mismatch: 9, identity: 0.719

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
aatagggaatgaaacgtattagtaaaaacaaa	Protospacer
.. ... .******** ***************

30. spacer 2.7|907374|33|NZ_CP044257|PILER-CR matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.727

gaaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
gaaacaagatttgctgaagtaaatttagcattt	Protospacer
***** *** ***************  . *

31. spacer 2.13|907070|32|NZ_CP044257|CRISPRCasFinder,CRT matches to AP018321 (Nostoc sp. HK-01 plasmid plasmid3 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcgttctacagtaaggtttacagcctgagcaa	CRISPR spacer
tgcctattcagtaagggttacagccttagcat	Protospacer
   .* * ******** ********* ****

32. spacer 2.18|907375|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP021643 (Campylobacter concisus strain P2CDO4 plasmid pICON, complete sequence) position: , mismatch: 9, identity: 0.719

aaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
aaacaagatttgctgaagtaaatttagcattt	Protospacer
**** *** ***************  . *

33. spacer 2.18|907375|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

aaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
acgggcgaattgctgaaggaaatcgcaaaaat	Protospacer
* .   ************ ****.******.

34. spacer 1.7|896303|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaggcgctggacgcgctgcacagacagtcc	CRISPR spacer
gtcaggcgctgcacgccctgcacagccgcgag	Protospacer
  ********* **** ******** *.

35. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

36. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119175 (Helicobacter phage Pt22899G, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

37. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to JF734911 (Helicobacter phage phiHP33, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

38. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

39. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119200 (Helicobacter phage FrMEG235U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

40. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

41. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119201 (Helicobacter phage FrANT170U, complete genome) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

42. spacer 1.12|896608|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to KX119179 (Helicobacter phage Pt5303G mobile element protein and transposase genes, complete cds) position: , mismatch: 10, identity: 0.688

ggggaatgatgaaacgaattagtaaaaacaaa	CRISPR spacer
tgcctttgattaaacgacttagtaaaaacctt	Protospacer
 *    **** ****** ***********

43. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031899 (Escherichia coli O113:H21 strain FWSEC0010 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

44. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KM085450 (Escherichia coli O104:H21 strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

45. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009107 (Escherichia coli strain 94-3024 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

46. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028382 (Escherichia coli strain RM10466 plasmid pRM10466-1, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

47. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027343 (Escherichia coli strain 2014C-4587 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

48. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027311 (Escherichia coli strain 2014C-4135 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

49. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027441 (Escherichia coli strain 2012C-4502 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

50. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027585 (Escherichia coli strain 00-3076 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

51. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027370 (Escherichia coli strain 2014C-3307 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

52. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027453 (Escherichia coli strain 2014C-3338 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

53. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027451 (Escherichia coli strain 2014C-3097 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

54. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027372 (Escherichia coli strain 2015C-3905 plasmid unnamed) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

55. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028121 (Escherichia coli O43 str. RM10042 plasmid pRM10042-2, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

56. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NC_007365 (Escherichia coli EH41 plasmid pO113, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

57. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023542 (Escherichia coli O104:H21 str. CFSAN002236 strain ATCC BAA-178 plasmid pO104_H21, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

58. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010192 (Escherichia coli strain M8 plasmid A, complete genome) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

59. spacer 1.14|896730|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023164 (Escherichia coli O22:H8 strain RM10809-3 plasmid pRM10809-3, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgatccgggaacaaccggaacaacgcggg	CRISPR spacer
acaataaaagggaacaacctgaacaacgccgg	Protospacer
.    *   ********** ********* **

60. spacer 1.19|897035|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aaacaccaacattacggcacgcaagaggttat	CRISPR spacer
gctcaccgacattacggcgcgcaagaaggcgg	Protospacer
.  ****.**********.*******.* ..

61. spacer 2.7|907374|33|NZ_CP044257|PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

gaaaccagaattgctgaagtaaattgcaaaaga	CRISPR spacer
aacgggcgaattgctgaaggaaatcgcaaaaat	Protospacer
.* .   ************ ****.******.

62. spacer 2.13|907070|32|NZ_CP044257|CRISPRCasFinder,CRT matches to MG592456 (Vibrio phage 1.081.O._10N.286.52.C2, partial genome) position: , mismatch: 10, identity: 0.688

gcgttctacagtaaggtttacagcctgagcaa	CRISPR spacer
gaacggctgagtaacgttaacagcctgagcaa	Protospacer
* ..  .  ***** *** *************

63. spacer 2.19|907436|32|NZ_CP044257|CRISPRCasFinder,CRT matches to NZ_CP042332 (Bosea sp. F3-2 plasmid pB32-1, complete sequence) position: , mismatch: 10, identity: 0.688

atatcgaacgggttacggctgtcggtgtaact	CRISPR spacer
tgaccgaccgggtaacggctgtcggtggcgac	Protospacer
  *.*** ***** *************  . .

64. spacer 1.15|896791|32|NZ_CP044257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015094 (Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence) position: , mismatch: 11, identity: 0.656

ccagtaacgctggcgtgataattttggtcgcc	CRISPR spacer
aagaagccgccggcgtgataattctggtcgat	Protospacer
  .. . ***.************.****** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1011974 : 1124608

114

Salmonella_phage(62.07%)

tail,tRNA,integrase,lysis,capsid,transposase,portal,terminase,plate,head

attL 1093751:1093795|attR 1120823:1120867

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017441156.1\|1011974_1014605_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.5e-79	38.3
WP_000906486.1\|1014839_1015025_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_000271296.1\|1016165_1016732_+	fructose-1-phosphate/6-phosphogluconate phosphatase	M1I5S4	Acanthocystis_turfacea_Chlorella_virus	7.2e-14	27.6
WP_017441157.1\|1016728_1017154_+	DedA family protein	NA	NA	NA	NA
WP_000611821.1\|1017230_1018787_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_001130193.1\|1018936_1019452_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_017441158.1\|1019797_1021168_+	carbohydrate porin	NA	NA	NA	NA
WP_001187297.1\|1021216_1022755_-	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_017441159.1\|1022771_1023944_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
WP_000378431.1\|1024070_1024601_-	transcriptional repressor MprA	NA	NA	NA	NA
WP_000165769.1\|1025097_1026282_-	MFS transporter	NA	NA	NA	NA
WP_001216613.1\|1026446_1027442_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_000775022.1\|1027511_1028576_-	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_000985529.1\|1028568_1029771_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	1.4e-27	38.8
WP_000777901.1\|1030125_1031085_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	1.8e-129	71.8
WP_017441160.1\|1031095_1033240_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	8.4e-196	48.6
WP_001275401.1\|1033212_1033623_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	3.3e-16	41.8
WP_000028870.1\|1033619_1033865_-	glutaredoxin-like protein NrdH	NA	NA	NA	NA
WP_072103493.1\|1033963_1034140_-	hypothetical protein	NA	NA	NA	NA
WP_000209808.1\|1034136_1034568_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017441161.1\|1034656_1035991_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_001519557.1\|1036074_1036401_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_000281304.1\|1036562_1036913_+	YgaC family protein	NA	NA	NA	NA
WP_000492669.1\|1036947_1037397_-	L-alanine exporter AlaE	NA	NA	NA	NA
WP_001051100.1\|1038295_1038697_+	DNA-binding protein StpA	NA	NA	NA	NA
WP_000494943.1\|1038786_1038966_-	hypothetical protein	NA	NA	NA	NA
WP_000022011.1\|1039044_1039572_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_017441162.1\|1039581_1039881_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000508175.1\|1040063_1040222_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_000522406.1\|1040321_1040771_+	peptidoglycan-binding protein LysM	A0A090DBR9	Clostridium_phage	7.5e-06	38.2
WP_000126152.1\|1040792_1041470_-	DNA-binding transcriptional regulator CsiR	NA	NA	NA	NA
WP_000531282.1\|1041511_1042912_-	GABA permease	NA	NA	NA	NA
WP_017441163.1\|1043042_1044326_-	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	7.9e-32	31.1
WP_001176523.1\|1044340_1045789_-	NADP-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_017441164.1\|1045810_1047079_-	L-2-hydroxyglutarate oxidase	NA	NA	NA	NA
WP_151122849.1\|1047104_1048091_-	carbon starvation induced protein CsiD	NA	NA	NA	NA
WP_017441165.1\|1048384_1049899_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_001574835.1\|1049909_1050344_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_000744413.1\|1050355_1051333_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_001237934.1\|1051487_1052162_+	transcriptional regulator TctD	NA	NA	NA	NA
WP_000872338.1\|1052148_1053564_+	sensor histidine kinase	NA	NA	NA	NA
WP_017441166.1\|1053696_1054710_+	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA
WP_000701504.1\|1055431_1056328_-	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
WP_000178739.1\|1056621_1057551_-	VirK family antimicrobial peptide resistance protein	NA	NA	NA	NA
WP_023242670.1\|1058068_1059121_+	type III secretion system effector PipB2	NA	NA	NA	NA
WP_077907224.1\|1059294_1059627_+	hypothetical protein	NA	NA	NA	NA
WP_031615615.1\|1060151_1062332_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_000274361.1\|1062373_1063309_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_017441169.1\|1063340_1064585_-	esterase family protein	NA	NA	NA	NA
WP_017441170.1\|1064694_1068351_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.3e-44	28.4
WP_017441171.1\|1068431_1069547_-	salmochelin biosynthesis C-glycosyltransferase IroB	NA	NA	NA	NA
WP_151122853.1\|1070119_1071211_-\|tail	phage tail protein	M1TAS6	Escherichia_phage	8.4e-152	79.1
WP_001086836.1\|1071207_1071813_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.5e-110	92.5
WP_000268285.1\|1071805_1072714_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	1.2e-143	90.7
WP_000177580.1\|1072700_1073060_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	3.2e-52	87.4
WP_000993777.1\|1073056_1073635_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	4.7e-93	85.9
WP_000829123.1\|1074265_1074718_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	9.4e-57	79.5
WP_001039945.1\|1074710_1075142_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	4.4e-72	94.4
WP_000196196.1\|1075237_1075666_-\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.8e-57	89.4
WP_077908404.1\|1075662_1076139_-	lysozyme	E5G6N1	Salmonella_phage	2.6e-81	91.1
WP_000171568.1\|1076158_1076374_-	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_000868175.1\|1076377_1076581_-\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000673520.1\|1076580_1077045_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
WP_000059203.1\|1077140_1077791_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	1.6e-110	94.9
WP_000742498.1\|1077794_1078853_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000216222.1\|1078869_1079703_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	7.9e-118	88.8
WP_001098431.1\|1079845_1081612_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_000520352.1\|1081611_1082646_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.8e-173	89.2
WP_000245245.1\|1082654_1083353_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_000366628.1\|1083642_1084254_-	hypothetical protein	NA	NA	NA	NA
WP_000516592.1\|1084302_1084563_-	hypothetical protein	J9Q7T5	Salmonella_phage	5.8e-19	62.2
WP_001217566.1\|1084636_1084870_-	DinI family protein	A0A0M4S6H1	Salmonella_phage	3.7e-33	92.2
WP_001154434.1\|1084880_1085069_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_024140583.1\|1085221_1087636_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
WP_000104156.1\|1087632_1088490_-	DNA adenine methylase	E5G6L8	Salmonella_phage	7.1e-162	97.9
WP_000752613.1\|1088486_1088714_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	2.7e-36	100.0
WP_001244228.1\|1088713_1088947_-	DUF2732 family protein	E5G6L6	Salmonella_phage	6.4e-33	98.7
WP_000963473.1\|1089014_1089356_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_000956182.1\|1089319_1089520_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	7.1e-33	98.5
WP_000460857.1\|1089527_1090037_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	3.5e-84	96.4
WP_000063849.1\|1090069_1090318_-	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	3.4e-24	71.6
WP_000616876.1\|1090437_1091070_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	8.1e-107	91.0
WP_006666820.1\|1091071_1092085_+\|integrase	site-specific integrase	E5G6L0	Salmonella_phage	7.7e-192	95.5
WP_000615103.1\|1092097_1093618_+	hypothetical protein	NA	NA	NA	NA
1093751:1093795	attL	NA	NA	NA	NA
WP_023242842.1\|1093960_1095190_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	1.0e-214	89.2
WP_023242843.1\|1095537_1096950_-	hypothetical protein	NA	NA	NA	NA
WP_017442269.1\|1097024_1098146_-	N-6 DNA methylase	NA	NA	NA	NA
WP_024156456.1\|1098223_1099924_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_023242845.1\|1099935_1100778_+	hypothetical protein	NA	NA	NA	NA
WP_023242846.1\|1100850_1101315_+	hypothetical protein	NA	NA	NA	NA
WP_129369178.1\|1101327_1101528_-	hypothetical protein	NA	NA	NA	NA
WP_093976750.1\|1101937_1103048_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.4e-06	25.0
WP_086016394.1\|1103028_1104119_-\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.7e-141	87.7
WP_017442260.1\|1104550_1104778_+	hypothetical protein	NA	NA	NA	NA
WP_017442261.1\|1104808_1105768_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_061341684.1\|1105817_1106657_+	nucleotide-binding protein	NA	NA	NA	NA
WP_000388871.1\|1107281_1107821_-	phase 1 flagellin gene repressor FljA	NA	NA	NA	NA
WP_024137368.1\|1107888_1109394_-	flagellin FliC	NA	NA	NA	NA
WP_000190908.1\|1109485_1110052_+	flagellar phase variation DNA invertase Hin	A0A0A7NPV4	Enterobacteria_phage	3.5e-69	73.2
WP_151122856.1\|1110763_1111204_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	5.8e-51	66.7
WP_006673255.1\|1111175_1111778_-\|tail	tail fiber assembly protein	M1SV83	Escherichia_phage	6.6e-98	90.0
WP_050498778.1\|1111777_1112329_-\|tail	tail fiber protein	Q9MCR6	Enterobacteria_phage	8.8e-57	67.1
WP_000905033.1\|1112356_1112923_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	3.8e-87	86.8
WP_000046133.1\|1113065_1114238_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-203	90.0
WP_001207660.1\|1114247_1114763_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_001281009.1\|1114817_1115120_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_000763311.1\|1115134_1115254_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_006674729.1\|1115246_1118324_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	69.3
WP_000980400.1\|1118320_1118806_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.8e-67	80.6
WP_151122859.1\|1118802_1119903_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	6.5e-176	88.5
WP_000980502.1\|1119971_1120190_+	hypothetical protein	Q53ZE7	Salmonella_virus	2.2e-27	76.4
WP_000391796.1\|1120216_1120699_-	hypothetical protein	Q19UP0	Mannheimia_phage	4.6e-17	34.3
WP_072101449.1\|1121256_1122420_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
1120823:1120867	attR	NA	NA	NA	NA
WP_017442216.1\|1122427_1124608_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	1.3e-18	34.0

DBSCAN-SWA_2

1413093 : 1454913

Salmonella_phage(66.07%)

coat,integrase,portal

attL 1432357:1432373|attR 1455195:1455211

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017441412.1\|1413093_1413297_-	excisionase	C6ZR24	Salmonella_phage	4.7e-32	95.5
WP_024137319.1\|1413393_1414029_-	hypothetical protein	A0A075B8I7	Enterobacteria_phage	6.3e-107	88.2
WP_017441413.1\|1414273_1414540_-	hypothetical protein	A0A1V0E5L9	Salmonella_phage	1.1e-44	96.6
WP_017441415.1\|1415511_1415769_-	hypothetical protein	A0A192Y5W0	Salmonella_phage	5.9e-40	95.3
WP_023242786.1\|1415770_1416538_-	ead/Ea22-like family protein	A0A075B8K3	Enterobacteria_phage	1.3e-69	60.1
WP_023242787.1\|1416534_1416780_-	hypothetical protein	A0A1V0E5L1	Salmonella_phage	1.0e-33	92.3
WP_010835575.1\|1416776_1417007_-	hypothetical protein	G8C7U9	Escherichia_phage	5.5e-29	89.3
WP_023242788.1\|1417003_1417501_-	hypothetical protein	A0A0N6WGF1	Salmonella_phage	3.5e-73	82.4
WP_001214770.1\|1417497_1417668_-	DUF2737 family protein	I6S642	Salmonella_phage	6.1e-25	100.0
WP_001111292.1\|1417678_1417972_-	DUF2856 family protein	Q76H42	Enterobacteria_phage	8.8e-48	97.9
WP_001253476.1\|1418018_1418303_-	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_023242790.1\|1418302_1419010_-	recombination protein	K7PKU3	Enterobacteria_phage	1.3e-116	86.4
WP_001181693.1\|1419293_1419488_-	hypothetical protein	NA	NA	NA	NA
WP_023242791.1\|1419472_1419607_-	hypothetical protein	K7PHK2	Enterobacteria_phage	2.1e-09	78.0
WP_000401881.1\|1419692_1419947_-	hypothetical protein	NA	NA	NA	NA
WP_023242793.1\|1420106_1420577_-	hypothetical protein	A0A1I9LJN4	Stx_converting_phage	3.1e-87	98.7
WP_039584552.1\|1420585_1420918_-	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	2.5e-51	95.5
WP_000856895.1\|1421285_1421948_-	LexA family transcriptional regulator	A0A0M4QWY1	Salmonella_phage	1.8e-125	99.1
WP_000067726.1\|1422066_1422282_+	helix-turn-helix transcriptional regulator	A0A0M4RTV8	Salmonella_phage	4.1e-34	100.0
WP_000424166.1\|1422389_1422668_+	transcriptional regulator	A0A220NRS4	Escherichia_phage	2.2e-40	93.5
WP_023233620.1\|1422850_1423699_+	replication protein	C6ZR51	Salmonella_phage	8.0e-150	94.7
WP_151122862.1\|1423806_1425687_+	bifunctional DNA primase/helicase	I6S1U6	Salmonella_phage	0.0e+00	98.7
WP_001064628.1\|1425687_1425966_+	hypothetical protein	C6ZR54	Salmonella_phage	5.2e-50	100.0
WP_000736922.1\|1426039_1426477_+	recombination protein NinB	C6ZR55	Salmonella_phage	7.7e-80	100.0
WP_000679702.1\|1426473_1426647_+	hypothetical protein	C6ZR56	Salmonella_phage	5.2e-32	100.0
WP_000113764.1\|1426613_1426790_+	NinE family protein	I6RSI9	Salmonella_phage	4.3e-26	96.6
WP_000566853.1\|1426786_1426963_+	protein ninF	A0A0M4S6T3	Salmonella_phage	1.0e-27	96.6
WP_001014910.1\|1427218_1427614_+	RusA family crossover junction endodeoxyribonuclease	A0A0M4REJ2	Salmonella_phage	1.4e-69	96.9
WP_000149926.1\|1427610_1427814_+	protein ninH	Q5G8R8	Enterobacteria_phage	7.2e-33	100.0
WP_000219138.1\|1427794_1427974_+	hypothetical protein	A0A1V0E5I7	Salmonella_phage	7.1e-24	100.0
WP_001235465.1\|1427970_1428594_+	antitermination protein	C6ZR62	Salmonella_phage	1.5e-113	99.0
WP_017441426.1\|1428867_1429065_+	hypothetical protein	NA	NA	NA	NA
WP_024133454.1\|1429311_1429539_+	hypothetical protein	NA	NA	NA	NA
WP_023994440.1\|1429513_1429981_+	glycoside hydrolase family protein	H9C148	Vibrio_phage	2.5e-28	45.8
WP_000182933.1\|1430204_1430492_+	hypothetical protein	NA	NA	NA	NA
WP_023994441.1\|1430858_1431380_+	DNA-binding protein	H6WRZ8	Salmonella_phage	1.8e-99	98.3
WP_017441429.1\|1431726_1432107_+	hypothetical protein	Q716B1	Shigella_phage	1.0e-64	97.6
WP_000807793.1\|1432210_1432453_+	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
1432357:1432373	attL	NA	NA	NA	NA
WP_017441430.1\|1432455_1432860_+	hypothetical protein	C6ZR73	Salmonella_phage	1.5e-66	99.3
WP_000729924.1\|1432863_1433352_+	hypothetical protein	A8CGG1	Salmonella_phage	2.9e-88	100.0
WP_017441431.1\|1433329_1434829_+	DNA packaging protein	A0A0M4S5Z3	Salmonella_phage	3.1e-306	99.6
WP_151122865.1\|1434828_1437006_+\|portal	portal protein	I6R968	Salmonella_phage	0.0e+00	98.3
WP_044128237.1\|1437019_1437931_+	scaffolding protein	A0A1R3Y5R6	Salmonella_virus	1.1e-160	99.7
WP_044128239.1\|1437930_1439223_+\|coat	coat protein	C6ZR10	Salmonella_phage	1.9e-243	99.5
WP_010835894.1\|1439261_1439471_+	hypothetical protein	I1TEI9	Salmonella_phage	2.8e-32	100.0
WP_080084958.1\|1439454_1439955_+	hypothetical protein	I1TEJ0	Salmonella_phage	6.7e-88	98.2
WP_023198766.1\|1439914_1441333_+	hypothetical protein	I1TEJ1	Salmonella_phage	1.5e-273	98.9
WP_023198767.1\|1441336_1442038_+	hypothetical protein	C6ZR14	Salmonella_phage	4.0e-70	93.1
WP_050068186.1\|1442037_1442493_+	DUF2824 family protein	A0A1R3Y5P3	Salmonella_virus	2.0e-86	98.7
WP_050068187.1\|1442495_1443191_+	hypothetical protein	A0A2H4FUQ9	Salmonella_phage	2.2e-113	96.9
WP_079959335.1\|1443201_1444551_+	phage DNA ejection protein	A0A0M5M1J8	Salmonella_phage	3.1e-172	70.2
WP_151122868.1\|1444535_1446704_+	hypothetical protein	A0A0A0P1R1	Enterobacteria_phage	8.6e-47	28.6
WP_022630937.1\|1446749_1447049_-	hypothetical protein	NA	NA	NA	NA
WP_071653511.1\|1447074_1447260_+	hypothetical protein	I6RSG3	Salmonella_phage	4.3e-08	96.7
WP_001036008.1\|1447234_1447444_-	hypothetical protein	I6R975	Salmonella_phage	1.7e-29	97.1
WP_001283827.1\|1447440_1447692_-	Arc family DNA-binding protein	A5VW59	Enterobacteria_phage	1.2e-34	95.1
WP_071653510.1\|1447797_1447938_+	Arc family DNA-binding protein	A0A0M4S6R9	Salmonella_phage	4.4e-05	59.1
WP_079959333.1\|1448036_1448960_+	phage antirepressor Ant	A5VW58	Enterobacteria_phage	1.5e-173	97.1
WP_080201808.1\|1449060_1450848_+	hypothetical protein	I6S5Y0	Salmonella_phage	1.2e-57	86.7
WP_024137322.1\|1450879_1452334_-	hypothetical protein	NA	NA	NA	NA
WP_023138703.1\|1452323_1453250_-	glycosyltransferase family 2 protein	I1TED8	Salmonella_phage	2.2e-161	92.8
WP_023138702.1\|1453246_1453609_-	GtrA family protein	I1TED9	Salmonella_phage	6.2e-51	82.5
WP_151122871.1\|1453743_1454913_-\|integrase	tyrosine-type recombinase/integrase	I6R0M2	Salmonella_phage	7.7e-228	99.0
1455195:1455211	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1697429 : 1706600

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017441997.1\|1697429_1698377_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.7e-10	27.0
WP_000824854.1\|1698360_1699092_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1699072_1699180_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1699239_1699971_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272850.1\|1700193_1701879_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_000598637.1\|1701875_1702595_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_017441996.1\|1702641_1703109_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.0e-74	90.3
WP_017441995.1\|1703165_1703696_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703137.1\|1703867_1704326_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_000195334.1\|1704566_1706600_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_4

1879383 : 1886615

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000394197.1\|1879383_1879803_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_017441837.1\|1879805_1881074_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.9e-227	92.2
WP_000208509.1\|1881519_1881732_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|1881742_1881931_+	hypothetical protein	NA	NA	NA	NA
WP_017441838.1\|1882190_1883375_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	5.1e-110	57.1
WP_000107435.1\|1884024_1884336_+	hypothetical protein	NA	NA	NA	NA
WP_017441839.1\|1884415_1885111_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_017441840.1\|1885184_1886615_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_5

4315134 : 4362781

Burkholderia_phage(36.36%)

tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001825318.1\|4315134_4316133_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039335.1\|4316220_4317531_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_017441254.1\|4317777_4318293_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4318391_4318601_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4318622_4318736_-	hypothetical protein	NA	NA	NA	NA
WP_001128113.1\|4318732_4320058_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4320236_4320845_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4320953_4321322_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017360.1\|4321492_4323913_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4324011_4324884_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_017441255.1\|4324897_4325395_-	chorismate lyase	NA	NA	NA	NA
WP_000782497.1\|4325575_4326493_-	maltose operon protein MalM	NA	NA	NA	NA
WP_001594897.1\|4326656_4328012_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4328100_4329210_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_001651229.1\|4329571_4330762_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4330893_4332438_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252081.1\|4332452_4333343_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982752.1\|4333508_4333919_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750805.1\|4334061_4336158_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_017441256.1\|4336157_4336895_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_122821798.1\|4336891_4337560_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4337593_4337836_-	outer membrane protein	NA	NA	NA	NA
WP_000790025.1\|4338279_4339929_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136392.1\|4340317_4341667_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_001651225.1\|4341801_4342149_-	hypothetical protein	Q6QIE8	Burkholderia_phage	7.5e-22	52.6
WP_001226440.1\|4342725_4343013_+	membrane protein	Q6QIC8	Burkholderia_phage	5.1e-16	48.1
WP_017441257.1\|4343015_4343621_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	1.0e-58	58.8
WP_000777266.1\|4343633_4343948_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_017441258.1\|4344107_4344563_+	hypothetical protein	NA	NA	NA	NA
WP_000875313.1\|4344559_4344757_+	hypothetical protein	Q6QIB1	Burkholderia_phage	5.1e-07	52.9
WP_017441259.1\|4344746_4346174_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.8e-194	71.2
WP_017441260.1\|4346173_4346698_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	1.8e-67	69.0
WP_001003641.1\|4346749_4347067_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4347026_4347155_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_017441261.1\|4347251_4349606_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	3.4e-65	30.5
WP_017441262.1\|4349605_4350559_+	hypothetical protein	A4JWL1	Burkholderia_virus	7.9e-37	51.5
WP_001269716.1\|4350558_4350768_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_017441263.1\|4350755_4351799_+	phage late control D family protein	A4JWL3	Burkholderia_virus	1.5e-76	45.6
WP_000679395.1\|4351808_4352531_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.9e-12	42.0
WP_000593184.1\|4352857_4353220_+	GtrA family protein	U5P0S6	Shigella_phage	9.6e-44	70.8
WP_000703634.1\|4353216_4354146_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	6.7e-150	83.8
WP_017441264.1\|4354145_4355693_+	hypothetical protein	B9UDL6	Salmonella_phage	5.0e-49	30.4
WP_001093501.1\|4355856_4356216_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_017441265.1\|4356206_4357322_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	3.1e-101	52.7
WP_000359502.1\|4357314_4357947_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	1.1e-23	56.4
WP_017441266.1\|4357949_4359608_+\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	8.0e-53	52.7
WP_017441267.1\|4359614_4360229_+	DUF4376 domain-containing protein	NA	NA	NA	NA
WP_017441268.1\|4360225_4360681_+	hypothetical protein	NA	NA	NA	NA
WP_024142925.1\|4361057_4361474_+	serine acetyltransferase	NA	NA	NA	NA
WP_000587738.1\|4362052_4362781_+	hypothetical protein	A0A077SLK3	Escherichia_phage	5.6e-35	37.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP044256

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 1037

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000149862.1\|773_1037_+	hypothetical protein	M9UXL5	Escherichia_phage	3.2e-09	46.5

DBSCAN-SWA_2

6255 : 7311

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031275323.1\|6255_7311_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	2.1e-83	50.9

DBSCAN-SWA_3

12909 : 21629

Salmonella_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000096325.1\|12909_14601_-	DUF4942 domain-containing protein	J9Q747	Salmonella_phage	5.8e-67	31.1
WP_000114860.1\|14848_16012_-	hypothetical protein	A0A1P8DTT7	Salmonella_phage	1.3e-17	32.1
WP_001121574.1\|16381_17194_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.2e-46	38.9
WP_000970401.1\|17202_18057_-	hypothetical protein	NA	NA	NA	NA
WP_000838219.1\|18291_19008_-	hypothetical protein	NA	NA	NA	NA
WP_000594930.1\|19004_19205_-	hypothetical protein	NA	NA	NA	NA
WP_001065778.1\|19224_20277_-	hypothetical protein	A0A2P9HXK7	Yersinia_phage	1.1e-12	31.2
WP_000594611.1\|20753_21629_+	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	7.9e-60	42.7

DBSCAN-SWA_4

37477 : 38482

Aeromonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278838.1\|37477_38482_+	ParB N-terminal domain-containing protein	A0A1I9KFW9	Aeromonas_phage	2.7e-11	33.8

DBSCAN-SWA_5

41587 : 42625

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000818954.1\|41587_42625_+	hypothetical protein	A0A0A7NPX4	Enterobacteria_phage	3.6e-43	35.0

DBSCAN-SWA_6

57307 : 59092

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151122800.1\|57307_59092_+	AAA family ATPase	G3MA40	Bacillus_virus	1.3e-21	23.1

DBSCAN-SWA_7

78824 : 121316

Escherichia_phage(25.0%)

protease,integrase,transposase

attL 77127:77140|attR 95039:95052

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
77127:77140	attL	NA	NA	NA	NA
WP_000795949.1\|78824_80000_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001285422.1\|80169_80382_+	hypothetical protein	NA	NA	NA	NA
WP_001232447.1\|80742_81825_+	hypothetical protein	NA	NA	NA	NA
WP_001284315.1\|81990_83490_-	kinase	NA	NA	NA	NA
WP_000081059.1\|83515_85153_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_001253656.1\|85152_86193_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001253658.1\|86277_86916_-	VWA domain-containing protein	NA	NA	NA	NA
WP_000116681.1\|86915_87557_-	TerD family protein	NA	NA	NA	NA
WP_001253657.1\|87579_88218_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|88680_89148_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_011152964.1\|89165_90374_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_011152965.1\|90384_91341_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_001585166.1\|91340_92420_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
WP_001040058.1\|92421_93195_-	hypothetical protein	NA	NA	NA	NA
WP_001280115.1\|93187_94330_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	6.5e-30	34.5
WP_012477371.1\|94339_95398_-	hypothetical protein	NA	NA	NA	NA
95039:95052	attR	NA	NA	NA	NA
WP_000254137.1\|95718_96300_+	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_001054786.1\|96299_97457_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_151122812.1\|97479_97935_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000255079.1\|97957_98998_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116680.1\|99046_99625_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	2.5e-06	40.0
WP_000301247.1\|99693_100269_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053340.1\|100697_101939_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000374058.1\|102029_102485_+	hypothetical protein	NA	NA	NA	NA
WP_000398479.1\|102725_102917_-	hypothetical protein	NA	NA	NA	NA
WP_001151572.1\|103008_103350_-	hypothetical protein	NA	NA	NA	NA
WP_000880375.1\|104335_104590_+	hypothetical protein	NA	NA	NA	NA
WP_000166877.1\|104592_106632_-	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	1.7e-25	25.3
WP_000211823.1\|106628_107615_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|108535_108928_+	hypothetical protein	NA	NA	NA	NA
WP_115314327.1\|110820_111525_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	3.0e-102	77.0
WP_001044210.1\|111530_111671_+	hypothetical protein	NA	NA	NA	NA
WP_001446887.1\|112156_112894_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|112890_113115_+	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|113325_114819_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001447541.1\|114849_115734_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_023300759.1\|115950_117165_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
WP_001255015.1\|117192_117498_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001067858.1\|117721_118426_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001235713.1\|118741_119299_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|119481_120342_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_000462754.1\|120659_121316_+\|protease	trypsin-like serine protease	NA	NA	NA	NA

DBSCAN-SWA_8

126223 : 166746

Escherichia_phage(27.27%)

transposase,integrase

attL 143629:143682|attR 143950:144003

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001641519.1\|126223_127039_+	HNH endonuclease	G0X580	Salmonella_phage	2.5e-15	37.2
WP_000278471.1\|127291_127717_+	hypothetical protein	NA	NA	NA	NA
WP_001224686.1\|128265_128574_+	hypothetical protein	NA	NA	NA	NA
WP_012477564.1\|128904_129495_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_001493762.1\|129631_130204_+	recombinase family protein	M9Q1K0	Clostridium_phage	3.4e-19	39.4
WP_001493761.1\|130240_131632_+\|transposase	ISKra4-like element ISKpn19 family transposase	NA	NA	NA	NA
WP_001516695.1\|132411_133068_-	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
WP_012477595.1\|134664_135522_-	class A beta-lactamase LAP-2	Q1MVP3	Enterobacteria_phage	2.0e-92	61.1
WP_040212993.1\|135586_136690_-	peptidoglycan synthetase FtsI	NA	NA	NA	NA
WP_001351729.1\|138451_138844_+	cysteine hydrolase	NA	NA	NA	NA
WP_000058717.1\|138981_139866_+	EamA family transporter	NA	NA	NA	NA
WP_000804064.1\|139897_141097_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000164043.1\|141202_141853_+	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_087758686.1\|141884_142040_-	replication initiator protein	NA	NA	NA	NA
WP_001067855.1\|142030_142735_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001389365.1\|142863_143628_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
143629:143682	attL	NA	NA	NA	NA
WP_001375131.1\|143691_143949_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A077SL39	Escherichia_phage	8.9e-12	61.9
WP_000993245.1\|144186_144399_-	DUF3330 domain-containing protein	NA	NA	NA	NA
143950:144003	attR	NA	NA	NA	NA
WP_001446012.1\|144361_144481_+	hypothetical protein	NA	NA	NA	NA
WP_001087807.1\|144464_144701_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|144697_145063_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|145080_146766_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|146804_147230_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|147257_147533_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294656.1\|147548_147914_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|147985_148441_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001287391.1\|149721_150126_-	H-NS histone family protein	NA	NA	NA	NA
WP_001100635.1\|150303_150597_-	hypothetical protein	NA	NA	NA	NA
WP_000175475.1\|150622_150859_-	hypothetical protein	NA	NA	NA	NA
WP_000916941.1\|150899_151355_-	hypothetical protein	NA	NA	NA	NA
WP_001447900.1\|151414_152080_-	hypothetical protein	NA	NA	NA	NA
WP_001371925.1\|152137_152518_-	hypothetical protein	NA	NA	NA	NA
WP_020833813.1\|153269_154112_+\|transposase	transposase	NA	NA	NA	NA
WP_151122815.1\|154098_156222_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_001049182.1\|156221_157670_+	ATP-binding protein	NA	NA	NA	NA
WP_024143025.1\|157711_159268_+\|transposase	transposase	NA	NA	NA	NA
WP_000262426.1\|159279_160206_+	hypothetical protein	NA	NA	NA	NA
WP_001097217.1\|160568_160868_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_151122818.1\|161430_161589_+	AAA family ATPase	NA	NA	NA	NA
WP_148577032.1\|161585_163256_+	AAA family ATPase	E5E3R2	Burkholderia_phage	6.0e-08	23.9
WP_000694954.1\|163422_163773_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	2.1e-19	53.3
WP_151122821.1\|163916_164348_-	silver-binding protein SilE	NA	NA	NA	NA
WP_000555738.1\|164597_166073_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.9e-26	29.3
WP_000697969.1\|166065_166746_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	36.0

DBSCAN-SWA_9

170118 : 177375

Leptospira_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032620969.1\|170118_173265_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	3.6e-62	22.4
WP_000758228.1\|173351_173792_+	hypothetical protein	NA	NA	NA	NA
WP_023331515.1\|173918_176366_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	34.9
WP_000843494.1\|176406_176604_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_000287501.1\|176637_177375_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.3e-10	31.9

DBSCAN-SWA_10

182469 : 184547

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001188930.1\|182469_183150_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_001211180.1\|183146_184547_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	3.2e-18	26.6

DBSCAN-SWA_11

191306 : 193464

Burkholderia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833380.1\|191306_192734_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_011152982.1\|192948_193464_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6

DBSCAN-SWA_12

205141 : 206819

Cronobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000111290.1\|205141_205576_+	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	2.5e-22	48.8
WP_000281824.1\|205559_206819_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.5e-96	44.5

DBSCAN-SWA_13

230528 : 284066

uncultured_Caudovirales_phage(26.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000952985.1\|230528_231710_+	S49 family peptidase	B8QTU8	Erwinia_phage	7.5e-13	29.2
WP_000338612.1\|231711_232443_+	NERD domain-containing protein	NA	NA	NA	NA
WP_000210769.1\|232729_233083_-	hypothetical protein	NA	NA	NA	NA
WP_001091367.1\|233148_233433_-	hypothetical protein	NA	NA	NA	NA
WP_001339197.1\|234058_235267_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_000428546.1\|235780_236374_+	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_001089072.1\|236486_237692_-	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_001322387.1\|237770_238397_+	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001284954.1\|238374_239061_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000460651.1\|239068_239455_-	hypothetical protein	NA	NA	NA	NA
WP_000562370.1\|239447_239768_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_000599531.1\|240211_241417_+	sodium/glutamate symporter	NA	NA	NA	NA
WP_001352368.1\|241782_242991_-\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_058671460.1\|243050_243245_-	hypothetical protein	NA	NA	NA	NA
WP_000537761.1\|243677_244046_-	hypothetical protein	NA	NA	NA	NA
WP_000800251.1\|244271_244808_-	hypothetical protein	NA	NA	NA	NA
WP_000286108.1\|244875_245313_-	hypothetical protein	NA	NA	NA	NA
WP_000856246.1\|245357_245654_-	hypothetical protein	NA	NA	NA	NA
WP_000237191.1\|245788_246490_-	hypothetical protein	NA	NA	NA	NA
WP_000708863.1\|246804_247086_-	hypothetical protein	NA	NA	NA	NA
WP_001272971.1\|247151_248336_-	hypothetical protein	NA	NA	NA	NA
WP_000778029.1\|249439_250384_+	DUF5417 domain-containing protein	NA	NA	NA	NA
WP_001031420.1\|250482_251082_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.7e-08	42.6
WP_000743059.1\|251141_251492_+	hypothetical protein	NA	NA	NA	NA
WP_001015183.1\|251538_251742_+	hypothetical protein	NA	NA	NA	NA
WP_000332796.1\|252023_252344_+	hypothetical protein	NA	NA	NA	NA
WP_001615628.1\|252995_254108_+\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_001447866.1\|254301_254460_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_040150689.1\|254666_255095_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	9.6e-51	69.3
WP_040150692.1\|255107_256397_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	9.9e-168	71.4
WP_151122832.1\|256441_256762_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	2.0e-21	47.6
WP_040150695.1\|256847_257546_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	2.5e-88	67.2
WP_100249820.1\|257554_258924_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	5.0e-77	69.7
WP_000137794.1\|259252_259858_-	hypothetical protein	NA	NA	NA	NA
WP_000703842.1\|260074_260356_-	hypothetical protein	NA	NA	NA	NA
WP_000633161.1\|260731_261043_-	hypothetical protein	NA	NA	NA	NA
WP_000814953.1\|261265_261466_-	hypothetical protein	NA	NA	NA	NA
WP_000551490.1\|261505_261730_-	hypothetical protein	NA	NA	NA	NA
WP_000781547.1\|261784_261988_-	hypothetical protein	NA	NA	NA	NA
WP_001371932.1\|262540_263032_-	DUF3085 domain-containing protein	NA	NA	NA	NA
WP_001165367.1\|263036_263348_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000071366.1\|263864_264185_-	hypothetical protein	NA	NA	NA	NA
WP_001371935.1\|264363_264594_-	hypothetical protein	NA	NA	NA	NA
WP_000252081.1\|264765_265659_-	hypothetical protein	NA	NA	NA	NA
WP_000609386.1\|265648_266761_-	toxic anion resistance protein	NA	NA	NA	NA
WP_001371906.1\|266757_267543_-	toxic anion resistance protein TelA	NA	NA	NA	NA
WP_000280723.1\|268137_268746_-	hypothetical protein	NA	NA	NA	NA
WP_000241452.1\|268859_269393_-	HNH endonuclease	E7EKU5	Edwardsiella_phage	6.8e-46	65.2
WP_087776199.1\|269484_270692_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.6e-101	62.7
WP_000159617.1\|270799_270994_-	hypothetical protein	NA	NA	NA	NA
WP_000172888.1\|270990_271302_-	hypothetical protein	NA	NA	NA	NA
WP_001180999.1\|271364_271604_-	hypothetical protein	NA	NA	NA	NA
WP_000469469.1\|271853_274238_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA
WP_000182312.1\|274403_274853_-	hypothetical protein	NA	NA	NA	NA
WP_000774871.1\|274903_275695_-	hypothetical protein	NA	NA	NA	NA
WP_001052325.1\|275924_276182_-	hypothetical protein	NA	NA	NA	NA
WP_000556023.1\|276247_276574_-	hypothetical protein	NA	NA	NA	NA
WP_000834113.1\|276816_277137_-	hypothetical protein	NA	NA	NA	NA
WP_000104394.1\|277431_278682_-	site-specific DNA-methyltransferase	G8I4P9	Mycobacterium_phage	6.1e-05	43.1
WP_151122835.1\|278852_279461_-	hypothetical protein	K4JV11	Caulobacter_phage	4.4e-25	38.5
WP_001290639.1\|279616_279874_-	hypothetical protein	NA	NA	NA	NA
WP_000069824.1\|279938_280367_-	hypothetical protein	NA	NA	NA	NA
WP_000645320.1\|280458_280836_-	hypothetical protein	NA	NA	NA	NA
WP_001339197.1\|281207_282416_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_011152995.1\|282579_283761_-	hypothetical protein	NA	NA	NA	NA
WP_000581857.1\|283769_284066_-	toxin-plasmid maintenance system killer protein	A0A222YWE2	Escherichia_phage	3.2e-05	35.1

DBSCAN-SWA_14

288521 : 288953

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001251242.1\|288521_288953_-	hypothetical protein	A0A1V0E5M6	Salmonella_phage	4.2e-22	49.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP044257

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP044256

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection