CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP042521	Klebsiella pneumoniae strain C2 plasmid pC2_001, complete sequence	0 crisprs	NA	1
NZ_CP042520	Klebsiella pneumoniae strain C2 chromosome, complete genome	1 crisprs	csa3,cas3,DEDDh,DinG,WYL	6
NZ_CP042523	Klebsiella pneumoniae strain C2 plasmid pC2_003, complete sequence	0 crisprs	NA	0
NZ_CP042522	Klebsiella pneumoniae strain C2 plasmid pC2_002, complete sequence	0 crisprs	DEDDh	1

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

45478 : 99468

Planktothrix_phage(14.29%)

transposase,protease,integrase

attL 65695:65715|attR 106758:106778

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152113.1\|45478_46441_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_004152114.1\|46427_46916_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_004152115.1\|47413_47611_-	hypothetical protein	NA	NA	NA	NA
WP_004152116.1\|47610_50406_-	heat shock survival AAA family ATPase ClpK	K4FB40	Cronobacter_phage	5.2e-129	41.0
WP_004152117.1\|50538_51108_-	small heat shock protein sHSP20	NA	NA	NA	NA
WP_004152118.1\|51142_51424_-	helix-turn-helix domain-containing protein	A0A1B1IUF9	uncultured_Mediterranean_phage	5.2e-05	38.2
WP_004118208.1\|51667_51931_-	hypothetical protein	NA	NA	NA	NA
WP_004118209.1\|51945_52209_+\|transposase	transposase	NA	NA	NA	NA
WP_004181997.1\|53359_54367_-	formamidase	NA	NA	NA	NA
WP_004181996.1\|54402_55092_-	urea ABC transporter ATP-binding subunit UrtE	G9BWD6	Planktothrix_phage	8.5e-17	29.6
WP_004181995.1\|55102_55852_-	urea ABC transporter ATP-binding protein UrtD	A0A2H4PQG7	Staphylococcus_phage	2.4e-17	26.4
WP_004181994.1\|55848_56964_-	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA
WP_004181993.1\|56973_57900_-	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA
WP_004197507.1\|57956_59147_-	urea ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004181991.1\|59451_62832_+	response regulator	A0A1V0SGX0	Hokovirus	1.7e-41	30.3
WP_004181990.1\|62794_63715_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-13	34.1
WP_072143344.1\|64711_65680_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.0e-173	91.6
65695:65715	attL	NA	NA	NA	NA
WP_080925134.1\|66493_66739_+	hypothetical protein	NA	NA	NA	NA
WP_004118832.1\|67590_69324_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-15	29.6
WP_004118225.1\|69331_70279_-	acetamidase/formamidase family protein	A0A1V0S8X7	Catovirus	9.6e-11	22.7
WP_004152278.1\|70323_71928_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004118227.1\|71940_72861_-	ABC transporter permease	NA	NA	NA	NA
WP_004118228.1\|72860_73709_-	ABC transporter permease	NA	NA	NA	NA
WP_004118229.1\|73705_74299_-	ANTAR domain-containing protein	NA	NA	NA	NA
WP_004118840.1\|74295_75423_-	transporter substrate-binding protein	NA	NA	NA	NA
WP_004118231.1\|75707_75875_-\|integrase	integrase	NA	NA	NA	NA
WP_004197062.1\|76977_77499_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_004197067.1\|77495_78449_+	fec operon regulator FecR	NA	NA	NA	NA
WP_029498502.1\|78541_80866_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_023157913.1\|80910_81813_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004118243.1\|81809_82808_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_004118246.1\|82804_83761_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004152282.1\|83761_84529_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_004118251.1\|84627_84921_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.7e-49	96.9
WP_071527925.1\|85251_85494_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000427614.1\|85791_86796_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_040251959.1\|88231_88447_-	hypothetical protein	NA	NA	NA	NA
WP_016831235.1\|88669_89752_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.4e-185	96.1
WP_004182121.1\|89873_92948_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_004182120.1\|92999_94253_+	lactose permease	NA	NA	NA	NA
WP_071527922.1\|94309_94480_+	galactoside O-acetyltransferase	NA	NA	NA	NA
WP_023313931.1\|95358_95619_-	DUF2534 family protein	NA	NA	NA	NA
WP_004182117.1\|95675_97739_-	TonB-dependent copper receptor	NA	NA	NA	NA
WP_015065566.1\|97821_98241_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_000537151.1\|99183_99468_+\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	4.7e-14	47.1
106758:106778	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP042520

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042520_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042520_1

4351261-4351355

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042520_1

>merge|NZ_CP042520|1|4351261-4351355|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP042520|1|1|4351261-4351355|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042520.1\|WP_023279864.1\|4338680_4340390_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP042520.1\|WP_032103829.1\|4354913_4357262_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP042520.1\|WP_021441191.1\|4342902_4345260_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP042520.1\|WP_004177431.1\|4360800_4361649_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP042520.1\|WP_002888337.1\|4353111_4353810_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP042520.1\|WP_021441192.1\|4340400_4341903_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP042520.1\|WP_130949151.1\|4337497_4338343_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP042520.1\|WP_021441189.1\|4349088_4349628_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP042520.1\|WP_002888332.1\|4353842_4354670_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP042520.1\|WP_002888327.1\|4358608_4359598_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP042520.1\|WP_032428530.1\|4345447_4348354_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP042520.1\|WP_002888320.1\|4361900_4362380_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP042520.1\|WP_002888345.1\|4349807_4351172_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP042520.1\|WP_002888373.1\|4336601_4337369_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP042520.1\|WP_002888323.1\|4360418_4360796_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP042520.1\|WP_002888353.1\|4342040_4342736_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP042520.1\|WP_004192048.1\|4351496_4353122_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP042520.1\|WP_002888324.1\|4359594_4360416_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP042520.1\|WP_002888348.1\|4348366_4349026_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP042520.1\|WP_002888329.1\|4357316_4358603_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
NZ_CP042520.1\|WP_023279864.1\|4338680_4340390_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP042520.1\|WP_032103829.1\|4354913_4357262_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP042520.1\|WP_021441191.1\|4342902_4345260_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP042520.1\|WP_004177431.1\|4360800_4361649_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP042520.1\|WP_002888337.1\|4353111_4353810_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP042520.1\|WP_021441192.1\|4340400_4341903_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP042520.1\|WP_130949151.1\|4337497_4338343_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP042520.1\|WP_021441189.1\|4349088_4349628_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	6.20047e-83
NZ_CP042520.1\|WP_002888332.1\|4353842_4354670_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP042520.1\|WP_002888327.1\|4358608_4359598_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP042520.1\|WP_032428530.1\|4345447_4348354_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP042520.1\|WP_002888320.1\|4361900_4362380_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP042520.1\|WP_002888345.1\|4349807_4351172_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP042520.1\|WP_002888373.1\|4336601_4337369_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP042520.1\|WP_002888323.1\|4360418_4360796_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP042520.1\|WP_002888353.1\|4342040_4342736_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP042520.1\|WP_004192048.1\|4351496_4353122_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	7.63459e-173
NZ_CP042520.1\|WP_002888324.1\|4359594_4360416_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP042520.1\|WP_002888348.1\|4348366_4349026_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP042520.1\|WP_002888329.1\|4357316_4358603_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>NZ_CP042520.1|WP_002888345.1|4349807_4351172_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP042520.1|WP_021441189.1|4349088_4349628_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQAGLISRQAQGEAMRRCLLCDEPAHACARSRRHDTGLVVARVEQMIDAWFARD
>NZ_CP042520.1|WP_002888348.1|4348366_4349026_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP042520.1|WP_032428530.1|4345447_4348354_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESKRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP042520.1|WP_021441191.1|4342902_4345260_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWSQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRTQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP042520.1|WP_002888353.1|4342040_4342736_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP042520.1|WP_021441192.1|4340400_4341903_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISNGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP042520.1|WP_023279864.1|4338680_4340390_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQTVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP042520.1|WP_130949151.1|4337497_4338343_-|arabinose-operon-transcriptional-regulator-AraC
MAEMQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP042520.1|WP_002888373.1|4336601_4337369_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP042520.1|WP_004192048.1|4351496_4353122_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>NZ_CP042520.1|WP_002888337.1|4353111_4353810_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP042520.1|WP_002888332.1|4353842_4354670_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP042520.1|WP_032103829.1|4354913_4357262_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSNTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP042520.1|WP_002888329.1|4357316_4358603_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP042520.1|WP_002888327.1|4358608_4359598_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP042520.1|WP_002888324.1|4359594_4360416_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP042520.1|WP_002888323.1|4360418_4360796_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP042520.1|WP_004177431.1|4360800_4361649_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKSLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP042520.1|WP_002888320.1|4361900_4362380_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

646862 : 704048

Salmonella_phage(60.0%)

holin,tail,lysis,integrase,tRNA,capsid,portal,plate,terminase,head

attL 656783:656798|attR 679716:679731

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058229178.1\|646862_647891_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	6.0e-192	97.9
WP_038807527.1\|647890_648466_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.2e-67	65.4
WP_071703894.1\|648598_648862_+	hypothetical protein	A0A218M4I5	Erwinia_phage	1.2e-43	96.6
WP_038807526.1\|648892_649402_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	2.6e-87	95.9
WP_038807553.1\|649409_649610_+	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	5.3e-28	90.9
WP_000963463.1\|649573_649912_+	hypothetical protein	A0A218M4I7	Erwinia_phage	7.3e-54	94.6
WP_038807525.1\|649979_650207_+	DUF2732 domain-containing protein	A0A218M4I9	Erwinia_phage	2.9e-30	97.3
WP_038807524.1\|650206_650428_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	2.1e-33	94.5
WP_038807523.1\|650429_652649_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	92.1
WP_050573333.1\|652763_653204_+	DinI family protein	A0A218M4I0	Erwinia_phage	7.0e-57	80.3
WP_050573332.1\|653302_654100_+	hypothetical protein	NA	NA	NA	NA
WP_151641666.1\|654162_654495_+	hypothetical protein	NA	NA	NA	NA
WP_038808226.1\|654467_655163_-	hypothetical protein	M1SV64	Escherichia_phage	5.6e-93	54.9
WP_019725382.1\|655617_655821_+\|tail	tail protein	S4TTA0	Salmonella_phage	9.5e-25	79.1
WP_019725381.1\|655825_656116_+\|holin	holin	A0A0M5M1H1	Salmonella_phage	5.0e-35	79.6
WP_038808228.1\|656102_656600_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	4.8e-78	85.8
WP_038808229.1\|656596_657016_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	9.7e-40	63.3
656783:656798	attL	NA	NA	NA	NA
WP_077263793.1\|656909_657161_+\|holin	holin	S4TNY4	Salmonella_phage	4.9e-23	70.0
WP_038808231.1\|657123_657591_+\|tail	phage tail protein	U5N0S7	Enterobacteria_phage	4.5e-62	72.9
WP_038808232.1\|657583_658033_+	phage virion morphogenesis protein	A0A218M4K4	Erwinia_phage	2.0e-43	62.6
WP_124982846.1\|658068_659316_-	hypothetical protein	NA	NA	NA	NA
WP_038808233.1\|659420_660062_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	4.9e-91	77.0
WP_038808234.1\|660058_660406_+\|plate	baseplate assembly protein	Q7Y4D7	Escherichia_virus	2.4e-44	76.5
WP_058229078.1\|660410_661319_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	2.4e-112	70.5
WP_058229077.1\|661311_661908_+\|tail	phage tail protein I	Q858V5	Yersinia_virus	2.5e-49	53.1
WP_023343301.1\|663903_664122_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	3.2e-34	88.9
WP_032439000.1\|664365_665451_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	5.3e-122	61.0
WP_048300117.1\|665454_666075_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	3.3e-36	38.5
WP_004144798.1\|666175_666412_+	hypothetical protein	NA	NA	NA	NA
WP_019704952.1\|666446_666956_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	4.1e-77	84.6
WP_019704179.1\|666963_667164_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.3e-26	84.6
WP_004174279.1\|667127_667469_+	hypothetical protein	A0A1S6L019	Salmonella_phage	1.1e-49	86.7
WP_032414758.1\|667536_667770_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	1.6e-31	93.5
WP_151641667.1\|667769_667997_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	3.6e-33	86.7
WP_151641668.1\|667993_668881_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	6.5e-110	70.4
WP_151641669.1\|668861_671267_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	89.2
WP_004144689.1\|671439_671628_+	hypothetical protein	A0A1S6L006	Salmonella_phage	7.9e-26	98.4
WP_024623050.1\|671642_671876_+	DinI family protein	A0A1S6L014	Salmonella_phage	7.8e-31	84.4
WP_004174290.1\|671951_672209_+	hypothetical protein	NA	NA	NA	NA
WP_038421825.1\|672510_673578_+	hypothetical protein	NA	NA	NA	NA
WP_032431240.1\|673574_673895_+	STAS-like domain-containing protein	NA	NA	NA	NA
WP_024623047.1\|673900_674389_+	hypothetical protein	NA	NA	NA	NA
WP_151641670.1\|674472_675498_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.9e-174	88.2
WP_004185719.1\|675497_677261_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	93.0
WP_109885916.1\|677401_678235_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	1.0e-101	76.5
WP_019704960.1\|678251_679316_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	4.3e-185	94.3
WP_151641671.1\|679319_679970_+	hypothetical protein	E5G6M7	Salmonella_phage	2.1e-102	86.1
679716:679731	attR	NA	NA	NA	NA
WP_107357672.1\|680066_680531_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.6e-75	86.4
WP_002896155.1\|680530_680734_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_004144702.1\|680737_680953_+	hypothetical protein	E5G6N0	Salmonella_phage	1.0e-29	88.7
WP_019704195.1\|680933_681443_+	lysozyme	E5G6N1	Salmonella_phage	3.3e-82	84.6
WP_151641672.1\|681447_681831_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.8e-17	44.5
WP_151641673.1\|681827_682256_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.6e-50	77.9
WP_121936562.1\|682351_682783_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.7e-63	81.8
WP_151641674.1\|682775_683222_+	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	6.7e-55	79.3
WP_023305005.1\|683290_683863_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.0e-76	71.7
WP_004174325.1\|683859_684222_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.9e-49	84.7
WP_023305004.1\|684208_685117_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	9.9e-106	66.9
WP_151641771.1\|685109_685712_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.1e-58	61.0
WP_151641675.1\|685805_688601_+	hypothetical protein	A0A0S1S5D9	Klebsiella_phage	2.1e-239	51.7
WP_073511241.1\|688608_689445_+	hypothetical protein	A0A0S1S106	Klebsiella_phage	1.1e-103	66.5
WP_151641676.1\|689460_690531_+\|tail	phage tail protein	A0A2H4J931	uncultured_Caudovirales_phage	1.2e-30	45.1
WP_109885823.1\|690669_691842_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	2.8e-209	93.1
WP_064146903.1\|691851_692367_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.4e-82	85.4
WP_004144716.1\|692419_692719_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.6e-33	80.0
WP_002896220.1\|692733_692853_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_151641677.1\|692845_695473_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_004185683.1\|695469_695955_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.1e-58	77.6
WP_032438995.1\|695951_697049_+	phage late control D family protein	E5G6Q3	Salmonella_phage	1.8e-173	84.4
WP_072001509.1\|697119_697338_+	levansucrase regulator	Q53ZE7	Salmonella_virus	8.3e-27	72.2
WP_032438994.1\|697344_697731_-	hypothetical protein	NA	NA	NA	NA
WP_002917636.1\|698058_698565_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_004174339.1\|698664_700506_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
WP_004149864.1\|700724_702470_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.6e-75	38.7
WP_001144069.1\|702581_702797_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_040237763.1\|703034_704048_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.4e-108	58.9

DBSCAN-SWA_2

1657765 : 1664672

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1657765_1658629_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_023301146.1\|1658639_1659413_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-26	37.2
WP_002912636.1\|1659655_1660549_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1660794_1662156_-	U32 family peptidase	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1662474_1663197_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004149058.1\|1663193_1664672_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

1807582 : 1847279

Klebsiella_phage(29.55%)

holin,tail,integrase,protease,portal,terminase

attL 1800902:1800915|attR 1811687:1811700

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1800902:1800915	attL	NA	NA	NA	NA
WP_151641685.1\|1807582_1808617_-\|integrase	tyrosine-type recombinase/integrase	K7PLZ2	Enterobacterial_phage	1.2e-123	64.0
WP_071925326.1\|1808616_1808847_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_040188683.1\|1808913_1809105_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	7.3e-27	88.9
WP_151641686.1\|1809101_1809887_-	hypothetical protein	A4JX52	Burkholderia_virus	1.4e-60	49.8
WP_004206651.1\|1809886_1810186_-	hypothetical protein	NA	NA	NA	NA
WP_151641687.1\|1810548_1811244_-	helix-turn-helix domain-containing protein	Q8HAA0	Salmonella_phage	2.1e-87	72.0
WP_001191665.1\|1811341_1811584_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
WP_004206654.1\|1811618_1812080_+	hypothetical protein	K7PJS5	Enterobacterial_phage	6.4e-69	88.2
1811687:1811700	attR	NA	NA	NA	NA
WP_071994923.1\|1812317_1812530_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.9e-16	72.7
WP_151641688.1\|1812486_1813401_+	transcriptional regulator	H2DE83	Erwinia_phage	5.2e-30	58.7
WP_151641689.1\|1813397_1814207_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	3.1e-111	70.0
WP_151641690.1\|1814216_1814594_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.5e-47	72.8
WP_151641691.1\|1814606_1815587_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.4e-135	66.9
WP_064169098.1\|1815605_1815968_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	2.2e-56	88.5
WP_064169099.1\|1815957_1816536_-	hypothetical protein	S5FXQ0	Shigella_phage	1.1e-57	60.7
WP_064169100.1\|1816543_1817572_-	hypothetical protein	S5FNT5	Shigella_phage	2.5e-113	57.6
WP_057182115.1\|1818057_1818357_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	1.5e-39	84.8
WP_151641692.1\|1818353_1818893_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	9.7e-101	98.3
WP_151641693.1\|1818889_1819237_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.7e-40	80.0
WP_151641694.1\|1819233_1819509_+	hypothetical protein	G8C7W1	Escherichia_phage	6.4e-24	70.8
WP_109139490.1\|1819459_1819654_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	2.9e-23	82.8
WP_085840993.1\|1819711_1820074_+	hypothetical protein	NA	NA	NA	NA
WP_151641695.1\|1820197_1820857_+	DUF2441 domain-containing protein	I6PCV9	Cronobacter_phage	3.9e-43	40.6
WP_151641696.1\|1820975_1821221_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	6.1e-18	64.2
WP_107334310.1\|1821446_1821707_+	hypothetical protein	NA	NA	NA	NA
WP_071556674.1\|1821773_1821959_+	hypothetical protein	Q8W634	Enterobacteria_phage	1.2e-10	59.3
WP_151641697.1\|1822279_1822771_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	9.2e-66	82.8
WP_040225562.1\|1822770_1824879_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.3
WP_020317294.1\|1824875_1825091_+	hypothetical protein	A5LH28	Enterobacteria_phage	7.7e-25	77.1
WP_020317329.1\|1825087_1826587_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.1e-247	83.6
WP_151641772.1\|1826531_1828547_+\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	84.5
WP_151641698.1\|1828627_1828954_+	DUF2190 family protein	K7PJY3	Enterobacterial_phage	6.2e-34	68.2
WP_020317349.1\|1828946_1829240_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_020317346.1\|1829229_1829781_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	5.3e-54	67.9
WP_020804325.1\|1829777_1830176_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	3.2e-40	57.8
WP_023304948.1\|1830183_1830666_+	hypothetical protein	M9NYX0	Enterobacteria_phage	5.7e-60	68.6
WP_025714420.1\|1830708_1831104_+\|tail	phage tail protein	M9NZD7	Enterobacteria_phage	1.9e-08	27.5
WP_032420719.1\|1831124_1831442_+\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.4e-19	51.5
WP_151641699.1\|1831422_1834119_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	9.2e-200	62.1
WP_071961347.1\|1834118_1834592_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.7e-53	60.9
WP_151641700.1\|1834578_1835061_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.1e-82	96.9
WP_151641701.1\|1835070_1835451_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	3.1e-69	94.4
WP_151641702.1\|1835447_1838516_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	96.1
WP_151641703.1\|1838592_1841319_+	hypothetical protein	A0A0S1S5D9	Klebsiella_phage	3.7e-241	54.0
WP_151641704.1\|1841327_1842164_+	hypothetical protein	A0A0S1S106	Klebsiella_phage	8.3e-99	64.7
WP_151641705.1\|1842233_1844690_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	5.7e-31	61.5
WP_151641706.1\|1844781_1845330_+	helix-turn-helix domain-containing protein	A0A286S1P7	Klebsiella_phage	2.7e-90	95.6
WP_004179627.1\|1845592_1846012_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	58.3
WP_151641707.1\|1846013_1847279_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	7.9e-210	83.6

DBSCAN-SWA_4

2666359 : 2677246

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071068227.1\|2666359_2669467_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.5
WP_004176258.1\|2669521_2670787_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2670817_2671906_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004176262.1\|2671992_2672253_-	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_063864695.1\|2672550_2673411_+	class A broad-spectrum beta-lactamase SHV-61	A0A077SL40	Escherichia_phage	6.4e-155	99.0
WP_002210513.1\|2673431_2674193_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002903955.1\|2674453_2675356_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_004224682.1\|2675367_2676633_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	7.8e-234	99.8
WP_071068229.1\|2676625_2677246_+	aldolase	A0A077SK32	Escherichia_phage	1.8e-114	99.5

DBSCAN-SWA_5

3072343 : 3135160

Enterobacteria_phage(16.39%)

holin,tail,lysis,integrase,tRNA,protease,capsid,portal,terminase,head

attL 3084770:3084785|attR 3136829:3136844

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004892953.1\|3072343_3072496_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_071592550.1\|3073028_3073838_-	chaperonin	A0A0F7L9X0	Escherichia_phage	7.9e-139	82.9
WP_110218392.1\|3074084_3074762_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.8e-81	60.8
WP_080819783.1\|3074954_3075845_-	HNH endonuclease	K7PK19	Enterobacteria_phage	4.3e-162	91.9
WP_071195274.1\|3075841_3077419_-	AAA family ATPase	K7PHD1	Enterobacteria_phage	5.3e-288	95.4
WP_151641730.1\|3077683_3078949_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.1e-208	83.4
WP_151641731.1\|3078950_3079370_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	58.3
WP_074188108.1\|3079919_3080342_-	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
WP_074188109.1\|3080419_3080590_-	helix-turn-helix domain-containing protein	A0A286S1P7	Klebsiella_phage	1.8e-16	80.0
WP_151641732.1\|3080682_3082473_-	AAA family ATPase	NA	NA	NA	NA
WP_114507509.1\|3082907_3083033_-	recombinase RecA	F8SJ86	Pseudomonas_phage	3.9e-05	41.5
WP_151641733.1\|3083094_3083922_-	hypothetical protein	A0A0S1S106	Klebsiella_phage	4.0e-69	49.6
3084770:3084785	attL	NA	NA	NA	NA
WP_151641734.1\|3086718_3089796_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	61.9
WP_038808159.1\|3089792_3090173_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.3e-56	79.4
WP_004177130.1\|3090185_3090662_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	4.8e-51	65.8
WP_004884312.1\|3090648_3091122_-	hypothetical protein	A0A286S298	Klebsiella_phage	1.1e-55	62.7
WP_151641735.1\|3091143_3094530_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	1.6e-297	57.0
WP_016530182.1\|3094590_3094824_-	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_038808155.1\|3094897_3095203_-	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	1.4e-27	63.6
WP_046879074.1\|3095205_3095610_-\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	1.9e-32	56.9
WP_025713380.1\|3095640_3096345_-	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	1.6e-79	66.9
WP_025713381.1\|3096401_3096749_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	1.8e-31	61.9
WP_040241939.1\|3096745_3097195_-	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	5.1e-63	82.6
WP_151641774.1\|3097191_3097530_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	5.6e-38	70.5
WP_032734570.1\|3097542_3097875_-\|head,tail	phage gp6-like head-tail connector protein	Q6JIM5	Burkholderia_virus	8.8e-12	31.6
WP_101856656.1\|3097880_3098135_-	hypothetical protein	NA	NA	NA	NA
WP_080917171.1\|3098180_3099401_-\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	8.3e-140	64.0
WP_040241930.1\|3099410_3100118_-\|head,protease	HK97 family phage prohead protease	Q6JIM8	Burkholderia_virus	2.9e-68	63.5
WP_042947687.1\|3100093_3101413_-\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	1.9e-137	58.6
WP_151641736.1\|3101419_3103156_-\|terminase	phage terminase small subunit P27 family	A0A0U2C138	Paracoccus_phage	1.7e-138	45.3
WP_151641737.1\|3103109_3103574_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	3.7e-48	62.7
WP_151641738.1\|3103756_3104098_-	HNH endonuclease	K7P7P4	Enterobacteria_phage	5.1e-47	73.0
WP_085803441.1\|3104566_3104896_+	hypothetical protein	NA	NA	NA	NA
WP_085803442.1\|3104970_3105162_-	hypothetical protein	NA	NA	NA	NA
WP_085803446.1\|3105233_3105479_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.5e-16	59.7
WP_049026358.1\|3105594_3105888_-	hypothetical protein	NA	NA	NA	NA
WP_124034771.1\|3106017_3106236_-	hypothetical protein	NA	NA	NA	NA
WP_151641739.1\|3106335_3106725_-	hypothetical protein	Q71TL7	Escherichia_phage	1.9e-26	48.4
WP_085803443.1\|3106809_3107298_-	hypothetical protein	NA	NA	NA	NA
WP_114148246.1\|3107368_3107500_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	6.5e-11	82.1
WP_085803444.1\|3107481_3107772_-	hypothetical protein	A0A1P8DTP0	Salmonella_phage	3.5e-20	51.2
WP_040088892.1\|3107856_3108045_+	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_087759902.1\|3108068_3108536_-\|lysis	lysis protein	A0A1V0E5Q6	Salmonella_phage	4.1e-55	72.9
WP_040088890.1\|3108532_3109012_-	glycoside hydrolase family 104 protein	A5VW81	Enterobacteria_phage	8.4e-72	84.3
WP_004899663.1\|3109104_3109386_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.9e-32	72.0
WP_032421481.1\|3109372_3109768_-	membrane protein	G8C7V8	Escherichia_phage	5.5e-45	72.3
WP_035942517.1\|3110011_3110227_-	hypothetical protein	NA	NA	NA	NA
WP_151641775.1\|3110532_3111300_-	hypothetical protein	J7KHM1	Erwinia_phage	2.2e-106	75.1
WP_064279091.1\|3111635_3111923_+	hypothetical protein	NA	NA	NA	NA
WP_151641740.1\|3111967_3113020_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	4.6e-171	79.0
WP_048290386.1\|3113169_3113361_-	TrmB family transcriptional regulator	Q8SBE3	Shigella_phage	4.1e-22	82.5
WP_060598778.1\|3113570_3114401_-	antitermination protein	K7P7B9	Enterobacteria_phage	2.2e-59	46.9
WP_108451513.1\|3114419_3115406_-	DUF968 domain-containing protein	Q8SBE5	Shigella_phage	3.4e-91	48.9
WP_117067446.1\|3115487_3116309_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	1.8e-90	65.8
WP_151641741.1\|3116398_3116797_-	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	3.1e-43	69.7
WP_117067445.1\|3116793_3117270_-\|protease	SOS-response repressor and protease LexA	U5P451	Shigella_phage	1.4e-15	61.8
WP_151641742.1\|3117266_3119117_-	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	1.6e-198	52.5
WP_151641743.1\|3119109_3120492_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.4e-106	48.8
WP_151641744.1\|3120479_3120938_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_135686824.1\|3120934_3121846_-	GntR family transcriptional regulator	A0A1C9IHW0	Salmonella_phage	3.4e-53	74.5
WP_023322342.1\|3121835_3122015_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.6e-13	67.3
WP_064081445.1\|3122187_3122739_-	hypothetical protein	A0A1C9II13	Salmonella_phage	3.8e-68	69.4
WP_023343174.1\|3122783_3122984_-	hypothetical protein	U5P445	Shigella_phage	4.3e-22	80.0
WP_032429029.1\|3123071_3123731_+	LexA family transcriptional regulator	U5P0T5	Shigella_phage	1.2e-113	87.2
WP_060853925.1\|3124046_3124505_-	hypothetical protein	NA	NA	NA	NA
WP_041937773.1\|3125407_3125779_+	hypothetical protein	Q8HAA1	Salmonella_phage	7.7e-57	88.6
WP_048323715.1\|3125825_3126653_+	YfdQ family protein	Q8HAA2	Salmonella_phage	9.3e-111	71.3
WP_041937772.1\|3127129_3127657_+	hypothetical protein	A0A192Y8M4	Salmonella_phage	1.0e-62	69.1
WP_032701051.1\|3127656_3127857_+	hypothetical protein	NA	NA	NA	NA
WP_008806037.1\|3127849_3128635_+	hypothetical protein	A4JX52	Burkholderia_virus	3.8e-61	50.2
WP_032701050.1\|3128762_3129227_+	hypothetical protein	R9TME7	Aeromonas_phage	1.0e-10	39.1
WP_008806035.1\|3129223_3129493_+	hypothetical protein	NA	NA	NA	NA
WP_086624261.1\|3129595_3129871_+	hypothetical protein	K7PKM4	Enterobacterial_phage	1.5e-09	40.4
WP_008806034.1\|3129899_3130136_+	excisionase	NA	NA	NA	NA
WP_008806033.1\|3130125_3131268_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	1.2e-172	81.9
WP_004150800.1\|3131380_3132631_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_004150801.1\|3132871_3133522_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_021313538.1\|3133538_3133997_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3134053_3135160_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
3136829:3136844	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3397682 : 3407145

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004224003.1\|3397682_3399404_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3399448_3400150_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3400503_3400722_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_038808049.1\|3400841_3403121_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	3.7e-165	42.2
WP_002896520.1\|3403151_3403469_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3403794_3404016_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3404092_3406033_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_038808052.1\|3406029_3407145_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP042522

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2110 : 36530

Escherichia_phage(37.5%)

transposase,integrase,protease

attL 1913:1972|attR 22534:23488

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1913:1972	attL	NA	NA	NA	NA
WP_001067834.1\|2110_2815_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_014344500.1\|2848_3121_-	hypothetical protein	NA	NA	NA	NA
WP_000845039.1\|3089_4103_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015060105.1\|4255_4996_+	subclass B1 metallo-beta-lactamase IMP-4	NA	NA	NA	NA
WP_015063357.1\|5227_5560_+	quaternary ammonium compound efflux SMR transporter QacG2	NA	NA	NA	NA
WP_003159191.1\|5686_6241_+	aminoglycoside N-acetyltransferase AAC(6')-Ib4	NA	NA	NA	NA
WP_000186237.1\|6335_6968_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
WP_000679427.1\|7124_7472_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|7465_8305_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|8709_10251_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003833285.1\|11557_12010_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
WP_012695489.1\|12051_12696_-	quinolone resistance pentapeptide repeat protein QnrB2	NA	NA	NA	NA
WP_000259031.1\|13186_14026_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_001993321.1\|13955_14135_-	hypothetical protein	NA	NA	NA	NA
WP_004883563.1\|14153_14426_+	hypothetical protein	NA	NA	NA	NA
WP_000427614.1\|14607_15612_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000184001.1\|15839_17045_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|17055_17361_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024143553.1\|17376_17559_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|17587_18352_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001336397.1\|18542_18899_-	hypothetical protein	NA	NA	NA	NA
WP_001137892.1\|18844_19429_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|19428_20667_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|20663_21569_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067834.1\|21690_22395_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000557454.1\|22627_23488_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
22534:23488	attR	NA	NA	NA	NA
WP_000587837.1\|23500_24043_+	AAA family ATPase	NA	NA	NA	NA
WP_000951934.1\|24524_24716_-	hypothetical protein	NA	NA	NA	NA
WP_001330846.1\|24721_24967_+	hypothetical protein	NA	NA	NA	NA
WP_000080861.1\|25017_26154_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000971921.1\|26268_27639_+\|transposase	IS1182-like element ISCfr1 family transposase	NA	NA	NA	NA
WP_000027057.1\|28459_29320_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_011091091.1\|29988_30498_-	transcriptional regulator	NA	NA	NA	NA
WP_011091092.1\|30545_32633_-	hypothetical protein	NA	NA	NA	NA
WP_012579091.1\|32645_33596_-	DsbC family protein	NA	NA	NA	NA
WP_045626305.1\|33606_34869_-	hypothetical protein	NA	NA	NA	NA
WP_077256341.1\|34913_35189_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_045626302.1\|35413_35797_-	DUF1496 domain-containing protein	NA	NA	NA	NA
WP_011091025.1\|35876_36530_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042521

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP042520

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP042522

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection