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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP044354 Lactobacillus fermentum strain 2760 chromosome, complete genome 4 crisprs cas14j,cas3,DEDDh,cas9,cas1,cas2,csn2,Cas14u_CAS-V,WYL,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,csa3 0 34 19 0

Results visualization

1. NZ_CP044354
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044354_1 908332-910017 TypeII NA
25 spacers
csn2,cas2,cas1,cas9,Cas14u_CAS-V

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044354_2 1173005-1174344 TypeIII NA
18 spacers
cas1,cas2,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044354_3 1394776-1396149 TypeI-E NA
22 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044354_4 1615728-1616200 Orphan NA
7 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 MN830253 Lactobacillus phage JNU_P5, complete genome 39934-39963 0 1.0
NZ_CP044354_2 2.1|1173041|35|NZ_CP044354|CRISPRCasFinder 1173041-1173075 35 CP033373 Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence 228755-228789 0 1.0
NZ_CP044354_2 2.2|1173112|35|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT 1173112-1173146 35 CP033373 Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence 228826-228860 0 1.0
NZ_CP044354_2 2.3|1173183|38|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT 1173183-1173220 38 CP033373 Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence 229260-229297 0 1.0
NZ_CP044354_2 2.17|1174204|34|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT 1174204-1174237 34 KP054477 Lactobacillus phage LfeInf, complete genome 104224-104257 0 1.0
NZ_CP044354_3 3.4|1394987|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394987-1395019 33 GU323708 Lactobacillus phage phiPYB5, complete genome 21745-21777 0 1.0
NZ_CP044354_1 1.2|908434|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908434-908463 30 NC_029068 Lactobacillus phage LfeSau, complete genome 7964-7993 1 0.967
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 LN885237 Lactobacillus phage EV3 genome assembly, complete genome: monopartite 10280-10312 1 0.97
NZ_CP044354_1 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909292-909321 30 GU323708 Lactobacillus phage phiPYB5, complete genome 30920-30949 2 0.933
NZ_CP044354_3 3.3|1394926|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394926-1394958 33 GU323708 Lactobacillus phage phiPYB5, complete genome 21412-21444 2 0.939
NZ_CP044354_3 3.10|1395353|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395353-1395385 33 KP054477 Lactobacillus phage LfeInf, complete genome 95402-95434 2 0.939
NZ_CP044354_3 3.16|1395719|36|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395719-1395754 36 KP054477 Lactobacillus phage LfeInf, complete genome 22810-22845 2 0.944
NZ_CP044354_3 3.21|1396028|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1396028-1396060 33 GU323708 Lactobacillus phage phiPYB5, complete genome 12752-12784 2 0.939
NZ_CP044354_3 3.22|1396089|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1396089-1396121 33 NC_029068 Lactobacillus phage LfeSau, complete genome 1014-1046 2 0.939
NZ_CP044354_1 1.3|908500|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908500-908529 30 MN830252 Lactobacillus phage JNU_P1, complete genome 44252-44281 3 0.9
NZ_CP044354_1 1.19|909556|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909556-909585 30 HQ141410 Lactobacillus phage LF1, complete genome 19824-19853 3 0.9
NZ_CP044354_2 2.11|1173762|39|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT 1173762-1173800 39 KP054477 Lactobacillus phage LfeInf, complete genome 103868-103906 3 0.923
NZ_CP044354_1 1.8|908830|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908830-908859 30 HQ141410 Lactobacillus phage LF1, complete genome 37281-37310 4 0.867
NZ_CP044354_1 1.19|909556|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909556-909585 30 GU323708 Lactobacillus phage phiPYB5, complete genome 17128-17157 4 0.867
NZ_CP044354_1 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908632-908661 30 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 713487-713516 5 0.833
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 NC_019401 Cronobacter phage vB_CsaM_GAP32, complete genome 305899-305928 5 0.833
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 NC_019274 Psychrobacter sp. DAB_AL62B plasmid pP62BP1, complete sequence 2443-2472 5 0.833
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 NZ_AP019800 Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence 31913-31942 6 0.8
NZ_CP044354_3 3.4|1394987|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394987-1395019 33 MN096362 Arthrobacter phage Vibaki, complete genome 18966-18998 6 0.818
NZ_CP044354_1 1.4|908566|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908566-908595 30 NZ_CP018062 Enterococcus mundtii strain DSM 4838 plasmid pLDW-8, complete sequence 12565-12594 7 0.767
NZ_CP044354_1 1.4|908566|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908566-908595 30 NZ_CP018062 Enterococcus mundtii strain DSM 4838 plasmid pLDW-8, complete sequence 136597-136626 7 0.767
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 MN013084 Klebsiella phage vB_KaeM_KaAlpha, complete genome 151274-151303 7 0.767
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 KJ101592 Enterobacter phage PG7, complete genome 150417-150446 7 0.767
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 GU323318 Enterobacteria phage CC31, complete genome 142375-142404 7 0.767
NZ_CP044354_1 1.10|908962|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908962-908991 30 MG878892 Salmonella phage vB_SpuP_Spp16, complete genome 26943-26972 7 0.767
NZ_CP044354_1 1.11|909028|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909028-909057 30 NC_013379 Staphylococcus epidermidis plasmid SAP106A, complete sequence 13934-13963 7 0.767
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 NC_002182 Chlamydia muridarum str. Nigg plasmid pMoPn, complete sequence 3362-3391 7 0.767
NZ_CP044354_3 3.10|1395353|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395353-1395385 33 NC_020292 Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence 34361-34393 7 0.788
NZ_CP044354_1 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908632-908661 30 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 441926-441955 8 0.733
NZ_CP044354_1 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908632-908661 30 NZ_CP032349 Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence 157908-157937 8 0.733
NZ_CP044354_1 1.6|908698|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908698-908727 30 MN693811 Marine virus AFVG_250M463, complete genome 60401-60430 8 0.733
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 MK250016 Prevotella phage Lak-A1, complete genome 129304-129333 8 0.733
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 AP013705 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C19-MedDCM-OCT-S32-C53, *** SEQUENCING IN PROGRESS *** 12235-12264 8 0.733
NZ_CP044354_1 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908764-908793 30 AP013704 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C19-MedDCM-OCT-S23-C49, *** SEQUENCING IN PROGRESS *** 1809-1838 8 0.733
NZ_CP044354_1 1.13|909160|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909160-909189 30 NC_010844 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' plasmid p74, complete sequence 48193-48222 8 0.733
NZ_CP044354_1 1.13|909160|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909160-909189 30 NC_010846 Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' plasmid p74, complete sequence 47966-47995 8 0.733
NZ_CP044354_1 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909292-909321 30 NZ_CP007515 Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence 183983-184012 8 0.733
NZ_CP044354_1 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909292-909321 30 NZ_CP030264 Ensifer adhaerens strain Corn53 plasmid AB, complete sequence 930831-930860 8 0.733
NZ_CP044354_3 3.1|1394804|33|NZ_CP044354|CRISPRCasFinder,CRT 1394804-1394836 33 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 953100-953132 8 0.758
NZ_CP044354_3 3.18|1395844|34|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395844-1395877 34 MK327936 Escherichia phage vB_EcoM_G2540, complete genome 107061-107094 8 0.765
NZ_CP044354_3 3.20|1395967|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395967-1395999 33 MN604698 Bacillus phage vB_BcM_Sam46, complete genome 27678-27710 8 0.758
NZ_CP044354_4 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder 1615886-1615916 31 NZ_CP021878 Enterococcus wangshanyuanii strain MN05 plasmid unnamed5 5048-5078 8 0.742
NZ_CP044354_4 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder 1615886-1615916 31 NZ_CP021878 Enterococcus wangshanyuanii strain MN05 plasmid unnamed5 55561-55591 8 0.742
NZ_CP044354_1 1.3|908500|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908500-908529 30 NZ_AP018282 Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome 25836-25865 9 0.7
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 NZ_CP022288 Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence 22867-22896 9 0.7
NZ_CP044354_1 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 909094-909123 30 NZ_CP035229 Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence 78490-78519 9 0.7
NZ_CP044354_2 2.7|1173475|37|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT 1173475-1173511 37 NZ_CP040940 Cetia pacifica strain TB6 plasmid unnamed1, complete sequence 71-107 9 0.757
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 MT786458 Staphylococcus phage vB_SauH_SAP1, complete genome 40677-40709 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 MG557618 Staphylococcus phage HSA30, complete genome 103589-103621 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 KY779849 Staphylococcus phage qdsa002, complete genome 6255-6287 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 MH159197 Staphylococcus phage VB_SavM_JYL01, complete genome 118386-118418 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 MN304941 Staphylococcus phage vB_SauH_IME522, complete genome 33923-33955 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 MK250904 Staphylococcus phage VB-SavM-JYL02, complete genome 116958-116990 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 KM216423 Staphylococcus phage P108, complete genome 84221-84253 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 NC_028765 Staphylococcus phage phiIPLA-RODI, complete genome 139370-139402 9 0.727
NZ_CP044354_3 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1394865-1394897 33 NC_019448 Staphylococcus phage GH15, complete genome 2108-2140 9 0.727
NZ_CP044354_4 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder 1615886-1615916 31 NC_019730 Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence 240578-240608 9 0.71
NZ_CP044354_1 1.9|908896|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT 908896-908925 30 MK448692 Streptococcus phage Javan173, complete genome 30640-30669 10 0.667
NZ_CP044354_3 3.5|1395048|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395048-1395080 33 LT598654 Phage NCTB genome assembly, complete genome: monopartite 233152-233184 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 KY575286 UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome 22587-22619 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MT894005 Klebsiella phage MMBB, complete genome 26045-26077 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MG552615 Klebsiella virus GML-KpCol1, complete genome 41918-41950 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 KP658157 Klebsiella phage 1513, complete genome 25661-25693 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MN692951 Marine virus AFVG_117M12, complete genome 23969-24001 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MH844531 Klebsiella phage GH-K3, complete genome 48884-48916 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MH633486 Klebsiella phage NJS3, complete genome 477-509 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 NC_049842 Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome 12787-12819 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 LR757892 Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1 5222-5254 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MF415412 Klebsiella phage KPN N141, complete genome 12789-12821 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MF612072 Klebsiella phage MezzoGao, complete genome 36299-36331 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 MH633484 Klebsiella phage TAH8, complete genome 636-668 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 NC_048043 Klebsiella phage NJS2, complete genome 689-721 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 NC_049838 Klebsiella phage KL, complete genome 9981-10013 10 0.697
NZ_CP044354_3 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR 1395292-1395324 33 NC_048044 Klebsiella phage NJR15, complete genome 474-506 10 0.697
NZ_CP044354_4 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder 1616012-1616042 31 NZ_CP004882 Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMBLin15, complete sequence 13746-13776 10 0.677
NZ_CP044354_4 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder 1616012-1616042 31 NZ_CP011355 Bacillus thuringiensis strain YC-10 plasmid pYC10, complete sequence 10642-10672 10 0.677
NZ_CP044354_4 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder 1616012-1616042 31 NC_006945 Bacillus phage GIL16c, complete genome 13737-13767 10 0.677
NZ_CP044354_4 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder 1616012-1616042 31 AY701338 Bacillus thuringiensis phage GIL16c, complete genome 13737-13767 10 0.677

1. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 0, identity: 1.0

acttttctattgatgaagaaaagtacttag	CRISPR spacer
acttttctattgatgaagaaaagtacttag	Protospacer
******************************

2. spacer 2.1|1173041|35|NZ_CP044354|CRISPRCasFinder matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggctggggatacgacgaagatatcaacgaagaaac	CRISPR spacer
ggctggggatacgacgaagatatcaacgaagaaac	Protospacer
***********************************

3. spacer 2.2|1173112|35|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aatagggggtaattgtatagttgataaataaaatg	CRISPR spacer
aatagggggtaattgtatagttgataaataaaatg	Protospacer
***********************************

4. spacer 2.3|1173183|38|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gattccaacagaagcaaagcacaccatcagagatcttc	CRISPR spacer
gattccaacagaagcaaagcacaccatcagagatcttc	Protospacer
**************************************

5. spacer 2.17|1174204|34|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 0, identity: 1.0

gggttgatctttacacgcgtgattttgaggattt	CRISPR spacer
gggttgatctttacacgcgtgattttgaggattt	Protospacer
**********************************

6. spacer 3.4|1394987|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 0, identity: 1.0

cttagcttgagcacttggcctggatagatccag	CRISPR spacer
cttagcttgagcacttggcctggatagatccag	Protospacer
*********************************

7. spacer 1.2|908434|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 1, identity: 0.967

tcgtgtcagtgtcacgttgcgggtcaaagt	CRISPR spacer
tcgtgtcggtgtcacgttgcgggtcaaagt	Protospacer
*******.**********************

8. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to LN885237 (Lactobacillus phage EV3 genome assembly, complete genome: monopartite) position: , mismatch: 1, identity: 0.97

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagctgctcaacatgcccaacgta	Protospacer
*************.*******************

9. spacer 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 2, identity: 0.933

cagtacttgcgaccggcgaccctctttggc	CRISPR spacer
cagtacttacgaccggcgaccctctttgga	Protospacer
********.******************** 

10. spacer 3.3|1394926|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 2, identity: 0.939

gaccgggaagcagcttcaccaggacacgcacaa	CRISPR spacer
gactggtaagcagcttcaccaggacacgcacaa	Protospacer
***.** **************************

11. spacer 3.10|1395353|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 2, identity: 0.939

tagtgttaaggatagcgaagctaataaagttta	CRISPR spacer
tagtgttaaggatagtgaagctaataaggttta	Protospacer
***************.***********.*****

12. spacer 3.16|1395719|36|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 2, identity: 0.944

caactcgctatgatgattatgtagggattagtgtta	CRISPR spacer
ccactcgctatgatgattatgtaggtattagtgtta	Protospacer
* *********************** **********

13. spacer 3.21|1396028|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 2, identity: 0.939

cctgaaactcctcgtaagttgttggctggtgca	CRISPR spacer
cctgaaactcctcataagttgttggttggtgca	Protospacer
*************.***********.*******

14. spacer 3.22|1396089|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_029068 (Lactobacillus phage LfeSau, complete genome) position: , mismatch: 2, identity: 0.939

acggttcggtccgatttattaaccttgcaaaga	CRISPR spacer
acggtacggtctgatttattaaccttgcaaaga	Protospacer
***** *****.*********************

15. spacer 1.3|908500|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MN830252 (Lactobacillus phage JNU_P1, complete genome) position: , mismatch: 3, identity: 0.9

agcgaagctaagaaactggtagctagatgc	CRISPR spacer
agcgaagctaagaaactggtagctgaatac	Protospacer
************************..**.*

16. spacer 1.19|909556|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to HQ141410 (Lactobacillus phage LF1, complete genome) position: , mismatch: 3, identity: 0.9

atcgttgaccataaggcgttaattgctccc	CRISPR spacer
atcgttgaccataaggcgttgattgcgtcc	Protospacer
********************.***** .**

17. spacer 2.11|1173762|39|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT matches to KP054477 (Lactobacillus phage LfeInf, complete genome) position: , mismatch: 3, identity: 0.923

gatagtgaatatgacgtttatacgcaagttggaaccttg	CRISPR spacer
aatagtgaatatgacgtttatacgcaagttggaaccctt	Protospacer
.***********************************.* 

18. spacer 1.8|908830|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to HQ141410 (Lactobacillus phage LF1, complete genome) position: , mismatch: 4, identity: 0.867

cctgaacg-atggcacaacgacggatgttta	CRISPR spacer
-gtgattgaatggcacaacgacggatgttta	Protospacer
  *** .* **********************

19. spacer 1.19|909556|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 4, identity: 0.867

atcgttgaccataaggcgttaattgctccc	CRISPR spacer
atcgtggaccataaggcgttgattgcgtcc	Protospacer
***** **************.***** .**

20. spacer 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.833

cgtgccgctaacggtcgaagcggt--cgattg	CRISPR spacer
cgtggcgctcacggtcgaagcggcggcgat--	Protospacer
**** **** *************.  ****  

21. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 5, identity: 0.833

---tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
gattcgtt---tcaatttttttacgttttttta	Protospacer
   *****   ***** *************** 

22. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_019274 (Psychrobacter sp. DAB_AL62B plasmid pP62BP1, complete sequence) position: , mismatch: 5, identity: 0.833

acttttctattgatgaagaaaagtacttag	CRISPR spacer
actttaatattgatgaagaaaagtatattg	Protospacer
*****  ******************. * *

23. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019800 (Vibrio rotiferianus strain AM7 plasmid pAM7, complete sequence) position: , mismatch: 6, identity: 0.8

acttttctattgatgaagaaaagtacttag	CRISPR spacer
attgctctattgatggagaagagtacttac	Protospacer
*.* .**********.****.******** 

24. spacer 3.4|1394987|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MN096362 (Arthrobacter phage Vibaki, complete genome) position: , mismatch: 6, identity: 0.818

cttagcttgagcacttggcctggatagatccag	CRISPR spacer
gggatcttgaacacttggccgggatagatccag	Protospacer
   * *****.********* ************

25. spacer 1.4|908566|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018062 (Enterococcus mundtii strain DSM 4838 plasmid pLDW-8, complete sequence) position: , mismatch: 7, identity: 0.767

gatagaatttgtccctttggatagtaatat	CRISPR spacer
tttagaatttgttcctttggatagagtgat	Protospacer
  **********.*********** .  **

26. spacer 1.4|908566|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018062 (Enterococcus mundtii strain DSM 4838 plasmid pLDW-8, complete sequence) position: , mismatch: 7, identity: 0.767

gatagaatttgtccctttggatagtaatat	CRISPR spacer
tttagaatttgttcctttggatagagtgat	Protospacer
  **********.*********** .  **

27. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MN013084 (Klebsiella phage vB_KaeM_KaAlpha, complete genome) position: , mismatch: 7, identity: 0.767

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
cttttaattcaatatttttacgtttcatta	Protospacer
.. **** *****************. ** 

28. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to KJ101592 (Enterobacter phage PG7, complete genome) position: , mismatch: 7, identity: 0.767

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
cttttaattcaatatttttacgtttcatta	Protospacer
.. **** *****************. ** 

29. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to GU323318 (Enterobacteria phage CC31, complete genome) position: , mismatch: 7, identity: 0.767

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
cttttaattcaatatttttacgtttcatta	Protospacer
.. **** *****************. ** 

30. spacer 1.10|908962|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MG878892 (Salmonella phage vB_SpuP_Spp16, complete genome) position: , mismatch: 7, identity: 0.767

atctttaaataacggtcatcgcccatatca	CRISPR spacer
acacgtaaataactgtcatcacccatatct	Protospacer
*. . ******** ******.******** 

31. spacer 1.11|909028|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_013379 (Staphylococcus epidermidis plasmid SAP106A, complete sequence) position: , mismatch: 7, identity: 0.767

cagttttacaatgactacgggatccattgg	CRISPR spacer
aacttttacaatgaatacgggatctagagc	Protospacer
 * *********** *********.*  * 

32. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_002182 (Chlamydia muridarum str. Nigg plasmid pMoPn, complete sequence) position: , mismatch: 7, identity: 0.767

acttttctattgatgaagaaaagtacttag	CRISPR spacer
tcctttctattgatgaacaaaattacatct	Protospacer
 *.************** **** *** *  

33. spacer 3.10|1395353|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_020292 (Clostridium saccharoperbutylacetonicum N1-4(HMT) plasmid Csp_135p, complete sequence) position: , mismatch: 7, identity: 0.788

tagtgttaaggatagcgaagctaataaagttta	CRISPR spacer
tccaattaaggatagcgaaggtaataaatttga	Protospacer
*   .*************** ******* ** *

34. spacer 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 8, identity: 0.733

cgtgccgctaacggtcgaagcggtcgattg	CRISPR spacer
cgtggcgctcacggtcgaagcggctgcaat	Protospacer
**** **** *************..*    

35. spacer 1.5|908632|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

cgtgccgctaacggtcgaagcggtcgattg	CRISPR spacer
cgtgcggctaacggtcgcagcggaatgccg	Protospacer
***** *********** *****   ...*

36. spacer 1.6|908698|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MN693811 (Marine virus AFVG_250M463, complete genome) position: , mismatch: 8, identity: 0.733

tttaactttaaaggcaatcacattaaatcc	CRISPR spacer
ccgttctttaaaggcaaacacattaaattt	Protospacer
..   ************ **********..

37. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.733

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
tagttaagtctatatttttatgtttagcat	Protospacer
* ******** *********.****  . .

38. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to AP013705 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C19-MedDCM-OCT-S32-C53, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
atgttaagtcagtatctttacgtttgtcag	Protospacer
 .*********.***.********* *.  

39. spacer 1.7|908764|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to AP013704 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C19-MedDCM-OCT-S23-C49, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tcgttaagtcaatatttttacgtttttttc	CRISPR spacer
atgttaagtcagtatctttacgtttgtcag	Protospacer
 .*********.***.********* *.  

40. spacer 1.13|909160|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_010844 (Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' plasmid p74, complete sequence) position: , mismatch: 8, identity: 0.733

cattctgggctaagttagaagcaaaggtcc	CRISPR spacer
ccgattgggctaagttagaaggaaaggatg	Protospacer
*   .**************** ***** . 

41. spacer 1.13|909160|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NC_010846 (Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' plasmid p74, complete sequence) position: , mismatch: 8, identity: 0.733

cattctgggctaagttagaagcaaaggtcc	CRISPR spacer
ccgattgggctaagttagaaggaaaggatg	Protospacer
*   .**************** ***** . 

42. spacer 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007515 (Rubrobacter radiotolerans strain RSPS-4 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

cagtacttgcgaccggcgaccctctttggc	CRISPR spacer
aggtacttgcgaccggcgaccatcgcctcc	Protospacer
 .******************* ** ..  *

43. spacer 1.15|909292|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.733

cagtacttgcgaccggcgaccctctttggc	CRISPR spacer
ccgtacttgcgaccggcgtcccttgccgtt	Protospacer
* **************** ****. ..* .

44. spacer 3.1|1394804|33|NZ_CP044354|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.758

aagccgcagagaccgagaatggtgagcacggtg	CRISPR spacer
gcgacaccgagaccgacaatggtcagcacggtc	Protospacer
. * *.* ******** ****** ******** 

45. spacer 3.18|1395844|34|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MK327936 (Escherichia phage vB_EcoM_G2540, complete genome) position: , mismatch: 8, identity: 0.765

aactgccaag--tcaaacttatccttaccagtcata	CRISPR spacer
--ttctcgagtttcaaacttattcttagcagtcata	Protospacer
  .* .*.**  **********.**** ********

46. spacer 3.20|1395967|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MN604698 (Bacillus phage vB_BcM_Sam46, complete genome) position: , mismatch: 8, identity: 0.758

catttgttttttagtcattgttcagccctccta	CRISPR spacer
aacctcttttttagccattgtttagccctcccg	Protospacer
 *..* ********.*******.********..

47. spacer 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder matches to NZ_CP021878 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed5) position: , mismatch: 8, identity: 0.742

gttgctgtagaattggttggtgtaccgggcc	CRISPR spacer
gttgctgtagaattgattggtgtcgtccgtg	Protospacer
***************.*******  .  *. 

48. spacer 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder matches to NZ_CP021878 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed5) position: , mismatch: 8, identity: 0.742

gttgctgtagaattggttggtgtaccgggcc	CRISPR spacer
gttgctgtagaattgattggtgtcgtccgtg	Protospacer
***************.*******  .  *. 

49. spacer 1.3|908500|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018282 (Chondrocystis sp. NIES-4102 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.7

agcgaagctaagaaactggtagctagatgc	CRISPR spacer
gccaaagctaagaaactagtagctaagatt	Protospacer
. *.*************.*******..  .

50. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022288 (Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence) position: , mismatch: 9, identity: 0.7

acttttctattgatgaagaaaagtacttag	CRISPR spacer
cctttactattgatgaagaaaatgaaaagc	Protospacer
 **** ****************  *   . 

51. spacer 1.12|909094|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035229 (Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

acttttctattgatgaagaaaagtacttag	CRISPR spacer
cctttactattgatgaagaaaatgaaaagc	Protospacer
 **** ****************  *   . 

52. spacer 2.7|1173475|37|NZ_CP044354|CRISPRCasFinder,PILER-CR,CRT matches to NZ_CP040940 (Cetia pacifica strain TB6 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.757

ggcacgacgtagttattaactttaacggcaatctacg	CRISPR spacer
acaataacgtagttatttactttaacggcaatatctg	Protospacer
.  *..*********** ************** * .*

53. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MT786458 (Staphylococcus phage vB_SauH_SAP1, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

54. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MG557618 (Staphylococcus phage HSA30, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

55. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KY779849 (Staphylococcus phage qdsa002, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

56. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MH159197 (Staphylococcus phage VB_SavM_JYL01, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

57. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MN304941 (Staphylococcus phage vB_SauH_IME522, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

58. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MK250904 (Staphylococcus phage VB-SavM-JYL02, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

59. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KM216423 (Staphylococcus phage P108, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

60. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_028765 (Staphylococcus phage phiIPLA-RODI, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

61. spacer 3.2|1394865|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_019448 (Staphylococcus phage GH15, complete genome) position: , mismatch: 9, identity: 0.727

tactttagattaaagtcaatacttttattgaaa	CRISPR spacer
aattcggtcttaatgtcaatacttttattcaaa	Protospacer
 *.*. .  **** *************** ***

62. spacer 4.3|1615886|31|NZ_CP044354|CRISPRCasFinder matches to NC_019730 (Oscillatoria nigro-viridis PCC 7112 plasmid pOSC7112.02, complete sequence) position: , mismatch: 9, identity: 0.71

gttgctgtagaattggttggtgtaccgggcc	CRISPR spacer
cctactgtataattggttggagtaccgaaat	Protospacer
 .*.***** ********** ******.. .

63. spacer 1.9|908896|30|NZ_CP044354|PILER-CR,CRISPRCasFinder,CRT matches to MK448692 (Streptococcus phage Javan173, complete genome) position: , mismatch: 10, identity: 0.667

cattacctttacctttcttgttgtataccg	CRISPR spacer
gattacctttacctttcttcttaagacttt	Protospacer
 ****************** **. .  .. 

64. spacer 3.5|1395048|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to LT598654 (Phage NCTB genome assembly, complete genome: monopartite) position: , mismatch: 10, identity: 0.697

tcgatgatgctgactttgacgagggtgagaaga	CRISPR spacer
tcgatgatgctgcttttgacgaggactctgacg	Protospacer
************ .**********..   .* .

65. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

66. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

67. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

68. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

69. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MN692951 (Marine virus AFVG_117M12, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
gatttcagcaagcggctcaacaagcccaacagg	Protospacer
 *    ******* ******** *******. .

70. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgagtggctgc	Protospacer
*****************.* ****  ...*   

71. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

72. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

73. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to LR757892 (Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

74. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

75. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

76. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

77. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

78. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

79. spacer 3.9|1395292|33|NZ_CP044354|CRISPRCasFinder,CRT,PILER-CR matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 10, identity: 0.697

cagaaaagcaagccgctcaacatgcccaacgta	CRISPR spacer
cagaaaagcaagccgcttaccatgaatggctgc	Protospacer
*****************.* ****  ...*   

80. spacer 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder matches to NZ_CP004882 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMBLin15, complete sequence) position: , mismatch: 10, identity: 0.677

attgctgtagaactggttcgtataacgaacg	CRISPR spacer
tagcctgtataactgtttcgtataacggggc	Protospacer
    ***** ***** ***********..  

81. spacer 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder matches to NZ_CP011355 (Bacillus thuringiensis strain YC-10 plasmid pYC10, complete sequence) position: , mismatch: 10, identity: 0.677

attgctgtagaactggttcgtataacgaacg	CRISPR spacer
tagcctgtataactgtttcgtataacggggc	Protospacer
    ***** ***** ***********..  

82. spacer 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder matches to NC_006945 (Bacillus phage GIL16c, complete genome) position: , mismatch: 10, identity: 0.677

attgctgtagaactggttcgtataacgaacg	CRISPR spacer
tagcctgtataactgtttcgtataacggggc	Protospacer
    ***** ***** ***********..  

83. spacer 4.5|1616012|31|NZ_CP044354|CRISPRCasFinder matches to AY701338 (Bacillus thuringiensis phage GIL16c, complete genome) position: , mismatch: 10, identity: 0.677

attgctgtagaactggttcgtataacgaacg	CRISPR spacer
tagcctgtataactgtttcgtataacggggc	Protospacer
    ***** ***** ***********..  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8676 : 47799 27 Paenibacillus_phage(13.33%) holin,transposase,tRNA NA
DBSCAN-SWA_2 158671 : 226912 51 Bacillus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_3 245840 : 278792 25 Lactobacillus_phage(18.18%) transposase,protease,tRNA NA
DBSCAN-SWA_4 355859 : 403515 49 Streptococcus_phage(33.33%) holin,transposase,tRNA NA
DBSCAN-SWA_5 431539 : 549835 118 Lactobacillus_phage(17.07%) transposase,integrase,protease,tRNA attL 441797:441856|attR 546013:546027
DBSCAN-SWA_6 554166 : 596934 35 Lactobacillus_phage(70.0%) terminase,transposase,head,portal,tail,capsid,tRNA NA
DBSCAN-SWA_7 694882 : 756510 60 Hokovirus(11.76%) transposase,protease,tRNA NA
DBSCAN-SWA_8 768205 : 813508 45 Lactobacillus_phage(26.67%) integrase,transposase,protease,tRNA attL 769680:769739|attR 778820:779863
DBSCAN-SWA_9 831994 : 890958 50 Streptococcus_phage(21.05%) transposase,tRNA NA
DBSCAN-SWA_10 959837 : 1018106 59 Lactobacillus_phage(12.5%) integrase,transposase,tRNA attL 985797:985814|attR 1019707:1019724
DBSCAN-SWA_11 1208862 : 1327582 114 Streptococcus_phage(20.0%) transposase NA
DBSCAN-SWA_12 1346566 : 1408356 43 Paenibacillus_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_13 1416861 : 1468694 52 Indivirus(11.11%) transposase,protease,tRNA NA
DBSCAN-SWA_14 1507960 : 1558344 47 Staphylococcus_phage(28.57%) transposase,protease,tRNA NA
DBSCAN-SWA_15 1572923 : 1708861 114 Streptococcus_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_16 1836617 : 1855933 19 unidentified_phage(42.86%) transposase NA
DBSCAN-SWA_17 1871178 : 1941941 52 Paenibacillus_phage(15.79%) integrase,transposase attL 1908035:1908065|attR 1954183:1954213
DBSCAN-SWA_18 2037584 : 2156411 106 Paenibacillus_phage(16.67%) transposase,tRNA NA
DBSCAN-SWA_19 2166743 : 2240357 58 Staphylococcus_phage(15.0%) transposase,protease,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage