CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP031699	Neisseria animalis strain ATCC 49930 chromosome, complete genome	2 crisprs	cas3,DinG,csa3,DEDDh,cas9,cas1,cas2,PD-DExK,WYL	0	5	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP031699_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031699_1

627598-627687

Orphan

Consensus_repeat	Method
CCCCTAAAATGCAGACGGCCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP031699_1

>merge|NZ_CP031699|1|627598-627687|CRISPRCasFinder
CCCCTAAAATGCAGACGGCCTTTACCGCAAACCACTCAACCCAAACCCAATAAAAAGCAGCCCGCGCCCCCTAAAATACAGACGGCCTTT

>NZ_CP031699|1|1|627598-627687|CRISPRCasFinder
CCCCTAAAATGCAGACGGCCTTT	ACCGCAAACCACTCAACCCAAACCCAATAAAAAGCAGCCCGCGC
CCCCTAAAATACAGACGGCCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031699.1\|WP_123794985.1\|632866_633349_+\|NemA-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123794983.1\|631141_631744_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_162842961.1\|621629_621779_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123794986.1\|634337_634913_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123794975.1\|620260_620806_+\|crossover-junction-endodeoxyribonuclease-RuvC	unknown	unknown	gnl\|CDD\|234587
NZ_CP031699.1\|WP_123794977.1\|623397_624192_+\|3'-5'-exonuclease	unknown	unknown	gnl\|CDD\|378396
NZ_CP031699.1\|WP_123794978.1\|624812_627500_-\|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase	unknown	unknown	gnl\|CDD\|236836
NZ_CP031699.1\|WP_123794984.1\|631743_632592_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP031699.1\|WP_123794979.1\|627811_628825_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	unknown	unknown	gnl\|CDD\|236991
NZ_CP031699.1\|WP_123794988.1\|636497_637439_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_CP031699.1\|WP_123794973.1\|616860_617742_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|237820
NZ_CP031699.1\|WP_123794981.1\|629414_629903_-\|prokaryotic-membrane-lipolipid-attachment-site-family-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123795148.1\|621780_622650_+\|lipid-A-biosynthesis-lauroyl-acyltransferase	unknown	unknown	gnl\|CDD\|169557
NZ_CP031699.1\|WP_123794982.1\|630047_630980_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_CP031699.1\|WP_123794976.1\|620865_621633_+\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_CP031699.1\|WP_123794987.1\|635028_636366_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP031699.1\|WP_123794974.1\|618441_619950_-\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP031699.1\|WP_123794972.1\|615396_616554_+\|NnrS-family-protein	unknown	unknown	gnl\|CDD\|225754
NZ_CP031699.1\|WP_123794980.1\|628853_629078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123794971.1\|614801_615179_+\|hemerythrin-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP031699.1\|WP_123794988.1\|636497_637439_+\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	5.02366e-37
NZ_CP031699.1\|WP_123794975.1\|620260_620806_+\|crossover-junction-endodeoxyribonuclease-RuvC	gnl\|CDD\|234587	PRK00039, ruvC, Holliday junction resolvase; Reviewed.	1.59622e-84
NZ_CP031699.1\|WP_123794976.1\|620865_621633_+\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	2.87348e-94
NZ_CP031699.1\|WP_123794978.1\|624812_627500_-\|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase	gnl\|CDD\|236836	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase.	0
NZ_CP031699.1\|WP_123794979.1\|627811_628825_+\|tRNA-dihydrouridine(20/20a)-synthase-DusA	gnl\|CDD\|236991	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA.	0
NZ_CP031699.1\|WP_123794973.1\|616860_617742_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	gnl\|CDD\|237820	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	1.29479e-86
NZ_CP031699.1\|WP_123794984.1\|631743_632592_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	8.64657e-149
NZ_CP031699.1\|WP_123795148.1\|621780_622650_+\|lipid-A-biosynthesis-lauroyl-acyltransferase	gnl\|CDD\|169557	PRK08706, PRK08706, lipid A biosynthesis lauroyl acyltransferase; Provisional.	5.07794e-172
NZ_CP031699.1\|WP_123794982.1\|630047_630980_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	5.45831e-176
NZ_CP031699.1\|WP_123794977.1\|623397_624192_+\|3'-5'-exonuclease	gnl\|CDD\|378396	pfam10108, DNA_pol_B_exo2, Predicted 3'-5' exonuclease related to the exonuclease domain of PolB. This domain is found in various prokaryotic 3'-5' exonucleases and hypothetical proteins.	7.45509e-127
NZ_CP031699.1\|WP_123794974.1\|618441_619950_-\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP031699.1\|WP_123794972.1\|615396_616554_+\|NnrS-family-protein	gnl\|CDD\|225754	COG3213, NnrS, Uncharacterized protein involved in response to NO [Inorganic ion transport and metabolism].	7.0805e-99
NZ_CP031699.1\|WP_123794987.1\|635028_636366_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0

>NZ_CP031699.1|WP_123794978.1|624812_627500_-|bifunctional-[glutamate--ammonia-ligase]-adenylyl-L-tyrosine-phosphorylase/[glutamate--ammonia-ligase]-adenylyltransferase
MTILDTARRYSQYLARHLDNGNLKPEIFLPMLEKELTLDDFQAFADWEKIRAEEDEETLARQLRLLRRYVVSQIIVRDVNRISSLEEVTRTITLFADFAVNTALEFAYAYYQGLYGTPVGRYTQTPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESGATDGRRERENQEFFTKVGQKLITLLNDITADGQVFRVDMRLRPDGDSGPLVLSETALEQYLIQQGREWERYAWCKGRVVTPYPNDIAALVRPFVFRKYLDYSAYEGMRRLHRQIRDEVSRKGMANNVKLGAGGIREVEFVAQIFQMIRGGQVRALQLKGTRETLHKLAELEIMPAEQVEMLLSAYCFLRDVEHRLQYWDDRQTQTLPENPEQQQLLAESMGFADYAAFTDGLNAHRRQVNKLFNDILSEPEDADEAAGHEWQWVWQDTLDEEERSGRLQNAGFDAEAVVGRLNQIRHGNKYRHLSAHAQPRFDAAVPRLVQAAAMQDNPTGTLLRLLDFLEHISRRSAYLAFLNEHPQTLQHLAEIMGQSEWVAGYLTRYPILLDELISTQLLETHFDWPKLAAELADGMNNCNGDTEAQMDVLRHFQHAQIFRLAVQDLAGLWTVESLSDELSLLADTVIAAALPYVWADMPKKHREQPLFAVTGYGKLGGKELGYASDLDLVYVYDDPHPDAPDVYTRFARRLTSWLSTATGAGTLYEVDLRLRPNGDSGFLAHSMAAFEKYQRENAWTWEHQSLTRARFICGAENMQTAFDRIRSEVLTAERDSEELAREIIEMREKMFATHPPADSDVKYARGGVVDVEFIVQYLILAYARRYPELLDNYGNIALLGIAADCGLIDKELAEQCRTAYRCYRQQQHHAKLRDAAVVADTLTEHYQYVRRLWAEVFGEEVRFSAA
>NZ_CP031699.1|WP_123794977.1|623397_624192_+|3'-5'-exonuclease
MTPILAFDIETVPDVHGIRLLYDLPADVPDNDVVLFAQQKRRAQTGGDFMQHHLHQVVAISCCMRWGSEKIHVGTIGEPNDSEETVIAKFFELVENHTPQLVSWNGGGFDLPVLHYRALIHGIAAARYWDMGEGDFGDSRDFKWNNYISRYHNRHCDLMDLLALYQPRASVPLDDMAKLCGFPGKLGMDGSKVWEAYHQGRLKDIRDYCETDAANTYLMYLRFRLMSGALDGDEYEVEVKRLKNYLKEQAESKQHWREFIAAWR
>NZ_CP031699.1|WP_123795148.1|621780_622650_+|lipid-A-biosynthesis-lauroyl-acyltransferase
MKFAFFLLYLIQLLPFKLLHRIADSIGILAYYAVKPRRKVGETNLRKCFPEWSEAQRKAVLKRHFQHMGKLLFEYGLYWYAPAERLRKFVRYQDKHHLDNALAAGEKVILLYPHFTAFEMAVYTLNQDIPLTSMYSHQKNKAMDEQILKGRHRYDNVFLIGRTEGLRAIIKHLRKSDAPFLYLPDQDFGRNDSIFVNFFGIQTATITGLSRIAALTGAKVIPAIPFREADNTVTLRFYPAWEHFPGEDITADTQRMNDFIEARIREIPEQYFWLHKRFKTRPEGEAGFY
>NZ_CP031699.1|WP_162842961.1|621629_621779_-|hypothetical-protein
MVFGKKRALGREWGGKGRLQTGMRPMLRLQEACAEAVQQFADGMGGRSG
>NZ_CP031699.1|WP_123794976.1|620865_621633_+|NADPH-dependent-oxidoreductase
MNETIQTLLQHRSIRKFKPQPLDKATIDLLVEVAQRASTSSYMQACTIISVTDETIKHELAVLGMQEYVRDNGHLFIFVADTARNSAIAETQGLDPVYQSSADRFLAGVYDCAIAAQNMVAAAESMGLGAVYLGTILNDAAKVIELLGLPPRTFPVFGLALGYPEFQPRLKPRLPSAIVHMENRYVPVTETAQQQALAEYDAEMAEYYSKRGSGSREETFSRMAGKYTHTQQAKRTQLGKLIRQQGFFTELDNQD
>NZ_CP031699.1|WP_123794975.1|620260_620806_+|crossover-junction-endodeoxyribonuclease-RuvC
MNIPKTTRILGIDPGSRVTGFGVIDVCGREHFYVASGCIKTIPGDELAGRIAIICEHIGEIIDTYRPNHAAVEQVFVNVNPAATLMLGQARGAAIAALTMRGLPVYEYTALQVKQAVVGQGKAAKEQVQHMVVRMLGLSGTPQADAADGLAVALTHALRNHGLAAQLNPNGMQIKRGRFQG
>NZ_CP031699.1|WP_123794974.1|618441_619950_-|catalase
MNKCPVTHLTMSNGAPVADNQNSLTAGSRGPLLAQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAKIFSQVGKKTEMFARFTTVAGERGAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPHTNMRSATNNWDFWTLLPEAFHQVTIVMSDRGIPKSYRHMHGFGSHTYSFWNEAGERFWVKFHFRTRQGIENLSNEEAEKIIGQDRESHQKDLYEAIERGDFPKWTMYVQVMPEADAEKVPYHPFDLTKVWPKKDYPLIEVGEFELNKNPENFFADVEQSAFAPSNLVPGIGASPDKMLQARLFNYADAQRYRLGVNRNQIPVNAPRCPVHSNARDGQGRVDGNYGSTLHYEPNSYQQWQEQPQFAEPPLKINGDAAHWNYREDDADYFSQPRALFNLMSGKQKQALFDNTAAAMGDAPDFIKYRHIRNCVKCDPAYGEGVAKALGLTVADAEAARATDPAQGNPGLL
>NZ_CP031699.1|WP_123794973.1|616860_617742_-|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein
MSVSLPLKHITLIGVGLIGGSFVLDLKRLGLVERVAGVDLSRDNLERALERKVIDEAFTEISEASIGNADLVLIATPVSTLPQICRAIKPFLRQDTLVSDVGSTKQSALAAFESYLPEFLPNCIATHPIAGSDRHGALAAQFGLYQDKKLIITPHGREQAGGIERVEALWQAVGAKTFRMSAAEHDAIFAAVSHLPHLLAFAFVHEMFDHPDGQRFLQFAASGFRDFTRIASSHPAIWTDICMANKNSLLGLLSGVEAQLAVLRDMLEKGDTAALYRYFEEAKNTRDEWLKGQ
>NZ_CP031699.1|WP_123794972.1|615396_616554_+|NnrS-family-protein
MTSLLKHPVWAMAFRPFYSLAALYGALSVLLWGFGYRGTPELPNFFWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGKALIGLTVFWLLARICVFIPGWGAAAGGVFGTIFFWYAAVCMALPVFRTQNKRNYVAVFAIFVLGGTHLMFHRQLAQFDAQSMLEGLQAGLMMVAGFIGLVGMRIISFFTAKRLNVPQIASPQWVGHASLWLPMIAAMLMAHQILLPLAALAAFAAGIISMVQVYRWWYPAVLKEPMLWILFAGYFFTGLGLSATGLAYWFPSYLSLGIHLIGVGGIGVLTLGMMARTALGHTGNAIYPPPKSVPVAFWLMIAATLVRAFAAFASGTAYTHSIRTSAVLFAAALLVYAWRYIPWLLRPRADGKPG
>NZ_CP031699.1|WP_123794971.1|614801_615179_+|hemerythrin-domain-containing-protein
MKPLKRHSALIELSREHHHSLALCLRILRAPSESHQAEIEPHAAELAVHFQEEEQQFAPYWAHIDPALRERFENDHAKLRGMMAEPRYTDEAWNTDFATTLREHARFEERELFPAVEPYLPEASA
>NZ_CP031699.1|WP_123794979.1|627811_628825_+|tRNA-dihydrouridine(20/20a)-synthase-DusA
MHHNDTDYIGTRRLSVAPMLDWTDRHYRYMARQITRHTWLYSEMVNAGAINYGDKDRFLMFNEGEQPVALQLGGSEPSELARAAKTAEQYGYNEINLNCGCPSPRVQKGAFGACLMNEADLVADCLNAMQDAVNIPVTVKHRIGIDRQTEYQVVADFVGTLRGKTACKTFIVHARNAWLDGLSPKENRDIPPLKYDYVYRLKQEFPDLEIIINGGITTNEQIAEHLNHVDGVMIGREAYHNPMMMRDWDSLFYGDTATPVAYQDLVQRLFAYSQAQIRAGRGTTLRHIVRHSLGLMHGLNKARVWRRMLSDAALLKDNDGSLILEAWKEVEQANRWD
>NZ_CP031699.1|WP_123794980.1|628853_629078_+|hypothetical-protein
MAAQQAAYGLTAPYLLMRHAVIFTSGIFQTAAAASDSITAPCSTTNFIKLPQKPSAKCCLQLEPETFAKLIIVI
>NZ_CP031699.1|WP_123794981.1|629414_629903_-|prokaryotic-membrane-lipolipid-attachment-site-family-protein
MKKHIPLLVALAALAGCETIYLPTLKEVPVNPTNTRVADIPAADYRLAASHWTDVAKLRDEATRLVSQVSQGKLTKVQAAQLLNRFRIQLVGRNSVDDAVYDVYLRSAIDSQRGVISSEQSKTQIQSTLRGWQQRWKNMDSKPNNPAFTNFLLEYMNMTPLK
>NZ_CP031699.1|WP_123794982.1|630047_630980_-|cysteine-synthase-A
MNIANSITDLIGNTPLVKLNRLTEGLQAQVAVKLEFFNPGNSVKDRIAEAMIDAAEKAGKINKNTVILEATSGNTGIGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMGGAIAKAQALVDEKPDVYFLARQFDNEANPEIHRETTAEEIWRDTDGNVDIFVAGVGTGGTITGVGEVLKQRKPEVQVFAVEPEASPVLSGGEKGPHPIQGIGAGFVPAVLNTKVYDGVIKAPNEAAFETARAMAEKEGILVGISSGAAVWSALQLAKKPENAGKLIVVVIPSYGERYLSTPLFADLA
>NZ_CP031699.1|WP_123794983.1|631141_631744_-|hypothetical-protein
MVADWNVWSAAVYGLIWLLLIFRAGMFQWFWGSVLLWLGVSVLGSRLLLGIWGMTHIGPLMLPHFYLTVASVFFWIDFRQATAEDAAVKPDRRFEWLALFALSNMVMTAAFVLTLGLMWYHYPNGLTLAVLPAMLQFYALQPLDWFVLQAVLMAVFYVHRRLIERRPAYCFSLRQWYAGCLLAFVLQWGCIIGIALDGRM
>NZ_CP031699.1|WP_123794984.1|631743_632592_-|diaminopimelate-epimerase
MKTLKFTKMHGLGNDFVVVDAVNQDFNPLEAPLAQWADRFRGVGFDQLLVVEKPVSDAADFRYRIFNADGGEVEQCGNGARCFVRFVADKGLTDKKEIVVETAGGVIVPKLLDNGLVTVNMGKPRFRPSEIPFVAVAGEADDALTYQVQTGLESVPVSCVNMGNPHAVLLVEDVQRAPVERLGAAIEPNKQFPDRVNVGFMQVVDRQAVRLRVYERGAGETQACGTGACAAVVAGVRLGLLDAGVPVKVTLPGGDLFIEWQPGGHVLMTGPVETVFEGELRY
>NZ_CP031699.1|WP_123794985.1|632866_633349_+|NemA-protein
MKHIIAPVLLTALLSACTATPSGMSVGLGIGSRLGSHIGLGTSLNIPIDFDRRKTGNIDSPNILDEQIITYFDAKGNASNSAVKGGYYRQLLNKRGNDYIVQDFYGDNGRKRTDPYTLSRNQLMQFHALPENGSLTTYAYNGNVMQQQVFQNGRLISAKY
>NZ_CP031699.1|WP_123794986.1|634337_634913_-|hypothetical-protein
MDYSLLMILLLVLLLVLLYLRYRRNHGQPLPLERTGSSVPAVSSWSNGNGEVSAAGDFMQQGMARQTVDSKQNDADYQTALQYYEQAIRQSDKPAARIIDLLSMDYRHRNLQGYAEHLWLLYVELGSSGNEVKERMRVWGSSLGKHSVFDELAKQPSAQRLQEIGRAQGYVRMESIPEDEGLPFTWENDKS
>NZ_CP031699.1|WP_123794987.1|635028_636366_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MQQNQQNSGVAEIYSLDYEGRGVARVGGKTVFVRGALPSEKVRFRVVRSKKQFDEAETTEVLQTANERVEPRCRHFGICGGCVLQHAEATAQVAYKQRIMEEQLARIGKVVPQQLLPPIYGTPWHYRDRARLSISADGKGRLQLGFQAQKSHDVVDIESCAVLPEYVSAALPDWKAVLQTLSDYGDTAKFIEFYRSNEVTLANIGWGKGPSAKSLARLREWFDRHYASAEQCWQIWLQCGREQAQAFYPHHVPQLAYTLPEFDVVMPYRPGDFTQINAETNALMVGRALRLLEIRQGERVADLFCGLGNFSLPMAKCGAKVVGIEGSATLAARATENAAHNGCAAQTEFMVADLFETDRQTLASWGRFDKMLLDPPRSGAYAVVQALHEPYLPQKIVYVSCNPATFARDAAVLVAKGYVLQTAGVMNMFAQTAHVESIGVFERSR
>NZ_CP031699.1|WP_123794988.1|636497_637439_+|L,D-transpeptidase
MKKLFSGIFALGIAAAAHANTPLPDVSPVSEGQHVFINIPQQRLFLYTDGKLTKAYPVAVGKAATQTNLGEHKIGVKAYNPTWHIPKSIQKERGDGVKTIPPGPKNPLGPVFVRLGDPKLGLGIHGTNAPSSVPGVLSHGCVRMKSPDALEFAKTISTGAPASVIYQMATLNEDANKNLWLAAYRDPYKQKNLDTAALKKSIAAWAKANGKTINAKRVDAVLKNRTGAANCLTCAPKVKMKTPLKSLAWNSGSGAYSKPKAVAKPAPVKDETLPDGSGVEVNVGDMLPDSGMSLPRLPIPAGTSADEAVETLF

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Crispr_ID: NZ_CP031699_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP031699_2

1391673-1392434

orTypeII

Consensus_repeat	Method
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	PILER-CR
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	CRISPRCasFinder
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	CRT

11 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP031699_2

>merge|NZ_CP031699|2|1391673-1392434|PILER-CR,CRISPRCasFinder,CRT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAACATTACATCAGCCCGCGCCTTCGTTAACCATATTGTAACACTACGAGATGAGAGAGGGAGCTACAACTGTACATTTTCGCTCCTAAGCCGAGCGTTAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACGCTAACCCTACTTCTTATATAAAGCTTATAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACTGAGCTGCTGGATGCGCTGCGCCGTATGAAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACTGGAGACCTCTCCTACAGCAACCAAAAAATATTGTAACACTACGAGATGAGAGAGGGAGCTACAACTCCTGCCGACTTCTCCTTGGGCATTACTGAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACTAGATGTTTTGCCGGTGCCGGGTGTGCCGGATTGTAACACTACGAGATGAGAGAGGGAGCTACAACGAATTTTTGTTTGAGGCCGAACAAAGCAATATTGTAACACTACGAGATGAGAGAGGGAGCTACAACAAGTCATATATTGCTGAAAACTACTATGTAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACGTACCCCAGCACGGCAGAGGAGGCGTTTCAATTGTAACACTACGAGATGAGAGAGGGAGCTACAACCAAGAAAACAACATACCGACAGGCATACTGATTGTAACACTACGAGATAAGAGCGTTGTAACGTAA

>NZ_CP031699|2|1|1391673-1392368|PILER-CR
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	ATTACATCAGCCCGCGCCTTCGTTAACCAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGTACATTTTCGCTCCTAAGCCGAGCGTTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GCTAACCCTACTTCTTATATAAAGCTTATA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGAGCTGCTGGATGCGCTGCGCCGTATGAA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGGAGACCTCTCCTACAGCAACCAAAAAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TCCTGCCGACTTCTCCTTGGGCATTACTGA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TAGATGTTTTGCCGGTGCCGGGTGTGCCGG
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GAATTTTTGTTTGAGGCCGAACAAAGCAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	AAGTCATATATTGCTGAAAACTACTATGTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GTACCCCAGCACGGCAGAGGAGGCGTTTCA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC

>NZ_CP031699|2|2|1391673-1392368|CRISPRCasFinder
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	ATTACATCAGCCCGCGCCTTCGTTAACCAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGTACATTTTCGCTCCTAAGCCGAGCGTTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GCTAACCCTACTTCTTATATAAAGCTTATA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGAGCTGCTGGATGCGCTGCGCCGTATGAA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGGAGACCTCTCCTACAGCAACCAAAAAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TCCTGCCGACTTCTCCTTGGGCATTACTGA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TAGATGTTTTGCCGGTGCCGGGTGTGCCGG
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GAATTTTTGTTTGAGGCCGAACAAAGCAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	AAGTCATATATTGCTGAAAACTACTATGTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GTACCCCAGCACGGCAGAGGAGGCGTTTCA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC

>NZ_CP031699|2|1|1391673-1392434|CRT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	ATTACATCAGCCCGCGCCTTCGTTAACCAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGTACATTTTCGCTCCTAAGCCGAGCGTTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GCTAACCCTACTTCTTATATAAAGCTTATA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGAGCTGCTGGATGCGCTGCGCCGTATGAA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TGGAGACCTCTCCTACAGCAACCAAAAAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TCCTGCCGACTTCTCCTTGGGCATTACTGA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	TAGATGTTTTGCCGGTGCCGGGTGTGCCGG
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GAATTTTTGTTTGAGGCCGAACAAAGCAAT
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	AAGTCATATATTGCTGAAAACTACTATGTA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	GTACCCCAGCACGGCAGAGGAGGCGTTTCA
ATTGTAACACTACGAGATGAGAGAGGGAGCTACAAC	CAAGAAAACAACATACCGACAGGCATACTG
ATTGTAACACTACGAGATAAGAGCGTTGTAACGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP031699.1\|WP_123795632.1\|1378079_1378562_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP031699.1\|WP_123795627.1\|1382508_1383663_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP031699.1\|WP_123795618.1\|1397958_1399050_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP031699.1\|WP_123795614.1\|1402015_1402267_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	unknown	unknown	gnl\|CDD\|171099
NZ_CP031699.1\|WP_123795622.1\|1392551_1394117_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP031699.1\|WP_123795624.1\|1390378_1391290_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP031699.1\|WP_123795629.1\|1381066_1381756_+\|aspartate/glutamate-racemase-family-protein	unknown	unknown	gnl\|CDD\|224707
NZ_CP031699.1\|WP_123795620.1\|1395365_1396382_+\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|224394
NZ_CP031699.1\|WP_162842987.1\|1399117_1400416_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP031699.1\|WP_123795630.1\|1380373_1380757_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP031699.1\|WP_123795616.1\|1400746_1401577_+\|CoA-ester-lyase	unknown	unknown	gnl\|CDD\|225184
NZ_CP031699.1\|WP_123795625.1\|1387089_1390314_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP031699.1\|WP_123795619.1\|1396489_1397923_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|224938
NZ_CP031699.1\|WP_123795631.1\|1379166_1380267_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP031699.1\|WP_123795626.1\|1383760_1386619_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP031699.1\|WP_123795628.1\|1381762_1382296_+\|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl\|CDD\|225374
NZ_CP031699.1\|WP_123795615.1\|1401758_1402019_-\|Txe/YoeB-family-addiction-module-toxin	unknown	unknown	gnl\|CDD\|284238
NZ_CP031699.1\|WP_162842981.1\|1394279_1394432_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123795621.1\|1394853_1395192_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP031699.1\|WP_123795623.1\|1391282_1391609_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043

Protein	Function_ID	Function_description	E-value
NZ_CP031699.1\|WP_123795632.1\|1378079_1378562_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	2.89908e-54
NZ_CP031699.1\|WP_123795627.1\|1382508_1383663_+\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.2661e-54
NZ_CP031699.1\|WP_123795618.1\|1397958_1399050_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP031699.1\|WP_123795614.1\|1402015_1402267_-\|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin	gnl\|CDD\|171099	PRK11409, PRK11409, YoeB-YefM toxin-antitoxin system antitoxin YefM.	1.00479e-19
NZ_CP031699.1\|WP_123795622.1\|1392551_1394117_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP031699.1\|WP_123795624.1\|1390378_1391290_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.97537e-125
NZ_CP031699.1\|WP_123795629.1\|1381066_1381756_+\|aspartate/glutamate-racemase-family-protein	gnl\|CDD\|224707	COG1794, RacX, Aspartate racemase [Cell envelope biogenesis, outer membrane].	2.24375e-103
NZ_CP031699.1\|WP_123795620.1\|1395365_1396382_+\|FAD:protein-FMN-transferase	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	1.15306e-69
NZ_CP031699.1\|WP_162842987.1\|1399117_1400416_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP031699.1\|WP_123795630.1\|1380373_1380757_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.58867e-72
NZ_CP031699.1\|WP_123795616.1\|1400746_1401577_+\|CoA-ester-lyase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	5.78422e-56
NZ_CP031699.1\|WP_123795625.1\|1387089_1390314_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP031699.1\|WP_123795619.1\|1396489_1397923_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|224938	COG2027, DacB, D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) [Cell envelope biogenesis, outer membrane].	1.97385e-97
NZ_CP031699.1\|WP_123795631.1\|1379166_1380267_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP031699.1\|WP_123795626.1\|1383760_1386619_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP031699.1\|WP_123795628.1\|1381762_1382296_+\|DNA-3-methyladenine-glycosylase-I	gnl\|CDD\|225374	COG2818, Tag, 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair].	1.42101e-62
NZ_CP031699.1\|WP_123795615.1\|1401758_1402019_-\|Txe/YoeB-family-addiction-module-toxin	gnl\|CDD\|284238	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system. YoeB_toxin is a family of bacterial toxins that forms one component of the type II toxin-antitoxin system in E. coli whose antitoxin is represented by YefM, found in pfam02604. The plasmid encoded Axe-Txe proteins in Enterococcus faecium act as an antitoxin-toxin pair. When the plasmid is lost, the antitoxin is degraded relatively quickly by host enzymes. This allows the toxin to interact with its intracellular target, thus killing the cell or impeding cell growth. These toxins are highly potent protein synthesis inhibitors, specifically blocking the initiation of translation. In the case of YoeB, it binds to the 50 S ribosomal subunit in 70 S ribosomes and interacts with the A site leading to mRNA cleavage at this site. As a result, the 3'-end portion of the mRNA is released from ribosomes, and translation initiation is effectively inhibited.	1.23873e-39
NZ_CP031699.1\|WP_123795623.1\|1391282_1391609_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	8.12112e-52

>NZ_CP031699.1|WP_123795623.1|1391282_1391609_+|CRISPR-associated-endonuclease-Cas2
MSEAQFMRLIVFFDLPVTTAAKRKAANRFRKFLQKDGYQMLQLSVYSRIVRGRDALQKHHKRLLQQLPEEGQVRYLEVTEKQYAGMVMLIGEPKTREKKVNADQLLLF
>NZ_CP031699.1|WP_123795624.1|1390378_1391290_+|type-II-CRISPR-associated-endonuclease-Cas1
MTWRSILISKPARLSLQQNHLLIRQDEAIPVPLEDIAVIVVESREVVLTAPLLSALAQYGVTLLTCDEQFLPCGQWLPFAQYHRSLKILKLQIHMTQPQKKQLWQRIVQQKIRNQAWLLDYSGHDIGAGRLNALADEVKSGDKGYAEGQAAALYFPLLFGDAFTRSQENAVNACLNYGYSIVRSAVARALVQYGFLPALGLQHKSELNAFNLADDFIEPYRQIVDLLVYDAVCAQSLPETLTPETKLRLVGLLCCQIMLDKRRYSLLAAIDRTIQSLQTALTENNPKLLKLPQMLPLKEHDYE
>NZ_CP031699.1|WP_123795625.1|1387089_1390314_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MGAYPQKYILGLDLGIASVGWALVSVDENENPNGLLDCGVRTFERAEVPKTGDSLAKARREARSVRRLIRRRAHRLLRLRRLLKREGVLAAADFDSNGLVRDLPVDAWPLRVAGLDRKLEAKEWAAVLLHLVKHRGYLSQRKSEMQTEDKELGRLLAGVAENSKLLQQDAYRTPAELAVKHFAVQNGHMRNKGGDYSHTFNRQDLQRELHLLFEKQRGFGNPFAAAELENRVDTLLMTQRSALQGEAVLKMLGKCTFEPAEYKAAKHTYSAERFVWLTKLNNLRVLHNGEERALEEAERKMLLDEPYKKAKFTYTQARKLLDMPADAAFKGLRYGKDSDGLKAENGTLMEMKAYHKIRQVLEKAGLKTEWQGLACKPDLLDEIGTVFSLYKTDEDISSCLKDKLPENVLQALLAGLNFDKFIQLSLKALSQIMPLMENGMRYDKACEAVYGDHYGLKKKEENLLLPRIAADDIRNPVVFRTLTQTRKVVNAIIRRYGSPQRVHIETARELGKSYKDRKEIEKRQEENRKERERAAADFKELFPNFVGEPKGQDILKLRLYKQQQCKCLYSGAEIDLRRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQKKRNQTPYEYLDGASNSQRWREFQARVAGCGFPYAKKQRIQTAKLDSKAEQGFLERNLNDTRYIARFLCNFIEENLHLEGSGKRRVFASNGQITSLLRGLWGLRKVREDNDRHHALDAVVVACSTVSMQQKITKAMQRRETLETVDTETGEVKQRIPQPWDFFRQEVMIRVFSDQPHEELAEKLDSRPQALHEHVTPLFVSRAPNRKMTGQGHLETIKSAKRLSEKISVVKKPLTQLKSKDIENIVGYPNREPALYAALRERLAAHKDDPVKAFAEPFYKPAKDGGKGALVKAVRVEDVQKTGVMVRKDRQGIARGIADNATMIRVDVFGKNGKNYLVPIYAWQIAKGILPNKAVVQGKDEADWDVMDESYAFKFTLYPNDLVEVISKKGRIFGYFGGLDRATGNINVKEHDMAKNKGKEGVHRSLGVKTVLSFQKYQIDPLGKEIRLCKAERRLELKNKK
>NZ_CP031699.1|WP_123795626.1|1383760_1386619_+|aminomethyl-transferring-glycine-dehydrogenase
MKLHDLLDSNSFAPRHISFGDEAALLKALGEKNMEEFISNTVPQSIRMPSELDLPKALSETEALAKLKETASKNLIAKSYIGLGYYPTRMPNVILRNVLENPGWYTAYTPYQAEIAQGRLEALLNFQQMTIDLTGLPVAGASLLDEATAAAEAMAMAKRVGKVKSDKFFVDDRVLPQTLDVMKTRAKYFGFELVVGDAKKAGNGKTEYFGALLQYVGKDGDVFDLKTRIAKLKDKGTVVAVAADIMSLVLLKSPGEIGADIALGSTQRFGIPMGFGGPHAAYFAFKDEYKRSAPGRIIGVSKDTSGKPALRMALSTREQHIRREKATSNICTAQALLANLAGMYAVYHGPQGLKRIAERIHVLASAFGNLLADAGLELVYDTYFDTVAVDLKDKTRADEVFYTAQKWGYNLRRVSDTVIAVAFHEESERGELAVLYALFTGKEQVLLENDVTGRLKKSLLRKDDILTHEVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNATSEMLPVTWPEFANIHPFAPLNQVQGYMEMLGGLKAQLKAITGFDEISIQPNSGAQGEYTGLLSIRRYHEADGAAGRDVCLIPQSAHGTNPATAAMLGMKVVVVKTDERGNVDVADLKAKAEQYRDTLGALMITYPSTHGVYEEGIRDICKIIHDNGGQVYMDGANMNAQVGIMQPAEVGADVLHMNLHKTFCIPHGGGGPGMGCIGLKAHLAPFAPSHTVTPVAGATEGMGAVAAAPYGSASILPITWMYITMMGKQGMKQATEWALLNANYVAKQLGEDYPILYTGKNGRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKAELDRFIAALKSIRREVQKVQDGVWPKDDNPLVNAPHTAADLTKEWMHPYSREEAVFPLPYVREHKFWPSVNRVDDVYGDRNLICTCPPVEAYED
>NZ_CP031699.1|WP_123795627.1|1382508_1383663_+|MFS-transporter
MKPSSLLKAAVFIIGMSAFIQVYSVQAVLPVLMADLRATEVQAGLAVGAAVLGVALMSPFMGMLSDAFGRKIFITASLLYLSLPTALLAFSADIHQMIALRFLQGLAVPGITVVLIAYIGEEFETGDVARLMAVYVSGTVFGGFMGRFLLGYLSEWAGWRGAFGVMAAVSLACALFVWQQLPKSQHFTAKPDFQTAFATLKSHVRNRYVVSASLLGMCVLCSLVGCFTYINLHLAGPPYRLNSSELADIFTVYLIGMVITPLSARLMARFGSVKTIVLAVCLSMAGVAITLSAPLAAVVVGLVLMSSGVFVTQAATINYIAAHVKQGRSLASGLYYMAYYSGGTIGALLCGLAYTGGQWSGVVYTLLAVQAAALLVAVKGMKAV
>NZ_CP031699.1|WP_123795628.1|1381762_1382296_+|DNA-3-methyladenine-glycosylase-I
MTTYCRFAAALPDDTDNPNKHYHDNVYGFPVYDDNELFGRLVLEINQAGLSWTIILKKQTAFQTAYKGFDIAAVAAFDGEDRARLLADAGIVRNRLKINAAIHNAQQILAIQKEYGSFKNWLDSHHPQDKASWVKLFKKRFKFVGGEIVGEFLMSTGYLPGAHDEDCPVRARIAEAV
>NZ_CP031699.1|WP_123795629.1|1381066_1381756_+|aspartate/glutamate-racemase-family-protein
MKTIGIIGGMSPESTVLYYQTINREVNARLGGNRSADIFMHSIDFETVAAMQRAGDWAAAGRLLAESGRKLEKMGAQALVLATNTMHKVASDIESAVGIPLIHVVDSTAVAVKQQGLAKVGLLGTKFTMSDGFYSERMAQAGIGTLMPSAKEQNEIHRIIFEELCRNRIEHASRDYYYRAIEALKQAGAEGVVLGCTEIGLLVKAEECPLPVFDSAEIHAMAAVEFILS
>NZ_CP031699.1|WP_123795630.1|1380373_1380757_+|glycine-cleavage-system-protein-GcvH
MSNIPAELKYVASHEWLRPEADGSVTVGITHHAQELLGDIVFVELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVLAVNEELPSAPETANSDPYGAGWFFKIKPANPADLDGLLTAEQYAEEVK
>NZ_CP031699.1|WP_123795631.1|1379166_1380267_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MSALKTTPFHQAHLDAGGKLVDFAGWELPVNYGSQITEHEAVRTDAGMFDVSHMLVTDVTGDQAKAFFRKLLANDVSKLPFVGKALYSAMLNDNGGVIDDLIVYRTNEAETQYRIVSNGATREKDSAQFAKVGADFGIALNPRYDLGMLAVQGPKAVEKLLAVKPEWADTVNALKPFQGADLGGDWFVARTGYTGEDGVEVILPAAEAEAFFKALQTAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDETRDFVGKAALLALKEKGVAVKQVGLLLDKGGILRSHMEVLTDKGRGITTSGVFSPSLKQSIAIARVPKDFDGDVAKVLIRGKEVGVRVLKLPFVRNGQKQFD
>NZ_CP031699.1|WP_123795632.1|1378079_1378562_-|Lrp/AsnC-family-transcriptional-regulator
MPQITLDKTDLKILQVLQENGRLTNVELSERVALSPSPCLRRLKQLEDAGIIRKYAALLSPVEVELGLQAFIRVAISKAKDAREDFSNAVQTWPEVLSCFALTGETDYLLHAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKNTTALPLAHLQKD
>NZ_CP031699.1|WP_123795622.1|1392551_1394117_-|glutamine-hydrolyzing-GMP-synthase
MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLAEIKAFKPKAIILSGGPNSVYDSDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVSPGNQREFGYAQVKTIDCELTRGLADGQPNTLDVWMSHGDKVSKLPEGFAVIGDTPSCPIAMMEHAEKQFYGIQFHPEVTHTKQGRALINRFVLDIAGAKPSWTMPNYIDEAVAKIREQVGSDEVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVRVIHVDAEAQFMNKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIESAGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHPFPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPVKSVGVMGDGRTYDYVVALRAVVTSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVYDVSGKPPATIEWE
>NZ_CP031699.1|WP_162842981.1|1394279_1394432_+|hypothetical-protein
MRENLQTGKKKQPAGLGGLFERIGAVLRGLFGCNFFGKGADTNRQARFLF
>NZ_CP031699.1|WP_123795621.1|1394853_1395192_-|hypothetical-protein
MPQASLALPLFLILFGAVWFLKTTGVLPATATLVAAGVAIAGIAVMVMDGINKQSIVSGPMLVYIGAAIYLRTEYWFGYSPLIALGMMVLGILLLLSRSSIVPHKQYRKIND
>NZ_CP031699.1|WP_123795620.1|1395365_1396382_+|FAD:protein-FMN-transferase
MNIPLTRRRFFALAAVTASAVAVPLWFSGRERPSAKQQADGGQDFVAWQGIALGSGAQIRLYHEDHAFAEAVIRKALAEVARLEKIFSLYREDSEISRLNREGRLHYPSTDMLAVLSLAGRLYRLTDGAFDPSIQPLWNAYADFFRRNPDAVTPPPETEVNRALRLVGFDKVAFDSQAVTFAERGMGLSLNGIAQGYITDKTVELLRKSGIRQALVDMGEIRGLDTLGQRTWQVGIKNPQDETDVLLTVPLQNEGFATSGGYGTVFNAAETFTHLFDPRTGGAQPRYRSISVMAESAAVADALATAFAIMDETEIRRAAEAERAKVWLVDKTGKLMQV
>NZ_CP031699.1|WP_123795619.1|1396489_1397923_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MNIPSRFAAWLLCAVSFSATALDLGNIPAGEISVYVKELDSGKIVESHRADAAVNPASAMKLVTAYAAFRALGQDYRWHTDWLGDGEIKDGTLSGNLYWAGSGNPVLQQEDLAVVQQQLRNAGVRNIEGGLVLDRSLWGSVPNSPDFAADEGKSYMIPPDPNMLAYKVVWLMPERDSEGRVVVRTKPQLPEIPLDNRISIVPYAAAECSSLRRYMKAEYAVGVLRVSGRLPESCLGQEMFVNMLGAEEFAYRSFTNLWRWSGGQIADGLQTGDTPPEARLLVRHFSPPLKDMLTEMNKHSSNLIARSVYLKLGGSEDVQTALAQAETVVRRELALSGVDSSELVLENGSGLSRKERVTAEMLGQMLEKAYFSPFKEAFIRTLPIAGADGTLKDRLSAAGPSLRLKTGTLKNVRALAGYWLGEKPMAVVVIINSPNADYYLESMDKLIESLVPKQPKPSANPPEQPASAAVHNKPDML
>NZ_CP031699.1|WP_123795618.1|1397958_1399050_+|redox-regulated-ATPase-YchF
MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIVEVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVNVVRCFDDDNIVHVAGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQKLVDLCKKLLPHLDEGKPVRSFGLDAEELAMLRPLFLLTAKPAMYVGNVAEDGFENNPHLDRLKELAAKENAPVVAVCAAMESEIAELDDDEKAEFLAEMGLEEPGLNRLIRAGYDLLGLQTYFTAGVKEVRAWTIRKGDTAPQAAGVIHTDFERGFIRAQVIAYEDFVSLGGEAKAKEAGKMRVEGKEYVVKDGDVMHFLFNV
>NZ_CP031699.1|WP_162842987.1|1399117_1400416_+|tyrosine--tRNA-ligase
MMSVIQDLQARGLIAQTTDIEALDALLNGQKIALYCGFDPTADSLHIGHLLPVLALRRFQQAGHTPVALVGGATGMIGDPSFKAVERSLNTPETVQSWVASIRAQLEPFLSFEGDNAAVMANNYDWFGGMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRDDVGISFTEFAYTLLQSYDFAELNKRHGAMLQIGGSDQWGNITNGIDLTRRLNQKQVFGLTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSVEEIDAIEAKDQASGTKPEAQRILAEEMTRLIHGEAALEAAQRISASLFAEDQSNLTEADFEQLALDGLPAFEVSGSVNVVEALVLSGLAQSNKEARGFVNSKAVVLNGKAAEANNPDHAPEKPDDAYLLADEHKRFGKYTIVRRGKRNHALLVWK
>NZ_CP031699.1|WP_123795616.1|1400746_1401577_+|CoA-ester-lyase
MLRPIIPKIFLFVPANRPDRFEKAWASGADEVVLDWEDTVASADKAAARAHTAAYGRQEDSRPVWVRVNAANSPHHAEDIAAVAALPQIKGVILAKAENADGITTLHWQTGRAVVAGIETAQGMMAIPSMAQAEGLFAFTYGCLDLANDLGIRFGSTSAQAVFDRLRTDLLLYSRVNRLHPPLETTFPEFNDEAAIARNTVYWRDFGFGGVLCIHPKQVAAVRSALRPTAAELVFARKILERADLDGKAVFQVDGQMVDLPVIEWARSMVGKAEHD
>NZ_CP031699.1|WP_123795615.1|1401758_1402019_-|Txe/YoeB-family-addiction-module-toxin
MMLHFTDDAWEDYQYWLQTDKAVLKRINTIIQDMQRNPFDGIGKPEPLRHSLSGYYSRRINQEHRIVYRADDSGIWLISLRFHYSG
>NZ_CP031699.1|WP_123795614.1|1402015_1402267_-|type-II-toxin-antitoxin-system-prevent-host-death-family-antitoxin
MYAVHASDFRKNMAATLDRVADNAEPVLITRSGASAAVLLDINEYNALIETAYLLSNPAMAARLAKGIAEVEAGKTSIRELVE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	15808-15837	5	0.833
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP021917	Sagittula sp. P11 plasmid unnamed4, complete sequence	10833-10862	6	0.8
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	889650-889679	6	0.8
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	923476-923505	6	0.8
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_008697	Nocardioides sp. JS614 plasmid pNOCA01, complete sequence	71341-71370	6	0.8
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_004633	Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete sequence	56986-57015	6	0.8
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_004632	Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence	52601-52630	6	0.8
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	490125-490154	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	479692-479721	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	1518133-1518162	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	118269-118298	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	490163-490192	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	490162-490191	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	490154-490183	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP021374	Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence	290914-290943	7	0.767
NZ_CP031699_2	2.5\|1391973\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391973-1392002	30	NZ_AP018719	Sterolibacteriaceae bacterium J5B plasmid pSTJ1, complete sequence	125762-125791	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP045326	Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence	78306-78335	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP049358	Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence	306050-306079	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP007144	Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence	220651-220680	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP013265	Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence	61291-61320	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP014580	Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence	27556-27585	7	0.767
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_015579	Novosphingobium sp. PP1Y plasmid Lpl, complete sequence	124333-124362	7	0.767
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	466572-466601	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	465781-465810	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	479091-479120	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	283340-283369	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	221148-221177	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	384182-384211	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	479093-479122	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP048282	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence	338840-338869	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	315616-315645	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	659443-659472	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	629740-629769	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	384169-384198	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1820068-1820097	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP043499	Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence	1003650-1003679	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1473669-1473698	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	253466-253495	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1455177-1455206	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	MT711976	Streptomyces phage Coruscant, complete genome	83841-83870	8	0.733
NZ_CP031699_2	2.6\|1392039\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392039-1392068	30	NZ_AP018720	Sterolibacteriaceae bacterium J5B plasmid pSTJ2, complete sequence	37036-37065	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP014310	Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence	365686-365715	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP017078	Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence	114897-114926	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP020740	[Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence	111965-111994	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_023285	Streptomyces sp. F8 plasmid pFRL5, complete sequence	83266-83295	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	JF974300	Synechococcus phage S-CBP42, * SEQUENCING IN PROGRESS *, 8 unordered pieces	39396-39425	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	506807-506836	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_CP021407	Celeribacter manganoxidans strain DY25 plasmid pDY25-C, complete sequence	36976-37005	8	0.733
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	KC310805	Synechococcus phage S-CBP42, complete genome	656-685	8	0.733
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	80249-80278	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1569599-1569628	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	506710-506739	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	551319-551348	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	55397-55426	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	22636-22665	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	385357-385386	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	221486-221515	9	0.7
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NC_007950	Polaromonas sp. JS666 plasmid 2, complete sequence	105080-105109	9	0.7
NZ_CP031699_2	2.7\|1392105\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1392105-1392134	30	NZ_AP022611	Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574	23253-23282	9	0.7
NZ_CP031699_2	2.11\|1392369\|30\|NZ_CP031699\|CRT	1392369-1392398	30	JF270478	Psychrobacter phage Psymv2, complete genome	2312-2341	9	0.7
NZ_CP031699_2	2.4\|1391907\|30\|NZ_CP031699\|PILER-CR,CRISPRCasFinder,CRT	1391907-1391936	30	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	378899-378928	10	0.667

1. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 5, identity: 0.833

tagatg--ttttgccggtgccgggtgtgccgg	CRISPR spacer
--gatggcttttgccggtgccggggttgccgc	Protospacer
  ****  ****************  *****

2. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021917 (Sagittula sp. P11 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

tgagctgctggatgcgctgcgccg-tatgaa	CRISPR spacer
cgaggtgctggatgcgctgcaccgctacgc-	Protospacer
.*** ***************.*** **.*

3. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 6, identity: 0.8

tgagctgctggatgcgctgcgcc-gtatgaa	CRISPR spacer
ggagctgccggacgcgctgcgccggtacgg-	Protospacer
 *******.***.********** ***.*.

4. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 6, identity: 0.8

tgagctgctggatgcgctgcgcc-gtatgaa	CRISPR spacer
ggagctgccggacgcgctgcgccggtacgg-	Protospacer
 *******.***.********** ***.*.

5. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 6, identity: 0.8

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
gataggtcttgccggtgccgggtgggccgt	Protospacer
 * * **.**************** ****

6. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_004633 (Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A, complete sequence) position: , mismatch: 6, identity: 0.8

tagatg--ttttgccggtgccgggtgtgccgg	CRISPR spacer
--gctggcttttgccggtgccggcggtgccga	Protospacer
  * **  ***************  ******.

7. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_004632 (Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B, complete sequence) position: , mismatch: 6, identity: 0.8

tagatg--ttttgccggtgccgggtgtgccgg	CRISPR spacer
--gctggcttttgccggtgccggcggtgccga	Protospacer
  * **  ***************  ******.

8. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
agcgctgctggttgcgctgcgccggctgct	Protospacer
 * ******** ************  **

9. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
agcgctgctggttgcgctgcgccggctgct	Protospacer
 * ******** ************  **

10. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
cgagctgctcgatgcgcagcgccgcctgcg	Protospacer
.******** ******* ******. ** .

11. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
tgtgctgctggatgcgccgcgccacatcct	Protospacer
** **************.*****..**

12. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
agcgctgctggttgcgctgcgccggctgct	Protospacer
 * ******** ************  **

13. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
agcgctgctggttgcgctgcgccggctgct	Protospacer
 * ******** ************  **

14. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
agcgctgctggttgcgctgcgccggctgct	Protospacer
 * ******** ************  **

15. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021374 (Rhizobium sp. ACO-34A plasmid pRACO34Ab, complete sequence) position: , mismatch: 7, identity: 0.767

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
tcaggctctggatgagctgcgccgtatgct	Protospacer
* ** . ******* *************

16. spacer 2.5|1391973|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018719 (Sterolibacteriaceae bacterium J5B plasmid pSTJ1, complete sequence) position: , mismatch: 7, identity: 0.767

tggagacctctcctacagcaaccaaaaaat	CRISPR spacer
acgagacctctccttcagcaaccgaagaca	Protospacer
  ************ ********.**.*

17. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045326 (Mycobacterium sp. THAF192 plasmid pTHAF192_a, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
ggtgggttttgccggtgccgggtgggccga	Protospacer
 . . ******************* ****.

18. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049358 (Deinococcus wulumuqiensis R12 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
gcagcgtcttgccggtgccgggtgcgccgg	Protospacer
  ...**.****************.*****

19. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007144 (Hymenobacter swuensis DY53 plasmid pHsw1, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
ggtaggttttgccggtgccgggcgggccga	Protospacer
 . * *****************.* ****.

20. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013265 (Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
ccgtggttttgccggtgccggtggtgccga	Protospacer
. *  ****************  ******.

21. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014580 (Burkholderia sp. OLGA172 plasmid pOLGA1, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
gcaacgttttgccggtgccgggagcgccga	Protospacer
  .*.***************** *.****.

22. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_015579 (Novosphingobium sp. PP1Y plasmid Lpl, complete sequence) position: , mismatch: 7, identity: 0.767

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
tgtgggttttgccggtgccgggtccgccga	Protospacer
*. . ****************** .****.

23. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcggctgcttgctgcgctgcgccgtatcgg	Protospacer
  .****** * *************** ..

24. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcggctgcttgctgcgctgcgccgtatcgg	Protospacer
  .****** * *************** ..

25. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

26. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

27. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcgggcc	Protospacer
 **** ****** ***********.. *

28. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

29. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

30. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048282 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248d, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

31. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

32. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcgggcc	Protospacer
 **** ****** ***********.. *

33. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagatgctggaagcgctgcgccgtttcct	Protospacer
  ** ******* ************ *

34. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

35. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagatgctggaagcgctgcgccgtttcct	Protospacer
  ** ******* ************ *

36. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
tccgcggctggatgcgctgcgccgggcggc	Protospacer
*  ** ****************** ..*.

37. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagatgctggaagcgctgcgccgtttcct	Protospacer
  ** ******* ************ *

38. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagcggctggatgcgcttcgccgtgccac	Protospacer
  *** ************ ******.. *

39. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcagatgctggaagcgctgcgccgtttcct	Protospacer
  ** ******* ************ *

40. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to MT711976 (Streptomyces phage Coruscant, complete genome) position: , mismatch: 8, identity: 0.733

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
tgagctgctggatgctcttcgccaatctta	Protospacer
*************** ** ****.  .  *

41. spacer 2.6|1392039|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018720 (Sterolibacteriaceae bacterium J5B plasmid pSTJ2, complete sequence) position: , mismatch: 8, identity: 0.733

tcctgccgacttctccttgggcattactga	CRISPR spacer
ccctgccgaattctccttggacatcatgcc	Protospacer
.******** **********.***.*.

42. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014310 (Burkholderia sp. PAMC 26561 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cgtgcgatttgccggtgccgggtttgccga	Protospacer
.. ..* **************** *****.

43. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017078 (Novosphingobium resinovorum strain SA1 plasmid pSA3, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cggtagttttgccggtgccggtggtgccca	Protospacer
..*  ****************  ***** .

44. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020740 ([Pseudomonas] mesoacidophila strain ATCC 31433 plasmid pATCC31433, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
tgtggcttttgccggtgccggttttgccga	Protospacer
*. .  *************** * *****.

45. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_023285 (Streptomyces sp. F8 plasmid pFRL5, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
gggtggtcttgccggtgccgggtgggccaa	Protospacer
 .*  **.**************** ***..

46. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to JF974300 (Synechococcus phage S-CBP42, *** SEQUENCING IN PROGRESS ***, 8 unordered pieces) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cggcgggggtgccggtgccgggggtgccgg	Protospacer
..*  *   ************* *******

47. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cggtcgttttgccggtgccggtagtgccca	Protospacer
..* .****************  ***** .

48. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021407 (Celeribacter manganoxidans strain DY25 plasmid pDY25-C, complete sequence) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
gcgtcgttttgccggagccgggcgtgcctt	Protospacer
  * .********** ******.*****

49. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to KC310805 (Synechococcus phage S-CBP42, complete genome) position: , mismatch: 8, identity: 0.733

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cggcgggggtgccggtgccgggggtgccgg	Protospacer
..*  *   ************* *******

50. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
cgatctgctggatgtgctgcgccgcgaatc	Protospacer
.** **********.*********.. .

51. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
cgatctgctggatgcgcggcgccggcgcgt	Protospacer
.** ************* ******    .

52. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcggccc	Protospacer
 **** ****** ***********..

53. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcggccc	Protospacer
 **** ****** ***********..

54. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcggccc	Protospacer
 **** ****** ***********..

55. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ccagctgctggatgcgcttcgcccggtcgg	Protospacer
. **************** ****  .* ..

56. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gcacctgctcgatgcgctgcgccgtcatcg	Protospacer
  * ***** ***************    .

57. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 9, identity: 0.7

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
ggagcggctggaggcgctgcgccgcggccc	Protospacer
 **** ****** ***********..

58. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_007950 (Polaromonas sp. JS666 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.7

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
cgtgacttttaccggtgccgggtttgccga	Protospacer
.. .  ****.************ *****.

59. spacer 2.7|1392105|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022611 (Mycolicibacterium madagascariense strain JCM 13574 plasmid pJCM13574) position: , mismatch: 9, identity: 0.7

tagatgttttgccggtgccgggtgtgccgg	CRISPR spacer
ggtgggtcttgccggtgccgggtgggccca	Protospacer
 . . **.**************** *** .

60. spacer 2.11|1392369|30|NZ_CP031699|CRT matches to JF270478 (Psychrobacter phage Psymv2, complete genome) position: , mismatch: 9, identity: 0.7

caagaaaacaacataccgacaggcatactg	CRISPR spacer
gaagaaaacaacataccgccagttgaaact	Protospacer
 ***************** *** .. * .

61. spacer 2.4|1391907|30|NZ_CP031699|PILER-CR,CRISPRCasFinder,CRT matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 10, identity: 0.667

tgagctgctggatgcgctgcgccgtatgaa	CRISPR spacer
gccgctgctgcatgcgctgcgccgcggagc	Protospacer
   ******* *************.. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

554123 : 628825

Burkholderia_virus(28.21%)

tail,plate,capsid,integrase,terminase,transposase,tRNA

attL 560567:560587|attR 604427:604447

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123794680.1\|554123_555029_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_123794682.1\|555267_557121_+	lipid A export permease/ATP-binding protein MsbA	W8CYL7	Bacillus_phage	6.6e-40	25.5
WP_123794684.1\|557182_558418_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	9.0e-09	32.5
WP_162842948.1\|558466_560494_+	glycosyltransferase	NA	NA	NA	NA
560567:560587	attL	NA	NA	NA	NA
WP_123794687.1\|560639_561653_+	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	7.6e-14	26.8
WP_162842949.1\|561728_561887_+	hypothetical protein	NA	NA	NA	NA
WP_123794689.1\|561930_562173_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_123794691.1\|562169_562556_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_123794693.1\|562625_564686_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_126325853.1\|564970_565462_-	phage virion morphogenesis protein	A0A0A1IUZ3	Pseudomonas_phage	3.6e-17	39.3
WP_123796440.1\|565471_566377_-\|capsid	minor capsid protein	A0A0M4UTA3	Ralstonia_phage	3.3e-61	48.9
WP_126325854.1\|566373_567879_-	DUF935 family protein	Q6QIC0	Burkholderia_phage	2.4e-117	47.7
WP_066079429.1\|568051_569353_-\|terminase	terminase	A0A2P9JZI8	Alteromonadaceae_phage	4.2e-158	65.1
WP_066079426.1\|569349_569895_-	DUF3486 family protein	Q6QIC2	Burkholderia_phage	3.4e-29	42.5
WP_066079422.1\|569896_570214_-	hypothetical protein	A0A2H4JGU5	uncultured_Caudovirales_phage	1.1e-27	64.9
WP_066079419.1\|570206_570533_-	hypothetical protein	A4JWP6	Burkholderia_virus	6.0e-13	44.9
WP_066079416.1\|570532_570742_-	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	4.4e-09	47.7
WP_162842978.1\|570738_570912_-	hypothetical protein	NA	NA	NA	NA
WP_066079412.1\|570931_571330_-	hypothetical protein	NA	NA	NA	NA
WP_115225457.1\|571313_571568_-	hypothetical protein	NA	NA	NA	NA
WP_066081431.1\|571568_571796_-	hypothetical protein	NA	NA	NA	NA
WP_066081436.1\|571810_572323_-	TIGR02594 family protein	A0A0A1IUP1	Pseudomonas_phage	3.9e-59	63.3
WP_066081496.1\|572406_572625_-	hypothetical protein	NA	NA	NA	NA
WP_115225497.1\|572919_573570_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	6.5e-51	45.2
WP_162842979.1\|573576_574032_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_082790477.1\|574218_574440_+	DNA-binding protein	NA	NA	NA	NA
WP_115225461.1\|574454_574706_+	DNA-binding protein	NA	NA	NA	NA
WP_115225462.1\|574715_575003_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_066081292.1\|575047_575905_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.9e-45	40.8
WP_123795579.1\|575906_577691_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	1.0e-146	48.4
WP_066077530.1\|577687_578830_+	AAA family ATPase	A4JWN1	Burkholderia_virus	1.4e-101	50.5
WP_066077528.1\|578829_579039_+	hypothetical protein	NA	NA	NA	NA
WP_123795580.1\|579007_579229_+	hypothetical protein	NA	NA	NA	NA
WP_066077523.1\|579230_579413_+	hypothetical protein	NA	NA	NA	NA
WP_123795581.1\|579416_579917_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	8.6e-27	47.7
WP_123795582.1\|579906_580377_+	hypothetical protein	NA	NA	NA	NA
WP_123795583.1\|580824_581430_+	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	5.1e-58	56.4
WP_123795584.1\|581432_581618_+	hypothetical protein	NA	NA	NA	NA
WP_123795585.1\|581663_581939_+	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	6.4e-16	55.1
WP_123795586.1\|582095_582554_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	6.5e-21	48.9
WP_123795587.1\|582550_582904_+	transcriptional regulator	NA	NA	NA	NA
WP_123795588.1\|583260_584250_+	2-oxoacid:acceptor oxidoreductase	Q6QIB7	Burkholderia_phage	1.4e-49	36.5
WP_123795589.1\|584292_585234_+	hypothetical protein	A4JWK0	Burkholderia_virus	1.5e-40	36.1
WP_123795590.1\|585284_585617_+	DUF2190 family protein	NA	NA	NA	NA
WP_123795591.1\|585622_585907_+	hypothetical protein	NA	NA	NA	NA
WP_123795592.1\|585910_586363_+	DUF1320 domain-containing protein	B7SDP4	Haemophilus_phage	3.3e-09	31.2
WP_123795593.1\|586362_586863_+	hypothetical protein	Q6QIB2	Burkholderia_phage	3.6e-17	31.4
WP_123795594.1\|586874_588266_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	2.3e-101	44.4
WP_123795595.1\|588280_588796_+\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	9.4e-45	51.2
WP_123795596.1\|588962_589247_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_123795597.1\|589236_589395_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_123795598.1\|589369_589660_-	hypothetical protein	NA	NA	NA	NA
WP_123795599.1\|589706_591197_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_123795600.1\|591193_592615_+	hypothetical protein	A4PE52	Ralstonia_virus	2.1e-25	29.3
WP_123795601.1\|592712_593609_+\|tail	phage tail protein	NA	NA	NA	NA
WP_123795692.1\|593605_593827_+\|tail	tail protein X	Q6QIA3	Burkholderia_phage	3.3e-07	33.8
WP_123795602.1\|593854_594979_+	hypothetical protein	A4JWL3	Burkholderia_virus	5.6e-66	44.0
WP_123795693.1\|594953_595541_+\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_123795603.1\|595885_596263_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_123795604.1\|596253_597405_+\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	6.7e-67	44.0
WP_123795605.1\|597408_597987_+\|tail	phage tail protein	A4JWL7	Burkholderia_virus	3.3e-46	50.8
WP_162842980.1\|598003_600361_+\|tail	tail fiber protein	A0A193GYM0	Enterobacter_phage	8.5e-32	47.1
WP_123795606.1\|600379_601126_+	DUF4376 domain-containing protein	A0A0R6PGN1	Moraxella_phage	1.4e-33	53.8
WP_123795607.1\|601183_601654_+	hypothetical protein	A0A0R6PFI9	Moraxella_phage	9.6e-28	48.6
WP_123795608.1\|601844_602027_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_123795695.1\|602919_603657_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	8.4e-79	56.5
WP_123795609.1\|603733_604084_-	hypothetical protein	K4ICP1	Acidithiobacillus_phage	1.4e-20	43.5
WP_151090925.1\|604694_605542_-\|transposase	IS630 family transposase	NA	NA	NA	NA
604427:604447	attR	NA	NA	NA	NA
WP_123794963.1\|605658_606198_-	hypothetical protein	NA	NA	NA	NA
WP_123794964.1\|606505_608398_+	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_123794965.1\|608807_609125_-	porin	NA	NA	NA	NA
WP_126325856.1\|609327_610131_+	carbon-nitrogen hydrolase family protein	M1I6H3	Paramecium_bursaria_Chlorella_virus	9.0e-10	27.3
WP_123794966.1\|610203_610977_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_123794967.1\|611079_611322_-	hypothetical protein	NA	NA	NA	NA
WP_123794968.1\|611460_611895_-	biopolymer transporter ExbD	NA	NA	NA	NA
WP_123794969.1\|611898_612558_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_123795147.1\|612625_613573_-	TonB family protein	NA	NA	NA	NA
WP_123794970.1\|613972_614422_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_123794971.1\|614801_615179_+	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_123794972.1\|615396_616554_+	NnrS family protein	NA	NA	NA	NA
WP_123794973.1\|616860_617742_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA
WP_123794974.1\|618441_619950_-	catalase	A0A2K9L0T1	Tupanvirus	4.2e-101	48.7
WP_123794975.1\|620260_620806_+	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	1.2e-10	28.3
WP_123794976.1\|620865_621633_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_162842961.1\|621629_621779_-	hypothetical protein	NA	NA	NA	NA
WP_123795148.1\|621780_622650_+	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
WP_123794977.1\|623397_624192_+	3'-5' exonuclease	NA	NA	NA	NA
WP_123794978.1\|624812_627500_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_123794979.1\|627811_628825_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA

DBSCAN-SWA_2

1937747 : 1999275

Pseudomonas_phage(29.41%)

tail,plate,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123794766.1\|1937747_1938527_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_123794764.1\|1938758_1939223_+	universal stress protein	NA	NA	NA	NA
WP_123794762.1\|1939482_1939650_-	N-acetyltransferase	NA	NA	NA	NA
WP_123794761.1\|1940101_1941778_-	AIPR family protein	E5G6M2	Salmonella_phage	9.3e-33	27.1
WP_123794757.1\|1944788_1945349_-	pseudouridine synthase	NA	NA	NA	NA
WP_123794755.1\|1945999_1948231_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_123794753.1\|1948465_1948945_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_123794751.1\|1949043_1949721_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_162842952.1\|1949825_1950530_+	thermonuclease family protein	NA	NA	NA	NA
WP_123794747.1\|1950599_1952765_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_123794745.1\|1952761_1953982_+	heme biosynthesis protein HemY	NA	NA	NA	NA
WP_123794743.1\|1954069_1955131_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_123794741.1\|1955235_1955769_+	NUDIX hydrolase	NA	NA	NA	NA
WP_123794739.1\|1956377_1957163_+	hypothetical protein	A0A0U1T6E4	Pseudomonas_phage	1.8e-31	43.6
WP_164715652.1\|1957198_1962877_+	hypothetical protein	A0A0U1T6E4	Pseudomonas_phage	4.5e-39	45.0
WP_123796389.1\|1963032_1963671_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_123796388.1\|1963705_1964332_-	Smr/MutS family protein	NA	NA	NA	NA
WP_123796387.1\|1964353_1964857_-	DUF1841 family protein	NA	NA	NA	NA
WP_123796386.1\|1965073_1965676_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_123796385.1\|1966005_1967139_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_123796390.1\|1967341_1967959_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_123796384.1\|1968161_1970015_+	hypothetical protein	NA	NA	NA	NA
WP_123796383.1\|1970303_1970885_+	outer membrane lipoprotein LolB	NA	NA	NA	NA
WP_123796382.1\|1970895_1971744_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_162843015.1\|1972144_1973173_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	8.5e-45	34.7
WP_123796380.1\|1973253_1973826_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_123796379.1\|1974117_1974600_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_123796378.1\|1974751_1975888_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_123796377.1\|1976575_1978051_-	anthranilate synthase component I	NA	NA	NA	NA
WP_123796376.1\|1978080_1978494_-	hypothetical protein	NA	NA	NA	NA
WP_123796375.1\|1978626_1979451_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_123796374.1\|1979520_1980168_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_123796373.1\|1980203_1981445_-	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	5.4e-78	50.2
WP_123796372.1\|1981850_1982303_+	hypothetical protein	NA	NA	NA	NA
WP_123796371.1\|1982355_1982946_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_123796370.1\|1982955_1983153_+	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_123796442.1\|1983366_1983693_+	hypothetical protein	NA	NA	NA	NA
WP_162843018.1\|1983717_1984485_-	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	5.7e-78	57.0
WP_123796416.1\|1984535_1984643_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_123796417.1\|1984778_1985990_-	hypothetical protein	NA	NA	NA	NA
WP_123796418.1\|1985990_1986452_-	hypothetical protein	F6MIM0	Haemophilus_phage	8.8e-34	49.1
WP_123796419.1\|1986452_1987064_-\|tail	phage tail protein	NA	NA	NA	NA
WP_123796420.1\|1987081_1989589_-	right-handed parallel beta-helix repeat-containing protein	W8JPQ4	Salmonella_phage	4.2e-13	56.7
WP_126325836.1\|1989589_1990168_-\|tail	phage tail protein	Q6QI98	Burkholderia_phage	3.3e-46	48.7
WP_123796425.1\|1990160_1991327_-\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	1.5e-61	42.0
WP_123796424.1\|1991317_1991695_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_123796423.1\|1991773_1992352_-\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	2.1e-24	40.7
WP_123796422.1\|1992335_1993436_-	hypothetical protein	A4JWL3	Burkholderia_virus	5.4e-74	44.6
WP_123796421.1\|1993446_1993665_-\|tail	tail protein X	Q6QIA3	Burkholderia_phage	6.0e-09	38.2
WP_126325837.1\|1993661_1994558_-\|tail	phage tail protein	NA	NA	NA	NA
WP_126325843.1\|1994557_1996225_-\|tail	phage tail tape measure protein	A7YGZ1	Campylobacter_phage	2.0e-35	35.4
WP_126325839.1\|1996454_1997927_+	DUF935 family protein	A4JWJ5	Burkholderia_virus	4.5e-108	45.0
WP_123796437.1\|1997926_1998832_+\|capsid	minor capsid protein	H6V8N8	Pseudomonas_phage	6.9e-59	46.5
WP_123796436.1\|1998834_1999275_+	phage virion morphogenesis protein	X4YTG5	Pseudomonas_phage	1.0e-23	45.1

DBSCAN-SWA_3

2084555 : 2157581

Pseudomonas_phage(20.0%)

holin,tail,plate,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_123796014.1\|2084555_2084975_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_123796013.1\|2084952_2085201_+	hypothetical protein	NA	NA	NA	NA
WP_123796012.1\|2085430_2086549_+	porin	NA	NA	NA	NA
WP_123796011.1\|2086685_2088062_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_123796010.1\|2088373_2088664_-	hypothetical protein	NA	NA	NA	NA
WP_123796009.1\|2089157_2089637_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_123796008.1\|2089876_2094235_+	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA
WP_123796007.1\|2094349_2096347_+	glycogen debranching protein GlgX	NA	NA	NA	NA
WP_123796006.1\|2096557_2099038_+	glycogen/starch/alpha-glucan phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.9e-18	49.4
WP_123796005.1\|2099976_2100453_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_123796004.1\|2100722_2101409_+	pseudouridine synthase	NA	NA	NA	NA
WP_123796003.1\|2101666_2103043_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_123796002.1\|2103166_2103538_-	rod shape-determining protein RodA	NA	NA	NA	NA
WP_123796001.1\|2103753_2105061_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_123796000.1\|2105053_2105491_+	hypothetical protein	NA	NA	NA	NA
WP_123795999.1\|2105898_2107083_-	sugar transporter	NA	NA	NA	NA
WP_123795998.1\|2107518_2107743_-	hypothetical protein	NA	NA	NA	NA
WP_162842998.1\|2107753_2107927_-	hypothetical protein	NA	NA	NA	NA
WP_123795997.1\|2107928_2108645_-	hypothetical protein	NA	NA	NA	NA
WP_123795996.1\|2108653_2109100_-	hypothetical protein	NA	NA	NA	NA
WP_162842995.1\|2109156_2109318_-	hypothetical protein	NA	NA	NA	NA
WP_162842994.1\|2109319_2109481_-	hypothetical protein	A0A0M3LQ94	Mannheimia_phage	9.2e-07	59.0
WP_162842997.1\|2109558_2109708_-	hypothetical protein	NA	NA	NA	NA
WP_123795995.1\|2109959_2110235_+	BrnT family toxin	NA	NA	NA	NA
WP_123795994.1\|2110212_2110497_+	BrnA antitoxin family protein	A0A2H4J5Y5	uncultured_Caudovirales_phage	7.3e-07	56.8
WP_123795993.1\|2110783_2111572_+	KilA-N domain-containing protein	A0A2H4IZE1	uncultured_Caudovirales_phage	3.5e-22	44.6
WP_126325841.1\|2111622_2120289_-	hypothetical protein	A0A0U1T6E4	Pseudomonas_phage	6.9e-39	45.0
WP_123796326.1\|2120359_2121241_-	hypothetical protein	NA	NA	NA	NA
WP_123796325.1\|2121267_2121915_-	hypothetical protein	NA	NA	NA	NA
WP_123796324.1\|2121914_2122139_-	hypothetical protein	NA	NA	NA	NA
WP_162843012.1\|2122356_2122506_-	hypothetical protein	NA	NA	NA	NA
WP_123796323.1\|2122594_2123176_-	hypothetical protein	NA	NA	NA	NA
WP_162843011.1\|2123192_2123366_-	hypothetical protein	NA	NA	NA	NA
WP_123796322.1\|2123448_2124432_-	hypothetical protein	NA	NA	NA	NA
WP_123796321.1\|2124443_2125430_-	hypothetical protein	NA	NA	NA	NA
WP_126325840.1\|2125581_2125857_-	hypothetical protein	NA	NA	NA	NA
WP_162843010.1\|2126069_2126246_-	hypothetical protein	NA	NA	NA	NA
WP_123796319.1\|2126344_2126572_+	hypothetical protein	NA	NA	NA	NA
WP_123796318.1\|2126564_2127014_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_123796317.1\|2127099_2127285_-	hypothetical protein	NA	NA	NA	NA
WP_123796316.1\|2127298_2127736_-	hypothetical protein	NA	NA	NA	NA
WP_123796314.1\|2128506_2130060_-	hypothetical protein	NA	NA	NA	NA
WP_123796313.1\|2130104_2132138_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_123796312.1\|2132353_2133703_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.3e-50	31.4
WP_123796311.1\|2134128_2135070_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_123796310.1\|2135209_2136058_+	presqualene diphosphate synthase HpnD	NA	NA	NA	NA
WP_123796309.1\|2136134_2137457_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_123796308.1\|2137557_2138277_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_123796307.1\|2138368_2139556_+	acetylornithine/succinyldiaminopimelate transaminase	A0A1V0SKB7	Klosneuvirus	6.4e-28	28.2
WP_123796306.1\|2139646_2140483_+	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_123796305.1\|2140601_2141984_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.0e-48	30.3
WP_123796304.1\|2142070_2143375_+	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_123796436.1\|2143759_2144200_-	phage virion morphogenesis protein	X4YTG5	Pseudomonas_phage	1.0e-23	45.1
WP_123796437.1\|2144202_2145108_-\|capsid	minor capsid protein	H6V8N8	Pseudomonas_phage	6.9e-59	46.5
WP_126325839.1\|2145107_2146580_-	DUF935 family protein	A4JWJ5	Burkholderia_virus	4.5e-108	45.0
WP_126325843.1\|2146809_2148477_+\|tail	phage tail tape measure protein	A7YGZ1	Campylobacter_phage	2.0e-35	35.4
WP_126325837.1\|2148476_2149373_+\|tail	phage tail protein	NA	NA	NA	NA
WP_123796421.1\|2149369_2149588_+\|tail	tail protein X	Q6QIA3	Burkholderia_phage	6.0e-09	38.2
WP_123796422.1\|2149598_2150699_+	hypothetical protein	A4JWL3	Burkholderia_virus	5.4e-74	44.6
WP_123796423.1\|2150682_2151261_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	2.1e-24	40.7
WP_123796424.1\|2151339_2151717_+	GPW/gp25 family protein	NA	NA	NA	NA
WP_123796425.1\|2151707_2152874_+\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	1.5e-61	42.0
WP_126325844.1\|2152866_2153445_+\|tail	phage tail protein	Q6QI98	Burkholderia_phage	5.6e-46	48.7
WP_123796430.1\|2153445_2155458_+	hypothetical protein	R9TNJ7	Vibrio_phage	1.2e-07	58.1
WP_123796431.1\|2155466_2156063_+\|tail	phage tail protein	NA	NA	NA	NA
WP_123796432.1\|2156062_2156521_+	hypothetical protein	F6MIM0	Haemophilus_phage	9.6e-33	48.1
WP_123796416.1\|2156655_2156763_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_162843018.1\|2156813_2157581_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	5.7e-78	57.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP031699

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection