CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP042829	Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome	7 crisprs	cas3,csa3,cas2,cas1,cas8u1,csb2gr5,csb1gr7,cas4,Cas9_archaeal,DEDDh,cas6,csm5gr7,csm3gr7,csm2gr11,cas10,WYL	5	7	1	0

1. NZ_CP042829

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042829_1

• CRISPR_ID: NZ_CP042829_1
• CRISPR_location: 1012826-1018772
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 80 spacers
• Cas_protein_info: cas2,cas1,cas8u1,cas3,csb2gr5,csb1gr7

Consensus repeat of NZ_CP042829_1

Consensus_repeat	Method
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CRISPRCasFinder
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CRT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAA	PILER-CR
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	PILER-CR

spacers of NZ_CP042829_1

>1.1|1012862|37|NZ_CP042829|CRISPRCasFinder,CRT
GGACGCCCAGAAGGATTCGTGAACATGAACCATCAGT
>1.2|1012935|39|NZ_CP042829|CRISPRCasFinder,CRT
CTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
>1.3|1013010|36|NZ_CP042829|CRISPRCasFinder,CRT
CCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCA
>1.4|1013082|36|NZ_CP042829|CRISPRCasFinder,CRT
GGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGC
>1.5|1013154|41|NZ_CP042829|CRISPRCasFinder,CRT
ATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGG
>1.6|1013231|36|NZ_CP042829|CRISPRCasFinder,CRT
AACCAGCAGATTCGCTGGAATGATGCAGACAGCCAA
>1.7|1013303|36|NZ_CP042829|CRISPRCasFinder,CRT
TGGGTTGGTGATGAGGTTTTCGAGCAGATAGTCGCG
>1.8|1013375|39|NZ_CP042829|CRISPRCasFinder,CRT
GCGTCCTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCA
>1.9|1013450|38|NZ_CP042829|CRISPRCasFinder,CRT
TGCCGTTTGCAAATATCGCCCGCGTTGCCACGACTACG
>1.10|1013524|36|NZ_CP042829|CRISPRCasFinder,CRT
ACAGCTGACTGGCGGCTGGCTGCCCTCGGATGAGGG
>1.11|1013596|37|NZ_CP042829|CRISPRCasFinder,CRT
TCGTTTGGCGCCCCGCAGTTAACGGCAACGCCATCCA
>1.12|1013669|35|NZ_CP042829|CRISPRCasFinder,CRT
CTCGGCGAGCGGCGTTGGGCATACGCCCGGGCCGC
>1.13|1013740|39|NZ_CP042829|CRISPRCasFinder,CRT
GCCAGCCTTGAAGCCGACAGCACCGTTGGATGCAACCAT
>1.14|1013815|38|NZ_CP042829|CRISPRCasFinder,CRT
CGGTGGAAAACCCTGCGAGGAACGATGACGGCTCGCTG
>1.15|1013889|39|NZ_CP042829|CRISPRCasFinder,CRT
CTCACGATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGC
>1.16|1013964|37|NZ_CP042829|CRISPRCasFinder,CRT
TATATCCATGATTTTTTGCCGCAGAATAGACATTGTC
>1.17|1014037|38|NZ_CP042829|CRISPRCasFinder,CRT
GCGCCCTCGCTCGTGTCCCAGTGGGGTATTGCCATCTA
>1.18|1014111|38|NZ_CP042829|CRISPRCasFinder,CRT
CAACAACTCGGTCAACACCATCGACAACATCGACTGGG
>1.19|1014185|40|NZ_CP042829|CRISPRCasFinder,CRT
CATGGATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGC
>1.20|1014261|37|NZ_CP042829|CRISPRCasFinder,CRT
AAGGCCATTCACCACACGCTCCCGAGATACGTATCGC
>1.21|1014334|36|NZ_CP042829|CRISPRCasFinder,CRT
GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
>1.22|1014406|39|NZ_CP042829|CRISPRCasFinder,CRT
GGGCGCCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGG
>1.23|1014481|38|NZ_CP042829|CRISPRCasFinder,CRT
AGGAGGGACGTAGCGGCCACCCGGCGGACCTTGCCGGC
>1.24|1014555|36|NZ_CP042829|CRISPRCasFinder,CRT
CCGGAGATCGTGAACCAGCTTGCAAAGGTTATGCGC
>1.25|1014627|36|NZ_CP042829|CRISPRCasFinder,CRT
GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
>1.26|1014699|37|NZ_CP042829|CRISPRCasFinder,CRT
GCCCAAGGGCAGCTACGCGTATGTGATCTTCTTTTTT
>1.27|1014772|38|NZ_CP042829|CRISPRCasFinder,CRT
ACGGATGGCCCGCATCGATAGTCACGATTAGTCAGGAT
>1.28|1014846|37|NZ_CP042829|CRISPRCasFinder,CRT
TCCAGCTGCTTCCTGAGCTGCTCCGATAGACGGATGG
>1.29|1014919|42|NZ_CP042829|CRISPRCasFinder,CRT
CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
>1.30|1014997|42|NZ_CP042829|CRISPRCasFinder,CRT
CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
>1.31|1015075|36|NZ_CP042829|CRISPRCasFinder,CRT
CACGACGGCCACCTCGCCCTCCTCCGGCGCATTCCG
>1.32|1015147|38|NZ_CP042829|CRISPRCasFinder,CRT
TTGCCGTGCGGCAGGAGGAGACGATCACGCCGCGCGGC
>1.33|1015221|38|NZ_CP042829|CRISPRCasFinder,CRT
CATAGGGCATGCCACTGGGCCAACGGCGAGGGCGGCGA
>1.34|1015295|38|NZ_CP042829|CRISPRCasFinder,CRT
CAACCTAGCCACGATAAGGACGTATCGACTCCACCCTC
>1.35|1015369|38|NZ_CP042829|CRISPRCasFinder,CRT
ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
>1.36|1015443|39|NZ_CP042829|CRISPRCasFinder,CRT
GAACAGCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTC
>1.37|1015518|35|NZ_CP042829|CRISPRCasFinder,CRT
AGCATCTTGCCGGGCGGATTGAGCCCTCTCAATCG
>1.38|1015589|38|NZ_CP042829|CRISPRCasFinder,CRT
AGCATAGCGTCCCGGGACTGCCACGTGCCGGTGGCGAT
>1.39|1015663|38|NZ_CP042829|CRISPRCasFinder,CRT
AACAGCTGCGCCCACCTGAGGGAGGCTGGGGCTACGAC
>1.40|1015737|41|NZ_CP042829|CRISPRCasFinder,CRT
CGGCGGCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGC
>1.41|1015814|37|NZ_CP042829|CRISPRCasFinder,CRT
CTGTGCCGACCGGGTCGTCCAGCGCGGTCGCCGCGCT
>1.42|1015887|37|NZ_CP042829|CRISPRCasFinder,CRT
TCGGCGGCGGCGGGGACCAGGTGCGGCCGCGACGGCA
>1.43|1015960|40|NZ_CP042829|CRISPRCasFinder,CRT
GCACGCGCCGCGCCGCATACGCCGCCGCCACGCACGCGTG
>1.44|1016036|38|NZ_CP042829|CRISPRCasFinder,CRT
TCCGTGACGCATGCGCAGAAAGTGAGCGGTGGCGGAAC
>1.45|1016110|39|NZ_CP042829|CRISPRCasFinder,CRT
GCGCGCGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCC
>1.46|1016185|39|NZ_CP042829|CRISPRCasFinder,CRT
TCGAGAAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAG
>1.47|1016260|37|NZ_CP042829|CRISPRCasFinder,CRT
ACGATCTCGTCTTTGGCATTGCCCGCCCGCTTACCCT
>1.48|1016333|40|NZ_CP042829|CRISPRCasFinder,CRT
GAAGGGCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGAT
>1.49|1016409|38|NZ_CP042829|CRISPRCasFinder,CRT
GTGACGGGGCCTGAGGGCCAGACCAGCTGGCTCGACAA
>1.50|1016483|36|NZ_CP042829|CRISPRCasFinder,CRT
AGCCACGAGGTCATGGGCGATGTCCCGGTGAAGGTA
>1.51|1016555|39|NZ_CP042829|CRISPRCasFinder,CRT
GGCCCACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCA
>1.52|1016630|41|NZ_CP042829|CRISPRCasFinder,CRT
GCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTC
>1.53|1016707|38|NZ_CP042829|CRISPRCasFinder,CRT
ACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCG
>1.54|1016781|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCG
>1.55|1016855|37|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGT
>1.56|1016928|39|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATG
>1.57|1017003|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGG
>1.58|1017077|37|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATC
>1.59|1017150|40|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGC
>1.60|1017226|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
>1.61|1017300|36|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GTCACTGTACTTCGTCCCGAACCCGGGATTCCATGG
>1.62|1017372|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCT
>1.63|1017446|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAAC
>1.64|1017520|37|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CCTCGACCTCGAGACGCTGCTGACGACGCCGATACAC
>1.65|1017593|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CATCAGACATCCACCGGCGAGCGGCTGAACGTGACCAC
>1.66|1017667|35|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAA
>1.67|1017738|39|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAG
>1.68|1017813|35|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCT
>1.69|1017884|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
TCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGAT
>1.70|1017958|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACC
>1.71|1018032|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
TCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCAC
>1.72|1018106|40|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGC
>1.73|1018182|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGA
>1.74|1018256|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
ATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACT
>1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
CTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGT
>1.76|1018404|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTC
>1.77|1018478|37|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
TCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGT
>1.78|1018551|37|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
TCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGT
>1.79|1018624|39|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
GATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGC
>1.80|1018699|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR
TACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTG
>1.81|1012934|40|NZ_CP042829|PILER-CR
CCTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
>1.82|1013009|38|NZ_CP042829|PILER-CR
CACCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCA
>1.83|1013082|37|NZ_CP042829|PILER-CR
CGGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGC
>1.84|1013154|42|NZ_CP042829|PILER-CR
CATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGG
>1.85|1013231|42|NZ_CP042829|PILER-CR
CTCAACAACCAGCAGATTCGCTGGAATGATGCAGACAGCCAA
>1.86|1013308|37|NZ_CP042829|PILER-CR
CTGGGTTGGTGATGAGGTTTTCGAGCAGATAGTCGCG
>1.87|1013380|40|NZ_CP042829|PILER-CR
CGCGTCCTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCA
>1.88|1013455|39|NZ_CP042829|PILER-CR
CTGCCGTTTGCAAATATCGCCCGCGTTGCCACGACTACG
>1.89|1013529|37|NZ_CP042829|PILER-CR
CACAGCTGACTGGCGGCTGGCTGCCCTCGGATGAGGG
>1.90|1013601|38|NZ_CP042829|PILER-CR
CTCGTTTGGCGCCCCGCAGTTAACGGCAACGCCATCCA
>1.91|1013674|36|NZ_CP042829|PILER-CR
CCTCGGCGAGCGGCGTTGGGCATACGCCCGGGCCGC
>1.92|1013745|40|NZ_CP042829|PILER-CR
CGCCAGCCTTGAAGCCGACAGCACCGTTGGATGCAACCAT
>1.93|1013820|39|NZ_CP042829|PILER-CR
CCGGTGGAAAACCCTGCGAGGAACGATGACGGCTCGCTG
>1.94|1013894|40|NZ_CP042829|PILER-CR
TCTCACGATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGC
>1.95|1013969|38|NZ_CP042829|PILER-CR
CTATATCCATGATTTTTTGCCGCAGAATAGACATTGTC
>1.96|1014042|39|NZ_CP042829|PILER-CR
CGCGCCCTCGCTCGTGTCCCAGTGGGGTATTGCCATCTA
>1.97|1014116|39|NZ_CP042829|PILER-CR
CCAACAACTCGGTCAACACCATCGACAACATCGACTGGG
>1.98|1014190|41|NZ_CP042829|PILER-CR
CCATGGATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGC
>1.99|1014266|38|NZ_CP042829|PILER-CR
CAAGGCCATTCACCACACGCTCCCGAGATACGTATCGC
>1.100|1014339|37|NZ_CP042829|PILER-CR
CGTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
>1.101|1014411|40|NZ_CP042829|PILER-CR
CGGGCGCCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGG
>1.102|1014486|39|NZ_CP042829|PILER-CR
CAGGAGGGACGTAGCGGCCACCCGGCGGACCTTGCCGGC
>1.103|1014560|37|NZ_CP042829|PILER-CR
CCCGGAGATCGTGAACCAGCTTGCAAAGGTTATGCGC
>1.104|1014632|37|NZ_CP042829|PILER-CR
CGTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
>1.105|1014704|38|NZ_CP042829|PILER-CR
CGCCCAAGGGCAGCTACGCGTATGTGATCTTCTTTTTT
>1.106|1014777|39|NZ_CP042829|PILER-CR
CACGGATGGCCCGCATCGATAGTCACGATTAGTCAGGAT
>1.107|1014851|38|NZ_CP042829|PILER-CR
CTCCAGCTGCTTCCTGAGCTGCTCCGATAGACGGATGG
>1.108|1014924|43|NZ_CP042829|PILER-CR
CCGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
>1.109|1015002|43|NZ_CP042829|PILER-CR
CCGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
>1.110|1015080|37|NZ_CP042829|PILER-CR
CCACGACGGCCACCTCGCCCTCCTCCGGCGCATTCCG
>1.111|1015152|39|NZ_CP042829|PILER-CR
CTTGCCGTGCGGCAGGAGGAGACGATCACGCCGCGCGGC
>1.112|1015226|39|NZ_CP042829|PILER-CR
CCATAGGGCATGCCACTGGGCCAACGGCGAGGGCGGCGA
>1.113|1015300|39|NZ_CP042829|PILER-CR
CCAACCTAGCCACGATAAGGACGTATCGACTCCACCCTC
>1.114|1015374|39|NZ_CP042829|PILER-CR
CATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
>1.115|1015448|40|NZ_CP042829|PILER-CR
CGAACAGCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTC
>1.116|1015523|36|NZ_CP042829|PILER-CR
CAGCATCTTGCCGGGCGGATTGAGCCCTCTCAATCG
>1.117|1015594|39|NZ_CP042829|PILER-CR
CAGCATAGCGTCCCGGGACTGCCACGTGCCGGTGGCGAT
>1.118|1015668|39|NZ_CP042829|PILER-CR
CAACAGCTGCGCCCACCTGAGGGAGGCTGGGGCTACGAC
>1.119|1015742|42|NZ_CP042829|PILER-CR
CCGGCGGCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGC
>1.120|1015819|38|NZ_CP042829|PILER-CR
CCTGTGCCGACCGGGTCGTCCAGCGCGGTCGCCGCGCT
>1.121|1015892|38|NZ_CP042829|PILER-CR
CTCGGCGGCGGCGGGGACCAGGTGCGGCCGCGACGGCA
>1.122|1015965|41|NZ_CP042829|PILER-CR
CGCACGCGCCGCGCCGCATACGCCGCCGCCACGCACGCGTG
>1.123|1016041|39|NZ_CP042829|PILER-CR
CTCCGTGACGCATGCGCAGAAAGTGAGCGGTGGCGGAAC
>1.124|1016115|40|NZ_CP042829|PILER-CR
CGCGCGCGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCC
>1.125|1016190|40|NZ_CP042829|PILER-CR
CTCGAGAAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAG
>1.126|1016265|38|NZ_CP042829|PILER-CR
CACGATCTCGTCTTTGGCATTGCCCGCCCGCTTACCCT
>1.127|1016338|41|NZ_CP042829|PILER-CR
CGAAGGGCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGAT
>1.128|1016414|39|NZ_CP042829|PILER-CR
CGTGACGGGGCCTGAGGGCCAGACCAGCTGGCTCGACAA
>1.129|1016488|37|NZ_CP042829|PILER-CR
CAGCCACGAGGTCATGGGCGATGTCCCGGTGAAGGTA
>1.130|1016560|40|NZ_CP042829|PILER-CR
CGGCCCACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCA

CRISPR arrays and Neighbor proteins around NZ_CP042829_1

CRISPR arrays

The CRISPR arrays of NZ_CP042829_1

>merge|NZ_CP042829|1|1012826-1018772|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
CCCAAAATGAAGCCACCATCTCGAGATGTTGGAAACGGACGCCCAGAAGGATTCGTGAACATGAACCATCAGTCCCTCAATCAAGACACCATCTGGAGATGGTGGAAACCTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACGCCCTCAATGAAGCCACCATCTGGAGTGGTGGAAACACCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCACCCTCAATGAAGCGACCATCTGGAGATGGTGGAAACGGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGGCCCTCAATGAAACCACCATCTGGAGATGGTCTCAACAACCAGCAGATTCGCTGGAATGATGCAGACAGCCAACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAGCTGGGTTGGTGATGAGGTTTTCGAGCAGATAGTCGCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGTCCTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTGCCGTTTGCAAATATCGCCCGCGTTGCCACGACTACGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACAGCTGACTGGCGGCTGGCTGCCCTCGGATGAGGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCGTTTGGCGCCCCGCAGTTAACGGCAACGCCATCCACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCTCGGCGAGCGGCGTTGGGCATACGCCCGGGCCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCCAGCCTTGAAGCCGACAGCACCGTTGGATGCAACCATCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCGGTGGAAAACCCTGCGAGGAACGATGACGGCTCGCTGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAATCTCACGATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTATATCCATGATTTTTTGCCGCAGAATAGACATTGTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCCCTCGCTCGTGTCCCAGTGGGGTATTGCCATCTACCCTCAATGCAGCCACCATCTGGAGATGGTGGAAACCAACAACTCGGTCAACACCATCGACAACATCGACTGGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCATGGATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAAGGCCATTCACCACACGCTCCCGAGATACGTATCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGGGCGCCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAGGAGGGACGTAGCGGCCACCCGGCGGACCTTGCCGGCCCCTCAATGAAGCCACCATCTGGAGACGATGGAAACCCGGAGATCGTGAACCAGCTTGCAAAGGTTATGCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCCCAAGGGCAGCTACGCGTATGTGATCTTCTTTTTTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACGGATGGCCCGCATCGATAGTCACGATTAGTCAGGATCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCCAGCTGCTTCCTGAGCTGCTCCGATAGACGGATGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCACGACGGCCACCTCGCCCTCCTCCGGCGCATTCCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTTGCCGTGCGGCAGGAGGAGACGATCACGCCGCGCGGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCATAGGGCATGCCACTGGGCCAACGGCGAGGGCGGCGACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCAACCTAGCCACGATAAGGACGTATCGACTCCACCCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGAACAGCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAGCATCTTGCCGGGCGGATTGAGCCCTCTCAATCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAGCATAGCGTCCCGGGACTGCCACGTGCCGGTGGCGATCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAACAGCTGCGCCCACCTGAGGGAGGCTGGGGCTACGACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCGGCGGCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCTGTGCCGACCGGGTCGTCCAGCGCGGTCGCCGCGCTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCGGCGGCGGCGGGGACCAGGTGCGGCCGCGACGGCACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCACGCGCCGCGCCGCATACGCCGCCGCCACGCACGCGTGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCCGTGACGCATGCGCAGAAAGTGAGCGGTGGCGGAACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCGCGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCGAGAAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACGATCTCGTCTTTGGCATTGCCCGCCCGCTTACCCTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGAAGGGCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGATCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGTGACGGGGCCTGAGGGCCAGACCAGCTGGCTCGACAACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACAGCCACGAGGTCATGGGCGATGTCCCGGTGAAGGTACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGGCCCACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGTCACTGTACTTCGTCCCGAACCCGGGATTCCATGGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCCTCGACCTCGAGACGCTGCTGACGACGCCGATACACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCATCAGACATCCACCGGCGAGCGGCTGAACGTGACCACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGATCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCACCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGACCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACCTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGTCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACGATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACTACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC

>NZ_CP042829|1|1|1012826-1018772|CRISPRCasFinder
CCCAAAATGAAGCCACCATCTCGAGATGTTGGAAAC	GGACGCCCAGAAGGATTCGTGAACATGAACCATCAGT
CCCTCAATCAAGACACCATCTGGAGATGGTGGAAAC	CTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
CCCTCAATGAAGCCACCATCTGGAGTGGTGGAAACA	CCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCA
CCCTCAATGAAGCGACCATCTGGAGATGGTGGAAAC	GGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGG
CCCTCAATGAAACCACCATCTGGAGATGGTCTCAAC	AACCAGCAGATTCGCTGGAATGATGCAGACAGCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAGC	TGGGTTGGTGATGAGGTTTTCGAGCAGATAGTCGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGTCCTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TGCCGTTTGCAAATATCGCCCGCGTTGCCACGACTACG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACAGCTGACTGGCGGCTGGCTGCCCTCGGATGAGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGTTTGGCGCCCCGCAGTTAACGGCAACGCCATCCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGGCGAGCGGCGTTGGGCATACGCCCGGGCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCAGCCTTGAAGCCGACAGCACCGTTGGATGCAACCAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGGTGGAAAACCCTGCGAGGAACGATGACGGCTCGCTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAT	CTCACGATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TATATCCATGATTTTTTGCCGCAGAATAGACATTGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCCTCGCTCGTGTCCCAGTGGGGTATTGCCATCTA
CCCTCAATGCAGCCACCATCTGGAGATGGTGGAAAC	CAACAACTCGGTCAACACCATCGACAACATCGACTGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATGGATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AAGGCCATTCACCACACGCTCCCGAGATACGTATCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGGCGCCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGGAGGGACGTAGCGGCCACCCGGCGGACCTTGCCGGC
CCCTCAATGAAGCCACCATCTGGAGACGATGGAAAC	CCGGAGATCGTGAACCAGCTTGCAAAGGTTATGCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCCAAGGGCAGCTACGCGTATGTGATCTTCTTTTTT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACGGATGGCCCGCATCGATAGTCACGATTAGTCAGGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCAGCTGCTTCCTGAGCTGCTCCGATAGACGGATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CACGACGGCCACCTCGCCCTCCTCCGGCGCATTCCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TTGCCGTGCGGCAGGAGGAGACGATCACGCCGCGCGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATAGGGCATGCCACTGGGCCAACGGCGAGGGCGGCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAACCTAGCCACGATAAGGACGTATCGACTCCACCCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GAACAGCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCATCTTGCCGGGCGGATTGAGCCCTCTCAATCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCATAGCGTCCCGGGACTGCCACGTGCCGGTGGCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AACAGCTGCGCCCACCTGAGGGAGGCTGGGGCTACGAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGGCGGCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCCGACCGGGTCGTCCAGCGCGGTCGCCGCGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGGCGGCGGCGGGGACCAGGTGCGGCCGCGACGGCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCACGCGCCGCGCCGCATACGCCGCCGCCACGCACGCGTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCGTGACGCATGCGCAGAAAGTGAGCGGTGGCGGAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGAAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACGATCTCGTCTTTGGCATTGCCCGCCCGCTTACCCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GAAGGGCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTGACGGGGCCTGAGGGCCAGACCAGCTGGCTCGACAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCCACGAGGTCATGGGCGATGTCCCGGTGAAGGTA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCCACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCACTGTACTTCGTCCCGAACCCGGGATTCCATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCTCGACCTCGAGACGCTGCTGACGACGCCGATACAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATCAGACATCCACCGGCGAGCGGCTGAACGTGACCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC

>NZ_CP042829|1|1|1012826-1018772|CRT
CCCAAAATGAAGCCACCATCTCGAGATGTTGGAAAC	GGACGCCCAGAAGGATTCGTGAACATGAACCATCAGT
CCCTCAATCAAGACACCATCTGGAGATGGTGGAAAC	CTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
CCCTCAATGAAGCCACCATCTGGAGTGGTGGAAACA	CCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCA
CCCTCAATGAAGCGACCATCTGGAGATGGTGGAAAC	GGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGG
CCCTCAATGAAACCACCATCTGGAGATGGTCTCAAC	AACCAGCAGATTCGCTGGAATGATGCAGACAGCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAGC	TGGGTTGGTGATGAGGTTTTCGAGCAGATAGTCGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGTCCTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TGCCGTTTGCAAATATCGCCCGCGTTGCCACGACTACG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACAGCTGACTGGCGGCTGGCTGCCCTCGGATGAGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGTTTGGCGCCCCGCAGTTAACGGCAACGCCATCCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGGCGAGCGGCGTTGGGCATACGCCCGGGCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCAGCCTTGAAGCCGACAGCACCGTTGGATGCAACCAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGGTGGAAAACCCTGCGAGGAACGATGACGGCTCGCTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAT	CTCACGATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TATATCCATGATTTTTTGCCGCAGAATAGACATTGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCCTCGCTCGTGTCCCAGTGGGGTATTGCCATCTA
CCCTCAATGCAGCCACCATCTGGAGATGGTGGAAAC	CAACAACTCGGTCAACACCATCGACAACATCGACTGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATGGATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AAGGCCATTCACCACACGCTCCCGAGATACGTATCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGGCGCCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGGAGGGACGTAGCGGCCACCCGGCGGACCTTGCCGGC
CCCTCAATGAAGCCACCATCTGGAGACGATGGAAAC	CCGGAGATCGTGAACCAGCTTGCAAAGGTTATGCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCAGGCGCTGGAGGTAGCTGTACGGGTCGGCGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCCAAGGGCAGCTACGCGTATGTGATCTTCTTTTTT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACGGATGGCCCGCATCGATAGTCACGATTAGTCAGGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCAGCTGCTTCCTGAGCTGCTCCGATAGACGGATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGCCGGCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CACGACGGCCACCTCGCCCTCCTCCGGCGCATTCCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TTGCCGTGCGGCAGGAGGAGACGATCACGCCGCGCGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATAGGGCATGCCACTGGGCCAACGGCGAGGGCGGCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAACCTAGCCACGATAAGGACGTATCGACTCCACCCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GAACAGCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCATCTTGCCGGGCGGATTGAGCCCTCTCAATCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCATAGCGTCCCGGGACTGCCACGTGCCGGTGGCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AACAGCTGCGCCCACCTGAGGGAGGCTGGGGCTACGAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGGCGGCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCCGACCGGGTCGTCCAGCGCGGTCGCCGCGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGGCGGCGGCGGGGACCAGGTGCGGCCGCGACGGCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCACGCGCCGCGCCGCATACGCCGCCGCCACGCACGCGTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCGTGACGCATGCGCAGAAAGTGAGCGGTGGCGGAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGAAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACGATCTCGTCTTTGGCATTGCCCGCCCGCTTACCCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GAAGGGCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTGACGGGGCCTGAGGGCCAGACCAGCTGGCTCGACAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	AGCCACGAGGTCATGGGCGATGTCCCGGTGAAGGTA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCCACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCACTGTACTTCGTCCCGAACCCGGGATTCCATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCTCGACCTCGAGACGCTGCTGACGACGCCGATACAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATCAGACATCCACCGGCGAGCGGCTGAACGTGACCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC

>NZ_CP042829|1|1|1012899-1016628|PILER-CR
CCCTCAATCAAGACACCATCTGGAGATGGTGGAAA	CCTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
CCCTCAATGAAGCCACCATCTGGAGTGGTGGAAAC	ACCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCAC
CCTCAATGAAGCGACCATCTGGAGATGGTGGAAAC	GGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGCC
CCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGGC
CCTCAATGAAACCACCATCTGGAGATGGTCTCAAC	AACCAGCAGATTCGCTGGAATGATGCAGACAGCCAACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAGCTGGGT	TGGTGATGAGGTTTTCGAGCAGATAGTCGCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGTC	CTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTGCCG	TTTGCAAATATCGCCCGCGTTGCCACGACTACGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACAGC	TGACTGGCGGCTGGCTGCCCTCGGATGAGGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGTT	TGGCGCCCCGCAGTTAACGGCAACGCCATCCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCTCGG	CGAGCGGCGTTGGGCATACGCCCGGGCCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCCAG	CCTTGAAGCCGACAGCACCGTTGGATGCAACCATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGGTG	GAAAACCCTGCGAGGAACGATGACGGCTCGCTGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAATCTCAC	GATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTATAT	CCATGATTTTTTGCCGCAGAATAGACATTGTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCC	CTCGCTCGTGTCCCAGTGGGGTATTGCCATCTACCCTCA
ATGCAGCCACCATCTGGAGATGGTGGAAACCAACA	ACTCGGTCAACACCATCGACAACATCGACTGGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCATGG	ATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAAGGC	CATTCACCACACGCTCCCGAGATACGTATCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTCAG	GCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGGGCG	CCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGGAG	GGACGTAGCGGCCACCCGGCGGACCTTGCCGGCCCCTCA
ATGAAGCCACCATCTGGAGACGATGGAAACCCGGA	GATCGTGAACCAGCTTGCAAAGGTTATGCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTCAG	GCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCCCA	AGGGCAGCTACGCGTATGTGATCTTCTTTTTTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACGGA	TGGCCCGCATCGATAGTCACGATTAGTCAGGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCCAG	CTGCTTCCTGAGCTGCTCCGATAGACGGATGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGCCG	GCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGCCG	GCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCACGA	CGGCCACCTCGCCCTCCTCCGGCGCATTCCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTTGCC	GTGCGGCAGGAGGAGACGATCACGCCGCGCGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCATAG	GGCATGCCACTGGGCCAACGGCGAGGGCGGCGACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCAACC	TAGCCACGATAAGGACGTATCGACTCCACCCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACATGGT	GAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGAACA	GCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCAT	CTTGCCGGGCGGATTGAGCCCTCTCAATCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCAT	AGCGTCCCGGGACTGCCACGTGCCGGTGGCGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAACAG	CTGCGCCCACCTGAGGGAGGCTGGGGCTACGACCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGGCG	GCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCTGTG	CCGACCGGGTCGTCCAGCGCGGTCGCCGCGCTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGGC	GGCGGCGGGGACCAGGTGCGGCCGCGACGGCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCACG	CGCCGCGCCGCATACGCCGCCGCCACGCACGCGTGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCCGT	GACGCATGCGCAGAAAGTGAGCGGTGGCGGAACCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCG	CGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGAG	AAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACGAT	CTCGTCTTTGGCATTGCCCGCCCGCTTACCCTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGAAGG	GCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTGAC	GGGGCCTGAGGGCCAGACCAGCTGGCTCGACAACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCCA	CGAGGTCATGGGCGATGTCCCGGTGAAGGTACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGGCCC	ACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCACTGTACTTCGTCCCGAACCCGGGATTCCATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCTCGACCTCGAGACGCTGCTGACGACGCCGATACAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATCAGACATCCACCGGCGAGCGGCTGAACGTGACCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTG


>NZ_CP042829|1|2|1016745-1018772|PILER-CR
	CCTCGGGAGTGTGGACCCACCTGCGCTGATCCTCAGAACG
CCCTCAATGAAGCCACCATCTGGAGTGGTGGAAAC	ACCGCGCGACCGAATCGCTCGACGACGTGCAGGAGCAC
CCTCAATGAAGCGACCATCTGGAGATGGTGGAAAC	GGGCACAGCCAACGCAAGCGTTTTCAATCTCGTCGCC
CCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATACTCCCCCCCTTGGGTCGCCTCGACCCCCCATCCCGGGGC
CCTCAATGAAACCACCATCTGGAGATGGTCTCAAC	AACCAGCAGATTCGCTGGAATGATGCAGACAGCCAACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAGCTGGGT	TGGTGATGAGGTTTTCGAGCAGATAGTCGCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGTC	CTTGAACGGCGTGAGCCCGGCGAGCGCGTCGTCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTGCCG	TTTGCAAATATCGCCCGCGTTGCCACGACTACGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACAGC	TGACTGGCGGCTGGCTGCCCTCGGATGAGGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGTT	TGGCGCCCCGCAGTTAACGGCAACGCCATCCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCTCGG	CGAGCGGCGTTGGGCATACGCCCGGGCCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCCAG	CCTTGAAGCCGACAGCACCGTTGGATGCAACCATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGGTG	GAAAACCCTGCGAGGAACGATGACGGCTCGCTGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAATCTCAC	GATGGTGCCGGACCTCTTCCGGAAGGCCGGCGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTATAT	CCATGATTTTTTGCCGCAGAATAGACATTGTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCC	CTCGCTCGTGTCCCAGTGGGGTATTGCCATCTACCCTCA
ATGCAGCCACCATCTGGAGATGGTGGAAACCAACA	ACTCGGTCAACACCATCGACAACATCGACTGGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCATGG	ATCTGCCCGACGTGGATTGCGCTCGGCCACCAGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAAGGC	CATTCACCACACGCTCCCGAGATACGTATCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTCAG	GCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGGGCG	CCCGCGGGAATCGGCCCCGGGCGAAACCCCGAGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGGAG	GGACGTAGCGGCCACCCGGCGGACCTTGCCGGCCCCTCA
ATGAAGCCACCATCTGGAGACGATGGAAACCCGGA	GATCGTGAACCAGCTTGCAAAGGTTATGCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTCAG	GCGCTGGAGGTAGCTGTACGGGTCGGCGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCCCA	AGGGCAGCTACGCGTATGTGATCTTCTTTTTTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACGGA	TGGCCCGCATCGATAGTCACGATTAGTCAGGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCCAG	CTGCTTCCTGAGCTGCTCCGATAGACGGATGGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGCCG	GCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGCCG	GCGTGCGGCCTGCGGGGACTGCCGCGCAGAGACAGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCACGA	CGGCCACCTCGCCCTCCTCCGGCGCATTCCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTTGCC	GTGCGGCAGGAGGAGACGATCACGCCGCGCGGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCATAG	GGCATGCCACTGGGCCAACGGCGAGGGCGGCGACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCAACC	TAGCCACGATAAGGACGTATCGACTCCACCCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACATGGT	GAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGAACA	GCTCCTCGTTCGAGATCGCGAGCGAGCCGTAGTCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCAT	CTTGCCGGGCGGATTGAGCCCTCTCAATCGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCAT	AGCGTCCCGGGACTGCCACGTGCCGGTGGCGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAACAG	CTGCGCCCACCTGAGGGAGGCTGGGGCTACGACCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCGGCG	GCTCGTGACAATGACTACGGGCCGCGGCTCCGGCGCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACCTGTG	CCGACCGGGTCGTCCAGCGCGGTCGCCGCGCTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGGC	GGCGGCGGGGACCAGGTGCGGCCGCGACGGCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCACG	CGCCGCGCCGCATACGCCGCCGCCACGCACGCGTGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCCGT	GACGCATGCGCAGAAAGTGAGCGGTGGCGGAACCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCG	CGGGTCAGCCGCGCGCGCGGCATCGGCCGATGCCCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACTCGAG	AAGTGCAGCTGTGGAGCCCGGCGGCGCGTTGAAGCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACACGAT	CTCGTCTTTGGCATTGCCCGCCCGCTTACCCTCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGAAGG	GCCCGCCGCGCGTCTTTCTTGCCGGTGGCCACGATCCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGTGAC	GGGGCCTGAGGGCCAGACCAGCTGGCTCGACAACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACAGCCA	CGAGGTCATGGGCGATGTCCCGGTGAAGGTACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGGCCC	ACCCCGCGTCGCGGAGTGTCTCGACGAGCCACCACCCTCA
ATGAAGCCACCATCTGGAGATGGTGGAAACGCGCAGGTTCGGCGGGCGTGACGCCCGCCTTGAAGGCGGTCCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAACACCCCGAGTTCGCCGAACTGGTCGACGCGGCGGCGTCGCCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCGCGCGAGGCGACTGTTGCGGCTGCTGCGGGAGCG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCGGCAGTCCCCGGCGAACAGGCAGGGTCAGCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCAGGAGTCCAGCGATGCTGATCACTGGCACCTTTGATG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCACCTCGCTCGTCCGAGGCGTCGGTGGTTCGGGGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GGCCGGGCCCGTGCTAGCTGGCGCTGGCCGTCCTATC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCGCCATCTCCGCGGCCCTGATCTATCAGGCCCGGGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGTGAACTCCCAGCCGTTGTAGCGGGTGGAGAGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GTCACTGTACTTCGTCCCGAACCCGGGATTCCATGG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CAGCAGCTCCTCGCGGCGCAGGAGGCGGGCCGCCAGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GACAGGCGGCCACCCGGAGCCTTCACCTCGACCGCAAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCTCGACCTCGAGACGCTGCTGACGACGCCGATACAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CATCAGACATCCACCGGCGAGCGGCTGAACGTGACCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTCGAGTTCCCGGCAACACTCCGCCGGGAGCCCAA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGCTCGACCATCCCCCGCCGCGCGAGCTGACCGAGCAG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CCGGCAGCGGGGTAGCTGCCGTCGCGGATGCTGCT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGAGGATGCCGCCGATGAGGCCGCGGATGATGTCGAT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCCGAGGCGCGCAGCCCCGTGATGCGCCAGCGCGGACC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCCATCGCGCCGAGGATGCCCTCCTTGAGCGTGGGCAC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CGACGCCGACCGCCAGGAGGTCACCGTCACCCTCGTCCGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGAGGACCTCCATCGCCTGCGTCACCTCGCCCGCCGA
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	ATGGCGTACACGTCGGCGCCGGAGTTGACGATGATACT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	CTGTGCTGGCGTTACCGCCGCCGCCGCCGCCGCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GCGCCGGCAACCGAGGCGACGATGTTCAACTGACGCTC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCATGGTGCCGATGATGGCAGGGGTTGCGCGCCATGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TCGACGGAAGGACGTTCCAGGCGCGGATTGTCCAGGT
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	GATTTGCCAGAGGCCGAAGCTTGTGCGGTCGTTGCACGC
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC	TACTTGGAGTTCGTTCTCCGCCTGCAGGAGCCCAACTG
CCCTCAATGAAGCCACCATCTGGAGATGGTGGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158066632.1|1002078_1004235_+|RecQ-family-ATP-dependent-DNA-helicase	unknown	unknown	gnl|CDD|223588
NZ_CP042829.1|WP_158066635.1|1006704_1007127_-|PilZ-domain-containing-protein	unknown	unknown	gnl|CDD|377796
NZ_CP042829.1|WP_158066634.1|1004983_1005883_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP042829.1|WP_158066631.1|1001230_1002004_-|type-III-pantothenate-kinase	unknown	unknown	gnl|CDD|237347
NZ_CP042829.1|WP_158066639.1|1022099_1025105_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_CP042829.1|WP_158066633.1|1004399_1004933_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066641.1|1026587_1027769_-|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl|CDD|378223
NZ_CP042829.1|WP_158066643.1|1029133_1029613_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066640.1|1025097_1026585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_CP042829.1|WP_158066628.1|998456_999071_-|N-acetyltransferase	unknown	unknown	gnl|CDD|224168
NZ_CP042829.1|WP_158066637.1|1019033_1019327_-|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl|CDD|187856
NZ_CP042829.1|WP_158068250.1|1019337_1020951_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_CP042829.1|WP_158066629.1|999050_999986_+|TVP38/TMEM64-family-protein	unknown	unknown	gnl|CDD|223475
NZ_CP042829.1|WP_158066644.1|1029773_1030145_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066638.1|1021093_1022107_-|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown
NZ_CP042829.1|WP_158066630.1|999969_1001214_-|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl|CDD|235513
NZ_CP042829.1|WP_158066645.1|1030531_1033510_-|DUF1998-domain-containing-protein	unknown	unknown	gnl|CDD|378167
NZ_CP042829.1|WP_158066642.1|1027942_1028542_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158068249.1|1005949_1006690_+|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl|CDD|234595
NZ_CP042829.1|WP_158066636.1|1007173_1008745_-|fatty-acid--CoA-ligase	unknown	unknown	gnl|CDD|235730

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042829.1|WP_158066637.1|1019033_1019327_-|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	1.9e-22	74.2	0.1
NZ_CP042829.1|WP_158066639.1|1022099_1025105_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	4.2e-128	423.1	0.2
NZ_CP042829.1|WP_158066640.1|1025097_1026585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	2.3e-68	226.0	16.5
NZ_CP042829.1|WP_158068250.1|1019337_1020951_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	5.7e-97	319.3	0.0
NZ_CP042829.1|WP_158066638.1|1021093_1022107_-|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	3.6e-29	96.8	0.3
NZ_CP042829.1|WP_158066641.1|1026587_1027769_-|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	2e-30	100.8	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158066632.1|1002078_1004235_+|RecQ-family-ATP-dependent-DNA-helicase	gnl|CDD|223588	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair].	0
NZ_CP042829.1|WP_158066635.1|1006704_1007127_-|PilZ-domain-containing-protein	gnl|CDD|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	1.12415e-08
NZ_CP042829.1|WP_158066634.1|1004983_1005883_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.76962e-20
NZ_CP042829.1|WP_158066631.1|1001230_1002004_-|type-III-pantothenate-kinase	gnl|CDD|237347	PRK13318, PRK13318, type III pantothenate kinase.	4.17839e-134
NZ_CP042829.1|WP_158066639.1|1022099_1025105_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	5.70545e-111
NZ_CP042829.1|WP_158068249.1|1005949_1006690_+|4-hydroxy-tetrahydrodipicolinate-reductase	gnl|CDD|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	2.32576e-77
NZ_CP042829.1|WP_158066641.1|1026587_1027769_-|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.00582e-35
NZ_CP042829.1|WP_158066640.1|1025097_1026585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.07036e-52
NZ_CP042829.1|WP_158066628.1|998456_999071_-|N-acetyltransferase	gnl|CDD|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	8.63811e-60
NZ_CP042829.1|WP_158066637.1|1019033_1019327_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.59406e-20
NZ_CP042829.1|WP_158068250.1|1019337_1020951_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.65917e-106
NZ_CP042829.1|WP_158066629.1|999050_999986_+|TVP38/TMEM64-family-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.61249e-29
NZ_CP042829.1|WP_158066630.1|999969_1001214_-|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl|CDD|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_CP042829.1|WP_158066645.1|1030531_1033510_-|DUF1998-domain-containing-protein	gnl|CDD|378167	pfam09369, DUF1998, Domain of unknown function (DUF1998). This family of proteins are functionally uncharacterized. They are mainly found in helicase proteins so could be RNA binding. This family includes a probable zinc binding motif at its C-terminus.	1.17153e-12
NZ_CP042829.1|WP_158066636.1|1007173_1008745_-|fatty-acid--CoA-ligase	gnl|CDD|235730	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated.	0

Protein sequences

>NZ_CP042829.1|WP_158066636.1|1007173_1008745_-|fatty-acid--CoA-ligase
MTTDIDIACLADITRTHAAARPNAVALVYQGRETTYRELDERASRVANGLIAAGLGPQARVAYLDKNSDRFFEVLFGAAKANQVMVAVNWRLAPPEVAYIINDAMAEALFVGQEFFPVIEKILPELRTVKTVIAIDAPHEGWQYYPEWRDARSAEDPRVPTGEDDVAIQMYTSGTTGHPKGAQLTNGNFFALLPGAVRSWGPRWSDNDVNLVVMPLFHIAGSGWGIVGLYAGAKDIVLRDVVPAEILKVIPEYRVTRAIFVPAVLLFLLQTPGVQETDFSSLQFIAYGASPIPLDLLRNAVATFKCQFAQLYGLTETTGAVTYLPPEDHDPNGNPRMRSCGKPLPGVELRIVDPEGRDLPVGEVGEIICRSKQVMKGYWNLPEETAKAIRDGWFYTGDAGYMDADGYVYIYDRVKDMIVSGGENVYPAEVESALFGHPAVADVAVIGVPDDKWGEAVKAIVVKKPGMEVTPEELIAFARERIAGYKVPKSIDFAEALPRNPSGKILKRELRAPYWAGRERQVN
>NZ_CP042829.1|WP_158066635.1|1006704_1007127_-|PilZ-domain-containing-protein
METFNGVASRRRAPRVPADLPCRLLAGGSVIADGALIDISIAGAAVTVRQPVPATETVVLRLETPGGEWHAEIPARLVTVDPDPFGGLIVRLRFERDPEAARALAPLVSALRRRFTARQADLAGERLGPYGRAYAGRRGA
>NZ_CP042829.1|WP_158068249.1|1005949_1006690_+|4-hydroxy-tetrahydrodipicolinate-reductase
MGRQVAAAVLAEPGMTPAAYIDGLAERGAMDGIPVFREAGVGLDEAKPHVVVDFTNAAWTPVIAKAALERGIPLVIGTTGLSADFMAWLEAETKARGVGAVVAANFAISAVLMMHFAKLAAQFFDHAEIIELHHDGKADSPSGTAKATAEGMVAARGRPFVHPEPEVETVAGARGAELGGVAIHAVRLPGLVAHQEVIFGGQGQLLTIRQDSTGRDSFMPGVLLAIREVLGRRELVVGLDRLLGLA
>NZ_CP042829.1|WP_158066634.1|1004983_1005883_+|alpha/beta-hydrolase
MNEGMRTDAPRAFRVPGDGVELQAYEWAGEEPAVFFAHATGFHARCWDQVIRRLPGVRAIAVDMRGHGLSDKPEPPYRWSHFGRDVAAAVRALGLRGALAVGHSKGGHAVTRAAALEPGAFGALLLVDPVIGPRGFRREMGEDEHFAARRRNAWSSPEEMFERFRGREPFSRWDPEVLRDYCTYGLVPNPEGEGCVLACPPRIEAAVYAGAYSDPEGDDVYDALARVTVPVRVLRARQRAADAPMDMSGSPTAPDLARHFARGEDVPVPQYSHFIPMEDPGFVAGQVREMLALLTGAAK
>NZ_CP042829.1|WP_158066633.1|1004399_1004933_-|hypothetical-protein
MTLPQPLSEALAVLASTPTTLAHLVAEADDARLDDADREGWTPRLWLAWFRDEEVLALRPGLERMLAEPEPVLHVLDRAAWPAGRHRTRDRKEHILADFALHRQATLAIVRALEPRQLERRGLLAGEPVTVAAYLERWAAHDLARVRRLEAALGETLADVLERRRRMVEEYRRAEQG
>NZ_CP042829.1|WP_158066632.1|1002078_1004235_+|RecQ-family-ATP-dependent-DNA-helicase
MEGEGSRERGAGSRERGAGSGEQGGFRTGVLYWGAVPGELLRRARAVLRDVFGYGSFRPGQEAVIADVLAGRDTLVVMPTGGGKSICYQVPALVLERGLTLVVSPLLALMKDQVDALRAMGVPAAAITSMQEPEEQRAVLAACAQGRVRLLYVAPERFQSGAFLAALRGLEVARLAVDEAHCISQWGHDFRPSYRDLGALRERLGFPPTVALTATADPLVQQDITERLRLREPAVHVAGFDRPNLRLETLRVSSLGEKAEAVAEELAGLRGASAIVYCATRRRTEDLAAELQRRGIRCATYHAGMADTDRRRVQDAFARDAVRVIVATNAFGMGIDKPDVRLVVHHDLPDSLESYYQEAGRAGRDGDPARCLLISSPRDRGLREYFIDMAHPSAERVLEIYRALAAAEGRRVHVRDLMREDDEPGFNAAVQTLVESGVAVKQGWMLAATRPDGEALIDTAMLEAHREHSFRKLDAMEAYAQSRTCLRARVLEYFGETPPAACGNCGPCLAGERGREAEGRPAAEEALFQELRAIRRALAEAEGVPPYIVASDAVLREMARRRPRNRAEMLAVPGMGRVKFERYGEQFLSATRAAAGAAGPRPAAPGRLARPAVREAATFAPTVRETLSLYADGLRDIGEMAKVRAMAPATIVSHLAELIAAGAIPSLEGLVAPEKVELVRAAAGGQPIRSLRPLKERLGDAVSYDELHLVRAWLSRRK
>NZ_CP042829.1|WP_158066631.1|1001230_1002004_-|type-III-pantothenate-kinase
MLLAFDIGNTSIHIGLWDGETLVDTWRIGVEREKLPDEYGVLILSLLDYSDIDARAITACIIGCDVPPLIPTFEQVCRKYFRVEPLLVGHGLRTGVRILYDNPRQLGADRIIDAVAASRLYGTPVIVVDFGTATVFDAVNEQGDYLGGAIAPGIGIASEALFSRAAMLYRVQLERPPAAIGKNTVHAMQSGILFGYVGLVEGLVARFKRELGGNPPVVATGGLASLVASETDCIDIVNGDLTLIGLRLIYELNRDRD
>NZ_CP042829.1|WP_158066630.1|999969_1001214_-|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MSDFTPRELPLQGRHIVLGVTGSISCYKAADLASKLRQAGAAVEVVMTPAATQFIAPLTFKSLTGRDVIVEMFAAAETEAHVEVARRAHAMVIAPATADCLASLAHGFAGDMVALTALATAAPILVAPAMDSQMWEHPATQDNVATLRERGVEVIGPMIGRLASGRTGPGRLAEVPEILGALRQLLGQRTGDLSGRRIVVSAGGTHEPIDPVRFVGNRSTGKMGFAIAEAARDRGAFVTLVAGPVALDTPWGVHRVDVQTVREMLIALEQAAADSDAIIMAAAPADFRPASPADHKIKKAPGQERLVIELEQNPDIIASIPGGGIRVGFAAETRNLAEYARQKLPAKRLHFIVANDVSAPGSGFGTETNQVVIFHDDGRVEEFPLLSKYAVAHLILDRVLERLEARGGAATPPA
>NZ_CP042829.1|WP_158066629.1|999050_999986_+|TVP38/TMEM64-family-protein
MTGVAYHCARMRDGIIGVLALALGAAVTLLGLEYLHSRSVSVGLGVVVAYVVWGELMDLFGSSRNDAPLPPGTPLLMDPKFRRRVLGVLAMGGASGVILLGLLTGDIDVEKVREWIRDLGAWGPVLLILVLAVAMIIAPIPNPPFMIAAGIAWGTFLGVVYAVIGQLLGSVVIFGISRKFGRRFIPKLIGEEGAEKVDRLAKEMGPHLVFWWRMMPVSFDFAAYAAGLTGMSFRLFTTLVFLGSIVPTTVVVAFGDSFGKSVEAQLVSGALILVALAVPSTIFFVRYRRQLPPPREWLGRMLSTGDPTPGA
>NZ_CP042829.1|WP_158066628.1|998456_999071_-|N-acetyltransferase
MVRHACHRTMNAPRNPFEICTGYPSRVSELSIRPAAEADLETINRIYNHEILHGTATWDTEPWSMERRRTWWAGHSDPLQPVLVAETGAGVVGFAYLTLVSQKPGWRFTREDTIYLDPAARGRGIGRLLLAALLEEARRIGVRTVVASITSTNTASIRLHEAFGFTCVGTLRNAGHKFGAWLDTCYYQLDLGEPPPGAPAWTAT
>NZ_CP042829.1|WP_158066637.1|1019033_1019327_-|CRISPR-associated-endonuclease-Cas2
MERRRYLVAYDITNDRRLREVYREMLGWGTRLQYSVYLCDLTRPELIKLRRKLLELIDRDDDSVAIFDLGVPASSRAVVPEILGRPPTLPRQGPAIY
>NZ_CP042829.1|WP_158068250.1|1019337_1020951_-|CRISPR-associated-endonuclease-Cas1
MVNEFVYCPRLFYLEWVRGLWADNDDTAEGTDLHRRVDTPAGTAPEPGPGVRQVARAFELSSETLGVTAKIDLVEFLDDAARPVDYKRGRPAPTPARVWEPEQVQLAIQALLLREAGYQCREGVIYFAETGERVTVPITPELEQQTLAAIARARETAGQPDAPPPLVDSPKCPACALVGYCMPDELNLLLHRRTARPRTLITREPAARPLYLIGYGTQLRKDGNHFIVAPRDGEPTRIRPIDISHVAAFGTVTISTSALHALLAQETPIAWLTRGGRFLGLTSGLMGKNIQLRRRQFTLTEPEALELARTFVIAKIRNQRTLLRRNSRFEIGRTLEGLADAVARARLAPDSDTLRGIEGYAARLYFNAFPAMLRRDLPFTPGDLFRGRNRRPPRDPVNALLSFAYTLLTKDLTVQAQLIGFDPYWGFYHRPKFGRPALALDLAEEFRPLIADSVVITALNNGEITSAHVRRIGAGYTLTDDGRRTFLRVYERRLEQEITHPRFRYRLSYRRLLDLQPRFLAAVLLGELPAYQGFETR
>NZ_CP042829.1|WP_158066638.1|1021093_1022107_-|hypothetical-protein
MPEIPAPALRGNDPLGFLAALGVLALAEQGEIQPVRLRWEGGTAPHAVFVSDAYTGTRDLADALREVARRLLNADAAIPGCPPEFPYRNRHPADTAKGADPMRMSREAARATCEDAARRWESGERWFARWVAALVAPYTLDKDGPEGRIRLTPFNAPFGQMKFRDSYYDQACRYVAATPGMPEDAFVGWIRLEGYTGANLDARAIREAQVSTAGVPSNAGAPSPTWLAVMAIRFFPLADDGRLRTAGWQEVQLYSGATRRSLVWPVWRPPLNAPSVRVLLNHPDLAVQVPNRGTPRVAGGARLRALGITGVYGSSRRTRTQGDGPLGPAVLLWPAPR
>NZ_CP042829.1|WP_158066639.1|1022099_1025105_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MLEPAAFPAFFREVTGREPFPWQVRLAERLCGGEVPDLVDVPTGLGKTSVIIAWAFALAASLEDRGPAARTLPLRLIYVVDRRVIVDSSYELARQLVERLDPAAPAGPVAARVAAALQGLAGADARPLEAVRMRGGVTWDARWLDRPHQPAVVVSTVDQFGSRLLFRGYGVTPSMAPINAALCGLDAWVVVDEAHIAEPLAETLDRVRRLQRASAEAALPHLRHTLMSATARTAGSANDRLTATLETETAAVSPAAQVAQRRLTVPKPTELEEVNVRGKGVERYRALGAELAQRLAGFAEAPGRYAVLCNTVQAARAAFEHLEKRRPGAAWLLTGRVREFERERLVPAILDQFRSGSPPPGAALSLVATQTVEVGADLDFDAIVTECAPLASLVQRFGRVRRMGNPHEAVSRIVYCPQTHDEDPIYGRATQTTWKFLEQASPGASLDFSYRGVLQLRRQAPPDADVDPTFTPVLLGAHVERWAQTSPLPAVDQPVAPFLHGFQRGGAPQVYVAWRAFPRDVDPQDWAGWLDLAPVSDWETVAVPLAEARAFLAGTPSESIDADIESAASEQAGAEDRSNGRVARAVLYAGPDEPPAPVQSPSTLQPNATIIVDSFEGGHDRWGWTGRRSDPAAPRPVPDVADLAPSRRRRSLRLAPSIALSHATEPEAEARILDAWARLDPEDLDGTLPAICEAFASLVPEPLAGLYRDAAEGIRQRRWDAYLPEREPETGRWRVAEAGRPVVRLVEQREVSATSADRSDDDALSTSLSAGTPVPLIDHSTRVGDLARDFAERLGLAPDLVRAVELAGRFHDIGKAEPRFQAALYDGDALAALAGTPRAKSGRDPRDPVARNAHRLAQLPPGFRHEAVSARLVRALARARPDLFDGVDLDLVHYLVVAHHGRGRPLLPPIDDANAPETTLDIEGVTVSVPGERYQVDWEHPARFEQLNDRYGWWGLALLETIVRLADMKDSELAAARGSGADAGEVPPLSASPLPPGGSHA
>NZ_CP042829.1|WP_158066640.1|1025097_1026585_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MLAIRCQLLGETFEGGAPEDPGAAEWPPSWMRLFSALVAVADHTDPPEVELLEKLEQLQPPAIVADPPALADAPEMAFERQAWVPINKTAKKVEEAKSTSLPGRLANGARGWARFVPRSPDILYSWEDDPLTDAERALLASLCRRVPYLGRSTSPVIVEVVDAGVLEEGVLVPASSREEDPESTDLPTYPVRVPFSGALAALRDAHERKNAGKPGDPWAVGAYVDYRPRVRRSHPPTIRGPFRELVIFALGGPQRDGRHAVEFTDLLRKAVMANLPRPLPAVHGHGPSESPRCAFLALPFVGHPHADGHIIGLAVAVPELEPADLRDLWWALGATAERGLSSPVLGQFTLQRLAPVEQRRAPLALQAWRWTRPSDTWVTAYPAVLDRFVKDRTEIPALIRQTILNSGLPEPVEITSALRPFSGTLPGALDLHPRETTRPGHREGFRPYRHLYLRFAAPVRGPVVIGSMRHYGLGLCVPVTSPATSAAREAEPRDA
>NZ_CP042829.1|WP_158066641.1|1026587_1027769_-|type-I-U-CRISPR-associated-protein-Cas7
MAVHMADLDALYERLAAAVTLQSDDAAIRIRAEYEPQAGPGAKVFPPTYMESNGTRYHFERRWSPEGTPVEVVVLDSYQSQANRCEAALDRVADRLRLPRILWRFELDGNVLELSNLSVPHRSRDAYIIHGIVGGKKFGETEVGKALNDATDSSLDAYLAFSPTDLIYGFWDSWQGKRTQLRIARSYTSEMIGWQPERGRRAAIKIDPLVLPAEYEVNRSDWQGIGESKKSKSQVTTLSNLGYGTNPKAGTPQDEFGGVAVRSISRLGVLSLTGLARLRFRDEAVNRAGRTALAALALAGDRLAFGGAGIHLRSGSDLVLRNESLEWVQRGARTEPLELSRDDAVQLVDLARERLAAAGVAWQAEPVVVSPSGPLAEVIRNVLTARGLDDAEG
>NZ_CP042829.1|WP_158066642.1|1027942_1028542_-|hypothetical-protein
MTNPISGAGPLRRAWETTDLPRNHPPHDYVTHIETGELVLIWPCGQHYAVGPNQRPRRRFHRLRAALELQYARWFGRVPGKSARLQLPTTCTACQVLGADDLFTWTRLFNLMPEEHLVPIALQYAAQVDDDFRRALEEGGTKFIPLPRRGPLAIASLTRNARYAGMHDGTFYLIHFDPTPYGPELMERMLADLETGAFN
>NZ_CP042829.1|WP_158066643.1|1029133_1029613_-|hypothetical-protein
MDAEFLEFISRPVQWPRDAPLLGGVYSPTVAFTDTEGIVPSTYIGSSVPVTLPHLFASVLSGGKPIPELRAPPGGYTLFEARKPFRKVRFRYYEWDQGGFTFREPVAIPGGCVLLGVEYMPVEHYRPRTLKYLVVDEKATKNWIDAIREALRRASDRKG
>NZ_CP042829.1|WP_158066644.1|1029773_1030145_-|hypothetical-protein
MTVNEGGLWFAVRALERAARGAVAYTAEPFIEVDDQNRLTAAGIRFRVPDYDAVYTLTLRYPAGTCATDITVEVRGGYPAPTWYEHRPGTQPGEPWFPQPSSGCIPWVERMQATAALSGKRDF
>NZ_CP042829.1|WP_158066645.1|1030531_1033510_-|DUF1998-domain-containing-protein
MTVAARTESGAVRCVNCKAPSSQRGPRRLSLGSDAPPAVIASALFDALPRGEERPRFLAFSDSRQDAAFFAAYLERTYNRTARRRVIYQVLRETWETPGGEGLRLESLGSRLASAMDRAGFFTSDTSALRRKDLAVEWLIAELTAMDERQSLAGVGLAELRLARPGTWTPPRPLLSPPWSLTPEEAWVLLEELLKTLLAAQVVSMPQGVDVSSEIFEPRNKRYAVRQDGPARTAELEILSWVPQHPAINRRLDYLVRIHQAKNPTASVGESKTTARALLQDIWRYLSDQDSPFRSILQPSNEPNHGIVYRLNPNSWEFRPPRALLQCSSCGTIEPAAVAGVCPSFRCSGRLEPASELPLDHYRAMYQEPPLGPMYAEEHTAQWSTQKASEIQGDFVSKNGRVNVLSCSTTFELGVDVGELEVVLLRNVPPSAANYVQRAGRAGRRASSAALIVTFAQLRPHDRQVFAYPLNYVAGKVPAPQIPSGNVPIVRRHVHSVALSRFLRTNYGKSPEWPRVVEKFFGDGAGSPCEEFRQYLLSRDAGLRDELTRIVPPELHEELGVQDWAWAAALADPDPFQSPLARVEREKIADMQQYRRLMDEAAANHRFQQADRYQKVLNTISRAELLGTLASANVLPKYGFPVDVVPLKTAHVSAEVARDIELQRDLRVAVSEYAPGSGVVAAKQFWKSAGLQLLPNRQLPERKYAVCERCNRIYLDPEAGGSCPQCHGQTMNRTFVDPVFGFVAAPPPRKGLGEERPPRIFASRMLFYDFGPQQDRTCVLGPPSAHLVLGRFTRQGSLAVINNAYGRGFRLCHTCGFATAGAAAPTREGNGSHKHPVTGQKCTKTLARVDLGHLFTSDIAEFKFVDQDLAADSARASVLAALREGARRFLKAGDDDLGGLTYLEAGQPVFVLYDNVPGGAGLARSAFEQFACVMREALEVCNCSACGEHSSCYGCLRTYQNQHQHDQLDRTIAQEVITSALERAGSAAAAAS

Crispr_ID: NZ_CP042829_2

• CRISPR_ID: NZ_CP042829_2
• CRISPR_location: 1050870-1051042
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP042829_2

Consensus_repeat	Method
GGGAGCGGGGAGCAGGGAGCGGGGAGC	CRISPRCasFinder

spacers of NZ_CP042829_2

>2.1|1050897|21|NZ_CP042829|CRISPRCasFinder
ACCCGCCCCGGCCGCGCCGCC
>2.2|1050945|22|NZ_CP042829|CRISPRCasFinder
GGGGAGCAGGGAGCGGGGAGCG
>2.3|1050994|22|NZ_CP042829|CRISPRCasFinder
AGGGAGCGGGGAGCGGGGAGCA

CRISPR arrays and Neighbor proteins around NZ_CP042829_2

CRISPR arrays

The CRISPR arrays of NZ_CP042829_2

>merge|NZ_CP042829|2|1050870-1051042|CRISPRCasFinder
GGGAGGAGGGAGGAGGGATGAGGGAGGACCCGCCCCGGCCGCGCCGCCCCACCAGGGGAGCGGGGAGCGGGGAGCGGGGAGCAGGGAGCGGGGAGCGGGGAGCAGGGAGCGGGGAGCGGGGAGCAGGGAGCGGGGAGCGGGGAGCAGGGAGCAGGGAGCGGGGAGCGGGGAGC

>NZ_CP042829|2|2|1050870-1051042|CRISPRCasFinder
GGGAGGAGGGAGGAGGGATGAGGGAGG	ACCCGCCCCGGCCGCGCCGCC
CCACCAGGGGAGCGGGGAGCGGGGAGC	GGGGAGCAGGGAGCGGGGAGCG
GGGAGCAGGGAGCGGGGAGCGGGGAGC	AGGGAGCGGGGAGCGGGGAGCA
GGGAGCAGGGAGCGGGGAGCGGGGAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158066663.1|1054462_1054768_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066656.1|1046289_1048950_-|DNA-gyrase-subunit-A	unknown	unknown	gnl|CDD|235502
NZ_CP042829.1|WP_158066668.1|1058343_1059216_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066661.1|1052285_1053185_-|hypothetical-protein	unknown	unknown	gnl|CDD|236213
NZ_CP042829.1|WP_158066657.1|1049080_1050136_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|366006
NZ_CP042829.1|WP_158066648.1|1039590_1040535_+|TerC-family-protein	unknown	unknown	gnl|CDD|274743
NZ_CP042829.1|WP_158066652.1|1041976_1042279_-|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|376187
NZ_CP042829.1|WP_158066666.1|1056954_1057602_+|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NZ_CP042829.1|WP_158066660.1|1051109_1052282_+|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP042829.1|WP_158066667.1|1057655_1058354_+|A/G-specific-adenine-glycosylase	unknown	unknown	gnl|CDD|224115
NZ_CP042829.1|WP_158066651.1|1041640_1041931_+|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl|CDD|372305
NZ_CP042829.1|WP_158066664.1|1054919_1055459_+|hypothetical-protein	unknown	unknown	gnl|CDD|227902
NZ_CP042829.1|WP_158066654.1|1044657_1045419_+|YceI-family-protein	unknown	unknown	gnl|CDD|377274
NZ_CP042829.1|WP_158066665.1|1055466_1056834_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP042829.1|WP_158066655.1|1045431_1046274_-|EamA-family-transporter	unknown	unknown	gnl|CDD|307170
NZ_CP042829.1|WP_158066653.1|1042987_1044475_+|thiolase-family-protein	unknown	unknown	gnl|CDD|238383
NZ_CP042829.1|WP_158066662.1|1053194_1054385_-|MFS-transporter	unknown	unknown	gnl|CDD|340928
NZ_CP042829.1|WP_158066649.1|1040638_1041346_+|PspA/IM30-family-protein	unknown	unknown	gnl|CDD|224755
NZ_CP042829.1|WP_158068251.1|1059193_1060090_-|DNA-cytosine-methyltransferase	unknown	unknown	gnl|CDD|223348
NZ_CP042829.1|WP_158066650.1|1041342_1041648_+|hypothetical-protein	unknown	unknown	gnl|CDD|188404

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158066656.1|1046289_1048950_-|DNA-gyrase-subunit-A	gnl|CDD|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP042829.1|WP_158066661.1|1052285_1053185_-|hypothetical-protein	gnl|CDD|236213	PRK08272, PRK08272, crotonase/enoyl-CoA hydratase family protein.	3.03471e-66
NZ_CP042829.1|WP_158066657.1|1049080_1050136_-|NUDIX-hydrolase	gnl|CDD|366006	pfam00293, NUDIX, NUDIX domain.	9.30346e-17
NZ_CP042829.1|WP_158066648.1|1039590_1040535_+|TerC-family-protein	gnl|CDD|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	1.42114e-142
NZ_CP042829.1|WP_158066652.1|1041976_1042279_-|nucleotidyltransferase-domain-containing-protein	gnl|CDD|376187	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase. A member of the nucleotidyltransferase fold found in polymorphic toxins (NTox45) and polyvalent proteins.	4.51625e-20
NZ_CP042829.1|WP_158066666.1|1056954_1057602_+|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.7663e-12
NZ_CP042829.1|WP_158066660.1|1051109_1052282_+|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.07511e-103
NZ_CP042829.1|WP_158066667.1|1057655_1058354_+|A/G-specific-adenine-glycosylase	gnl|CDD|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	5.3475e-61
NZ_CP042829.1|WP_158066651.1|1041640_1041931_+|zinc-ribbon-domain-containing-protein	gnl|CDD|372305	pfam12773, DZR, Double zinc ribbon. This family consists of a pair of zinc ribbon domains.	1.15978e-07
NZ_CP042829.1|WP_158066664.1|1054919_1055459_+|hypothetical-protein	gnl|CDD|227902	COG5615, COG5615, Predicted integral membrane protein [Function unknown].	0.00172839
NZ_CP042829.1|WP_158066654.1|1044657_1045419_+|YceI-family-protein	gnl|CDD|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	8.72438e-19
NZ_CP042829.1|WP_158066665.1|1055466_1056834_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.86204e-71
NZ_CP042829.1|WP_158066655.1|1045431_1046274_-|EamA-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	3.56909e-05
NZ_CP042829.1|WP_158066653.1|1042987_1044475_+|thiolase-family-protein	gnl|CDD|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	2.79422e-152
NZ_CP042829.1|WP_158066662.1|1053194_1054385_-|MFS-transporter	gnl|CDD|340928	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily. This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.0491e-115
NZ_CP042829.1|WP_158066649.1|1040638_1041346_+|PspA/IM30-family-protein	gnl|CDD|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.8648e-23
NZ_CP042829.1|WP_158068251.1|1059193_1060090_-|DNA-cytosine-methyltransferase	gnl|CDD|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	3.02024e-21
NZ_CP042829.1|WP_158066650.1|1041342_1041648_+|hypothetical-protein	gnl|CDD|188404	TIGR03889, nitrile_hydratase_activator_P14k, nitrile hydratase accessory protein. Members of this protein family are found in operons with the alpha and beta subunits of nitrile hydratase, an enzyme with Fe(III) or Co(III) at the active site, and appear to be accessory proteins for maturation or activation of the enzyme. This protein is homologous to the beta subunit (see TIGR03888).	0.00243424

Protein sequences

>NZ_CP042829.1|WP_158066657.1|1049080_1050136_-|NUDIX-hydrolase
MYRSTGSPATPSATVGTSRDFPPAHFRKGVAIGHHRGLPGRPRQFPGRSADCYRETMSYKAPGSGREGSAVLLVAPDGSILLQQRDDDVWPAGIGRWTIPGGGREPGESPRETALREFEEETGVRLQRLRYVETVTTAQVPDLLPSCLHLFVADDPVPRTAIDVREGLDFQYHHPAAFPGLPMNPGTRQLLARFIASDAYRGTVGMLQPYRVGVGVIALDRWGRALLQLRDADLPPERFPGQWSIPGGLVEPDEPPDAAAFREFEEETGVLLETLRLFRVYRAAELPGSLTHVYHIYYDDPDLPESLIDVREGQAFRYWHPSELDDLHVAGPAAAVLREFFASTHYRRLFH
>NZ_CP042829.1|WP_158066656.1|1046289_1048950_-|DNA-gyrase-subunit-A
MSIEPTSQVRPVEIEQEMRTSYLDYAMSVIVSRALPDVRDGLKPVQRRILWGMYEGGARAGTPYRKSAATVGDVMGKYHPHGDQAVYDTLVRMAQDFSLRYPLVDGQGNFGSVDGDPPAAMRYTEARMSAIAEEMLADIDQNTVDFEPNYDGRHEQPSILPSRIPNLLLNGSSGIAVGMATSIPPHNLGEIADAISMLIENPETTTLDDLLTVIQGPDFPTYGIALVGKNKEQLRLAYGEGHGRITMHARTTVEESGKGRTAIIVTELPYQVNKAQLIEKIAELVRDRKIDGIADLRDESDRNGMRIVIELKKEGSVQQVKNLLFKHTAMRSTFAINMMAIVDGAPRRLGLKRALELFIDHRREVIRRRTEYQLEKAREREHILQGLLRAIDMIDAVIATIRAAESAQAALDLLQGVGLVQLERLPANSPAAIRSLAQRNPFSFTEVQARAILDMQLRRLAALERQAILNEYEELIKKIAELEDLLANPRKIDFLIRDDMKELKKKYGDPRRTEIVEADPEDFREEDLVPHQDSVVTLSIRNYIKRMPLEEFRRQSRGGKGARGAPTREEDAVMKLVVCDSHDNLLFFTDRGKVYHLRAFDVPDTKKQAKGLPIVNLIDLEPGERVTAILPVSSYDRDFILLATRNGEIKKTRLSEFEEVRRNGKIAFNLDENDQLIAARLATNETNVILVSSDGLAIRFKIDDLRDASRASGGVRGMKLKPGAYVVGVETTDDGSDLLIISERGFGKRTAIDEYPLQGRGGQGVKTLNITEKTGNVAACRMVDPRQDLLLVTRDGIVVRTRVAEISRIGRNTQGVTVMRVGEGDAVASIAAFMMDDDGQARSRRRARPSDNGAASDAALNETLPLGLDVDDAGDGNGGDDAASGD
>NZ_CP042829.1|WP_158066655.1|1045431_1046274_-|EamA-family-transporter
MTSILFGLGAAVAWGTSDFLGGRFTSRLPVFTVGLASHLAAVLLLGMAVLVSRPDASADAVRWGLTAGLATSFGGLALYRGLSLGESAVVAPLSACGAVIPVVAAILTGDAPGPAALAGIALALSGIILVSLPSEGRVFTHGRHLLPVALGLTAALGFGLFFLLIGRASATDGDALVAVLSARTGAALFTAAAGALVGGLRWPGAGRGLRLASVGAIDSAANLSFALATSRGNVAVASVLGSLYPVQTLILARFVAGERFTHLRLAGAALALAGVALISA
>NZ_CP042829.1|WP_158066654.1|1044657_1045419_+|YceI-family-protein
MKRKLLLFGGAGLAAFAVAAFAAWFFYFRSDAPEEVSLEGALETVRTPTAAAPAGAGSTPAPGATQPAGAGASAGLDGTWTVAAAGETFVGYRVQEELAQVGATTAVGRTSDVKGTVTIKGNRVEPGSTFTANMQALKSDRAQRDNALRTQALETNRFPTATFTLKDAVTLPASFANGEALTTTLKGSLELHGVTRDVEIPVQAKLENGLIVVVGSLEIRFADYDIAQPRAVIVLSVDDKGIMEVQLVLQKQG
>NZ_CP042829.1|WP_158066653.1|1042987_1044475_+|thiolase-family-protein
MTGRMTAGDGSTARRQPLSRAWRRACSNEGDSLARPNGLSCTALRAGDAGPARETQEEGTPLELQNVVIVDGVRSAFARGGRGKLVATRLDEAGAQVLRALLERNPKVQPRMIEDIGLGNVGGAGELAGIGADTIARLAGLPSEISAFDTNRQCGSSMEVLHRIAQSIAVGATEVGIAMGAERMGRQLGGGQRGPTTRITEFNRRRLEQTPEQRNLPPDHFENFSVPFPDEILDYSPVLSMVQTAQNVAEVYNLSREELDQFAVDSHRKAVAAYEKGVYKDEIIPLEVEDPVFDAEGNWVESERGPMIIFDRDECIRPGTNIETLSQLPPVKGIVSPTGQELRITAGNSCPTNDGISAVLLMSEKKALELGLEPLARIKGYGIAGIKPQVMGLGPVPSTKKALKYAGIEADQIDRVEFNEAFAAQVIPSCRELGIPLEKVNVNGGSIAIGHPLGATGARLVLTVAHELRRSGKKYGLATQCIGAGMGISTIIEAL
>NZ_CP042829.1|WP_158066652.1|1041976_1042279_-|nucleotidyltransferase-domain-containing-protein
MDPRARAVADWLAERLARHPAVRRVILFGSRARGDHRERSDIDLAIDAPGADPVTWDELLALVDEAPTLLHIDVVRLDTAPPALREAIEREGIELARVHP
>NZ_CP042829.1|WP_158066651.1|1041640_1041931_+|zinc-ribbon-domain-containing-protein
MVDELFEVFEELFERRNKKKKKEKEGKGGGARDGVPAAPPVFCVDCGVRNEGGARFCMECGSLLPSPGEELRCLSCNTQLPLKAKFCPRCGAKAAV
>NZ_CP042829.1|WP_158066650.1|1041342_1041648_+|hypothetical-protein
MIVRLMGRGQWRLDDALIDELNRIDAALDDDINRGDATEFREHLAAMHRLIAERGEPVPEDELVPSDAFVPPVDCSIEELRKLMDPDGLIPGGPAKEAVDG
>NZ_CP042829.1|WP_158066649.1|1040638_1041346_+|PspA/IM30-family-protein
MLKRLAAIFQAKANKALDRLEDPREMLDLSYEKQVEMLRDVKRGIVEVTAARRRLELQAEELRAKLPTFDAQAMQALKNGREDLARVALERKASTQAQIESFEAQVANLRAEQEQLVQAEQRLQAKVEAFRTRKEVLTAQYTAAKATVRIGEAVTGLSEEMTDVGYAIQRAEGRTAQLKSRGQAIQELLESGVLEDSLGGTTGIDRELEALGRQASIDAELERLRAAMAAGEANR
>NZ_CP042829.1|WP_158066648.1|1039590_1040535_+|TerC-family-protein
MTELLPWLIFGGIVAGMLALDLGVFHREAHVVSRREALAWSAAWITLALAFNAGVFFFRGSDAGVEWLTGYLIEKSLSVDNVFVFLLIFSAFAVPPVYQHRVLFWGILGALVMRAVLIAAAGLLITTLHFVIYVFGAFLIFTGIKFLRDQEHAPDLEQNRFVRLTRRLFPVTARYEGQRFFLRREGVLYATPLFLVLVLVESTDLVFAVDSIPAIYAVTSDPFIVFTSNIFAILGLRALYFVLAGYLGGLRFLKPALAAILAFVGTKMLLVDLYKVPSLASLAVIAGVLAAALFASWRWPKPAHAAVHEPAAGR
>NZ_CP042829.1|WP_158066660.1|1051109_1052282_+|cytochrome-P450
MVAAPNVNDPAFLENPFPFYELGRAMSPLVLPDRGLAMVFGYDDCAAILKDWETWSSRFPPPPDVTDPPEPTMLNSDPPRHTRLRSLVSQAFTPRMVEQLEPRIREITRELLEPALEAGACDLVAALAYPLPVIVIAEILGIPPEDRAQFKEWSDEVVASLGTGLGGGRQVRAEVFEEMREYFTRMTEERRRHPRNDLITGLVEAEQDGERLTFPDLLQMLILLLVAGNETTTNLISNAMLSFMEHRDELAKVEANPALIPSALEEVLRFNSPVQATARRPTRDVELRGRTIPAGMVTLVWLAAANRDPAQFPEPLRFDVTRSPNRHLAFGMGIHFCLGAPLARLEARVAYEELLGRATGFERTTDGPLPRVPTFFMRGVLELPIAFRRR
>NZ_CP042829.1|WP_158066661.1|1052285_1053185_-|hypothetical-protein
MTRTYENLLIDRVGTDGRVARITLNRPEKMNALSQELLFEFWDALHDLEADDTARVIIVRGAGRTFSAGYDLAPPRGGADGVVRRYRTTDEKGRRLLMGIRTGMQQITDIHLYFWNMAKVTIAQVHGYALAGGCELAMMADLVVAAEDAQLGHPGLRGLGTSRTGVIWPLVIGMRKAKELYYTGDSISGREAERIGMINYAWPKEELEENTIALADRLANATADHLAILKLNMNRFYENMGIYSSVRSSTDMDAMAQMTSFSYAWQDRMRESMEAGTGLKGALDWREGMYRNLPPGLKR
>NZ_CP042829.1|WP_158066662.1|1053194_1054385_-|MFS-transporter
MLPRFRHIPRPAWLLGLTSFFADLSSELVYPLIPIFLTATLGAPVAAVGLVEGVAEATAYATRPLAGRWSDAAGARKPFVVAGYALAAVGKLILALAPAWGVALAGRAVDRFGKGIRTPARDAMLADVATPENRGRIFGFHRAFDTLGAVVGPLFALLFLAVVGQQHLRWAIAIALVPAAISVLVVARVPEVRAPARRSSDDPRPGIRNLPAAYWLFLGVTGLFMLGNSSDAFLILRAKDLGLTTTAVVLAYVVYNAVYALLSYPAGALSDRIPRPAVIVGGYLVFAAVYLGFAVAGSGALAWVLFPLYGAYIAATEGIGKAFIADLAPPEARTTALGLFQGVTGGLVLAASLLAGVLWDAFGPKATFSFSAAAALLAALLAAALLAAGRLRPASV
>NZ_CP042829.1|WP_158066663.1|1054462_1054768_-|hypothetical-protein
MSDTAHWQGDARLAFGEGFETRVAASLSRNGGPAPWTGELVIHGVAAILPGDRVELTVGRSTRTAIVREAAIRGGAGHRTTTLRIDGEGTPPAALRERQGP
>NZ_CP042829.1|WP_158066664.1|1054919_1055459_+|hypothetical-protein
MDTFLHMTFLWLHILGIALWVGPQVFLAVVWGPASRQIADLPTRVAAMRTITRRFGYLGGLGLALVIVAGTYLVFTWRDYYAIPSDAEFTSLRFGVWFIIKMNVLLVMLAVVALHTFWAGPKQLRLYEAKARGEAVDEGALRRARMVSMVLSVLGLLLTLAIMVIGVMIGTSGWSLQEV
>NZ_CP042829.1|WP_158066665.1|1055466_1056834_-|MFS-transporter
MQRSRTAPRPRPRAEAPALPQPRSLRAIAARQFASLAVYNYRVYFIGQLISLVGTWMQTTAQAWLVLKLTGSPLALGTVTTLQFLPITVFTLFGGAFADRLPKRRALVITQSLAMTQAAVLALLVATGRVQLWHVYALALWLGTVNAFDGPVRQSFVVELVGRERLVNAVALNSSIFNLARIAGPAVAGVTIAAIGLSWAFAANAASFLAVLAAYALMRPSEFRAVPKSPARGNVLRQVRDGLAYSARTPAVAFFFILLGVIGTFGYNFTVIVPLVAEFVLHVGPQKFGMLTSAMGAGSLTAALIMAATGRLRPAWLLLASAAFSGLLAAVAFSPLYAVTVALLFFLGIVGVAFSTTINTSLQVIVPDELRGRVMSIFFLLFAGSTPIGGYITGFLAEHLGVRVALTAMASLCAAGTILAAAYYIRIGRDAFRALEAEDDAETPAAGAPAVDAAG
>NZ_CP042829.1|WP_158066666.1|1056954_1057602_+|class-I-SAM-dependent-methyltransferase
MRQPASPMPSGSEPPLPGAAPRRRVVIDLGCGRRKKPGAIGLDIARVPGVDVIADVTRPLPLKDSSVDEVYASHLIEHVDDLLAFMGEVWRVCRPGALVYFRFPHGSTPFLTWKDPTHRRGVYLAMFEYFDPTTLDGQVWGYYHPAKFKIERRRLHFNLNFDTVRPGRVRAVLGWVFDRLANRDERWLYVCERWWGNWVGMEEAEIWLRVLKAGG
>NZ_CP042829.1|WP_158066667.1|1057655_1058354_+|A/G-specific-adenine-glycosylase
MKRPRKHWSLRETGRPLPPRDAIEDFQTRILAWAQEHGRDFPWRHVTDPYRVAITELLLQQTSATAVAKCWHDFFEHFPTPSALASASDDEIASAIGHLGLHQQRTRRIRALARWMAEHGNSLPTTREELEAVPGVGQYVASAVLAVCAGQPEPLLDVNMTRVIERYFGERTLADIRDDPWLQETARAAAPGARLGWAVLDFAASICRARAPRCSQCPIVMSCSSTSLPYES
>NZ_CP042829.1|WP_158066668.1|1058343_1059216_+|hypothetical-protein
MKVSVLQAINLFSARLILNNDKFLVPFNKAYLPQIMAHSSDRDFPVSLGQHMREIFRSYDAGDRSQSSVSKAGIAWELLCALYLTACFKGTDAAAVHRSHARLLLPSSVREALRVTISGKKLVPDNDIIVLVWRGEQVPEIKVDNWKRVPKKRIDGALNDPSKIQLFAISCKTTFNDQINAALFWDMIYRRYKQDHARIAVGGRAQLSQFYDGQLRTALFTVPSQNKVDFNATSAPVVKGQIMSGGVYWGRPTVDFIESIDRFFPTWGIPTISSKWSEESQEATMHPWPF
>NZ_CP042829.1|WP_158068251.1|1059193_1060090_-|DNA-cytosine-methyltransferase
MRLNAMHFGVPQHRPRMFLVGLRTDVARAAGLSGSLPFYVSGQLPPSPLCPVPSVNRPLTVRHALWDLVDVDGELQYAADCGDLSYMCSPGRYAWTMRCSPEWLPPALPEAAPPSRPLNATQRKHSPPIELRFRLYQYFDAVGIRPGLLNVAADPGLDGNSRVEVVEHFLRAAPVPAIAPDGTVLAENKQELVALVVAAATKKHSQRPMRWDEPSPTVMSLPDDFVHPRYPRTFTVRELARLQSFPDNFEFRSKETTGSERRKFEVPQYTQVGNAVPPLLAKAVGQTLASQIRKAKDA

Crispr_ID: NZ_CP042829_3

• CRISPR_ID: NZ_CP042829_3
• CRISPR_location: 1297217-1297344
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP042829_3

Consensus_repeat	Method
GTTTCACGTGGAACGCC	PILER-CR

spacers of NZ_CP042829_3

>3.1|1297234|45|NZ_CP042829|PILER-CR
CCACACTGCCGCTTCGCGGTGCTGGCAGCCCAGCCCCGGGGCACG
>3.2|1297296|39|NZ_CP042829|PILER-CR
CGCGACGCCGGGTTCGGGGACGGGGCGTCCGCCAGGCGT

CRISPR arrays and Neighbor proteins around NZ_CP042829_3

CRISPR arrays

The CRISPR arrays of NZ_CP042829_3

>merge|NZ_CP042829|3|1297217-1297344|PILER-CR
GTTTCACGTGCCACACTGCCGCTTCGCGGTGCTGGCAGCCCAGCCCCGGGGCACGGTTTCACGTGGAACGCCCGCGACGCCGGGTTCGGGGACGGGGCGTCCGCCAGGCGTGTTTCACGTGGAACGCC

>NZ_CP042829|3|3|1297217-1297344|PILER-CR
GTTTCACGTGCCACACT	GCCGCTTCGCGGTGCTGGCAGCCCAGCCCCGGGGCACGGTTTCAC
GTGGAACGCCCGCGACG	CCGGGTTCGGGGACGGGGCGTCCGCCAGGCGTGTTTCAC
GTGGAACGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158066876.1|1296544_1296769_+|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl|CDD|376620
NZ_CP042829.1|WP_158066879.1|1299477_1300488_+|KH-domain-containing-protein	unknown	unknown	gnl|CDD|224760
NZ_CP042829.1|WP_158066877.1|1297443_1298667_+|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl|CDD|274511
NZ_CP042829.1|WP_158066875.1|1296143_1296548_+|ribonuclease-P-protein-component	unknown	unknown	gnl|CDD|376392
NZ_CP042829.1|WP_158066884.1|1303722_1304952_+|ribose-phosphate-diphosphokinase	unknown	unknown	gnl|CDD|234929
NZ_CP042829.1|WP_158066870.1|1289715_1291011_-|hypothetical-protein	unknown	unknown	gnl|CDD|376177
NZ_CP042829.1|WP_158066872.1|1292431_1293763_-|alanine-racemase	unknown	unknown	gnl|CDD|143481
NZ_CP042829.1|WP_158066874.1|1295987_1296131_+|50S-ribosomal-protein-L34	unknown	unknown	gnl|CDD|366117
NZ_CP042829.1|WP_158066885.1|1305604_1306507_+|thioredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|372611
NZ_CP042829.1|WP_158066871.1|1291076_1292318_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|223531
NZ_CP042829.1|WP_158066873.1|1293662_1295915_+|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl|CDD|381604
NZ_CP042829.1|WP_158066869.1|1285894_1288123_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173799
NZ_CP042829.1|WP_158066881.1|1301323_1302094_+|ParA-family-protein	unknown	unknown	gnl|CDD|379293
NZ_CP042829.1|WP_158066868.1|1285062_1285869_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066883.1|1303109_1303586_+|RidA-family-protein	unknown	unknown	gnl|CDD|100006
NZ_CP042829.1|WP_158066882.1|1302090_1303107_+|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl|CDD|275105
NZ_CP042829.1|WP_158066886.1|1306562_1307324_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|131480
NZ_CP042829.1|WP_158066880.1|1300580_1301324_+|hypothetical-protein	unknown	unknown	gnl|CDD|238912
NZ_CP042829.1|WP_158068260.1|1288515_1289709_+|phage-portal-protein	unknown	unknown	gnl|CDD|377466
NZ_CP042829.1|WP_158066878.1|1298666_1299527_+|membrane-protein-insertase-YidC	unknown	unknown	gnl|CDD|274665

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158066876.1|1296544_1296769_+|membrane-protein-insertion-efficiency-factor-YidD	gnl|CDD|376620	pfam01809, Haemolytic, Haemolytic domain. This domain has haemolytic activity. It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.	3.59504e-33
NZ_CP042829.1|WP_158066879.1|1299477_1300488_+|KH-domain-containing-protein	gnl|CDD|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	2.52649e-40
NZ_CP042829.1|WP_158066877.1|1297443_1298667_+|PQQ-binding-like-beta-propeller-repeat-protein	gnl|CDD|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	1.53068e-30
NZ_CP042829.1|WP_158066875.1|1296143_1296548_+|ribonuclease-P-protein-component	gnl|CDD|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	3.09183e-24
NZ_CP042829.1|WP_158066884.1|1303722_1304952_+|ribose-phosphate-diphosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	4.9218e-153
NZ_CP042829.1|WP_158066870.1|1289715_1291011_-|hypothetical-protein	gnl|CDD|376177	pfam18755, RAMA, Restriction Enzyme Adenine Methylase Associated. An alpha+beta fold domain associated with restriction enzymes across prokaryotes and fused to JAB deubiquitinases, and chromatin proteins in a wide range of eukaryotes. The domain is predicted to function as a modified-DNA reader domain.	1.24116e-14
NZ_CP042829.1|WP_158066872.1|1292431_1293763_-|alanine-racemase	gnl|CDD|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	1.02662e-154
NZ_CP042829.1|WP_158066874.1|1295987_1296131_+|50S-ribosomal-protein-L34	gnl|CDD|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	4.99539e-11
NZ_CP042829.1|WP_158066885.1|1305604_1306507_+|thioredoxin-domain-containing-protein	gnl|CDD|372611	pfam13462, Thioredoxin_4, Thioredoxin.	1.34336e-16
NZ_CP042829.1|WP_158066871.1|1291076_1292318_+|AAA-family-ATPase	gnl|CDD|223531	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility].	5.978e-39
NZ_CP042829.1|WP_158066873.1|1293662_1295915_+|lytic-transglycosylase-domain-containing-protein	gnl|CDD|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	8.58455e-43
NZ_CP042829.1|WP_158066869.1|1285894_1288123_+|S8-family-serine-peptidase	gnl|CDD|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.45756e-68
NZ_CP042829.1|WP_158066881.1|1301323_1302094_+|ParA-family-protein	gnl|CDD|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	3.67254e-92
NZ_CP042829.1|WP_158066883.1|1303109_1303586_+|RidA-family-protein	gnl|CDD|100006	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	3.12299e-67
NZ_CP042829.1|WP_158066882.1|1302090_1303107_+|ParB/RepB/Spo0J-family-partition-protein	gnl|CDD|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.12249e-83
NZ_CP042829.1|WP_158066886.1|1306562_1307324_+|alpha/beta-hydrolase	gnl|CDD|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	1.29049e-19
NZ_CP042829.1|WP_158066880.1|1300580_1301324_+|hypothetical-protein	gnl|CDD|238912	cd01937, ribokinase_group_D, Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.	1.62417e-15
NZ_CP042829.1|WP_158068260.1|1288515_1289709_+|phage-portal-protein	gnl|CDD|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	3.92201e-28
NZ_CP042829.1|WP_158066878.1|1298666_1299527_+|membrane-protein-insertase-YidC	gnl|CDD|274665	TIGR03592, yidC_oxa1_cterm, membrane protein insertase, YidC/Oxa1 family, C-terminal domain. This model describes full-length from some species, and the C-terminal region only from other species, of the YidC/Oxa1 family of proteins. This domain appears to be univeral among bacteria (although absent from Archaea). The well-characterized YidC protein from Escherichia coli and its close homologs contain a large N-terminal periplasmic domain in addition to the region modeled here. [Protein fate, Protein and peptide secretion and trafficking].	5.18734e-63

Protein sequences

>NZ_CP042829.1|WP_158066876.1|1296544_1296769_+|membrane-protein-insertion-efficiency-factor-YidD
MIGRVLAKPLIWLVVAYQATFSKVMPPVCRFEPSCSRYAKEALERHGAFRGGWLALRRLSRCRPFGGSGYDPVP
>NZ_CP042829.1|WP_158066875.1|1296143_1296548_+|ribonuclease-P-protein-component
MDRSRRLRKGPEFDTAYQKGTAVRGPLLVVRVSPNGLGRDRWGFAVGRRLAPLAHDRNRVRRRLREAARQAGGEQGRDIIVVAREGALTAPVAELAAELRRLLRRTSKGGAPGERRLAGDAEAAGQEQKQEGDR
>NZ_CP042829.1|WP_158066874.1|1295987_1296131_+|50S-ribosomal-protein-L34
MATKRTYQPHRIPRKREHGFLKRMSTRAGRLVLKARRLKGRKRLTVV
>NZ_CP042829.1|WP_158066873.1|1293662_1295915_+|lytic-transglycosylase-domain-containing-protein
MEPSIGDVRAGRNRAAWGGFVLLCTAVVLAAGLIEVGRESAPPPAAERTSTPAPPPAPSQTATASPGPGGPGAGRNGPEELLCEGRFAEARAAFEAAAQDPAAAAEAWFGAGRAAEELGDREGAIAAYRRALGAASAGSETADRAAYRLLRALNNAARFGDALDVELAAGGGTVAAYARYERGRALAGAGRGAEAAALWEPIAADTGLAAAVRAQALEGLAGLARDAGDLAALARWLDARIALDGSPAARFERAEVARRLGDPAGFERELRALLAASPLSREATLALGALEAAGYAVDPGQAGFILYRRGAYAEAARVLTAGLEEPGIDAAARAYRAYYLAAALEELGRVDEAVAWYDAAAATGADSPFVHRAKYWAARVLESAGRRGQSAVRYLDLAVNGPPGEFTAEAAFRAGYDRYVERDITGALAAWEQTAAAASPRLEYWRGRALEAAGRKGEAADAYRRAVALDRFDFFAIEAAARLGEPVLALEVRYRARDLSRGVDWEAIADWLRGRIGGDWPGSAPTPACALARAGLGDEAEAELERAAAGARPWRLLELAREARSCGLGHLAIGYAVRVRQAAGAAPYDVPADLLRVSYPVFYGSAVDRAAAAANIDPLFLAALVRAESLWDPGAGSAAGALGLTQVIPSTGEGIARALGVAGFETADLFRPAVALEFGAYYLGVQLGRFGDPLLALAAYNAGPGNALRWAAGGDAGAAELAERIDFRETQAYVRVIVEVYAYYVAAWGP
>NZ_CP042829.1|WP_158066872.1|1292431_1293763_-|alanine-racemase
MSPAARTTAVQRRTNPPQAARLRPALTSPMLGSTREAGQRPPRGQAKGPVRLVAHPPTTRNALAEVTTALNAWLEIDLDALEANVRTLKALLGPVELIAVVKANAYGAGAAAVAPALEAAGVDRFAVVWPHEGYLLRQAGVTRPIVVLGHAFPADATQAVRARLTLTCHSRALADALSAAAVEAGATAAVHIKVDTGLHRFGNELEEAIALAEYCRTLPGIVVEGLMTHMANADEADDSFSEEQHRRFEAAARALPWIPYLHTANSATALRRPGFRYSGVRIGLALHGELPANTPGPELRQVLALRARLARVSRVAPGEGVSYGLTWRASRPTRAGLVPIGYADGWRRSLTNAGEVLVAGRRCPMIGRVCMDQFLADVTDVPGADEGTIVTLLGADGADRITATEAARLAGTIAWDLLAGLSGRLPRIYHRGGHVETIVPPAW
>NZ_CP042829.1|WP_158066871.1|1291076_1292318_+|AAA-family-ATPase
MTPHLVTLLVDSDELAREMLRRRLEQAGLEVTLERPGGLAAQQTIAESHPDVIIVAVEPPMQRALQVIDFARALLPGAMLVAYAREWSPHLERRLMQAGVNDFLHGQVSRERLIEVAARARAMAIRRAKLATEEFAPLGRIVTVVGQKGGIGKTTTSTNLAAAIAASGQRSVLLIDLDTRFGDVAVMLDVKPEYTVSEVAREPQYLDREVFHRVLLRHESGAYVLPAPRDYRSWLNCTPEEIQRLIRFAATVFDVVICDTPGTYNDVVGAAVEVSDRVVAVTSSDPASLKNAALLVEHSRMKGRPDDALIVTLVHGHGEAAPARGEVEFVIGHPVNFEVPFDPAVRKATQAGVPVVRYRPGAPAARVFEALAAAVAGYPPPAGEREVRARFFGVFGRKARQAGAQPGRERAAV
>NZ_CP042829.1|WP_158066870.1|1289715_1291011_-|hypothetical-protein
MGRWISTSGRNSYGVLPLRSPAVHRRVTAGGRRSPAPAARRPRRLTAGESCAAQRRELCAAIEQRCRADYAPGMTEPPAEFLNHVQSLPTYASQNLSEADTRVYLIDPVLRLLGYTTVGDLRREVPVPATREFIDYELYAGGKAQAILEAKAVRLPVTDAAAAQCVQYASILGVRWCLVTNGVTWAIYNAHAAGALPEKRVATVRLDGSEDEVLEAWEVLRLFSRESLASANPLSRLLAERVVADELSNPDSQAVQALRRAVRSRFGERISGQAVVEIIDKLMGRTRRSPAAANGPGAEAKAAGSPAPEGSGSAAAPAPPAAAEPGGAQAAKRKVNFPLKPDGSRVTIADLVGAGLLRVGDRLTIQIGSSFGEGFVRPDGIQVNGQAYTNPSIAARAVRDTAANGWGYWMCGDRTLADIRAEYLRRLTGGA
>NZ_CP042829.1|WP_158068260.1|1288515_1289709_+|phage-portal-protein
MARYRENLAFYQGRHWTGRGRRGERRLTFNYARAIVDKVTGYLLAGAAVQVVGDDSPAGIERARAAEQALRRVEAANGLSQLDFETELDCAILGDGAYRVAWDAAAGEVRVTAPDVQGLFAWRDPGDPARLTGVAHRYRAGDEELVEWWSAETFELWRGSELAERLPNPYGFIPYVIFPNLREPKEPWGASDLPPVMEANRELNRAFSQLSQVLELSGNPIAVLEGVTGSEDITVEPGAIWEVPEDARAYLLDLLQGGGVALHTAYIDLLYRVIHDLGESPRTAFGHNPQGLSGVALNMELDPIARKVERKRRIRTAVYERRAWMVLQLLARFAGLEVEGLRPVMQWGPVLPADRSRQVQDARALVEAGIISRRTAAASLGIDDPELERALVREEAG
>NZ_CP042829.1|WP_158066869.1|1285894_1288123_+|S8-family-serine-peptidase
MRRRWFAILLAVAGISGAAGAAGSSPAPAGADPAQPPAAYIAVQFDTALRAQARQEWMPPPTLAEQGFASIPVPPGRDPAEFAAEISRAPNVVSAVPDAPVRAAEIPNDPYYLGSGSGPNQAQYLAAIGAPAAWDLHTGSREVIVAVIDSGLDVRHPEFAGQLWENPVDNGSDGIDRDGNGCINDRYGCRFINLTQVNAAMCGYTSSTPTGAILDDMPSSHGTLVAGIIGAAGDNGIGVTGVAWKVRLLTVKALDCRGEGFMTRIAEAIVYAVRQGARVINISIASDPPHTQADIPALRAALQLAQDSGVIVVAAAGNHAAGQPAGVAYPAAYTQYPNLIAVGAANNLDGMTWASYSNYGPAIDFAAPGNRLLSTTRTDVGLSNPYAEIGEPNGGFQGGTSFATPLVSGMFALLISRNTRLSADDYIAAARAAATPAPPAPHGQNWAGSGIINIGGAVARIPLSLTGVPQHDWRDVPGGTVIEARVGTAVCGSTTAIAAGPVSTFTVKVKSAAEQPGCGAPGATVELVIGGLAAKPTVTWGGRNTDLGVAGLFVSSVSPPPGSVVVQTIGSGWSNLAHLEATGPLPGAASTLPLPWNAIYRWDPLKWAFSEAEGVLGAYRRFIRGAPGAVSDYPVIQQYDAYWVDAPAANVASLNPNPAPGRTIQLAAGWNNITYTGQSRAVADALSSIAGKYTQVLQYDNASGRWLSYLPGQPRYLNDFGGLFTLRVYWVYMKEPGTLVMQ
>NZ_CP042829.1|WP_158066868.1|1285062_1285869_+|hypothetical-protein
MARRKRPSQPVLVLLAGLVVIAAAAVGTLLLTSGGDGNSGGSANVGTNVKEPTPASSGGLAGGPEPTVQLPASKYAPLLSEMPPEMKVNVSETFAMNLGTFSASYWFDTNAQGEELAKQWRILDGYQVQYDPVGLAAQVAKGGYYAWAEVYLFENPAGAKLAYDYLEGRLAARKGSERAQAKPLGNQSAAFRYAGPTIGTTDIPSVYHRFVFRRGNAVVAIQTFGAVPYMSTDQARELALLVDAKLLGQAPAVEPTPIPTPAIGVIGN
>NZ_CP042829.1|WP_158066877.1|1297443_1298667_+|PQQ-binding-like-beta-propeller-repeat-protein
MFVVPRGTPPPPTARKQRACYHPRVTRLRLAGAALLAAAALLASACVSVTNPEGWAPPVLDGTALYLTTDHGHISRTALAADGRSATAAWTFPDKDIKADDKLRPNAAYGPPILADGRVYYATYEAGVFALNAETGRPEWPEEGKTNASAIKGNIAGGLAYANGILFFGTTEGRLYGWYAANGAPAQGWETPLQFDSGIWATPVAIGGTLYVATMNGELHAIRISDRSPAWPQPLKISGAIPDLVALDDARLFVPSINRHVYIVEAATGRVLTDFRAKDWVWTAPALDGNRLFFGDFGGHIYGLDISTSPATELWSPASTEGHRVKAAPVIVDDVLVVADRGPVVTFIDARSGEVLNRVPIDGAGTVRANLLAANGGAYILTTKARLFFANPANRSVVEVPVSGVKR
>NZ_CP042829.1|WP_158066878.1|1298666_1299527_+|membrane-protein-insertase-YidC
MGELFTIALLNPMVNLLVLLNNVLFGSFGLAIIAFTILVRVATFPLTYRQLHATRQMQAIQPRVQEINKKYSDPKRRQEEMMKLYREAGVNPLGCLGPMLIQFPILIALYSAVRIALPNSPEALEKLSSHVYDWAYLQHALPVKEFFLGMDLRHPNLLMVVLVGITTYAQSKTTVTVSTDERVRQQQAMMNVMLPLMFAFFALQFPSGVSLYWVVNSIVGIGFNILIYGFKPLGIEPFFKVRAPAPAPAAAEPAPAAAAVSSAPELRTPTHGPGRSKRQNRRRRPE
>NZ_CP042829.1|WP_158066879.1|1299477_1300488_+|KH-domain-containing-protein
MDQAEASGKTVEDALNNALAILGATRDEVEVTILDEGKKGGLFSRGRDAVVRVTRIARPGAGPAPDPAPAPSAADEPRNGGGRPRQPRRSPQAAEGGQRGAGPAGARSAEPPPLRLTQADFLRPGETAPAAPARAERPRQPARPRQERPAAPARPARPSRPSRPKEDQPHVEPDINAEEVDFAAQTIDDILRILGIDAEISIREPITPGDGRGSVLAVIDIRGDNLGVLIGRRGETLLALQFLVNLALARKYPGRGGVTVDIEHYRHRNEERIVEMARRMGDRVRQTGTPITLEPMSAAERRIVHLQFVDDPELETHSIGEGENRKVVISRRGEGG
>NZ_CP042829.1|WP_158066880.1|1300580_1301324_+|hypothetical-protein
MARSLGCEVTLITALEPDFPLGILDGIDLRAAPGLVARYENRYDARGNRTQRLLAPGSDLQLVPHLYPGETFDLVFYAPAYHEFRKAPLRFKGAVVGVSLQGALRACEPDGRVVPNPRPLEAARALVRPGWCAFLSEEDTAAPEALAAALAAEKTLVVLTRGYNGATLFELDGSTQSYPALPALATEPTGAGDCFAMAFMVRLAETDSVDQAMRFALAAGALAVEAPGLAGIATRAAIEERMTREAA
>NZ_CP042829.1|WP_158066881.1|1301323_1302094_+|ParA-family-protein
MGARIVSLVNQKGGVGKTTTAVSLAVALARRGQRVLLVDLDPQANATSALGVLRSDRPGVYDALLDETPIDECIARVEAEGVDLVPSSAELSGAEVELVPVLARERRLVNALQPVRERYDWVLIDCPPSLGLLTINALTASDSVIIPVQCEYMALEGLSRLMETLELVRRNLNPGLYILGVILTMFDPRTRLAQQVVDEVRGHFPQTFATIIPRSVRLSEAPSHGQSIFRYDPGGRSAAAYEAVASELLERVGVAV
>NZ_CP042829.1|WP_158066882.1|1302090_1303107_+|ParB/RepB/Spo0J-family-partition-protein
MTQPKRGLGRGLDALFGSSSAAPPVQEPPAPAPQPPASEAPTIPEREPAHEVPPEAAARVAPEPRPAPPARRGGPELLDIDLIAPNPEQPRTHFEPEQLRELAESIREHGIIQPLIVTRDDEGGYRLIAGERRLQAARLAGLETVPVVVREAADSELLELALIENIQRADLNPVEEAMAYRRLIEEYGLTQEEVARRVGKSRATIANALRLLQLEAEIRRSLVSGEITEGHARALLGLPEGRGRVNAWREVVRRQMSVRDTESYVRRQLAASPATASKPAAQTARRDAALSDIEARLRRALSTRVRVEPQKKGAKIIIECYSPEEFENVVATLLGEYQ
>NZ_CP042829.1|WP_158066883.1|1303109_1303586_+|RidA-family-protein
MAHEERPEHRLADLGIELPAVPPPAGLYAPAVRSGSQLFVSGQVPRAADGSGVAAVGKLGHDITVEEGAALARVCALQALAVVRAELGSLDRVRRVVRVAGYVASAPGFTQHPAVINGASQLLLDVFGEAGRHARVAIGVAELPAGVPVEVEFLFEVD
>NZ_CP042829.1|WP_158066884.1|1303722_1304952_+|ribose-phosphate-diphosphokinase
MRAAACIDGFNLYYGLRALRERAPQFGENRWLDLRRLAQELAPGAELGAWAVRAGHTCSPFPAPCSLLPAPFYLPRPRATLHLGAARRPAASRGLPVYNDLAIFSGRAHPALAEAIAARLGRSLGRVDVFEFSNENIFVQFQENIRQRDVFLVQPFVSPVNTSIMELLIMIDAARRASAGRITAVIPYYAYGRSDKKDQPRVPITARLIANMLETAGADRVLTLNLHAGQIQGFFNIPVDELNALYPVSAYFRTKNLDNYTVVATDVGGEKRARDLAVRLDRPLAIIDKRRIGNAEVTEAMHVIGDVDGRNCLILDDEISTAGTIVSAVHALRQHGAREIIVSCYHPVFAGPAVDRLRALDVQEIVVTDSVPLGPEKMLPNMTVIPVAPQLGDAIGRIHSGQSVGALFQ
>NZ_CP042829.1|WP_158066885.1|1305604_1306507_+|thioredoxin-domain-containing-protein
MTSPEPGQPGPSDLPGPPPPFAVEEGSGRPVYLRRQPAWSYFLTPGAILLGALVIAAAIWWQPGSDDPASPAATPGAAAASTAPAGSPTARPQAATLLDTFLGYARSLGLDEQKLLQCLNDSANVQLINSHLQRGSQLGVSGTPTFFINNKKLVGAQPTALLLEIVEKERSANPPASLADYSQQLQQLAAQNPPSFEILPQRPDLSGAAFEGDPNARVVVAEFSDFQCPFCQRWTQTSLPELRKLVGSDVALAFLHFPITQIHPNAGNASLLAICAGAQGKFWEMHDLLFARQAEWSNLR
>NZ_CP042829.1|WP_158066886.1|1306562_1307324_+|alpha/beta-hydrolase
MPETRRSGLRIHYRVEGRGAPVVLVHGYTASGWANWIAAGWAERLAGHHTLIIPDLRGHGRSEKPHAVEAYSRQALAADVLAVMDEEGIETAPVVGYSMGGMVALELLGRHGKRFPRGIVGGMGSYFPRGRGRFAFERRHPRSLAPRRRLLDVLAYLARYWSEMDLVALNRVFRGVFADGVPVEAELLPAIRQPVLVAAGTRDVFFEPAVALARSLPNARFLPVPHDAHVSAVRNPRFIEAAAAFLRGETAPR

Crispr_ID: NZ_CP042829_4

• CRISPR_ID: NZ_CP042829_4
• CRISPR_location: 1419708-1419838
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP042829_4

Consensus_repeat	Method
TCCCTTCTCCCTCCTCCCTTCTCCCTCGGGGCGGGG	CRISPRCasFinder

spacers of NZ_CP042829_4

>4.1|1419744|59|NZ_CP042829|CRISPRCasFinder
ACAAGGCGGACGTGGGGCCTCCCTCCTCCCTGGGGCGGAAGGGTGAGCGGCGGAGGGGT

CRISPR arrays and Neighbor proteins around NZ_CP042829_4

CRISPR arrays

The CRISPR arrays of NZ_CP042829_4

>merge|NZ_CP042829|4|1419708-1419838|CRISPRCasFinder
TCCCTTCTCCCTCCTCCCTTCTCCCTCGGGGCGGGGACAAGGCGGACGTGGGGCCTCCCTCCTCCCTGGGGCGGAAGGGTGAGCGGCGGAGGGGTTCCCTCCTCCCTCCTCCCTTCTCCCTCGGGGCGGGG

>NZ_CP042829|4|3|1419708-1419838|CRISPRCasFinder
TCCCTTCTCCCTCCTCCCTTCTCCCTCGGGGCGGGG	ACAAGGCGGACGTGGGGCCTCCCTCCTCCCTGGGGCGGAAGGGTGAGCGGCGGAGGGGT
TCCCTCCTCCCTCCTCCCTTCTCCCTCGGGGCGGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158066972.1|1405847_1411040_+|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl|CDD|237864
NZ_CP042829.1|WP_158066982.1|1420913_1422260_+|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP042829.1|WP_158066984.1|1422823_1423735_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl|CDD|235695
NZ_CP042829.1|WP_158066980.1|1418573_1419224_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_098502925.1|1425810_1426563_+|DUF4405-domain-containing-protein	unknown	unknown	gnl|CDD|179639
NZ_CP042829.1|WP_158066988.1|1427491_1428100_+|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	unknown	unknown	gnl|CDD|223795
NZ_CP042829.1|WP_158066977.1|1414857_1416261_+|hypothetical-protein	unknown	unknown	gnl|CDD|224688
NZ_CP042829.1|WP_158066974.1|1412873_1413185_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066981.1|1419870_1420809_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381313
NZ_CP042829.1|WP_158066985.1|1423731_1424427_-|ubiquinone/menaquinone-biosynthesis-methyltransferase	unknown	unknown	gnl|CDD|234689
NZ_CP042829.1|WP_158066986.1|1424767_1425508_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133031
NZ_CP042829.1|WP_158066979.1|1417000_1418209_+|beta-lactamase-family-protein	unknown	unknown	gnl|CDD|365903
NZ_CP042829.1|WP_158066978.1|1416279_1416687_-|DUF302-domain-containing-protein	unknown	unknown	gnl|CDD|269820
NZ_CP042829.1|WP_158066983.1|1422256_1422739_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066976.1|1413866_1414955_+|hypothetical-protein	unknown	unknown	gnl|CDD|273213
NZ_CP042829.1|WP_158066971.1|1403971_1405285_+|hypothetical-protein	unknown	unknown	gnl|CDD|375108
NZ_CP042829.1|WP_158066987.1|1426599_1427490_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066975.1|1413344_1413641_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158066973.1|1411489_1412527_+|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl|CDD|223745
NZ_CP042829.1|WP_158066989.1|1428116_1429967_+|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|212030

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158066972.1|1405847_1411040_+|isopeptide-forming-domain-containing-fimbrial-protein	gnl|CDD|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	6.01023e-06
NZ_CP042829.1|WP_158066982.1|1420913_1422260_+|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.89597e-54
NZ_CP042829.1|WP_158066984.1|1422823_1423735_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl|CDD|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	2.28871e-96
NZ_CP042829.1|WP_158066989.1|1428116_1429967_+|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	8.42072e-07
NZ_CP042829.1|WP_158066988.1|1427491_1428100_+|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit	gnl|CDD|223795	COG0723, QcrA, Rieske Fe-S protein [Energy production and conversion].	3.56624e-19
NZ_CP042829.1|WP_158066977.1|1414857_1416261_+|hypothetical-protein	gnl|CDD|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	3.81631e-66
NZ_CP042829.1|WP_158066981.1|1419870_1420809_-|aldo/keto-reductase	gnl|CDD|381313	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B, AKR12C families of aldo-keto reductase (AKR). Streptomyces fradiae TylCII, Saccharopolyspora erythraea EryBII, and Streptomyces avermitilis aveBVIII are founding members of aldo-keto reductase family 12 member A1 (AKR12A1), B1 (AKR12B1), and C1(AKR12C1), respectively. TylCII acts as a NDP-hexose 2,3-enoyl reductase. EryBII is a mycarose/desosamine reductase involved in L-mycarose and D-desosamine production. aveBVIII functions as a dTDP-4-keto-6-deoxy-L-hexose-2,3-reductase.	4.63292e-141
NZ_CP042829.1|WP_158066985.1|1423731_1424427_-|ubiquinone/menaquinone-biosynthesis-methyltransferase	gnl|CDD|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	3.60191e-78
NZ_CP042829.1|WP_158066986.1|1424767_1425508_+|glycosyltransferase-family-2-protein	gnl|CDD|133031	cd04188, DPG_synthase, DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.	4.02683e-71
NZ_CP042829.1|WP_158066979.1|1417000_1418209_+|beta-lactamase-family-protein	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.92527e-60
NZ_CP042829.1|WP_158066978.1|1416279_1416687_-|DUF302-domain-containing-protein	gnl|CDD|269820	cd14797, DUF302, Uncharacterized domain family DUF302. These domains are mostly found in bacterial single-domain proteins and have been shown to form homodimers; they may also bind zinc. Also characterized as COG3439.	2.44485e-43
NZ_CP042829.1|WP_098502925.1|1425810_1426563_+|DUF4405-domain-containing-protein	gnl|CDD|179639	PRK03735, PRK03735, cytochrome b6; Provisional.	1.13486e-65
NZ_CP042829.1|WP_158066976.1|1413866_1414955_+|hypothetical-protein	gnl|CDD|273213	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit. This model describes the N-terminal half of the delta' subunit of DNA polymerase III. Delta' is homologous to the gamma and tau subunits, which form an outgroup for phylogenetic comparison. The gamma/tau branch of the tree is much more tighly conserved than the delta' branch, and some members of that branch score more highly against this model than some proteins classisified as delta'. The noise cutoff is set to detect weakly scoring delta' subunits rather than to exclude gamma/tau subunits. At position 126-127 of the seed alignment, this family lacks the HM motif of gamma/tau; at 132 it has a near-invariant A vs. an invariant F in gamma/tau. [DNA metabolism, DNA replication, recombination, and repair].	1.38363e-53
NZ_CP042829.1|WP_158066971.1|1403971_1405285_+|hypothetical-protein	gnl|CDD|375108	pfam17289, Terminase_6C, Terminase RNaseH-like domain.	3.1035e-10
NZ_CP042829.1|WP_158066973.1|1411489_1412527_+|Gfo/Idh/MocA-family-oxidoreductase	gnl|CDD|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.66327e-53

Protein sequences

>NZ_CP042829.1|WP_158066980.1|1418573_1419224_+|hypothetical-protein
MRRIIFALGIFSAAAVAGTWLLFTGGSPAADASPGSLDRDGRVVVWPGQADLARSEGDLLAADLLSDGRLSFEEYDRVTREFVACVEARGGQLARPLVPGPLQVYAIEFTFPPRAEGDAGAVAAASQATVDACASPTYARISAIWSQAHQPSPAQLRDAHVQLVGCLRAEGLEIPEAAAAGGSLLPFVRDNMEAFVRCSGPVSDALGMSPGYFAGT
>NZ_CP042829.1|WP_158066979.1|1417000_1418209_+|beta-lactamase-family-protein
METSPRSAGFSPARLDRITAHIERHYIEPGKIAGCQVLVARHGIPAYFRSFGFMDLERQRPMRDDTIFRIYSMTKPITSVALMQLFEEARFMLNDPVARYLPSWEHQRVWVSGDGDEMETKAPNRPVSFRHVLSHTAGLTYGATNHPVDKAYRRLGIQRGPGETLDTFVEKLGRAPLRYEPGERWMYSFATDVCGALVERISGQRLDAYFRERIFEPLGMTDTAFFVPPEKQERFAANYQRQPDKTLRLIDDPETSSYLREPSFLSGGGGLVGTTHDYWSFCEMLRRGGELDGARIISSRTLELMTRNYLPGGQDLTSLAIGAFSETANEGVGFGLGFAVTLDAARAGTLGEGDYYWGGAASTIFWVDPREDLVCIFMTQLMPSGTFNFRGQLKNLIYSAID
>NZ_CP042829.1|WP_158066978.1|1416279_1416687_-|DUF302-domain-containing-protein
MTATIEQLTFGLRRETGLPFHQAVEAVREALKAQGFGVLTEIDVQATLKAKLGAEMPPYLILGACNPPLAHRALSANPEVGMLLPCNVVVRDTGRGIVVEAMDPVAAMSIVQDPEVAEVAKQAREKIAAALAALE
>NZ_CP042829.1|WP_158066977.1|1414857_1416261_+|hypothetical-protein
MSRPALRSTSCSSASPALHWNPAPRKNSRPMPERPPRVAGVRFRNAGKIFYFHAAGLRLEPGEYVVVETVRGPEIARVVIAPDQVVVDELPREELKPILRLATEADIRRADELHRRAQELLPEARRLGEETGFPARIDAASFTLDGKRLTFSFTSEERLDYREFVRRASQQFNARVEMHQMGARDRARLAGGYGICGRELCCASWLETFPSISIRMAKDQELPLNPQKISGLCGRLLCCLSYEDEGYREMRKSLPKVGQRCSTPTGEGKVVAINILKRQVTLLVDGQRIEVGDRDLGTVVRWDPSSKSAPPPPSIAREEAIALGLIEPDADDLGDALEEPEPVFEPGPGRGRLPGGGPRRVVPARPAKPEPAPAPQPLQPPPPAPRPRRPRGAAPAPPGGPVQDQPPPPPPATGRVFRRAGARQEPPPDQPPPAPGAGTEPGQAGTGRRRRRRRGRGGGQQPPSGGD
>NZ_CP042829.1|WP_158066976.1|1413866_1414955_+|hypothetical-protein
MEQVIGHADLRRELAALAASPEPPHALLFAGPESTGRTVLARYLAMLLNCEVLHAPPAAGASLFGDALPPAAGAVGEPCGACRACRLILEGAHPDVITVAPGDTLCRPREGESHPAHPDSADIRICQVRGITELVARYPFEARTRVIIIDPADRLALYAAPALLKTLEEPPGHTVFVLITAAPDRLLETIVSRCRRIDVRPVARAEIEAGLLARGVEPRIAAEAAAAARGRPGRALDFVADPDLMGARSRILGRCAQVAAGGIPARFDYARSLAERWRGDQAAVRFELECWEAFWEERLRRAAAAGARQELAGLLEALRAIAAVREHLLANVQARAAFDLMLLRFPRVTLEPSTEEELPAHA
>NZ_CP042829.1|WP_158066975.1|1413344_1413641_+|hypothetical-protein
MSEPLPRPARCDALPEHTDYRDTGCDLAPSCLACPLPQCRYDLPGGLAAMLRSRRDAAIADAVRRRHLPIDDVAEMFGLSRRSVFRALRRVERPGRQQ
>NZ_CP042829.1|WP_158066974.1|1412873_1413185_-|hypothetical-protein
MAIERRTKGEPGARRRRPVSERDPLAAAWNVIDALWREECDPPRAQAIIAALRVVFAAGQAPLDRDRTLREAEVLGLAMHGLPPRDAEEAGLAEELFGRRYWE
>NZ_CP042829.1|WP_158066973.1|1411489_1412527_+|Gfo/Idh/MocA-family-oxidoreductase
MSTIRIGLIGAGANTAAQHIPGFRRIPGVEIVGVVNRTPESSRRVADQFGIPRVFESPEALCADPEIDAVCIGTWPYKHRDYTIMALEAGKHVLCEARMAMDLPEALEMLAAARRHPELVAQLVPAPFDFRLGPTITRLIAEGALGEVREVTVRVLNGQGLDPHAPLHWRQRRDYSGRNVQMFGIYVEIIERWLGRHAGSVTADGAILIPERRDPETGQMAPVTVPDTYVVCGELARGARITYHLSTMAAGAEANGIAIHGTKAVLRWHPGDTAEIVPFGQQHGHAIEPDPGTDRGWRVEEDFIASIREGAPVRLTNFEDGVAYMRVVDAAHRSWEEGRRLPLGE
>NZ_CP042829.1|WP_158066972.1|1405847_1411040_+|isopeptide-forming-domain-containing-fimbrial-protein
MTLALYGKSRRRQGALLTAALLAVIIATIGALSAITSAFAHSATVTGTAVCTSGGWKVDWKITGDTPSKNMHITSFTVTGGSTTTSPTPNPVPQGTNPQTATAQTTGIALSVSSVTATAQVYWIKNDGSDRYPASGTKTYTKTVQKPSNCATIIIKKVVAGQGADPNATFTASVDNEDEPEGDASNLSFSQNSPYTHVFGGHGSDDDFIVTETGVASGYEVVGSWEGEGNATCPQVGSNDWDTSTGGDNRKNQQKQKIEGLGSATKTVCFLNVKVTAKTCKDLGLQLIDKFNLNGNSYNWETDSGGQQVTIGAGSNATGGNWTSTVSIGAVIVKGGSGPVAYKVFPFPPPYPADTYAGSFDNSGLINWGGNTPAVSHVEFCQGTTTPKGTLIVGKVKDPSAGVPNADGSQFSGTATNQGNAAVINWGPITFSSFATLSNTPAGTYTLAETSTQNGWTPYGWASGSLNQQGQPVCPSEKSSYTAGSTKSNVQVNSNATTVVCVMNTKTAQTPSISKAKASDGYSGGYAYWEIAVVNPENIAQNVRIDDANVTFVSVTNGSCSDSDFSDGSITCSVNANSTMTVKVKRAITTTCHEQTVNNTATVYLLPAVGGNPVKIGDAGGTDATAYTIPGDESKCGLPTITKTANTSQTSDPNAISWTVTVTNPNGTNGIQRTVWIKDPNVTVVGNPTFTGGALCPIPTNSSFETELNGSGVPCTMPAGSSITFTVKPEDQPTRTCEPQSFTNTAYLYIGSQTSQPVTAQGDTITLSGDPSLCTRNVTICKVLENNNDGIVRSGTISFDVRPQSSSPIAVHISNVTEGQQTAPCTTVQVPANKSFDVVEWASRPTGWNGDESGYPQYQIGGGTKVSNNTTTTIAAGNDPVTITFYNKEKLPEIKVRFQKVICPNFSDVAINPGGGAYDIGKPVFPGGGLQGQLNQTAAPPDGNDIVTPSNDGRSSNCHLWGGPGGPGESGDWNFYLKSKDGSSTLATIGHPAGQQYGEPTLTAEQLQLALQASTLRVEEELRPGYAFAGLKCWKDHLNQDNWEWIDFSNGLPGPNDTVWCIAYNVPFKTITIHKTFFGDSSITSEDYPTFTLSPAPWTGWEFNQYCTVITAGTPYGGGVGVAWSCTVPASWAGSVTETPAAGWEICPATFQVGNGGIPVTYDYSFLNCKKSSIVVKKVVTNVENDTTQFTVTLSDGSQSSQTGQIAEWNGSGPVNATFGNLSPNTTYTITEGPQNGYQVLGWALANENGTCPAQPANTGAVAQVAPKPGASAVVCFYNERFGNVVVDKAVSTNTATPGVPFTWTITVSVADGPTSSALTLTDTLPPGFTYGSPSATSPLSCTLTAGQLSCTLPQNTPIGTYTVTIQATAPTGTFTICGGHTNTVSFSGAGIEGTDSATVTVGCVASDGTILVRKVVLGQPGDTTQFTAGLTGPGIEGTATQPFSQQLVGIFPGLAAGTFTVSEQPQGGYQYAGWAYGTIVGNQVQCPAQPTSSAASTDVTLTNTSPLAAVCFYNEARVTIRVEKVLNVIGFTNPGPGWQFTLTGCGITPQTKTTDANGVAEFTDLPPAIGCQYTVTETVQAGWTPQFVSQTAAPTQGGQGVTLKFLNIRVYDPPCVDPSDQRCQPPVTTTPPTTPPTTPPTTTTPPTTPPTTVTPPTNTPTPTPTNTPVTQVAGEKTPGPGASPTPLAPSTGYGFGGAQGGMSLLLVLAGLISLSLGLGFIALGRRTNR
>NZ_CP042829.1|WP_158066971.1|1403971_1405285_+|hypothetical-protein
MAAPLLRPYQRRVFLPLCRGLLTVRHEQFTLLMPRQSGKNQLAATIVTALLLAHARRGGSIVICAPTFRPQAAISLERTRAILEPAARRARLQPQIDEHRIRCGNAEAVFLSASGHAQVAGHTASIALLADEAQDIDPDWFDRQFRPMAASTGAPALLFGTPWDGDSLLERAIARNAGRTAAGLPLHYTVSWQEVARDVPIYGQYVERERQRLGAQNPLYLSQYELIASRTSARLLSAESLARIEGGHALLEGPRAGERYVAGLDPAGTGPDATVLAIGRIQPGRRLEIVAFETWQGADLAGFAPRIASIAARWGLERLAIDATGLGQPLAAALEPHLGRALLPVAFSQQTKSALGWELIAACETGRLALPAPAGGEPDLRQCWDELRACRRSLRIGGILHWEAPAGQHDDFVAALALALHAAGALPQERTARGRRS
>NZ_CP042829.1|WP_158066981.1|1419870_1420809_-|aldo/keto-reductase
MEFRHLGRSGLEVSLVGLGCNNFGIRCDFEQSKAVVHRALDLGITLFDTADVYGGGGRSEEFLGKILKGHREKVVIATKFGMKMGEGPHRMGASRKYIMQAVEDSLRRLDTDYIDLYQVHRPDPHTPIEETLRALDDLVRQGKVRYIGHSNFAAWQATEAHFVAQRLNVTPFISAQNEYNLLDRRIEAELVPACNAYGLSILPYFPLASGFLTGKYRKGEELPAGTRLANAGPMAARVLTDRNFAILEKLETFAQARGKGMVDLAIGWLASQPHVGSVIAGATRPEQVDQNVAAAAWRLTADELAEVDAITR
>NZ_CP042829.1|WP_158066982.1|1420913_1422260_+|MFS-transporter
MLELPAPPAPAGGPFASLRYQQFRWLFASNIAFFFAMNGQFVVRSVLAYRLTGSELALGLINLVVAIPMLVVSPFGGVVADRVEKRRLIMTGQAVLVASELAVFVLLVLGLLEFWHLLAAVFVMGCTFPFIMPARQAIVASIVGRQGMANAMALQMGGMNAARVVGPVLAGFIIAVAGVRWVYAVAVTLYALAFFSMAHVHRAPPAEGARGRPVWSELLGGLRYAAGDPPVRALLVLSIIPILLAMPFQALLVVFADDVWHVGAGGLGVLQAAAGLGGIAGSFWVAFTSASPRKLRLMMSTLLAFAGSVLLFSISPWFLLALPLVFAADVFASAFTTTVNMLIQVLIPDEVRGRVMSLMMMTFGLTPLGTVPVSALAEALGAPAAVAVASVVTIALSLAVLAASRSLRGIDATVARALEAEAAAQPGFRPGMPPGAPAWAGRAPADAG
>NZ_CP042829.1|WP_158066983.1|1422256_1422739_-|hypothetical-protein
MTSSGTPALTDLQQSALAGAERTQNGLLVAQDALLAALRRPQPARERAWAERVGQELAKVVDALREHRLEVERADGLYAEILRDAPWTEPRLRQLAAQLRRLEAEAADLQVEVRRVEEGDLQGLHTIRHDAERMLQSLRDLLSKEADLIYERFEQPPAAD
>NZ_CP042829.1|WP_158066984.1|1422823_1423735_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MTAAAAGARPGRLQAWRMAARLPTLTAAAAPVAVGTAAAIRDDAFALVPALAALFGALCLQVGANFANDVFDHERGADTPDRLGPPRASQLGLLTPRELKAGMAAAFGLALLAGVYLAWVGGWPIVAVGLASIVAAVIYTGGPWPVGYHALGDLFTFVFFGLVAVMGTYYVQAGELTWFSFWAAVPVGATVTMILVVNNLRDIPTDRRTGKVTLGVVLGDRGTRWWFAALFGVTLAVPAGATVTGDAPLGLVVAAVGIADRRPLLRQVLGGTSGRELNPLLKQTARSALVYAVFWAAAIAIQP
>NZ_CP042829.1|WP_158066985.1|1423731_1424427_-|ubiquinone/menaquinone-biosynthesis-methyltransferase
MAHLPPPEEKARAVRAMFDRISPSYDRVNRLMTFGADQRWRMALVERLGVSPADVVLDLACGTGDFVELCRARGALAVGLDFSRGMLEQAAARSGETSAWVQGDALRLPFRDGVFTVAVSGFALRNFVAIPPVLAELARVLQPGGRLGLLEVDRPRNPLVAAGHRFYFQKVVPRVGGLLADRSAYHYLPESAAYLPEEAEMVRMLREAGFHRIRKQRPMFGAIQSITAERQ
>NZ_CP042829.1|WP_158066986.1|1424767_1425508_+|glycosyltransferase-family-2-protein
MTAPRPRVDVVIPCYNEVKVLEQSTLATLALFDRNPQYDWRLVIADNGSTDGTSELARRLAAEHPRVHALVLEVKGRGLALREAWLQSDADIVSYMDVDLSTDLAHLPELIALVAERGCDVAIGSRLARGAKVKRQLKREITSRGYVALIRLTFPRLRITDAQCGFKALNRRAVQLIVPQIENRMWFFDTELLILAHQAGLKICELPVRWVEDPDTKVKIVSTAIEDIRGLLRMRFRRRRPGAPAA
>NZ_CP042829.1|WP_098502925.1|1425810_1426563_+|DUF4405-domain-containing-protein
MAVEAPPKPTLADKIYDRLFHNYVWKSIFRTGYPNTPRNQMLIVATNVFLHLHPTRIHRTHVKITHTYCLGGLSFFMFLGLTVTGILLMFYYVPSVERAYLDIQNITTTVQFGQLMRNMHRWMAHAMVILVFLHMMRVFYTGAYKPPREFNWVVGVILLVLTFLLSFTGYLLPWDQLAFWAITVGSEIAGSAPVLGPKTRFWMLGGFEVGPNALIRFYTLHVIGLPLLAAIFMAVHFWRIRRDGGLARPL
>NZ_CP042829.1|WP_158066987.1|1426599_1427490_+|hypothetical-protein
MATAVVARPVARPQPRARDEEVLVWPDLIFIEFISALVFTVGLLILSTFMNAPLLDQANPDVTPNPSKAPWYLLNLQELLLHMNAAMAGIIVPTVWLILLAAFPYFDRDNEGQGAWFATENAWRITIISGIVAFVGTWLLILWDTGKIAYFLHSWFGLSGGDTLRFLENVRSMQSQLPWPEWSRSITYLPFELRILDGTGRGGPTTFQHLDFPGWLVEQAIPITALVGLPSLLIYSLWRSGLVVSRRDALLALFTGFVVVFGVLTLVGTAFRGQGQELVMPWQLKVSEGIPGQEAH
>NZ_CP042829.1|WP_158066988.1|1427491_1428100_+|ubiquinol-cytochrome-c-reductase-iron-sulfur-subunit
MAQAQSAPRATGRIERARQIEARKLARRSFLRVSAFSGLALFTGGLLASFLGFFNLRKPTGFGGTVTVTADRIPRPGADPVRIPEGKFWLVNLNGPEGDVLQVGGTGGILALYWKCPHLGCTVPWNPAFNGATVNFPGIIGWFRCPCHGSTYSKAGVRVFGPAPRPMDTMAIKVNGDGSVSVNTGQITAGAIDNPLRAIPYS
>NZ_CP042829.1|WP_158066989.1|1428116_1429967_+|LysM-peptidoglycan-binding-domain-containing-protein
MNTQKQIILIVALLFMTVGGCAAYAAIDLPVRADSQSQWTLDQSRERGALLYANNCRTCHGNRGEGGVGLPLDTPELKNQDPLVLAANKAMIRRTLYCGRAGTRMPAWLNTNGGSLNAIQIEHLINLITAPEDTEVDGVPTSKWWLEAEHFAHNLNTELSALVGGDTLSTIAKAHGIGYREIFAANGNRNVDEILPKNTRVQIPGFKARPDGYIYTVYKDNETLRKIADSQLVGPVIIADLNGLKYTFEEKRGVATLQLLTEDGKPRAGLFPGETLKLPEGATYIVAAGDTPASIAQQHGIAVADLRRLNPTIFQGVNDTDPLEHRRQLNLPSLVYVAREGDTLQSIAEAHGIKDVVGLAQLNNLDAGAPVVNPGQEIRLPSGTRYIVGLADTWESVARSHKTTAAELARANGGDPATPLSQDVVLQLPKIDRYTVRGQTLEEVAKGFANVTAATLAEANGIQPNSILAIGTTLKLPDSAWGTAPPDAINPGTACVQYAVPNAVFQTLPGLGTPVSVKKPENFSTDVRFEAHANDWTIVADGQAQQPNLGGVKVKPGTTITFTSIVGLHNIVFNGEVQGADLKQGDTRQITMNTPGEYKVTCDYHPPMLGYIWVEQ

Crispr_ID: NZ_CP042829_5

• CRISPR_ID: NZ_CP042829_5
• CRISPR_location: 2043180-2043358
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: DEDDh

Consensus repeat of NZ_CP042829_5

Consensus_repeat	Method
GGCGGCAGCGGTGGCTGCGTCGGCGTCGC	CRISPRCasFinder

spacers of NZ_CP042829_5

>5.1|2043209|52|NZ_CP042829|CRISPRCasFinder
GGTCGGCTGCCCCTGCCCGCCGTTCCCGCCCGCCGGCGTCGGCGTGGCGGTG
>5.2|2043290|40|NZ_CP042829|CRISPRCasFinder
CGAAGGAGAAGGCGACGGCGACGGAGAAGGCGAGGGCGAT

CRISPR arrays and Neighbor proteins around NZ_CP042829_5

CRISPR arrays

The CRISPR arrays of NZ_CP042829_5

>merge|NZ_CP042829|5|2043180-2043358|CRISPRCasFinder
GGCGGCAGCGGTGGCTGCGTCGGCGTCGCGGTCGGCTGCCCCTGCCCGCCGTTCCCGCCCGCCGGCGTCGGCGTGGCGGTGGGCGGCAGCGGCGGCTGCGTCGGCGTCGCCGAAGGAGAAGGCGACGGCGACGGAGAAGGCGAGGGCGATGGTGTCACCGGCGTGTTCGTCGGCGTCGG

>NZ_CP042829|5|4|2043180-2043358|CRISPRCasFinder
GGCGGCAGCGGTGGCTGCGTCGGCGTCGC	GGTCGGCTGCCCCTGCCCGCCGTTCCCGCCCGCCGGCGTCGGCGTGGCGGTG
GGCGGCAGCGGCGGCTGCGTCGGCGTCGC	CGAAGGAGAAGGCGACGGCGACGGAGAAGGCGAGGGCGAT
GGTGTCACCGGCGTGTTCGTCGGCGTCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158067622.1|2044511_2045537_-|UbiA-prenyltransferase-family-protein	unknown	unknown	gnl|CDD|260126
NZ_CP042829.1|WP_158067623.1|2045431_2045911_-|YbaK/EbsC-family-protein	unknown	unknown	gnl|CDD|239825
NZ_CP042829.1|WP_158067624.1|2046935_2047406_+|holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl|CDD|234610
NZ_CP042829.1|WP_158068292.1|2034134_2035364_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	unknown	unknown	gnl|CDD|181774
NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl|CDD|274043
NZ_CP042829.1|WP_158067626.1|2048981_2050250_+|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl|CDD|274452
NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193
NZ_CP042829.1|WP_158067625.1|2047402_2048962_+|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl|CDD|238576
NZ_CP042829.1|WP_158067621.1|2044105_2044489_-|iron-sulfur-cluster-assembly-scaffold-protein	unknown	unknown	gnl|CDD|132460
NZ_CP042829.1|WP_158067614.1|2032412_2033648_+|hypothetical-protein	unknown	unknown	gnl|CDD|273167
NZ_CP042829.1|WP_133117616.1|2037186_2037981_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067617.1|2038637_2039969_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP042829.1|WP_158067619.1|2041384_2042854_+|TldD/PmbA-family-protein	unknown	unknown	gnl|CDD|223389
NZ_CP042829.1|WP_098504505.1|2045907_2046798_-|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase	unknown	unknown	gnl|CDD|184560
NZ_CP042829.1|WP_158067613.1|2031546_2032449_+|hypothetical-protein	unknown	unknown	gnl|CDD|373073
NZ_CP042829.1|WP_158067615.1|2033670_2034138_-|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl|CDD|234606
NZ_CP042829.1|WP_098504514.1|2035378_2035975_-|riboflavin-synthase	unknown	unknown	gnl|CDD|293928
NZ_CP042829.1|WP_158067628.1|2051952_2052372_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067616.1|2037977_2038634_-|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|176648
NZ_CP042829.1|WP_158067618.1|2040035_2041481_+|metalloprotease-TldD	unknown	unknown	gnl|CDD|182685

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042829.1|WP_158067616.1|2037977_2038634_-|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	3.7e-21	70.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158067622.1|2044511_2045537_-|UbiA-prenyltransferase-family-protein	gnl|CDD|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.78548e-90
NZ_CP042829.1|WP_158067623.1|2045431_2045911_-|YbaK/EbsC-family-protein	gnl|CDD|239825	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS). While ProX and ProRS-INS hydrolyze misacylated Ala-tRNA(Pro), the E. coli YbaK hydrolyzes misacylated Cys-tRNA(Pro). A few CD members are N-terminal, YbaK-ProX-like domains of an uncharacterized protein with a C-terminal, predicted Fe-S protein domain.	9.88392e-52
NZ_CP042829.1|WP_158067624.1|2046935_2047406_+|holo-[acyl-carrier-protein]-synthase	gnl|CDD|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	2.19914e-40
NZ_CP042829.1|WP_158068292.1|2034134_2035364_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	gnl|CDD|181774	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II.	0
NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD	gnl|CDD|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	4.93523e-124
NZ_CP042829.1|WP_158067626.1|2048981_2050250_+|beta-ketoacyl-ACP-synthase-II	gnl|CDD|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	4.49619e-156
NZ_CP042829.1|WP_158067625.1|2047402_2048962_+|NAD(P)H-hydrate-dehydratase	gnl|CDD|238576	cd01171, YXKO-related, B.subtilis YXKO protein of unknown function and related proteins. Based on the conservation of the ATP binding site, the substrate binding site and the Mg2+binding site and structural homology this group is a member of the ribokinase-like superfamily.	3.45982e-75
NZ_CP042829.1|WP_158067621.1|2044105_2044489_-|iron-sulfur-cluster-assembly-scaffold-protein	gnl|CDD|132460	TIGR03419, NifU_clost, FeS cluster assembly scaffold protein NifU, Clostridium type. NifU and NifS form a pair of iron-sulfur (FeS) cluster biosynthesis proteins much simpler than the ISC and SUF systems. Members of this protein family are a distinct group of NifU-like proteins, found always to a NifS-like protein and restricted to species that lack a SUF system. Typically, NIF systems service a smaller number of FeS-containing proteins than do ISC or SUF. Members of this particular branch typically are found, almost half the time, near the mnmA gene, involved in the carboxymethylaminomethyl modification of U34 in some tRNAs (see GenProp0704). While other NifU proteins are associated with nitrogen fixation, this family is not. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	7.09157e-53
NZ_CP042829.1|WP_158067614.1|2032412_2033648_+|hypothetical-protein	gnl|CDD|273167	TIGR00601, UV_excision_repair_protein_RAD23_homolog_A, UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0.000462904
NZ_CP042829.1|WP_158067617.1|2038637_2039969_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.55283e-57
NZ_CP042829.1|WP_158067619.1|2041384_2042854_+|TldD/PmbA-family-protein	gnl|CDD|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	5.28355e-113
NZ_CP042829.1|WP_098504505.1|2045907_2046798_-|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase	gnl|CDD|184560	PRK14190, PRK14190, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	4.8585e-129
NZ_CP042829.1|WP_158067613.1|2031546_2032449_+|hypothetical-protein	gnl|CDD|373073	pfam14446, Prok-RING_1, Prokaryotic RING finger family 1. RING finger family found sporadically in bacteria and archaea, and associated in gene neighborhoods with other components of the ubiquitin-based signaling and degradation system, including ubiquitin, the E1 and E2 proteins and the JAB-like metallopeptidase. The bacterial versions contain transmembrane helices.	3.20509e-07
NZ_CP042829.1|WP_158067615.1|2033670_2034138_-|6,7-dimethyl-8-ribityllumazine-synthase	gnl|CDD|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	1.49106e-72
NZ_CP042829.1|WP_098504514.1|2035378_2035975_-|riboflavin-synthase	gnl|CDD|293928	cd00402, Riboflavin_synthase_like, Riboflavin synthase and similar proteins. Riboflavin synthase catalyzes the dismutation of two molecules of 6,7-dimethyl-8-(1'-D-ribityl)-lumazine (DMRL) to yield riboflavin (vitamin B12) and 4-ribitylamino-5-amino-2,6-dihydroxypyrimidine (RAADP). Riboflavin synthase is a homotrimer and the catalysis does not require any cofactors. Active sites are located between pairs of monomers, but only one active site catalyzes a reaction, the other two sites are inactive. Humans do not produce riboflavin synthase, and thus it is a good target for antimicrobial agents. This family also include lumazine protein (LumP) from bioluminescent bacteria. LumP serves as an optical transponder in bioluminescence emission.	4.20086e-91
NZ_CP042829.1|WP_158067616.1|2037977_2038634_-|3'-5'-exonuclease	gnl|CDD|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	1.81817e-21
NZ_CP042829.1|WP_158067618.1|2040035_2041481_+|metalloprotease-TldD	gnl|CDD|182685	PRK10735, tldD, protease TldD; Provisional.	1.41397e-154

Protein sequences

>NZ_CP042829.1|WP_158067619.1|2041384_2042854_+|TldD/PmbA-family-protein
MDLRQGWPVRPRRRRHADGPRLRHHRWGHEAVTARAAEGISALDLARRAVQLARRAGAEQCDAIVVTGSESTVAVRLGEVEKLIEAGSLGLGLRVIIGGRTAVCSTSDLTPAALEQFAAETVELAAISAPDEFAGLPDPSLFGRPADAAALGLYDERIEALSTDEKIRLALAAEAAAFAADPRITNTDGASLSTHVGEVALVNSLGFEGSYPATSISLAVEAIADDAEGKKRNGYWFSAERSLSRLGDPEEVGRTAARRAVDQLGARKPATTRVPVVFEPMMAISLLRHLAGCATGDALYRGATFLAGREGQPLASPLVTIVDDPRLPGRFGTRPFDGEGVATRRNVLVETGTFRGFLFDCYTARRLGRTTTGSASRSLESAPSPSSSNLVLEPGSLAPGEILAGIPEGLYVTALMGAGFNPATGDYSRGAAGFWIENGQLSYPVTEVNVSGNLAAMLADIDGVGSDLTWFGSAAAPTVRIREMTVSGR
>NZ_CP042829.1|WP_158067618.1|2040035_2041481_+|metalloprotease-TldD
MPDPAAAALQFFRDRFAIDPAVTSTLLSVALSRGGDFAELYFEHRTNSAITWEDQHVRSATRTVSQGLGVRVVRGEAIGYACTESFDMEAMRRAAETAARISAGERTPPPIDATPFLVGTSHYDFDHPLVAEPAAAKVALLERADRAARSYDPSIARLDASIGDELKYILIARSDGKLIGDVQPLIRFNVSALSQRGESRQVARQGGGGRMGIEYFEQVTTPEQLAREAARQAVLQQDAAEAPAGTLPVVLAAGDSGVLLHEAVGHGLEADFNRKGTSNYTGRIGQPVASPLVTVVDDGTIAASRGSINVDDEGNPTTRNVLIENGILRGYLHDEISARHFGVAPSGSGRRQTFKDYIMPRMTNTFMLPGDDTPEDIIRSVDRGIYAVSYSGGQVNISNGDFVFSVTEAYLIENGRITTPLKNVMLIGNGPDVLSKVTRVANDYRLSDGRWTCGKDGQSVPVGVGMPTVLVSGITVGGTKL
>NZ_CP042829.1|WP_158067617.1|2038637_2039969_-|MFS-transporter
MERWAVIVQDCGGGRSCARSSRLSSQAVAGTERSPRAGGLTAPGRPLASLRHRDFRVLLFSTMALQVGSWVQTIGQGWLVVNDLGGSATNLAVVALLRGAFLVLVSPFGGVIAGRYERRGLLMVYTAVSAAIAVLLAVLVSTGSIELWMVYVLAALAGIVEALAGPIRSLLVFDTVGPEEMTNAVALNALGGNAMRVIGPAIGGALIGLIGTEGTFEVQAGCLVVSLVLTARLRRFEPELREGNENAFVSVGRGLAYVVRDRPMALIVGMAVLPSVLVYPYVSFLPVFAKDVLHEGAEAYGFLAGAVGLGSLAGGAIVAATSNRQRLGPAMTWACLFYCLSVAGFTFMRELWFAVGALVVAGVFHSIYAAFNASLMQMKAAPEFRSRVVALQTVTWGLTPFAGLLMGAMIDRWGAPHTVLAWMLAAAGLTLALALGSRELRRV
>NZ_CP042829.1|WP_158067616.1|2037977_2038634_-|3'-5'-exonuclease
MVALQSVLSMGLRRLDAEGRPTGEPAELTDLAAAAALYVVDLEMSGPNPQVHEILDIAGVRAALAPGLPEEESWSARVRPKRIGNAVPAALKVVGYSPKAWKTALDLEAAMERFATVGRDAVVAGWGMAQDLAFLAEAFRALGSPWPFALAALDVQVIARALLRGNGEVDRFNLGHVADRLGIGRMGEHGALADAYATYDVLVKLVERVARLTAERER
>NZ_CP042829.1|WP_133117616.1|2037186_2037981_+|hypothetical-protein
MASSNISWRHPRQLALTAAALAAVIIAAGALLWNARSGSSEQPPVSAAPTPTPGLLSGVPADPVGALSRLQQEAPAAASALDGLLRGDPAATLSRLRTLSVACETIMVRGETDCTRLGVAPGTVIRKVTLDRRPNGFWADEADARRAVEYLLAGPVPRLDLLATMADGTTLAILGIEPRDPFDVPGGPVQASRPENRVARLQVHIAPDGTILGIAQATFSTPPLEVIRYDEHNGIGRYTIRYASPELRQQEADFAAGLADASRP
>NZ_CP042829.1|WP_098504514.1|2035378_2035975_-|riboflavin-synthase
MFTGIIEEVGEVVEAGEGTLRIRAPLILQDTKLGDSIAINGVDLTVAEIAGDTFFANLMPETYRRSNLGELRPGDRVNLERSCRPTDRLSGHIVRGVVEGTGTIESFMPEGDAVIVRIRAPRELLKYMVVKGPVCIDGISLTIIAKDAESFSVSLVQYTQEHTNLVGRKPGDRVNLETDILARYVDALLEARAQEAGQ
>NZ_CP042829.1|WP_158068292.1|2034134_2035364_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II
MMATVPEAIEEYRRGKFVIITDDEDRENEGDLCIAAQFVTPEHINFMAKYGRGLICCSLTEERCDQLQLPLMVDPRSNTSGFGTPFTVSVEARTGVTTGISAADRARTVQVLIDPATRPEDLARPGHMFPLRARKGGVLVRAGQTEASVDLAKLAGLYPAAVICEIMKMDGQMARMPDLKRFARRHGLRIVTVNDIIRYRLRTERLVTRVAETRLPTPYGEMMILGYKAEGQPDEHVALVKGEIDPDRPTLVRVHDQCVTGDVFGSLRCDCGEQKEKALKMIAEEGGVFLYMRQEGRGIGLHNKLRTYELQERGLDTVDANLALGFPADRRDYGIGMQILRDIGVSKMRLITNNPAKRAGLEAYGLEVVERVPIVTTPNPHNIRYLETKRQRMGHLLDGLESLVVEGGS
>NZ_CP042829.1|WP_158067615.1|2033670_2034138_-|6,7-dimethyl-8-ribityllumazine-synthase
MSRVLEGALDGAGLRVCVVVSRWNEFVTRRLLEGAEKVLRERGLADGDVTVAWVPGAFELPTAAKWAAASGRYDAVVCLGAVIRGETAHFEYVAGGAAEGIRQAAQETGVPVIFGVLTVDTVEQALSRAGGKDGHKGEEAALAAIEMANLRRLLL
>NZ_CP042829.1|WP_158067614.1|2032412_2033648_+|hypothetical-protein
MGGRKLPHTGALIAPLLAALALVTGGCGCGTAVDIVPPSETPAPAATPTPAPTPSPTPDPIGPPPRDIAEARQALERLQRTTGPCSPTVAERWGLSCIEADIDGDLAPDSAILLPLPQPAPVGPYPGVVFVNLTTAPGFVALSPPGAADTSILGRAIFSVADRDGRPRPEVAFLENFCTATRCATLVRVYTWDGTTWRDIGPADQGITGVDRVAFEGAGASTAIVIHAAPSSSLAAGPTRGGTYRYTLSGGRFSALRVDLDRPVFLFHAILDADDRFVRGEWEAAVAIYEAAIADRNLRDWKAENGRGDSRDALVTYALFRIAVATAASGADPNPAIDRVIREGREQVFLNAAEAFRKGYQERGSVVGGCLEATRYLATTGPGIDTPGYVQRLLDHGYANPQYTYRDICPL
>NZ_CP042829.1|WP_158067613.1|2031546_2032449_+|hypothetical-protein
MSVQQRFCPLCDRAFEDGEAVLRCTGCGVLHHPGCWVANNGCATREPHQSSPQAMAYGGAGRPPGEPAPHPGEGTRVAPPPPPPPPAGPLQSGPQGSEPEPVIGTTFVRRQLPEDVAPPVGSGPRRYQPPRDEPLPRKPLPRIYERHRWLAYWYIPLAVLLAAGVAFGIIWAAGRLTGSEPASPGPSPTAVPAASPTPTAPAFSTPAPTGSPALPTPPATASVGPGRFTAGQRLVVTGTGDCLNVRTNPGTENDAIVCLQDGAEVRVTGGPQQAGNFTWWKVQTTLGEGWAVENYLTPAP
>NZ_CP042829.1|WP_158067621.1|2044105_2044489_-|iron-sulfur-cluster-assembly-scaffold-protein
MPGYSELVRDHFEHPRNAGVLEDPDGIGERANPVCGDRMTVMIRVADGRVAEVRWQTRGCPAAIATSSFASELVRGWTLGQVRELTREAIAEAMGGLPRDKVHCSVLAADALKAAIADFERRQAAGG
>NZ_CP042829.1|WP_158067622.1|2044511_2045537_-|UbiA-prenyltransferase-family-protein
MGGSGSAERGVRGRRRGAGCGDRRAVGGHREGAGVSAEPRRQGEGLPALVAAMRPYQWPKNAVVFAAFVFSAGEAWTPGDPGTWWPLLWRSLVVFGLWCLAASATYLVNDVRDREADRLHPRKRFRPIARGAVSPRTAVAAAVVLGAAGVAGAAALDAAAGLVLAGYLGAMTLYSLGLKRVAILDILLLSAGVVGRAVSGAAAIEVDISPWLYVCSSFAAFFFATTKRWAEFRQLGAEAARHRPSLAAYNAEVLELMLGVSAAGALLSYSLYTIESARVPDDGSMALTIPFVAFGLFRFLLLMSGPRQADAPDRVLFTDPQLLLAVAGFTAAAFAVLVAHR
>NZ_CP042829.1|WP_158067623.1|2045431_2045911_-|YbaK/EbsC-family-protein
MTPPERVAAALAALGLPAEVRTFPQSTATAEEAAAAVGCAPGQIIKTLFFLADGRPTMVLMAGDRQVDTAALAEILGVSRKRLKMGTPEEVRQHTGYEVGGVAPVGWPTKPDVVIDDSLRRFATAWAAAGAPNAVFAAGVEALAAAIGGQWAAIAKERA
>NZ_CP042829.1|WP_098504505.1|2045907_2046798_-|bifunctional-5,10-methylene-tetrahydrofolate-dehydrogenase/5,10-methylene-tetrahydrofolate-cyclohydrolase
MPAKLIDGAAIAAEIRAEVAREAAALREAGVTPGLAAIIVGDNAASISYVSMKTKACAEAGIFSETFRLPATATQDEVIALVRQLNADPRFHAILPQLPLPPQVNELAVIDALDPAKDADGLHPVNLGKLLRGELDGAIPCTPHGVVELLLRTGNDPAGKHVVVVGRSTLVGRPLAVLLSNKARGGNATVTICHTATPDLAEHTRRADIVVVAAGRAGTLTKEMVKPGAVVIDVGVNRVDAPDRPSGYRLVGDATLDVREVASWVTPYTGGVGPMTVAMLLVNTVKAARRALEGRG
>NZ_CP042829.1|WP_158067624.1|2046935_2047406_+|holo-[acyl-carrier-protein]-synthase
MPDDTPAQRPRKFAHGIDVIETHRIADVIARHGDRFLNRVYTPDELAHCRGRIPELAVRFAAKEAVMKALGTGIRGVGWKDIEILPNRRGKPLVFLYGRGARRAEEIELRGLEVSMTHLADLAIASVVGERALTEAEDTPRRGDSALRLIREKGLR
>NZ_CP042829.1|WP_158067625.1|2047402_2048962_+|NAD(P)H-hydrate-dehydratase
MKLVTAAEMRQLESAAIAAGSSEAQLMEEAGLAVAQESWMLLGTLEGRRILVLAGPGNNGGDGLVAARHLYDWGAEVAVYFPKGHRDASRLEELRAREIPLLMGDDDPEGRQLAAQLAAADLVIDALLGIGQRLPLDPADPIARALAALASTRSSYQPPKIVAVDVPTGLDCDTGAVDPLLVRPDITVTFGLPKVGMYQLPGSDAVGRVQVIDIGIPKDAVDAVPLELITSRWVRQHLPARPADANKGTFGRVLVVGGCNRYRGAVALAAAGAYRAGAGLVTIATLEDLARDLAAAIPEATWLPQPAGPDGSLSGEAAIALRAEWAAARAAVIGPGLSLTDDTRAFTWAALPDTADCAGGVVVDADALNALAAMDDAPARLHPRAILTPHPGEMARLLRTTVPEVQRDRLGAARAAADRFGCTVVLKGAHTVVAAPGGRAALCPFANPLLATAGSGDVLAGIIAGYLAQGADPFTAARLGVYLHAAVAEALEAEYGRAGLLAGEIAARLPRIVRDLTQS
>NZ_CP042829.1|WP_158067626.1|2048981_2050250_+|beta-ketoacyl-ACP-synthase-II
MTNHASNPARRVVVTGLGIVSPLGQNACDTWNALVEARSGTRRITLFDPAGFDSQVAGEVPDFDPAAYMDRKVARRADRATQFAFVAADEALAQSGFRPAPDDGSEVAVIVGTAIGGITTLSAEFETLYTKGPGRVSPFLMPMMLADMTSGQLSIRIGARGVNYCLVSACASGADSIGEAANIIRRGDAEVALAGGTEAPITPIVVAGFASSKALTTANDDPARASRPFDARRDGFVLAEGAAVLVLESEEHARARGATILAELAGYGATSDAYHITQPDERGEGAARAMQMALRQAGLQPDEIDYLNAHGTSTPMNDRLETLAIKRVFGEYAYDLPISSSKSMTGHLLGAAGAVEAAICVLALQKQIIPPTANYEVPDPDCDLDYVPNVARPARLEAVMTNSLGFGGHNSSLIFRTYRAAP
>NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ
MTQLVGAQPPRWRLRDPYAHQNGIPRYPPVLATVLAARGITTRQQAEAFYRPHLLPDHDPLLLPGMADAILRVDRAIREGELIALYGDFDVDGVTSIAILHEGLAPLGARTLPYIPDRFTEGYGLNFGAIRSLAAAGATLLVTADCGISSVAEVAYANELGLDVVILDHHTVPDVLPDALAAVNPKRIDSPYPFDELAACGVAYRFLEVLYDHLGVAFNDADFIDLAALGTVVDVAPLIDENRRIVARGLEVMRTGGLRPGLAALARVSGVAPERFTSETLGFALGPRMNAAGRLAHANIALRLLLERDYRRAFDLASELNALNRERQRQTEEATQLAEELLGPADAPLLFVVTDQIAPGIVGLVASRLAERRNRPAVVLSRGPEESRASARSIPGFDIVAAIRKEKELLVRHGGHRSAAGFTVRNEHLDELRERLTATAAAQLGREPARRVIDIDAEAPLAALDGLEVKGLMKFEPTGHGNRKPVLLSRGVRLLDAKPVGQSGDHLRLAVRDGQVTWRGIAFRQAGAELDDEVDIVYSLQHDLSGTGVELEVLDLAPTAAARPLERGR
>NZ_CP042829.1|WP_158067628.1|2051952_2052372_+|hypothetical-protein
MTSEELTLAPDAAQALRESQALCYRLNCAIVAPEHLLAACLLRLRAAGAAGLPSPEAIQQALVATQGIGEDPLDRDVIFGSAARDAISAAAAAARAAGERTITARGLAIALAESGECSPMFFASLGISRRELADLLRAA
>NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD
MDQFLNFLAVEKNASTNTLSAYRNDLLQFTGFMESAFPGTALEAMTKDQLVAFVEHLRGRKYKDTTVARKVATIKSFFSFLAGEGIIEADPTEQVKSPQVGKQLPRALTVEEVDELLEQPARRNTPEARRDKAMLELAYATGLRVTELVSLDVNDVALESDPVTVRCVGKGDKERVLTLPPTAVDELRQYIFHVRPRLVRNRRETALFVNRRGERLTRQGFWLILKNYAKEAGLDTAITPHTLRHTYATHMLAGGMPLRYVQDALGHASISTTQIYTHLTDQQKRKAYDQAHPRASA

Crispr_ID: NZ_CP042829_6

• CRISPR_ID: NZ_CP042829_6
• CRISPR_location: 2063700-2065189
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 19 spacers
• Cas_protein_info: cas6,csm5gr7,csm3gr7,csm2gr11,cas10,cas2

Consensus repeat of NZ_CP042829_6

Consensus_repeat	Method
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	PILER-CR
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CRISPRCasFinder
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CRT

spacers of NZ_CP042829_6

>6.1|2063736|39|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCGAACTTGTCACGGTACTCTTCGGGAACAATCACCTCT
>6.2|2063811|35|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
GTGAGGTATTTTTCGTCGATCCACCGGGTGCCGGA
>6.3|2063882|42|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCAGCTGCACCTGGACGTCGATGGTGTCGAGCCGTCCCCAGA
>6.4|2063960|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGAACGCGGCGGGCCTGGAAGCCATTCACCTCAACGGTGAA
>6.5|2064037|40|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCGTCCAGCGCTGCCAGAAAGCGGGCGGCATCGTTCATGA
>6.6|2064113|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
ACAGTCATCCCGCGAATCTCGACCGTCTCGACGGTCTCGAT
>6.7|2064190|39|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TTCTTAACGTTCTCTTCATAGGGAGACATGCTTCCCGAT
>6.8|2064265|35|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CTGAGGGTCCTCTCTCCGAGAGGGGCTCTCGCATG
>6.9|2064336|43|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TTCTTCATCGATTTCTCGCGTTCCCGAGTAGGAGTAACGCGCC
>6.10|2064415|47|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCCTTCGGAGCGATCGTGACCCACTCCCCGTCCTGGACGCCGGGGCT
>6.11|2064498|43|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TGTACGAGTTCCTCTGGAAGGTGGGCCAGCTGGTCGTCGACCA
>6.12|2064577|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGGGTGACCGAGGGGATGAAGTCGAGAGGGTAGCTGTACCG
>6.13|2064654|44|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCACGAGAGGGAGTGATCCGCCGAATAGTTGCGAACGGCATTGA
>6.14|2064734|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
GGCACGGCGGCCTCCTCCGAAATGGACAGGCCGAAAATCGG
>6.15|2064811|38|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TAACCCGACATGGGCCCGACGAGGTACACAGTGCCGGA
>6.16|2064885|46|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
GCGGTCGACAGGCTCGCCGCCCAGCGCTCCACGGTCTGCAGCCGGG
>6.17|2064967|40|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
AGGAAGCTAACCAGGCTTCTGTTCGAGGCCAGATCCTTAA
>6.18|2065043|37|NZ_CP042829|CRISPRCasFinder,CRT
GTCGACCCCGGCCCGGCGCACGGCATGGCGGGCTGCC
>6.19|2065116|38|NZ_CP042829|CRISPRCasFinder,CRT
AACACCTCGTCAATCCGGGCGTGGCGCTCGTTCGCCCG

CRISPR arrays and Neighbor proteins around NZ_CP042829_6

CRISPR arrays

The CRISPR arrays of NZ_CP042829_6

>merge|NZ_CP042829|6|2063700-2065189|PILER-CR,CRISPRCasFinder,CRT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTCGAACTTGTCACGGTACTCTTCGGGAACAATCACCTCTGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACGTGAGGTATTTTTCGTCGATCCACCGGGTGCCGGAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTCAGCTGCACCTGGACGTCGATGGTGTCGAGCCGTCCCCAGAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACCGAACGCGGCGGGCCTGGAAGCCATTCACCTCAACGGTGAAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTCGTCCAGCGCTGCCAGAAAGCGGGCGGCATCGTTCATGAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACACAGTCATCCCGCGAATCTCGACCGTCTCGACGGTCTCGATGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTTCTTAACGTTCTCTTCATAGGGAGACATGCTTCCCGATGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAGCCTGAGGGTCCTCTCTCCGAGAGGGGCTCTCGCATGGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTTCTTCATCGATTTCTCGCGTTCCCGAGTAGGAGTAACGCGCCGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTCCTTCGGAGCGATCGTGACCCACTCCCCGTCCTGGACGCCGGGGCTGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTGTACGAGTTCCTCTGGAAGGTGGGCCAGCTGGTCGTCGACCAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACCGGGTGACCGAGGGGATGAAGTCGAGAGGGTAGCTGTACCGGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACTCACGAGAGGGAGTGATCCGCCGAATAGTTGCGAACGGCATTGAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACGGCACGGCGGCCTCCTCCGAAATGGACAGGCCGAAAATCGGGTTGCAACCATCGAATCCCCGCGAGGGGGCTGAAACTAACCCGACATGGGCCCGACGAGGTACACAGTGCCGGAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACGCGGTCGACAGGCTCGCCGCCCAGCGCTCCACGGTCTGCAGCCGGGGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACAGGAAGCTAACCAGGCTTCTGTTCGAGGCCAGATCCTTAAGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACGTCGACCCCGGCCCGGCGCACGGCATGGCGGGCTGCCGTTGCAACCATCGAATCCCCGCCAGGGGACAGCAGCAACACCTCGTCAATCCGGGCGTGGCGCTCGTTCGCCCGGTTGTAACGGTCGAATCCTCGCCACTCGACGGCACC

>NZ_CP042829|6|4|2063700-2065042|PILER-CR
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGAACTTGTCACGGTACTCTTCGGGAACAATCACCTCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GTGAGGTATTTTTCGTCGATCCACCGGGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCAGCTGCACCTGGACGTCGATGGTGTCGAGCCGTCCCCAGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGAACGCGGCGGGCCTGGAAGCCATTCACCTCAACGGTGAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGTCCAGCGCTGCCAGAAAGCGGGCGGCATCGTTCATGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	ACAGTCATCCCGCGAATCTCGACCGTCTCGACGGTCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTAACGTTCTCTTCATAGGGAGACATGCTTCCCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAGC	CTGAGGGTCCTCTCTCCGAGAGGGGCTCTCGCATG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTCATCGATTTCTCGCGTTCCCGAGTAGGAGTAACGCGCC
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCCTTCGGAGCGATCGTGACCCACTCCCCGTCCTGGACGCCGGGGCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TGTACGAGTTCCTCTGGAAGGTGGGCCAGCTGGTCGTCGACCA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGGGTGACCGAGGGGATGAAGTCGAGAGGGTAGCTGTACCG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCACGAGAGGGAGTGATCCGCCGAATAGTTGCGAACGGCATTGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GGCACGGCGGCCTCCTCCGAAATGGACAGGCCGAAAATCGG
GTTGCAACCATCGAATCCCCGCGAGGGGGCTGAAAC	TAACCCGACATGGGCCCGACGAGGTACACAGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GCGGTCGACAGGCTCGCCGCCCAGCGCTCCACGGTCTGCAGCCGGG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	AGGAAGCTAACCAGGCTTCTGTTCGAGGCCAGATCCTTAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC

>NZ_CP042829|6|5|2063700-2065189|CRISPRCasFinder
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGAACTTGTCACGGTACTCTTCGGGAACAATCACCTCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GTGAGGTATTTTTCGTCGATCCACCGGGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCAGCTGCACCTGGACGTCGATGGTGTCGAGCCGTCCCCAGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGAACGCGGCGGGCCTGGAAGCCATTCACCTCAACGGTGAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGTCCAGCGCTGCCAGAAAGCGGGCGGCATCGTTCATGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	ACAGTCATCCCGCGAATCTCGACCGTCTCGACGGTCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTAACGTTCTCTTCATAGGGAGACATGCTTCCCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAGC	CTGAGGGTCCTCTCTCCGAGAGGGGCTCTCGCATG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTCATCGATTTCTCGCGTTCCCGAGTAGGAGTAACGCGCC
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCCTTCGGAGCGATCGTGACCCACTCCCCGTCCTGGACGCCGGGGCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TGTACGAGTTCCTCTGGAAGGTGGGCCAGCTGGTCGTCGACCA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGGGTGACCGAGGGGATGAAGTCGAGAGGGTAGCTGTACCG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCACGAGAGGGAGTGATCCGCCGAATAGTTGCGAACGGCATTGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GGCACGGCGGCCTCCTCCGAAATGGACAGGCCGAAAATCGG
GTTGCAACCATCGAATCCCCGCGAGGGGGCTGAAAC	TAACCCGACATGGGCCCGACGAGGTACACAGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GCGGTCGACAGGCTCGCCGCCCAGCGCTCCACGGTCTGCAGCCGGG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	AGGAAGCTAACCAGGCTTCTGTTCGAGGCCAGATCCTTAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GTCGACCCCGGCCCGGCGCACGGCATGGCGGGCTGCC
GTTGCAACCATCGAATCCCCGCCAGGGGACAGCAGC	AACACCTCGTCAATCCGGGCGTGGCGCTCGTTCGCCCG
GTTGTAACGGTCGAATCCTCGCCACTCGACGGCACC

>NZ_CP042829|6|2|2063700-2065189|CRT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGAACTTGTCACGGTACTCTTCGGGAACAATCACCTCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GTGAGGTATTTTTCGTCGATCCACCGGGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCAGCTGCACCTGGACGTCGATGGTGTCGAGCCGTCCCCAGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGAACGCGGCGGGCCTGGAAGCCATTCACCTCAACGGTGAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCGTCCAGCGCTGCCAGAAAGCGGGCGGCATCGTTCATGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	ACAGTCATCCCGCGAATCTCGACCGTCTCGACGGTCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTAACGTTCTCTTCATAGGGAGACATGCTTCCCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAGC	CTGAGGGTCCTCTCTCCGAGAGGGGCTCTCGCATG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TTCTTCATCGATTTCTCGCGTTCCCGAGTAGGAGTAACGCGCC
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCCTTCGGAGCGATCGTGACCCACTCCCCGTCCTGGACGCCGGGGCT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TGTACGAGTTCCTCTGGAAGGTGGGCCAGCTGGTCGTCGACCA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CGGGTGACCGAGGGGATGAAGTCGAGAGGGTAGCTGTACCG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	TCACGAGAGGGAGTGATCCGCCGAATAGTTGCGAACGGCATTGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GGCACGGCGGCCTCCTCCGAAATGGACAGGCCGAAAATCGG
GTTGCAACCATCGAATCCCCGCGAGGGGGCTGAAAC	TAACCCGACATGGGCCCGACGAGGTACACAGTGCCGGA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GCGGTCGACAGGCTCGCCGCCCAGCGCTCCACGGTCTGCAGCCGGG
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	AGGAAGCTAACCAGGCTTCTGTTCGAGGCCAGATCCTTAA
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	GTCGACCCCGGCCCGGCGCACGGCATGGCGGGCTGCC
GTTGCAACCATCGAATCCCCGCCAGGGGACAGCAGC	AACACCTCGTCAATCCGGGCGTGGCGCTCGTTCGCCCG
GTTGTAACGGTCGAATCCTCGCCACTCGACGGCACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158067632.1|2056727_2057228_-|phosphohistidine-phosphatase	unknown	unknown	gnl|CDD|224973
NZ_CP042829.1|WP_158067633.1|2057237_2057600_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl|CDD|274043
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_CP042829.1|WP_158067630.1|2054853_2055123_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067628.1|2051952_2052372_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl|CDD|273193
NZ_CP042829.1|WP_158067634.1|2057596_2057806_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067636.1|2065235_2065796_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|350690
NZ_CP042829.1|WP_158067631.1|2055147_2056731_+|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NZ_CP042829.1|WP_158067642.1|2072543_2073779_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein	unknown	unknown	gnl|CDD|350769
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_CP042829.1|WP_158067635.1|2062341_2062923_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067629.1|2053584_2054769_+|acyl-CoA-dehydrogenase	unknown	unknown	gnl|CDD|173847

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	2.1e-16	55.1	0.4
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	8.1e-21	69.5	0.3
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.2e-21	71.4	0.0
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	1.3e-66	219.2	0.0
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	4.2e-84	277.9	0.0
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	3.4e-25	83.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158067632.1|2056727_2057228_-|phosphohistidine-phosphatase	gnl|CDD|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	6.4463e-30
NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD	gnl|CDD|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	4.93523e-124
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.1267e-14
NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.67431e-72
NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ	gnl|CDD|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	4.49619e-156
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	4.19674e-76
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.08276e-20
NZ_CP042829.1|WP_158067631.1|2055147_2056731_+|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	1.06751e-107
NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase	gnl|CDD|350690	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. UvrD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.44869e-25
NZ_CP042829.1|WP_158067629.1|2053584_2054769_+|acyl-CoA-dehydrogenase	gnl|CDD|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	2.26603e-143
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.3259e-79
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.68493e-12
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.85725e-22

Protein sequences

>NZ_CP042829.1|WP_158067635.1|2062341_2062923_+|hypothetical-protein
MPDRQAMEDLKKSMTPERLAKLIAEAYGTSVNSDNPEEVAMRLIKEFGFETVLDTFFDPDPYIRDEVIGGRMREMSDSSLDVARWLKSNGDDYSAYVEATVYSGRFYNSSWCDATEIGVVLDDGSYMDLEWACDSLDWREAVDDLPVGEYTVVGSAPIVNEVIERLRSRGSKVWDEKSAAEWDDEEESDDSEA
>NZ_CP042829.1|WP_158067634.1|2057596_2057806_-|hypothetical-protein
MGDFTPNAMAKVMALAANPIRATRFEIKDLGNNEVEISYIGDTTRVVWSKWVENGGKWQIDDVKEVTAS
>NZ_CP042829.1|WP_158067633.1|2057237_2057600_-|hypothetical-protein
MSAEPGDVRAAVERTARAVMTGNLAQVMADLAPEAMAQLMQLASGAQGLSPSQLPSIDGFEVEEEAASPEEARYRVRFRSSMGSVTVATTWRPVVGQWKVVEIGLAGFEPAEGGGTPPGR
>NZ_CP042829.1|WP_158067632.1|2056727_2057228_-|phosphohistidine-phosphatase
MDLLLVRHAIAVERGTMASDAERPLTPEGRARMEEAARGLARLIAPQAILSSPWLRAMQTAEILRETYGLGRVRVCEALASADYDAVIEAAAETDASPVALVGHEPWMGELLAYLVTGDPAGMAVTFKKGGAALARSAGEPRPGGCWLEWLIPPGVLRRVAGERKG
>NZ_CP042829.1|WP_158067631.1|2055147_2056731_+|Ppx/GppA-family-phosphatase
MQSTTPVQPPACSRPDPGACWEWIMPVHPRETIAVIDVGSNSVRLLVARALSLTAFEVIDEARYDARLGAGQAGGNLTPEGMERGLRALAIMTQLAESYSPARLLAVGTEALRRAPNADEFLERVRERTGVRIRVLSGFEEAHAGYIGVINSTALTDGYLLDLGGGSLELMAIAGRQLREVQSVPLGAIYSRETYLHSDPPAPREIRALRKAVRRSFIPVAGAPPVLFGTGGAVRNLARIVRIRRRYPLGRLHGLELTRKEVTRLARELSAVPTEARRRIPGVSANRADLLHAAAIVIDEVMDILGAPCLTVSGQGLREGLAWQAIRGESPVLPDVRAASIAGLALANGVDVISAEPTVLAAAALFDATRTLHGLPDADRSLLLDAARLAGIGMHIDYYNRDRHAEYLVHSGDLHGYAHREVVLLAALVRWADSGTPDLSPYRAIIQPDDTRRAAVLASLLGLARAIRRRTPSPIHDVRAVLEGDTLRLQLTASAPIDVELYELENRRRRFEATLRCRLVVEHATGS
>NZ_CP042829.1|WP_158067630.1|2054853_2055123_-|hypothetical-protein
MRRSFAILVALPLTFALLPLAAVLMTRGAPAGDTTLVLEESGSLASDAASAGAAAWDGAEFGGRDGALTFRGADPHGGPAGGCEEIPQG
>NZ_CP042829.1|WP_158067629.1|2053584_2054769_+|acyl-CoA-dehydrogenase
MVSLELNDEEKLVQQVARDFARKEIRPVAAYYDEREEVPYDLIKKAAAIGFGISKQGSLLDGAGSSLIPSIIAEELSWGCAGIALAINSSGLAAAAIAATGTPEQREQWLAAIASDEHEVHLGAMCLTEPDAGSDVANIQTTATRDGDFYVLNGEKQFITNGGIADVHVVFATEDRSKGWGGISAFVVPKGTPGLQQGTVWKKMGIRASHTANVIFNDCRIPAEYKLGAPAKPGGSAGPGAIGALMTLERTRPVVGAYAVGIARAAYEYALDYAKTRVQFGRPIIKNQGISFMLADMAMAVDSARLMVWRAAWMAGANVPYLQAEGSMAKCYASDVAMKVTVDAVQVLGGQGYMRDHPVEKWVRDAKIFQIFEGTNQIQRLVIGRALEALPPRG
>NZ_CP042829.1|WP_158068293.1|2052393_2053287_-|site-specific-tyrosine-recombinase-XerD
MDQFLNFLAVEKNASTNTLSAYRNDLLQFTGFMESAFPGTALEAMTKDQLVAFVEHLRGRKYKDTTVARKVATIKSFFSFLAGEGIIEADPTEQVKSPQVGKQLPRALTVEEVDELLEQPARRNTPEARRDKAMLELAYATGLRVTELVSLDVNDVALESDPVTVRCVGKGDKERVLTLPPTAVDELRQYIFHVRPRLVRNRRETALFVNRRGERLTRQGFWLILKNYAKEAGLDTAITPHTLRHTYATHMLAGGMPLRYVQDALGHASISTTQIYTHLTDQQKRKAYDQAHPRASA
>NZ_CP042829.1|WP_158067628.1|2051952_2052372_+|hypothetical-protein
MTSEELTLAPDAAQALRESQALCYRLNCAIVAPEHLLAACLLRLRAAGAAGLPSPEAIQQALVATQGIGEDPLDRDVIFGSAARDAISAAAAAARAAGERTITARGLAIALAESGECSPMFFASLGISRRELADLLRAA
>NZ_CP042829.1|WP_158067627.1|2050246_2051956_+|single-stranded-DNA-specific-exonuclease-RecJ
MTQLVGAQPPRWRLRDPYAHQNGIPRYPPVLATVLAARGITTRQQAEAFYRPHLLPDHDPLLLPGMADAILRVDRAIREGELIALYGDFDVDGVTSIAILHEGLAPLGARTLPYIPDRFTEGYGLNFGAIRSLAAAGATLLVTADCGISSVAEVAYANELGLDVVILDHHTVPDVLPDALAAVNPKRIDSPYPFDELAACGVAYRFLEVLYDHLGVAFNDADFIDLAALGTVVDVAPLIDENRRIVARGLEVMRTGGLRPGLAALARVSGVAPERFTSETLGFALGPRMNAAGRLAHANIALRLLLERDYRRAFDLASELNALNRERQRQTEEATQLAEELLGPADAPLLFVVTDQIAPGIVGLVASRLAERRNRPAVVLSRGPEESRASARSIPGFDIVAAIRKEKELLVRHGGHRSAAGFTVRNEHLDELRERLTATAAAQLGREPARRVIDIDAEAPLAALDGLEVKGLMKFEPTGHGNRKPVLLSRGVRLLDAKPVGQSGDHLRLAVRDGQVTWRGIAFRQAGAELDDEVDIVYSLQHDLSGTGVELEVLDLAPTAAARPLERGR
>NZ_CP042829.1|WP_158067636.1|2065235_2065796_+|hypothetical-protein
MREFKVGDYTYRAISADDVFQKTRLSRAHPPWYVVPGSSAGEWVLYWHCRARYMVDVTQTRPHSPIDRLRFRLQRAWARVAGRRSQRGRDYTTCKDCWYFSRRELDTFVLLLASWSNEKLADFMFDWMTLVNQRDVLLGDHDFVLPIPDWPFGLAKALGGFRYFGRKDGALYLTETHPELVDPTAD
>NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MGDGLGGRAGPVNELVRIEIPGRWEDQAEETVFIGRALQAWFYRELATRDDGLATALHDMSGEKPFSIALRRQPDVRLVITAYGLLAPFVQELSRAMPDRLLLNARWWRREGEALVERCTWPDLAAGLLAPAPESRATMTFVTPTTFRSRGNYLPLPVPQLVFGGLLERWQTWAPVDLGVEAGTALDGIVVRRHRLASVAVQLKGLVPGFVGAAEFEARQSEGPYAGLVGVLARFARFAGVGAKVSTGFGCVDVATAAGRRRAASERASGTGTE
>NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MERMALPAGGDAGRRFVPRRQRAGWRAGGRDAGSWGRAPGLPVRVRTLSRRGAPVSQPRLVQFRLTFQVLTPLHIGSGIRYHRDYDFRDEGGKAVRLVDVDRALELLPDQLIPRIADGRIAAALDPRTLEQATRAILPVYGTRAVGQDLLAFIRDGMGRAYLPGSTLKGAFRSALLDAFVQRNRDTVRGLVRAGEGSREQAARGVERRAFDVNIEHTVEGRDFPNRDVNRWLRLADAFPVGELKMVASEVQVRSVSSRGRQAIPVWVEAVSPGAQFVTTLAMAPAAWSPWKELDDDRKVLFGSNLLGVLQTWGAALREIELAHWRRLDPGVASNFEGKVPAGQTVFPVGFGTGWVAKTIGRHLRDDRDLMRQLLYRYRLSRSKSPDPANFPVGHRVVDGPGGWLPMGWVMVSGAEPVR
>NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MMTLMRKNSDSGGSSSSSKLLLHIFRKKKRMSENAAVITGILTIRSTLIARTGLRIGAQEASLTIGGVDNPVVRDPLTRQPYIPGSSIKGKMRSLLERVHGLDQNWPIHGDRVRVHACKGEKDYANCTLCQLFGAPAPQERWLCQTRLRFSDTFLTPASVERLMEAATDLPFTELKSEAAIDRVTSAAVPRTMERVPAGSEFGPCEIGLFVYQGDNVATALQWLADGLELLEADALGSSGARGSGRVAFKNISVRRLKVDGQQLIPGEGPAVYESVADLRKGLADLVAWATA
>NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2
MTQYQRPGQGGYQGNRGAQQQGRAAAVDASRFASAAEKIIVRGEVEALISLAEELAKNSGATRTSVRRLYGEARRIDFLLDQDRARALRRARLLEPRLVYQTKRAQREKQNLGEIASALIAMIRQLKHDDPHEEEQRFRRFVEFFEAVVAYLPEEKKDE
>NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MMSWEISEETLRAYCAGLFHDLGKVWAQVPGRGTEPSRFDCETPERHQVRWDDCDSCKRRYRYAHAAMSGTLAKETLPEFRGLADAAALHHAPNAGELGDLVRWVVLGDHLSAGERDDRYDRVGHDGGRSAPALLHPLAKKRDEVFIRPGLLDSRLLFGQLRAGDADSARAAFGEVFDGLRSGLEAAAALSGGDWLALSEHLTGAVYRGAMGVPSAFMTAVADIPLATHLHLAGAFAAALAADGSRAEDSAGARIGLVAGDASGIQEFIHDTGSRRAARALRARSFYIQLLSLVAARWVAIRCGVPPWCAFSVVGGQFVVAVPAGRVGMVRDLQEELDRVLVAAHGPGLSLNLAGLVCSGEELRAFHEVYRQLREALSVRKSRKFEALARSGELFRPQAVASMGRACRTCGREAIGGRVEDDDGVERRVCEFCASLEDLGRALLDSKFVLLEPAGPGERLSGWRKVMAELGHRVELTDRPPERVVRGAVIALDSEGLKKLPCARLVATGRYAPRSRDGLLDFEEIAEQGEGRKLIATMKADVDDLGLFLQQYFTERPPSPSRFLAVSTALSLFFEAYLPELAAERFRNIYLVFSGGDDVALAGPLFDVLDFASELRQEFTRWTAGNDDLHFSAGVVAAHAHRPVQAGIEAAEEALRAAKGQRPNGAEAKNALVALDVWLKWPGFETVRAYEQKLVELVRGQDDKKQLARRALQHLQLLEKAAPGRYEPLIWRSYYQLNRVARDHRDAEEVLMDLRKAAFEPAADGEPGGRRVALAARLAELRTASDGDTEQRRRTGGA
>NZ_CP042829.1|WP_158067642.1|2072543_2073779_+|hypothetical-protein
MSTILLATIGKRDPFHEGEPTGPLRLARETTPDRALLVATEAVRPQAEATAAELQALGIEVAIDILDDLRRGVPDLAVSVSDLLLAGRDLVRRHPELKEAEVIACFTSGTPQMSTAFTLVVRSLLPDARHFQALDPSQTIREPLREFDPDILGHLDARDRTLESLARGDAAAAAASGVPLLHLPSQVPPPWDQKALKAAVTIAEALAAVENYQRQWLAQLAANIPARAGGVDLAGLKAWLQQAANDDLAWGAELGACFLRLDSLNRPTQAVLVAATAAEVLLTAGLRQCGIDPDDIRDPARLPSGFSEVDLMPIDGGRWRIEGAQRRAKLLEALSPDYRRAVETHAGETLRARLAGARNDAVHKGRQVPSESLEAAKAYLEILAAAVGAPAPSSLPTAPSSLGALVQPWRS
>NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase
MLDKLISLWDDFDQKPDYYLRDLIPSIIAYRDLSRFSFIEKKLIQQLKSLMSEEEWNNLANLIEERRTGRLHVLRSDKERHLGAKRELRPRDEEELRLEAIWQLRPRDEEELRRWAAEERRLRGEWERRRREEAEERRRRDEEERRRREEEERRRREKEEERRRREEEERRRRVALVQRIRHALETDYLNADRVFASDPDASLLSAEEYRRLKVDFVREWSRRELGLELDDEQAAAVALAAGNTLVVARAGSGKTTALTARAAFLQKHCRIEPRELLLLAFNRDAANEMKKRLRTFLGENVPHVMTFHALAHAIVKPLSRILSDQKDEDQLDLSKFVQDVIDDLIRSERYADRIKQFMLAYYKEDWDQIIRNKFNLPIAHFLAYRRSLERETLAGEFVKSYGEKLIANILFEHGIEYKYEKPFRWGESVYRPDFTIYFDNRRGGLIIEYFGLKGEPDYDALAEDKIRYWGSRPQWNLIYFSSEDISRHGPDRFASILLGALDRFGIRYRKLSDHEIWAKVKHRAIDRFTEAVVSFVNRARALGVSADDLREKVLHHSSISQFEADFLEVACEIYDSYVDRLASQNLLDFPGLLWSAVERIKNGETSFVRDRGRESGNLKTIKYVLVDEFQDMSTAFIELLLAIKGVSDSSGFFGVGDNWQAINRFAGADIRYFGNFEDIFTSPYKFLLLNNYRSDARIVETGNAIMAPSDERGGVAVSRRDGEVMIFDMAKWRSRDAEKQRHGDDEITPAALRLIWHCLSGGQRVLVLFRARTIPWYIRWLIGPGEKDGVEALQEHFRSAIPERLRGMVTVNTAHSAKGKEEDAVIILDARDGRFPLIHPLWVTGRVFGDSLLSIGSDERRLFYVAATRAKHALYFVTDSRRGSTFLAGVRSHANVASGDWRKLAGPPCVAIEAEAGPGRKLSRYGFRPVRAGRGDGVWRKDVPLVDFSWDRVLSQLRSVDLLGVRAIDDEGNVLHEWSAGVRRSDAGE
>NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2
MDERWYVVAYDIPDTRRREALAAWLEGWGERVQRSVFEFELRPAEFARMLAGIRTRIDPAADQVRVYHLGARGYRSIEVPAGPPARPRPRWFIV
>NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein
MKLEDLTPNAVIRGISPGGLVTVINVQWHGSDALTLVYRTADGKVADRLLYREDEPDLELVEAGRPWSFDGDGATYRLAAEAHRIRLAHLFDPVLAVHTSLVDPLPHQITAVYETMLPRQPLRFVLADDPGAGKTIMAGLLIKELIARGDLQRCLIVCPGSLVEQWQDELSRRFNLPFEILTNDKLEAARTGNWFLENDLAIARLDKLSRNEEVQQKLFAQDNRYDLVVCDEAHKLSATYFGGEVQYTKRYRLGQRLSEITRHFLLMTATPHNGREEDFQLFMALLDGDRFEGRFRQGVHQVDVSDLMRRMVKEDLLTFEGKPLFPERIAYTVPYQLSDDEAFLYQQVTEYVRGEFNRAEALKNNKRAGTVGFALTILQRRLASSPEAIYQSLKRRRERLEKELREQELLGRGRAVALSVADTLLDEDAISDLEDAPDNEVAEVEERVLDQATAAQTVEELRREIETLQRLEDLAARVRRSGRDTKWRQLSELLQEIFTDRALSGTAREETAPYDGRPLPAPVASPNQKLVIFTEHRDTVRYLEERIATLFGRPDAIAVIHGSMGRDERRNAQERFLHDPAVRVLLATDAAGEGINLQRAHLMVNYDLPWNPNRIEQRFGRIHRIGQTEVCHLWNLVASETREGDVYRRLLEKLDEARNALGGKVFDVLGKLQFEGRPLRELLIEAIRYGDRPEVRARLDTVIEHAVDPAHLRELLEERALAHDAMDSSRVARIREEMERAEARRLQPHYVESFFLEAFRRLGGVVREREPRRYEVTYVPAQVRSRDRQIGRGEPVLPRYERITFDKELITDPGKPLAAFICPGHPLLDATIDLVLERHRDLLKRGTVLVDERDHGTSPRVLMVLEHAVQDASLLPSGEHRTISRRLLYVEMDAEGQARHLQYAPYLDYRPLADDEPSPDDLLARPECAWIGAHIEAVARNHAIATVVPEHVREVRDRRIELVEKTRAAVHDRLTKEIAYWDYRAEQLALDEQAGKPAARMNSVEARRRAEDLRLRLRRRIEELDREARVSALPPVVLGGLVVVPIGLLAAMTGRPYPLPAPAVDTGAAAALGRRLVMDVERKLGYDPVDRESDKLRYDIESRVVSGPERGRLRLIEVKARVAGADTVTVTRNEILTSLNKPDDYILALVELHADGGHRVRYLRRPFRREPDFGVTSVNYDFAELLARAEEPR

Crispr_ID: NZ_CP042829_7

• CRISPR_ID: NZ_CP042829_7
• CRISPR_location: 2077381-2079035
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 21 spacers
• Cas_protein_info: cas2,cas10,csm2gr11,csm3gr7,csm5gr7,cas6

Consensus repeat of NZ_CP042829_7

Consensus_repeat	Method
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	PILER-CR
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CRISPRCasFinder
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CRT

spacers of NZ_CP042829_7

>7.1|2077417|36|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TTGGACCTGTGGACCTCCTCCATCAGGGGGCCTGGG
>7.2|2077489|36|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TTGGGCGTAATGGTCAGCCAATTCGGGCCGGCCGGA
>7.3|2077561|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGGCACCATTCCGCCGGCTCCATCCAGTCCGGCAGCACCAC
>7.4|2077638|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGCGATTCTTCCAGCTGGATTTCAGCCAGTTTTTGTTGGTA
>7.5|2077715|43|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGTGGAATGTCGCGTGGCCACGCACGGTCACCAGCGCCGATGT
>7.6|2077794|46|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
>7.7|2077876|38|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
AGCTGCAGGACGTTCAGCCACCGCGGGCCAGCGGCGTC
>7.8|2077950|43|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
ATGCCAGGGGCACCCCTAAGGAGAACATTGAGATCCTCCCTAA
>7.9|2078029|40|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TGTACGAACAGGTCCGCGAGGCTATCGAGGACTATTACTA
>7.10|2078105|39|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TGCGACAAGATCCTTTACTGGCGCAGTCACCCAGCCGAA
>7.11|2078180|44|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
ACGTTTAGATCCTCCTTAAGGGCAATGGTGATGTTGGTCTTAAG
>7.12|2078260|43|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TGGTATTCGCGGGCCAGCCCTGTGCCCAGTTCGTAGTCAAGGG
>7.13|2078339|38|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
ATCGTGACCCACGACGGCTGCTCGCCGGGCGAGATGAG
>7.14|2078413|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CTGTCAACATCGGTGATGGCGTCGACGACAGATGCCCAAGA
>7.15|2078490|46|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
>7.16|2078572|42|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
>7.17|2078650|42|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
>7.18|2078728|44|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
AACTTCAAGGCCGCCCTTCCCGACAAGCTCGGCGATCGAGGGAA
>7.19|2078808|37|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
GCCACGATGACGTCGGCGGTGGAGACCTCCTCCAGCA
>7.20|2078881|41|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
TCCCGCAGGAGCGGGCCGATGGCAGAGGGGCTGCCCTCGAT
>7.21|2078958|42|NZ_CP042829|PILER-CR,CRISPRCasFinder,CRT
CCGTAGATTGGTGACAACTGCCACACTCCCGATGCGGGAGTA

CRISPR arrays and Neighbor proteins around NZ_CP042829_7

CRISPR arrays

The CRISPR arrays of NZ_CP042829_7

>merge|NZ_CP042829|7|2077381-2079035|PILER-CR,CRISPRCasFinder,CRT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTTGGACCTGTGGACCTCCTCCATCAGGGGGCCTGGGGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTTGGGCGTAATGGTCAGCCAATTCGGGCCGGCCGGAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCGGCACCATTCCGCCGGCTCCATCCAGTCCGGCAGCACCACGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCGCGATTCTTCCAGCTGGATTTCAGCCAGTTTTTGTTGGTAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCGTGGAATGTCGCGTGGCCACGCACGGTCACCAGCGCCGATGTGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACAGCTGCAGGACGTTCAGCCACCGCGGGCCAGCGGCGTCGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACATGCCAGGGGCACCCCTAAGGAGAACATTGAGATCCTCCCTAAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTGTACGAACAGGTCCGCGAGGCTATCGAGGACTATTACTAGTTGCAACCCTCGAATCCCTGCTAGGGGACTGAAACTGCGACAAGATCCTTTACTGGCGCAGTCACCCAGCCGAAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACACGTTTAGATCCTCCTTAAGGGCAATGGTGATGTTGGTCTTAAGGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTGGTATTCGCGGGCCAGCCCTGTGCCCAGTTCGTAGTCAAGGGGTTGCAACCCTCGAATCCCCGCTAGGGGACTCAAACATCGTGACCCACGACGGCTGCTCGCCGGGCGAGATGAGGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCTGTCAACATCGGTGATGGCGTCGACGACAGATGCCCAAGAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCTGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACCGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCTGTTGCAACCCTCGAATCCCAACTAGGGGACTGAAACAACTTCAAGGCCGCCCTTCCCGACAAGCTCGGCGATCGAGGGAAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACGCCACGATGACGTCGGCGGTGGAGACCTCCTCCAGCAGTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAACTCCCGCAGGAGCGGGCCGATGGCAGAGGGGCTGCCCTCGATGTTGCAACCATCGAATCCCCGCGAGGGGACTGAAACCCGTAGATTGGTGACAACTGCCACACTCCCGATGCGGGAGTAGTTGCAACCCTCGAATCCCCGCCAGGGGACTGAAAC

>NZ_CP042829|7|5|2077381-2079035|PILER-CR
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGACCTGTGGACCTCCTCCATCAGGGGGCCTGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGGCGTAATGGTCAGCCAATTCGGGCCGGCCGGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGGCACCATTCCGCCGGCTCCATCCAGTCCGGCAGCACCAC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGCGATTCTTCCAGCTGGATTTCAGCCAGTTTTTGTTGGTA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGTGGAATGTCGCGTGGCCACGCACGGTCACCAGCGCCGATGT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	AGCTGCAGGACGTTCAGCCACCGCGGGCCAGCGGCGTC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ATGCCAGGGGCACCCCTAAGGAGAACATTGAGATCCTCCCTAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGTACGAACAGGTCCGCGAGGCTATCGAGGACTATTACTA
GTTGCAACCCTCGAATCCCTGCTAGGGGACTGAAAC	TGCGACAAGATCCTTTACTGGCGCAGTCACCCAGCCGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ACGTTTAGATCCTCCTTAAGGGCAATGGTGATGTTGGTCTTAAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGGTATTCGCGGGCCAGCCCTGTGCCCAGTTCGTAGTCAAGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTCAAAC	ATCGTGACCCACGACGGCTGCTCGCCGGGCGAGATGAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CTGTCAACATCGGTGATGGCGTCGACGACAGATGCCCAAGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCAACTAGGGGACTGAAAC	AACTTCAAGGCCGCCCTTCCCGACAAGCTCGGCGATCGAGGGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	GCCACGATGACGTCGGCGGTGGAGACCTCCTCCAGCA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCCCGCAGGAGCGGGCCGATGGCAGAGGGGCTGCCCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CCGTAGATTGGTGACAACTGCCACACTCCCGATGCGGGAGTA
GTTGCAACCCTCGAATCCCCGCCAGGGGACTGAAAC

>NZ_CP042829|7|6|2077381-2079035|CRISPRCasFinder
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGACCTGTGGACCTCCTCCATCAGGGGGCCTGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGGCGTAATGGTCAGCCAATTCGGGCCGGCCGGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGGCACCATTCCGCCGGCTCCATCCAGTCCGGCAGCACCAC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGCGATTCTTCCAGCTGGATTTCAGCCAGTTTTTGTTGGTA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGTGGAATGTCGCGTGGCCACGCACGGTCACCAGCGCCGATGT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	AGCTGCAGGACGTTCAGCCACCGCGGGCCAGCGGCGTC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ATGCCAGGGGCACCCCTAAGGAGAACATTGAGATCCTCCCTAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGTACGAACAGGTCCGCGAGGCTATCGAGGACTATTACTA
GTTGCAACCCTCGAATCCCTGCTAGGGGACTGAAAC	TGCGACAAGATCCTTTACTGGCGCAGTCACCCAGCCGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ACGTTTAGATCCTCCTTAAGGGCAATGGTGATGTTGGTCTTAAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGGTATTCGCGGGCCAGCCCTGTGCCCAGTTCGTAGTCAAGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTCAAAC	ATCGTGACCCACGACGGCTGCTCGCCGGGCGAGATGAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CTGTCAACATCGGTGATGGCGTCGACGACAGATGCCCAAGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCAACTAGGGGACTGAAAC	AACTTCAAGGCCGCCCTTCCCGACAAGCTCGGCGATCGAGGGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	GCCACGATGACGTCGGCGGTGGAGACCTCCTCCAGCA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCCCGCAGGAGCGGGCCGATGGCAGAGGGGCTGCCCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CCGTAGATTGGTGACAACTGCCACACTCCCGATGCGGGAGTA
GTTGCAACCCTCGAATCCCCGCCAGGGGACTGAAAC

>NZ_CP042829|7|3|2077381-2079035|CRT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGACCTGTGGACCTCCTCCATCAGGGGGCCTGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TTGGGCGTAATGGTCAGCCAATTCGGGCCGGCCGGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGGCACCATTCCGCCGGCTCCATCCAGTCCGGCAGCACCAC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGCGATTCTTCCAGCTGGATTTCAGCCAGTTTTTGTTGGTA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGTGGAATGTCGCGTGGCCACGCACGGTCACCAGCGCCGATGT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	AGCTGCAGGACGTTCAGCCACCGCGGGCCAGCGGCGTC
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ATGCCAGGGGCACCCCTAAGGAGAACATTGAGATCCTCCCTAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGTACGAACAGGTCCGCGAGGCTATCGAGGACTATTACTA
GTTGCAACCCTCGAATCCCTGCTAGGGGACTGAAAC	TGCGACAAGATCCTTTACTGGCGCAGTCACCCAGCCGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	ACGTTTAGATCCTCCTTAAGGGCAATGGTGATGTTGGTCTTAAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TGGTATTCGCGGGCCAGCCCTGTGCCCAGTTCGTAGTCAAGGG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTCAAAC	ATCGTGACCCACGACGGCTGCTCGCCGGGCGAGATGAG
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CTGTCAACATCGGTGATGGCGTCGACGACAGATGCCCAAGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCAACCGCCGTTTTGTTCGCGATCGGGATCCTCTGAACCTTCCTGA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	CGAGGAGCATCTGCCAGCTCGAGGCGTCGAAGTCGACCTTCT
GTTGCAACCCTCGAATCCCAACTAGGGGACTGAAAC	AACTTCAAGGCCGCCCTTCCCGACAAGCTCGGCGATCGAGGGAA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	GCCACGATGACGTCGGCGGTGGAGACCTCCTCCAGCA
GTTGCAACCCTCGAATCCCCGCTAGGGGACTGAAAC	TCCCGCAGGAGCGGGCCGATGGCAGAGGGGCTGCCCTCGAT
GTTGCAACCATCGAATCCCCGCGAGGGGACTGAAAC	CCGTAGATTGGTGACAACTGCCACACTCCCGATGCGGGAGTA
GTTGCAACCCTCGAATCCCCGCCAGGGGACTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_CP042829.1|WP_158067650.1|2092002_2092788_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|224527
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811
NZ_CP042829.1|WP_158067653.1|2094638_2094845_-|CDGSH-iron-sulfur-domain-containing-protein	unknown	unknown	gnl|CDD|378163
NZ_CP042829.1|WP_158067649.1|2091707_2091890_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein	unknown	unknown	gnl|CDD|350769
NZ_CP042829.1|WP_158067648.1|2090191_2091628_-|HD-GYP-domain-containing-protein	unknown	unknown	gnl|CDD|225116
NZ_CP042829.1|WP_158067636.1|2065235_2065796_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	gnl|CDD|227838
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP042829.1|WP_158067654.1|2094927_2095656_+|(Fe-S)-binding-protein	unknown	unknown	gnl|CDD|223325
NZ_CP042829.1|WP_158067652.1|2093829_2094648_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381326
NZ_CP042829.1|WP_158067651.1|2092863_2093721_-|3-alpha,7-alpha,-12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA-hydratase	unknown	unknown	gnl|CDD|178455
NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|350690
NZ_CP042829.1|WP_158067647.1|2086715_2090045_+|ATP-binding-protein	unknown	unknown	gnl|CDD|224400
NZ_CP042829.1|WP_158067642.1|2072543_2073779_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067646.1|2083349_2083601_+|UPF0175-family-protein	unknown	unknown	gnl|CDD|377095
NZ_CP042829.1|WP_158067635.1|2062341_2062923_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.2e-21	71.4	0.0
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	pfam10040_cas6_CAS-III:CAS-IV	8.1e-21	69.5	0.3
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	2.1e-16	55.1	0.4
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	1.3e-66	219.2	0.0
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	cas10	cd09680_cas10_CAS-III	4.2e-84	277.9	0.0
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	3.4e-25	83.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	1.1267e-14
NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	4.19674e-76
NZ_CP042829.1|WP_158067653.1|2094638_2094845_-|CDGSH-iron-sulfur-domain-containing-protein	gnl|CDD|378163	pfam09360, zf-CDGSH, Iron-binding zinc finger CDGSH type. The CDGSH-type zinc finger domain binds iron rather than zinc as a redox-active pH-labile 2Fe-2S cluster. The conserved sequence C-X-C-X2-(S/T)-X3-P-X-C-D-G-(S/A/T)-H is a defining feature of this family. The domain is oriented towards the cytoplasm and is tethered to the mitochondrial membrane by a more N-terminal domain found in higher vertebrates, MitoNEET_N, pfam10660. The domain forms a uniquely folded homo-dimer and spans the outer mitochondrial membrane, orienting the iron-binding residues towards the cytoplasm.	1.02392e-20
NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.3259e-79
NZ_CP042829.1|WP_158067648.1|2090191_2091628_-|HD-GYP-domain-containing-protein	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.7696e-64
NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|227838	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.68493e-12
NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.08276e-20
NZ_CP042829.1|WP_158067654.1|2094927_2095656_+|(Fe-S)-binding-protein	gnl|CDD|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	2.5364e-39
NZ_CP042829.1|WP_158067652.1|2093829_2094648_+|aldo/keto-reductase	gnl|CDD|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	1.15962e-78
NZ_CP042829.1|WP_158067651.1|2092863_2093721_-|3-alpha,7-alpha,-12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA-hydratase	gnl|CDD|178455	PLN02864, PLN02864, enoyl-CoA hydratase.	9.59e-93
NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase	gnl|CDD|350690	cd17932, DEXQc_UvrD, DEXQD-box helicase domain of UvrD. UvrD is a highly conserved helicase involved in mismatch repair, nucleotide excision repair, and recombinational repair. It plays a critical role in maintaining genomic stability and facilitating DNA lesion repair in many prokaryotic species including Helicobacter pylori and Escherichia coli. UvrD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.44869e-25
NZ_CP042829.1|WP_158067647.1|2086715_2090045_+|ATP-binding-protein	gnl|CDD|224400	COG1483, COG1483, Predicted ATPase (AAA+ superfamily) [General function prediction only].	2.503e-65
NZ_CP042829.1|WP_158067650.1|2092002_2092788_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	1.74514e-58
NZ_CP042829.1|WP_158067646.1|2083349_2083601_+|UPF0175-family-protein	gnl|CDD|377095	pfam03683, UPF0175, Uncharacterized protein family (UPF0175). This family contains small proteins of unknown function.	6.08684e-17
NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein	gnl|CDD|350769	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.67431e-72
NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	4.85725e-22

Protein sequences

>NZ_CP042829.1|WP_158067644.1|2076990_2077275_+|CRISPR-associated-endonuclease-Cas2
MDERWYVVAYDIPDTRRREALAAWLEGWGERVQRSVFEFELRPAEFARMLAGIRTRIDPAADQVRVYHLGARGYRSIEVPAGPPARPRPRWFIV
>NZ_CP042829.1|WP_158067643.1|2073966_2076936_+|AAA-family-ATPase
MLDKLISLWDDFDQKPDYYLRDLIPSIIAYRDLSRFSFIEKKLIQQLKSLMSEEEWNNLANLIEERRTGRLHVLRSDKERHLGAKRELRPRDEEELRLEAIWQLRPRDEEELRRWAAEERRLRGEWERRRREEAEERRRRDEEERRRREEEERRRREKEEERRRREEEERRRRVALVQRIRHALETDYLNADRVFASDPDASLLSAEEYRRLKVDFVREWSRRELGLELDDEQAAAVALAAGNTLVVARAGSGKTTALTARAAFLQKHCRIEPRELLLLAFNRDAANEMKKRLRTFLGENVPHVMTFHALAHAIVKPLSRILSDQKDEDQLDLSKFVQDVIDDLIRSERYADRIKQFMLAYYKEDWDQIIRNKFNLPIAHFLAYRRSLERETLAGEFVKSYGEKLIANILFEHGIEYKYEKPFRWGESVYRPDFTIYFDNRRGGLIIEYFGLKGEPDYDALAEDKIRYWGSRPQWNLIYFSSEDISRHGPDRFASILLGALDRFGIRYRKLSDHEIWAKVKHRAIDRFTEAVVSFVNRARALGVSADDLREKVLHHSSISQFEADFLEVACEIYDSYVDRLASQNLLDFPGLLWSAVERIKNGETSFVRDRGRESGNLKTIKYVLVDEFQDMSTAFIELLLAIKGVSDSSGFFGVGDNWQAINRFAGADIRYFGNFEDIFTSPYKFLLLNNYRSDARIVETGNAIMAPSDERGGVAVSRRDGEVMIFDMAKWRSRDAEKQRHGDDEITPAALRLIWHCLSGGQRVLVLFRARTIPWYIRWLIGPGEKDGVEALQEHFRSAIPERLRGMVTVNTAHSAKGKEEDAVIILDARDGRFPLIHPLWVTGRVFGDSLLSIGSDERRLFYVAATRAKHALYFVTDSRRGSTFLAGVRSHANVASGDWRKLAGPPCVAIEAEAGPGRKLSRYGFRPVRAGRGDGVWRKDVPLVDFSWDRVLSQLRSVDLLGVRAIDDEGNVLHEWSAGVRRSDAGE
>NZ_CP042829.1|WP_158067642.1|2072543_2073779_+|hypothetical-protein
MSTILLATIGKRDPFHEGEPTGPLRLARETTPDRALLVATEAVRPQAEATAAELQALGIEVAIDILDDLRRGVPDLAVSVSDLLLAGRDLVRRHPELKEAEVIACFTSGTPQMSTAFTLVVRSLLPDARHFQALDPSQTIREPLREFDPDILGHLDARDRTLESLARGDAAAAAASGVPLLHLPSQVPPPWDQKALKAAVTIAEALAAVENYQRQWLAQLAANIPARAGGVDLAGLKAWLQQAANDDLAWGAELGACFLRLDSLNRPTQAVLVAATAAEVLLTAGLRQCGIDPDDIRDPARLPSGFSEVDLMPIDGGRWRIEGAQRRAKLLEALSPDYRRAVETHAGETLRARLAGARNDAVHKGRQVPSESLEAAKAYLEILAAAVGAPAPSSLPTAPSSLGALVQPWRS
>NZ_CP042829.1|WP_158067641.1|2070024_2072421_-|type-III-A-CRISPR-associated-protein-Cas10/Csm1
MMSWEISEETLRAYCAGLFHDLGKVWAQVPGRGTEPSRFDCETPERHQVRWDDCDSCKRRYRYAHAAMSGTLAKETLPEFRGLADAAALHHAPNAGELGDLVRWVVLGDHLSAGERDDRYDRVGHDGGRSAPALLHPLAKKRDEVFIRPGLLDSRLLFGQLRAGDADSARAAFGEVFDGLRSGLEAAAALSGGDWLALSEHLTGAVYRGAMGVPSAFMTAVADIPLATHLHLAGAFAAALAADGSRAEDSAGARIGLVAGDASGIQEFIHDTGSRRAARALRARSFYIQLLSLVAARWVAIRCGVPPWCAFSVVGGQFVVAVPAGRVGMVRDLQEELDRVLVAAHGPGLSLNLAGLVCSGEELRAFHEVYRQLREALSVRKSRKFEALARSGELFRPQAVASMGRACRTCGREAIGGRVEDDDGVERRVCEFCASLEDLGRALLDSKFVLLEPAGPGERLSGWRKVMAELGHRVELTDRPPERVVRGAVIALDSEGLKKLPCARLVATGRYAPRSRDGLLDFEEIAEQGEGRKLIATMKADVDDLGLFLQQYFTERPPSPSRFLAVSTALSLFFEAYLPELAAERFRNIYLVFSGGDDVALAGPLFDVLDFASELRQEFTRWTAGNDDLHFSAGVVAAHAHRPVQAGIEAAEEALRAAKGQRPNGAEAKNALVALDVWLKWPGFETVRAYEQKLVELVRGQDDKKQLARRALQHLQLLEKAAPGRYEPLIWRSYYQLNRVARDHRDAEEVLMDLRKAAFEPAADGEPGGRRVALAARLAELRTASDGDTEQRRRTGGA
>NZ_CP042829.1|WP_158067640.1|2069542_2070022_-|type-III-A-CRISPR-associated-protein-Csm2
MTQYQRPGQGGYQGNRGAQQQGRAAAVDASRFASAAEKIIVRGEVEALISLAEELAKNSGATRTSVRRLYGEARRIDFLLDQDRARALRRARLLEPRLVYQTKRAQREKQNLGEIASALIAMIRQLKHDDPHEEEQRFRRFVEFFEAVVAYLPEEKKDE
>NZ_CP042829.1|WP_158067639.1|2068761_2069640_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MMTLMRKNSDSGGSSSSSKLLLHIFRKKKRMSENAAVITGILTIRSTLIARTGLRIGAQEASLTIGGVDNPVVRDPLTRQPYIPGSSIKGKMRSLLERVHGLDQNWPIHGDRVRVHACKGEKDYANCTLCQLFGAPAPQERWLCQTRLRFSDTFLTPASVERLMEAATDLPFTELKSEAAIDRVTSAAVPRTMERVPAGSEFGPCEIGLFVYQGDNVATALQWLADGLELLEADALGSSGARGSGRVAFKNISVRRLKVDGQQLIPGEGPAVYESVADLRKGLADLVAWATA
>NZ_CP042829.1|WP_158067638.1|2066642_2067899_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MERMALPAGGDAGRRFVPRRQRAGWRAGGRDAGSWGRAPGLPVRVRTLSRRGAPVSQPRLVQFRLTFQVLTPLHIGSGIRYHRDYDFRDEGGKAVRLVDVDRALELLPDQLIPRIADGRIAAALDPRTLEQATRAILPVYGTRAVGQDLLAFIRDGMGRAYLPGSTLKGAFRSALLDAFVQRNRDTVRGLVRAGEGSREQAARGVERRAFDVNIEHTVEGRDFPNRDVNRWLRLADAFPVGELKMVASEVQVRSVSSRGRQAIPVWVEAVSPGAQFVTTLAMAPAAWSPWKELDDDRKVLFGSNLLGVLQTWGAALREIELAHWRRLDPGVASNFEGKVPAGQTVFPVGFGTGWVAKTIGRHLRDDRDLMRQLLYRYRLSRSKSPDPANFPVGHRVVDGPGGWLPMGWVMVSGAEPVR
>NZ_CP042829.1|WP_158067637.1|2065854_2066679_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MGDGLGGRAGPVNELVRIEIPGRWEDQAEETVFIGRALQAWFYRELATRDDGLATALHDMSGEKPFSIALRRQPDVRLVITAYGLLAPFVQELSRAMPDRLLLNARWWRREGEALVERCTWPDLAAGLLAPAPESRATMTFVTPTTFRSRGNYLPLPVPQLVFGGLLERWQTWAPVDLGVEAGTALDGIVVRRHRLASVAVQLKGLVPGFVGAAEFEARQSEGPYAGLVGVLARFARFAGVGAKVSTGFGCVDVATAAGRRRAASERASGTGTE
>NZ_CP042829.1|WP_158067636.1|2065235_2065796_+|hypothetical-protein
MREFKVGDYTYRAISADDVFQKTRLSRAHPPWYVVPGSSAGEWVLYWHCRARYMVDVTQTRPHSPIDRLRFRLQRAWARVAGRRSQRGRDYTTCKDCWYFSRRELDTFVLLLASWSNEKLADFMFDWMTLVNQRDVLLGDHDFVLPIPDWPFGLAKALGGFRYFGRKDGALYLTETHPELVDPTAD
>NZ_CP042829.1|WP_158067635.1|2062341_2062923_+|hypothetical-protein
MPDRQAMEDLKKSMTPERLAKLIAEAYGTSVNSDNPEEVAMRLIKEFGFETVLDTFFDPDPYIRDEVIGGRMREMSDSSLDVARWLKSNGDDYSAYVEATVYSGRFYNSSWCDATEIGVVLDDGSYMDLEWACDSLDWREAVDDLPVGEYTVVGSAPIVNEVIERLRSRGSKVWDEKSAAEWDDEEESDDSEA
>NZ_CP042829.1|WP_158067645.1|2079750_2083332_+|DUF3883-domain-containing-protein
MKLEDLTPNAVIRGISPGGLVTVINVQWHGSDALTLVYRTADGKVADRLLYREDEPDLELVEAGRPWSFDGDGATYRLAAEAHRIRLAHLFDPVLAVHTSLVDPLPHQITAVYETMLPRQPLRFVLADDPGAGKTIMAGLLIKELIARGDLQRCLIVCPGSLVEQWQDELSRRFNLPFEILTNDKLEAARTGNWFLENDLAIARLDKLSRNEEVQQKLFAQDNRYDLVVCDEAHKLSATYFGGEVQYTKRYRLGQRLSEITRHFLLMTATPHNGREEDFQLFMALLDGDRFEGRFRQGVHQVDVSDLMRRMVKEDLLTFEGKPLFPERIAYTVPYQLSDDEAFLYQQVTEYVRGEFNRAEALKNNKRAGTVGFALTILQRRLASSPEAIYQSLKRRRERLEKELREQELLGRGRAVALSVADTLLDEDAISDLEDAPDNEVAEVEERVLDQATAAQTVEELRREIETLQRLEDLAARVRRSGRDTKWRQLSELLQEIFTDRALSGTAREETAPYDGRPLPAPVASPNQKLVIFTEHRDTVRYLEERIATLFGRPDAIAVIHGSMGRDERRNAQERFLHDPAVRVLLATDAAGEGINLQRAHLMVNYDLPWNPNRIEQRFGRIHRIGQTEVCHLWNLVASETREGDVYRRLLEKLDEARNALGGKVFDVLGKLQFEGRPLRELLIEAIRYGDRPEVRARLDTVIEHAVDPAHLRELLEERALAHDAMDSSRVARIREEMERAEARRLQPHYVESFFLEAFRRLGGVVREREPRRYEVTYVPAQVRSRDRQIGRGEPVLPRYERITFDKELITDPGKPLAAFICPGHPLLDATIDLVLERHRDLLKRGTVLVDERDHGTSPRVLMVLEHAVQDASLLPSGEHRTISRRLLYVEMDAEGQARHLQYAPYLDYRPLADDEPSPDDLLARPECAWIGAHIEAVARNHAIATVVPEHVREVRDRRIELVEKTRAAVHDRLTKEIAYWDYRAEQLALDEQAGKPAARMNSVEARRRAEDLRLRLRRRIEELDREARVSALPPVVLGGLVVVPIGLLAAMTGRPYPLPAPAVDTGAAAALGRRLVMDVERKLGYDPVDRESDKLRYDIESRVVSGPERGRLRLIEVKARVAGADTVTVTRNEILTSLNKPDDYILALVELHADGGHRVRYLRRPFRREPDFGVTSVNYDFAELLARAEEPR
>NZ_CP042829.1|WP_158067646.1|2083349_2083601_+|UPF0175-family-protein
MSQIDITVPDAPFAPLRKAPHELAARMQHAAAIHWYQQGLLSMERAAEAAGRGRAEFLAELARRRVDVFSLDERDLARELQGA
>NZ_CP042829.1|WP_158067647.1|2086715_2090045_+|ATP-binding-protein
MAMTNQERVGKALELLRQGLAPWIERECQRKYGKYWVTKVSETWKNDLVWTDENTPALDAAVLLRVMWEQWNDVFRDTLGHAERSLVSEIRTWRNKWAHQEPISSDDADRALDSIQRLLTAVSAPEADEVERMKLELRRTMFDQQLRAEKRRAGGSLIEPAAASSLRPWREIVVPHPDVASGRYQQAEFAADLWQVHLGEGADEYRDPEEFFRRTYLTESLRRLLVGAVQRLSGTGGDPVVQLQTNFGGGKTHSMLALYHLFSGANPASLSGVDGVMAEAGVTKLPAVRRVVLVGNKISPGNPATKPDGTRVHTLWGELAWQLGGREAYERIRADDERATNPGDVLRELFREYGPCLVLIDEWVAYARQLHDEGDLPAGSFETQFTFAQALTEAAKLAGNCLLVVSLPASDTQGSPHTQADDVEVGGTRGREALERLRNVIGRLESSWRPASAEEGFEIVRRRLFQPIDDPEKFTQRDLTARAFADLYRASTAEFPPECREADYEKRIRAAFPIHPEVFDRLYTDWSTLLKFQRTRGVLRLMAAVIHSLWEKGDRSPLILPSTIPIDDPRVQFELTRYLSDNWVPIIEKDVDGPNSTPARIDAEVTNLGKYAATRRVARTIYLGSAPTAATAHRGIEDRRVKLGCVMPGEPPAVFGDALRRLAAAATHLYQDGARFWYSTQPTVTRLAEDRAEQLTREPDRVAEELERRVRDDLRDRGEFPRVHPFPRSSADVPDEREAGLVVLPADYSHTKDGESQAILAARGILETRGNAPRLFRNTLLFLAADKVRLQDLDEAVRRYLAWKSILDEKETLNLEPLQVRQAEAQLKAADETVRARLPETFCWLLVPEQKRPDAPVEWRAVRLSGSEALAARAGKKARAEELLLGSLGGTMLRTWLDRVPLWRGDHVSLRQLADDFASYLYLPRLKGPAVLANAVAGGIALLTWANDTFAYAESFDEASGRYRGLQFGQAISLPPDAAGLVVRPEAARRQIDAEQGSATTGHTGIDVGGGSSTGGSGGTGSGVYPQPAPETYRRFHGTIELDTEKLPAHAGQVNAEVIAHFLARLGAKVRVTLDIEATLPDGADEHLRRAVEENCRTLKFSSFGFERD
>NZ_CP042829.1|WP_158067648.1|2090191_2091628_-|HD-GYP-domain-containing-protein
MMRPRNWLLLSMGAVLVPLGAFAAMKLVPGWDPMLVYPTEHFWVVSAAALLSALVGAGLAMSVESVRTTRTVYLALGFVAIAMVFATHGLGTPGLLIPETDYPYAVIISAGLSQFLGAIFIALSVVPRRWPGGTFVQRHSTDILAAGLAALAAYLASMVLRPELWDFVPRSRAWDSMLAGTTIVLLGIAGWRYFQAWRLTELPGQLAMVTALGLLGVAQLSMYYSDLWHLSWWLYHGLLLMAFLVVIGGWAIEAARAKSLIVFARALELRDSLDEVRSIADVRVLESLEEAVERKDAYTRHHMGRVAEFAEGLARELGLPERKVLVCAAAGRIHDVGKITVPDAVLLKPGKLTPEEFELMKHHTVRGAHIAKLHPELESLAAVIRAHHERFAGGGYPDGLKGEQIPIEARVVAVGDTFDALTSTRVYRPKRPVSEALEELRRVAGTQLDPDCVEAFIRWLERTGRLDHYTLGASRPAA
>NZ_CP042829.1|WP_158067649.1|2091707_2091890_-|hypothetical-protein
MRSGAGPKELHLVPGPMGWALVREGSEEPLGVFGDLGAALDAATAGPGRVRVVVHGRKEW
>NZ_CP042829.1|WP_158067650.1|2092002_2092788_+|TIGR00730-family-Rossman-fold-protein
MPDDSLPLPAPPARAPEWGKAVNGAEERQFLEGPADRGSELIRTFRIAAEFIRGFRKLHFVGPCVTIFGSARFTEDHPYYDLTRRVGRAIAREGFTVMTGGGPGLMEAANRGAKDVGGHSVGCNIQLPHEQKPNPYLDTFVEFRYFFVRKVMLAKYSYAFIAMPGGFGTLDELFEIATLIQTRKIRDYPCILMGVDYYEPLMDFLLNRLVAMGTIDPEDLDRLVLTDSPEEAAAIVREVGIRKFGLRYRSVAPKRRRILFE
>NZ_CP042829.1|WP_158067651.1|2092863_2093721_-|3-alpha,7-alpha,-12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA-hydratase
MPIDPSKALGAPIQGGSFRWDRDRVILYHLGIGAGDPPTDPNELAYTYERNLKVLPSFGVIPAFGSLGGVGQVPGLQFNPALLLHGEQDLEIRKPIPVEGEVETNGKVAGIYDKGKAALVVLETETKLKGEAEPLFVNRFSLFLRGEGGFGGESGPPAGNEAPNRAPDGTVESKTLPQQALLYRLSGDKNPLHADPDFAKMGGFDRPILHGLCSFGVVCKAVVDHALGGDTGKVARYQARFAGVVFPGETIVTSFWREGNTILVAAQTKERGTPVITNAAITIRD
>NZ_CP042829.1|WP_158067652.1|2093829_2094648_+|aldo/keto-reductase
MPIPLRPFGAAGFELPVLGLGAMDTPHSPEAEATVRAALDAGIRFIDTARDYEGSEYLLGSVLRERPAAEVFLASKTFRRTAASAQYEIDRSRQVLGRETIDLYQLHDVSTPEAWAQVMAPGGALEGLRDAVDRGAIRFIGISTHSLEVARLAIASGAFAAIMLEYSAFYPESLPVLELAADRGVAVIVMRPLGGSGRTSAIRGRMARGEAGPLTPANLLRYVLTCPAVSVVIPGARYPDRIRANVAAVEAFVPMSPAEMRELERAAAALYD
>NZ_CP042829.1|WP_158067653.1|2094638_2094845_-|CDGSH-iron-sulfur-domain-containing-protein
MAETTITVRDNGPYIVRGEFTVVDAEGKAFEKKDVVALCRCGHSATKPFCDGAHQREGFSSAPRAGQS
>NZ_CP042829.1|WP_158067654.1|2094927_2095656_+|(Fe-S)-binding-protein
MPGMAAVALFDPCYLQALRPGDAASARRVLEALGDVVTLIDGRCCGQPAFNSGFRSEARAVGRQLLRAARAHAAIVTASGSCTAMVRHYLPALWEPPRSAAAAAIASRFVDFPTYVARHPGFERLGLRLPGVVALHESCHSRRELGASAAVAAVLARIEGLEVREPAFPEECCGFGGTFAVKEPEVSVEMMRAKLEALAATGARVVVSPDYSCLAHLQAGAAGLGIQLEGWTLPELLARALE

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378499-378520	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378534-378555	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	790546-790567	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	790574-790595	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	825514-825535	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1002111-1002132	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1068592-1068613	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448092-1448113	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448169-1448190	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448218-1448239	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448239-1448260	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448267-1448288	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448288-1448309	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450793-1450814	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456783-1456804	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1614033-1614054	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1614145-1614166	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	378506-378527	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	825521-825542	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	881082-881103	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1002097-1002118	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1448085-1448106	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1448162-1448183	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1448232-1448253	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1448281-1448302	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1456776-1456797	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1500337-1500358	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614026-1614047	0	1.0
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614159-1614180	0	1.0
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378471-378492	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378478-378499	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378562-378583	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378576-378597	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378583-378604	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	881026-881047	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	926400-926421	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	926407-926428	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	926806-926827	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	928736-928757	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1068571-1068592	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1136915-1136936	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1136922-1136943	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1136929-1136950	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1136936-1136957	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204357-1204378	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204364-1204385	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204399-1204420	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204420-1204441	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204441-1204462	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1412844-1412865	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1424676-1424697	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1424697-1424718	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448204-1448225	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450723-1450744	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450744-1450765	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450758-1450779	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450779-1450800	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1451205-1451226	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456720-1456741	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456741-1456762	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456762-1456783	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456804-1456825	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529484-1529505	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529505-1529526	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529526-1529547	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529547-1529568	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529568-1529589	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1614082-1614103	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730099-1730120	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730141-1730162	1	0.955
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730204-1730225	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	790427-790448	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	790434-790455	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	790455-790476	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	790504-790525	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	790532-790553	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	881033-881054	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1068578-1068599	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1118404-1118425	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1204406-1204427	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1204427-1204448	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1303894-1303915	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1450716-1450737	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1456748-1456769	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1456755-1456776	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614236-1614257	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1621327-1621348	1	0.955
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1988049-1988070	1	0.955
NZ_CP042829_1	1.3|1013010|36|NZ_CP042829|CRISPRCasFinder,CRT	1013010-1013045	36	NZ_CP042829.1	424696-424731	2	0.944
NZ_CP042829_1	1.21|1014334|36|NZ_CP042829|CRISPRCasFinder,CRT	1014334-1014369	36	NZ_CP042829.1	428208-428243	2	0.944
NZ_CP042829_1	1.25|1014627|36|NZ_CP042829|CRISPRCasFinder,CRT	1014627-1014662	36	NZ_CP042829.1	428208-428243	2	0.944
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378492-378513	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	378513-378534	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	790567-790588	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	848259-848280	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	848266-848287	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	881089-881110	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	926827-926848	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	928764-928785	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1002104-1002125	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1068585-1068606	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204371-1204392	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1204378-1204399	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448155-1448176	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448190-1448211	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448225-1448246	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448246-1448267	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1448274-1448295	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450162-1450183	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1450800-1450821	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1456790-1456811	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529512-1529533	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1529533-1529554	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1614019-1614040	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1614152-1614173	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1681557-1681578	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730085-1730106	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730120-1730141	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1730183-1730204	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1988042-1988063	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	1988063-1988084	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP042829.1	2412764-2412785	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	881054-881075	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	881061-881082	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1004297-1004318	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1303915-1303936	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1451049-1451070	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1585728-1585749	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614110-1614131	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614180-1614201	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614187-1614208	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614194-1614215	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614201-1614222	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614208-1614229	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614215-1614236	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614222-1614243	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1614257-1614278	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	NZ_CP042829.1	1681564-1681585	2	0.909

1. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378499-378520, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

2. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378534-378555, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

3. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 790546-790567, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

4. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 790574-790595, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

5. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 825514-825535, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

6. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1002111-1002132, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

7. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1068592-1068613, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

8. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448092-1448113, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

9. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448169-1448190, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

10. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448218-1448239, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

11. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448239-1448260, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

12. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448267-1448288, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

13. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448288-1448309, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

14. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450793-1450814, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

15. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456783-1456804, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

16. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614033-1614054, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

17. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614145-1614166, mismatch: 0, identity: 1.0

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggggagcg	Protospacer
**********************

18. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 378506-378527, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

19. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 825521-825542, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

20. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 881082-881103, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

21. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1002097-1002118, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

22. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448085-1448106, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

23. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448162-1448183, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

24. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448232-1448253, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

25. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448281-1448302, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

26. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456776-1456797, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

27. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1500337-1500358, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

28. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614026-1614047, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

29. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614159-1614180, mismatch: 0, identity: 1.0

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcggggagca	Protospacer
**********************

30. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378471-378492, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

31. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378478-378499, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

32. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378562-378583, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggcgcggggagcg	Protospacer
*********** **********

33. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378576-378597, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

34. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378583-378604, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

35. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 881026-881047, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggtgcggggagcg	Protospacer
*********** **********

36. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 926400-926421, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

37. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 926407-926428, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

38. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 926806-926827, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

39. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 928736-928757, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

40. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1068571-1068592, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggaacggggagcg	Protospacer
************.*********

41. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1136915-1136936, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

42. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1136922-1136943, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

43. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1136929-1136950, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

44. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1136936-1136957, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

45. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204357-1204378, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

46. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204364-1204385, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

47. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204399-1204420, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggaacggggagcg	Protospacer
************.*********

48. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204420-1204441, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggaacggggagcg	Protospacer
************.*********

49. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204441-1204462, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggaacggggagcg	Protospacer
************.*********

50. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1412844-1412865, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

51. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1424676-1424697, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

52. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1424697-1424718, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

53. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448204-1448225, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

54. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450723-1450744, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

55. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450744-1450765, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

56. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450758-1450779, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcaggaagcggggagcg	Protospacer
**********.***********

57. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450779-1450800, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

58. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1451205-1451226, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

59. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456720-1456741, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

60. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456741-1456762, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

61. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456762-1456783, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

62. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456804-1456825, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

63. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529484-1529505, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggggcggggagcg	Protospacer
***********.**********

64. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529505-1529526, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

65. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529526-1529547, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

66. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529547-1529568, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

67. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529568-1529589, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagcg	Protospacer
**************.*******

68. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614082-1614103, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggagcg	Protospacer
*******.**************

69. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730099-1730120, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

70. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730141-1730162, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

71. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730204-1730225, mismatch: 1, identity: 0.955

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagcggggagcg	Protospacer
******* **************

72. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 790427-790448, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcggggagca	Protospacer
*******.**************

73. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 790434-790455, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcagggagca	Protospacer
**************.*******

74. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 790455-790476, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcggggagca	Protospacer
*******.**************

75. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 790504-790525, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagccgggagca	Protospacer
************** *******

76. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 790532-790553, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcggggagca	Protospacer
*******.**************

77. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 881033-881054, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggtgcggggagcggggagca	Protospacer
**** *****************

78. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1068578-1068599, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggaacggggagcggggagca	Protospacer
*****.****************

79. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1118404-1118425, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggaacggggagca	Protospacer
************.*********

80. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204406-1204427, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggaacggggagcggggagca	Protospacer
*****.****************

81. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204427-1204448, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggaacggggagcggggagca	Protospacer
*****.****************

82. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1303894-1303915, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggaacggggagca	Protospacer
************.*********

83. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450716-1450737, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcggggagca	Protospacer
*******.**************

84. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456748-1456769, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcagggagca	Protospacer
**************.*******

85. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456755-1456776, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcggggagca	Protospacer
*******.**************

86. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614236-1614257, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcagggagca	Protospacer
**************.*******

87. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1621327-1621348, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcagggagca	Protospacer
**************.*******

88. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1988049-1988070, mismatch: 1, identity: 0.955

agggagcggggagcggggagca	CRISPR spacer
agggagcggggagcagggagca	Protospacer
**************.*******

89. spacer 1.3|1013010|36|NZ_CP042829|CRISPRCasFinder,CRT matches to position: 424696-424731, mismatch: 2, identity: 0.944

ccgcgcgaccgaatcgctcgacgacgtgcaggagca	CRISPR spacer
ccgagcgaccgagtcgctcgacgacgtgcaggagca	Protospacer
*** ********.***********************

90. spacer 1.21|1014334|36|NZ_CP042829|CRISPRCasFinder,CRT matches to position: 428208-428243, mismatch: 2, identity: 0.944

gtcaggcgctggaggtagctgtacgggtcggcgctc	CRISPR spacer
gtcaggcgctgaaggtagctatacgggtcggcgctc	Protospacer
***********.********.***************

91. spacer 1.25|1014627|36|NZ_CP042829|CRISPRCasFinder,CRT matches to position: 428208-428243, mismatch: 2, identity: 0.944

gtcaggcgctggaggtagctgtacgggtcggcgctc	CRISPR spacer
gtcaggcgctgaaggtagctatacgggtcggcgctc	Protospacer
***********.********.***************

92. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378492-378513, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

93. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 378513-378534, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

94. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 790567-790588, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

95. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 848259-848280, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

96. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 848266-848287, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcggttagcg	Protospacer
****************  ****

97. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 881089-881110, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

98. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 926827-926848, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggaactgggagcggggagcg	Protospacer
*****.* **************

99. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 928764-928785, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggaacggggagcggggagcg	Protospacer
*****.*.**************

100. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1002104-1002125, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

101. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1068585-1068606, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

102. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204371-1204392, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcggggaacg	Protospacer
*******.***********.**

103. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1204378-1204399, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggaacggggagcg	Protospacer
*******.****.*********

104. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448155-1448176, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

105. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448190-1448211, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

106. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448225-1448246, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

107. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448246-1448267, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

108. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1448274-1448295, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

109. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450162-1450183, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

110. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1450800-1450821, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

111. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1456790-1456811, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

112. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529512-1529533, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagccgggagcg	Protospacer
*******.****** *******

113. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1529533-1529554, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagccgggagcg	Protospacer
*******.****** *******

114. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614019-1614040, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

115. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614152-1614173, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

116. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1681557-1681578, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggaacagggagcagggagcg	Protospacer
*****.********.*******

117. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730085-1730106, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagccgggagcg	Protospacer
*******.****** *******

118. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730120-1730141, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagccgggagcg	Protospacer
******* ****** *******

119. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1730183-1730204, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccgggagccgggagcg	Protospacer
******* ****** *******

120. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1988042-1988063, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggaacg	Protospacer
**************.****.**

121. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 1988063-1988084, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcggggagcagggagcg	Protospacer
*******.******.*******

122. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to position: 2412764-2412785, mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagccggcagcggggagcg	Protospacer
******* ** ***********

123. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 881054-881075, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

124. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 881061-881082, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

125. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1004297-1004318, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

126. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1303915-1303936, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

127. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1451049-1451070, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

128. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1585728-1585749, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

129. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614110-1614131, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

130. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614180-1614201, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

131. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614187-1614208, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

132. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614194-1614215, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

133. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614201-1614222, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

134. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614208-1614229, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

135. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614215-1614236, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

136. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614222-1614243, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcagggagcagggagca	Protospacer
*******.******.*******

137. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1614257-1614278, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggaggagggagcggggagca	Protospacer
****** .**************

138. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to position: 1681564-1681585, mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
agggagcggggaacagggagca	Protospacer
************.*.*******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	408417-408437	0	1.0
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	214936-214956	1	0.952
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	KY092482	Streptomyces phage Mojorita, complete genome	5658-5678	1	0.952
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	ASHF01000034	Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence	36784-36804	1	0.952
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP023408	Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence	911957-911977	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP013071	Sphingobium indicum B90A plasmid pSRL1, complete sequence	62055-62075	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP013855	Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence	227967-227987	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	387170-387190	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	39034-39054	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP022363	Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence	140177-140197	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	69146-69166	2	0.905
NZ_CP042829_2	2.1|1050897|21|NZ_CP042829|CRISPRCasFinder	1050897-1050917	21	NZ_CP048816	Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed	172622-172642	2	0.905
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP024790	Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence	46827-46848	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	50293-50314	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	133782-133803	2	0.909
NZ_CP042829_2	2.3|1050994|22|NZ_CP042829|CRISPRCasFinder	1050994-1051015	22	CP053333	Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence	20047-20068	2	0.909
NZ_CP042829_2	2.2|1050945|22|NZ_CP042829|CRISPRCasFinder	1050945-1050966	22	AP018319	Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome	434065-434086	3	0.864
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MK494105	Mycobacterium phage Pinnie, complete genome	24830-24867	6	0.842
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	KX641260	Mycobacterium phage Stasia, complete genome	3302-3339	7	0.816
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	NC_031279	Mycobacterium phage Bactobuster, complete genome	5625-5662	7	0.816
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MH697592	Mycobacterium phage Rando14, complete genome	23687-23724	7	0.816
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MK524505	Gordonia phage Dogfish, complete genome	27606-27643	8	0.789
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	NC_016435	Gordonia phage GRU1, complete genome	29185-29222	8	0.789
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	NC_028791	Mycobacterium phage MOOREtheMARYer, complete genome	24451-24488	9	0.763
NZ_CP042829_1	1.3|1013010|36|NZ_CP042829|CRISPRCasFinder,CRT	1013010-1013045	36	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	338410-338445	10	0.722
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MN586045	Mycobacterium phage Brownie5, complete genome	22377-22414	10	0.737
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MN586046	Mycobacterium phage Tinciduntsolum, complete genome	22376-22413	10	0.737
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MT639652	Mycobacterium phage MasterPo, complete genome	22257-22294	10	0.737
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MK061411	Mycobacterium phage Faze9, complete genome	22374-22411	10	0.737
NZ_CP042829_1	1.41|1015814|37|NZ_CP042829|CRISPRCasFinder,CRT	1015814-1015850	37	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4089698-4089734	11	0.703
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	JF937101	Mycobacterium virus LittleE, complete genome	62520-62557	11	0.711
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NZ_KM409652	Escherichia coli strain REL5382 plasmid pB15, complete sequence	9060-9099	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NC_009980	Salmonella enterica subsp. enterica serovar Dublin plasmid pMAK2, complete sequence	12023-12062	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NC_008460	Escherichia coli plasmid pO86A1, complete sequence	118409-118448	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NZ_LT985287	Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence	747-786	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NZ_LT985287	Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence	48466-48505	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NC_019114	Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence	197477-197516	12	0.7
NZ_CP042829_5	5.2|2043290|40|NZ_CP042829|CRISPRCasFinder	2043290-2043329	40	NZ_CP027411	Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence	151227-151266	12	0.7
NZ_CP042829_1	1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR	1018330-1018367	38	MT241607	Achromobacter phage AMA2, complete genome	32256-32293	14	0.632

1. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 0, identity: 1.0

acccgccccggccgcgccgcc	CRISPR spacer
acccgccccggccgcgccgcc	Protospacer
*********************

2. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.952

acccgccccggccgcgccgcc	CRISPR spacer
ccccgccccggccgcgccgcc	Protospacer
 ********************

3. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to KY092482 (Streptomyces phage Mojorita, complete genome) position: , mismatch: 1, identity: 0.952

acccgccccggccgcgccgcc	CRISPR spacer
accggccccggccgcgccgcc	Protospacer
*** *****************

4. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to ASHF01000034 (Streptomyces sp. GBA 94-10 plasmid pGBA1, complete sequence, whole genome shotgun sequence) position: , mismatch: 1, identity: 0.952

acccgccccggccgcgccgcc	CRISPR spacer
acccgccccggcggcgccgcc	Protospacer
************ ********

5. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
ccccgccccggccgcgccgct	Protospacer
 *******************.

6. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP013071 (Sphingobium indicum B90A plasmid pSRL1, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
cgccgccccggccgcgccgcc	Protospacer
  *******************

7. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP013855 (Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
gcccgccccggccgcgccgcg	Protospacer
.******************* 

8. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
cgccgccccggccgcgccgcc	Protospacer
  *******************

9. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
acccgccccggccgcgccggg	Protospacer
*******************  

10. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
acccgccccggccgcgccggt	Protospacer
******************* .

11. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
acccgccccggccgcgccgaa	Protospacer
*******************  

12. spacer 2.1|1050897|21|NZ_CP042829|CRISPRCasFinder matches to NZ_CP048816 (Caulobacter rhizosphaerae strain KCTC 52515 plasmid unnamed) position: , mismatch: 2, identity: 0.905

acccgccccggccgcgccgcc	CRISPR spacer
cgccgccccggccgcgccgcc	Protospacer
  *******************

13. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to NZ_CP024790 (Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence) position: , mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagca	Protospacer
**************.******.

14. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagca	Protospacer
**************.******.

15. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 2, identity: 0.909

ggggagcagggagcggggagcg	CRISPR spacer
ggggagcagggagcagggagca	Protospacer
**************.******.

16. spacer 2.3|1050994|22|NZ_CP042829|CRISPRCasFinder matches to CP053333 (Salmonella enterica subsp. diarizonae serovar 47:k:z35 strain 2009K1094 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

agggagcggggagcggggagca	CRISPR spacer
cggcagcggggagcggggagca	Protospacer
 ** ******************

17. spacer 2.2|1050945|22|NZ_CP042829|CRISPRCasFinder matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 3, identity: 0.864

ggggagcagggagcggggagcg	CRISPR spacer
aaggagcagggagcggggagca	Protospacer
..*******************.

18. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MK494105 (Mycobacterium phage Pinnie, complete genome) position: , mismatch: 6, identity: 0.842

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
cggagccggcgttaccgccgccgccaccgccgccacct	Protospacer
* * **.******************.*********  *

19. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to KX641260 (Mycobacterium phage Stasia, complete genome) position: , mismatch: 7, identity: 0.816

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
cagcgcctgcgttaccgccgccgccaccgccgcctggc	Protospacer
* *.**. *****************.******** **.

20. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to NC_031279 (Mycobacterium phage Bactobuster, complete genome) position: , mismatch: 7, identity: 0.816

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
ccgcgcccgcgttaccgccgccgccaccgccgcctggc	Protospacer
*.*.**. *****************.******** **.

21. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MH697592 (Mycobacterium phage Rando14, complete genome) position: , mismatch: 7, identity: 0.816

ctgtgctgg---cgttaccgccgccgccgccgccgccaggt	CRISPR spacer
---tgccggtaccgttaccgccgcggccgccgccgccgggc	Protospacer
   ***.**   ************ ************.**.

22. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MK524505 (Gordonia phage Dogfish, complete genome) position: , mismatch: 8, identity: 0.789

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
gtccgttggcgagaccgccgccgccgccgccgccacct	Protospacer
 * .*.*****  **********************  *

23. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to NC_016435 (Gordonia phage GRU1, complete genome) position: , mismatch: 8, identity: 0.789

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
atacgccaccgttaccgccggagccgccgccgccaggt	Protospacer
 *..**.. ***********  ****************

24. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to NC_028791 (Mycobacterium phage MOOREtheMARYer, complete genome) position: , mismatch: 9, identity: 0.763

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
cggacccggcgttaccgccaccgccgccgccgccgccc	Protospacer
* *  *.************.**************.  .

25. spacer 1.3|1013010|36|NZ_CP042829|CRISPRCasFinder,CRT matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 10, identity: 0.722

ccgcgcgaccgaatcgctcgacgacgtgcaggagca	CRISPR spacer
ccgcgcggccgaatcgctcgacggcgagtggcgctt	Protospacer
*******.***************.** *..* . . 

26. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MN586045 (Mycobacterium phage Brownie5, complete genome) position: , mismatch: 10, identity: 0.737

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
caccgccagcgcgaccgccgccgccgccgccgccaccg	Protospacer
*  .**..***. **********************   

27. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MN586046 (Mycobacterium phage Tinciduntsolum, complete genome) position: , mismatch: 10, identity: 0.737

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
caccgccagcgcgaccgccgccgccgccgccgccaccg	Protospacer
*  .**..***. **********************   

28. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MT639652 (Mycobacterium phage MasterPo, complete genome) position: , mismatch: 10, identity: 0.737

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
caccgccagcgcgaccgccgccgccgccgccgccaccg	Protospacer
*  .**..***. **********************   

29. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MK061411 (Mycobacterium phage Faze9, complete genome) position: , mismatch: 10, identity: 0.737

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
caccgccagcgcgaccgccgccgccgccgccgccaccg	Protospacer
*  .**..***. **********************   

30. spacer 1.41|1015814|37|NZ_CP042829|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 11, identity: 0.703

ctgtgccgaccgggtcgtccagcgcggtcgccgcgct	CRISPR spacer
gatcgtcgaccgggtcgaccagcgcggtcaccaggac	Protospacer
   .*.*********** ***********.**. * .

31. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to JF937101 (Mycobacterium virus LittleE, complete genome) position: , mismatch: 11, identity: 0.711

ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
cgccgtcggcgtcgccgccgccgccgccgccgcctacg	Protospacer
*  .*..*****..******************** .  

32. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NZ_KM409652 (Escherichia coli strain REL5382 plasmid pB15, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

33. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NC_009980 (Salmonella enterica subsp. enterica serovar Dublin plasmid pMAK2, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

34. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NC_008460 (Escherichia coli plasmid pO86A1, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

35. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NZ_LT985287 (Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

36. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NZ_LT985287 (Escherichia coli strain RPC3 plasmid RCS69_pI, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

37. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

38. spacer 5.2|2043290|40|NZ_CP042829|CRISPRCasFinder matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 12, identity: 0.7

cgaaggagaaggcgacggcgacggagaaggcgagggcgat	CRISPR spacer
ctggttcatcggcgacggcgacggcgagggcgagggcgct	Protospacer
* ..   .  ************** **.********** *

39. spacer 1.75|1018330|38|NZ_CP042829|CRISPRCasFinder,CRT,PILER-CR matches to MT241607 (Achromobacter phage AMA2, complete genome) position: , mismatch: 14, identity: 0.632

---ctgtgctggcgttaccgccgccgccgccgccgccaggt	CRISPR spacer
tctttttgcctttaccgccgccgccgccgccgccgccg---	Protospacer
   .* ***.  .....********************.   

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	424165 : 432555	11	Erysipelothrix_phage(33.33%)	capsid,portal	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP042829|424165:432555|DBSCAN-SWA
GATGACTCACCTCGGGACGATCCTGTCCTCGCTCAGCTCCGGGCAATCGGCGCGCTCGTGGAGTGACCCGGTCGTCTGCCCCGGCTGCGGCTCTGACGACGTCGAGCCTCCGGAGCTGCGGCACCGGTGCTGCGTCTGCCGCGACGCCGGGCGCATCCGCCGGAGCTGGCCAGTCGGGCATGCGCAGTTCGGTCGCTCTGAGCTCTGCCCGGCGTGCAGCGGCGTGAGCGCACGCGGCAGCTCTCCTCCGCCGCCGCCCGAGGCGCGGCTTCGCATCCCGGCGCGCTACGCCCAGGCCCGCATCGCCAACTGGGAGCCGCCGGATGGTGGACCGCGCCGCGCAGCCGAGGCCTACGTCGCATCGTGGCCGCCGCCGAAACCGGTGCTGCTCCTCGCGGGCGACCGCGGCGTCGGCAAGACGCACCTTGCCTGCGGCATCCTCCGCGAGGTGCTGGCCCGCCACGGTGTGCAGGGTCAGTTCTGGCCGGTGGTCGACCTGCTCGACCGCCTGCGCCGCACGGCCGACCCCGACCGAGCGACCGAGTCGCTCGACGACGTGCAGGAGCAGATGCTGCGCGTGCCGCTGCTGGTGCTGGATGACCTCGGCGCCCACCGCGGCACCGAGTGGGCAGAGGAGCGCCTGTTCGGGCTCATCGACGCCCGCTACCGGGACTCGCTGCCCATGGTGGTGACAACGAACCTGACGCTGCAGGAGCTGGCGCCGCGGGTCAGGTCGCGGCTGGTCGACACCGCGTCGTCGGTCGTGGTGCAGGTCTCAGGGCCAGACCGGCGGATGACGCCGCGAGGTGCCGCATGAAAGGCTGTTGCCATGCCTGCCGGCGGGATGAAAGGTTCGGGCCGCAACCTTGCAGCGTGCGGCGCGTCTCGGGAGGTGCCGCATGAGTGCCGCGCCTGTGACGGTGCCGGTCGAGGAGGTGCGGCTCGAGGGAGGCGCCGTCCTCCGCTGCGAGCCGGTCAGGGACGAGGTTGGCCGCCTGCGGCTGGTGCTGCGGCTCTATCCGGCGCCGGCGGCCAAGCGGTTCGGGCCGCTGAGCATCACGGTCGCGTGGCTGACTGCGCGCCAGGCCCGCGCGCTCGTCGATGCGCTCGACAACCTGCTCGTGGAGCACATGGATGGCTGACGTGCTGGAGCTGCAGTTGCCGCTGCCGCCGCGTGAGGCGAGCCCGAACAACCACGCCTCTCGGCTGGCGAGGATGCGCGCCATCGGCGGCTACCGGGCGGCCGTCGGCGTCATCGCACGCCAGGCTGCCGCGCGATGCGGCTGGCGTGGTGACCGCCCGGTGCGGCTGTCGCTGACGTTTGGCCTGCGCGGGGGCGCAGATGGGCACTACCGTCCCGGCGACCCCGACAACGCGCTGGCGTCATGCAAGCCGCTGCTCGACGGGCTCGTCGACGCAGGGGTCATCGTCGACGACTCGTGGCGGTGGCTCGAGATCGGATCCATCCGGTGCGACCGGGATGCTGGCCCGGGCGTGCTGGTGCAGCTGGAGGTGATCGAGTGAGCATCGACTGGGGCTGGCTGGCAGCGACCTACGCCGGCTGGCGCATCGCTGGGCTGCGGGCCAGCGGCACCCGCGACCGGCAGGAGCTGGTGCTGACGCTCGAGCGCGAGGTGCCGGTGGGGCTGCCGGCGCTGCGGCTCGACGCCGACCCGGCAGACTGGGAGGGGCTGGAGGACGAGCTCGCCATCTGGAGGGGGCGAGATGTGGATTGACGTCGGCCGACGGGATGTGCACCTGGTGGACGGCTGGGACACGCTCGGCCCGCGCCGCGTCGAGCCGGCTCACGCTGGTCCGTGCTCGATGCCGGGGTGCCAGCGGCAGGGAGAGCATGAGGGGCTCTGCGGCCGGCATTTCTGGCGGGCCACGTCTCGCGAGCAGGTAACGCCGCTTCAGGCGGTCGGCGAGATCCAGACGCCGTGGATGCGCCACACGGCTGGGCGGCTGGCGGACGCCTACCTCGCCGCCGTCGAGCTCGTGCAGGGTGTGCCGCTCAACCGGTGGGTGCTGCTCAGCCGCGTGTTCGACCAGCCGGAGCCGGTGCGGAGACGTGTGCGGACCATCCTGTCGCTGGCGGCCGGCAGGGACGGTCTGCAGGTCGAGACCGGGCACCAGTACCGGCTGCGCGTCACCGATCGGCAGGCCGCCGTCGACTCGCTCGAGGAGACGGCGCTGGCGACTCACTACTGGCGGCAGGCGGTGGCGGAGCTGGCCGCCCGGCGCGGGGGCCGATGCTGACGCAGATGCTGACGCCGATGCAGGAGTGGGTGCTCGCGATTCTCCGGCAGTCGCCGTGCGTCCCGGTACGTGCGGAGGACATCGCTGCCGAGACCGGGCTGAGCGTGGCCGGGGTCAGGCACTGCGTCCGGGCGCTGCAGACGTGGGGGGAGGACATCAGGTCGACCCCGGGCCCATGGGGGGGGTATGCGTGGTTTCCGGGGGAGGGGGGGGTCGAGGCGACCCCAGGGGGGGAGTATGTCTGCGTCGAGTGCGGGACTGTGTTCTCGGCCGCGGCGGGCGGTAGGGCGCGGGCTGCCCACCGGTTCTGCTCGTTCAGCTGCGCGGCATCGTGGCGCTGGCGTCAGTGTCGGCGCCGGCAGGGGTTGCGGTGATGCCGGCGCGGCTGTGTCTCCGGTGCGGTCAGCGGACGCAGTCGGGATCGCTCTGCGCGAGGTGCGCCGCCCTCGAGGTGACGTCTGGTTCGCCGGCGGCTGTGCCGACCGGATCCGGCTGGCGCTGGCAACGGCTGCGCGAGCAGGTGCTGGCGCGCGACGGCGGGCGATGCCAGCTGTGCGGCCAGCCGGCGCAGCAGGTCGACCACATCGTCCCGCGGGCGGACGGTGGGAGCGACGCGCTCGACAACCTCCGCGCGGTATGCGGCAGGTGCCATCGCATCGTGACGAGAGCTTGGCGAAGACGGAGGGGGAGTTGAGAAGTTTGGAAGCTTTGGCGGAAGCGCGGCCCCCAACCCAAAATCGCGCGCGTCCACCTTCGCCCTTCCCCCGGCCAGCGAGGTGCTTGCGGCCCGGGGAGCCGAGGCGGTAGCGATGCCGGCACGGCGCCAGAAGCCTGTCGAGCTGCTCGCCAACAAGCGGGGCGGTCGTGCGAGGGCCTTGCAGGTCGTCGATGACGGCGACCGGACCGTGCCGTCCCTCCCCCGGCAGCTGCGGCATGTCGGCCCTGCCGGCCGGCAGGCCTGGCGGGAGTTCTGGGGCTCGGCCGTGCGGGCCGCGGTCGAGCTCCCGGCTGATGCTGCCCTTCTGCGGGACTACGTTCTGCTCGTCGATGAGCAGGAACGGCTGCGGGCGCGGATGGCGGCCGGCGAGATGACCCCGCCGGTGGTCTCGCGGATGGCCCAGGTCGAGCGGCACCTGCACCGGATCCGCGAGCACCTCGGGCTGACGCCGCTCGCGCGGTTCCGACTCCAGCTGCAGGTGCTCTCCGGCCGCGAGCGCGAGCAGCGGCTGGCCGCCCAGTCGGAGCAGGCGGAGCCGCCGGCGGTGGTGGTGCTCGATGAGCCGGCGCCGGAGCCGTGGCGGCCGGGTGGGGTGCAGGCCATCGCCGATGATGACGGCGATGGCAACAGCGACACTGCCGACAGCCAGGCCGCGCCCGGCGCTGGTGCAGGAGCGTGACCGCGAGTACTGGTCGCTCGGCTGGCACGTCATCGACTGGATCGAGCGGCACTGTGTGCTGACCAACGGCGAGTGGACCGGCCAGCCATTCCGTCTGCTGCCATGGCAGCGCAGGACCATTCAGCGGCTGTTCGAGGTCGACCCGGCGACCGGGCTGCGGAGATACAGGCGGGCGCTGATTGGCATCCCACGGAAAAACGGCAAAACCCAGCTCGCCGCGGCGCTCGCACTGTACCTGATGCTGGCCGACGGCGAGCCGTCGGCGGAGGTCTACGCGGCCGCGTCGAGCGAGGACCAGGCCGGGCTCGTGTTCGAGGCGGCGCGGCGCATCGTCACGATGGGCCCGCTGGCGGCGGCGTGCCAGGTCGGCGCCTCGCGCATCACGTCGAGCGCCGACCCGTATAGCTACCTTCAGCGCCTGACAAGCCGCGGGTCGAGCTGGCACGGGCTCAACATCCACGGGGTCATCCTCGACGAGCTGCACACGTGGACGACTGACGAGCAATCCGAGCTGTGGGCAGCGCTCACGACCGGCTCGGCTGCCCGGCGCCAACCGCTCCAGATCGCCATCACGACCGCCGGCGTCGACCTGCGGCGGTCGCGCTGCGGGCGCCTCTACCAGCTCGGCCGAGCGATCGAGCGCGGCGAGCAGAAGGACGACTCGTTCTACTTCGAGTGGTGGGAAGCGCCCGGTGAGCTGGACTACCGCGACCCGGCCGCGTGGAGGGCGGCCAACCCGTCGCTGGGCGTGACGGTCACCGAGTCCTACCTCCGCAGCGAGCTGGGAGTGGTGCCCGAGGCGGATTTCCGTCGCCTGTACCTCGACCAGTGGGTGTTGGCCGCGCAGCGGTGGCTGCCTCCGGGGGCGTGGGACGCCTGCACCGGTGATGCGTCGCTCGTCGACGGTGCCCCGACGTGGGTGGGCTGGGACGCGTCGACGCGCTACGACTCGTCGGCCATCGTCGCGGCGCAGGTGCGCGAGGACGGGACGGTGGCGGTGCAGGCGCGGGTGTGGTCGCGGCCGCTGGACATGGCCGGCGCCCCGGCTGCCGACTGGCGGATGCCGCTGGACGAGATGGCCGAGCACCTCCGCGCGCTGGCCGCACGCTACCGGGTCGTCGGGATCGCCTACGACCCGGCGTTTGTGACCTGGGCCGCGAGCGACCTGGAGGCGCAGGGCCTGCCGATGGTCGAGTGGCCACAGACGGACGCCCGGATGGTCCCGGCCACCCGCGCGGTCTACGAGCTGGTGGTGCAGCGCAGGCTCGTGCACTCGGGCGACCAGGTCCTCGCCGCCCACGTCGCCGACGCCGCCCCCTACTACACGCGCTCCGGCGGCACGCGGCTCCGGAAAGCCGGCGGGACGGCGCAGATCGACGCGGCCATCGCGATGCTGATGGCCGTCAGCATGGCACTCATCGAGGGCGGACAGCACGGGGCGCCGGAGGCTCCGCAGCTGTTCGTGTTCGAGGTCTAGGGGGAGCCCATGGCCTGGTGGGGACGCATGTTCCGGTGGGTCGGCGGGAGCCCGGACCGTACGGAGGAGACGCCGGCGTCAGCGGTCGTCGGCCTGCACTCGCAGGCAGGCGTCTGGATGGACGAGCAGGCGGCGCTCGCGATGGCGCCCGTCTACCGTGCGGTCACGCTCATCAGCCAGTCGATCGCCGCCATGCCGCTGCGCATCATGGAGCCGATGCCGGACGGCAGCCGCCGTGTGGCCAACCCGGAGGAGATGGCCGTCCTGTGGAGCCGCCCCAACCCGGAGGAGACCCGGGTGGAGTTCATCGGCCGCCTGCTCGCGCACCTGCTCATCTGGGGCGATGCGTTCGTGTTCGTCGCCGAGCCGGGCCCGCTCGGCGAGGCGCGCAGGCTCGCGCTCATCGAGCCTCCGCGGGTCGACGTCGGCCGCGACGCGCGGGGCGAACGGCTGTACGTGGTCGACGGCCGGTCGTGGCTCGAGTGGCGCGACTGGGTGCGGGGCAGCCCGCGCCCCGGGTTTGTGCACCTGCGCATCGGCTCACTCGACGGGCTGCGCGGCCGCGGCCCGGTCATGGCCGTGCTGGAGTCCCTCGGCGTCGGCCGCGCCGCCGAGCTCTACGCGGCGCGGTATTTTGCGTCGGCCGGCGTGCCGGGCGGCATCATCTACGTCTCCGGGCGGCTGTCGCCGGAGGATGCGCGGCGTCTGGCCGAGCAGTTTGCGGCCGCCCACAGCGGACCCAACGTCCACCGGGTGGCGGTGCTCGACCAGGGGGCGAAATTCGAGTCGCCGGGGGCGGACCCGGCCTCGTTGCAGCTGCTCGACGTGCGCCGGTTCACCGTCACCGAGGTCGCGCGCGTGTTTGGCATCCCGCCCCACCTGCTCGGCGACGCGTCCCAGTCGACCAGCTGGGGCAGCGGGCTGGAGGAGCAGAACCGGGCGTTCATCACGCTCACGCTCCGGCCCTACATCGCATTGCTGGAGTCGGCTCTGACCGACGCGTTCTGCGCCGGCACCGACTACCTCATCCGCATCGACCCGTCGGCGCTGCTGCAGGGCAACCTCCAGAGCCGATTCGCCGCCTACAACGCCGCGCGGCAGGCCGGCCTGATGACGATCAACGAGATCCGAGACCTCGAGGATTTGCCCGGCATCGGCGAGGCCGGGGACAACGTCCTCACGCCGCTGAACATGCAGGTCACGCAGGTGCCGCCGCGCGCCGGCGCCGAGTACATCCCGGAGCAGTGAGATGGGTGACATGCCAGGTCGGACAATCCCAGCGATGGAGATGGAGCAGAAGCTGTTCTCGGCGGCGGCGCCGCCGGCCGAGGCGACCGGCGAGATCGAGGTCACATGGGCCACGCTGGGCGTGGTCGACCGTGACGGCGACATCATCCTGCCCGAGGCCGTCCCGGCGGGCAAAACCGTGCCGATCATGCAGTGGGGGCATCGCCTCAGCGACCTGCCGATCGGCGAGGCGACGCTCTCGGTCGAGGGCGAACGGGCGGTTGCACGCGGGCGCCTGTATCTCGGGACGACGGCTGGCCGCGACCACTACGAGGTGCTCAGGGAGAGGGGCGCCTCCCAGGAGTGGTCGTTCTCCTACTACGTGACGCGCTCATCGGATGACATCGTCGACGGCAGGGCCGTCAGGGTCATCCAGGCGATGGATGTGCTCGAGGTGTCCCCGGTGCTGGTTGGCGCCGGTATCGCGACGCGGACCGACTCGCTCAAATCCGCTGGTCGGCCGCTCCGCGATCATGCCGCCGGGTTGCGGGCCGACCTGGCGGACATGGTCGAGCGCGCAGAGGCGCTGGCTGCCCTGCGCGCCAAGGAGGGGCGCATGCTCTCCGCCGCCAACCGTGCCCTGCTGTCCGACCTGCTCGGCGCACTCCGCGAGGCTGCTGGCCGGCTCGAGGAGCTGCTGCAGGCGGCGGACCCGCAGGCACCGGGGGACGCCGGCAAGGCCGCAGATGCGCGCGGCATCGTGGTTCCCGCTGCGATGCTGGACCGCTACGCGGCGCTCAAATCACTCGCAGAGGAGGTGCTCAGGTGAGCATCGAAACCATCAACCGGGAGCTGCTCACGCTGCAGGAGCGGCTCGACCATGTGGCCGCCAAGGCGGTCAAGACCGACGCCGGCGACATCGACTTCTCCGGCGTCACCGTCTACGGCGACATCTCGAACTCGGCCAAGGCGGAACGGTTCATCGCCGACCAGAAGCAGTTCGCCGAGCTCCTCAACCGGCGCGCCGTGCTCGGCGCGATGGCCGAGGTGGAGAGCTGGCGCGAGCTCGCCGAGGAGAGCAAGGCGCTCATCTCCGGCTCTGGTTCGCCCCGCGGCGACCTGGCCACGCGGCTGGCAGTCGCCCTCAAGGGCGCGCCGGCCGGCTCGGTCCAGGGCGTGTCGTTCGCCCCGCTCGAGCTCAAGGCGCTCATGACCACGAGCGCTGGTTACCCGCCCGAGACGCTCCGGTCCGGCAGAGTCGAGGTCACCCCGACCCGGCCGACGCTCGTCATGGACCTGCCGCCGATGATCCGCACGGTCCAGAACGCCTTCAAGTACGTCCGCGAATCGACGTTCACCAACGCGGCGGCTGAGGTGGCTGAGGGCGGCGCCTACCCGGAGGCCAGCCTCGCCTACACAGAGGTCAGCGAGCCGGTCCAGAAGGTCGCTGTCAACATCCCCGTCACCGAGGAGCAGCTCGAGGATGACCCGGCCGTCGAGGACCTCATCCGGGCCCGCCTGTCGGAGATGATCCGGCAGCGGCTGGACAGCCAGCTGCTCAACGGCAACGGGACGGCGCCCAATCTCCGCGGCGTCCGCAACGTGAGCGGCATCAACGCCGTGTCGCAGGGCACGGACACGGTCCTCGATGCGATCTACAAGGGCATCGTGGCCTGCCGCACGACCGGCTATGCGCAGCCCGACGCCATCGTCATCCACCCGACCAACCTCCAGGCGGTGCGGCTGGCGAAGAGCACGGACGGCCAGTACCTCTTCGGGCCGCCGTCCAGCTCCCTCACCATGCCGATCTGGGGCCTGCGGGTCGTCGAGACGTCGGCCATCCCGGCCGGCAAGGTCGTGGTTGGCGACTGGGCCAACTACTCGGCCCTCGCCATGCGCTCCAACATCGACATCCAGGTGGGCTACTCGGGCACGGGGTTCACGGCCGGCATCAAGACCATCCGGATGGACCTGCGGGCCGCGTTCGCCGTGTTCCGGCCGAGCGCGTTCGCTGAGGTGACCCTCGCCTAG

Protein sequences of DBSCAN-SWA_1

>NZ_CP042829|424165:432555|425889_426423_+|WP_158066088.1|DBSCAN-SWA
MWIDVGRRDVHLVDGWDTLGPRRVEPAHAGPCSMPGCQRQGEHEGLCGRHFWRATSREQVTPLQAVGEIQTPWMRHTAGRLADAYLAAVELVQGVPLNRWVLLSRVFDQPEPVRRRVRTILSLAAGRDGLQVETGHQYRLRVTDRQAAVDSLEETALATHYWRQAVAELAARRGGRC
>NZ_CP042829|424165:432555|426416_426797_+|WP_158066089.1|DBSCAN-SWA
MLTQMLTPMQEWVLAILRQSPCVPVRAEDIAAETGLSVAGVRHCVRALQTWGEDIRSTPGPWGGYAWFPGEGGVEATPGGEYVCVECGTVFSAAAGGRARAAHRFCSFSCAASWRWRQCRRRQGLR
>NZ_CP042829|424165:432555|424165_424981_+|WP_158066084.1|DBSCAN-SWA
MTHLGTILSSLSSGQSARSWSDPVVCPGCGSDDVEPPELRHRCCVCRDAGRIRRSWPVGHAQFGRSELCPACSGVSARGSSPPPPPEARLRIPARYAQARIANWEPPDGGPRRAAEAYVASWPPPKPVLLLAGDRGVGKTHLACGILREVLARHGVQGQFWPVVDLLDRLRRTADPDRATESLDDVQEQMLRVPLLVLDDLGAHRGTEWAEERLFGLIDARYRDSLPMVVTTNLTLQELAPRVRSRLVDTASSVVVQVSGPDRRMTPRGAA
>NZ_CP042829|424165:432555|427698_429297_+|WP_158066091.1|DBSCAN-SWA
MSRRRSRGGRVGCRPSPMMTAMATATLPTARPRPALVQERDREYWSLGWHVIDWIERHCVLTNGEWTGQPFRLLPWQRRTIQRLFEVDPATGLRRYRRALIGIPRKNGKTQLAAALALYLMLADGEPSAEVYAAASSEDQAGLVFEAARRIVTMGPLAAACQVGASRITSSADPYSYLQRLTSRGSSWHGLNIHGVILDELHTWTTDEQSELWAALTTGSAARRQPLQIAITTAGVDLRRSRCGRLYQLGRAIERGEQKDDSFYFEWWEAPGELDYRDPAAWRAANPSLGVTVTESYLRSELGVVPEADFRRLYLDQWVLAAQRWLPPGAWDACTGDASLVDGAPTWVGWDASTRYDSSAIVAAQVREDGTVAVQARVWSRPLDMAGAPAADWRMPLDEMAEHLRALAARYRVVGIAYDPAFVTWAASDLEAQGLPMVEWPQTDARMVPATRAVYELVVQRRLVHSGDQVLAAHVADAAPYYTRSGGTRLRKAGGTAQIDAAIAMLMAVSMALIEGGQHGAPEAPQLFVFEV
>NZ_CP042829|424165:432555|431349_432555_+|WP_158066094.1|capsid|DBSCAN-SWA
MSIETINRELLTLQERLDHVAAKAVKTDAGDIDFSGVTVYGDISNSAKAERFIADQKQFAELLNRRAVLGAMAEVESWRELAEESKALISGSGSPRGDLATRLAVALKGAPAGSVQGVSFAPLELKALMTTSAGYPPETLRSGRVEVTPTRPTLVMDLPPMIRTVQNAFKYVRESTFTNAAAEVAEGGAYPEASLAYTEVSEPVQKVAVNIPVTEEQLEDDPAVEDLIRARLSEMIRQRLDSQLLNGNGTAPNLRGVRNVSGINAVSQGTDTVLDAIYKGIVACRTTGYAQPDAIVIHPTNLQAVRLAKSTDGQYLFGPPSSSLTMPIWGLRVVETSAIPAGKVVVGDWANYSALAMRSNIDIQVGYSGTGFTAGIKTIRMDLRAAFAVFRPSAFAEVTLA
>NZ_CP042829|424165:432555|425063_425306_+|WP_158066085.1|DBSCAN-SWA
MSAAPVTVPVEEVRLEGGAVLRCEPVRDEVGRLRLVLRLYPAPAAKRFGPLSITVAWLTARQARALVDALDNLLVEHMDG
>NZ_CP042829|424165:432555|429306_430545_+|WP_158066092.1|portal|DBSCAN-SWA
MAWWGRMFRWVGGSPDRTEETPASAVVGLHSQAGVWMDEQAALAMAPVYRAVTLISQSIAAMPLRIMEPMPDGSRRVANPEEMAVLWSRPNPEETRVEFIGRLLAHLLIWGDAFVFVAEPGPLGEARRLALIEPPRVDVGRDARGERLYVVDGRSWLEWRDWVRGSPRPGFVHLRIGSLDGLRGRGPVMAVLESLGVGRAAELYAARYFASAGVPGGIIYVSGRLSPEDARRLAEQFAAAHSGPNVHRVAVLDQGAKFESPGADPASLQLLDVRRFTVTEVARVFGIPPHLLGDASQSTSWGSGLEEQNRAFITLTLRPYIALLESALTDAFCAGTDYLIRIDPSALLQGNLQSRFAAYNAARQAGLMTINEIRDLEDLPGIGEAGDNVLTPLNMQVTQVPPRAGAEYIPEQ
>NZ_CP042829|424165:432555|425298_425688_+|WP_158066086.1|DBSCAN-SWA
MADVLELQLPLPPREASPNNHASRLARMRAIGGYRAAVGVIARQAAARCGWRGDRPVRLSLTFGLRGGADGHYRPGDPDNALASCKPLLDGLVDAGVIVDDSWRWLEIGSIRCDRDAGPGVLVQLEVIE
>NZ_CP042829|424165:432555|426796_427117_+|WP_158066090.1|DBSCAN-SWA
MPARLCLRCGQRTQSGSLCARCAALEVTSGSPAAVPTGSGWRWQRLREQVLARDGGRCQLCGQPAQQVDHIVPRADGGSDALDNLRAVCGRCHRIVTRAWRRRRGS
>NZ_CP042829|424165:432555|430546_431353_+|WP_158066093.1|DBSCAN-SWA
MGDMPGRTIPAMEMEQKLFSAAAPPAEATGEIEVTWATLGVVDRDGDIILPEAVPAGKTVPIMQWGHRLSDLPIGEATLSVEGERAVARGRLYLGTTAGRDHYEVLRERGASQEWSFSYYVTRSSDDIVDGRAVRVIQAMDVLEVSPVLVGAGIATRTDSLKSAGRPLRDHAAGLRADLADMVERAEALAALRAKEGRMLSAANRALLSDLLGALREAAGRLEELLQAADPQAPGDAGKAADARGIVVPAAMLDRYAALKSLAEEVLR
>NZ_CP042829|424165:432555|425684_425900_+|WP_158066087.1|DBSCAN-SWA
MSIDWGWLAATYAGWRIAGLRASGTRDRQELVLTLEREVPVGLPALRLDADPADWEGLEDELAIWRGRDVD

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158066084.1|424165_424981_+	hypothetical protein	A0A1B1P8D0	Bacillus_phage	2.0e-17	43.0
WP_158066085.1|425063_425306_+	hypothetical protein	NA	NA	NA	NA
WP_158066086.1|425298_425688_+	hypothetical protein	NA	NA	NA	NA
WP_158066087.1|425684_425900_+	hypothetical protein	NA	NA	NA	NA
WP_158066088.1|425889_426423_+	hypothetical protein	NA	NA	NA	NA
WP_158066089.1|426416_426797_+	HTH domain-containing protein	NA	NA	NA	NA
WP_158066090.1|426796_427117_+	HNH endonuclease	A0A0U2C119	Paracoccus_phage	4.7e-10	47.2
WP_158066091.1|427698_429297_+	hypothetical protein	A0A2K5B285	Erysipelothrix_phage	6.5e-52	32.5
WP_158066092.1|429306_430545_+|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	7.5e-48	32.2
WP_158066093.1|430546_431353_+	hypothetical protein	A0A1B1ING6	uncultured_Mediterranean_phage	1.0e-05	32.2
WP_158066094.1|431349_432555_+|capsid	phage major capsid protein	A0A2R4A188	Microbacterium_phage	2.7e-26	32.5