CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP043320	Pseudomonas sp. C27(2019) chromosome, complete genome	3 crisprs	DEDDh,WYL,cas3,DinG,csa3,cas14j,RT	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043320_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043320_1

656962-657066

Orphan

Consensus_repeat	Method
CGTTGGCGTGTGTTTGGTTGATTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043320_1

>merge|NZ_CP043320|1|656962-657066|CRISPRCasFinder
CGTTGGCGTGTGTTTGGTTGATTTTGTCGCCTATGAATGGGTGACCTACAGTGGTGCAAGGTCGGCACTTTAGGGCAGGCGTTGGCAGTGTGTTTGGTTGATTTT

>NZ_CP043320|1|1|656962-657066|CRISPRCasFinder
CGTTGGCGTGTGTTTGGTTGATTTT	GTCGCCTATGAATGGGTGACCTACAGTGGTGCAAGGTCGGCACTTTAGGGCAGGC
GTTGGCAGTGTGTTTGGTTGATTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043320.1\|WP_151183903.1\|667244_668135_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226605
NZ_CP043320.1\|WP_151183901.1\|664617_666447_-\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|223547
NZ_CP043320.1\|WP_151183900.1\|663447_664014_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|234753
NZ_CP043320.1\|WP_151183887.1\|648547_649081_+\|CinA-family-protein	unknown	unknown	gnl\|CDD\|334938
NZ_CP043320.1\|WP_151183893.1\|655099_656098_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP043320.1\|WP_151183886.1\|647621_648416_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP043320.1\|WP_151183892.1\|654800_655004_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|166895
NZ_CP043320.1\|WP_151183898.1\|661932_662226_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377477
NZ_CP043320.1\|WP_151183895.1\|657574_658135_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|182763
NZ_CP043320.1\|WP_151183899.1\|662894_663107_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP043320.1\|WP_151183894.1\|656137_656785_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226176
NZ_CP043320.1\|WP_151183891.1\|654369_654804_+\|HIT-domain-containing-protein	unknown	unknown	gnl\|CDD\|334445
NZ_CP043320.1\|WP_151183889.1\|650899_652615_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP043320.1\|WP_151183897.1\|660009_660657_-\|response-regulator	unknown	unknown	gnl\|CDD\|236538
NZ_CP043320.1\|WP_151183890.1\|652800_654129_-\|OprD-family-porin	unknown	unknown	gnl\|CDD\|335381
NZ_CP043320.1\|WP_151183902.1\|666448_667243_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224026
NZ_CP043320.1\|WP_151185985.1\|660823_661936_+\|ribonuclease-D	unknown	unknown	gnl\|CDD\|130455
NZ_CP043320.1\|WP_151183896.1\|658173_660000_-\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP043320.1\|WP_151185984.1\|649151_650189_+\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP043320.1\|WP_151183888.1\|650239_650728_+\|recombination-regulator-RecX	unknown	unknown	gnl\|CDD\|234646

Protein	Function_ID	Function_description	E-value
NZ_CP043320.1\|WP_151183903.1\|667244_668135_-\|ABC-transporter-permease	gnl\|CDD\|226605	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only].	7.51775e-116
NZ_CP043320.1\|WP_151183901.1\|664617_666447_-\|SLC13-family-permease	gnl\|CDD\|223547	COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism].	9.13273e-51
NZ_CP043320.1\|WP_151183900.1\|663447_664014_+\|dCTP-deaminase	gnl\|CDD\|234753	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed.	5.02631e-110
NZ_CP043320.1\|WP_151183887.1\|648547_649081_+\|CinA-family-protein	gnl\|CDD\|334938	pfam02464, CinA, Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. Some members of this family have nicotinamide mononucleotide (NMN) deamidase activity.	1.01033e-64
NZ_CP043320.1\|WP_151183893.1\|655099_656098_-\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	3.81187e-163
NZ_CP043320.1\|WP_151183886.1\|647621_648416_+\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	4.1468e-125
NZ_CP043320.1\|WP_151183892.1\|654800_655004_+\|hypothetical-protein	gnl\|CDD\|166895	PRK00295, PRK00295, hypothetical protein; Provisional.	1.67861e-19
NZ_CP043320.1\|WP_151183898.1\|661932_662226_+\|hypothetical-protein	gnl\|CDD\|377477	pfam05166, YcgL, YcgL domain. This family of proteins formerly called DUF709 includes the E. coli gene ycgL. homologs of YcgL are found in gammaproteobacteria. The structure of this protein shows a novel alpha/beta/alpha sandwich structure.	1.17967e-33
NZ_CP043320.1\|WP_151183895.1\|657574_658135_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|182763	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.	2.65975e-62
NZ_CP043320.1\|WP_151183899.1\|662894_663107_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.33533e-29
NZ_CP043320.1\|WP_151183894.1\|656137_656785_-\|hypothetical-protein	gnl\|CDD\|226176	COG3650, COG3650, Predicted membrane protein [Function unknown].	1.21407e-25
NZ_CP043320.1\|WP_151183891.1\|654369_654804_+\|HIT-domain-containing-protein	gnl\|CDD\|334445	pfam01230, HIT, HIT domain.	1.16943e-18
NZ_CP043320.1\|WP_151183889.1\|650899_652615_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP043320.1\|WP_151183897.1\|660009_660657_-\|response-regulator	gnl\|CDD\|236538	PRK09483, PRK09483, response regulator; Provisional.	7.06272e-91
NZ_CP043320.1\|WP_151183890.1\|652800_654129_-\|OprD-family-porin	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	4.7569e-159
NZ_CP043320.1\|WP_151183902.1\|666448_667243_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224026	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	5.00369e-143
NZ_CP043320.1\|WP_151185985.1\|660823_661936_+\|ribonuclease-D	gnl\|CDD\|130455	TIGR01388, Ribonuclease_D, ribonuclease D. This model describes ribonuclease D, a 3'-exonuclease shown to act on tRNA both in vitro and when overexpressed in vivo. Trusted members of this family are restricted to the Proteobacteria; Aquifex, Mycobacterial, and eukaryotic homologs are not full-length homologs. Ribonuclease D is not essential in E. coli and is deleterious when overexpressed. Its precise biological role is still unknown. [Transcription, RNA processing].	7.45691e-136
NZ_CP043320.1\|WP_151183896.1\|658173_660000_-\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP043320.1\|WP_151185984.1\|649151_650189_+\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP043320.1\|WP_151183888.1\|650239_650728_+\|recombination-regulator-RecX	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	6.60135e-41

>NZ_CP043320.1|WP_151183894.1|656137_656785_-|hypothetical-protein
MRHLRIISLVLLALALSACQSFTASSAITQPALRLQGNLTHNGENWLLQPCTVQENYTLELPTALDDEFKSLLAESPNGLFADLSGQLDNEQKHFSVSQRYRVQIEGYNCNDPDFERLLLRASGNEPFWSILQTPRGLIFNQIDQPTIALPYIEEQLPDGRFHISTQANNQNLQLWITPQRCTDSMSGSIYHLNTQLQWNQQTLQGCAAFGALRD
>NZ_CP043320.1|WP_151183893.1|655099_656098_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MLRIAINGYGRIGRNILRTLFERGLHDKLQIVAINDLGDAKTLAHLTRFDSTFGRFAHSVQLDGESLQIGNQSIRLLSQADPALLPWQELGVDVVLECTGRMKQRQQAQQHITTGARRVLLAHPMDDADITVVYGVNHQLLDNQHIISNASCTTNCLAPLAKVLHEGVGIQHGMMTTVHAYTNDQNLLDKSHKDLYRARAAASSIIPTSTGAAKAIGLVIPELAGRLDGMAVRVPTQNVSLVDLSFIAERDTSREEINDILSAGATLLPQGVMECNEQPLVSCDFNGYPVSCVADLTQTRVQDNFVKVLAWYDNEWAFANRMLDVLTSWRGV
>NZ_CP043320.1|WP_151183892.1|654800_655004_+|hypothetical-protein
MNVDARIAELEMRQAFQDDTIQALNDVIVEQQRLLARMQTQLELLAQRQNDMHSQFDETPNEPPPHY
>NZ_CP043320.1|WP_151183891.1|654369_654804_+|HIT-domain-containing-protein
MFDLDERLKNDTVVIADSVLCRILLMNDSRYPWLILVPRIASVSEVFELTAVQQQQLWQEASDVGRVLKSEFQADKMNIATLGNVVKQLHMHVVVRMQEDAAWPAPVWGNGAAQPYSENAKSQMCTRMRAAIAQIDLIKTEVDL
>NZ_CP043320.1|WP_151183890.1|652800_654129_-|OprD-family-porin
MQMIKLSVIALAVAAASTQMAVASQQSESNGFIEDSKLDTHARVLYMNRDFRNDSGTTTRNSYNEDTGLGLKAIYESGFTQGTVGFGVDAFGLQGIKLDSGRGRNGNGQFPTHSNGKAQDNYSQAGGAVKARISNTVLKYGNQFVSLPVLATDDSRLLPETTTGFLVTSNEIENLELNLGHFTALSAQSQTGHDSVSDDDYGTLRSLDLVGGRYNFTDDLSVAYYYSDADLGHKGDGNRLEIKKHYTNVNYTLPIADAQSLNFDFNMYNSKFNDKDAPRGDRSSTNNVWSLAAAYTLDAHTFTVAHQRVTGGQDAGYVYGYDGGGAVFLANSVQYQDFDQKGEKSYQVRYDLDMATFGVPGLSFMTRYVRGSNIEDQSVADTGRNNGKNWERDIEAKYVLQSGAAKDLAFRVRQATYRSNDAAGTVDNNEVRLIVEYPLSIL
>NZ_CP043320.1|WP_151183889.1|650899_652615_-|proline--tRNA-ligase
MRTSQYLLSTLKETPADAVVISHQLMLRAGMIRRLASGLYTWLPLGLRVLRKAEAVVREEMNAAGALEVLMPAVQPAELWQESGRWEEYGPELLRLKDRHQREFCVGPTHEEVITDLARNELSSYRQLPINFYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHTDQASLQETYDRMHQAYTNIFTRLGLNFRPVEADTGSIGGTGSHEFHVLAASGEDDIAFSTASNYAANIEKAEALPRETNRGEATQELRLVDTPNTKTIEQLTEQFSIAVEKTIKTLIVRGVEENTLVALIVRGDHTLNEIKAANHPLVASPLEFAGDAEIFDACGAYPGSLGPKDLAIACIIDRSVALMSDFAAGANQEDKHWFGLNWERDLELPEIADLRNVQAGDPSPDGQGTLEIKRGIEVGHIFQLGTKYSESMNCTVMGEDGKPATLTMGCYGIGVSRVVAAAIEQNYDDNGIIWPAALAPFDVAIVPMKYDKPEVKEATDKLYEQLTAAGFDVLLDDRDKKTSPGVKFADMELIGIPQRVVISERSLKEGTLEYKGRRDTESQHIAIEQALDVISKQLRA
>NZ_CP043320.1|WP_151183888.1|650239_650728_+|recombination-regulator-RecX
MPFFCEAEMLDTPVSIRRAAMNLLARREHGYVELSRKLRQRGAEAEMIDVELQRLMDDGLLSEQRYVESYIRSRANTGRGPMRIREELTQRGLARELVECALAGADIDWQAQMQDLWQRRFSGQVTDLKDKAKQSRFLAQRGYAAEEIRYLLDGQRFQGVDD
>NZ_CP043320.1|WP_151185984.1|649151_650189_+|recombinase-RecA
MDENKKKALAAALGQIERQFGKGAVMRMGDHERVAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKVGATCAFIDAEHALDPEYAGKLGVNIDDLYVSQPDTGEQALEIADMLVRSNAMDVIVIDSVAALVPKAEIEGDMGDTHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAVKEGDEITGNETRVKVVKNKVAAPFRQAEFQILYGKGIYRNGEIIDLGVQQGLIEKSGAWYSHKGVRMGQGKANSARYLEENPEICQAIEQQIRDQLLAPAPSNNKQQAVVEDTVE
>NZ_CP043320.1|WP_151183887.1|648547_649081_+|CinA-family-protein
MFTITQLAEQLGQQLLKQNAFVSTAESCTGGGIAEAITRVAGSSAWFEVGFVTYSNRQKMRVLQVAEADLQRDGAVSQSVVEGMARGAQQLSGAQYTVAVSGVAGPGGGSVEKPVGTVCLAWAHGMQVQSACWHFAGDRQSVRQQSVQAALAGLLCVMEGRAANDWQQCLKKHLPNQ
>NZ_CP043320.1|WP_151183886.1|647621_648416_+|glutamate-racemase
MDKHAAIGVFDSGLGGISVLHAIRNLLPAESLIYIADSAHVPYGEKSPEFIVQRSLAISEFLLAQRVKAIVVACNTATAAAVSELRQRWPDVLIVGMEPAVKPAVQASQSGKVGVLATTGTLRSARFAALLERFASDVEVITQPCPGLVELIEAGELQTDTTRALLSSYVEPLLQAGCDTLILGCTHYPLLKPLLQRMVPEYVQLIDTGEAVARRLQSELGKHNLLAEAQQPLDHFYGSGDTCATERTLAMLWPEAQPVIALGF
>NZ_CP043320.1|WP_151183895.1|657574_658135_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNIPNIITVMRVALIPVFIVLFWLPFSWSYWAASAVFAFASLTDWLDGYLARRLNQSTPFGAFLDPVADKLIVAVALVLLVAEHNNIWLTLPAIIIICREIMVSALREWMAEIGERAQVAVSSIGKWKTAAQMVALIILLANPPAFNGWVIGGYILLTLSAVLTLWSMVQYLLAAKPHLHTNQTDD
>NZ_CP043320.1|WP_151183896.1|658173_660000_-|excinuclease-ABC-subunit-UvrC
MTTPLFDASAFLRSCTQHPGVYRMFSAEQQLLYIGKAKNLKNRLSSYFKSTINAPKTAALVAKIASIELTVTANETEALLLEQTLIKQWRPPYNILLRDDKSYPYVLLSDNSFPRLGMHRGSKKHNGRYFGPYPSAGAIKESLSVLQKAFKVRQCEDSFYNNRSRPCLQYQIKRCKAPCVGLVEHDEYAEDVRHSVMFLEGRSNALTDELTQSMEQAAQALDFEKAASIRDQIALLRRVQDQQSMEGGHGNVDIIAANVSPGGASVHVISVRDGRVLGSNNFFPQVAIEEDSADVLAAFTAQYYLSHKDRDFPDELIVTSEHSDWPAIAAAIAQQCGKNINIRYRVRGTRARWQQLAMTNAEQALLARLANRTQMTARFTALAKALDLAEAPEHLECFDISHSSGEATVASCVVFGPEGPRKSDYRTYNIEGVTAGDDYAAMRQVLHRRLSSALENNGKLPDVLLVDGGKGQLNMAREVFAELNISQILLLGVAKGVTRKAGFETLYINDTATELNLPEHSPALHLIQQIRDEAHRFAITGHRARRGKTRRTSVLEGIAGVGPKRRRELLKYFGGLQELSRASVEEIAKTPGISKTLAESIYSALHNA
>NZ_CP043320.1|WP_151183897.1|660009_660657_-|response-regulator
MIKLLLVDDHDLVRTAIARMLGDISDLHVVGQASSGEQAYNMVGELSPHVVVMDIRMPGIGGLEATRKIKQRFPEVNILALSACEDEPFPTRLLQAGASGYLTKGACIDETVQAIRQIAAGKHYLSPSIAQQMALKSFDINQQSCPFEQLSKREMQISLMIASGQKTQLISDLLCVSPKTVNTYRYRIFEKLNIENDVELALLAVRHNLVENSTI
>NZ_CP043320.1|WP_151185985.1|660823_661936_+|ribonuclease-D
MNWISNDAELAERCKYWNTLAFIALDTEFIRVDTFYPIAGLLQVSDGEGTYLLDPLLISNWQPLAQVLRNQKVVKVLHACGEDLEVFSRLIGVLPKPMFDTQVAAGYLNIGFSMGYSRLVQHVLNIELPKGETRSDWLQRPLSELQVLYAAQDTEYLVDVYRALEEQLTEQKYAWVLEDGAFLVADYTEETDPFDLWRGIKQAWKLAPQQLAALRELAAWREQQARLRDVPRNRIVRESTLWALAHEQPADMTHLAELEDMHPRILRKEGATLLGIIKKVKALPESAWPAALPEPLPIEASKVLKRLRKVGFEMGHELDIAPELMLRKKKLEALLRTGYPSGPYSLPESLRGWRRELMGDALLACLEDVQ
>NZ_CP043320.1|WP_151183898.1|661932_662226_+|hypothetical-protein
MKRICSVYHSSKKAGMYLYVLRADALKRVPAPLLELFGTPKRAFDLVLTPERRLVREDISQVLSNLDSQGYHLQLPPPEDEYIVHWPEELLRRNDPV
>NZ_CP043320.1|WP_151183899.1|662894_663107_-|cold-shock-protein
MSNRQTGVVKWFNDEKGFGFITPQSGDDLFVHFRAIQSDGFKSLKEGQTVSFVAARGQKGMQAEEVQVVS
>NZ_CP043320.1|WP_151183900.1|663447_664014_+|dCTP-deaminase
MSIKPDKWIRRMAQEHGMIEPFVERQVRTEGEERLISYGVSSYGYDVRCADEFKVFTNLHSVTVDPKNFDEKSFVDVKGPVCIIPPNSFALARTVEFFRIPRNVLTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTTLPAKIYANEGVAQMLFFESDEECEVSYKDRDGKYQGQRGVTLPRA
>NZ_CP043320.1|WP_151183901.1|664617_666447_-|SLC13-family-permease
MNLQLGWVLLLLLFAVALFVRNKPRMDVVALLMIVALPLTGVLSVQETLAGFSDPSVVVIAALFVIGEGLVRTGIAYQLGERLMHRAGSSETRLIVLLMLTVAGLGSVMSSTGVVAIFIPVVLSIAARLKISPSRLMMPLSFAGLISGMLTLVATPPNMIVHSELVRAGYAGFSFFTFAPIGLTVLVLGIFYMLATRRWLASADSKKTAGEARHNIADLVREYRLAGRERRLRVRPNSTLVGQTLNELQLRQQYGINVIAVERQRRFRISLLGATGSTELLSGDVLLVDLVSPTIDLLNSYYELGVEPVTMQSSYFSDHQRELGMAEVMLPPDSRLAGKTIQELGFRSHRKLNVMGLRRNQQALDGLLVDEKLKAGDTLLVAGNWKHIRNLQGHSRDFLVLSLPAEVDDVAPALSQAPHALFSLAVMIILMVTGIVPNVLAVLIGCLLMGAFRCIDMDSAYRSIHWQSIVLIVGMLPFALALQKTGGIDLAVNGLLGLFGNAGPRMILAILFVATAVIGLFISNTATAVLMAPVAIASAQAMQASAAPFAMIVALAASAAFMTPISSPVNTLILGPGQYCFSDFVRIGVPFTVLVMLTSVILVPILFPL
>NZ_CP043320.1|WP_151183902.1|666448_667243_-|ABC-transporter-ATP-binding-protein
MLKANDLHITFNPDTPIETRALCGMSLQIPSGQFVTVIGTNGAGKSTFLNAISGDLSVDSGSILIDDNDVTELPVWERAKQVARVFQDPMAGTCEDLTIEENMSLAEQRGQRRGLSRAIKVSLREEFREHLATLGLGLENRLHDRIGLLSGGQRQAVSLLMAALRPSQILLLDEHTAALDPRTADFVLQLTQRIVKEKQLTTMMVTHSMRQALDVGDRTIMLHQGQVVLDVSGDKRKGLDVPDLLAMFEQVRGEKLADDALLLS
>NZ_CP043320.1|WP_151183903.1|667244_668135_-|ABC-transporter-permease
MSLFSMFGALEIGLIFSLVALGVFISFRLLRFPDLTVDGSFPLGGAVGALCISNGMDPFLATALAALAGAGAGIITAILNVHLKIMDLLASILMMIALYSINLRIMGKPNIPLIMEPTLFTILEPSWLVDYIARPAILVLIVLFAKLALDAYFSTRQGLAIRATGSNPRMARAQGVNTGAMIILGMAISNGLVGLAGALFAQSQGGADISMGIGTIVIGLAAVIVGESILPSRKLFLVTLAVILGAIVYRFFIALALNSDFIGLEAQDLNLVTALLVTFALVIPLIKQRFSRRKRV

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Crispr_ID: NZ_CP043320_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043320_2

1370577-1370667

Orphan

Consensus_repeat	Method
GGGCATGGCAAACTGTAATCGTGGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043320_2

>merge|NZ_CP043320|2|1370577-1370667|CRISPRCasFinder
GGGCATGGCAAACTGTAATCGTGGGCATGAATGCCCACCCTACCGTCTGCATGGGAATATTGTGCGGGCATGGCAAACTGTAATCGTGGGC

>NZ_CP043320|2|2|1370577-1370667|CRISPRCasFinder
GGGCATGGCAAACTGTAATCGTGGGC	ATGAATGCCCACCCTACCGTCTGCATGGGAATATTGTGC
GGGCATGGCAAACTGTAATCGTGGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043320.1\|WP_151184461.1\|1368677_1369529_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP043320.1\|WP_151184459.1\|1366900_1367539_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239314
NZ_CP043320.1\|WP_151184470.1\|1376419_1376896_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP043320.1\|WP_151184458.1\|1366243_1366828_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369095
NZ_CP043320.1\|WP_151184454.1\|1361041_1362370_+\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225233
NZ_CP043320.1\|WP_151184456.1\|1363457_1364273_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274737
NZ_CP043320.1\|WP_151184453.1\|1359587_1361009_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP043320.1\|WP_151184457.1\|1364631_1366191_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP043320.1\|WP_151184464.1\|1371698_1372430_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213226
NZ_CP043320.1\|WP_151184463.1\|1370734_1371505_-\|STAS/SEC14-domain-containing-protein	unknown	unknown	gnl\|CDD\|378774
NZ_CP043320.1\|WP_151184472.1\|1377172_1377640_+\|molybdopterin-synthase-catalytic-subunit-MoaE	unknown	unknown	gnl\|CDD\|182642
NZ_CP043320.1\|WP_151184462.1\|1369532_1370501_+\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NZ_CP043320.1\|WP_151184468.1\|1375219_1375756_-\|molybdenum-cofactor-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|131715
NZ_CP043320.1\|WP_151184471.1\|1376918_1377167_+\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|182985
NZ_CP043320.1\|WP_151184467.1\|1374018_1375218_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP043320.1\|WP_151184466.1\|1373127_1373883_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270255
NZ_CP043320.1\|WP_151184469.1\|1375823_1376426_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP043320.1\|WP_151184455.1\|1362448_1363456_+\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP043320.1\|WP_151184465.1\|1372434_1373112_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NZ_CP043320.1\|WP_151184460.1\|1367848_1368667_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194

Protein	Function_ID	Function_description	E-value
NZ_CP043320.1\|WP_151184461.1\|1368677_1369529_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	1.20979e-148
NZ_CP043320.1\|WP_151184459.1\|1366900_1367539_-\|peroxiredoxin	gnl\|CDD\|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	1.8986e-128
NZ_CP043320.1\|WP_151184470.1\|1376419_1376896_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	1.03892e-95
NZ_CP043320.1\|WP_151184458.1\|1366243_1366828_-\|alpha/beta-hydrolase	gnl\|CDD\|369095	pfam06821, Ser_hydrolase, Serine hydrolase. Members of this family have serine hydrolase activity. They contain a conserved serine hydrolase motif, GXSXG/A, where the serine is a putative nucleophile. This family has an alpha-beta hydrolase fold. Eukaryotic members of this family have a conserved LXCXE motif, which binds to retinoblastomas. This motif is absent from prokaryotic members of this family.	3.02679e-68
NZ_CP043320.1\|WP_151184454.1\|1361041_1362370_+\|C4-dicarboxylate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|225233	COG2358, Imp, TRAP-type uncharacterized transport system, periplasmic component [General function prediction only].	7.74926e-29
NZ_CP043320.1\|WP_151184456.1\|1363457_1364273_+\|hypothetical-protein	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	3.46325e-73
NZ_CP043320.1\|WP_151184453.1\|1359587_1361009_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.78946e-176
NZ_CP043320.1\|WP_151184457.1\|1364631_1366191_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.01837e-43
NZ_CP043320.1\|WP_151184464.1\|1371698_1372430_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213226	cd03259, ABC_Carb_Solutes_like, ATP-binding cassette domain of the carbohydrate and solute transporters-like. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	8.65286e-74
NZ_CP043320.1\|WP_151184463.1\|1370734_1371505_-\|STAS/SEC14-domain-containing-protein	gnl\|CDD\|378774	pfam11964, SpoIIAA-like, SpoIIAA-like. These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in STAT (pfam01740). They adopt open and closed conformations arising from different arrangements of their alpha-2 and alpha-3 helices. They may be membrane associated and may function as carriers of non-polar compounds.	1.03209e-18
NZ_CP043320.1\|WP_151184472.1\|1377172_1377640_+\|molybdopterin-synthase-catalytic-subunit-MoaE	gnl\|CDD\|182642	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE.	2.12028e-61
NZ_CP043320.1\|WP_151184462.1\|1369532_1370501_+\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.34219e-163
NZ_CP043320.1\|WP_151184468.1\|1375219_1375756_-\|molybdenum-cofactor-biosynthesis-protein-B	gnl\|CDD\|131715	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B., molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	4.37123e-98
NZ_CP043320.1\|WP_151184471.1\|1376918_1377167_+\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|182985	PRK11130, moaD, molybdopterin synthase small subunit; Provisional.	2.12737e-19
NZ_CP043320.1\|WP_151184467.1\|1374018_1375218_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	1.59218e-156
NZ_CP043320.1\|WP_151184466.1\|1373127_1373883_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270255	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.19923e-77
NZ_CP043320.1\|WP_151184469.1\|1375823_1376426_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	1.84418e-67
NZ_CP043320.1\|WP_151184455.1\|1362448_1363456_+\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	2.27173e-162
NZ_CP043320.1\|WP_151184465.1\|1372434_1373112_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	3.32162e-88
NZ_CP043320.1\|WP_151184460.1\|1367848_1368667_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.01298e-139

>NZ_CP043320.1|WP_151184462.1|1369532_1370501_+|sulfate-ABC-transporter-ATP-binding-protein
MSIEVRQVHKQFGNFTALNNINLDIQAGELVALLGPSGCGKTTLLRIIAGLETPDTGSILFNGDDVSRRDVRKRNVGFVFQHYALFRHMTVFDNVAFGLRMKSRRERPSEAVIAEKVQELLRMVQLDWLSDRYPEQLSGGQRQRIALARALAVEPQILLLDEPFGALDAKVRKELRRWLANLHEDINLTSVFVTHDQEEAMEVADRIVVMNKGVIEQIGTPAQVYENPASEFVYHFLGDSNRLKVADQDIQFRPHEVLLSKVAAADHQAGIVRDIRPLGAITRVTMKVEGQDEPIEAEVSRDDINLQGLQRGATLFFKPKAS
>NZ_CP043320.1|WP_151184461.1|1368677_1369529_+|sulfate-ABC-transporter-permease-subunit-CysW
MSSTSSHNSSNASSWARLALIIAAWATFIVFLVLPLTIVLTEALKMGVAHFFDSMLEPDAISALKLTLLAVAISVPLNLVFGVAAAWCVSKHDFYGKSVLITLIDLPFSVSPIIAGLVYVLLFGAQGFFGEWLMEHDIQIIFAVPGIVLATLFVTVPFVARELIPLMQQQGTQEEEAARLLGASGWQMFWHVTVPNIKWGLMYGVVLCTARAMGEFGAVSVVSGHIRGFTNTLPLHVEILYNEYNHVAAFSVASLLLILALLMLLLKQWSESRINRQLNNGDE
>NZ_CP043320.1|WP_151184460.1|1367848_1368667_+|sulfate-ABC-transporter-permease-subunit-CysT
MSRRTSPVIPGFGLTLGYTLVYLSLLVFIPLAGMFIYAAQLSWSEFYAIVSAPRVVAALKLSFGTAFIAALLNGVIGTLFAWVLVRYRFPGRKVIDAMIDLPFALPTAVAGIALTALYSPNGFIGHWAADFGISIAYTPFGITLALTFVTLPFVVRTIQPVLADIPRELEEAATCLGARPLQVFRHVLLPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPGKTEILPLLIMVKLDQYDYVGATAIGVMMLMVSFVLLLLINLLQRYVAKG
>NZ_CP043320.1|WP_151184459.1|1366900_1367539_-|peroxiredoxin
MSIQLGDIAPDFQQASSAGDISFHQWLGDSWGVLFSHPADFTPVCTTELGFTAKLKDEFAARNVKAIALSVDPVDSHHKWIKDINETQGTTVNFPILADDDRKVSKLYDLIHPNADNTLTVRSLFVIDPNKKVRLTITYPASTGRNFHEILRVIDSLQLTDNYKVATPANWIDGEDVVIVPSIQDKAELVERFPKGYTAVKPYLRLTPQPNR
>NZ_CP043320.1|WP_151184458.1|1366243_1366828_-|alpha/beta-hydrolase
MRQTTDVRYLIVPGWQGSPAEHWQSHWQQVLPECTRVEQDDWLLPQRQAWIAQLEAQIAADQRPVVLIAHSLGCVTVAHWAAQASAGLLARVRGALLVAPADVERIDCPAALVNFAPIPTEPLPFPSVLIGSSNDHAADAQRAVLFARQWGSTVTILSQAGHINVQSGHHRWEQGFAWLYQLQERSDRGYQRSA
>NZ_CP043320.1|WP_151184457.1|1364631_1366191_+|methyl-accepting-chemotaxis-protein
MTSDKTITLVLQIASLVALAILWWLSAPIWTSAVLLVPAFVVPLLQRPVLVEPSSQGTVQATELARHLSHTTTASALSAAAVSHAAQQLQQRLVSLVNSAQRIESSAGQMITTEEATAQLSEESLDAASNVRSNSQAGQTSLEQAILSMQTLAQQADSSRTLIDNLSQRSSEIQQVAAVIKGIASQTNLLALNAAIEAARAGEYGRGFAVVADEVRGLASRTADATEEVDRMLQDIQQHTIEVAEQQHKLIEDLNSSVVLVENAGAQLIDITALAVNVEQQVANIVSGTQSNRMQLDDLFKEVAQIRQDLSDSDQQTAQLSQSAVLLEAQTEGVSEKLSEVSLSEYHQHIYELAQDAAQKIGAQFERDIAQGRISEAELFDRNYKEIANTNPKKYSTAFDKYTDQVLSAIQEPVLTQNPNTVFAITSTPQGYIPTHNTVYSQPLTGDYQHDYLNNRTKRIFNDRVGARCGNHQKPLLLQTYIRETGEHMHDISVPIYVHDKHWGGFRIGYHPEKTSRTN
>NZ_CP043320.1|WP_151184456.1|1363457_1364273_+|hypothetical-protein
MRLTDTVLHDCFYHPSTGLTLDPARDFGLPLYECNARLKAVRSSLDRQQQLLWANNGPAVLVWLQGPDCSGKDGVIRNCLRGLNPQGVRVSSFAKPTEQQRQENFLERFRQQLPPPGMLTVFNRTPYESIVSDLADGYIDDAQAAGRLQQMLAFEAQLAQQNIHLIKVYLHISKDEQKRRLQQRFAKPEKHWKISAADLAGHRLFATIENNWDHTFKQSSTASHPWHIVPANNKPLRNLLFCSLLAQKLEALNLQWPQPELPFALEDLDII
>NZ_CP043320.1|WP_151184455.1|1362448_1363456_+|nucleoid-associated-protein-YejK
MSIHHCIIHFIEKKPEDSPATVQLGEEVLPNSTAVQHLLADLNDSYNSKPSKAWGLFQADSTQWPLQSWLSNYLAEQSDFVQFSQQAVEHLKKQIDENSLSLSGHVLFAHYQHGMTEHLIIAVLQHSDGMLISEGLDVETARHLDLSQLHLAARINLSEWKNNSQSKQYISYLKGKFGKKIIDGFLDFLGCEEGVDGPSETRTLLKAFSEFVESEDLPEEKAREQTNNLISYANTQTRRGEVVSIEGLSEVLDEENPQAFYNHIRNKDYGLSPEIPADKRTLSAFHRFTGRAEGISISFESHLLGSKVEYDESRDMLIIRQLPTQLKDQLKRSKD
>NZ_CP043320.1|WP_151184454.1|1361041_1362370_+|C4-dicarboxylate-ABC-transporter-substrate-binding-protein
MNRILQDVSIMLRANLWLVPILAALVTGLFYFVAPPPPMHATMSTGGPHGGYTSFAEKLRIELAKEGFELELVNSSGSRQNTERLLDENSGINIALMQSGQELGLNAQQRQKLYNLGAVYQEPLWLFTRSDVEINTLRDLLPLRTAVGSARGGTRMMINPLLEANQIDSANLPDTWRPYSGKKALSRLLDDQLDAAFFLGPAEGAIVQQAASHSELQLVHFKQAAAYRARLPFITEINVGQGLLNLASDQPHQDTTIISPVAMLIANESFHPALTALILAAAQEVMKSGSLIDAPDTWPQNLPHDFSKLTEAEYFHNKGLPLLQRYLPFRIASLADRYIILVIPLLVLLFPLFKVAGPLYRWRIRARIYRWYKYLRDVDKRFTNHTLPEHLDSEIKRLTELQVELAKVEVPLSYTNELYELHLHVRYVLQRLERLKTAHSAA
>NZ_CP043320.1|WP_151184453.1|1359587_1361009_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MHNILIVEDEPIIRSALRRLLERNQYKVSEAGSVQEAQEQHDISAFDLIISDLRLPGAPGTEMIKLAEPKPVLIMTSYASLRSAVDSMRLGAIDYIAKPFDHDEMLQTIARIIHDHQQSAALAADCDDESTALSETPVVDNSDIGIIGSSPAMQALYVKIRKVAPTDSNVLIQGESGTGKELVARALHNLSSRAKAPMISVNCAAIPETLIESELFGHEKGAFTGAVSARTGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVNVRLVAATHRDLKHLAKTGGFREDLYYRLHVIALHLPALRDRGNDVVEIADILLDRQRLRMHKDPMSFTEQASKALQKYSWPGNVRELENALERAVILCEGTQVTTELMGIDVDLAAEKSAQDTADVAAEAEADADAQQLDASKLSLEDYFQHFVLEHQDQMTETELASKLGISRKCLWERRQRFGIPRRKSSGT
>NZ_CP043320.1|WP_151184463.1|1370734_1371505_-|STAS/SEC14-domain-containing-protein
MLKQIPAPDHLIALKLDGKLSAEDVQTYHSILEKKLLQHAQIGIYVDLTDLTDMTANALIEGTKADLVLFSHLKQLSRCAFVSDKEWPQTLISAAQHLLPVLDLKIFPSSQSEKALAWAAELRDTTAVIKPAIRFLATSKADVLAFEVNGLITSEEMPDVIKQLEDFFAAHDKVRLLNRMKNFAGFDPLILMQSSLISMKLTAMNRLERYAIVGAPNWMCKAVDAINPLFTDIDIQTFSADQEDQAWAWLDAELVE
>NZ_CP043320.1|WP_151184464.1|1371698_1372430_-|ATP-binding-cassette-domain-containing-protein
MFLDLDLTKTMRSGKSEFHLGLAFASSSERLVVLGPSGSGKSLLLQMIAGLLKPDSGHLKLAGRTLFDQKQGINLTPQQRQVAFLFQNYALFPHLSVRQNVAFSLRTGLLNPSAKMANKTVDYWLDNFGLEPVQHQKPHELSGGQRQRTALARALVTEPRALLLDEPFSALDPDLRIHMRKELRELQERLAVPLILITHDVEDVKVFAEQTLCLKEGQIDLQRQHSMQVSQQALCCAKHVHGC
>NZ_CP043320.1|WP_151184465.1|1372434_1373112_-|molybdate-ABC-transporter-permease-subunit
MDAVWVALSLSLKVAGWATALNIILGISVGFFLARSRFPGRDLLDTVLTLPMVMPPTVLGYYLLVLVGRRSAFGAWLYDTFGINLIFTWQGAVIAATVVAFPLVFKPARAAFEAVDGQLEQAARVLGVSELAIFFRITLPLAWRGILAGVLLAFARALGEFGATLMVAGSIPGRTQTLSIAVYEAVQAGKDDTANMLVVITSIVCVVVLLSASRLAPGRVSERIR
>NZ_CP043320.1|WP_151184466.1|1373127_1373883_-|molybdate-ABC-transporter-substrate-binding-protein
MLKKNLKTLLAAALISASGSAWAAEITVSAAASLTNAFKDIAANFEAAHPEHKILLNFAGSGELLQQIAKGAPVDVFASADQITMDKAQEQGLLNEASRTDFVRNTVVVITPTHSTLKLIELADLQQAALQRLAVSNPESVPVGRYSKEALLAHELWDALADKMINTQNVRQSLDYVARDEVDAGFVYATDAAIMADKVKVQFTVPLQTVVSYPIAITKEGSSKELSQQFIDYTFSEASQAVFNSYGFSQP
>NZ_CP043320.1|WP_151184467.1|1374018_1375218_-|molybdopterin-molybdotransferase-MoeA
MALLNVDAALQILLEQAQAAADLETELLSLDSAENRVLAEPLLAQFAMPPWPNSSMDGYAVRSAEVQAGQVLPVSQKIFAGHSPEPLTEGTCARIFTGAPMPEGADAVEMQENTEELDDGTVRFAQAVRAAKFVRPKGQEALPGDEILPAGIRLGPIELAMAASMGCAQVKVRRQFRVAVISTGDELVEPGQPLAPGQIYNSNRTLLIQCLKRLGCAIVDMGILPDDIQLTRNRLAELQGVDLMLSSGGVSVGEADYLGQVLREEGELDFWKLALKPGKPFTLGRYQGVPVIGLPGNPTSSLVTFLILARPYILTRMGVSDPLAQSFVVPVNFAMPVAGVRREFIRVSLVDGRAEKLDNQCSGVLRSATQSHGLLELPENTTCEVGDYLRFWPFSSLLN
>NZ_CP043320.1|WP_151184468.1|1375219_1375756_-|molybdenum-cofactor-biosynthesis-protein-B
MSHVSSQFVPLNVALLTVSDTRTPETDTSGQYLFDQLIKAGHTVVERMILKDNLYQIRAQVASWVASDDTHVVLITGGTGFTDRDSTPEAVSCLFDQHVEGFGELFRHISYTEIGNSTIQSRALAGLSNHTLICCMPGSTNACRTAWEGILIDQLDASHKPCNFVAHLGKKTACSGRD
>NZ_CP043320.1|WP_151184469.1|1375823_1376426_+|molybdenum-cofactor-guanylyltransferase-MobA
MPNIPLFADCSIVLLAGGRGQRMGGQDKGWVSWQGNALIEHMQRVVRPLTNDLIISCNRNHARYQPLADQLVSDPDHDFTGPLVGIISALKVARHPYLIVLPCDAPRIDQALLMQLYQQAGERPAMFKHQGHWQPLFSIIAKAQLSALQELWEAGERSPKHALLQLNPVALHCADDEKRLANFNDPSVLQQPLLIKETLC
>NZ_CP043320.1|WP_151184470.1|1376419_1376896_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MLTHLDEHGRANMVDVTEKANTQREATAESWVRMLPSTLAMITDGEHPKGDVFAVARIAGIQAAKRTHELIPLCHPLLLTSIKVHLTAHAPDQVHITATCKLSGQTGVEMEALTAASVAALTIYDMCKAVDRAMVIERTQLLEKLGGKSGHYQLDSAT
>NZ_CP043320.1|WP_151184471.1|1376918_1377167_+|molybdopterin-synthase-sulfur-carrier-subunit
MLTVQFLARYREALDCESEQLPWQPEWQTIEDVRNFLVARDGVWTVLSDPRIMCALNQDVCSLQEPLKAGDELAFFPMVTGG
>NZ_CP043320.1|WP_151184472.1|1377172_1377640_+|molybdopterin-synthase-catalytic-subunit-MoaE
MSIRVQTAPFDPGAELNAVHAGDLSVGAVATFTGYVRDINQDQSIKELFLEHYPGMTEKALAKIRDEALQRWPLIDAHILHRVGPLSLAEPIVFVATSSMHRDAAFAACEFIMDYLKIRAPFWKKEQTATGTHWVDGRDSDTDAAARWDTEKDKR

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Crispr_ID: NZ_CP043320_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043320_3

1420787-1420938

Orphan

Consensus_repeat	Method
TTTTTTCGTCGGTTTTTGACCTGCATTCCGTAGTCTGAAGCTGGTGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043320_3

>merge|NZ_CP043320|3|1420787-1420938|CRISPRCasFinder
TTTTTTCGTCGGTTTTTGACCTGCATTCCGTAGTCTGAAGCTGGTGCTTATCTGTCAGCCTTTAACAGCTTGTACGTGGCATAGCGTGCTTCGGGATGGGTATTTTTTTCGTCGGTTTTTGACCTGCATTCTGTAGTCTGAAGCTGGTGCTT

>NZ_CP043320|3|3|1420787-1420938|CRISPRCasFinder
TTTTTTCGTCGGTTTTTGACCTGCATTCCGTAGTCTGAAGCTGGTGCTT	ATCTGTCAGCCTTTAACAGCTTGTACGTGGCATAGCGTGCTTCGGGATGGGTAT
TTTTTTCGTCGGTTTTTGACCTGCATTCTGTAGTCTGAAGCTGGTGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043320.1\|WP_151184498.1\|1411432_1412122_+\|crotonase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|235744
NZ_CP043320.1\|WP_151184513.1\|1431661_1434574_-\|FimV-family-protein	unknown	unknown	gnl\|CDD\|225711
NZ_CP043320.1\|WP_151184508.1\|1427096_1427726_-\|SPOR-domain-containing-protein	unknown	unknown	gnl\|CDD\|225689
NZ_CP043320.1\|WP_151184511.1\|1430135_1430780_-\|phosphoribosylanthranilate-isomerase	unknown	unknown	gnl\|CDD\|234923
NZ_CP043320.1\|WP_151184509.1\|1427831_1429109_-\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|182774
NZ_CP043320.1\|WP_151184510.1\|1429112_1430054_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	unknown	unknown	gnl\|CDD\|235547
NZ_CP043320.1\|WP_151184506.1\|1424906_1426421_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP043320.1\|WP_151186025.1\|1412164_1412926_-\|spermidine-synthase	unknown	unknown	gnl\|CDD\|223498
NZ_CP043320.1\|WP_151184501.1\|1415345_1416614_-\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP043320.1\|WP_151184504.1\|1422191_1423514_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240554
NZ_CP043320.1\|WP_151184496.1\|1409101_1410076_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277358
NZ_CP043320.1\|WP_151186024.1\|1411017_1411254_-\|sulfurtransferase-TusA	unknown	unknown	gnl\|CDD\|178967
NZ_CP043320.1\|WP_151184512.1\|1430791_1431658_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP043320.1\|WP_151184497.1\|1410075_1410966_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|179257
NZ_CP043320.1\|WP_151184507.1\|1426506_1427004_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP043320.1\|WP_151184499.1\|1413119_1413686_-\|elongation-factor-P	unknown	unknown	gnl\|CDD\|234788
NZ_CP043320.1\|WP_151184502.1\|1416702_1417851_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP043320.1\|WP_151184505.1\|1423594_1424806_-\|O-succinylhomoserine-sulfhydrylase	unknown	unknown	gnl\|CDD\|181244
NZ_CP043320.1\|WP_151184500.1\|1413729_1414866_-\|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP	unknown	unknown	gnl\|CDD\|378385
NZ_CP043320.1\|WP_151184503.1\|1418342_1420628_+\|YgiQ-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|234928

Protein	Function_ID	Function_description	E-value
NZ_CP043320.1\|WP_151184498.1\|1411432_1412122_+\|crotonase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|235744	PRK06213, PRK06213, crotonase/enoyl-CoA hydratase family protein.	4.07568e-135
NZ_CP043320.1\|WP_151184513.1\|1431661_1434574_-\|FimV-family-protein	gnl\|CDD\|225711	COG3170, FimV, Tfp pilus assembly protein FimV [Cell motility and secretion / Intracellular trafficking and secretion].	4.52973e-75
NZ_CP043320.1\|WP_151184508.1\|1427096_1427726_-\|SPOR-domain-containing-protein	gnl\|CDD\|225689	COG3147, DedD, Uncharacterized protein conserved in bacteria [Function unknown].	3.87383e-21
NZ_CP043320.1\|WP_151184511.1\|1430135_1430780_-\|phosphoribosylanthranilate-isomerase	gnl\|CDD\|234923	PRK01222, PRK01222, phosphoribosylanthranilate isomerase.	5.25806e-104
NZ_CP043320.1\|WP_151184509.1\|1427831_1429109_-\|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase	gnl\|CDD\|182774	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional.	6.76335e-153
NZ_CP043320.1\|WP_151184510.1\|1429112_1430054_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta	gnl\|CDD\|235547	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta.	0
NZ_CP043320.1\|WP_151184506.1\|1424906_1426421_-\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP043320.1\|WP_151186025.1\|1412164_1412926_-\|spermidine-synthase	gnl\|CDD\|223498	COG0421, SpeE, Spermidine synthase [Amino acid transport and metabolism].	1.7868e-39
NZ_CP043320.1\|WP_151184501.1\|1415345_1416614_-\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	2.61086e-140
NZ_CP043320.1\|WP_151184504.1\|1422191_1423514_+\|MATE-family-efflux-transporter	gnl\|CDD\|240554	cd13149, MATE_like_2, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	4.36988e-78
NZ_CP043320.1\|WP_151184496.1\|1409101_1410076_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277358	cd07413, MPP_PA3087, Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.78786e-88
NZ_CP043320.1\|WP_151186024.1\|1411017_1411254_-\|sulfurtransferase-TusA	gnl\|CDD\|178967	PRK00299, PRK00299, sulfurtransferase TusA.	1.22781e-39
NZ_CP043320.1\|WP_151184512.1\|1430791_1431658_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	6.97002e-128
NZ_CP043320.1\|WP_151184497.1\|1410075_1410966_-\|NAD(+)-kinase	gnl\|CDD\|179257	PRK01231, ppnK, NAD(+) kinase.	0
NZ_CP043320.1\|WP_151184507.1\|1426506_1427004_-\|CvpA-family-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	4.15962e-33
NZ_CP043320.1\|WP_151184499.1\|1413119_1413686_-\|elongation-factor-P	gnl\|CDD\|234788	PRK00529, PRK00529, elongation factor P; Validated.	1.68694e-90
NZ_CP043320.1\|WP_151184502.1\|1416702_1417851_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.97168e-88
NZ_CP043320.1\|WP_151184505.1\|1423594_1424806_-\|O-succinylhomoserine-sulfhydrylase	gnl\|CDD\|181244	PRK08133, PRK08133, O-succinylhomoserine sulfhydrylase; Validated.	0
NZ_CP043320.1\|WP_151184500.1\|1413729_1414866_-\|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP	gnl\|CDD\|378385	pfam10093, EarP, Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This entry includes family members such as EarP enzymes which are essential for post-translational activation of elongation factor P(EF-P). It was identified as EF-P arginine R32 specific rhamnosyl transferase in Shewanella oneidensis using dTDP-beta-L-rhamnose as donor substrate. This was further confirmed for Pseudomonas aeruginosa, Pseudomonas putida, and Neisseria meningitidis. As for S. oneidensis and P. aeruginosa, EarP enzyme acts as an inverting glycosyltransferase, thus mediating the formation of an alpha-L-rhamnosidic linkage. Structural analysis show that EarP is composed of two opposing domains with Rossmann folds, thus constituting a B pattern-type glycosyltransferase (GT-B) and provide basis for arginine glycosylation by EarP. Mutational analysis of efp and earP genes, resulted in a substantial decrease in the production of rhamnolipids and pyocyanin (important factors for colonization and invasion during infection) of P. aeruginosa. Collectively this indicates that EarP and EF-P are essential for P. aeruginosa pathogenicity.The protein family is also annotated in the CaZy Database as GT104.	0
NZ_CP043320.1\|WP_151184503.1\|1418342_1420628_+\|YgiQ-family-radical-SAM-protein	gnl\|CDD\|234928	PRK01254, PRK01254, YgiQ family radical SAM protein.	0

>NZ_CP043320.1|WP_151184503.1|1418342_1420628_+|YgiQ-family-radical-SAM-protein
MHAAKPLYDYPKYWAECFGPAPFLPMSRAEMDQLGWDSCDVIIVTGDAYVDHPSFGMAVIGRVLEAQGFRVGIISQPDWRNKDDFMQLGEPNLFFGVAAGNMDSMINRYTADRKVRSDDAYTAGALAGKRPDRASLVYTQRCKEAYSNTPIVLGGIEASLRRIAHYDYWQDSVRRSILMDSTADILLYGNAERAIVEVAQRLSWGESIADIDDIRGTSFIRRNTPSDWFELDSTRIDRPGRVDRIINPYINTQDTEACAVEQQSAAQTGQDDVQIVQLLDHPRLTRERTVIRIPSFEKVRNDPVLYAHANRVLHLETNPGNARALVQRHDNQDVWLNPPPIPLTTEEMDYVFGLPYARVPHPIYGKAKIPAYETIRFSINIMRGCFGGCTFCSITEHEGRIIQNRSHDSIVQEIEDMRDKVPGFTGVVSDLGGPTANMYRLACSSPEIEAACRKPSCVFPGICQNLNTDHTSLIELYRKARDIPGVKKVLIASGLRYDLAVESPEYVRELVTHHVGGYLKIAPEHTEEGPLEHMMKPGIGNYDRFRKMFERFTKEAGKEQYLIPYFIAAHPGTTDTDMLNLALWLKKNNFRADQVQAFYPSPMATATAMYHSGKNPLRKVTYKSPATEIVKSEEQRRLHKAFLRYHDPKSWPQIREALMRMGRSDLIGDGKQHLIPAQQPHADGYRSARRKNSTPAKGEKAARPLLTQHTGLPPRTTGATDDKPQWHKREQAKAAAEAKLRAERGKKPAAKGGKRKPAKPR
>NZ_CP043320.1|WP_151184502.1|1416702_1417851_-|cation-transporter
MDGRQSAQARNKAMRTTSVVGAIVNLVLTIAKVVFGVIGQSHALIADGVHSLADLSTDLMVWFAAKYSNQPADKEHPYGHARIETAFTVGLGVVLILTAIGIVVDSAQRLLNPETLLQPTSIVLWIAAISILANEGLYHYTMRVARQFNSGLLKANAWHHRSDAISSVVVLLGVAGSLMGLPYLDAFAALAVALMIGHVGWTQAWTSIRELVDTGLEPKTASALKRIIKTIEGVQGVHMLRSRRMGGVYLIDVHIVVDERLSVSEGHKISEYVRLKLIDSHEYISDALVHIDAEDDSVAALCTDSPMRREVLTDLRRVWADQIEAEELEQVTLHYLNGKVHVDLVRSMQTVDANAQQLIERLQEQAQALDYIGEVKVLYRYP
>NZ_CP043320.1|WP_151184501.1|1415345_1416614_-|tryptophan-permease
MTAIHTLSKPTRFGGAMIVAGTAIGAGMLANPTATSGVWFVGSVLLLLYVWFCMYVSGLMLLEATLHFPQGASFHTVVKGLLGPRWNIITGLAVTFVLYSLTYAYIFVGGGLTQNSLSALSGWVFDQPLQPSRQLASVVFLLVLATSVWVSTKLVDRFATVLIGGMLISFFLSTGSLIQSATASVLLNLPVQDQHSYWPYIWAALPVCLASFGYHGNVPSLVSYYNKHAQPVARSILWGSLLALAMYVLWQLAVQGNLPRAEFAPVIAADGDVAVLLQVLSTYVKTDNIGRILSAFAYMAIASSFLGVTLGLFDYIRDLCHFSDTAGGRFKAALLTFLPPLFACLAFPTGFVKVMGYVGLMAAIWAALVPALLVRASRKRFTSTSYQVFGGTFMIGFVLLFAVAAFFAQVLLLLQALPVFKG
>NZ_CP043320.1|WP_151184500.1|1413729_1414866_-|elongation-factor-P-maturation-arginine-rhamnosyltransferase-EarP
MRARWDIFCRVIDNFGDIGVTWRLAQQLSQEHPFDVRLWVDDLSAFHAICSAVVSTAEQQVVDGVDVCLWPDESSITQYDCADVVIEAFACQLPESYIALMRSKQQVLWLNLEYLTAEPWAAECHALPSLQSGGLQKYFFFPGFTGQTGGLLREADLLSRRDAFLNSNTLRADYLASLAVQAQQGERLISLFAYANPALPSWLDALSQDSRSNRLLVLQGPLQSSVASWFAIKELKIGEIYQRGSLTVQALPYIEQKNFDQLLWCCDLNCVRGEDSFVRAQWAAKTLLWHIYPQQESAHLDKLEAFLSIYNNDLGEQAKHALNSLHRAWNQQDDMHAPWQQFVAQEHALQKHAKHWSAQQKKQPDLATKLACFYQDWL
>NZ_CP043320.1|WP_151184499.1|1413119_1413686_-|elongation-factor-P
MKTAQEFRAGQVANIDGSPWVIQKTEFNKSGRNAAVVKMKLKNLLNGTAAESVYRADDKFEAIILDRKDVTYSYFADPLYVFMDSEYNQYEVEKSDLEAVLPYIEDGMSDECAAVFYDDKVISIELPNTIVREIIYTEPAVRGDTSGKVMKTARLSTGHELQVSSFCEIGDSIEIDTRTGEYKSRIKA
>NZ_CP043320.1|WP_151186025.1|1412164_1412926_-|spermidine-synthase
MLVEQAEKRILTQEKDKYGVISVVESNGFRYLQFGNDIEQSCVLYENPLWLKYDYTRAMLLGSLCHAHPETALFLGLGAGSLTEVCLAVLPLEDVEVLELREALPRLAVDYFGMSDDPRLTIRIGDALELIESAETADLIFLDMYTDSGPSVGHLAWNFLQACQDKLNLGGWLIINQWATLDGRPLGAALLRGIFYRHYWEIPVKEGNVILLVPSSFEQSPPIPLLRQQAARVAEHLGYDISYLIEMIRPASE
>NZ_CP043320.1|WP_151184498.1|1411432_1412122_+|crotonase/enoyl-CoA-hydratase-family-protein
MSELIHYSCNQGIATLTLNNGKVNAISPDMITAFNSCLDQAEQDRAIVIITGQPGILSGGYDLKVMTASPESAINLVASGSTLARRMLAHPYPIIVACPGHAIAKGAFLLLSADYRIGVDGAFNIGLNEVLIGMTMHHAGIELAKDRLSKAAFQRSVINGELFSPVAAIDAGFLDRVVPAEELMQSALGVATLMKKINMKAHRNTKLKVRKSLLEALDAAIELDKAHLA
>NZ_CP043320.1|WP_151186024.1|1411017_1411254_-|sulfurtransferase-TusA
MLIEADAELDARGLFCPEPVMMLHTKVRELAAGEVLKVSATDPSTQRDIPKFCTFLEHQLLDSSEEDGTYTYFIRKKL
>NZ_CP043320.1|WP_151184497.1|1410075_1410966_-|NAD(+)-kinase
MEQFRNIGIIGRMGSIRVLDTIRRLKRYLIGRHLHVILEDRIAEMLPGHNLQTSSRKLLGEVCDLVIVVGGDGSMLGAARALAQHKVPVLGINRGSLGFLTDILPEHLESQISEVLAGNYTTEQRFLLEAEVRRDGVTIGEGDALNDVVFHPGKSTRMIEFELFIDGQFVYSLKADGLIIATPTGSTAYALSAGGPIMHPRLDAIVIVPMHPHTLSSRPIVVDADSELKVVVAEDMSIYPLVSCDGQNHVTCAPGDTLHVQRKPQKLHLIHPLDHNFYAVCRDKLGWGSRLGQDNK
>NZ_CP043320.1|WP_151184496.1|1409101_1410076_-|serine/threonine-protein-phosphatase
MWIDPARNYDLIGDVHGCAQSLERLLALLGYKKHAGVWQHSDRQALFLGDLIDRGPQIRETLHIVHAMVEAGHAISIMGNHEYYALAWNTTLEHGGEEAYVREHSAHHARLQRETLEQFAEHPYDWQDFNQWFLTLPLFIDADRFRAVHACWDDRLIHTLRNRFADGRIDTEFIRQSATSGSFADQAFNRLLRGVNLPLPYGMSLIGQDGYRRSSFRTKFWHDEQPALTYGDAVFQPDALPEHIAQKPLPAQYLRQINAYDAEQPLLFVGHYWRQGQPSLIRPNLACLDYSAVNGGKLVAYRLGQEQQLLPQNFVWVDAHEQGH
>NZ_CP043320.1|WP_151184504.1|1422191_1423514_+|MATE-family-efflux-transporter
MQKKYLADQSLPRALFSMTWPMLFGAVALMSFQLVDSIFISMLGMQPLAALGFSLPLQQLLIGVQIGIGIAATALISRAIGAGNLDHAKYMGGLVVITGCCVSFILCTLIWLLRMPLLNALGAGAELLPYTESYWLPWLSSAWLGAFLYFANSISRANGDTRLPGLMMVFTSVLNMLLDPLFIFTFGLGLPGAAYATIVACLAGAAIMYSRILKRHWLAFDPSKLPIAAALREIAKTSAPAMLSQLMPGTASLLATRIVAGFGGSAIAAWTLGSRLELFSIVIVLALTMALPPMIGRLYGSKQLDRAHSMVLVAVRFVIGLQLTIALLWMASRGLIAPALAPDQDSEVYLLSYMLWVPFSYAALGVCMLMVSVCNALGMPMRAVWISTLRLFFCYLPALWVGASIAEMSGLYIGVLLGNVAAGLLAWNLYKRGLQHIQKT
>NZ_CP043320.1|WP_151184505.1|1423594_1424806_-|O-succinylhomoserine-sulfhydrylase
MTTDWQAGRLNSELTDAGFDTLAVRAGQQRSFEAEHSEAIFTTSSYVFRSAADAAASFAGERESNVYSRYTNPTVRTFEERLAALEGAEKCVATASGMSAVLATVMSLCSMGDHILVSRSIFGATVSLFDKYCARFGIEISYVQIDDLAAWQGACTEKTKLLFIESPSNPLAELADIRALSEIAHAANALLMVDNCFCTPVLQKPLALGADIVIHSATKYIDGQGRCLGGAVLGSAELMKEVVGFLRTTGPTMSPFNAWVFLKGLETLRLRMNAHCQSAQQLAQWLEQQPKVKKVYYSGLASHPQHELAKQQQSGFGAVVSFEVEGGKEAAWRCIDATRMISITANLGDTKTTITHPGTTTHGRLPAEERVKAGIHDGLIRIAVGLEEFADIQADVQRGLNAV
>NZ_CP043320.1|WP_151184506.1|1424906_1426421_-|amidophosphoribosyltransferase
MCGIVGIVGKSNINQALYDALTVLQHRGQDAAGMVTSKNGRLFLRKDNGLVRDVFRTRHMKELIGNVGIGHIRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNVEQLAKEIYQSDLRHVNTNSDSEVLLNVFAHELSVCGKLQPGKEDVFAAVSRVHQRCRGGYAVVSMITGYGVLGFRDPNGIRPIVFGQRHTDDGVEYMIASESVALDVLGFTLIRDLAPGEAVYITEDGQLHTRQCAANPVLNPCIFEHVYLARPDSIIDGVSVYKARLRMGEKLADKILRERPDHDIDVVIPIPDTSRTSALELANRLGVKYREGFVKNRYIGRTFIMPGQAERKKSVRQKLNAIELEFRGKNVMLVDDSIVRGTTCKQIIQMAREAGAKNVYFCSAAPAVRYQNVYGIDMPSVHELIAHNRSTEEVAQLIGADWLLYQDLEDLVESVQGGKIQIDQFDCAVFNGEYVTGDIDAEYLQRIENERNDLSLIAEQVSQATIGLHNSEAD
>NZ_CP043320.1|WP_151184507.1|1426506_1427004_-|CvpA-family-protein
MSFNWADALILSIIVISSLISLSRGFVKEALSLVTWIVAAVIAWMFGGSLAHHFQPYIDTHSIRVIAACAILFLVTLLIGALVNFLITQLVRATGLTGTDRLLGMVFGAARGLVLVIILIGLLSLAPVEHDAWWQQSTLIPHFLLIADWSKNLILGLSGVWISAA
>NZ_CP043320.1|WP_151184508.1|1427096_1427726_-|SPOR-domain-containing-protein
MAAAESKLKQRIVGAIVLVALAVIFLPMLFKQEDTAREVVVQVPPMPEAPAVPQVPVAEVAVPEPEADDTWDEPLIPETPAAPQSLPDAPVPAEKPVAEVQPAPVQPDVKAEPQPELQQPTPQAVEPGIDKNNLPVSWSVQLASLTNKDNAQALRDSYRDKQYNAYVRSADGTHRVLIGPLIKQEEAQAMCKRLKSREGQDCFVVRYEP
>NZ_CP043320.1|WP_151184509.1|1427831_1429109_-|bifunctional-tetrahydrofolate-synthase/dihydrofolate-synthase
MQARDLQQWLSYLEQLHPNEIDMGLLRVHAVAQRLGLPRIANKIITVTGTNGKGSTCAFLASLLAQHGLKVGVYSSPHLLKYNERVRIDGQNVTDQQLCDAFTAVEQARSDTSLTYFEMGTLAAFWLFAQASLDVAILEVGLGGRLDAVNIVDPDIAVVTNIGLDHSDWLGSTRDSVAYEKSGIFRAGRPAICGDLFPPEQLLNQSALLNAPLLLRGRDFDLAISPDSWHWRCVDAQGHLTQLQDIPLLRLPIENAALALQVYALLGLPWQAEALVRGLSNARMTGRLQELQLGYQGRILHMMLDVAHNPHAASYLAERLKSQPIQGRRLAVLGVLDDKDLVGVLDCMQEQITDWAVAALPTVRSCKVEYLQHTLESRQATVTSYASIAQAIEAQCAQAAEDDQIIVFGSFYTVAEALKWLERDA
>NZ_CP043320.1|WP_151184510.1|1429112_1430054_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-beta
MNNWLVDKLIPSIMRSETKKSSVPEGLWHKCTSCDAVLYKPELEKTFDVCPKCNHHMRINARTRLDIFLDKEGREEIAADLEPTDRIRFRDTKRYRDRITAAQKQTGEKDALIAMSGTLEGMPVVAAAFEFAFMGGSMGAIVGERFVQAANVALEQRCPLICFSASGGARMQEALISLMQMAKTSAVIARLREESIPFISVLTDPVYGGVSASLAMLGDVIVAEPNALIGFAGPRVIEQTVREKLPEGFQRSEFLLEHGAIDMIVPRAELRPRVASVLRQLMDMPTIPVVAVDAVVESEAAKVSVASDSEARA
>NZ_CP043320.1|WP_151184511.1|1430135_1430780_-|phosphoribosylanthranilate-isomerase
MRVRTKICGITRVEDAVVAAQAGADAIGLVFYAKSPRAVSVAQAQKIVAALPPFVTVVGLFVNAARSEVNAVLDSVPLDVLQFHGDETPAECEAFSRPYFRALRMQPGLDIAALSAQYSGAQGVLLDAWVPGVHGGTGERFDWARIPENLAKPLILAGGLNADNVGQAVRQVQPWAVDVSGGVEVSPGIKDAEKIRKFLYAVHMNNTQLCDGSL
>NZ_CP043320.1|WP_151184512.1|1430791_1431658_-|tRNA-pseudouridine(38-40)-synthase-TruA
MSIETTPTAALEAAVGVSRIALGVEYKGSNYHGFQLQVAGTPSVQGCLEEALQQINAGRPVRLSCAGRTDAMVHACGQVIHFDTDIERPMRAWVMGANRYLPKDISVVWAQSMPLDFHSRFSAVARRYRYVIYSDEIRPAHLAEEVTWTHQVLDIEKMRAAARCFVGTHNFNAVRASGCQAHSPVRTIHHLQLFEFGKLIIIDVRANAFLHHMVRNLAGILMMIGAGERPVEWAQAVLESCDRKAGGVTAPPHGLYMVQVEYPEQFKLPERYLGPHFLSGLPDSFADK
>NZ_CP043320.1|WP_151184513.1|1431661_1434574_-|FimV-family-protein
MLQVRKLVLAVAAATAFSSSFTHALGLGDLAVKSSLNQPLEAEISLLEVRDLTAIEIKTQLASPEEFSKAGIDRQFFLTGLKFSPVIGANGKPFIRVTSSKPVKEPYLNFLVEVLWPNGRLLREYTLLLDPPLYKPQQVIYAPQPAVTAAAPRAVQAAPRQVRQPQPVARTAAPTRTALQGTDYRVQKNDTLWVIAQRTGGSASVHQTMLAIQDLNPNAFIDGNINRMKSGQVLRLPTEQDIRSRSRADAIAQVSQQNTDWKAGRAAPARAERQLDATHRTTAGAAPAQIEKADSLRLVADAPGQAGQAADEGSAASLQNLQDQLALSKERLDSTRLENEDLASRVEDLNSQLDKLKRLIELKDNQLAQLQSSVDAPLEPTDAVVVDGSSETVDAVDATAVVEASIETLDQAEATVADSIEAIDTVQEPTVAEVEADAQAEAEVAPEPETLEPVTPEVEPVTPEAEAVEPEVPAVTQPAAETAEEKSIVDRVMDDPMLLAATGGAAILALLLLLMAISRNRARKEAELYDEQLSETLTPDDSPLEAPETDVLAASSLAAESDAFDTDFAFEEPVADTQFKQEAADPIAEANSYISFGRFNQAADVLHAAIEQEPQRTDLRLKLLEVCADLEDHGGFSRQITEITEIGGVESELEHLKARYPHMLGAEQVANIADDLNDDDFADLSLDDITLDSPYLLSATSTEQLDTELDDLSALLADADTADKPADTEFSLDLDLSEPATPAAETAFEFGDDFAVEEKDSLDLDIDSFDFDLDAADETQKASTDDEFSLDDLALELADSEAAEAPSFDLSEEFSLPEQDKSETTAFGQQIDEVSAELEALSESLDTDGLADDTLIDPRHSQFDLDDLGDLGDLDDFEDKPAEQAKVAAPTPSSEDDLKLTDLEIEDLGDVEDDFSFLSGTDETATKLDLARAYIDMGDAEGARDILDEVVVEGTAAQQDEARELISQLG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

507460 : 576127

Burkholderia_phage(11.76%)

transposase,integrase,tRNA

attL 507908:507923|attR 581796:581811

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151183772.1\|507460_507952_+\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	7.0e-05	31.9
507908:507923	attL	NA	NA	NA	NA
WP_151183773.1\|507938_509414_-	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA
WP_151183774.1\|509600_513497_+	phosphoribosylformylglycinamidine synthase	A9YX36	Burkholderia_phage	2.6e-118	56.5
WP_151183775.1\|514903_515401_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_151183776.1\|515603_516206_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_151183777.1\|516229_516769_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_151183778.1\|516746_516956_+	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_151183779.1\|516972_518154_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_151183780.1\|518180_519434_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_151183781.1\|519446_520247_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_151183782.1\|520434_520962_+	metal-binding protein	NA	NA	NA	NA
WP_151183783.1\|520974_521157_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_151183784.1\|521160_522174_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_151183785.1\|522294_523233_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_151183786.1\|523246_523990_+	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-17	33.7
WP_151183787.1\|524204_524441_+	acyl carrier protein	A0A1S5R3K8	Pseudomonas_phage	6.7e-06	42.9
WP_151183788.1\|524541_525783_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_151183789.1\|525785_526619_+	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_151183790.1\|526603_527650_+	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_151183791.1\|527659_528295_+	dTMP kinase	M1PSC7	Streptococcus_phage	6.0e-41	49.7
WP_151183792.1\|528284_529268_+	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_151183793.1\|529775_530561_+	TatD family deoxyribonuclease	NA	NA	NA	NA
WP_151183794.1\|530649_531609_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_151183795.1\|531605_532349_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA
WP_151183796.1\|532414_533311_-	DNA-3-methyladenine glycosylase 2	NA	NA	NA	NA
WP_151183797.1\|533615_534548_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_151183798.1\|534920_535868_+	23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF	NA	NA	NA	NA
WP_151183799.1\|536012_536933_-	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	9.1e-107	63.7
WP_151183800.1\|537992_540428_+	DEAD/DEAH box helicase	A0A2I5ARD8	Synechococcus_phage	1.8e-08	27.6
WP_151183801.1\|540509_541985_+	N-6 DNA methylase	J7I0U9	Acinetobacter_phage	9.7e-34	32.1
WP_151183802.1\|541987_543745_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_151185978.1\|543908_544214_+	hypothetical protein	NA	NA	NA	NA
WP_151183803.1\|544365_544887_+	hypothetical protein	NA	NA	NA	NA
WP_151183804.1\|545006_548129_+	DEAD/DEAH box helicase	A0A2H4J643	uncultured_Caudovirales_phage	3.6e-38	24.1
WP_151183805.1\|548135_549845_+	hypothetical protein	NA	NA	NA	NA
WP_151183806.1\|549920_550466_+	hypothetical protein	NA	NA	NA	NA
WP_151183807.1\|550462_550804_+	hypothetical protein	NA	NA	NA	NA
WP_151183808.1\|550793_551555_+	hypothetical protein	NA	NA	NA	NA
WP_151183809.1\|551617_551986_+	hypothetical protein	NA	NA	NA	NA
WP_151183810.1\|552081_553713_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_151183811.1\|553811_554027_-	transcriptional regulator	NA	NA	NA	NA
WP_151183812.1\|554160_554418_-	helix-turn-helix transcriptional regulator	A0A0E3U244	Fusobacterium_phage	6.2e-05	35.5
WP_151183813.1\|554520_554769_+	hypothetical protein	NA	NA	NA	NA
WP_151183814.1\|554772_555939_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	2.5e-45	31.5
WP_151183815.1\|555886_556795_+	HD domain-containing protein	NA	NA	NA	NA
WP_151183816.1\|556871_557123_-	hypothetical protein	NA	NA	NA	NA
WP_151183817.1\|557119_560038_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_151183818.1\|560041_562273_-	hypothetical protein	NA	NA	NA	NA
WP_151183819.1\|562262_562955_-	hypothetical protein	NA	NA	NA	NA
WP_151183820.1\|563099_563924_+	hypothetical protein	NA	NA	NA	NA
WP_151185979.1\|564742_565633_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_151183821.1\|566000_567131_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	7.9e-36	29.9
WP_151183822.1\|567745_569023_+	EF-hand domain-containing protein	NA	NA	NA	NA
WP_151183823.1\|569178_569643_+	hypothetical protein	NA	NA	NA	NA
WP_151183824.1\|570238_571648_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYX8	uncultured_Caudovirales_phage	6.8e-53	34.4
WP_151183825.1\|571924_573451_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.1e-79	35.4
WP_151183826.1\|573564_573921_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.9e-22	47.6
WP_151183827.1\|573917_574229_-	hypothetical protein	NA	NA	NA	NA
WP_151183828.1\|574303_574867_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.5e-14	36.1
WP_151183574.1\|575149_576127_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.5e-103	60.9
581796:581811	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1253298 : 1261100

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151184365.1\|1253298_1254129_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.8e-11	24.7
WP_151184366.1\|1254115_1254907_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.7e-22	37.3
WP_151184367.1\|1255080_1255605_+	copper chaperone PCu(A)C	NA	NA	NA	NA
WP_151184368.1\|1255695_1257051_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.5e-49	29.4
WP_151184369.1\|1257094_1257928_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.1e-61	45.5
WP_151184370.1\|1258070_1258739_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	2.0e-79	73.1
WP_151184371.1\|1259216_1261100_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.0e-19	38.0

DBSCAN-SWA_3

1506179 : 1585732

Mycobacterium_phage(21.05%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151183349.1\|1506179_1507127_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	4.4e-88	53.5
WP_151184573.1\|1507794_1509246_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.5e-31	29.1
WP_151184574.1\|1509373_1511566_-	AAA family ATPase	NA	NA	NA	NA
WP_151184575.1\|1511569_1518043_-	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.5e-59	22.5
WP_151184576.1\|1518190_1518622_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_151184577.1\|1518784_1520101_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_151184578.1\|1520094_1520424_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_151184579.1\|1520772_1521843_+	hypothetical protein	NA	NA	NA	NA
WP_151184580.1\|1521964_1522216_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_151184581.1\|1522205_1523444_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_151184582.1\|1523603_1524935_+	HipA domain-containing protein	NA	NA	NA	NA
WP_151186029.1\|1524934_1525201_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_151184583.1\|1525358_1526513_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_151184584.1\|1526509_1527013_+	DUF4411 family protein	NA	NA	NA	NA
WP_151184585.1\|1527409_1530484_-	DEAD/DEAH box helicase	K4GGH7	Bombyx_mori_nuclear_polyhedrosis_virus	1.2e-25	25.0
WP_151184586.1\|1530514_1531462_-	hypothetical protein	NA	NA	NA	NA
WP_151184202.1\|1531492_1532746_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	3.9e-92	46.0
WP_151184587.1\|1532787_1533438_-	hypothetical protein	NA	NA	NA	NA
WP_151184588.1\|1533424_1534174_-	OmpA family protein	NA	NA	NA	NA
WP_151184589.1\|1534166_1536167_-	anti-phage defense ZorAB system ZorA	NA	NA	NA	NA
WP_151184590.1\|1536219_1536897_-	hypothetical protein	NA	NA	NA	NA
WP_151184591.1\|1536896_1542095_-	class I SAM-dependent DNA methyltransferase	A0A1B1IUC6	uncultured_Mediterranean_phage	2.6e-17	23.0
WP_151184592.1\|1542091_1545010_-	DEAD/DEAH box helicase	A0A1B1IUI1	uncultured_Mediterranean_phage	1.6e-43	26.2
WP_151184593.1\|1545925_1547245_+	DNA-binding protein	NA	NA	NA	NA
WP_151184594.1\|1547448_1547802_-	hypothetical protein	NA	NA	NA	NA
WP_151184595.1\|1548189_1548591_-	EAL domain-containing protein	NA	NA	NA	NA
WP_151184202.1\|1548584_1549838_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	3.9e-92	46.0
WP_151184596.1\|1549817_1550423_-	EAL domain-containing protein	NA	NA	NA	NA
WP_151184597.1\|1551220_1552204_+	DUF1852 domain-containing protein	NA	NA	NA	NA
WP_151184598.1\|1552247_1553276_+	methionine synthase	NA	NA	NA	NA
WP_151184202.1\|1553477_1554731_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	3.9e-92	46.0
WP_151184599.1\|1555145_1555796_-	hypothetical protein	NA	NA	NA	NA
WP_151184600.1\|1555897_1556683_+	TSUP family transporter	NA	NA	NA	NA
WP_151186030.1\|1556650_1557460_-	NAD(+) diphosphatase	NA	NA	NA	NA
WP_151184601.1\|1557502_1559182_-	ferrous iron transporter B	NA	NA	NA	NA
WP_151184602.1\|1559362_1560175_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_151184603.1\|1560468_1561182_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	1.5e-40	40.6
WP_151184604.1\|1561178_1561619_-	ribonuclease HI	J9Q745	Salmonella_phage	8.9e-36	50.0
WP_151184605.1\|1561608_1562391_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_151184606.1\|1562480_1563263_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_151184607.1\|1563346_1564912_+	LysM peptidoglycan-binding domain-containing protein	Q94ML9	Bacillus_amyloliquefaciens_phage	3.4e-05	31.9
WP_151184608.1\|1565053_1566880_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_151184609.1\|1566879_1568697_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_151184610.1\|1568699_1569788_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA
WP_151184611.1\|1569789_1570809_+	ABC transporter permease	NA	NA	NA	NA
WP_151186031.1\|1570786_1572415_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-16	30.4
WP_151184612.1\|1572447_1573245_+	enoyl-ACP reductase	NA	NA	NA	NA
WP_151184613.1\|1573425_1575438_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	5.0e-25	25.1
WP_151184614.1\|1575687_1577544_-	peptidylprolyl isomerase	NA	NA	NA	NA
WP_151184615.1\|1577726_1578002_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.1e-22	64.0
WP_151184616.1\|1578140_1580543_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.5e-220	51.7
WP_151184617.1\|1580688_1581966_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	9.0e-137	58.2
WP_151184618.1\|1582071_1582713_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	1.7e-56	56.5
WP_151184619.1\|1582834_1584175_-	trigger factor	NA	NA	NA	NA
WP_151184620.1\|1584290_1584632_-	hypothetical protein	NA	NA	NA	NA
WP_151183349.1\|1584784_1585732_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	4.4e-88	53.5

DBSCAN-SWA_4

1592577 : 1596592

uncultured_Caudovirales_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151184625.1\|1592577_1593345_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-11	23.1
WP_151184626.1\|1593347_1594052_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-15	26.7
WP_151184627.1\|1594116_1595088_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	1.7e-116	63.6
WP_151184628.1\|1595200_1595542_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	4.9e-34	66.4
WP_151184629.1\|1595538_1595841_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_151184630.1\|1595840_1596200_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	8.3e-24	50.8
WP_151184631.1\|1596199_1596592_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.3e-43	69.8

DBSCAN-SWA_5

2655759 : 2698044

Burkholderia_phage(33.33%)

transposase,integrase

attL 2650726:2650739|attR 2663181:2663194

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2650726:2650739	attL	NA	NA	NA	NA
WP_151185524.1\|2655759_2656977_+\|integrase	tyrosine-type recombinase/integrase	A0A1W6JPG6	Morganella_phage	4.3e-72	42.8
WP_151185525.1\|2657612_2658581_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	5.3e-57	41.9
WP_151185526.1\|2658626_2659637_+	YqaJ viral recombinase family protein	Q0H280	Geobacillus_phage	6.8e-47	37.7
WP_151185527.1\|2659715_2660615_+	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_151185528.1\|2660680_2661181_+	DNA repair protein RadC	NA	NA	NA	NA
WP_151185529.1\|2661289_2661754_+	hypothetical protein	NA	NA	NA	NA
WP_151185530.1\|2662122_2662776_-	TIGR02646 family protein	NA	NA	NA	NA
WP_151185531.1\|2662778_2664032_-	AAA family ATPase	C7BGE8	Burkholderia_phage	8.8e-12	26.4
2663181:2663194	attR	NA	NA	NA	NA
WP_151186096.1\|2664310_2666083_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_151185532.1\|2666564_2666786_-	hypothetical protein	NA	NA	NA	NA
WP_151185533.1\|2667276_2667912_+	resolvase	NA	NA	NA	NA
WP_151185534.1\|2667982_2668639_-	hypothetical protein	NA	NA	NA	NA
WP_151185535.1\|2668823_2669756_-	hypothetical protein	NA	NA	NA	NA
WP_151185536.1\|2670262_2670469_+	hypothetical protein	NA	NA	NA	NA
WP_151185537.1\|2670636_2671089_+	hypothetical protein	NA	NA	NA	NA
WP_151185538.1\|2671176_2671989_+	hypothetical protein	NA	NA	NA	NA
WP_151185539.1\|2672050_2672602_-	hypothetical protein	NA	NA	NA	NA
WP_151185540.1\|2672667_2672967_-	hypothetical protein	NA	NA	NA	NA
WP_151185541.1\|2672972_2674316_-	2-keto-D-gluconate dehydrogenase	NA	NA	NA	NA
WP_151185542.1\|2674312_2676478_-	AAA domain-containing protein	K4I1H4	Acidithiobacillus_phage	3.3e-46	36.5
WP_151183574.1\|2676613_2677591_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.5e-103	60.9
WP_151185543.1\|2678383_2680042_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_151183574.1\|2680068_2681046_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.5e-103	60.9
WP_151185544.1\|2681190_2681433_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_151185545.1\|2681656_2681902_+\|transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	1.7e-07	37.5
WP_151185546.1\|2682369_2683335_+	DNA-processing protein DprA	NA	NA	NA	NA
WP_151185547.1\|2683401_2683608_+	hypothetical protein	NA	NA	NA	NA
WP_151185548.1\|2684364_2685252_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_151185549.1\|2685953_2686673_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_151186097.1\|2686676_2689808_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	7.0e-74	26.7
WP_151185550.1\|2690048_2690924_-	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	3.5e-39	37.4
WP_151185551.1\|2690920_2691193_-	hypothetical protein	NA	NA	NA	NA
WP_151185552.1\|2691403_2691724_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_151185553.1\|2691720_2691981_-	addiction module antitoxin	NA	NA	NA	NA
WP_151183349.1\|2692317_2693265_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	4.4e-88	53.5
WP_151185554.1\|2693666_2693933_-	hypothetical protein	NA	NA	NA	NA
WP_151185555.1\|2693921_2694053_+	DUF4357 domain-containing protein	NA	NA	NA	NA
WP_151185556.1\|2694235_2696125_-	AAA family ATPase	NA	NA	NA	NA
WP_151185557.1\|2696121_2696637_-	hypothetical protein	NA	NA	NA	NA
WP_151183574.1\|2697066_2698044_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	6.5e-103	60.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043320

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection