CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP032352	Pseudomonas protegens strain pf5-k3 chromosome, complete genome	4 crisprs	csa3,cas3,DinG,DEDDh,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP032352_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032352_1

668159-668276

Orphan

Consensus_repeat	Method
GGGCCCTTTCGCTGGCAAGCCAGCTCCTACGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032352_1

>merge|NZ_CP032352|1|668159-668276|CRISPRCasFinder
GGGCCCTTTCGCTGGCAAGCCAGCTCCTACGGTCGGTGGGGAGCTGCCCATGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTCGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTACGGT

>NZ_CP032352|1|1|668159-668276|CRISPRCasFinder
GGGCCCTTTCGCTGGCAAGCCAGCTCCTACGGT	CGGTGGGGAGCTGCCCATGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTCGC
GGGCCCCTTCGCTGGCAAGCCAGCTCCTACGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032352.1\|WP_011060580.1\|664835_665606_-\|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270248
NZ_CP032352.1\|WP_011060575.1\|670491_670857_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379639
NZ_CP032352.1\|WP_011060579.1\|665777_666554_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP032352.1\|WP_011060571.1\|674784_674958_-\|DUF1427-family-protein	unknown	unknown	gnl\|CDD\|369277
NZ_CP032352.1\|WP_011060577.1\|668319_669414_-\|tRNA-2-selenouridine(34)-synthase-MnmH	unknown	unknown	gnl\|CDD\|236982
NZ_CP032352.1\|WP_011060583.1\|662089_663379_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP032352.1\|WP_148213337.1\|673492_673687_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011060588.1\|657509_658484_-\|porphobilinogen-synthase	unknown	unknown	gnl\|CDD\|172020
NZ_CP032352.1\|WP_011060573.1\|672199_673228_+\|purine-nucleoside-permease	unknown	unknown	gnl\|CDD\|377669
NZ_CP032352.1\|WP_011060581.1\|664118_664775_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP032352.1\|WP_011060582.1\|663375_664122_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP032352.1\|WP_011060585.1\|660482_661187_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|183298
NZ_CP032352.1\|WP_103291512.1\|673583_673772_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011060574.1\|671155_672112_+\|nucleoside-specific-channel-forming-protein-Tsx	unknown	unknown	gnl\|CDD\|237911
NZ_CP032352.1\|WP_011060572.1\|673787_674744_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|223677
NZ_CP032352.1\|WP_011060584.1\|661396_662089_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_041774167.1\|658770_659367_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011060578.1\|667095_668151_+\|permease	unknown	unknown	gnl\|CDD\|223773
NZ_CP032352.1\|WP_148213338.1\|673310_673505_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011060576.1\|669413_670448_-\|selenide,-water-dikinase-SelD	unknown	unknown	gnl\|CDD\|234870

Protein	Function_ID	Function_description	E-value
NZ_CP032352.1\|WP_011060580.1\|664835_665606_-\|amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270248	cd13530, PBP2_peptides_like, Peptide-binding protein and related homologs; type 2 periplasmic binding protein fold. This domain is found in solute binding proteins that serve as initial receptors in the ABC transport, signal transduction and channel gating. The PBP2 proteins share the same architecture as periplasmic binding proteins type 1, but have a different topology. They are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the family includes ionotropic glutamate receptors and unorthodox sensor proteins involved in signal transduction.	4.4234e-59
NZ_CP032352.1\|WP_011060575.1\|670491_670857_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.60113e-21
NZ_CP032352.1\|WP_011060579.1\|665777_666554_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	7.64554e-81
NZ_CP032352.1\|WP_011060571.1\|674784_674958_-\|DUF1427-family-protein	gnl\|CDD\|369277	pfam07235, DUF1427, Protein of unknown function (DUF1427). This family consists of several bacterial proteins of around 100 residues in length. The function of this family is unknown.	5.25406e-22
NZ_CP032352.1\|WP_011060577.1\|668319_669414_-\|tRNA-2-selenouridine(34)-synthase-MnmH	gnl\|CDD\|236982	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional.	0
NZ_CP032352.1\|WP_011060583.1\|662089_663379_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	5.99362e-64
NZ_CP032352.1\|WP_011060588.1\|657509_658484_-\|porphobilinogen-synthase	gnl\|CDD\|172020	PRK13384, PRK13384, porphobilinogen synthase.	0
NZ_CP032352.1\|WP_011060573.1\|672199_673228_+\|purine-nucleoside-permease	gnl\|CDD\|377669	pfam06516, NUP, Purine nucleoside permease (NUP). This family consists of several purine nucleoside permease from both bacteria and fungi.	6.20363e-170
NZ_CP032352.1\|WP_011060581.1\|664118_664775_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	2.17579e-76
NZ_CP032352.1\|WP_011060582.1\|663375_664122_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.19828e-148
NZ_CP032352.1\|WP_011060585.1\|660482_661187_-\|glutathione-S-transferase	gnl\|CDD\|183298	PRK11752, PRK11752, putative S-transferase; Provisional.	1.06511e-64
NZ_CP032352.1\|WP_011060574.1\|671155_672112_+\|nucleoside-specific-channel-forming-protein-Tsx	gnl\|CDD\|237911	PRK15106, PRK15106, nucleoside-specific channel-forming protein Tsx; Provisional.	3.15761e-168
NZ_CP032352.1\|WP_011060572.1\|673787_674744_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|223677	COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only].	1.95141e-61
NZ_CP032352.1\|WP_011060578.1\|667095_668151_+\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.01262e-48
NZ_CP032352.1\|WP_011060576.1\|669413_670448_-\|selenide,-water-dikinase-SelD	gnl\|CDD\|234870	PRK00943, PRK00943, selenide, water dikinase SelD.	0

>NZ_CP032352.1|WP_011060578.1|667095_668151_+|permease
MSNLASTQPNRGWAFWCKPLLFLLVAAIGLYYVKWSPYYLKAFVAADSHSIGASILNDQQSSPWSAALAYSQVYFLAIWKAAVLAVILGSLLQVLIPRDWLLRLFGRAGFSSTLRGGLFALPGMMCSCCAAPVAAGLRRQKVSVGAALAFWIANPVLNPATLVFMGFVLGWGFSALRLVAGIVLVLGVSLVAQRIAGPEQLPEAAVDAVVEASTVNDQPFLSRWGKTLWQLFWSTIPIYVLAVLVLGAARVWLFPHIDGAMGDSLWWLVPLAIAGTLFVIPTAAEIPIVQTMMTLGLGTGPAVALLMTLPSISLPSLLMLRKDFDARVLVTVAVLTMLVGIVCGLIGAVLL
>NZ_CP032352.1|WP_011060579.1|665777_666554_+|IclR-family-transcriptional-regulator
MSDNNNSLFNQSLEKGLAVLRAFNAAQRTMNLAEIATAADINKSSAQRMIHTLEQLGYVRKHPQTKRFQLTPRVMEIGYNYLAADTLVDVANPFLAELAQVTGETTNLTEPDGLDMVYVARFVAPKFIPIHMPIGSRIPMYCTGSGRAYLSALPAAEALQILQASDRKAHTRHTRTDLDEIQREIDATQRRGYALNPEELFLGDMAIAAPILDGKGLPVAAVHVVVPSSRWTLEEAERKLAPSVIECARAIRTSIRTL
>NZ_CP032352.1|WP_011060580.1|664835_665606_-|amino-acid-ABC-transporter-substrate-binding-protein
MHTRTRVLAPAVFAFCCALGLGLSASAQAEPLYKVGATATGIPFTFLDVKSQSIEGMMIDAARAVGKAGGFAVDIQQTTFAALIPSLTSNKIDIISAAMLRTPVREKVVQYSDPVFSYGEGLIVKADDASDYRRMEDLAGETVGAQVGTVFIDELNKRGIFKEVRGYDSIPDLMRDLALGRIKAGFADRPILAYQLAQGTQNKVRLVKGYQPVVMGDVCLIVRKGDAQTLAEVNRGIAVIKADGTLDRIIEHWKLN
>NZ_CP032352.1|WP_011060581.1|664118_664775_-|amino-acid-ABC-transporter-permease
MFLQNALDFLPILLKGAVVTLQVTVGSFVLSSLIGLVFALMMVSKVRSVALFAIGVVNVIRGLPIIVQLFYIYFVLPDFGIQLTAMQAGVIGLGIAYSAYQAENFRAGIQAIHQGQIEAAESIGMRGPMIMRRVVLPQALRIALPPYGNTLVMMLKDSSLVSTITVAEMTRAGQLIASSTFENMTVYTLVALLYLALSLPLSFALRRLEARISTRRKP
>NZ_CP032352.1|WP_011060582.1|663375_664122_-|amino-acid-ABC-transporter-ATP-binding-protein
MIQIKGVHKSFGNVAVLEGIDLQVHSGEVVCLIGPSGSGKSTLLRCINGLESYEQGDILVSGARVDRQAKSIHELRTRVAMVFQRFNLFPHRTALQNVTEGPIYVKKQDPRQARLRAEALLEKVGLAHRMHAYPDELSGGQQQRVAIARALAMDPEAILFDEPTSALDPELVGEVLAVMRKLADEGMTMIVVTHEMGFAQDVADQVCFLHSGRIVEAGPARTVLSTPSHPRTQDFLRRLLNQGAEVQA
>NZ_CP032352.1|WP_011060583.1|662089_663379_-|FAD-binding-oxidoreductase
MSASEPLRMPPSLWAATAMPAEHTPALAEDREVDVAIVGAGYTGLVSALRLAQSGASVCVLDAGEPGWGASGRNGGQVIPGLKFDPEQLLAKFGPVQGEALVDAVGGAADEVFELIKEHGIRCDASRKGWIQPAFSGAAMHTLEQRAEQWRQRGVAVELLDKAAVSQRIGSPQYLGGWVDPRAGSLHPLNYARGLARVAMGLGVSIHGQSRVRKLQRDGGRWTLETDRGARVRASKVLLATNGYTDDLWPGLRQTVIAANSFIIATRPLPAELRQSILPGGEVCSDARRLLLYFKQDAQGRLLLGGRGPFSEPRRDADWNHLERSLLNLFPQLAGVPIEYRWSGRVALTPSFLPQLHEPAPGLSILLGYNGRGIALSTLLGRHLAARLTGAGQGFPFPVTPLRPIPLHGLQRLYLGAGIAWYRLLDALG
>NZ_CP032352.1|WP_011060584.1|661396_662089_+|hypothetical-protein
MKNDRTMNLPRRLARHCKHRRYLPLPALLLGGALCLSLESSASRAQPVDGTQTLVFLRHAEKPAGGLGQLNCQGLNRAIDLASLLPEKFGKAQYVFAANPTRNVEEGELDNSYSYIRPLMTISPSAIKLGLPVNIDFAANDTSDLADELLHDRYHNSIIYTAWSHGYLPELINKVAEEAVGEQQPITEDWASSDFDSLYVLTLTWRNGKASLHSQSYKQGLDGGEQDCPS
>NZ_CP032352.1|WP_011060585.1|660482_661187_-|glutathione-S-transferase
MSDLSAFAVTQKWPAQFPEWIQLYSLPTPNGVKVSIMLEEIGLPYEAHRVSFETQDQMTPEFLSVSPNNKIPAILDPHGPGDQPLALFESGAILIYLADKSGQLLAQESAARYETIQWLMFQMGGIGPMFGQVGFFNKFAGREYEDKRPLERYVNEAKRLLGVLDKHLGGREWIMGERYTIADIATFPWIRNLIGFYEAGELVGIDNFPEVKRVLAKFVARPAVIRGLEIPKVS
>NZ_CP032352.1|WP_041774167.1|658770_659367_-|hypothetical-protein
MSALAPGDFAGTGTHKPARLLCAWAQVVSWKGWMLRAGLLGLLALDPLLCIAQTTAVKQPPGPATLPGNTPGSESAASASVAATPGDNGVAVNATCNLPLKPSAGKVVEIYWTQGPENRRVVGREADHYVDLNLIVRTVGYRPGECIEATIQSENAADEIADRIKKIVLRGKVDDTGMAYFKTPLKDYTLNLQGSEPP
>NZ_CP032352.1|WP_011060588.1|657509_658484_-|porphobilinogen-synthase
MSSQFPEARPRRLRRSEQLRSLFQETEFTLNDLVLPIFVEEEIDDFVPIKSMPGVMRIPESRLAGEIERYARAGIKSVMTFGVSHHLDCDGSDTWKENGLVSRMSRIAKDAVPEMIVMSDTCFCEYTDHGHCGVMHGHEVDNDQTLLNLGKQAVAAARAGADVIAPSAAMDGQVQAIRRALDAAGFTQTPIMAYSTKFASALYGPFREAGGSALKGDRKSYQMNPMNRREAVRESLLDEQEGADSLMVKPAGAYLDIIRDIREASRLPVAAYQVSGEYAMIKFGAQAGAIDEPRVVRETLGSIKRAGADLIFTYFAMDLALAGI
>NZ_CP032352.1|WP_011060577.1|668319_669414_-|tRNA-2-selenouridine(34)-synthase-MnmH
MPLDCTDYREIFLNDRPMMDTRAPIEFTKGAFPGVLNLPLMTDQERQRVGTCYKQQGQQAAIVLGHQLVSGAIKEQRIQAWADFARAHPDGLLYCFRGGLRSQIVQQWLREAGIDYPRVGGGYKAMRTFLLDTTEQALQQCDFVLLGGMTGTGKTQVLGQLDNALDLEGHANHRGSSFGRRATGQPSNIDFENRLAVDLLKKRERGVQSFVLEDENRMIGSCALPLPLYQSMQGLPMVWLEDSLANRVQRILDDYVVNLCAEFVAVHGEQGFALFAERLLESLNKIHKRLGGERHQRLFLLMEAALAEQARSGDVERHRAWIEGLLGEYYDPMYAFQRESKGARIEFSGEHGAVLDYLRQRSPR
>NZ_CP032352.1|WP_011060576.1|669413_670448_-|selenide,-water-dikinase-SelD
MSEPIRLTQYSHGAGCGCKISPQVLEVILAGSGAQNLDPKLWVGNASRDDAAVYAIDEERGVVSTTDFFMPIVDDPFDFGRIAATNAISDIYAMGGDPLMAIAILGWPVNVLAPEIAREVIRGGRAVCDAAGIPLAGGHSIDAPEPIFGLAVTGLVEKRFMKRNDTATAGCLLYLTKPLGIGVLTTAEKKGKLRSADIGLARDWMCTLNKPGSRFGKLEGVTAMTDVTGFGLLGHLVEMADGSGLTAQIHYDRVPRLPGVEYYLDQGCVPGGTLRNYSSYAEKIGRIQELHKRVLCDPQTSGGLLVAVTPQGNAEFLALAAELGLELAPIGELVERQSHAVEVF
>NZ_CP032352.1|WP_011060575.1|670491_670857_-|nuclear-transport-factor-2-family-protein
MELSDHLLMLERQLQQAEVRADRQALEALLADDFLEFGVSGGRWDKAQVLASLPQQVFIERRISEFAVQCLGAELAQVTYLCHNAAAPGRAASSAWRSSLWRCQEGRWQMLFHQGTPRPSA
>NZ_CP032352.1|WP_011060574.1|671155_672112_+|nucleoside-specific-channel-forming-protein-Tsx
MLNPLRRHASCRTLAVSLWLAGVTGLPSAFAQPPAAPADDSAQGESLSADVQPAKQGAYLSDWYNQDLMLIGSKDISFGPRPADDIYLEYEYFGRKGPFELYGYIDLPKILDIGNSHDKGIWDHGSPLFMEHEPRISIDYLAGRSLAIGPFKEWYVAFDWIYDHGSRTANRANTLYSGLGTDIDTHSRVNLSANFYGRYQWENYGASNEYSWDGYRAQLKYIVPIDSFSNGASLTYIGFTNFDFGSDLHKDNPARTANATVATNVLLYSFTHLRFTLVGRYFHNGGNWEDGSVLNFGDGEFRTRSNGWGYYAGVGYQF
>NZ_CP032352.1|WP_011060573.1|672199_673228_+|purine-nucleoside-permease
MRGIQKISWGLGLSALVASGAWASEAPIKPKVVLISMFAPEAQHWIERLELKREIRVPGLAAEYPVIRCNDREVCLLTTGMGQTNAAASTLALALSPKFDLRKSYFLIAGIAGISPQHGTIGTAAWAHYLVEFGTQWEIDSRDAPEGWPTGYLGINTKGPNEKPPLDYKTEVFELNPKLQAKAFALSRNVALSESKESVAWRLKYPKAPANQPPVVTRCDTLAGNTWFSGTRLSERAEVWTRLLTDNKGTYCTTQQEDNSTYEALLRASREGLLDIQRLAVVRAGSDFDRPAPEASEVDNLLKYADQGGFVPALENLYRAGNPLVQDILGNWSAWEKGVPET
>NZ_CP032352.1|WP_148213338.1|673310_673505_-|hypothetical-protein
MFCVGASLLAKGPLRSPSPASRLLRGMRVPCVLCRSQLAGEGALEIAFAGKPAPTGDACAVCPV
>NZ_CP032352.1|WP_148213337.1|673492_673687_-|hypothetical-protein
MFCVGASLLAKRALRSPSPASRLLRGMRALCVLCRSQLAGEGALEIAFAGKPAPTGDACAVCSV
>NZ_CP032352.1|WP_103291512.1|673583_673772_-|hypothetical-protein
MRRSQLAGEGAQRSPSPASRLLRGMRALRVLCRSQLAGEEGPEIAFAGKPAPTGDACAVCPV
>NZ_CP032352.1|WP_011060572.1|673787_674744_-|zinc-binding-alcohol-dehydrogenase-family-protein
MKALQFSATGDLAALHVVDLPTPVPGAGQVLVRIKAAGLNPSDVKNVLGRFPYTTLPRVPGRDFAGVVEQGPAQLLGQEVWGTGKELGFFADGSHAQYVVLSAQGVARKPRHLSFAQAASLGVPYTTAWDALERSGVARDTRLLVIGGGAVASAALALAKVRGARVLAAARRVEQVQALEAQGYPTLHLQQPETLAAQVAEVYAGGAEVIFDTTGFWLPASVPALATFGRIAIIAAPVDGHVQLPALALYRKGGSVVGINSLLYGVEACAAMLEQFGRYFDEGLLPLPEGLVESPLERGLERYAEVNQGRGEKIILIP
>NZ_CP032352.1|WP_011060571.1|674784_674958_-|DUF1427-family-protein
MNYLISLAAGLLVGLLYGALQVRSPAPPAIALVGLLGMLGGEQLWPVGRQLLGSWLS

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Crispr_ID: NZ_CP032352_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032352_2

744048-744181

Orphan

Consensus_repeat	Method
CCTGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTTGCGGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032352_2

>merge|NZ_CP032352|2|744048-744181|CRISPRCasFinder
CCTGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTTGCGGGCCTTTTCGCTGGCAAGCCAGCGCCTACGGTTGGTAGAGACTGTGGCGTGGACCTGTAGGAGCCGGCTTGCCGGCGAAGGCGGTCTTGCGGGCCT

>NZ_CP032352|2|2|744048-744181|CRISPRCasFinder
CCTGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTTGCGGGCCT	TTTCGCTGGCAAGCCAGCGCCTACGGTTGGTAGAGACTGTGGCGTGGA
CCTGTAGGAGCCGGCTTGCCGGCGAAGGCGGTCTTGCGGGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032352.1\|WP_011060506.1\|741738_742530_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|163573
NZ_CP032352.1\|WP_041774154.1\|756643_761206_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|99707
NZ_CP032352.1\|WP_011060501.1\|748489_749674_-\|porin	unknown	unknown	gnl\|CDD\|379292
NZ_CP032352.1\|WP_011060499.1\|751059_751935_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP032352.1\|WP_011060509.1\|738797_739982_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274821
NZ_CP032352.1\|WP_011060505.1\|742762_743305_+\|PQQ-dependent-catabolism-associated-CXXCW-motif-protein	unknown	unknown	gnl\|CDD\|274823
NZ_CP032352.1\|WP_011060511.1\|736571_737210_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP032352.1\|WP_011060510.1\|737209_738481_-\|HAMP-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP032352.1\|WP_011060508.1\|740012_740987_+\|YVTN-family-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|274824
NZ_CP032352.1\|WP_011060504.1\|743359_744025_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP032352.1\|WP_011060496.1\|753506_754217_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226634
NZ_CP032352.1\|WP_011060507.1\|740983_741742_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|274822
NZ_CP032352.1\|WP_011060497.1\|752790_753510_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226670
NZ_CP032352.1\|WP_011060498.1\|751951_752704_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270420
NZ_CP032352.1\|WP_011060513.1\|734462_735122_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP032352.1\|WP_011060503.1\|744214_746866_-\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP032352.1\|WP_011060495.1\|754263_755505_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP032352.1\|WP_011060502.1\|746795_747959_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225825
NZ_CP032352.1\|WP_138641099.1\|755596_756322_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP032352.1\|WP_011060512.1\|736292_736529_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|274227

Protein	Function_ID	Function_description	E-value
NZ_CP032352.1\|WP_011060506.1\|741738_742530_+\|ABC-transporter-permease-subunit	gnl\|CDD\|163573	TIGR03861, ABC_efflux_transporter_permease_protein, alcohol ABC transporter, permease protein. Members of this protein family, part of a larger class of efflux-type ABC transport permease proteins, are found exclusively in genomic contexts with pyrroloquinoline-quinone (PQQ) biosynthesis enzymes and/or PQQ-dependent alcohol dehydrogenases, such as the phenylethanol dehydrogenase PedE of Pseudomonas putida U. Members include PedC, an apparent phenylethanol transport protein whose suggested role is efflux to limit intracellular concentrations of toxic metabolites during phenylethanol catalysis. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	8.72476e-138
NZ_CP032352.1\|WP_041774154.1\|756643_761206_-\|ATP-binding-protein	gnl\|CDD\|99707	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.	1.24972e-06
NZ_CP032352.1\|WP_011060501.1\|748489_749674_-\|porin	gnl\|CDD\|379292	pfam13609, Porin_4, Gram-negative porin.	1.04386e-15
NZ_CP032352.1\|WP_011060499.1\|751059_751935_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.73006e-38
NZ_CP032352.1\|WP_011060509.1\|738797_739982_+\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274821	TIGR03863, PQQ_ABC_bind, ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are putative substrate-binding proteins of an ABC transporter family that associates, in gene neighborhood and phylogenomic profile, with pyrroloquinoline-quinone (PQQ)-dependent degradation of certain alcohols, such as 2-phenylethanol in Pseudomonas putida U. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP032352.1\|WP_011060505.1\|742762_743305_+\|PQQ-dependent-catabolism-associated-CXXCW-motif-protein	gnl\|CDD\|274823	TIGR03865, PQQ_CXXCW, PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.	6.13407e-76
NZ_CP032352.1\|WP_011060511.1\|736571_737210_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	3.71782e-62
NZ_CP032352.1\|WP_011060510.1\|737209_738481_-\|HAMP-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.99791e-41
NZ_CP032352.1\|WP_011060508.1\|740012_740987_+\|YVTN-family-beta-propeller-repeat-protein	gnl\|CDD\|274824	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.	0
NZ_CP032352.1\|WP_011060504.1\|743359_744025_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.10011e-61
NZ_CP032352.1\|WP_011060496.1\|753506_754217_+\|ABC-transporter-permease	gnl\|CDD\|226634	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism].	8.54714e-84
NZ_CP032352.1\|WP_011060507.1\|740983_741742_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|274822	TIGR03864, PQQ_ABC_ATP, ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.03019e-126
NZ_CP032352.1\|WP_011060497.1\|752790_753510_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226670	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism].	1.72247e-79
NZ_CP032352.1\|WP_011060498.1\|751951_752704_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270420	cd13702, PBP2_mlr5654_like, Substrate binding domain of ABC-type histidine/lysine/arginine/ornithine transporter-like; the type 2 periplasmic-binding protein fold. This group includes uncharacterized periplasmic substrate-binding protein similar to HisJ and LAO proteins which serve as initial receptors in the ABC transport of histidine-, arginine, and lysine-arginine-ornithine amino acids. This group belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.36044e-112
NZ_CP032352.1\|WP_011060513.1\|734462_735122_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.91629e-29
NZ_CP032352.1\|WP_011060503.1\|744214_746866_-\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.13369e-44
NZ_CP032352.1\|WP_011060495.1\|754263_755505_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	6.68246e-49
NZ_CP032352.1\|WP_011060502.1\|746795_747959_-\|hypothetical-protein	gnl\|CDD\|225825	COG3287, COG3287, Uncharacterized conserved protein [Function unknown].	2.54324e-117
NZ_CP032352.1\|WP_138641099.1\|755596_756322_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.4575e-153
NZ_CP032352.1\|WP_011060512.1\|736292_736529_-\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|274227	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family. This bacterial protein family has a very similar seed alignment to that of pfam03693 but is a more stringent model with higher cutoff scores. Proteins that score above the trusted cutoff to this model almost invariably are found adjacent to a ParE family protein (pfam05016), where ParE is the killing partner of an addiction module for plasmid stabilization. Members of this family, therefore, are putative addiction module antidote proteins. Some are encoded on plasmids or in prophage regions, but others appear chromosomal. A genome may contain several identical copies, such as the four in Magnetococcus sp. MC-1. This family is named for one member, CC2985 of Caulobacter crescentus CB15. [Cellular processes, Other, Mobile and extrachromosomal element functions, Plasmid functions].	7.70078e-13

>NZ_CP032352.1|WP_011060504.1|743359_744025_+|response-regulator-transcription-factor
MYKILIADDHPLFREAIHNVISDGFPGSEVMETADLDSALALTQEHDDLDLILLDLNMPGMHGLNGLITLRNEAPTIPVVIVSAEQDKQIVLQAITYGAVGFITKSSARSQMTEAIEQILNGNVYLPPDIIRTQKSQPGRRSSETPSFPPELLQALTRKQLLVLERMTKGESNKQIAYTLDIAETTVKAHVSAILRKLNVHNRVQAILSAGDIDFGAYLRR
>NZ_CP032352.1|WP_011060505.1|742762_743305_+|PQQ-dependent-catabolism-associated-CXXCW-motif-protein
MPRALETLAALTLSLALGAAHAAAPLFSAEGYRTSLYRSPTPLQIDQGRIIDTPGLQELLKEQPAPLLIDVYRRQWLQGRFIDSEPHANLPGSHWLANTGDGELSPEWQAYFAGNLQRLSHADPQRALVFYCRADCWLSWNAVKRAAALGYKNIYWYRDGLDAWEAAGLPVEAARPQPFP
>NZ_CP032352.1|WP_011060506.1|741738_742530_+|ABC-transporter-permease-subunit
MNAYWQCLRGIVLREWLRFVLQRTRFLSALVRPLLWLLVFAAGFRAALGIAIIEPYSTYIPYEVYIVPGLACMILLFNGMQGSLSMVYDREMGSMRVLLTSPLPRAFLLASKLLATSLISLLQVYAFLAVAWLYGVQPPAMGLLAALPALLLVALMLSALGLLLSNAIRQLENFAGVMNFVIFPLFFLSSALYPLWKMLEASPWLYWLCTLNPFTHAVELVRFALYQRLNLLALAVCLGLTLVFSLLAVLTFNPQHAALRKST
>NZ_CP032352.1|WP_011060507.1|740983_741742_+|ATP-binding-cassette-domain-containing-protein
MNALEVSQLSFAYGPRQALDQVSLSLAPGRFAALLGPNGAGKSTLIALLTRLYDLQQGDIRVGGCSLRNAARAALRQLGVVFQQSTLDLDLSVEQNLHYHAALHGLSRRQGQARIDAELARQGLSERRRDSVRALNGGHRRRVEIARALLHEPRLLLLDEASAGLDPASRLALNRHIRQLCQERRLSVLWTTHLLDEVQADDQLLILHQGRLVASGVAGTISQEQGGDLGTAFARLTQNPQPHPAPIGEPLA
>NZ_CP032352.1|WP_011060508.1|740012_740987_+|YVTN-family-beta-propeller-repeat-protein
MRRPLLCRSALCAGLLLAAGHAMAATAWVSNEKDNSLSLIDLQTLEVTQTLPVGQRPRGLLLSHDNKLLYICASDSDRVQVMDVATRKIIKELPSGKDPEQFALHPNNRWLYVSNEDDALVTVIDTETAKVLGQINVGVEPEGMAVSPDGKWAVNTSETTNMLHWIDTSTQTLADSTLVDQRPRFVEFNQDGSRLWASAEIGGTVTILDVATRQVLKTLNFKIKGVHPDKVQPVGIKLSADGKYAFVALGPANHVAVIDAKTYEILDYLLVGRRVWQLAFTPDQSQLLATNGVSGDVSVIDVNSLKVLKSVKVGRYPWGVVVTP
>NZ_CP032352.1|WP_011060509.1|738797_739982_+|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MHQPAPLIPTCLLALASVLLPLAASQAGEEPLQVRIGYLGYRPDPGPLLSNIIPEPADAGLQGAQLAIVDSNSTGRFLKQQFQLDSASVDSPGALLQAAKAQHDQGLRLFVVNAPAASLRELSAALPDSLLFNAGSPDDRLRSSQCLGNVLHSLPGRAMLADALVQFMVLRKWQRALLIVGQTEDDRAYADALRRATQRFGVNIVAEKPWTFDNDQRRSAQADMPLFTQTAEYDVVLVADERGDFGEYLPYQTWYPRPVAGTQGLTPTGWHKSVETFGAAQLQKRFEAQAGRWMNDRDFAAWMAVRSVASAVSKLRQADPRALQTLLLSDQLPLDGFKGRKLSYRPWNGELRQPIPLVQPRALVSTSPQDGFLHPFNEMDSLGYDRPEVTCRYP
>NZ_CP032352.1|WP_011060510.1|737209_738481_-|HAMP-domain-containing-sensor-histidine-kinase
MSALWRINLWVTAFFAVVTLACAALLLHQAVADVERELQSAEAVVEYLSDSAERNPAGLQPHLTQSLRHVRVHWLAPDEAVRMPEQAGLDAWLGRQLFSERRHNARELDLGDGRRVLIAVDARDEIDEVWDSLQQLLSLCGLALLLSLLTIRWAVRRGMGLLDDLLRALQQVSGGQLAVRLREAGLPEARQLAGHFNRMTATLEQTRADNAQLTQALLAVQERERTYLAQTLHDDLGQYLAGIRAQACLLRMVSNQPTVVEQTAQALELNCERLQQGFRALVQDLYPVVLQHLPLAEAFGLLVSQWQDSQGIDCQLRVGADLPALPGASKTHLYRLLQEALTNVARHADASQVRVRLQRSARGLRLLVRDNGCGARQPQRPGVGLHSMAERARSLGGELHILSRPGAGWALALNMPLNMPMEA
>NZ_CP032352.1|WP_011060511.1|736571_737210_-|response-regulator-transcription-factor
MNILLVDDHAVVRQGYASLLRAVLPAMQVREAASGEEALARVAEEVPQLVIMDFGLPGISGLETTRRLRQRLPQLRVLFFSMHDELPLVRQALEAGASGYLTKNSAPQVLIEAVHRVLAGHAYIEQPLATQLACTPAQNASDPRLQSMTQRELEIFVMLAKGTPARVIAEQLCISAKTVSNHLTLLKSKLQVSSHAELVHLGIDMGVVRVAG
>NZ_CP032352.1|WP_011060512.1|736292_736529_-|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MSTMNISLPDALKSFVDDQVSQRGYSTSSEYVRELIRKDQDRQHLRGLLLAGAQSAPGTAVQGDYFESLRARVHKARG
>NZ_CP032352.1|WP_011060513.1|734462_735122_+|pentapeptide-repeat-containing-protein
MNYLPLALLLSLSPALAMNVDDDGNDVPLTINGCLIAESSQCPGANLRGANLANQDLRKMNLAGADLSGADLRHAQLDLANLEKARLQGANLTRASLQQSNLRLADFTDAKLMAIQGWGLFAQGAQFEKADLSAAYLQFARLSGAKLHQAKLRAADLEMAWLSKADLQGADLSDANLQEAKFGESNLERADLRGARQHYGNFQDANMEGCQGCPGTWDK
>NZ_CP032352.1|WP_011060503.1|744214_746866_-|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator
MACTSTRPSPGSPLPVVELRPAAELQAQLDCLQRENRKLRRINSALIERVESGITRGNDPYAAFQHSVVLAEQVRERTDALNQAMAELKAGNHLLSEARLRAETAHQHLIDAIESISDAFVLFDQEQRIVLFNSRFRAFWSHSRVRIMAGMRLSEVRRLLTSTGLFSEEPRSGGDEQLLYRLHNGRWLQVSERPTREGGRVILFTDITEVKHSETLRREQAVAQKSHLLQRAVDNLSQGVAMVSAEGVLELWNRRFLELSGLAPVAAHRLFAEVIGDSELRLLSPDSRDANGRPIHECEQRLSDGRVLEIRTHPLPTGGFVNTFTDITERYQHAEALSESERWIRLITDHVPALIAYLNADLVYEFTNKVYEEWYCWPRGVMLGQSLREVHSEQHYQRLESYVERALAGESVTFEFAETNINNQERYMLRSYVPNRLANGEVVGIFVLIRDITERRRTAEALHQAYQNLELRVRERTAELTTLNQQLLREIEERSRVESRLREAKAEAERANLSKTKFLAAVSHDLLQPLNAARLFTSALLERRDPQASSALVRNVSNSLEDVENLLGTLVDISKLDAGVIKADIAPFALSELLENLAAEYAQVARSEGLELHFVACSALVRSDIQLLARILRNLLSNAIRYTRQGRVVLGCRRQGRWLSIQVWDSGMGIAAERLEEIFQEFKRGEEQRPDQDRGLGLGLAIVEKIAGILGHRIGVRSWPGRGSVFSVQVPISASAPLPAPRPELGDALLERLQGARIWVLDNDAAICAGMRTLLEGWGCQVITALSEEDLARQVDDYRAEADLLIADYHLDQQQNGIDAVARINARRALAIPAMMITANYSNELKQQLRELGHTLMHKPVRPMKLKTAISHLLSPATPTPHH
>NZ_CP032352.1|WP_011060502.1|746795_747959_-|hypothetical-protein
MQQAQSEGVVSAMSQAVDPQQVAQDLASQLLHPHLGFVLFFCSAEYPLQTLGPALQQSFGGIPLVGCTSAGEITPLGYGRNCVTAIGFDHRHFSIAAELIDQMEHFSLIDAQQMVERLVGRCRSNTLAPIKGNSFALTLLDGLSSREEMVLAALSAALGDIPHFGGSAGDDNYLTHTHVYYGGEFHSGAAVVVLVNTWLDFEVFTTHHIQPREEKLVVTGADSTLRRVYELNAEPAAEEYARLIGVPLAQLDHRVFAAHPLAVRINQHYYVRAVQQVHPDLSLSFYCAVENGIVLTAMTPGPLLPNLQQLFDGLQQRLGGLLLTIGCDCFLRRLELEGQGSLEQIGAFLREQRVMGFNTYGEQFNGMHINQTFTGVAIARSRTPARR
>NZ_CP032352.1|WP_011060501.1|748489_749674_-|porin
MHNNKNCQYPLIPALLVGLSTLGLGSVAEAEIMLYDKDQTTFSTDGYINAFYVNSKVDRAGDQYDRRQARVKMGFLPNYLGFNMGKQVDDLKLGARASFWVTINDSETNGTDTAIDVRQFYGTVANPEWGEVLIGKDFGLFARSNILLDEMLAGYGQVSDSLGLVDGGGVSFGNIGSGYPYPFPSSQITYRSPVMDGLRVAVGILDPVDTNDSSALGKAYQKNPRTESEVTYQFDLGGAKFYSWLNGSYQTSDNTDPNVQSVTSKGLGYGLQAKMGGLSLTGSGFQAKGINPFFTNNAGEATLRNVDSKGYLLQGSYKVGKNRLALSYGKTRDDGNGVVGSGADYQTRGVALFHDINDNLKLVAEYNQFEIDGHHTNAQNENTDTFAVGAVLTW
>NZ_CP032352.1|WP_011060499.1|751059_751935_+|MurR/RpiR-family-transcriptional-regulator
MSQPIKQRLESSLSSATASGRAIASYMLANLYELPFQTAADIAEKLGVSESSVGRFCRAIGYSHFKDLKNDLKNDLGEGPWLVGDRLQEFRQQPNPAAQGLPRSFELEVGALVKVYEYSLTPAWQTVVQRLASRRRVYVAGFQTERGIAASMVHLLQYLRDGVHLVDGAAGHFADVLLSPAEDCALVVFEARRYSRHALTLCHKAREAGIPVTLVTDTFCDWAEQNADEVFRVPTEFNLFWESTAAMLSLVHLLVNEVCKHLGPEVEKRLEATAALHNEFVGYTSSARPKQ
>NZ_CP032352.1|WP_011060498.1|751951_752704_+|transporter-substrate-binding-domain-containing-protein
MNNVLRFAGACALVIAASTAQAETLKIATEGAYPPFNYVDSNNQLHGFDVDIANALCKQMKVECQIVAQDWEGIIPALLAKKYDAVVASMIATDERKKKIAFSNHYYRTPLSVAVAKDSDITDAQTNFKGRTVGAQASSTQAIYAEDHYGPAGADVKFYPTLDEANSDLAAGRVDGVIADKFPLLAWAESTGKDCCKIIGDVNGTTADASIAVRKEDNALRERLNKALDEIVADGTYKQISSRYFAFDIY
>NZ_CP032352.1|WP_011060497.1|752790_753510_+|ABC-transporter-permease-subunit
MFEQLSLLSFASGGWGSALLAGALVTIALALACVPIGLPLGLAVALAARSKNRWARAWATTFSTVFRGLPELLTLLIIYYGCQIAAQKILGALGYPGEVAINTFVAAMIAFSLVFAAFSSEIWLAAFKTLPKGQYEAARALSLSRRTTFNRVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNLAVSVTKEPMLFYSVACFGYLFFSALSGHLFSFLERRFNRAQRSLQP
>NZ_CP032352.1|WP_011060496.1|753506_754217_+|ABC-transporter-permease
MNLDDLLNLFLNQELLERYGPRFIDGLLVTAKLVAISFSLGAVLGLLIALGRLSSNRFLRRFTGAYVYFFRGSPLLAQLFMLYYGLGSFKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEILRGSLLAVAQGQREACKALSLSRWTAFRKVILPQSLLIAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRSFDFQIYLWAAVLYLLIVEVVRRSLKYLEGRLGRHLN
>NZ_CP032352.1|WP_011060495.1|754263_755505_+|FAD-binding-oxidoreductase
MHCQTLVLGAGIVGVSSALHLQARGRQVVLLDRQPPGNGTSHGNAGLIERASVIPYAFPREVTKLVRYGLNQQSDVRYSLRHLPKAGPWLLQYWRHSSAKGLAAATRAMLPLIERCVSEHLALARPANMLQLIADGGWLEAFNDPQAFDFAQRAAADLRDYQLNYRVLDRTALLALEPGLHQDVVGGLHWLDPKTVSDPGGLTRGYAELFKQRGGQFVIGDALSLTQIEGGWQVHSELGPITAQEVVVALGPQASGIFEPLGYRIPLAIKRGYHMHYAALPGTRLQHPILDPVGGYVLAPMVGGIRLTTGIEFADCDDPINEIQLRRCEALARNFYPLGERLDAEPWLGRRPCLPDMCPVIGPAPRHPGLWFNFGHAHHGLTLGPVSGHLLAQMVTGETPFTDPTPYRAERFN
>NZ_CP032352.1|WP_138641099.1|755596_756322_+|ATP-binding-cassette-domain-containing-protein
MIDIAGLNKFYGAFHVLHDIDLKVRQGERIVLCGPSGSGKSTLIRCINRLEIAEKGRILVDRTDLSQNTREAAQVRSQVGMVFQHFNLFPHMSVLDNCTLAPMTVRGLSRKKAEELARGFLAKVGIENQANKYPSQLSGGQQQRVAIARALCMEPKIMLFDEPTSALDPEMVCEVLDVMVKLADSGMTMLCVTHEMCFARQVAGRVLFLDGGRIVEDAPPEEFFGAPKSERAKAFLAQIMH
>NZ_CP032352.1|WP_041774154.1|756643_761206_-|ATP-binding-protein
MSLAGIRSNRGDSYQTLIAMRWAMTILSDAEYQWLEIDSTRWLVDDVVVGKVDGSIICCQCKKNQPDFRPWTISDLSSEFDKSSLLLAREANAEVHFYSRGTFGLVAKLREHCATQPDQECYRESLTVEHTTTDTSLSNTFNAAVSLTTYEFLRRTTFHNTEDFSDLEASLLERLSLLSTNAQAAYVALWHHLDQLGSRMASYGSKAASVQHRLTRADLVVVLTQSGSMLAPHMDESEIRASLNGVSAVGRSWRREIGGKRLQNRVVEDLLSAIYSRKRSILLTGMPGSGKTCTLLAVQEALELRAKRDSALVPMFIQSREFADLATARDREAQGLCEDWVERVARLADKAHVVIVVDSLDVLSISREHTALKYFLAQIDRLLLIENVTVLTACRDFDRRYDRRLAAMVWDCELACQPLDLDCEVLPLLQSLGIDTAGVDGPTRALIQNHRELAVFIELAQLEGGFSVVTSQGLAQRYLDTLVRADTRLGDAAVQAIESVADEMLSTRSLTIPAQRFGGSQSVLRVLLSHNVLHQALDGRVGFGHQTLLDVLVISSAIRRGMTLNSFIQSLSPAPFVRPSIRSFVAQLAIGDRRVFRAQLRAVLMGGSPFHVRRLVAESLADRLPHDDDWPLLRDLRRDCSDVFQVIYLQGKALEWGQFWFKYLVPVLREERDQEALMMLMHQCSVWANEAPSLVFPFWTELLEADWMDRERVASRLGYLLSEIAPAHANLVGKLVESLLSLPLQEHSCLGQSVARCIDAGVLSDEVLWMFVTGRVTDDDVLDLHNLGEKLRLQDYEFGDQCKNYLAERLKVSTELLNLAVQSIEDWSQLRISDIGEWAAGSSGFLRSTSYSVIRTKDDGQHGDADDLLLSAIEAAVINHASLDSKWWRNNRERLCFNHEGALRYFGILSCKAAPSCNVDLSVRLLCEKSLDGSEFGYELGCLAKVAFVHFDSKQQSSVMAAVFAITECDDQDEREILRRQSVQARFVACIPCHMRPPNAQLLLEDVEVREGIFIEAPPIQGWSGIVSAPFPFSVFLETSNHGVLRLLKYYTGYERSFEEGLIGGESEVASMLREAASRDPDRFLGIMSKSWPDISPVFRDAIMSGAAYCLAYLHGNLKSENSWAPLVSVDGAALAGVVIKELSNHSEYWRQNRVASNALNACSHVIANIDQVHRHVDLSAEFLEMQEGASISGDGVSHLEVGLNMARGHIAEALVILVTNLTKSGVPLPEALLRLLRNFADEENPAVRAVIIRRLPYLQSLDPSVGWDLFDRCMKGRSSGLWGTAEPCLYYTYYKDFERVSKWLGRLRFEGIGKDLETWGRISALAALPDHTRTSELLIDLTAIDEVAAWHGASAVWTNTQNFNRHRSQCIAGLEYGLSVVGHADAVVQRMNQLFHRGVTGVPSDLVRSYFTVREASSNSTNSQIYGLDKWLSATAQRDPAEALTVFELYLEYMREKSAYMYDHGGNFTQLLTRLFAEAEEWEETDGGVMLQRVVSVQDELLSLGVSGVSDWLVAAERP

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Crispr_ID: NZ_CP032352_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032352_3

2501899-2501970

Orphan

Consensus_repeat	Method
TTCGCTGGCAAGCCAGCTCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032352_3

>merge|NZ_CP032352|3|2501899-2501970|CRISPRCasFinder
TTCGCTGGCAAGCCAGCTCCTGCAAGACTGAGGTGATCTTTGGGCCGCCTTCGCTGGCAAGCCAGTTCCTGC

>NZ_CP032352|3|3|2501899-2501970|CRISPRCasFinder
TTCGCTGGCAAGCCAGCTCCTGC	AAGACTGAGGTGATCTTTGGGCCGCC
TTCGCTGGCAAGCCAGTTCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032352.1\|WP_011058978.1\|2498522_2499155_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|236881
NZ_CP032352.1\|WP_011058974.1\|2501269_2501842_+\|HupE/UreJ-family-protein	unknown	unknown	gnl\|CDD\|368209
NZ_CP032352.1\|WP_011058982.1\|2493806_2494718_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP032352.1\|WP_011058973.1\|2502059_2503199_+\|N-acylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|225493
NZ_CP032352.1\|WP_011058980.1\|2495425_2497501_-\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP032352.1\|WP_011058972.1\|2503272_2504178_-\|cation-diffusion-facilitator-family-transporter	unknown	unknown	gnl\|CDD\|226474
NZ_CP032352.1\|WP_011058983.1\|2493030_2493669_-\|FMN-dependent-NADH-azoreductase-1	unknown	unknown	gnl\|CDD\|224103
NZ_CP032352.1\|WP_011058964.1\|2512918_2514409_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143448
NZ_CP032352.1\|WP_011058977.1\|2499435_2499936_+\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP032352.1\|WP_011058979.1\|2497886_2498354_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011058976.1\|2499932_2500607_+\|urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900
NZ_CP032352.1\|WP_011058968.1\|2507646_2508942_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	unknown	unknown	gnl\|CDD\|236896
NZ_CP032352.1\|WP_011058965.1\|2511521_2512805_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP032352.1\|WP_011058975.1\|2500616_2501231_+\|urease-accessory-protein-UreG	unknown	unknown	gnl\|CDD\|349776
NZ_CP032352.1\|WP_011058981.1\|2494828_2495359_+\|bacterioferritin	unknown	unknown	gnl\|CDD\|225104
NZ_CP032352.1\|WP_011058971.1\|2504425_2505193_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187604
NZ_CP032352.1\|WP_011058963.1\|2514579_2515482_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP032352.1\|WP_011058967.1\|2508944_2509859_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182689
NZ_CP032352.1\|WP_011058970.1\|2506065_2506782_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP032352.1\|WP_011058966.1\|2510020_2511157_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380565

Protein	Function_ID	Function_description	E-value
NZ_CP032352.1\|WP_011058978.1\|2498522_2499155_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|236881	PRK11202, PRK11202, HTH-type transcriptional repressor FabR.	1.12461e-39
NZ_CP032352.1\|WP_011058974.1\|2501269_2501842_+\|HupE/UreJ-family-protein	gnl\|CDD\|368209	pfam04955, HupE_UreJ, HupE / UreJ protein. This family of proteins are hydrogenase / urease accessory proteins. The alignment contains many conserved histidines that are likely to be involved in nickel binding. The members usually have five membrane-spanning regions.	3.78482e-45
NZ_CP032352.1\|WP_011058982.1\|2493806_2494718_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	3.94051e-71
NZ_CP032352.1\|WP_011058973.1\|2502059_2503199_+\|N-acylglucosamine-2-epimerase	gnl\|CDD\|225493	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism].	1.7689e-46
NZ_CP032352.1\|WP_011058980.1\|2495425_2497501_-\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	1.45949e-170
NZ_CP032352.1\|WP_011058972.1\|2503272_2504178_-\|cation-diffusion-facilitator-family-transporter	gnl\|CDD\|226474	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	1.57287e-83
NZ_CP032352.1\|WP_011058983.1\|2493030_2493669_-\|FMN-dependent-NADH-azoreductase-1	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	7.19623e-74
NZ_CP032352.1\|WP_011058977.1\|2499435_2499936_+\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	2.71298e-57
NZ_CP032352.1\|WP_011058964.1\|2512918_2514409_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143448	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.	0
NZ_CP032352.1\|WP_011058976.1\|2499932_2500607_+\|urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	1.47446e-59
NZ_CP032352.1\|WP_011058968.1\|2507646_2508942_-\|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM	gnl\|CDD\|236896	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional.	5.79973e-169
NZ_CP032352.1\|WP_011058965.1\|2511521_2512805_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	5.56412e-69
NZ_CP032352.1\|WP_011058975.1\|2500616_2501231_+\|urease-accessory-protein-UreG	gnl\|CDD\|349776	cd05540, UreG, urease accessory protein UreG. UreG is one of the four accessory proteins of urease. Urease is an enzyme which catalyzes the decomposition of urea to form ammonia and carbon dioxide. Bacterial urease is a trimer of three subunits which are encoded by genes ureA, ureB, and ureC. Up to four accessory proteins (ureD, ureE, ureF, and ureG) are required for urease catalytical function. UreG may play an important role in nickel incorporation of the urease metallocenter. UreG is a member of the Fer4_NifH superfamily which contains an ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	2.47749e-127
NZ_CP032352.1\|WP_011058981.1\|2494828_2495359_+\|bacterioferritin	gnl\|CDD\|225104	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism].	7.38052e-39
NZ_CP032352.1\|WP_011058971.1\|2504425_2505193_-\|SDR-family-oxidoreductase	gnl\|CDD\|187604	cd05346, SDR_c5, classical (c) SDR, subgroup 5. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	9.84398e-146
NZ_CP032352.1\|WP_011058963.1\|2514579_2515482_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	1.88992e-82
NZ_CP032352.1\|WP_011058967.1\|2508944_2509859_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|182689	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH.	4.84111e-103
NZ_CP032352.1\|WP_011058970.1\|2506065_2506782_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.9756e-134
NZ_CP032352.1\|WP_011058966.1\|2510020_2511157_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380565	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine). This subgroup includes the type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems that are involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine). This subgroup also includes a leucine-specific binding protein (or LivK), which is very similar in sequence and structure to leucine-isoleucine-valine binding protein (LIVBP). ABC-type active transport systems are transmembrane proteins that function in the transport of diverse sets of substrates across extra- and intracellular membranes, including carbohydrates, amino acids, inorganic ions, dipeptides and oligopeptides, metabolic products, lipids and sterols, and heme, to name a few.	2.98883e-139

>NZ_CP032352.1|WP_011058974.1|2501269_2501842_+|HupE/UreJ-family-protein
MTLKRILGALALLLTPALAFAHPGHGDNGLMAGISHPISGLDHLLAMLAVGLWAAQQQGAARWALPCTFVGTMLIGGVLGFEGLELPALESGIAASVLALGLAVALAVRPPLSLAIAATALFALFHGVAHGLELPDMSSPWAYAMGFVAATAALHAAGYAVVRALPQAAAPLVRLAGAASAATGVWLLAG
>NZ_CP032352.1|WP_011058975.1|2500616_2501231_+|urease-accessory-protein-UreG
MNAQPLRVGIGGPVGSGKTALTLALCLALRERYNLAVVTNDIYTREDADFLVRNEALAPERIIGVETGGCPHTAIREDASINLEAVDQLNRRFPGLDLILVESGGDNLSATFSPELSDLTIYVIDVSAGDKLPRKGGPGICKSDLLVINKIDLAPLVGASLEMMNSDTQRMRGGKPFVFSNQKTGQGLADIIAFIERQGLLTAA
>NZ_CP032352.1|WP_011058976.1|2499932_2500607_+|urease-accessory-protein-UreF
MNPAWALLRLASPQLPIGGYSYSQGLEMAVEQQRVNDQASARRWISDQLLLNLARFEAPLLLAHCQAAADQDWARLQQLSEEHRASRETRELYQESRQMGYSLKQLLEGLPELDSDARELLTHQDEPHLALGWALAARAWGISPADALAAWLWSWLENQLAVLMKTLPLGQQAAQRLTSELLPLLQQAQHHAANLDPNHHGSAAFGLSLASMAHERQYSRLFRS
>NZ_CP032352.1|WP_011058977.1|2499435_2499936_+|urease-accessory-protein-UreE
MLVIHRRTTPQATWSAELHLTYEARSKSRLRCFSAAGEDVGLFLERGQPPLHDGEFLEAEDGRIVKVCARPEALLHVTCRNAFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLEQLGASTAPLEAPFQPEHGAYGGGHHHSRHGDEDFNYPPRLHQFGVRP
>NZ_CP032352.1|WP_011058978.1|2498522_2499155_+|TetR-family-transcriptional-regulator
MLPRAEQKQQTRNALMDAARHLMECGRGFGSLSLREVAKAAGIVPTGFYRHFSDMDQLGLELVSEVGQTFRETIRLVRHNEFVMGGIIDASVRIFLDVVEAKRSQFLFLAREQYGGSLPVRQAIATLRENISSDLAADLTLMPKLQHLDAADLSVMADLIVKSVFATLPDIIDPPAQALPEHLTPQAKITQQLRFIFIGLKHWQGLGSTE
>NZ_CP032352.1|WP_011058979.1|2497886_2498354_+|hypothetical-protein
MKRQLLLSLALSVLAANAFALPAAEQATPQVKASHSVFTQTLAEGGSDRLIERNKVAADGYDRTPQGQSVAEDGYDRTPQGQNVAEDGYDRTPQGQNVAEDGYDRTPQGQNVAEGGRDRLEEKGLVEDGYSRTPQGQTVAEGGADRLAERHQAAS
>NZ_CP032352.1|WP_011058980.1|2495425_2497501_-|AsmA-family-protein
MTRTRKILAWSITGLILLLAVLVLVIAFFDWNRIKPTLNAKVSEELHRPFAINGDLSVVWQREPDEGGWRAWVPWPHVVAEDLTLGNPDWSKAPQMVSLKRVELRISPLALLAQRVSIPRIDLTEPDAALQRLADGRANWTFKFDPKDPNAEPSNWTVDIGAIGFDKGHVTLDDQSLKTQLDLQVELLGKPIPFSDIVGESEAKKVAEKGAEAQAYAFALKVKGQYHGQKLAGTGKIGGLLALQDSRKPFPLQAQAQIGDTKVELRGSLTDPLNLGALDLRLKLAGTSLGNLYPLTGVTLPDSPPYSTDGHLTAKLHDPAGATFSYQDFNGKIGDSDIHGNLTYVASQPRPKLSGALVSNQLLMSDLAPLIGADSNAKQKARGGESKQPADKVLPVEEFRTERWRDMDADVEFTGKRIVHSAELPFTDLYTHLVLDDGQLSLEPLRFGVAGGKLDAQIRLNGHTTPLEGRARLTARNFKLKQLFPTFEPMKTSFGELNGDADIAGRGNSVAALLGSANGDLKMLINDGAISRSLMEIAGLNVGNYVVGKMFGDKEVKINCAAADFGIKSGLATSRLFVFDTENAIIYIDGTANMASEQLDLTITPESKGLRLFSLRSPLYVQGKFIQPSAGVKAVPLVLRGAGMVALGVIAGPAAGLLALVAPSGDEPNQCAPLLQQMRSGKAPVTVKPTH
>NZ_CP032352.1|WP_011058981.1|2494828_2495359_+|bacterioferritin
MNDMHLSDVNTLRERARQHVENGAVTEGYNADREEILRLLNESLATELVCVLRYKRHYFMANGIKASVAASEFLEHATQEAEHADKLAERIVQLGGEPEFNPDLLSKHSHAQYVAGNTLKEMVYEDLVAERIAVDSYREIIQYIGDKDPTTRRLFEEILAQEEEHADDMADILNDL
>NZ_CP032352.1|WP_011058982.1|2493806_2494718_+|LysR-family-transcriptional-regulator
MFAHLPLTALRTFESAARLLSFKAAAEDLSVTPTAVSHQIRSLEHWLGVALFERLPRQVRLTEPGQRLFHSLHGALLEVTQSVDTLRPTPSNAQLTVSTTAAFAALWLVPRLGRFYARHPGISLRLDTQCEVVDLQQDASIDVAIRYSQEGYLDLHGLCLFDERFAVYGSPQQVALARQQAPTLISVHWRNSRLYADGWQAWCAQAGESWFDDAPLIRSYDEEQYALQAAIAGQGLVLASDILVSQSVASGLLQPYRPEVQVDGAGYSALCVPGRERHPPVRAFLQWLQQESLLAGHPPLARS
>NZ_CP032352.1|WP_011058983.1|2493030_2493669_-|FMN-dependent-NADH-azoreductase-1
MSTVLAIHGSPRGERSHSRRLADAFLQAWQAANPQGRLTRREVGRGALPHVSEAFIAAAFYPQPEARPLSMQADLALSDELVAELLDHQRLVISAPMHNFSVPSGIKAWVDHIVRLGLTFNTQQDNGVAQYQPLVQGKKVLIVTSRGGGGFGPGGEHEAMNHADRWLRTALGFIGIEDVTVVAAEGEESAPERFAQSCGEAQQRLLALAQSF
>NZ_CP032352.1|WP_011058973.1|2502059_2503199_+|N-acylglucosamine-2-epimerase
MPDVSRSATSPESSALFNAMQQHFHKVIVPLWQGPGWNPQLALPYEALDAEHRPLPPQRYRAMACARQLYLFSQLIGDAAAPFAQERAAALFRSLQRHFHDAEHGGWFYSIDPEGAPLDRRKDLYTHAFILFACAHYWAKVREPLVESVLNAALEVVAQRFARGDGLYEASLAEDWCILGSGPLQNPLMHLAEAFLAILAVREDAAVQAALLELCQAMQQQFIDPQHGVMMEKPLGAVDNWFEPGHQFEWYFLLASSQLLRGSALHACVERAFAFTEQLGVEPESGAVCAMLELPPRAGVKDATQRIWAQAEYLRALTLRPAGQAPLLRQLKALQAHFLHAGGWNECLDANGAVSRRDMPSTTPYHLATCYRGLAEYFA
>NZ_CP032352.1|WP_011058972.1|2503272_2504178_-|cation-diffusion-facilitator-family-transporter
MSNRGEQALLKQSTVLMFAVAIAGIVTGFVSGAQSILFDGFFSLIATFIKVLMLITAKLIAKESNHRFQFGFWHLEPMVLLIEGSFLMLIAIYAFLNGVFGIINGGREVELGLVIFYAAFFAVAEFAYFFYVRRRNRKLKSSLIQFDNISWLVDAMLSVGLLVSFIIALLLKQYGHGQWAVYVDPAILILLALSMLPPALKILRPALRDVLGIAPDQLDEKVRNVMEQAKAAHGFDDYISYVQKHGRARFIEIHIVLPAHYPLQDVATLDRLREEISSQLGEADAARWLTISFTGDRKWIA
>NZ_CP032352.1|WP_011058971.1|2504425_2505193_-|SDR-family-oxidoreductase
MTSTLFITGATSGFGEACARRFAAAGWSLVLTGRREERLNALCAELSKQTEVHGLVLDVRDRKAMEEAIAQLPPSFSKLRGLINNAGLALGVDPAPKCDLDDWDTMVDTNIKGLMYSTRLLLPRLIAHGRGAGIVNLGSIAGNYPYPGSHVYGASKAFVKQFSLNLRCDLQGTGVRVTNIEPGLCESEFSLVRFAGDQARYDATYAGAEPIQPEDIADTIFWVLNTPAHVNINSLELMPVSQTWAGFAIERNAKS
>NZ_CP032352.1|WP_011058970.1|2506065_2506782_-|ABC-transporter-ATP-binding-protein
MTQPILELKDLDVYYGPIQALKKVSLHINEGETVSLIGSNGAGKSTLLMSIFGQPRAESGQILYRGVDITHKSSHYIASNGIAQSPEGRRVFPDMTVEENLLMGTIPIGDKYANEDMQRMFELFPRLKERRTQRAMTMSGGEQQMLAIARALMSRPKLLLLDEPSLGLAPIVVKQIFATLRELAATGMTIFLVEQNANHALKLSDRAYVMVNGEIRLSGTGKELLVNEEVRNAYLGGH
>NZ_CP032352.1|WP_011058968.1|2507646_2508942_-|high-affinity-branched-chain-amino-acid-ABC-transporter-permease-LivM
MSAANKPIDIKKSVIDAVLAGLISLIVFGPIVGVVLDGYSFNLQPTRVAWLVAIVMAGRLALSLFLQTPKGLKILQGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVFPFFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLGFWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLSFTGGPNGMPVPSPTFLGLEFGRKAKDGGVPFHEFFGLEYNPNLKFLFIYIVLFLVVLLVLYIKHRLTRMPVGRAWEALREDEIACRAMGLNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFGILMVLMMIWRPRGLIRISRTGVTPRKGALTEGNAP
>NZ_CP032352.1|WP_011058967.1|2508944_2509859_-|branched-chain-amino-acid-ABC-transporter-permease
MDGIFLQQLINGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESFPLLILGTLIFTVVVTGIYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQISQGAKQQGVPTLLAGAWKVDIGTGFVQLTYTKIFILVAAFAGMALLTYIIKYTKLGRMCRATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLITMNYGTFDFYAGFVIGIKAFTAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVLILIFRPQGLLGRPLVAKV
>NZ_CP032352.1|WP_011058966.1|2510020_2511157_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MSQTFYKKGFLALAVATALGVSAFAQADLKIGVAGPMTGANAAFGEQYMKGAQAAADEINAKGGVNGEKIVLVKGDDACEPKQAVAVANRLVDQDKVAGVVGHFCSSSTIPASEVYSDAGVIAITPGSTNPQVTERGLSAMFRMCGRDDQQGIVAGDYIIDVLKGKKVVVLHDKDTYGQGLADATKAQLTKRGVTPVLYEGLTRGEKDFSAVVTKIRAAGADVVYFGGLHPEAGPLVRQLREQGLKDVKFMSDDGIVTDELVTTAGGPQYVDGVYMTFGADPRLLPDSKAVVDAFRKAGTEPEGYTLYAYASIQALAAGFGGAKSNKGEDAAKWLKANPVKTVMGEKSWDAKGDLKVSDYVVYQWDKDGKYHQLEKQK
>NZ_CP032352.1|WP_011058965.1|2511521_2512805_-|FAD-binding-oxidoreductase
MALQEQCLWETLTPQRPDRAPLKGELTADVCIIGAGFTGLSAAVHLLEQGKRVCVVEAHRAGHGGSGRNVGLVNAGMWIPPDEIEAGFGEQVGSQLNRMLGAAPSLVFSLVDKYHIDCQLRREGTLHMAHNARGEADLRSREEQWKRRGAPVELLTGAACEAATGTRKIAAALLDRRAGTLNPMAYVSGLARAATELGGRLFDHSPVTRLERQGQRWSVQTEQGSVLAEQVVIASNAYTEGDWTELRRNFFPGYYYQVASAPLTEEAARQILPGGQGSWDTRQVLSSIRRDAEGRLLLGSLGNGSQKPLWFLKAWADRVQQHYFPYLKPVEWECTWTGCIAFTPDHLMRLFEPAPGLVAVTGYNGRGVTTGTVVGKAFADYLCNGDPQALPIPFAAMQPLAGVGLRSCLYEAGFSLYHAGQCLRIVI
>NZ_CP032352.1|WP_011058964.1|2512918_2514409_-|aldehyde-dehydrogenase-family-protein
MVAALLDRLGVNPALYQSGTQPVHSPIDGSRIAAVNWQGAAEVEQQVSRAEHAFALWRKVPAPRRGELVRQFGEVLREYKADLGELVSWEAGKITQEGLGEVQEMIDICDFAVGLSRQLYGLTIASERPGHHMRETWHPLGVVGVISAFNFPVAVWAWNTTLALVCGNPVIWKPSEKTPLTALACQALLERVLKNFQDAPEYLSQVIIGGRDAGAALVDDPRVALISATGSTRMGREVAPKVAARFARSILELGGNNAMILGPSADLDMAVRAILFSAVGTAGQRCTTLRRLIAHESVKEEIISRLKTAYSKVRIGHPLEGNLIGPLIDKHSFEAMQDALEQALSEGGRVFGGQRQLQDQFPNAYYVSPAIVEMPEQSEVVCSETFAPILYVIGYNDFEEALRLNNAVPQGLSSCIFTTDVREAEQFMSAVGSDCGIANVNIGPSGAEIGGAFGGEKETGGGRESGSDAWRGYMRRQTNTVNYSRELPLAQGITFD
>NZ_CP032352.1|WP_011058963.1|2514579_2515482_+|LysR-family-transcriptional-regulator
MLNKRYLPSITALQCFEAVTRHLSFTRAAEELNLTQSAVSKQVAQLEELLQHLLFRRVRRRLQLTPAGDLYLVEVRKILTQVEMSTHYLRSYGGETEVLRVSTPYTFGARWLVPRLKGWRLRHPHIHLDLCNEQEPDELLQGHADLAFYFGQGSRPGTESLKLFSEELVAVCAPDSLPAEPLTDPRQLTELVLLQNASRPQGWHEWFDQQGYQTEHSYHGPRFETFYMCIRAAQVGCGVALLPRFLVEEELAEGKLVIAWEYAMPSQDAYYLAYPEHSAEVPKVRDFVRWMLEHNDSPLS

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Crispr_ID: NZ_CP032352_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032352_4

4895623-4895748

Orphan

Consensus_repeat	Method
GTTTTCCACTGAGTTCGGAATCCGAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032352_4

>merge|NZ_CP032352|4|4895623-4895748|CRISPRCasFinder
CGTACTATATGAGTTCGGATTCCGAACTGAGTCCGAACTCGGCTGTTTTCCACTGAGTTCGGAATCCGAACTGAGGGGTAGAGCGGTCTGTTTTCCTGAGTTTTCACTGAGTTCGGAATCCGAACT

>NZ_CP032352|4|4|4895623-4895748|CRISPRCasFinder
CGTACTATATGAGTTCGGATTCCGAACT	GAGTCCGAACTCGGCTGTTTTCCACTGAGTTCGGAATCCGAACTGAGGGGTAGAGCGGTCTGTTTTCCTG
AGTTTTCACTGAGTTCGGAATCCGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032352.1\|WP_041774420.1\|4885079_4887047_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350180
NZ_CP032352.1\|WP_041774418.1\|4891024_4891222_-\|CrpP-family-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_041774417.1\|4898807_4899134_-\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP032352.1\|WP_011062923.1\|4891900_4892407_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|169261
NZ_CP032352.1\|WP_011062922.1\|4892421_4892967_-\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP032352.1\|WP_011062919.1\|4896464_4897091_-\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP032352.1\|WP_011062918.1\|4897132_4898806_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP032352.1\|WP_138641109.1\|4884485_4885013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011062921.1\|4892963_4893695_-\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP032352.1\|WP_011062928.1\|4881315_4883157_-\|PilN-family-type-IVB-pilus-formation-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274177
NZ_CP032352.1\|WP_050783813.1\|4902414_4902687_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011062915.1\|4900375_4900894_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011062925.1\|4887043_4888924_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379539
NZ_CP032352.1\|WP_011062911.1\|4904330_4904714_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011062914.1\|4901068_4902418_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP032352.1\|WP_011062924.1\|4889013_4890930_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|223624
NZ_CP032352.1\|WP_080512200.1\|4900152_4900383_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032352.1\|WP_011062927.1\|4883153_4884299_-\|pilus-biosynthesis-protein-PilL	unknown	unknown	gnl\|CDD\|163460
NZ_CP032352.1\|WP_011062916.1\|4899151_4900153_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP032352.1\|WP_011062912.1\|4903082_4903772_-\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525

Protein	Function_ID	Function_description	E-value
NZ_CP032352.1\|WP_041774420.1\|4885079_4887047_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	1.96593e-38
NZ_CP032352.1\|WP_011062924.1\|4889013_4890930_-\|type-I-DNA-topoisomerase	gnl\|CDD\|223624	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair].	8.39779e-153
NZ_CP032352.1\|WP_041774417.1\|4898807_4899134_-\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	1.44369e-12
NZ_CP032352.1\|WP_011062923.1\|4891900_4892407_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|169261	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional.	9.58366e-75
NZ_CP032352.1\|WP_011062922.1\|4892421_4892967_-\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	6.61135e-83
NZ_CP032352.1\|WP_011062919.1\|4896464_4897091_-\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	9.85681e-60
NZ_CP032352.1\|WP_011062918.1\|4897132_4898806_-\|hypothetical-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	1.22916e-156
NZ_CP032352.1\|WP_011062921.1\|4892963_4893695_-\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	6.77529e-116
NZ_CP032352.1\|WP_011062928.1\|4881315_4883157_-\|PilN-family-type-IVB-pilus-formation-outer-membrane-protein	gnl\|CDD\|274177	TIGR02520, putative_Type_IV_pilus_protein, type IVB pilus formation outer membrane protein, R64 PilN family. Several related protein families encode outer membrane pore proteins for type II secretion, type III secretion, and type IV pilus formation. This protein family appears to encode a secretin for pilus formation, although it is quite different from PilQ. Members include the PilN lipoprotein of the plasmid R64 thin pilus, a type IV pilus. Scoring between the trusted and noise cutoffs are examples of bundle-forming pilus B (bfpB). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP032352.1\|WP_011062925.1\|4887043_4888924_-\|hypothetical-protein	gnl\|CDD\|379539	pfam14284, PcfJ, PcfJ-like protein. The PcfJ-like protein family includes the E. faecalis PcfJ protein, which is functionally uncharacterized. It is found in bacteria and viruses, and is typically between 159 and 170 amino acids in length. There is a conserved HCV sequence motif.	2.19539e-09
NZ_CP032352.1\|WP_011062916.1\|4899151_4900153_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_CP032352.1\|WP_011062927.1\|4883153_4884299_-\|pilus-biosynthesis-protein-PilL	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	1.96343e-55
NZ_CP032352.1\|WP_011062914.1\|4901068_4902418_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP032352.1\|WP_011062912.1\|4903082_4903772_-\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	2.4687e-09

>NZ_CP032352.1|WP_011062921.1|4892963_4893695_-|TIGR03761-family-integrating-conjugative-element-protein
MADNFQLNIGSLRSQVQLTLHTHHAARIWLGRQQSESKNSILGLAGFCSRVNQMDRGASQDDPFSDWWIIRIEDKIAESDAALTEIDKRLDDVMAQLPAMIDIGTNLSTHPMKLPLFISNPLGFKSVYLLTKYDEIVRRILLAKHVGLIGRRDGEVWIDDGAHILRSLFGLAQQYRFSGASRDDFAANNARAEQARQMYQRAGEIPQNILEGTRRSSFAPEIRRGQPTLSERLEAEPFDEGEE
>NZ_CP032352.1|WP_011062922.1|4892421_4892967_-|DUF3158-family-protein
MTQSIGGRALGNLQQGAFKPLQQGAYQGLQQGASLKGLLKPFKGKGELDQLAEQCTALEAGLRALVHEVLAQVREHPFALLPVRLIEQNTSAGTTFLRWQSVQGRRMGVGVWAEMVHAPKTPVHLLQDLFALEQHRITLNMQISLIHFIGKQAAECAEKMGQAEAVYTARLQQLTNQPQRN
>NZ_CP032352.1|WP_011062923.1|4891900_4892407_-|single-stranded-DNA-binding-protein
MGTPVVWEGNIGNPPEHKSFPNGNNEPRQLLRLNVMFDNSIPDGSGGYKDRGGFWANVEWWHPDAERFAQLFSKGMRVVVTGRAIMDTWKDKETGDDVWALKVEANRVAILPHRVNQVTMTQSNNTGQRQNAQQNNRPERQQNSAQQPGQHTDDLSHYGNGFDDDIPV
>NZ_CP032352.1|WP_041774418.1|4891024_4891222_-|CrpP-family-protein
MTDQPARVKIDRRKFNNPHPTVEAAGAAAAQKGFPVHACPYKHPAMLSSWLKGYKRAQQLTFAFS
>NZ_CP032352.1|WP_011062924.1|4889013_4890930_-|type-I-DNA-topoisomerase
MKLMIIEAPGKLKKLAPMLKKLRPGEHWEVVASGGHIRDLPEKGHDDTMIIAGVLKDLRPVYTIRDKSSGRIKTMREALARATEIYIATDPDREGESIAWHIQQTLRIRDYKRIAFNEVTHTRVKEALANPRKIDAQLVASQECRRVLDRLVGYLVTGELRRVLGLPTTAGRVQSVAVYLVVLREREIRDFKVVHHFGVRLQFQNQTTGSSWTADWVTVPDFTSKEHPYVQDGTLAAQVAGVRNVIVESCEDTKERRAPYPPYISSTLQQAASVALKWDPDKTMQIAQRLYEQGVITYHRTDNPNVGDDVMGDIRAVAQALGIPAVEKRREFRAAEGAQLGHPAIAPTTWADEVAGEDDEQRQLYKLIRIRALASQLADAIYDARIVKLLAKGPDQRPLRFSGSCRTVAYRGWMQLLAGDDTDEEGAEAANNEIPKLEPKQILPVLNGQVLNQKTKAPPRYTKASLVKELERQGIGRPGTFASIIKNITSRSQVIEEKRKLIPGPLGEQTIAQLEGRFSFVQTQFTSSMERALDKIADGQSTYNAVVSKFYEHLQRELSSLKDAPSLRMQSARTSASTTTGPEHQYLCGKCGKHLVRRQKRGEGGYDFWACSGYKDTGCKVSYPSVKEKPDLTKARGL
>NZ_CP032352.1|WP_011062925.1|4887043_4888924_-|hypothetical-protein
MEAPQDTTHPFEADPTLKCYSAKQVAVASTWAEHFCIPVARRRQFLRDYLRSTSSTRCWTISVVYQGQILVICRLGSMLQWFDGRSIKAATITKQSRIPLSTPSSRAAQGLAGRLESLRRTSAMAVLTSFCRTARHLGQQLVREDLGETFAGVTLQSDEVRGTHRRYTQPRTNFYMKQIGSSIKAFCSHLDPAILFALRSARCPDPRVYNWLAAGDQTRRLQALKAQPVLLPLIVILSWSSDDLPLWPTQGELIYEAPPWPTVQELTPAQGTITPGAEANFIGAAADQGISVSDVLSWLFKTPKSSIRFLGTCRPGHIGGALSQLQREGRNAGWHQLLLGATAGNRRPRNRSDWKVFLVLIQQLPYEILFHVSKQKLNLNLLFKGCPTSWNDPTWPYVIAGIKDYTEIYRNLEYQRQDARKKVSDFFLRSNYAEIANKVELFHQDLPRIRVQIDNTLGVLEQADELFEWPPLLLSGPITCPNGIEIVELLCPNDLFEEELRMHHCVGSYDYSTYRGDCRIVSLRHNGNSIATAELRIDKKIKSSSKHPRVVCAQLRSHRNAPISTGTPAKTAFDWFLTQLNSGVITSNLSWPNLTRGMARYTRSSRQELLEEEVANWVDRHLVGRA
>NZ_CP032352.1|WP_041774420.1|4885079_4887047_-|DEAD/DEAH-box-helicase
MSRPRMMNRQPVLIEKAVFDGYDFGIQMPFIEGANKVLLRRGGFFIRRGEHPLNRHWRIPKNKLNSELDLVFHELIELGQDRFTESWQSFQEKLEQAQASPQRDAFIWGMQLRIAPLAGRGVLLSGDYHPGVVAVARRMRGVFLGKSTSWRIDASAELVRSNLILELGLAEEQIGLLDIVQELLDDGSVAPAEGIPRISLGGPPQEAMEATSTEEVSNEIYLAAVSPIERTEYSAQAISKALEGYSLLDHQPAGIAHLLQRTSALLADDMGLGKTRQAVIAAHIRAAGLPILVVTLSSLLINWEREIHVVYPAATVAQQKFAPEAQWMIINYERLGDYVTVAERYAVMVIDEAHRLKEPTALWTRHGFDIAAKIPNRYLLTGTPILNRETELHTLLRLSGHSIGQLPLKDFCEQFSGSPEFRQNLRAQLGDWMLRRRKDVLPGLKSKQRQLLAIAMSDEERRQYDVIRLEDKPIFARLGALRFYLEQLKIRIAMDLLSELDPDDKVILFCEFKPTVAALKALCEEAGIGHVTLVGSDSPAKRQKAIDRFQQDPDCRVFICTTSAAGTGNNLTAANYVFFLGLPWTPGQQDQAEDRAYRNGQLRMVIVKIPLIEASIDQQLWELLLAKRQVSLELIEPEGQQEALAKTLLAASMGH
>NZ_CP032352.1|WP_138641109.1|4884485_4885013_-|hypothetical-protein
MSKLVYLKILPLLILSIISPFLAVLSRGKLDLQVREIFNKLTFGEPSLLEHFLTGFFVPGAFILLYATANVFIKTKPIKIKPIIRSLAWQKLRKKIISLTRPTHIVHFAALAAIIYSFLCFAWEFDQFEKNGFFQYNQFAMDLLGGFVFCITLASILRTNSHSARARRSIVLGKF
>NZ_CP032352.1|WP_011062927.1|4883153_4884299_-|pilus-biosynthesis-protein-PilL
MIRQLTTLSLVALIAGCASQKAESPKPTSAFDSSRNPEWLSPDLYPNGAVPAKEPVVRYGRYTLVSTEPGSSQRDLMAQIIDVTIPSGMSPSIRDAMLYVVDRSGYTLCSPSTPHVNILYTRPLPAAQYKLGPMTLRNTLQVLAGPAWQVKVDEVNRQVCFVLRPGYQLPDPVASSAQLYAAKSPTTLPPAPPSADKASTVVVTAVPSASAITAVTPAGVQESSATTQTLSPVVPAKDGPTIHKAVPSVAPSSSAVPITSLASSSAEASKKAVPAVTTAPQKSPIPNPTPVPAKPLPEIWAASTGSTLRQSVEAWAQKANWTLLWEPEDLDYPIAAPLRFEGSFEEAIKQVFPLYDKAPRSFVVDGSAAQRLIHIAERKKK
>NZ_CP032352.1|WP_011062928.1|4881315_4883157_-|PilN-family-type-IVB-pilus-formation-outer-membrane-protein
MTPLFRFRWAAVLVTLPLISSCAVQRVNDSASRAENEASTARQYNGYLQNQQPEPARDTVIFSEKPWVSTQPLVTKRGLPLNIDRDIAYRPASAVSLSEVAQFITRETGLPVVVAPDALNPSILSSRPGNSGAAAAPPAVTMSNPDNLAALMPTGLAGSLPSGARSLESELLSGTPGLISGIKFSGPVSALLNQVTSRLGLSWHYDPQLQGARITYFDTRTFDVWAFGDDQVIESVVKSGLITSTGSGSNGSGGTSSGTGASGDSGSNQSTTVQIKTSLLSDIENNVKAMLSTQPAGRIFLSRSTGTLTVSDRPEVLNRIASYLQSTNRNITRQVLFNVKIFEVNFTDRDQTAVNWKAVYKSVSGRWGLSLANKVAGISTDAISGSVSILDTSSSPWAGSSAVIQALSEQGRISDVRSPSITTLNLQPAPIQIGNVKSYVASSSTTTTASVGSSTSLTPATITSGFNMMLLPKIIDRDNMLLMISISMSSKPTFTTFTSNGSSVQTADFDTKNAAPKVLLRSGQTLVLTGFEENTENADKTGVGDASFFGLGGSRTRSSDHSALVVLVTPVVLPDDLGASAQGQPSSIPSLAQGINTFPSTSCRPPIRACNTL
>NZ_CP032352.1|WP_011062919.1|4896464_4897091_-|DUF2857-domain-containing-protein
MTKSTINEAVLSQLLDLVRNGQLQRCREMGLEPEVLGQIQHPTVLSLLRNTPVTWVNVSINSSMIQKLLSNAARTEEEARVIERAIRLGATTKLLKNFFGLSPQEIALQRAVIGVKAPHGRWPAVSEDQEHQIWYRWTNLMKQNQVSLEDSLAMLDIAMLVAEELIADGLTLAQIWSFITHWIENRIYPGNNHRDRQARRLEQGEHTQ
>NZ_CP032352.1|WP_011062918.1|4897132_4898806_-|hypothetical-protein
MTDLKARLLAPGFSPSAATTVLSDPLADTPIVATIDEVLPWEDNPRTTRNPKYDEIKESIRNRGLDTPPPVTRRPGEEKYRIRNGGNTRISILKELYQETGDEQYYRINLLFKPWDQARGEIVMLTGHLAEDLKGELKFIERAVGVGRAKALYESETGESIGVRELARRLTKDGYPISHSHISRMLDTIQHLLPCVPNLLYSGLGYDRITKILALRKTSSLCWNKHYIGVGVDFEMLFQDVLAQFDGEVEEFLYQRFQDELIGTMKKSLPLGYEDILLEITQEQDQLRRSTPVVQLPTNNHVPAAVPLQSAPSEKPAPSPQGSTAPGNNQPSRPNTSQSSSGPNEPSPSPEEMQARIDGHIASPVTQTARVIEMKKKLAAIEGEQLPDFNSNCLQSIPVQAGGLNPISDLWYIEREIDSSEQLRKHIAQLALEIQESVNAPGQIIEIPAGIGYSYRQPTEESEDTATAVHTMTLLQSLSGAVAIALQMIRESPDADLSSLKDFEFAAGLGQLLIGQPSTKDLEPNDQGRISDGALVKLFRIIRLARRLIDIEIKQSA
>NZ_CP032352.1|WP_041774417.1|4898807_4899134_-|Arc-family-DNA-binding-protein
MDQTTSRTADKFVVRLPDGMRDRIAQVARDNTRSMNSEIINRLEQSLLVSQVDAANPLKADLERAYRIIDRLLQVASPSTEDVQEILELFKCGTPRASFPAMNSSAGV
>NZ_CP032352.1|WP_011062916.1|4899151_4900153_-|nucleoid-associated-protein-YejK
MPIRHLIIHHIDKQPDGTPAALHSRDSELAESAVLENMLVDLNESYNAKQGKAWGLFHPESGAFPLSGWLKEFFNGELDFTAFSHKAVDHLQKLMEESNLSVGGHVMFAHYQQGMIDYLAIALLHHSEGVAVTDQLDVTPSRHLDLGQLQLAARINVSEWQNNKQSKQYISFIKGKNGRKSTEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPEDSAREKTKALVDYASSQAKLGEPVGLEELSELIDEDRPKAFYEHIRNKDYGLSPEFPTDKRTLNQFRRFTGRAEGLSITFEAHLLDTNVIYDADSGALTIKNLPTQLVDQLKRR
>NZ_CP032352.1|WP_080512200.1|4900152_4900383_-|hypothetical-protein
MSRPPKVHERLRHLVEFAISNGWAVSRSVGGHLRFKKTGCSDIYTSATPGDHRSERNARARLRRADRTTPLSKEIS
>NZ_CP032352.1|WP_011062915.1|4900375_4900894_-|hypothetical-protein
MRSSTSYFPKIHADAEFNQSALVHAHRAGVNAVELDLLSQAVTRLVRDHSTIVPGAMSDNFAEMENLGYVRLTPTTSGTLDVDLLCPGPLLSNYFWSVWVPRHLFECSMKVTVLPRLDDDAITQYCTVAFRIPGDKEAARFFLMDLGSKYPGHDPEIIAIQAGNQLRTELHE
>NZ_CP032352.1|WP_011062914.1|4901068_4902418_-|replicative-DNA-helicase
MNPLDFTPPHSTEAEQGVLGGLMLDNNTWDLIADLLVPEDFFKREHRLIFQAIASLADKDHPFDIVTVSESMSQPEEVGGLAYLGDLARNTPSVANIERYAEIVRNRSHLRSLMSLGYQCSRDAAESTAVATDVQESIEQQLFALAQNRTRSDFVDVNQALGAVINKIDEHFNGNVTVTGVSSGIDDLDEMTSGFQPTDLIILAGRPSMGKTALALKFVHAALRQCSDNESVQVYSIEMPAQALLFRLISSIGHVDLTKLLKGKLEDEDWPKLTNAVHQLNGFGDRLVIDDGSSLTPAALRAKARRASRRFGKPKLILIDYLQLMSAVGEENRNNEISVISRSLKALGKEMDCPVIALSQLNRSVEGRPNKRPVNADLRESGAIEQDADVIMFVYRDEYYHPESEHKGIAEIIIGKQRQGPVGFARAAFIPQQTRFENLAPASWQGGGA
>NZ_CP032352.1|WP_050783813.1|4902414_4902687_-|hypothetical-protein
MFAHPDLPNFEEDPDKSRLWLQEQGLEICSVGLETDAPEEIADRYFRSDSPDCSYWEPSMPEGEGWFCLAIHDTEDGGPYCFWARREVTP
>NZ_CP032352.1|WP_011062912.1|4903082_4903772_-|DUF2786-domain-containing-protein
MEKQKVLDKVSKLLALANDCGASPNEAETALRQARHLMKQYNLESLEVAAHAVEEVCVPTRTARPPKDWLHRLAATCARAFDCEHLAFHSGLVGWSIKFMGIGIGPELAAYAYSALHHQLVMQRKAHVALQKRCQLKTKRRRGELFVDGWLSAISYKVAQFAGADAEPRDEIKAYISLHHPTLEYMDLDRPEAKGHDIRSRQAGWQQGKQANLARGLSHKERASIGGGR
>NZ_CP032352.1|WP_011062911.1|4904330_4904714_-|hypothetical-protein
MSRSYVSKNALPVTARMLRGRLNTIIRQDEALTHQQLRLSLDGMSYPVTNANLQISDDGVIELEIYQPNAAVAAIAYALANPCESPLDFLRCWNSGDFEAIRQEWDDVPEEVFLGADPLHKVMEDRS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

909887 : 1003336

uncultured_Caudovirales_phage(65.79%)

lysis,capsid,head,protease,portal,tail,holin,integrase,terminase,tRNA,plate

attL 960930:960948|attR 1002392:1002410

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011060382.1\|909887_910712_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_011060381.1\|910940_911600_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_041774140.1\|911677_914278_-	FimV family protein	NA	NA	NA	NA
WP_011060380.1\|914483_915494_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_011060379.1\|915673_916786_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_011060378.1\|916840_917923_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_011060377.1\|917974_918739_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011060376.1\|918833_919478_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_011060375.1\|919488_920907_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_011060374.1\|921060_921951_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011060373.1\|922034_925313_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	1.0e-14	31.7
WP_011060372.1\|925361_925808_-	Hsp20 family protein	A0A1D8KN82	Synechococcus_phage	1.3e-18	39.8
WP_011060371.1\|925922_926882_-\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
WP_011060370.1\|927026_927461_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_011060369.1\|927509_928343_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_011060368.1\|928369_928909_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011060367.1\|930166_931648_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_041752090.1\|931880_932927_+	HlyD family secretion protein	NA	NA	NA	NA
WP_011060365.1\|932916_934467_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_011060364.1\|934579_936595_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_011060363.1\|936932_938129_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_011060362.1\|938259_938457_+	hypothetical protein	NA	NA	NA	NA
WP_011060361.1\|938463_938697_-	hypothetical protein	NA	NA	NA	NA
WP_011060360.1\|939567_940725_+	MFS transporter	NA	NA	NA	NA
WP_041774138.1\|940818_941406_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_011060358.1\|941468_943010_-	purine permease	NA	NA	NA	NA
WP_011060357.1\|943478_944303_-	arylamine N-acetyltransferase	NA	NA	NA	NA
WP_011060356.1\|944505_945081_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011060355.1\|945116_945638_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011060354.1\|945641_947213_-	diguanylate cyclase	NA	NA	NA	NA
WP_011060353.1\|947398_948259_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011060352.1\|948356_949007_+	FMN-dependent NADH-azoreductase 3	NA	NA	NA	NA
WP_011060351.1\|949288_950104_+	ABC transporter permease	NA	NA	NA	NA
WP_011060350.1\|950093_951368_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	9.6e-06	21.9
WP_011060349.1\|951364_952741_+	polysaccharide pyruvyl transferase family protein	NA	NA	NA	NA
WP_011060348.1\|952746_953439_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_011060347.1\|953431_955621_+	glycosyltransferase	NA	NA	NA	NA
WP_011060346.1\|955725_956673_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011060345.1\|956698_958771_+	glycosyltransferase	NA	NA	NA	NA
WP_011060344.1\|958767_959871_+	hypothetical protein	NA	NA	NA	NA
WP_011060343.1\|959854_960754_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
960930:960948	attL	NA	NA	NA	NA
WP_011060342.1\|961299_962700_+	AAA family ATPase	NA	NA	NA	NA
WP_080512178.1\|962696_963599_+	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_011060341.1\|963789_965070_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.3e-111	50.0
WP_041774135.1\|965062_965488_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A218MND2	uncultured_virus	3.2e-14	35.8
WP_011060340.1\|965585_966269_+	hypothetical protein	A0A2H4J991	uncultured_Caudovirales_phage	1.3e-105	76.9
WP_105625690.1\|966334_967912_-	hypothetical protein	NA	NA	NA	NA
WP_011060338.1\|968144_968666_-\|lysis	lysis protein	A0A2H4JBH9	uncultured_Caudovirales_phage	2.7e-31	51.5
WP_011060337.1\|968662_969214_-	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	1.3e-68	73.2
WP_011060336.1\|969240_970284_-	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.1e-153	77.8
WP_011060335.1\|970364_970835_+	hypothetical protein	NA	NA	NA	NA
WP_011060334.1\|970831_971038_-\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.2e-21	70.1
WP_085983357.1\|971012_971777_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.6e-95	67.6
WP_011060332.1\|971866_974434_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.5e-74	33.4
WP_011060330.1\|974575_974881_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	6.6e-22	61.3
WP_011060329.1\|974892_975402_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	7.3e-66	72.5
WP_011060328.1\|975414_976581_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	6.0e-180	80.7
WP_011060327.1\|976726_977509_-	hypothetical protein	NA	NA	NA	NA
WP_011060326.1\|977508_978735_-	hypothetical protein	A0A2H4JF09	uncultured_Caudovirales_phage	1.5e-77	72.1
WP_011060325.1\|978731_979337_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	4.2e-76	70.7
WP_011060324.1\|979338_980220_-\|plate	baseplate assembly protein	A0A2H4JFK9	uncultured_Caudovirales_phage	3.4e-95	62.1
WP_011060323.1\|980216_980543_-	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.3e-36	69.4
WP_011060322.1\|980547_980748_-	hypothetical protein	NA	NA	NA	NA
WP_011060321.1\|980812_981403_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.1e-56	74.3
WP_011060320.1\|981399_981912_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	9.1e-48	55.0
WP_011060319.1\|981904_982558_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	4.1e-69	62.7
WP_011060318.1\|982554_982869_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	6.2e-31	65.0
WP_011060317.1\|982871_983867_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	6.7e-164	84.3
WP_011060316.1\|983930_984275_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	5.7e-46	84.2
WP_011060315.1\|984271_985414_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	3.5e-140	70.0
WP_011060314.1\|985410_986892_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	9.8e-236	80.7
WP_011060313.1\|986891_987098_-	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	2.5e-25	85.3
WP_041774131.1\|987099_989112_-\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	81.1
WP_011060311.1\|989116_989689_-	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	6.5e-63	69.4
WP_011060310.1\|989894_990239_-\|holin	pyocin R2, holin family protein	B5TK61	Pseudomonas_phage	1.1e-46	80.9
WP_041774129.1\|990759_991125_-	hypothetical protein	NA	NA	NA	NA
WP_011060308.1\|991117_993337_-	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	9.0e-193	47.1
WP_041774127.1\|993329_993554_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	2.0e-07	40.6
WP_085983351.1\|993546_994107_-	hypothetical protein	NA	NA	NA	NA
WP_080512177.1\|994413_994686_-	hypothetical protein	A0A0D4DBS7	Acinetobacter_phage	1.7e-08	41.6
WP_011060305.1\|994762_995476_+	peptidase S24	A8CGC0	Salmonella_phage	4.1e-22	35.4
WP_080512207.1\|995556_995736_+	hypothetical protein	NA	NA	NA	NA
WP_011060303.1\|995732_996317_+	hypothetical protein	NA	NA	NA	NA
WP_011060302.1\|996326_996611_+	DNA-binding protein	NA	NA	NA	NA
WP_016966897.1\|996597_996777_+	hypothetical protein	NA	NA	NA	NA
WP_011060301.1\|996769_997096_+	transcriptional regulator	NA	NA	NA	NA
WP_011060300.1\|997140_997560_+	hypothetical protein	NA	NA	NA	NA
WP_011060299.1\|997556_997778_+	hypothetical protein	NA	NA	NA	NA
WP_050783807.1\|997819_998116_+	hypothetical protein	NA	NA	NA	NA
WP_011060297.1\|998105_999839_+	DNA cytosine methyltransferase	L7TH64	Pseudomonas_virus	2.0e-192	64.2
WP_011060296.1\|1000362_1000836_+	hypothetical protein	NA	NA	NA	NA
WP_041774123.1\|1000832_1001114_+	Pyocin activator protein PrtN	A0A2K8HN48	Pseudomonas_phage	7.2e-31	75.5
WP_011060295.1\|1001082_1002225_-\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	2.4e-165	74.5
WP_011060294.1\|1002325_1003336_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
1002392:1002410	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1780247 : 1825839

Pseudomonas_phage(78.26%)

bacteriocin,holin,tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011059600.1\|1780247_1781963_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_011059599.1\|1781980_1782934_+	hypothetical protein	NA	NA	NA	NA
WP_041774087.1\|1782998_1784066_-	DNA polymerase IV	NA	NA	NA	NA
WP_011059597.1\|1784995_1787644_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_011059596.1\|1787643_1788942_+	virulence factor family protein	NA	NA	NA	NA
WP_041774084.1\|1789010_1789196_+	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_011059595.1\|1789363_1791265_-	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	7.7e-76	34.2
WP_011059594.1\|1791585_1792923_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_011059593.1\|1793040_1793514_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011059592.1\|1793596_1794307_+	RNA-binding protein S4	NA	NA	NA	NA
WP_011059591.1\|1794373_1794835_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.2e-36	49.3
WP_011059590.1\|1794962_1795733_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_011059589.1\|1795850_1796546_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_003198368.1\|1796668_1797448_-	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_011059588.1\|1797567_1798494_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011059587.1\|1798495_1798858_-	diacylglycerol kinase	NA	NA	NA	NA
WP_011059586.1\|1798933_1799584_-	response regulator transcription factor	NA	NA	NA	NA
WP_011059585.1\|1799822_1800728_+	DMT family transporter	NA	NA	NA	NA
WP_011059584.1\|1800711_1801422_-	DTW domain-containing protein	NA	NA	NA	NA
WP_011059583.1\|1801613_1802039_+	hypothetical protein	NA	NA	NA	NA
WP_011059582.1\|1802039_1802234_-	hypothetical protein	NA	NA	NA	NA
WP_011059581.1\|1802677_1803796_+	LOG family protein	NA	NA	NA	NA
WP_011059580.1\|1803836_1804304_-	recombination regulator RecX	NA	NA	NA	NA
WP_011059579.1\|1804312_1805365_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.0e-113	61.0
WP_011059578.1\|1805448_1805949_-	CinA family protein	B5TK85	Pseudomonas_phage	5.2e-72	84.3
WP_011059577.1\|1806249_1807092_-\|bacteriocin	putidacin L1 family lectin-like bacteriocin	NA	NA	NA	NA
WP_080512171.1\|1807100_1807286_-	Com family DNA-binding transcriptional regulator	B5TK59	Pseudomonas_phage	1.3e-12	89.5
WP_011059576.1\|1807359_1807875_-	hypothetical protein	A0A2H4JAC5	uncultured_Caudovirales_phage	5.0e-22	49.1
WP_011059575.1\|1807982_1808546_-	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	6.2e-82	78.9
WP_138641101.1\|1808596_1808884_-	hypothetical protein	B5TK82	Pseudomonas_phage	4.5e-12	50.0
WP_011059572.1\|1810094_1810694_-	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	4.0e-95	82.9
WP_011059571.1\|1810681_1811722_-\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	2.6e-158	82.7
WP_011059570.1\|1811711_1812110_-	hypothetical protein	B5TK74	Pseudomonas_phage	4.7e-60	82.6
WP_011059569.1\|1812112_1812619_-\|plate	phage baseplate assembly protein V	B5TK73	Pseudomonas_phage	2.1e-73	85.7
WP_011059568.1\|1812728_1813769_-	hypothetical protein	B5TK72	Pseudomonas_phage	2.0e-150	78.8
WP_011059567.1\|1813772_1815017_-	2-hydroxyacid dehydrogenase	B5TK71	Pseudomonas_phage	8.9e-174	74.0
WP_011059566.1\|1815006_1816605_-\|tail	tail protein	B5TK70	Pseudomonas_phage	3.1e-62	61.6
WP_011059565.1\|1816735_1817032_-\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	3.6e-41	89.8
WP_011059564.1\|1817028_1817376_-\|tail	phage tail protein	B5TK68	Pseudomonas_phage	1.7e-53	86.1
WP_011059563.1\|1817442_1818939_-\|tail	tail sheath protein	B5TK67	Pseudomonas_phage	5.0e-248	87.3
WP_011059562.1\|1818938_1819121_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.9e-22	86.7
WP_011059561.1\|1819117_1819699_-	hypothetical protein	B5TK65	Pseudomonas_phage	6.4e-66	63.0
WP_011059560.1\|1819856_1820993_-	glycosyl hydrolase	NA	NA	NA	NA
WP_011059558.1\|1821458_1821809_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	3.2e-52	89.6
WP_041774082.1\|1822326_1823073_-	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	3.0e-124	89.9
WP_011059556.1\|1823259_1825839_+	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	2.1e-28	24.2

DBSCAN-SWA_3

3711929 : 3771228

Burkholderia_phage(22.22%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011063943.1\|3711929_3713633_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.5e-51	30.1
WP_011063942.1\|3713768_3715241_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_011063941.1\|3715349_3715943_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_011063940.1\|3716372_3718382_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	26.8
WP_011063939.1\|3718548_3719727_-\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-26	37.4
WP_011063938.1\|3719723_3720569_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_011063937.1\|3720639_3721596_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011063936.1\|3722023_3723400_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_011063935.1\|3723812_3724916_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_011063934.1\|3724916_3725363_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_015637320.1\|3725425_3725689_-	hypothetical protein	NA	NA	NA	NA
WP_050783803.1\|3725965_3726430_+	DUF4952 domain-containing protein	NA	NA	NA	NA
WP_011063931.1\|3726684_3727845_-	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_011063930.1\|3727869_3728346_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
WP_011063929.1\|3728454_3729420_-	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_011063928.1\|3729579_3730467_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_011063927.1\|3730555_3731500_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011063926.1\|3731694_3732654_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_011063925.1\|3732691_3733108_-	DUF3010 family protein	NA	NA	NA	NA
WP_011063924.1\|3733142_3733466_-	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	2.6e-32	68.5
WP_011063923.1\|3733449_3733704_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	6.1e-21	57.1
WP_011063922.1\|3733803_3734718_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011063921.1\|3734899_3736237_+	purine permease	NA	NA	NA	NA
WP_011063920.1\|3736292_3736802_+	nucleoside deaminase	NA	NA	NA	NA
WP_011063919.1\|3736798_3737149_+	transthyretin	NA	NA	NA	NA
WP_011063918.1\|3737257_3737659_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_072443623.1\|3737672_3737870_-	hypothetical protein	NA	NA	NA	NA
WP_011063917.1\|3737895_3738873_+	membrane dipeptidase	NA	NA	NA	NA
WP_011063916.1\|3739034_3739565_+	hypothetical protein	NA	NA	NA	NA
WP_011063915.1\|3739580_3741641_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_011063914.1\|3741755_3743705_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_011063913.1\|3743704_3744925_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_011063912.1\|3744934_3745705_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_011063910.1\|3747596_3748892_-	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_085983355.1\|3748962_3749097_-	protein GbcA	NA	NA	NA	NA
WP_011063909.1\|3749183_3750284_+	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_011063908.1\|3750362_3751190_-	carbon-nitrogen hydrolase	M1I5Z5	Acanthocystis_turfacea_Chlorella_virus	1.3e-19	34.1
WP_011063907.1\|3751186_3752632_-	cytosine permease	NA	NA	NA	NA
WP_011063906.1\|3753011_3754052_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_011063905.1\|3754152_3754893_+	conjugal transfer protein TraX	NA	NA	NA	NA
WP_011063904.1\|3755204_3756458_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.9e-100	53.2
WP_011063903.1\|3756481_3757732_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_011063902.1\|3757746_3758049_+	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_011063901.1\|3758045_3761063_+	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_011063900.1\|3761116_3761749_+	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_011063899.1\|3761905_3762763_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_011063898.1\|3762933_3764133_+	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	6.5e-12	28.9
WP_019094048.1\|3764324_3764909_-	hypothetical protein	NA	NA	NA	NA
WP_011063896.1\|3765066_3765741_-	anti-sigma K factor	NA	NA	NA	NA
WP_011063895.1\|3765737_3766382_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_011063894.1\|3766605_3767172_+	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_011063893.1\|3767310_3767739_+	DUF350 domain-containing protein	NA	NA	NA	NA
WP_011063892.1\|3767749_3768448_+	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_011063891.1\|3768444_3769602_+	glutathionylspermidine synthase family protein	Q19CT2	Aeromonas_virus	1.4e-67	36.5
WP_011063890.1\|3769602_3770490_-	acyltransferase	NA	NA	NA	NA
WP_011063889.1\|3770727_3771228_+\|protease	ATP-dependent zinc protease	NA	NA	NA	NA

DBSCAN-SWA_4

5809872 : 5816092

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011062164.1\|5809872_5811153_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.2e-98	54.1
WP_011062163.1\|5811153_5812548_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_011062162.1\|5812619_5813621_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_011062161.1\|5813709_5814711_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	3.1e-169	86.8
WP_011062160.1\|5814707_5815043_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	6.1e-45	78.4
WP_011062159.1\|5815039_5815336_-	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.9e-29	67.7
WP_011062158.1\|5815335_5815698_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	5.2e-42	70.0
WP_011062157.1\|5815699_5816092_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.2e-54	78.3

DBSCAN-SWA_5

5890093 : 5932116

Pseudomonas_phage(53.85%)

head,tail,integrase,holin,terminase

attL 5888116:5888131|attR 5902325:5902340

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5888116:5888131	attL	NA	NA	NA	NA
WP_011062083.1\|5890093_5891143_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	3.0e-106	58.3
WP_041774360.1\|5891144_5891387_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_011062081.1\|5891633_5893289_-	DNA cytosine methyltransferase	A0A2I7QRH3	Vibrio_phage	8.1e-106	44.3
WP_151172170.1\|5893339_5893891_+	hypothetical protein	NA	NA	NA	NA
WP_011062079.1\|5894065_5894824_-	hypothetical protein	A0A2H4J7T1	uncultured_Caudovirales_phage	4.8e-114	76.6
WP_041774358.1\|5894934_5895129_+	hypothetical protein	NA	NA	NA	NA
WP_041774356.1\|5895125_5895491_-	hypothetical protein	NA	NA	NA	NA
WP_041774355.1\|5895601_5896156_+	hypothetical protein	NA	NA	NA	NA
WP_041774354.1\|5896247_5896550_+	hypothetical protein	NA	NA	NA	NA
WP_011062078.1\|5896546_5896858_-	hypothetical protein	NA	NA	NA	NA
WP_011062077.1\|5896939_5897401_-	hypothetical protein	A0A2H4J101	uncultured_Caudovirales_phage	1.8e-50	64.1
WP_011062076.1\|5897397_5897625_-	hypothetical protein	NA	NA	NA	NA
WP_011062075.1\|5897632_5898196_-	siphovirus Gp157 family protein	A0A2H4IZG3	uncultured_Caudovirales_phage	1.2e-74	77.0
WP_011062074.1\|5898192_5898939_-	hypothetical protein	I3PUZ3	Vibrio_phage	4.3e-46	40.3
WP_011062072.1\|5899248_5899449_-	hypothetical protein	NA	NA	NA	NA
WP_041774353.1\|5899445_5899637_-	hypothetical protein	A0A1B0VMB8	Pseudomonas_phage	2.4e-09	50.0
WP_011062070.1\|5899633_5900065_-	hypothetical protein	NA	NA	NA	NA
WP_041774351.1\|5900572_5900773_-	hypothetical protein	NA	NA	NA	NA
WP_011062067.1\|5902598_5903522_-	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	1.6e-50	36.5
5902325:5902340	attR	NA	NA	NA	NA
WP_011062066.1\|5903667_5903904_-	hypothetical protein	NA	NA	NA	NA
WP_011062065.1\|5903948_5904494_-	DUF4410 domain-containing protein	NA	NA	NA	NA
WP_011062064.1\|5904549_5905338_-	helix-turn-helix domain-containing protein	B5TK58	Pseudomonas_phage	1.3e-69	64.0
WP_041774348.1\|5905454_5905658_+	hypothetical protein	A0A2H4JF66	uncultured_Caudovirales_phage	1.7e-21	74.6
WP_041774345.1\|5905740_5906163_+	Rha family transcriptional regulator	A0A2D1GNM7	Pseudomonas_phage	1.2e-32	50.7
WP_011062062.1\|5906165_5906570_+	hypothetical protein	NA	NA	NA	NA
WP_138641061.1\|5906559_5907012_+	hypothetical protein	NA	NA	NA	NA
WP_050783793.1\|5907014_5907818_+	phage antirepressor protein	A0A2H4J5H6	uncultured_Caudovirales_phage	5.2e-42	39.3
WP_080512197.1\|5907820_5908234_+	HNH endonuclease	NA	NA	NA	NA
WP_011062059.1\|5908235_5909210_+	hypothetical protein	A0A1B0VME0	Pseudomonas_phage	6.2e-114	73.2
WP_050783791.1\|5909211_5909997_+	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	2.8e-56	51.9
WP_011062057.1\|5909989_5910577_+	DUF1367 family protein	Q9MC49	Pseudomonas_phage	1.7e-95	84.6
WP_011062056.1\|5910576_5911167_+	recombination protein NinG	A0A125RNK9	Pseudomonas_phage	4.7e-72	68.4
WP_011062055.1\|5911163_5911859_+	hypothetical protein	A0A1B0YZZ3	Pseudomonas_phage	3.7e-60	55.0
WP_041774343.1\|5911982_5912246_+	hypothetical protein	NA	NA	NA	NA
WP_041774341.1\|5912681_5913002_+	hypothetical protein	NA	NA	NA	NA
WP_011062053.1\|5913116_5913440_+\|holin	phage holin, lambda family	A0A1W6JTC7	Pseudomonas_phage	5.7e-24	52.5
WP_011062052.1\|5913497_5913728_+	hypothetical protein	A0A1S6UB66	Serratia_phage	2.2e-17	64.0
WP_041774340.1\|5913771_5914092_-	hypothetical protein	NA	NA	NA	NA
WP_041774623.1\|5914180_5914777_+	hypothetical protein	A0A0S2SYA5	Pseudomonas_phage	8.5e-90	78.3
WP_011062050.1\|5914808_5915270_+	DUF2280 domain-containing protein	A0A1B0VMH2	Pseudomonas_phage	1.3e-50	80.5
WP_011062049.1\|5915256_5916558_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.6e-147	59.4
WP_011062048.1\|5916554_5918018_+	DUF4055 domain-containing protein	A0A2H4J5M6	uncultured_Caudovirales_phage	1.1e-173	62.9
WP_011062047.1\|5917992_5919081_+\|head	head morphogenesis protein	A0A1B0VMF3	Pseudomonas_phage	4.5e-145	71.5
WP_041774338.1\|5919094_5919562_-	hypothetical protein	NA	NA	NA	NA
WP_011062045.1\|5919671_5920388_+	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	6.8e-33	48.0
WP_011062044.1\|5920399_5921347_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	7.4e-128	69.6
WP_011062043.1\|5921398_5921707_+	hypothetical protein	A0A2H4J0G3	uncultured_Caudovirales_phage	9.4e-08	57.7
WP_011062042.1\|5921710_5922214_+	hypothetical protein	A0A1B0VND3	Pseudomonas_phage	1.3e-78	88.0
WP_011062041.1\|5922230_5922599_+	hypothetical protein	A0A1B0VRJ4	Pseudomonas_phage	2.6e-49	79.2
WP_011062040.1\|5922595_5923249_+	hypothetical protein	A0A1B0VMI1	Pseudomonas_phage	1.0e-104	86.6
WP_011062039.1\|5923245_5923662_+	hypothetical protein	A0A2H4J4N2	uncultured_Caudovirales_phage	1.3e-44	61.6
WP_105625667.1\|5923715_5923976_+	hypothetical protein	NA	NA	NA	NA
WP_011062037.1\|5924064_5924721_+\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	1.3e-54	50.2
WP_011062036.1\|5924724_5925105_+	hypothetical protein	A0A2H4IYQ5	uncultured_Caudovirales_phage	5.7e-31	53.5
WP_011062035.1\|5925170_5925422_+	DUF1799 domain-containing protein	A0A2H4J4F7	uncultured_Caudovirales_phage	7.4e-19	57.7
WP_011062034.1\|5925418_5928742_+\|tail	phage tail tape measure protein	A0A1B0VMG8	Pseudomonas_phage	9.2e-125	31.8
WP_011062033.1\|5928741_5929053_+	hypothetical protein	NA	NA	NA	NA
WP_011062032.1\|5929109_5929448_+\|tail	phage tail protein	A0A1B0VMG7	Pseudomonas_phage	1.2e-32	56.2
WP_011062031.1\|5929444_5930638_+	hypothetical protein	A0A2H4PH88	Klebsiella_phage	7.0e-43	42.2
WP_011062030.1\|5930665_5931349_+\|tail	phage minor tail protein L	A0A2I6PIA7	Pseudomonas_phage	2.7e-87	66.5
WP_011062029.1\|5931351_5932116_+	NlpC/P60 family protein	A0A2I6PI52	Pseudomonas_phage	7.6e-83	54.9

DBSCAN-SWA_6

5935296 : 5943593

Pseudomonas_phage(57.14%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080512196.1\|5935296_5936271_+	hypothetical protein	B5WZU1	Pseudomonas_phage	1.2e-59	48.0
WP_011062023.1\|5936267_5937074_+	KilA-N domain-containing protein	A0A2H4IZE1	uncultured_Caudovirales_phage	6.7e-122	80.6
WP_011062022.1\|5937172_5937592_+	hypothetical protein	A0A1B0VMH3	Pseudomonas_phage	4.2e-43	61.9
WP_011062021.1\|5937644_5938226_+\|tail	tail assembly protein	A0A1B0VME1	Pseudomonas_phage	3.1e-44	53.2
WP_011062020.1\|5938283_5941373_+	host specificity protein J	Q3HQU5	Burkholderia_phage	8.5e-282	46.2
WP_085983366.1\|5942628_5943075_+	structural protein P5	A0A2H4J6R1	uncultured_Caudovirales_phage	1.4e-33	53.8
WP_011062017.1\|5943071_5943593_+	lysozyme	B5TK84	Pseudomonas_phage	7.5e-50	69.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP032352

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection