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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP032801 Escherichia coli strain ERL06-2442 chromosome, complete genome 7 crisprs csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol 0 8 16 0
NZ_CP032802 Escherichia coli strain ERL06-2442 plasmid pERL06-2442, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP032801
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_1 1111083-1111171 Unclear I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_2 1136863-1137075 TypeI-E I-E
3 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_3 1728509-1728614 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_4 2264953-2265102 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_5 2520458-2520581 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_6 4695440-4695574 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP032801_7 4926662-4926811 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP032801_2 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT 1136893-1136923 31 MK047640 Phage NV18, complete genome 15646-15676 1 0.968
NZ_CP032801_2 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder 1136893-1136924 32 MK047640 Phage NV18, complete genome 15645-15676 1 0.969
NZ_CP032801_2 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT 1136893-1136923 31 MF417881 Uncultured Caudovirales phage clone 7AX_3, partial genome 2718-2748 2 0.935
NZ_CP032801_2 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder 1136893-1136924 32 MF417881 Uncultured Caudovirales phage clone 7AX_3, partial genome 2718-2749 2 0.938
NZ_CP032801_5 5.1|2520501|38|NZ_CP032801|CRISPRCasFinder 2520501-2520538 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 101196-101230 2 0.943
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 165464-165498 3 0.914
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14239-14273 5 0.857
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56080-56114 5 0.857
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 6804-6838 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208981-209015 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219475-219509 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210309-210343 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191264-191298 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30177-30211 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 170-204 6 0.829
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 88-122 6 0.829
NZ_CP032801_2 2.3|1137015|31|NZ_CP032801|CRT 1137015-1137045 31 NC_015512 Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence 90200-90230 7 0.774
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87137-87171 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 138033-138067 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-77 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3372-3406 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208887-208921 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-76 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3371-3405 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219381-219415 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-76 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3371-3405 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210215-210249 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-76 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3371-3405 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191170-191204 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27246-27280 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18350-18384 7 0.8
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15018-15052 7 0.8
NZ_CP032801_2 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT 1136893-1136923 31 NC_011370 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence 102901-102931 8 0.742
NZ_CP032801_2 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT 1136893-1136923 31 NZ_CP032697 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence 313484-313514 8 0.742
NZ_CP032801_2 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT 1136893-1136923 31 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 984473-984503 8 0.742
NZ_CP032801_2 2.6|1137015|32|NZ_CP032801|CRISPRCasFinder 1137015-1137046 32 NC_015512 Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence 90200-90231 8 0.75
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 262-315 8 0.852
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12103-12156 8 0.852
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 41406-41459 8 0.852
NZ_CP032801_4 4.1|2265006|44|NZ_CP032801|CRISPRCasFinder 2265006-2265049 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 210148-210191 8 0.818
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 61916-61950 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4148 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229148-229182 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229249-229283 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229350-229384 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229451-229485 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 203852-203886 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 204038-204072 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 204131-204165 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4147 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239642-239676 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239743-239777 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239844-239878 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239945-239979 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214346-214380 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214532-214566 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214625-214659 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4147 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230554-230588 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230655-230689 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230756-230790 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230857-230891 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205180-205214 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205366-205400 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205459-205493 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4147 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211524-211558 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211625-211659 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211726-211760 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211827-211861 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186135-186169 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186321-186355 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186414-186448 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 14272-14306 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 6744-6778 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7426 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 83590-83624 8 0.771
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84250 8 0.771
NZ_CP032801_2 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder 1136893-1136924 32 NC_011370 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence 102900-102931 9 0.719
NZ_CP032801_2 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder 1136893-1136924 32 NZ_CP032697 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence 313483-313514 9 0.719
NZ_CP032801_2 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder 1136893-1136924 32 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 984472-984503 9 0.719
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386558-386592 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4013-4047 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4012-4046 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4012-4046 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4012-4046 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14022 9 0.743
NZ_CP032801_6 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder 4695490-4695524 35 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 41415-41449 9 0.743
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229441-229494 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239935-239988 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7383-7436 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84207-84260 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87127-87180 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230847-230900 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211817-211870 10 0.815
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4105-4158 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3363-3416 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4104-4157 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3362-3415 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4104-4157 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3362-3415 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4104-4157 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3362-3415 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31242-31295 11 0.796
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 34-87 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4004-4057 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229239-229292 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229340-229393 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 33-86 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4003-4056 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239733-239786 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239834-239887 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 33-86 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4003-4056 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230645-230698 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230746-230799 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 33-86 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4003-4056 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211615-211668 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211716-211769 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15008-15061 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18340-18393 12 0.778
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30167-30220 13 0.759
NZ_CP032801_3 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder 1728535-1728588 54 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 160-213 14 0.741

1. spacer 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.968

tcaccaaaacagtgacaaaaactgtcaccaa	CRISPR spacer
tcaccaaaacagtgacaaaaagtgtcaccaa	Protospacer
********************* *********

2. spacer 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tcaccaaaacagtgacaaaaactgtcaccaaa	CRISPR spacer
tcaccaaaacagtgacaaaaagtgtcaccaaa	Protospacer
********************* **********

3. spacer 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.935

tcaccaaaacagtgacaaaaactgtcaccaa	CRISPR spacer
tcaccaaatcagtgacaaaaagtgtcaccaa	Protospacer
******** ************ *********

4. spacer 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.938

tcaccaaaacagtgacaaaaactgtcaccaaa	CRISPR spacer
tcaccaaatcagtgacaaaaagtgtcaccaaa	Protospacer
******** ************ **********

5. spacer 5.1|2520501|38|NZ_CP032801|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

6. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.943

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
ttcagcgcctgatgcgacgctggcgcgtcttatca	Protospacer
**********************.*********** 

7. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.914

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tgtaacgcctgatgcgacgctgacgcgtcttatct	Protospacer
* .*.******************************

8. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accagcgcctgatgcgccgctgtcgcgtcttatca	Protospacer
 .************** ***** *********** 

9. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 5, identity: 0.857

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
ctcaacgcctgatgcgacgctggcgcgtcttagcg	Protospacer
.***.*****************.********* * 

10. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gtttatgccagatgcgacgctgacgcgtcttatct	Protospacer
 *. ..*** *************************

11. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. ...**************************** 

12. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. ...**************************** 

13. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. ...**************************** 

14. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tcagatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*. ...**************************** 

15. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
*.....**************************** 

16. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
attgaagcctgatgcgacgctgacgcgtcttatca	Protospacer
 *... **************************** 

17. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 6, identity: 0.829

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .*...**************************** 

18. spacer 2.3|1137015|31|NZ_CP032801|CRT matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 7, identity: 0.774

gcccaggg---atttgttcaatccagcgtgccgc	CRISPR spacer
---caaagtccatttgttcaacccatcgtgccgc	Protospacer
   **..*   **********.*** ********

19. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
cacgatgcctgatgcgacgctgccgcgtcttatca	Protospacer
. *...**************** *********** 

20. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tgcgctgcctgatgcgacgctaatgcgtcttatca	Protospacer
* *. .***************.*.********** 

21. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .....**************************** 

22. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.****************.*********** 

23. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*...**********************.***** 

24. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .....**************************** 

25. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.****************.*********** 

26. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*...**********************.***** 

27. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .....**************************** 

28. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.****************.*********** 

29. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*...**********************.***** 

30. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .....**************************** 

31. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . .*.****************.*********** 

32. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgacgctgacgcgttttatca	Protospacer
 .*...**********************.***** 

33. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accggtgccagatgcgacgcagacgcgtcttatca	Protospacer
 .*.*.*** ********** ************* 

34. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgacgctgacgcgtcttatca	Protospacer
 .....**************************** 

35. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
ccaggtgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. .*.****************.*********** 

36. spacer 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 8, identity: 0.742

tcaccaaaacagtgacaaaaactgtcaccaa	CRISPR spacer
tcaccaaaacagtgccaaagactcttgactg	Protospacer
************** ****.*** *.. * .

37. spacer 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 8, identity: 0.742

tcaccaaaacagtgacaaaaactgtcaccaa	CRISPR spacer
tcaccaaaacagtgccaaagactcttgactg	Protospacer
************** ****.*** *.. * .

38. spacer 2.1|1136893|31|NZ_CP032801|PILER-CR,CRT matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

tcaccaaaacagtgacaaaaactgtcaccaa	CRISPR spacer
tcaccaaaacggtgccaaaaactcttgactg	Protospacer
**********.*** ******** *.. * .

39. spacer 2.6|1137015|32|NZ_CP032801|CRISPRCasFinder matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 8, identity: 0.75

gcccaggg---atttgttcaatccagcgtgccgct	CRISPR spacer
---caaagtccatttgttcaacccatcgtgccgca	Protospacer
   **..*   **********.*** ******** 

40. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 8, identity: 0.852

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catccggcaatcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacaaa	Protospacer
**. * *** .* .***************** **********************

41. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 8, identity: 0.852

cacgccg-catcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-gctccgacgttcggtgcctgatgcgacgctggcgcgtcttatcaggcctacgag	Protospacer
 .* *** *.*.* **************************************.*.

42. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 8, identity: 0.852

cacgccgcatcctg-tgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-aggcaccgtgctgatgtctgatgcgacgctggcgcgtcttatcagacctacaaa	Protospacer
 * **  *.* *** **.****************************.********

43. spacer 4.1|2265006|44|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.818

ttggcagtgtgcctgatgcgacgctgttcgcgtcttaccaggcc	CRISPR spacer
tgcacaagatgcctgatgcgacgctgtccgcgtcttatcaggcc	Protospacer
*  .**. .******************.*********.******

44. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgccagatgcgacgctggcgcgtcttatct	Protospacer
 . ...*** ************.************

45. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...****************.*********** 

46. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

47. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

48. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

49. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

50. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgtcgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

51. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

52. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

53. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...****************.*********** 

54. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

55. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

56. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

57. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

58. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgtcgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

59. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

60. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

61. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...****************.*********** 

62. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

63. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

64. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

65. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

66. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgtcgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

67. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

68. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

69. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctggcgcgtcttatca	Protospacer
 . ...****************.*********** 

70. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

71. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

72. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

73. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctaacgcgtcttatca	Protospacer
 . ...***************.************ 

74. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gccgatgcctgatgcgtcgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

75. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

76. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
accgatgcctgatgcgccgctgacgcgacttatca	Protospacer
 .*...********** ********** ****** 

77. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
tgaattacctgatgcgacgctggcgcatcttatca	Protospacer
*  * ..***************.***.******* 

78. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatacgacgctgacgcgtcttatca	Protospacer
 . ...*******.******************** 

79. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. ...****************.*********** 

80. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatacgacgctgacgcgtcttatca	Protospacer
 . ...*******.******************** 

81. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
ccggatgcctgatgcgacgctggcgcgtcttatca	Protospacer
.. ...****************.*********** 

82. spacer 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 9, identity: 0.719

tcaccaaaacagtgacaaaaactgtcaccaaa	CRISPR spacer
tcaccaaaacagtgccaaagactcttgactgt	Protospacer
************** ****.*** *.. * . 

83. spacer 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 9, identity: 0.719

tcaccaaaacagtgacaaaaactgtcaccaaa	CRISPR spacer
tcaccaaaacagtgccaaagactcttgactgc	Protospacer
************** ****.*** *.. * . 

84. spacer 2.4|1136893|32|NZ_CP032801|CRISPRCasFinder matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tcaccaaaacagtgacaaaaactgtcaccaaa	CRISPR spacer
tcaccaaaacggtgccaaaaactcttgactgc	Protospacer
**********.*** ******** *.. * . 

85. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgcctgatgcgatgctaacgcgtcttatca	Protospacer
 .....***********.***.************ 

86. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . ...***************..*********** 

87. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . ...***************..*********** 

88. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . ...***************..*********** 

89. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gcagatgcctgatgcgacgctagcgcgtcttatca	Protospacer
 . ...***************..*********** 

90. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
acggatgcccgatgcgacgctggcgcgtcttatcg	Protospacer
 . ...***.************.*********** 

91. spacer 6.1|4695490|35|NZ_CP032801|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.743

ttcagcgcctgatgcgacgctgacgcgtcttatct	CRISPR spacer
gctgatgtctgatgcgacgctggcgcgtcttatca	Protospacer
 .....*.**************.*********** 

92. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.815

cacgccgcatcctg-tgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-cagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
   *.**..* * * ****************..**********************

93. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.815

cacgccgcatcctg-tgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-cagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
   *.**..* * * ****************..**********************

94. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.815

cacgcc-gcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-gcgctggtgccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
 .***. *...*  .****************************** *********

95. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.815

cacgcc-gcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-gcgctggtgccggatgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
 .***. *...*  .****************************** *********

96. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.815

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cattcggtgcacgatgcctgatgcgacgctgccgcgtcttatcaggcctacaaa	Protospacer
**. * *... * .***************** **********************

97. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.815

cacgccgcatcctg-tgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-cagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
   *.**..* * * ****************..**********************

98. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.815

cacgccgcatcctg-tgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
-cagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
   *.**..* * * ****************..**********************

99. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttatgcgcag------atgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************************** *********

100. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttgtacgcag------gtgcctgatgcgacgctggcgcgtcttatcatgcctacgag	Protospacer
      .**** *      ******************************* ******.*.

101. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttatgcgcag------atgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************************** *********

102. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttgtacgcag------gtgcctgatgcgacgctggcgcgtcttatcatgcctacgag	Protospacer
      .**** *      ******************************* ******.*.

103. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttatgcgcag------atgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************************** *********

104. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttgtacgcag------gtgcctgatgcgacgctggcgcgtcttatcatgcctacgag	Protospacer
      .**** *      ******************************* ******.*.

105. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttatgcgcag------atgcctgatgcgacgctggcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************************** *********

106. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.796

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagttgtacgcag------gtgcctgatgcgacgctggcgcgtcttatcatgcctacgag	Protospacer
      .**** *      ******************************* ******.*.

107. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.796

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catccggtaatcaatgcctgatgcgacgctgtcgcgtcttatcaggcctacagc	Protospacer
**. * *.* .* .***************** ********************. 

108. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgcgctg------atgcctgatgcgacgctgacgcgtcttatcatgcctacaaa	Protospacer
      ..***.*      .*****************.************ *********

109. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
taattgtgcgcag------atgcctgatgcgacgctagcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************.************* *********

110. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

111. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

112. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgcgctg------atgcctgatgcgacgctgacgcgtcttatcatgcctacaaa	Protospacer
      ..***.*      .*****************.************ *********

113. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
taattgtgcgcag------atgcctgatgcgacgctagcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************.************* *********

114. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

115. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

116. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgcgctg------atgcctgatgcgacgctgacgcgtcttatcatgcctacaaa	Protospacer
      ..***.*      .*****************.************ *********

117. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
taattgtgcgcag------atgcctgatgcgacgctagcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************.************* *********

118. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

119. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

120. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgcgctg------atgcctgatgcgacgctgacgcgtcttatcatgcctacaaa	Protospacer
      ..***.*      .*****************.************ *********

121. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
taattgtgcgcag------atgcctgatgcgacgctagcgcgtcttatcatgcctacaaa	Protospacer
      ..*** *      .****************.************* *********

122. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

123. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
cagtcgtgcgcag------atgcctgatgcgacgctaacgcgtcttatcaggcctacaaa	Protospacer
      ..*** *      .****************..**********************

124. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.778

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
caacaattaccaggtgcctgatgcgacgctggcgcgtcttatcatgcctacgag	Protospacer
**     .*.*  ******************************* ******.*.

125. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 12, identity: 0.778

------cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgcgctg------atgcctgatgcgacgctgacgcgtcttatcatgcctacaaa	Protospacer
      ..***.*      .*****************.************ *********

126. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 13, identity: 0.759

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
catttgtgctctgatgcctgatgcgacgctgacgcgtcttatcatgcctacaat	Protospacer
**. .    **. .*****************.************ ******** 

127. spacer 3.1|1728535|54|NZ_CP032801|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 14, identity: 0.741

cacgccgcatcctgtgcctgatgcgacgctggcgcgtcttatcaggcctacaaa	CRISPR spacer
tctccggcaattgaagcctgatgcgacgctgacgcgtcttatcaggcctacnag	Protospacer
. . * *** .. . ****************.******************* *.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1234169 : 1261891 33 Stx2-converting_phage(31.58%) tail,transposase,integrase,holin attL 1234115:1234174|attR 1256049:1257359
DBSCAN-SWA_2 1539508 : 1640305 118 Escherichia_phage(77.78%) tail,portal,integrase,capsid,tRNA,lysis,bacteriocin,transposase,holin,terminase attL 1543864:1543888|attR 1608551:1608575
DBSCAN-SWA_3 1855292 : 1939789 100 Enterobacteria_phage(53.33%) tail,portal,integrase,tRNA,protease,holin,terminase attL 1857767:1857787|attR 1915207:1915227
DBSCAN-SWA_4 2070607 : 2139144 71 Escherichia_phage(36.96%) tail,portal,integrase,head,transposase,holin,terminase attL 2091695:2091754|attR 2116291:2117600
DBSCAN-SWA_5 2197297 : 2218023 27 Enterobacteria_phage(78.26%) tail,transposase,integrase attL 2211159:2211172|attR 2221165:2221178
DBSCAN-SWA_6 2283981 : 2374397 110 Escherichia_phage(36.92%) tail,portal,integrase,tRNA,protease,holin,terminase attL 2296680:2296697|attR 2342979:2342996
DBSCAN-SWA_7 2594151 : 2689001 107 Enterobacteria_phage(31.75%) tail,portal,capsid,lysis,head,transposase,protease,holin,terminase NA
DBSCAN-SWA_8 2960245 : 3010952 63 Stx2-converting_phage(36.73%) tail,capsid,integrase,head,holin,terminase attL 2985723:2985736|attR 3012290:3012303
DBSCAN-SWA_9 3064129 : 3166669 113 Enterobacteria_phage(50.0%) tail,capsid,portal,integrase,tRNA,head,lysis,transposase,protease,holin,terminase attL 3094853:3094868|attR 3160572:3160587
DBSCAN-SWA_10 3172761 : 3278030 136 Stx2-converting_phage(32.46%) tail,capsid,portal,integrase,head,transposase,holin,terminase attL 3263597:3263617|attR 3284687:3284707
DBSCAN-SWA_11 3537150 : 3592763 71 Escherichia_phage(26.67%) tail,portal,head,transposase,protease,holin NA
DBSCAN-SWA_12 3700107 : 3710718 15 uncultured_Caudovirales_phage(25.0%) terminase,capsid,integrase attL 3701319:3701333|attR 3712137:3712151
DBSCAN-SWA_13 3832838 : 3872252 53 Enterobacteria_phage(48.84%) tail,portal,integrase,lysis,transposase,protease,holin,terminase attL 3832423:3832437|attR 3872326:3872340
DBSCAN-SWA_14 4451169 : 4491825 44 Escherichia_phage(30.0%) tail,transposase,integrase attL 4450740:4450754|attR 4488295:4488309
DBSCAN-SWA_15 4951828 : 5010839 60 Klosneuvirus(12.5%) protease,transposase NA
DBSCAN-SWA_16 5147719 : 5162384 19 Enterobacteria_phage(37.5%) tRNA,tail,integrase attL 5143560:5143575|attR 5161089:5161104
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP032802
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 8213 : 52657 42 Stx2-converting_phage(37.5%) protease,transposase,integrase attL 39168:39182|attR 58251:58265
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage