Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042324 Streptomyces coelicolor A3(2) strain CFB_NBC_0001 chromosome, complete genome 7 crisprs csa3,DEDDh,WYL,cas4,Cas9_archaeal,Cas14u_CAS-V,cas3,c2c9_V-U4,DinG 0 1 4 0

Results visualization

1. NZ_CP042324
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_1 3660347-3660444 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_2 4589570-4589671 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_3 5867903-5868059 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_4 5868362-5868517 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_5 6730936-6731020 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_6 7387803-7387883 Unclear NA
1 spacers
cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042324_7 8094905-8095002 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP042324_6 6.1|7387827|33|NZ_CP042324|CRISPRCasFinder 7387827-7387859 33 NZ_CP020041 Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence 158231-158263 5 0.848
NZ_CP042324_6 6.1|7387827|33|NZ_CP042324|CRISPRCasFinder 7387827-7387859 33 NZ_CP044425 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence 504612-504644 7 0.788

1. spacer 6.1|7387827|33|NZ_CP042324|CRISPRCasFinder matches to NZ_CP020041 (Streptomyces sp. 3211 isolate 3 plasmid p3211-2, complete sequence) position: , mismatch: 5, identity: 0.848

ggggcaggggcaggggcggttcggc--gccgggcg	CRISPR spacer
ggggcaggggcaggggcagttcggtcagcaggg--	Protospacer
*****************.******.  ** ***  

2. spacer 6.1|7387827|33|NZ_CP042324|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 7, identity: 0.788

ggggcaggggcaggggcggttcggcg---ccgggcg	CRISPR spacer
ggggcaggggcaggggctgctcggcggtttcgc---	Protospacer
***************** *.******   .**    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 6318 : 82441 56 uncultured_Caudovirales_phage(25.0%) integrase,transposase attL 6960:6976|attR 26465:26481
DBSCAN-SWA_2 3772263 : 3831574 60 Streptomyces_phage(18.18%) protease,transposase NA
DBSCAN-SWA_3 7019619 : 7067667 32 Staphylococcus_phage(14.29%) protease,transposase NA
DBSCAN-SWA_4 8609286 : 8661346 47 Tetraselmis_virus(50.0%) integrase,transposase attL 8637229:8637243|attR 8660744:8660758
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage