Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP031728 Cellvibrio sp. KY-GH-1 chromosome, complete genome 5 crisprs WYL,DEDDh,csa3,RT,cas3,PD-DExK,DinG 0 1 8 0

Results visualization

1. NZ_CP031728
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031728_1 1937555-1937673 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031728_2 4020136-4020230 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031728_4 4334780-4334862 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031728_3 4334326-4334476 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP031728_5 4402448-4402527 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP031728_5 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder 4402472-4402503 32 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 732944-732975 9 0.719
NZ_CP031728_5 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder 4402472-4402503 32 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 634848-634879 9 0.719
NZ_CP031728_5 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder 4402472-4402503 32 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 634838-634869 9 0.719

1. spacer 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719

gtgataaatcacacccctgcggatatcacacc	CRISPR spacer
aacctaaatcagacccccgcggatatcgaacg	Protospacer
.   ******* *****.*********. ** 

2. spacer 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtgataaatcacacccctgcggatatcacacc	CRISPR spacer
aacctaaatcagacccccgcggatatcgaacg	Protospacer
.   ******* *****.*********. ** 

3. spacer 5.1|4402472|32|NZ_CP031728|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtgataaatcacacccctgcggatatcacacc	CRISPR spacer
aacctaaatcagacccccgcggatatcgaacg	Protospacer
.   ******* *****.*********. ** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 289432 : 320847 24 Acinetobacter_phage(25.0%) transposase NA
DBSCAN-SWA_2 501972 : 509964 12 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 778050 : 787522 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_4 1222217 : 1298274 72 Pseudomonas_phage(18.52%) holin,tRNA,head,tail,protease,portal,terminase,capsid NA
DBSCAN-SWA_5 1549214 : 1648358 89 uncultured_Mediterranean_phage(13.33%) transposase,tRNA,protease NA
DBSCAN-SWA_6 2877256 : 2923637 42 Paramecium_bursaria_Chlorella_virus(33.33%) integrase,plate,protease attL 2891147:2891161|attR 2927674:2927688
DBSCAN-SWA_7 3082185 : 3136982 47 Streptomyces_phage(16.67%) protease,plate,tRNA,tail NA
DBSCAN-SWA_8 3971536 : 4037216 48 uncultured_virus(16.67%) transposase,tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage