CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP042547	Klebsiella michiganensis strain C52 plasmid pC52_002, complete sequence	0 crisprs	RT	0	2
NZ_CP042550	Klebsiella michiganensis strain C52 plasmid pC52_005, complete sequence	0 crisprs	NA	0	0
NZ_CP042546	Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence	0 crisprs	csa3,cas3	0	1
NZ_CP042545	Klebsiella michiganensis strain C52 chromosome, complete genome	4 crisprs	cas14j,csa3,RT,cas3,DEDDh,DinG,WYL	2	4
NZ_CP042549	Klebsiella michiganensis strain C52 plasmid pC52_004, complete sequence	0 crisprs	NA	0	0
NZ_CP042548	Klebsiella michiganensis strain C52 plasmid pC52_003, complete sequence	1 crisprs	NA	1	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042545_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042545_1

428869-428959

Orphan

Consensus_repeat	Method
TCCGGGCTACCCGAACGCAGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042545_1

>merge|NZ_CP042545|1|428869-428959|CRISPRCasFinder
TCCGGGCTACCCGAACGCAGGCGGCTGTGAAGCGGATTGAATCCCCCGGATGGCGGCTGTCGCCTTATCCGGGCTACCCGATCGCAGGCGG

>NZ_CP042545|1|1|428869-428959|CRISPRCasFinder
TCCGGGCTACCCGAACGCAGGCGG	CTGTGAAGCGGATTGAATCCCCCGGATGGCGGCTGTCGCCTTA
TCCGGGCTACCCGATCGCAGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042545.1\|WP_032695125.1\|436150_436930_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|225130
NZ_CP042545.1\|WP_014227299.1\|417963_418272_-\|cytotoxin	unknown	unknown	gnl\|CDD\|376629
NZ_CP042545.1\|WP_014839817.1\|434574_435435_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP042545.1\|WP_014227293.1\|426829_427954_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_CP042545.1\|WP_085955001.1\|416910_417792_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP042545.1\|WP_014227282.1\|436944_437898_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|181818
NZ_CP042545.1\|WP_032695129.1\|429753_431250_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP042545.1\|WP_038423880.1\|418616_420050_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|181971
NZ_CP042545.1\|WP_038423876.1\|432263_432884_+\|phosphatase	unknown	unknown	gnl\|CDD\|226105
NZ_CP042545.1\|WP_014227294.1\|423722_426830_-\|multidrug-efflux-RND-transporter-permease-subunit-EefB	unknown	unknown	gnl\|CDD\|273335
NZ_CP042545.1\|WP_014839827.1\|422354_423719_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|182103
NZ_CP042545.1\|WP_014227287.1\|433014_433485_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP042545.1\|WP_014227286.1\|433740_434550_+\|lipoprotein-NlpA	unknown	unknown	gnl\|CDD\|182119
NZ_CP042545.1\|WP_038423879.1\|420074_420977_-\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_CP042545.1\|WP_014227291.1\|429025_429673_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP042545.1\|WP_014839828.1\|421137_422304_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP042545.1\|WP_038423877.1\|431246_432161_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176160
NZ_CP042545.1\|WP_038423875.1\|435426_435981_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP042545.1\|WP_038423878.1\|428407_428824_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP042545.1\|WP_014227298.1\|418274_418511_-\|antitoxin	unknown	unknown	gnl\|CDD\|377822

Protein	Function_ID	Function_description	E-value
NZ_CP042545.1\|WP_032695125.1\|436150_436930_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	3.98085e-19
NZ_CP042545.1\|WP_014227299.1\|417963_418272_-\|cytotoxin	gnl\|CDD\|376629	pfam01845, CcdB, CcdB protein.	9.48804e-43
NZ_CP042545.1\|WP_014839817.1\|434574_435435_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.86137e-13
NZ_CP042545.1\|WP_014227293.1\|426829_427954_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	3.38386e-112
NZ_CP042545.1\|WP_085955001.1\|416910_417792_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.23548e-50
NZ_CP042545.1\|WP_014227282.1\|436944_437898_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|181818	PRK09393, ftrA, transcriptional activator FtrA; Provisional.	2.3633e-104
NZ_CP042545.1\|WP_032695129.1\|429753_431250_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.16729e-70
NZ_CP042545.1\|WP_038423880.1\|418616_420050_-\|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC	gnl\|CDD\|181971	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed.	0
NZ_CP042545.1\|WP_038423876.1\|432263_432884_+\|phosphatase	gnl\|CDD\|226105	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only].	7.41708e-13
NZ_CP042545.1\|WP_014227294.1\|423722_426830_-\|multidrug-efflux-RND-transporter-permease-subunit-EefB	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP042545.1\|WP_014839827.1\|422354_423719_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|182103	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein.	6.39623e-100
NZ_CP042545.1\|WP_014227287.1\|433014_433485_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	5.44062e-96
NZ_CP042545.1\|WP_014227286.1\|433740_434550_+\|lipoprotein-NlpA	gnl\|CDD\|182119	PRK09861, PRK09861, lipoprotein NlpA.	0
NZ_CP042545.1\|WP_038423879.1\|420074_420977_-\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	8.90289e-175
NZ_CP042545.1\|WP_014227291.1\|429025_429673_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.23396e-14
NZ_CP042545.1\|WP_014839828.1\|421137_422304_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.22831e-84
NZ_CP042545.1\|WP_038423877.1\|431246_432161_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176160	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 2. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.97744e-89
NZ_CP042545.1\|WP_038423875.1\|435426_435981_-\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	4.79329e-36
NZ_CP042545.1\|WP_038423878.1\|428407_428824_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.90495e-11
NZ_CP042545.1\|WP_014227298.1\|418274_418511_-\|antitoxin	gnl\|CDD\|377822	pfam07362, CcdA, Post-segregation antitoxin CcdA. This family consists of several Enterobacterial post-segregation antitoxin CcdA proteins. The F plasmid-carried bacterial toxin, the CcdB protein, is known to act on DNA gyrase in two different ways. CcdB poisons the gyrase-DNA complex, blocking the passage of polymerases and leading to double-strand breakage of the DNA. Alternatively, in cells that overexpress CcdB, the A subunit of DNA gyrase (GyrA) has been found as an inactive complex with CcdB. Both poisoning and inactivation can be prevented and reversed in the presence of the F plasmid-encoded antidote, the CcdA protein.	8.08152e-21

>NZ_CP042545.1|WP_038423878.1|428407_428824_+|GNAT-family-N-acetyltransferase
MTLIITENINPADQEELLAGLREYNLRFLDPAQFGELGVYSRDDAGAMRGGLIGKRKGSWLCIDYLWVSEASRGSGLGSELMHEAENQARARGCSHVLVDTFSFQALPFYQKLGYQLQMSLPDFPHVGMQRHYVSKVL
>NZ_CP042545.1|WP_014227293.1|426829_427954_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKYTLAPIAAALFLLSGCDNAQNASPQQMTQEVGVVTLHGQPVPVVSSLTGRTTASLSAEVRPQVGGIVQKRLFTEGDMVKAGQALYQIDPSSYRATFNEAAASLKQAQALVIADCQKAQRYAVLVKDNGVSRQDADDAIATCNQDKASVESKKAALESARINLNWTTVTAPIAGRIGISSVTPGALVSADQDTALATIRGLDTMYVDLTRSSVDLLRLRKQSLASNSDTLNVTLTLEDGSTYSEKGRLALTEVAVDESTGSVTLRAVFPNPQHVLLPGMFVRARIDEGIMNDAILAPQQGITRDAKGDATALVVDANNKVEQRSVETGETYGDKWLIVNGLKSGDRLIVEGTGKVAPGQQVKAAEVKNDGGNA
>NZ_CP042545.1|WP_014227294.1|423722_426830_-|multidrug-efflux-RND-transporter-permease-subunit-EefB
MFSRFFVRRPVFAWVIAILIMLAGILAIRTLPVAQYPDVAPPAIKISATYTGASAETLENSVTQVIEQQLTGLDNLLYFTSTSSSDGSVSITVTFEQGTDPDTAQVQVQNKVQQAESRLPSEVQQSGVTVEKSQSSFLLILAVYDKNNKATSSDISDWLVSNMQDPMARIEGVGSLQVFGAEYAMRIWMDPTKLASYSLMPSDVQSAIEAQNVQVSAGKIGALPASNAQQLTATVRAQSRLQTVAQFKEIIVKSKSDGSVVRLSDVARVEMGSEDYTASANLNGHPAAGIAVMMAPGANALNTATLVKNKIAEFQRQMPQGYDIAYPKDSTEFIKISVEDVIQTLFEAIILVVCVMYLFLQNFRATLIPAVAVPVVLLGTFGVLALFGYSINTLTLFAMVLAIGLLVDDAIVVVENVERIMRDEGLPAREATEKSMGEISGALIAIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAMMLSVVVALTLTPALCGALLSHSKPHTKGFFGAFNRLWGRTEQGYQHRVVGGLRRSAMMMGAFVLICGGMALAMWKLPGSFLPTEDQGEIMVQYTLPAGATAVRTAEVRRQVTDWFLTKEKANTDVIFTVDGFSFSGSGQNAGMAFVSLKNWSERKGEENTAQAIALRATKELGGIRDATLFAMTPPSVDGLGQSNGFTFELLASGGTDRDSLMKMRSQLLAAANQSTELQSVRANDLPQMPQLQVDIDNNKAVSLGLSLSDVTDTLSSAWGGTYVNDFIDRGRVKKVYIQGESDARAVPSDLGKWFVRGSDDSMTPFSAFATTRWQYGPESLVRYNGSAAFEIQGENASGFSSGAAMDKMEALANNLPAGTTWAWSGMSLQEKLASGQAMSLYAISILVVFLCLAALYESWSVPFSVIMVIPLGLLGAALAAWMRGLSNDVYFQVALLTTIGLSSKNAILIVEFAESAVEEGYSLSRAAMRAAQTRLRPIVMTSLAFIAGVLPLAIATGAGANSRVAIGTGIIGGTLTATLLAVFFVPLFFVLVKRFFTRHRSSQE
>NZ_CP042545.1|WP_014839827.1|422354_423719_-|efflux-transporter-outer-membrane-subunit
MFRFTLVFVALLTAGCVSLDPHYERPAAPVPATLPGSHGEATAVVSDWQQVVNDARLKKVVNIALTSNRDVQKALADIEAARAQFGETRASLFPTLDAELSHTRSKTVASGLTSSAEADGAVSSFELDLFGKNQSLTRAARETWLASEFTAQNTRLTMIADLTTAWITLAADNSNLALAQDTMASAENSRRIVTRQMEVGTASAGDLSDAESVYQQARASVASYRTLVAQDKNALNLLAGETVPDSLLPGTLESLGDRSITLVPAGVSSSVLLRRPDIQEAEHNLKSANADIGAARANFFPSISLTASAGVGSDSLSSLFSHGMQVWSFAPSISLPLFTGGSNLAQLRYAEAEKKGLIATYEKTIQSAFKDVADALARRETLSEQLDAQNKYVAAEQKSLNIAMKSYQAGVGDYLSVLTAQRTLWSAQATLISLQQTDLENRITLWQSLGGGAS
>NZ_CP042545.1|WP_014839828.1|421137_422304_-|multidrug-effflux-MFS-transporter
MSRISLSWVVVLGLLSAIGPLCTDFYLPALPEITQQLSATGTQTQLSLTAALIGLGLGQLFFGPLSDRIGRKKPLALSLLLFIFSSAMCAITYDIHMLIAWRFLQGFAGAGGSVLSRSIARDRYQGTLLTQFFALLMTVNGIAPVLSPVLGGWIITAFDWRILFWAMAAIGVVLLLLSLTVLHETLPAKSTASATRQQADAPVLKNRRFMRYCLIQAFMMAGLFSYIGSSSFVIQSEYAMSAMQFSLLFGLNGIGLIIAALIFSRLARRFSAEALLRGGQLLAVAFAAITLLVAWLPQPTLALVGLFFTVSMMSGISTVAGSEAMNAIHARQSGTASALMGTLMFVFGGIAAPLAGLGGETMLKMSFAMTLCYLAALLIGLKKPRPIA
>NZ_CP042545.1|WP_038423879.1|420074_420977_-|N-acetylmuramic-acid-6-phosphate-etherase
MSIDLSKLLTERRNANSANIDILTTEQMLTVINQEDQQVAHAITPYLPQIAQVVDKVAAALQAGGRLIYIGAGTSGRLGILDASECPPTFGTRPEQVVGIIAGGHKAILSAVENVEDNKAQGVMDLQNLNFSSRDVLVGLAASGRTPYVIGAMEYAHSQNAFVAIVSCNPHGEMAQLADVAITPVVGPEVVTGSTRLKAGTAQKLVLNMISTGAMIRIGKVYSNLMVDVEATNAKLIERQVSIVMEATECDRATAQSALEACDRHCKTAIVMVLADLSAADAQALLAKNNGYIRKALSHS
>NZ_CP042545.1|WP_038423880.1|418616_420050_-|PTS-N-acetylmuramic-acid-transporter-subunit-IIBC
MAKINKEMIARILQHVGGAGNVAQAGNCMTRLRLTLRDESRADSAAIRQIDGVMGVIVSDEQFQVVLGPGKAQSAAEMMNALLEEAPADAPSLADVAAKKKQALKSKQTSGIQKFLAKFATIFTPLIPGFIAVGLLLGFATLAEQIFVLENAHPNATLIALIGYMKVFSKGMFTFLSILIGYNAQKAFGGSGVNGAIIAALFVLGYNPEATSGFYSGISTFFGHGIDPRGNIIGVLIAAIIGAWVERQVRRIMPANLDMILTSAVTLLIMGAITFTVIMPIGGWLFTGMSWLFLHLNGNPFGSAVLAGLFLLAVMFGVHQGFVPVYFALVDAQGFNSLFPILAMAGAGQVGAALALFWRAKHGSLLRTQIKGAIIPGFLGIGEPLIYGVTLPRMKPFITACLGGACGGFFLGLIAWLGLPVGLNTVFGPSGLVALPLMTSGSGIYAGMAVYAAGLAVSYLCGFALTWLFGSKNVDLS
>NZ_CP042545.1|WP_014227298.1|418274_418511_-|antitoxin
MPAAKRNKQNVSVTLDPGLVKQAREVGINLSLTLTNALKSEIHSLEIARWQKENAQAIDYLNNLTEENGLLSDEYRTF
>NZ_CP042545.1|WP_014227299.1|417963_418272_-|cytotoxin
MQYYVYKNTGRIAAYPYLLDVQSDIIGKRNTRVVIPLFPLKNYKGPRADRLTPLVTVEGEEYVVMTHELASIPHRVLGEEVCNLNHQREVVKASMDFLFDGI
>NZ_CP042545.1|WP_085955001.1|416910_417792_-|EamA-family-transporter
MLNVLIAAVLWGSSGVCAQYIMQQSQMSSPFLTMTRLLFAGLILLMLSFFHGDKIFRVLQNRKDAVSLLIFSLFGALTVQYTFLMTIEQSNAATATVLQFLSPTIIVAWFAIARKTRPSPLVLAAIATSLAGTFLLVTHGNPTTLSISPTALFWGIASAFAAAFYTTYPSTLIARYGTLPIVGWSMLLGGAMLLPFYAGQGNHFVVTGGLLLAFFYLVVIGTSLTFSLYLNGAQKIGGAKAGILSCAEPLSSALLSLLLLGITFTLPDWLGTLLILSSVVLIAMDSRRRVKTA
>NZ_CP042545.1|WP_014227291.1|429025_429673_-|TetR/AcrR-family-transcriptional-regulator
MSAQKDNEAPRRPGRPRGQKSGSANREQLMDIALALFARHGIARISLNAIAKEAGVTPAMLHYYFSSREALVEKLVEERFMPLRSEIGQIFVAHGDDPVTAFTLLIETLAAMAEKNAWFAPLWMQEIIGEMPVLRQHMHARFGDEKYHKMLETVRRWQREGKLNPALSPELLFTTLISLVLVPFSRTHTDPRLQSVDRKMIVSHALALTGRGIGG
>NZ_CP042545.1|WP_032695129.1|429753_431250_+|MFS-transporter
MTSEIASQPAVPSIRLLFSALLLVMLLSALDQTIVSTALPTIVGELGGLDKLSWVVTAYILSSTIAVPLYGKFGDLFGRKIVLQVAIVLFLAGSALCGLAQNMTQLVLMRGLQGLGGGGLMVISMAAVADVIPPANRGRYQGLFGGVFGLATVIGPLIGGFLVQHASWRWIFYINLPLGLFALLVIGAVFHSSNKRSQHQIDWLGAIYLSMALLCIILFTSEGGSVRAWSDPQLWCILAFGLVGIVGFIHEERLASEPIIPLSLFRNRSFLLCSLIGFVIGMALFGSVTFLPLYLQVVKEATPTEAGLQLIPLMGGLLLTSIVSGRIISRTGKYRVFPIIGTLLGVVGMVLLTRITIHSAMWQLYLFTGVLGAGLGLVMQVLVLAVQNAMPAQMYGVATSGVTLFRSIGGSIGVALFGAVFTHVLQSNLQRLLPEGAQLPRALNPAAVQNLPAEIRLDYLDAFGSAIHAAFLMAACIMAVAFALSWLLKEAPLKTGTR
>NZ_CP042545.1|WP_038423877.1|431246_432161_-|LysR-family-transcriptional-regulator
MDRLSAMALLVKVAELGSMSAAARALNIPLTTVSRQIGELENTLGVRLMIRTTRKLTLTDAGVDYVAAARRILEEVENAERQAAGEYQEPKGELVLSAPTMFGRQQVLPVVTDFLARYPQIRVRLLLSDRNADLVGDHIDLAVRIGTLPDSGMVATRLGEMRIVTCAHPALLEKHGIPERPRELAALPIIRIESPMPYRGWRFNAEEAEDRLVALQPVLSLTTPESAADAARLGAGVARLLHYQAIDGLARGELKLLLQAMEPEPAPVHLLYTSRDLAPLKLRKFIDFAAPALRRALRRIAAAV
>NZ_CP042545.1|WP_038423876.1|432263_432884_+|phosphatase
MPAEFLDIAMTPDVMDVQHEMGSDELWQSPHRQRRGERFGASEEAMIVTRDSFYLATLSQTGWPYIQHRGGPVGFLHLLDETTLGMADFSGNRQYITTGNLRGSDRACLFLMDYPRRARLKIYATVEVVAVDADPQLLAQVAPENYRARIERIYRFHLQAFDWNCPQHIIPRYTARQVAEYSQTLQQRIDELERENQRLQQLIYPK
>NZ_CP042545.1|WP_014227287.1|433014_433485_+|nuclear-transport-factor-2-family-protein
MTEQRPPLPPFTRESAAQKVRAAEDGWNSRDAAKVALAYTVESEWRNRSEFVHGRTQIIDFLQRKWRKEQEYRLIKELWAWSDNRIAVRFAYEWHDDSGNWFRSYGNENWEFDEHGLMQTRYACINDLPITESERLFHWPQGRRPDDHPGLSELGL
>NZ_CP042545.1|WP_014227286.1|433740_434550_+|lipoprotein-NlpA
MKLRLRTAAAVMLAGLLLAGCDQKGSDAKHIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYRLVAVGNTFVFPMAGYSRKIKSVAELKDGATIAIPNDPTNLGRALLLLQQEKLITLKAGTGLLPTAVDIIDNPHHLKIMELEGAQLPRVIDDPKVDVAIISTTYLQQTGLSPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKAFIHSYQSPEVAKAAETIFNGGAVPGW
>NZ_CP042545.1|WP_014839817.1|434574_435435_+|EamA-family-transporter
MTRQRQADLLLIAATVIAACGWIFSREAIAGMPVFAFLGLRFFFAALLLLPFCRGLRVERQQWPRMIISGLWFALNLCLWIYSVSTTPSLGEGAFIMSLSMLFVPLTAWVMMKARPARAYWECLPIAVVGLGLLSLHMPIAFHPSQGWFLLTALVQSIWFCYTSKSAREVPLIPLTTVQLGITGIVGLGISAAVESWTQPFTLPTFGWLLASIVIATSLRFGLQMKGQKYAAVASAAIIMVLEPLLTVIAAALWYGEQLPLQKIIGGLLILVAQLWFRWRMLKPLR
>NZ_CP042545.1|WP_038423875.1|435426_435981_-|NUDIX-hydrolase
MKKKLTSADMHDVEVLADTPWFSMRKVGIDMAPGDRRDFFSIHYPRPAVGIVAMQDDKVLLIRHYRYLIDRVVWAIPSGGVDEGEDPREAALRELREETGWQAQRADEIIRYNPSYGSSDQLFITWLAHNLTWVGMDEDQDEVMETGWFTLEEIGQLIARGEMPDGLSLVPLLHLMAQRRTGLA
>NZ_CP042545.1|WP_032695125.1|436150_436930_+|MBL-fold-metallo-hydrolase
MKITHVRNATQLIEYAGKKFLIDPMLSAKGAWAGFAGTARSELRNPLVELPFSIETIVDVDAVIVTHTHQDHWDEAAIAAIPKTLPVYVQHDADAQLLRGQGFRDIRLLSEDSAFADVALVKTTSGQHGSDRTYAVPAMAERLGEACGVVLRHPQEKTLWLVGDTIWRDEVEADMLRLRPDVVVLNAGYAHVIGFGPIIMGKEDVLKAHFVLPEAKIVASHMEAVNHCLLSRDELRQYVADNQIAEAVSIPQDGESMVF
>NZ_CP042545.1|WP_014227282.1|436944_437898_+|helix-turn-helix-domain-containing-protein
MKLTEVAIVAVDGFSPFHYSVPCMLFGDTVSETKRFNLHICAERPGLLSARDGFALNASGDFSLLAQADIVVVPYWGAVNQRPSQPLLDGLVRARNNGAQIVGLCLGAFVLGYAGLLDDRRAATHWEFEQDFQRQFPQVRLDINALYVDDEGIITSAGTAAALDCCLYLIRQRFGSLVANQIARRMIVPPHREGGQAQFIAQPVPKNTRDARINGLLEYLQQHIREPHNLDSLAQVAAMSRRTLTRHFAKATGMGIADWLAAERLRRSQILLEAGDLPVGQVAEEVGYRSAVTWRQQFKARFGVSPAEWRRTFRRGA

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Crispr_ID: NZ_CP042545_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042545_2

4230235-4230442

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TAAGCTGCCTGTACGGCAGTGAA	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP042545_2

>merge|NZ_CP042545|2|4230235-4230442|CRT,CRISPRCasFinder,PILER-CR
ACCATAAGCTGCCTGTACGGCAGTGAAGTAAAGCCATAACCTGTCGCATTGGCTGTCCAGTTTCTAAGCTGCCTGCACGGCAGTGAACGTTTGAACCTGATAAGTACCTTTCGGTCACCTTTTCTAAGCTGCCTGTACGGCAGTGAACCTGCCGGTAAAGCACAGTAGGGAGTTTTTTACTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP042545|2|1|4230235-4230442|CRT
ACCATAAGCTGCCTGTACGGCAGTGAAG	TAAAGCCATAACCTGTCGCATTGGCTGTCCAG
TTTCTAAGCTGCCTGCACGGCAGTGAAC	GTTTGAACCTGATAAGTACCTTTCGGTCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGCCGGTAAAGCACAGTAGGGAGTTTTTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP042545|2|2|4230239-4230441|CRISPRCasFinder
TAAGCTGCCTGTACGGCAGTGAA	GTAAAGCCATAACCTGTCGCATTGGCTGTCCAGTTTC
TAAGCTGCCTGCACGGCAGTGAA	CGTTTGAACCTGATAAGTACCTTTCGGTCACCTTTTC
TAAGCTGCCTGTACGGCAGTGAA	CCTGCCGGTAAAGCACAGTAGGGAGTTTTTTACTTTC
TAAGCTGCCTGTACGGCAGTGAA

>NZ_CP042545|2|1|4230295-4230442|PILER-CR
TTTCTAAGCTGCCTGCACGGCAGTGAAC	GTTTGAACCTGATAAGTACCTTTCGGTCACCT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTGCCGGTAAAGCACAGTAGGGAGTTTTTTAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042545.1\|WP_004849446.1\|4216813_4218157_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP042545.1\|WP_014228619.1\|4235827_4236943_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP042545.1\|WP_014228617.1\|4239159_4239855_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP042545.1\|WP_004849425.1\|4230631_4232914_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP042545.1\|WP_038424264.1\|4242687_4243656_+\|NADH-oxidoreductase	unknown	unknown	gnl\|CDD\|236735
NZ_CP042545.1\|WP_002211347.1\|4229844_4230063_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP042545.1\|WP_009653254.1\|4215429_4216722_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP042545.1\|WP_014837946.1\|4239980_4240880_+\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP042545.1\|WP_038424266.1\|4227100_4228822_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP042545.1\|WP_014228618.1\|4237118_4238777_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP042545.1\|WP_004100628.1\|4232944_4233262_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|225038
NZ_CP042545.1\|WP_004849433.1\|4224250_4225219_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP042545.1\|WP_002439523.1\|4223224_4223719_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP042545.1\|WP_042944808.1\|4218898_4223089_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP042545.1\|WP_025108294.1\|4233884_4235831_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP042545.1\|WP_004130911.1\|4218165_4218777_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP042545.1\|WP_014837945.1\|4241024_4242677_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP042545.1\|WP_014228628.1\|4225333_4227100_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP042545.1\|WP_038424265.1\|4228860_4229565_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP042545.1\|WP_004100627.1\|4233586_4233817_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960

Protein	Function_ID	Function_description	E-value
NZ_CP042545.1\|WP_004849446.1\|4216813_4218157_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP042545.1\|WP_014228619.1\|4235827_4236943_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP042545.1\|WP_014228617.1\|4239159_4239855_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	8.1442e-145
NZ_CP042545.1\|WP_004849425.1\|4230631_4232914_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP042545.1\|WP_038424264.1\|4242687_4243656_+\|NADH-oxidoreductase	gnl\|CDD\|236735	PRK10684, PRK10684, HCP oxidoreductase, NADH-dependent; Provisional.	0
NZ_CP042545.1\|WP_002211347.1\|4229844_4230063_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.9822e-48
NZ_CP042545.1\|WP_009653254.1\|4215429_4216722_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP042545.1\|WP_014837946.1\|4239980_4240880_+\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	6.86179e-115
NZ_CP042545.1\|WP_038424266.1\|4227100_4228822_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP042545.1\|WP_014228618.1\|4237118_4238777_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP042545.1\|WP_004100628.1\|4232944_4233262_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|225038	COG2127, COG2127, Uncharacterized conserved protein [Function unknown].	2.44335e-47
NZ_CP042545.1\|WP_004849433.1\|4224250_4225219_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP042545.1\|WP_002439523.1\|4223224_4223719_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	6.83837e-117
NZ_CP042545.1\|WP_042944808.1\|4218898_4223089_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP042545.1\|WP_025108294.1\|4233884_4235831_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP042545.1\|WP_004130911.1\|4218165_4218777_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.41927e-116
NZ_CP042545.1\|WP_014837945.1\|4241024_4242677_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP042545.1\|WP_014228628.1\|4225333_4227100_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP042545.1\|WP_038424265.1\|4228860_4229565_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	4.18744e-137
NZ_CP042545.1\|WP_004100627.1\|4233586_4233817_+\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	1.34932e-46

>NZ_CP042545.1|WP_002211347.1|4229844_4230063_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP042545.1|WP_038424265.1|4228860_4229565_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSHHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPDKFHLSRSMKRFHQRSPYRVTLNHAFGQVIEGCADHRDEGTWITPGIVQAYHQLHELGHAHSVEVWQGKKLVGGMYGVAQGALFCGESMFSRAENASKTALLVFSQIFSHDGGKLIDCQVLNKHTASLGAVEIPRRDYLDYLSVLRTYRLSERFWVPRVLFAGEA
>NZ_CP042545.1|WP_038424266.1|4227100_4228822_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALWPYLALYKRHKWLLLLGIVLAIVTLLASIGLLTLSGWFLSASAVVGVAGIYSFNYMLPAAGVRGAAIIRTAGRYFERLVSHDATFRVLQHLRVFTFSKLLPLSPAGLARFRQGELLNRVVADVDTLDHLYLRVISPLVGALVVILVVTVGLSVLDATLALTLGGIMLLTLLVMPPLFYRAGKPAGESITRLRGQYRQHLTSWLQGQAELMLFNASDRYRQQMEKTEARWLDAQRRQAELTALSQALMLLIGGIAVIAMLWLASAGVGGDTQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAKRITQITEQEPEVTFTHGEGQTLENVSLRLHQVTFSYPQQPSPALEKVSLQIEAGEHIAILGRTGCGKSTLLQLLTRAWDPAEGEILLNNQPLGQFNEATLRRAMSVVPQRVHLFSATLRDNLLLASPGASDARLAQTLERVGLAKLLEDSGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLMLLDEPTEGLDATTESQILDLLAEVMREKTVLMVTHRLRGLARFNQIIVMDNGKIIEQGSHAELLAEQGRYYQFKQRL
>NZ_CP042545.1|WP_014228628.1|4225333_4227100_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKTRQQELTRWLKDQSIISRRWLMISRVLGVVSGLLIVAQAWFLARILHRMIMENIPATALLLPFTLLVLVFVLRAWVVWLRERVGFQAGQHIRLEIRRQVLDRLQQAGPAWIQGKPAGSWATLILEQIDDMHDYYARYLPQMTLAASVPLLIVITIFPINWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFHRGEAETDNIREASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELNFGHYGAGVTLMSGFLALILAPEFFQPLRDLGTFYHAKAQAIGAADSLKTFMEAPLAQAERGEKALKDDETVSLEARDLLIKSPEGKVLAGPLNFSLRAGERVVLVGQSGSGKSSLLNTLTGFLPYDGSLKVNGVELKSLDADRWRRLLSWVGQNPQLPAATLRENVLLSCPEATEAQLQLALDKAWVSEFVSLLPQGINTPVGDQAGRLSVGQAQRVAVARALLVPCRLLLLDEPAASLDAHSEQRVMQALTNASTQQTTLMVTHQLEGLANWDAIWVMQDGRIVEQGSYSQLAAAGGPFATLLAHRQEEI
>NZ_CP042545.1|WP_004849433.1|4224250_4225219_+|thioredoxin-disulfide-reductase
MGTAKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINSVDLQNRPFRLVGDSGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVESGNIVLHTHRTLEEVTGDQMGVSGLRLRDTQNADNVESLEVAGLFVAIGHSPNTAIFAGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADACK
>NZ_CP042545.1|WP_002439523.1|4223224_4223719_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNSAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP042545.1|WP_042944808.1|4218898_4223089_-|DNA-translocase-FtsK
MSQEYTEDKEVKFTKLSSGRRLLEALLILCSLFAIWLMAALLSFNPSDPSWSQTAWHEPIHNIGGTPGAWLADTLFFIFGVMAYTIPVIIIGGCWFAWRHQENDEYIDYFAVSLRLIGALALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCIWAAGLTLFTGWSWVSIAEKLGGAILSILTFASNRTRRDDTWVDEGEYEDDEEEYEDDEPAKQQGSRRARILRSALARRQRLAEKFSNPMGRKTDAALFSGKRMDDAEDEVQYSAGGAPVAADDVLFSGSSAARPANADDVLFSGVSAARPGDFDPYDPLLNGHSIADPVALAAQDTAAPQAWSEPLPGYEAQPVYHPEQAPVQQPAYQPEPAYQPQHAYQPEQAPVQQPAYQPAPAYQPQHAYQPEQAPVQQPAYQPAPAYQPQHAYQPEQAPVQQPAYQPEPAYPPQHAYQPEQAPVQQPAYQPEPAYQPQHAYQPEQAPVQQPAYQPEPAYQPQHAYQPEQAPVQQPAYQPEPAYQPQHAYQPEQAPVQQPEPYAASVEPEPPQEEVKPQRPPMYYFEEVEEKRAREREQLAAWYQPIPEPVSPVATKPIAPPPAPAADVAAVSALAAGVHQATGAASASAAAASVASTASSAAPLFSPASGGPRAQVKEGIGPKLPRPNRVRVPTRRELASYGIKLPSQRLAEERARQAEHQHYDDDALTDEEVAELEQGELARQFAAAQNQRYGDSYAAEEDDVDEDSAAEAELARQFAASQQQRYASEQPPGSHPSSAADYEFSPMKTLVDDTPSEPVFTPLPEVQQPAPQYQQPAQHSQPVQQPMPHQQMPQPPQHAQQQAYQPAQQQPVHHQPMPQQAPGSYPQQQAPQQPIPQPQESLIHPLLMRNGDSRPLQKPTTLLPSLDLLTPPPAEVEPIDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTAAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVTADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVKFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWSVNEMERRYKLMSALGVRNLAGYNEKIAEAARMGRPIPDPYWKPGDSMDATHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQGGAESLLGMGDMLYSAPNSTIPVRVHGAFVRDEEVHAVVQDWKARGRPQYVDGITSDSESEGGGGGYEGGEELDPLFDQAVNFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFE
>NZ_CP042545.1|WP_004130911.1|4218165_4218777_-|outer-membrane-lipoprotein-chaperone-LolA
MKKLAITCALLSSFVVSQVWADAASDLKSRLDKVSSFHSSFTQKVTDGSGNAVQDGQGDLWVKRPNLFNWHMTQPDESVLVSDGKTLWFYNPFVEQATATWLKDATSNTPFMLIARNQASDWQNYNIKQNGDDFVLTPKNGSGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDASKFTFTPPQGVTVDDQRK
>NZ_CP042545.1|WP_004849446.1|4216813_4218157_-|replication-associated-recombination-protein-A
MSNLSLDFSDNAFQPLAARMRPENLAQYIGQQHLLAPGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLTSDDIEQVLNQAMSDKTRGYGGQNIVLPDETRKAIADLVNGDARRALNTLEMMADMAEADASGNRVLKVELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAAMADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYAAGEQYFPQEMAQTRYYKPTNRGLEGKIGEKLAWLTEQDQNSPIKRYR
>NZ_CP042545.1|WP_009653254.1|4215429_4216722_-|serine--tRNA-ligase
MLDPNLLRTEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEQLDAAKTELDALLAEIRDIALAIPNIPHDDVPAGRDENDNVEVSRWGTPREFDFDVRDHVTLGEMHGGLDFAAAVKLTGSRFVVMKGQLARLHRALAQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADSSNYALIPTAEVPLTNLVRDEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKVALCTGDMGFSACKTYDLEVWVPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEIPEVLRPYMRGLEFIG
>NZ_CP042545.1|WP_004849425.1|4230631_4232914_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPATEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPSQSSDNSGSQPGSSEEQAGGEDRMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSRSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLAKSLGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNLLLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSPDAMDEIKKIFTPEFRNRLDNIIWFDHLSTTVIHQVVDKFIVELQVQLDQKGVSLEVSQEARDWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVELDKEKNALTYDFQSAQKHKPEAAH
>NZ_CP042545.1|WP_004100628.1|4232944_4233262_-|ATP-dependent-Clp-protease-adapter-ClpS
MSKRDWLDFDQLIEDEVKDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLTVHYQGKAICGVFTAEVAETKVSMVNQYARENEHPLLCTLEKA
>NZ_CP042545.1|WP_004100627.1|4233586_4233817_+|cold-shock-like-protein-CspD
MEMGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQAVRFDVHQGPKGNHASVIVPVEAEETETAA
>NZ_CP042545.1|WP_025108294.1|4233884_4235831_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTALLELRDIRRSYPSGDGNVEVLKGITLNIAAGEMVAIVGASGSGKSTLMNILGCLDKPTGGTYRVAGTDVARLNGDELARLRREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGAERKARLARAHELLVRLGLGDRAEYQPSQLSGGQQQRVSIARALMNGGEVILADEPTGALDSRSGEEVMGILHQLKAQGHTVIIVTHDPQVAAQAERVIEIHDGEIVRNPPALSPAQGGVLRQRTAAEPSAWRQFSSGFREALIMAWRAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAIGTNTIDVYPGKDFGDDDPRYQQSLKYDDLLAIQKQPWVSSATPAVSKSLRLRADNIDVAASAEGVGAQYFNVYGMTFSEGNTFNELQLNSRAQVVVLDSNARRQLFPHKARVVGEVILVGNMPATVIGVADEKQSMFGSSKILRVWLPYTTMAGRVMGQSWLNSITVRVNEGYDSAVAEQQLLRLLELRHGKKDVFTWNMDSILKTAERTTHTLQLFLTLVAVIALVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGVTLSLLIAFVLQLFLPGWEIGFSPLALLTAFLCSTLTGVLFGWLPARNAARLDPVDALARE
>NZ_CP042545.1|WP_014228619.1|4235827_4236943_-|macrolide-transporter-subunit-MacA
MKLNGKRRKVWWLLAIVVLALAVWGWRILNAPLPQYQTLVVRKGDLQQSVLATGKLDALKKVDVGAQVSGQLKTLRVEIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQLNQARAERKLSAATLARQQQLAQRQLVSRQDLDTAATDLAVKEAQIGTIEAQVKRNQATLDTAKTNLDYTKILAPMSGEVTQITTLQGQTVIAAQQAPNILTLADLSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGTLKDILPTPEKVNDAIFYYARFEVPNPQGILRLEMTAQVHIQLSEVKNVITIPLSALGEAIGDNRYHVRLLRTGEVKEREIVIGARNDTDVAVVKGLDEGDEVIIGEGAAGAAK
>NZ_CP042545.1|WP_014228618.1|4237118_4238777_-|ATP-dependent-endonuclease
MHLERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPEFDLYHFVREDFWFPPGDIQGREHHLHIILTFRENEPGRHRVRRYRPLSSCWVPCDDGYQRVFYRLEGELADDDSVMTLRSFIDGEGKALELDDIDELARHLVRLMPVLRLRDARFMRRIHNGTVPHSPQIEITARQLDFLSRELVHHPQNLTDGQIRQGLSAMVQLLEHYFAEQSSAQSRHRLMRRHSHDEQRSWRYLDIINRMIDKPGGRSHRVILLGLFSTLLQAKGTVRLDRDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRVTTTNSGELLSLTPVEHVCRLVRESSRVSAWRLGPGGMNAEDSRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQCGHHFDAEGVKVIEFAQSGLKPLIKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNDDKMLERDHLTALPAMDMEHFMYRQGFDDVYHRVAQLPMNIPMNMRRVITKAIHRSSKPDLAIEVAMEAGRRGVDAIPALLKKMFSRVLWLARGRAD
>NZ_CP042545.1|WP_014228617.1|4239159_4239855_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAAFPELGIGFAGVALAFGLTVLTMAYAVGHISGGHFNPAVTLGLWAGGRFPARDVIGYIIAQVVGGIIAAAILYVVASGKAGFDAAASGFASNGYGEHSPGGFSMLSAIVIEIVLTCGFLLVIHGATDKNAPAGFAPVAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALQQLWLFWVMPIIGGILGGVLYRTLLEKRS
>NZ_CP042545.1|WP_014837946.1|4239980_4240880_+|lysine-exporter-LysO-family-protein
MFSGLLIILLPLVIGYLIPLHRPSALKLIARLLSWIVYVILFFMGISLAFLDNLASNLLAILHYAAVSVVIILLCNIAALMWLEQKMPWQNHHRQEKLPSRLAMALESLQLCGVVFIGFMIGLSGISFLQHATEASEYTLIFLLFLIGIQLRNNGMTLRQIVLNRRGMIVAVVVMVSSLLGGIINAFILDLPLKTGLAMASGFGWYSLSGILLTESYGPVIGSAAFFNDLARELLAIMLIPGLVRRSRSTALGLCGATSMDFTLPVLQRSGGVEIVPAAIVHGFILSLLVPILMAFFSA
>NZ_CP042545.1|WP_014837945.1|4241024_4242677_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIASLQGLSAWALKAREYGIIDHDIDSFAPRAFFSTLTNVNFDSPRIVGYAREAITLREALKAQCLNIDAQATVNNPMADLQLASDDLGDLQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETTKYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLIGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVNHLEGEDFAPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFFTPDLLAVLNEKFGLRSVTTVEEDMKQLLSA
>NZ_CP042545.1|WP_038424264.1|4242687_4243656_+|NADH-oxidoreductase
MTMPTHQCPWRMQVHHIHQETPDVWTISLLCHDYYPYRAGQYALVSVRHSAETLRAYTISSTPGVSEYITLTIRRIDDGAGSQWLTRDVKRGDYIWLSDAMGEFTCEDKAEDKFLMLAAGCGVTPIMSMRRWLAKYRPQADVQVIFNVRSPQDVIFADEWREYPVTLVAENNATHGFVSGRLTIDLLKSVPDLTSRTVMTCGPAPYMDWVEQEVKALGATRFFKEQFFTLVAEAATSGLKFTKLQPAKAFYAPVGTTLLEALESNKVPVTVACRAGVCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQSDLVLA

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Crispr_ID: NZ_CP042545_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042545_3

4581622-4581731

Orphan

Consensus_repeat	Method
ACCCGTAGCCCGGGTAAGCGCAGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042545_3

>merge|NZ_CP042545|3|4581622-4581731|CRISPRCasFinder
ACCCGTAGCCCGGGTAAGCGCAGCGCCACCGGGGAAGCACACCGCAGACGACGGTGAGTTGGCCGGAACCACAGACGGCGCGTTACCCGTAGCCCGGGTAAGCGCAGCGC

>NZ_CP042545|3|3|4581622-4581731|CRISPRCasFinder
ACCCGTAGCCCGGGTAAGCGCAGCGC	CACCGGGGAAGCACACCGCAGACGACGGTGAGTTGGCCGGAACCACAGACGGCGCGTT
ACCCGTAGCCCGGGTAAGCGCAGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042545.1\|WP_038424207.1\|4583786_4585394_-\|(2,3-dihydroxybenzoyl)adenylate-synthase	unknown	unknown	gnl\|CDD\|236803
NZ_CP042545.1\|WP_014228368.1\|4573068_4574133_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP042545.1\|WP_103449053.1\|4590190_4590427_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042545.1\|WP_032718732.1\|4578484_4578889_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP042545.1\|WP_004848703.1\|4571830_4573072_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227601
NZ_CP042545.1\|WP_038424209.1\|4581752_4582166_-\|proofreading-thioesterase-EntH	unknown	unknown	gnl\|CDD\|182337
NZ_CP042545.1\|WP_032694346.1\|4574277_4575276_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP042545.1\|WP_014228361.1\|4582921_4583773_-\|isochorismatase	unknown	unknown	gnl\|CDD\|224452
NZ_CP042545.1\|WP_014228363.1\|4579138_4581244_-\|carbon-starvation-protein-CstA	unknown	unknown	gnl\|CDD\|184976
NZ_CP042545.1\|WP_038424206.1\|4586766_4587726_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP042545.1\|WP_004130340.1\|4578885_4579083_-\|YbdD/YjiX-family-protein	unknown	unknown	gnl\|CDD\|225434
NZ_CP042545.1\|WP_014228365.1\|4576935_4578024_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570
NZ_CP042545.1\|WP_038424208.1\|4582166_4582922_-\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	unknown	unknown	gnl\|CDD\|236190
NZ_CP042545.1\|WP_014228354.1\|4590796_4592038_-\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP042545.1\|WP_032694351.1\|4585403_4586579_-\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP042545.1\|WP_014228366.1\|4575272_4576775_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP042545.1\|WP_032694345.1\|4570503_4571703_+\|S-methyl-5-thioribose-kinase	unknown	unknown	gnl\|CDD\|236561
NZ_CP042545.1\|WP_038424204.1\|4592150_4593158_+\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP042545.1\|WP_071889099.1\|4578210_4578504_+\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|224937
NZ_CP042545.1\|WP_038423277.1\|4587955_4590073_+\|chitinase	unknown	unknown	gnl\|CDD\|225862

Protein	Function_ID	Function_description	E-value
NZ_CP042545.1\|WP_038424207.1\|4583786_4585394_-\|(2,3-dihydroxybenzoyl)adenylate-synthase	gnl\|CDD\|236803	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase.	0
NZ_CP042545.1\|WP_014228368.1\|4573068_4574133_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	3.42076e-123
NZ_CP042545.1\|WP_014228354.1\|4590796_4592038_-\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP042545.1\|WP_032718732.1\|4578484_4578889_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.09993e-10
NZ_CP042545.1\|WP_004848703.1\|4571830_4573072_-\|hypothetical-protein	gnl\|CDD\|227601	COG5276, COG5276, Uncharacterized conserved protein [Function unknown].	5.4488e-149
NZ_CP042545.1\|WP_038424209.1\|4581752_4582166_-\|proofreading-thioesterase-EntH	gnl\|CDD\|182337	PRK10254, PRK10254, proofreading thioesterase EntH.	2.8754e-87
NZ_CP042545.1\|WP_032694346.1\|4574277_4575276_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.14379e-68
NZ_CP042545.1\|WP_014228361.1\|4582921_4583773_-\|isochorismatase	gnl\|CDD\|224452	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism].	1.91369e-131
NZ_CP042545.1\|WP_014228363.1\|4579138_4581244_-\|carbon-starvation-protein-CstA	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
NZ_CP042545.1\|WP_038424206.1\|4586766_4587726_+\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP042545.1\|WP_004130340.1\|4578885_4579083_-\|YbdD/YjiX-family-protein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	7.34639e-36
NZ_CP042545.1\|WP_014228365.1\|4576935_4578024_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0
NZ_CP042545.1\|WP_038424208.1\|4582166_4582922_-\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	gnl\|CDD\|236190	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated.	2.22393e-168
NZ_CP042545.1\|WP_032694351.1\|4585403_4586579_-\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP042545.1\|WP_014228366.1\|4575272_4576775_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP042545.1\|WP_032694345.1\|4570503_4571703_+\|S-methyl-5-thioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	0
NZ_CP042545.1\|WP_038424204.1\|4592150_4593158_+\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	2.10015e-179
NZ_CP042545.1\|WP_071889099.1\|4578210_4578504_+\|plasmid-stabilization-protein	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	1.17291e-08
NZ_CP042545.1\|WP_038423277.1\|4587955_4590073_+\|chitinase	gnl\|CDD\|225862	COG3325, ChiA, Chitinase [Carbohydrate transport and metabolism].	9.41372e-126

>NZ_CP042545.1|WP_014228363.1|4579138_4581244_-|carbon-starvation-protein-CstA
MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVAESPTWAPWFDYTGVQLTWILVGYGFIAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFIDGTGPVWSGSLFPFLFITIACGAVSGFHALIASGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGVTDVVASAAQVVSSWGFTVTPDTLNQIATEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVISPGLKQTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSTDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKEDKPTAKETPYQAMPADADSLVTQAKRAH
>NZ_CP042545.1|WP_004130340.1|4578885_4579083_-|YbdD/YjiX-family-protein
MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHIRATHPEQTPMTYEEFFRERQDARYGGKGGAKCC
>NZ_CP042545.1|WP_032718732.1|4578484_4578889_+|helix-turn-helix-domain-containing-protein
MAVQIIKDDEGKAQYAVIPYDEYFQMCLQLAELDDETEADLEDIAVEHDIYDNVMLPGDVCDIMDKEKVSLQAAWRILRGLSQQEVANKLGISQSAVSQLEAIDSRPQKRTREKLAAIYGCTQEQISLYLPKEG
>NZ_CP042545.1|WP_071889099.1|4578210_4578504_+|plasmid-stabilization-protein
MLIWSKVAKKELANTDYRYQQRIKSRLADLGDRTAPRPDVRKLSKPENHYRLRVGDYRVIFTRQGLTLSDLFIVSVKRRTSTTYLHEENMPYGCSDN
>NZ_CP042545.1|WP_014228365.1|4576935_4578024_+|oxidoreductase
MSHSDIRVVPGPANYYSHPGSLARLQDFYSEEQLSRAVWVYGERAIAGAQAFLPAAFNAPGAKKILFKGHCSESDVSELARASGDDRSVVIGVGGGALLDTAKALARRLGLPVVAIPTIAATCAAWTPLSVWYNDAGQALQFEIFDDANFLVLVEPHIILNAPAEYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINGALAIRDVLLESSETALADQQRGELTQAFRDVVDAVIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTEKYLHGTKVAYGILVQSALLGQDDVLAQLVQAYRRFNLPTTLAALEVDINNREQLDKVIAHTLRPVESIHFLPVELNAETLRAAFEKVERFAG
>NZ_CP042545.1|WP_014228366.1|4575272_4576775_-|sugar-ABC-transporter-ATP-binding-protein
MTGNRLEMQNISLAFSGFRALSNVAFTLTGGSVHALTGANGAGKSTLMAVLCGTHAHYEGEVVINNQSVSIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGIAFRWGRLRQLAREALAQLDVSLDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQNESERLFAVVRRLQRQGIGIVFISHRIHELKAVCDTLTVLRDGRLIESGPMADLSGEQIVEKMLGHELSDIFPPKRPPHSDEVLLQVEGLHDEGLLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRLTRGELNSQPWRPRDPADSVARGLALVPEERRKEGIFIEEPVAMNLAVSADSSFSRWSLFGHRQAWRWAEEVIARVGIRTSGPAQTLRRLSGGNQQKVAIGKWLRGNANVLIFDEPTKGVDVKAKTDLFNAIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEIPGAEAREENILYYSTGGAAA
>NZ_CP042545.1|WP_032694346.1|4574277_4575276_-|ABC-transporter-permease
MSKALAVNATVSGRQRFFDFLYKWGMLLTVVLLIAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGFGTTEAILITLALCTLVGLFNAFLIVILRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGDMAEGVIPAAFGSLGQVPTIVIIMLVVTVIAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT
>NZ_CP042545.1|WP_014228368.1|4573068_4574133_-|sugar-ABC-transporter-substrate-binding-protein
MKKITFSLIALGLFNAAAAFAETPTPLPAAIAEHSGPIRIAVIRNLGSDDNTTQFVSGAIQEGKKLGFKISTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYATALVKKAVDAGIKVSVFDTAVNGQIPGVTVTQQDDASLTELSFGQLVKDFNGKANIVKLWVAGFPPMERRQAAYQTLLKQNPGIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYKALKENGRTEIKLYSIDISNQDLQLMRESGSPWKVSVAVDPKLIGATNVRLIANKIAGEPTPATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK
>NZ_CP042545.1|WP_004848703.1|4571830_4573072_-|hypothetical-protein
MSVLPTPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSVVDVRDPKHPQTVNYIAAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRSVGETVSDVRDRGWSAGLRIFDISTPDKPREIAFLSLNGIGIHRIWYVGGRWAYVSALIDGFSDYIFLTIDLADPRKPEVAGRWWLPGMNQAAGETAQWPEGKRYALHHAIIAGDTAYGSWRDGGLTLLDVQDRTQPKLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQQDGEKLIWLFDIRDPTNPVSIATFPQPDEADYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPVETGALVPAAPAKMMDTRPGRPRVIQSCDVFVDAQGIIYSTDYNGGLSVIEYLG
>NZ_CP042545.1|WP_032694345.1|4570503_4571703_+|S-methyl-5-thioribose-kinase
MSQYHTFTASDAVAYAQQFGGIDNPSELVSAQEVGDGNLNLVFKIFDIRGVSRIIVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHCPQHTVRIVHFDPELAVMVMEDLSDHRIWRGELINNVYYPQAASQLGEYLAQTLFHTSEFYLHPHEKKAQVAQFINPEMCEITEDLFFNDPYQVHERNSYPAALEADVAALRDDAQLKLAVAALKHRFFSHAEALLHGDIHSGSIFVAEGSFKAIDAEFGFFGPIGFDIGTAIGNLLLNYCGLPGHLGIRDAAAAREQRLSDIQQFWTTFAERFQALAAERSRDAALAWPGYASAFLKKVWADAVGFCGTELIRRSVGLSHVADIDTIQDEAMRHECLRHAITLGKALIVIADRIDSVDELIARIRQYG
>NZ_CP042545.1|WP_038424209.1|4581752_4582166_-|proofreading-thioesterase-EntH
MAWKRQLTLDELNATSVNTMVAHLGIVYTRLEEGVLEAEMPVDVRTHQPFGLLHGGASAALAETLGSMAGWLMTEEGQCVVGTELNATHHRAVSSGKVRGECRALHLGRQGQSWEIAVFDERGRRCCTCRLGTAVLG
>NZ_CP042545.1|WP_038424208.1|4582166_4582922_-|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase
MNGLDFHGRTVWITGAGKGIGYATALAFVEAGAQVTGFDLAFDGESYPFTTETLDVADAQQVAQTCGRLLAGIARLDVLVNAAGILRMGATDVLSQEDWQQTFAVNVGGAFNLFQQTMGQFRRQKGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALTVGLELAGSGVRCNLVSPGSTDTDMQRTLWVSDDAEQQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDHASHITLQDIVVDGGSTLGA
>NZ_CP042545.1|WP_014228361.1|4582921_4583773_-|isochorismatase
MAIPKLQAYALPEASDIPANKVNWAFEPSRAALLIHDMQEYFLNFWGENSAMMEKVVANIAALREFCKQNHIPVFYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQQVIAALAPDDNDTVLVKWRYSAFHRSPLEEMLKDAGRDQLIITGVYAHIGCMTTATDAFMRDIKPFFVADALADFSREEHLMALNYVAGRSGRVVMTEELLPLPASKAALRALVLPLLDESDEPMDDENLIDYGLDSVRMMALAARWRKVHGDIDFVVLAKNPTIDAWWALLSREVK
>NZ_CP042545.1|WP_038424207.1|4583786_4585394_-|(2,3-dihydroxybenzoyl)adenylate-synthase
MIEFTRWPEEFAARYRQKGYWQDLPLTYLITRHAENDAPAIIDGDKSYSYREFNRLVDNLASSLQRQGLKRGETALVQLGNVAEFYITFFALLRIGVAPVNALFSHQRSELNAYAAQIEPALLIADREHALFADDDFLNAFVAQHASVRVALLLNDGGERSLAAAIARPDDNFVAHPTPADEVAFFQLSGGSTGTPKLIPRTHNDYEYSIRRSNQLCGVSAETRYLNALPAAHNYAMSSPGSLGVFLAGGVVVLAHDPSATLCFPLLEKHQINLTSLVPPAVSLWLQEIHESGSNARLQSLRLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLNDSPERIINTQGCPMCPDDEVWVADAQGNPLPRGEVGRLMTRGPYTFRGYYKSPQHNAEAFDADGFYCSGDLISIDEDGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIHVALVSMEDSLLGEKSCAYLVVKEPLRAVAVRRFLREQGVAEFKLPDRVECVDALPLTPVGKVDKKQLRQWLAERKLG
>NZ_CP042545.1|WP_032694351.1|4585403_4586579_-|isochorismate-synthase-EntC
METSLAEEVREKKMTLPPESFFFMSPYRSFTTAGCFSRFSHPAADGENLDGEFQRKMAAAFAAARAAGIAKPIMVGAIPFDTSEPSELFIPTSWETFSRPEKQHSARYASGQQPMDVVQRREIPEQDTFMAMVARAAALTATPEVDKVVLSRLIDITTRERVDSGALLERLIAQNPASYNFHVPLSDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDVLDREAGHRLLASEKDRHEHELVTQAMKAVLAPRSSELSLPDSPQLITTPTLWHLATQIQGAALANENAMSLACLLHPTPALSGFPHQAAKRLINELEPFDRQLFGGIVGWCDDEGNGEWVVTIRCARLQQRTLRLFAGAGIVPASSPLGEWRETGVKLTTMLNVFGLQ
>NZ_CP042545.1|WP_038424206.1|4586766_4587726_+|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MNFSTFCRRTLLASGLAIFGISSALAADWPRQITDSRGPHTLESQPLRIVSTSVTLTGSLLAIDAPVVASGATTPNNRVADGQGFLRQWSDVAKERKLSRLYIGEPSAEAVAAQMPDLILISATGGDSAMMLYDQLSTIAPTLIINYDDKSWQALLIQLGEITGHEKQAAERIAEFDKKLAALKEKMKLPPQPVTALVYTAAAHSANIWTKESAQGQLLEQLGFTLADLPGGLHASQSQGKRHDIVQLGGENLAAGLNGQSLFLFAGDQKDADAINANPLLAHLPAVEGKRVYPLGTETFRLDYYSAVLVLQRLAALFA
>NZ_CP042545.1|WP_038423277.1|4587955_4590073_+|chitinase
MATSKLIKGDTLTETSNAADGFNPATEVSAYSYTSARVAKPVYNKYKASTTKPKVFGYYTDWSQYDGRLQGDNSKDNRGRGYDLTNVSPTAYDKIIVGFVGVTGFHKVDNLWRDVVAEGADQCGKVKYEPTFLDPWGDFQSYVNVGHTVSGWDVDPKTVTQSNTKGLLGGLRDLQAKAKQQGHDLVLSMSIGGWSMSNGFHETAASDASRKVFAKGVVKLFKQFPMFSEVDIDWEYPNAEGAGNPYGPEDGENYALLIGELRKQLDAAGLSNVKISIASSAVVKTLGYSNVNALLKAGLYGINVMTYDFFGTPWAESVTHHTNLKALEEGGWGVDTVVGHLLSEGFPAERINIGYAAYTRNGRNAELESLSPLKGTYSPGTGTTVGSFESGTTEWYDIIYNYLDLENQKGRNGFNVYTDKVADADYLYNPDSKLFMSLDTPRTVKAKGEYAASLGLGALFTWTIDQDNGVLVNAAREGLGYEMASEVIDMEPFYFEGINVDPADEPAEPEEEEEDTVQPEPSVNHAPKAAIELMVVGGSRVRLSGEKSSDEDNDELTFSWGVPAAINVADKTAAVIEFDVPKVAEDTEYTFTLFVRDTWGEPSTQQRFVLSVVAATQTDDTEDEPADDQDRTDDTPQPADDDVVPSDETTPYPLWNASTVYGSNWGSFEIVSWKGHNYQVKWWSQGNQPDLNCGQFQVWSDLGAY
>NZ_CP042545.1|WP_103449053.1|4590190_4590427_+|hypothetical-protein
MLRDECIGAASSRVALRLPGLRVHRRLWASSPGQAFTPQPGMYGDKYIDAASSRVALRLPGLRVLPGNCRSVAWVAPG
>NZ_CP042545.1|WP_014228354.1|4590796_4592038_-|enterobactin-transporter-EntS
MNRQSWLLNLSLLKTHPAFRAVFIARFISILSLGLLGVAIPVQIQLMTHSTWQVGLSVTLTGGSMFVGLMIGGVLADRYERKRLILLARGTCGIGFVGLCLNAMLPEPSLIAIYLLGIWDGLFASIGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMIGGLLLATGGVAWNYGLAAAGTFITTLTLLRLPRLAPPPQPREHPLKSLYAGLKFLFNSPLIGGIALLGGLLTMASAVRVLYPALAGSWQMSTSQIGLLYAAIPLGAAFGALTSGQLAQTARPGVLMLATTVGSFVAIALFSLMPVWALGALCLALFGWLSAISSLLQYTLIQTQTPENMLGRINGLWTAQNVTGDAIGAALLGGLGAILTPAASASASGWALVIVGVVLVGLLRELRRFQRPETASEN
>NZ_CP042545.1|WP_038424204.1|4592150_4593158_+|Fe(3+)-siderophore-ABC-transporter-permease
MSSSTTAARAFAVPGLLIVLIIAVALSLLVGAKPLPFSVVIDAFTGTCQSADCTIVLDARLPRTLAGLLAGAALGLAGALMQTLTRNPLADPGILGVNSGASFAIVLGAALFGLSSPQEQLLMAFCGAFGASLLVAFTGSQGGGQLSPVRLTLAGVALAAVLEGLSSGIALLNPDVYDQLRFWQAGSLDVRTLQTLKIVLIPVLIAGLVTLLLSRALNSLSLGNDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPTLLLFADVLGRLLVPGELRVSVVSAFIGAPVLIWLVRRQPRGGGM

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Crispr_ID: NZ_CP042545_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042545_4

5489094-5489219

Orphan

Consensus_repeat	Method
TGGTCGCCCGGACAGGCGCGTCAAGCGCCGCCTCCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP042545_4

>merge|NZ_CP042545|4|5489094-5489219|CRISPRCasFinder
TGGTCGCCCGGACAGGCGCGTCAAGCGCCGCCTCCGGGGAAATCCCCGGTTGCGCTCACGCTTACCGGGGCTACAGTTCTGCGCGGTCTGGTAGCCCGGACAGGCGCGTCAAGCGCCGCCTCCGGG

>NZ_CP042545|4|4|5489094-5489219|CRISPRCasFinder
TGGTCGCCCGGACAGGCGCGTCAAGCGCCGCCTCCGGG	GAAATCCCCGGTTGCGCTCACGCTTACCGGGGCTACAGTTCTGCGCGGTC
TGGTAGCCCGGACAGGCGCGTCAAGCGCCGCCTCCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042545.1\|WP_004128539.1\|5483977_5484445_-\|membrane-protein	unknown	unknown	gnl\|CDD\|182513
NZ_CP042545.1\|WP_014227757.1\|5501357_5501660_-\|BrnA-antitoxin-family-protein	unknown	unknown	gnl\|CDD\|226045
NZ_CP042545.1\|WP_038424023.1\|5494721_5496191_+\|type-I-restriction-modification-system-subunit-M	unknown	unknown	gnl\|CDD\|280533
NZ_CP042545.1\|WP_038424025.1\|5491107_5492076_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042545.1\|WP_014227768.1\|5484437_5485121_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225851
NZ_CP042545.1\|WP_038424030.1\|5481775_5482543_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129344
NZ_CP042545.1\|WP_038424024.1\|5492217_5494647_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|226581
NZ_CP042545.1\|WP_038424027.1\|5487404_5488472_-\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP042545.1\|WP_038424026.1\|5489588_5491013_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP042545.1\|WP_004098266.1\|5485433_5486348_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176117
NZ_CP042545.1\|WP_032719936.1\|5498985_5499897_+\|acetamidase/formamidase-family-protein	unknown	unknown	gnl\|CDD\|225279
NZ_CP042545.1\|WP_014227766.1\|5488478_5488943_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|179596
NZ_CP042545.1\|WP_014227770.1\|5482539_5482794_+\|DUF3343-domain-containing-protein	unknown	unknown	gnl\|CDD\|378728
NZ_CP042545.1\|WP_032693016.1\|5480615_5481767_+\|2-hydroxyacyl-CoA-dehydratase-subunit-D	unknown	unknown	gnl\|CDD\|224689
NZ_CP042545.1\|WP_038424021.1\|5501646_5501934_-\|membrane-protein	unknown	unknown	gnl\|CDD\|225481
NZ_CP042545.1\|WP_064507003.1\|5489246_5489411_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP042545.1\|WP_032719935.1\|5499893_5501237_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP042545.1\|WP_014227760.1\|5498197_5498533_+\|endoribonuclease-SymE	unknown	unknown	gnl\|CDD\|237442
NZ_CP042545.1\|WP_038424029.1\|5482853_5483957_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349939
NZ_CP042545.1\|WP_038424028.1\|5486350_5487415_-\|DUF2955-domain-containing-protein	unknown	unknown	gnl\|CDD\|371403

Protein	Function_ID	Function_description	E-value
NZ_CP042545.1\|WP_004128539.1\|5483977_5484445_-\|membrane-protein	gnl\|CDD\|182513	PRK10519, PRK10519, hypothetical protein; Provisional.	9.84896e-72
NZ_CP042545.1\|WP_014227757.1\|5501357_5501660_-\|BrnA-antitoxin-family-protein	gnl\|CDD\|226045	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown].	1.24756e-20
NZ_CP042545.1\|WP_038424023.1\|5494721_5496191_+\|type-I-restriction-modification-system-subunit-M	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	1.5043e-120
NZ_CP042545.1\|WP_014227768.1\|5484437_5485121_-\|hypothetical-protein	gnl\|CDD\|225851	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown].	4.59501e-18
NZ_CP042545.1\|WP_038424030.1\|5481775_5482543_+\|hypothetical-protein	gnl\|CDD\|129344	TIGR00241, Uncharacterized_protein_MJ0004, CoA-substrate-specific enzyme activase, putative. This domain is found in a set of closely related proteins including the (R)-2-hydroxyglutaryl-CoA dehydratase activase of Acidaminococcus fermentans, in longer proteins from M. jannaschii and M. thermoautotrophicum that share an additional N-terminal domain, in a protein described as a subunit of the benzoyl-CoA reductase of Rhodopseudomonas palustris, and in two repeats of an uncharacterized protein of Aquifex aeolicus.This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.	5.92421e-113
NZ_CP042545.1\|WP_038424024.1\|5492217_5494647_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP042545.1\|WP_038424027.1\|5487404_5488472_-\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	4.48762e-62
NZ_CP042545.1\|WP_038424026.1\|5489588_5491013_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.73188e-148
NZ_CP042545.1\|WP_004098266.1\|5485433_5486348_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176117	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.62499e-82
NZ_CP042545.1\|WP_032719936.1\|5498985_5499897_+\|acetamidase/formamidase-family-protein	gnl\|CDD\|225279	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion].	6.96027e-98
NZ_CP042545.1\|WP_014227766.1\|5488478_5488943_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|179596	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional.	1.0958e-23
NZ_CP042545.1\|WP_014227770.1\|5482539_5482794_+\|DUF3343-domain-containing-protein	gnl\|CDD\|378728	pfam11823, DUF3343, Protein of unknown function (DUF3343). This family of proteins are functionally uncharacterized. This protein is found in bacteria and archaea. Proteins in this family are typically between 78 to 102 amino acids in length.	1.59643e-14
NZ_CP042545.1\|WP_032693016.1\|5480615_5481767_+\|2-hydroxyacyl-CoA-dehydratase-subunit-D	gnl\|CDD\|224689	COG1775, HgdB, Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB [Amino acid transport and metabolism].	2.93443e-150
NZ_CP042545.1\|WP_038424021.1\|5501646_5501934_-\|membrane-protein	gnl\|CDD\|225481	COG2929, COG2929, Uncharacterized protein conserved in bacteria [Function unknown].	6.00889e-36
NZ_CP042545.1\|WP_064507003.1\|5489246_5489411_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	2.9923e-10
NZ_CP042545.1\|WP_032719935.1\|5499893_5501237_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	8.98953e-38
NZ_CP042545.1\|WP_014227760.1\|5498197_5498533_+\|endoribonuclease-SymE	gnl\|CDD\|237442	PRK13605, PRK13605, endoribonuclease SymE; Provisional.	2.40564e-54
NZ_CP042545.1\|WP_038424029.1\|5482853_5483957_-\|amidohydrolase	gnl\|CDD\|349939	cd08018, M20_Acy1_amhX-like, M20 Peptidase aminoacylase 1 amhX-like subfamily. Peptidase M20 family, uncharacterized subfamily of proteins predicted as putative amidohydrolases, including the amhX gene product from Bacillus subtilis. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NZ_CP042545.1\|WP_038424028.1\|5486350_5487415_-\|DUF2955-domain-containing-protein	gnl\|CDD\|371403	pfam11168, DUF2955, Protein of unknown function (DUF2955). Some members in this family of proteins with unknown function annotate the proteins as membrane protein. However, this cannot be confirmed.	3.59026e-34

>NZ_CP042545.1|WP_014227766.1|5488478_5488943_-|MarR-family-transcriptional-regulator
MTEDDLFARRPMGMRMAMVVRQWRAIIDSAITDTGLTQSSWTVLMQLHQLGDNVSVSELAEVQGIELPPLMRTLTQLEKQGYLLRSTSPYDKRIRLLTLTAEGRAILEKLNRVIETYQQRVTETIPEAQLAAFSATLNQIACNLRTIREEDNKI
>NZ_CP042545.1|WP_038424027.1|5487404_5488472_-|HlyD-family-secretion-protein
MMTPEQKFARWVRVSIAAFLAIFAWFIVADIWIPLTPDSTVMRVVTPVSSRVSGYVSHVYVHNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIASARANLRTAQYTARNDKVTFNRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNASIQNLLIQRGERDDGRNVTLQKYRNALEEAQLNLGWTKVRAETDGMVSNLQLNPGLYATAATPLLALVSNQTDIVADFREKSLRHTGVNTDAAVVFDALPGKVFPAHVTSSDAGILAGQEEVNGQLSQPEQSTRWVRDAQRMRIHVALDEPLDKPLPTGARATVQLYNSDGPFARTFAGAQIHLVSFLHYVY
>NZ_CP042545.1|WP_038424028.1|5486350_5487415_-|DUF2955-domain-containing-protein
MSINTLARVFTPHGNIVYTANDFRQTLRIAVAGTIALSISTFYDVQYGVFFVVYPLMLLSLVPVFNRHVARQFVFSAAVNCVEMVLIVGYLSQWPVIMTLVVFGLYVMRFRFMSQGPLFLLGSMGVVCQSTMLNFMSYPTSNWHTLMFSNMEACVMAVALSALLNYFIPDVEPRKPPPRIEKDAARIRHESLLSGSVATMIFVIFQVCDLSDSLSALMAGILILFPMHYRGAVISSIWRVVGVVLACLYILVVQLIIYDFSNHMVLMMPLIGLGLAFSARLHVMEKVGAGVGFASITTIGIMFGQNLHPDQDLVFSDLYRITSVTVALLVTLTMVFLMHRLLDCFAPTRFVVTE
>NZ_CP042545.1|WP_004098266.1|5485433_5486348_+|LysR-family-transcriptional-regulator
MLHERPMSYLYEVGIQGGIRRAADMLGINPSVISRQIAQLERALELPLLERQGRNVVLTEAGRLLAEDYFESRQRREKLESHLKDLRHMRGGTISVRIGGGLVTTFIESVMSTFAQSWPNVFVDIIVGSMQEMLNDIASGEADMAVAFGPIGNPELKRHSFQWGPICAVVSPQHPIAALPAVTIDELTQYRLIALTDSFGLQRHMNAMFKTAGRQFHPAYRCNLFSTAMSLSQAGLGISFMTAYAAREAIAHGILTAVPIDHPIASSAQCHLLRNSDRRFSPAAHHMWRLLHNAFRDAQRALAA
>NZ_CP042545.1|WP_014227768.1|5484437_5485121_-|hypothetical-protein
MSENKTLECSSDETTNEWKVGPGAWISLIVVLLVFSGLLFKVEGMAWLGAFDFTTLGGAFGTMKTPETNTFIGSGGISAKAGFLFALSLVPTVMLALGLLEIFTHYGAIRAAHKLLTPLLRPLLGIPGYTGLALITDLQSTDAGAALTKELYDSDKINRKDLVIMGAWQYSGAGLINNYFSIGSALFASLTIPIIIPLLLMFVLKFVGAAITRLVLNTAYKRDFENE
>NZ_CP042545.1|WP_004128539.1|5483977_5484445_-|membrane-protein
MNNSAKVGSNPFDIFVIGARKGFNIAINNLMPNVLMAYVIAEMLNLLGVMQIIGHVCAPLMGLFGLPGEAITVLLTSWLSASAGTGVAVSLLSKGTLNVADITILIPAIFLMGSQLQYMGRLLGVADVPKKYWPLLMAVSIINAVIAMLVMRVIA
>NZ_CP042545.1|WP_038424029.1|5482853_5483957_-|amidohydrolase
MSRTLEHFNYLHQIPELGFEEHKTSAYIGDALEAAGFQVQRNVGTTTGIVALLDSGKPGPVVALRADMDALGHIIDGRLEARHTCGHDGHSSVVLTAAEEILAEGLVKRGKLKILFQPAEELGTGAIALTDAGALDDVEMLFGFHLRPLEECPKGKAVPAMYYSASATVMVDFHGKAAHAARPHLGVNALDAASHAVQAVNGIHLAPSLTWSAKATRFLCDAGVTNSVPAKAHVCWDLRSAENDGMATLKERVVRAIESSAAAYGATVDIQIVKEMPAAIIDEQATAIVSQAIRETFGEAGLTAAKSTPGSEDFFHYLRLRPQVKGGFWGLGCDLLPGLHHPEMRFDRAALADGVRVFKSCIRQLLG
>NZ_CP042545.1|WP_014227770.1|5482539_5482794_+|DUF3343-domain-containing-protein
MTEYLFLFHSTVGVVRMRKALQAAGASFRVKDIPRQLRGGCGLCIYLSCEPGEEQKWILPGQTEALFRVAGDDYQLLAQFPPQA
>NZ_CP042545.1|WP_038424030.1|5481775_5482543_+|hypothetical-protein
MTITVGIDSGSTATKGILLEDGVIQRRFLCPTPFRPADAIVEAWETLRAGLSERPFLTLTGYGRQLVDFADRQVTEISCHGLGARLLAPQTRTVIDIGGQDSKVIQLDEAGNLTDFLMNDKCAAGTGRFLEVISRTLGASIEQLDSITDGIEPHAITSMCTVFAESEVISLRSAGVTPEAILAGVINAMARRSANFIGRLSAQGPLLFTGGVSHCATFARRLEGHVGMAVQTHPDAQFAGAIGAALIGLRHRSRR
>NZ_CP042545.1|WP_032693016.1|5480615_5481767_+|2-hydroxyacyl-CoA-dehydratase-subunit-D
MSLITDLPAIFDHFSAARQQGFLTVMELKEQNIPLVGTYCTFMPQEIPLAAGAVVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKAVHVMQLPNSASDDASRALWKAEILRLQKVVEDRFGTPITEAALREAIILKNRERRALANFYRVGQLNPPALSGSDILKVVYGATFRFDKAALIDELNDMADRVRQQWQEGKRLEARPRILITGCPIGGAAEKVVKAIEDNGGWVVGFENCTGAKATERCVEETGDVYDALTEKYLAIGCSCISPNDQRLSLLSQMVGEYQADGVVDVILQACHTYAVESLAIKRHVRQQHDIPYIAIETDYSTADIGQLSTRVAAFIEML
>NZ_CP042545.1|WP_064507003.1|5489246_5489411_-|DUF1127-domain-containing-protein
MEFHENRARQPFIGFVFLARVIKKWWLREQTRRTLQRMSDEQLKDVGLRRDQIN
>NZ_CP042545.1|WP_038424026.1|5489588_5491013_+|PLP-dependent-aminotransferase-family-protein
MTRYQHLASLLAERIEQGLYRPGEKLPSVRSLSQEHGVSISTVQQAYQMLEQQQLIVPQPRSGYFVAPRKAQPPVPPMSRPVQRPVEITQWDQVLTMLDARHDKSIIPFGGGSPDVTQPSLKPIWRELSRAIQHNLSEVLNYDELAGRRELREQIARLMLDGGSVVTANDLVLTSGCHSALSLALLSVCQPGDIVAVESPCYYGTMQMLRGLGLKTIEIPTDPETGISIEALELALDQWPIKGVILVPNCNNPLGFIMPDARKRAALCLAQRHDIVIFEDDIYGELATEYPRPRTIHSWDIDGRVMLCSSFTKTIAPGLRIGWIAPGRYYDRLLQMKYAASGTNVPSTQLAACNFIREGHYHRHVRRMRQIYQRNMEIYTCWLREFFPCGICVTRPKGGFMLWVELPEQVDMVCVAKQLCRLKIQVAPGSLFSASGKYRNCLRINCALPPTDKHKEVMVQLGMAVKVAMEWAPE
>NZ_CP042545.1|WP_038424025.1|5491107_5492076_-|hypothetical-protein
MEIIKIWKSFLKHFKQKKLDSAVVIYGAIAIYLIPYKFPLKSYLVAFLFISILIFACTQEFRLREYINFFVRTCNDHLLTRFAGILSLTAWSIFLLLLLSANVFVNTITYWLAIFFSLLILISSILTVLDIARNNTAKTLKIISLAVTVFSGVFTFTSSYSASIFWQISNLELSFSPWLEYCWKATAYLMFFLWLSQPICYGLFIIYGDKAKGYRIFTLTGAFIMSVFLFLLVPKLFGDAAYYVLNRTINYEWRDEAKCGELKVKNKNEKYFGFNTDKYTVFYTDKNDKWGFYELTCQKGSNRKDFYAVEYLPEYNIPAWLK
>NZ_CP042545.1|WP_038424024.1|5492217_5494647_+|DEAD/DEAH-box-helicase
MADLNLSTLTEADIITKRVMPAILDAGWSDTTQIRQEVKLRDGKVIVRGKVAARRTVKSADIVLYHKPGIPLAVIEAKANKHEIGKGMQQGIEYARLLDVPFVFATNGDGFIFRDATVADGELMEKPITLGEFPSPSELWQKLCLSKGYTEAQLPVITQDYYDDGSGKAPRYYQLQAINKTIEAVSAGQNRVLLVMATGTGKTYTAFQIIWRLWKAKSKKRILFLADRNILVDQTKNNDFLPFGTAMTKVTGRTIDPAFEIHLALYQAITGPEEDQKAFKQVAPDFFDLIVIDECHRGSASEDSAWREILDYFSAATQIGLTATPKETHEVSSTDYFGDPVYIYSLKEGIEDGFLAPYKVVRVDIDVDLQGWRPTKGQTDKNGELIDDRIYNQKDFDRTMVIDERTELVAKTITDYLKRTNPMDKTIIFCNDIDHAERMRRALVNLNPEQVKKSDKYVMKITGDDDIGKAQLDNFINPKKEYPVIATTSELMTTGVDAKTCKLVVLDQNIQSMTKFKQIIGRGTRIDERYGKLWFTILDFKKATELFADERFDGIPEKVMDTTPQDIADPESDFEEQFDEHEEETEDDITGVDEDPAPYTVTDSGDVGPLPEEDENKVRKFHVNGVAVGVIAQRVQYYDADGKLVTESFKDYTRKTLLKEYASLDDFTRKWQGAERKQAIIKELEQQGIIWEVLAEEVGKELDPFDMLCHVVYGQPPLTRKERAENVRKRNYFTKYSDAAQAVLNTLLDKYADAGVQEIESIQVLKLKPFDSMGTLPEIIKSGFGDRNGYNQAISELESEIYHLPPRSA
>NZ_CP042545.1|WP_038424023.1|5494721_5496191_+|type-I-restriction-modification-system-subunit-M
MSISSVIKSLQDIMRKDAGVDGDAQRLGQLSWLLFLKIFDAQEEALELEQDNYQYPIPQRYLWRTWAANAEGITGDALLEFVNDDLFPTLKNLTAPIDKNPRGFVVRQAFSDAYNYMKNGTLLRQVINKLNEIDFTSASERHLFGDIYEQILKDLQSAGNAGEFYTPRAVTRFMVDRVDPKLGESIMDPACGTGGFLACAFDHVKNNYVKSVADHQTLQQQIHGVEKKQLPHLLATTNMLLHGIEVPVQIRHDNTLNKPLSSWDEQLDVIVTNPPFGGTEEDGIEKNFPAEMQTRETADLFLQLIIEVLAKNGRAAVVLPDGTLFGEGVKTKIKKLLTEECNLHTIVRLPNGVFNPYTGIKTNLLFFTKGQPTKDIWFYEHPYPAGVKNYSKTKPMKFEEFQAEIDWWGNEADGFASRVENEQAWKVSIDEVIARNFNLDIKNPHQAETVSHDPDELLAQYAKQQEAIQTLRHQLRDILGAALSGKEAN
>NZ_CP042545.1|WP_014227760.1|5498197_5498533_+|endoribonuclease-SymE
MTTPHSIAEFTDPEVSPENNRKGTVSYASRFEDHQRIPAIIMKGQWLAAAGFATGAKIDIKVMEGCIVITAKQPEPELVESLRQLHKLSARKQKQVQALIGAIAGQKRKLA
>NZ_CP042545.1|WP_032719936.1|5498985_5499897_+|acetamidase/formamidase-family-protein
MKITKDQVVYAMSRDNAPVATVSSGSEVLFETCDCFSDQITSADAVFNELDWQRINPATGPVYVEGAEPGDALKVTIKRITLSSQQAVMVTAPQLGVIGDELDAPKVTIVPIENDHAVLPGNVRVPLNPMVGVIGVAPAGEAISCGTPDSHGGNMDCKMITAGSTLWLPVNVPGALFGLGDLHAAMGDGEVSVCGLEIPGEVLVELTVVKNRRLPLPMLENSETLFTLASALTLDDAAALATRNMAHFIADNTSLALAEAISILSIAGDLQICQVVDPLKTCRYALPKSVAEQLSLSIEGEQA
>NZ_CP042545.1|WP_032719935.1|5499893_5501237_+|APC-family-permease
MSVEQFGYKQELHRALTFRDLLVYGMIFMVPIAPFGVFGYVWDGAQGMVALAYLIGMVAMFFTAMSYWSMSRAFPVSGSVYAYAQRGIHPIVGFFAGWLILLDYILVPSLLYIVSAAALAPMLPGVPGWLWIVGFIAINSLINLRGITFTARANNTILIAEIVVLSVFVVLGLIALYSGAGAGHLTLDPLYNADKFSLPLVMGAVSIAVLSFLGFDGISTLSEETKGGVDTVGKASLGALMLVGSLFILQTWIAADLAQGMTFSSLDTAFYDTANLAGGGWLKYVTMWSTVISWGIANALVAQAAVSRILFAMARDKQLPQLLAKVHPRLKTPYVSTLFVALISLASGLWFYGDIDNLSRLVNFGALMGFLVLHIAVINHYIIRQKSRNLVVHLLFPLVGLCIIGFVIYEMDAQAKVLGLSWLAVGVVYYLLMRLVLKRNVELKLEG
>NZ_CP042545.1|WP_014227757.1|5501357_5501660_-|BrnA-antitoxin-family-protein
MNMVKHKRDNPDTLTAKRDDELKALANKTDDEIDYSDIPATDDAQWSDAVRGKFYRPLKTQASVRIDADIMEWLKRPGKGYQTRLNAILREAMIRDLNKK
>NZ_CP042545.1|WP_038424021.1|5501646_5501934_-|membrane-protein
MPMEFEWDANKARSNLRKHGIRFEEAVLVFDDPRHLSRQDRYENGEYRWQTLGLVHGIIVIMVAHSVRFESGTEVIRIISARKADSKERNRYEHG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP022118	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence	380154-380185	2	0.938
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP030176	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence	104205-104236	2	0.938
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP026283	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence	32224-32255	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP014073	Klebsiella quasipneumoniae strain FDAARGOS_93 plasmid unnamed2, complete sequence	121749-121780	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP032197	Klebsiella pneumoniae strain AR_0097 plasmid unnamed3, complete sequence	61807-61838	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_KP345882	Escherichia coli strain BK32533 plasmid pBK32533, complete sequence	15850-15881	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP043048	Klebsiella pneumoniae strain KLP268 plasmid pKLP268-2, complete sequence	36554-36585	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP019900	Raoultella planticola strain GODA plasmid unnamed1, complete sequence	31159-31190	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP029448	Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence	184972-185003	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_KJ721789	Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence	87219-87250	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP025039	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_2, complete sequence	1948-1979	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP031811	Klebsiella pneumoniae strain INF014-sc-2279884 plasmid unnamed1, complete sequence	160072-160103	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP020851	Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence	86044-86075	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	MN310379	Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence	180553-180584	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	MN310380	Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence	153684-153715	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP023840	Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.1, complete sequence	13418-13449	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP018815	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 plasmid tig00000003, complete sequence	96313-96344	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	198101-198132	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP027616	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed4, complete sequence	96499-96530	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP010881	Escherichia coli strain MNCRE44 plasmid pMNCRE44_5, complete sequence	110494-110525	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP009275	Klebsiella variicola strain DX120E plasmid pKV1, complete sequence	63439-63470	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NC_025131	Klebsiella pneumoniae strain BK30683 plasmid pBK30683, complete sequence	83844-83875	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP029583	Klebsiella pneumoniae strain DA33140 plasmid pDA33140-112, complete sequence	98483-98514	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP010363	Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-139.941kb, complete sequence	30013-30044	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP029598	Klebsiella quasipneumoniae subsp. similipneumoniae strain ATCC 700603 plasmid pDA33145-152, complete sequence	150899-150930	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	CP008701	Klebsiella variicola strain Kp5-1 plasmid pKp5-1, complete sequence	123521-123552	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP009773	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pKPC-63d, complete sequence	15852-15883	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP009776	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPC-def, complete sequence	15844-15875	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP006926	Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N2, complete sequence	15852-15883	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP022825	Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-2, complete sequence	45342-45373	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP015387	Klebsiella pneumoniae strain NY9 plasmid pNY9_2, complete sequence	83836-83867	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP038276	Raoultella ornithinolytica strain WLK218 plasmid pWLK-107717, complete sequence	26799-26830	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NC_021199	Klebsiella pneumoniae subsp. pneumoniae KPX plasmid pKPX-2 DNA, complete sequence	15327-15358	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP011641	Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence	129965-129996	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	34201-34232	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	47402-47433	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP014697	Klebsiella quasipneumoniae strain ATCC 700603 isolate K6 plasmid pKQPS1, complete sequence	42078-42109	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	256525-256556	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP013986	Klebsiella variicola strain LMG 23571 plasmid unnamed, complete sequence	15757-15788	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP035211	Klebsiella pneumoniae strain TH164 plasmid pTH164-2, complete sequence	125920-125951	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP024543	Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence	56886-56917	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP045691	Klebsiella pneumoniae strain TK421 plasmid pTK421_1, complete sequence	67607-67638	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP026016	Klebsiella variicola strain 13450 plasmid p13450-2, complete sequence	103997-104028	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP021900	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0136 plasmid tig00001437_pilon, complete sequence	18960-18991	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP021778	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0053 plasmid unitig_3, complete sequence	6216-6247	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP044049	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence	108487-108518	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_LR130540	Klebsiella variicola strain AJ055 isolate AJ055 plasmid 2	151980-152011	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	155914-155945	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	171530-171561	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	171657-171688	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_MG462728	Escherichia coli strain AMA1416 plasmid pAMA1416, complete sequence	180671-180702	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP033755	Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed1, complete sequence	19828-19859	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	NZ_CP054255	Klebsiella variicola strain FH-1 plasmid unnamed, complete sequence	96507-96538	3	0.906
NZ_CP042545_2	2.1\|4230263\|32\|NZ_CP042545\|CRT	4230263-4230294	32	MN310379	Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence	173343-173374	4	0.875
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP022118	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence	380153-380189	6	0.838
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP030176	Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence	104204-104240	6	0.838
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP032197	Klebsiella pneumoniae strain AR_0097 plasmid unnamed3, complete sequence	61806-61842	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_KP345882	Escherichia coli strain BK32533 plasmid pBK32533, complete sequence	15849-15885	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP043048	Klebsiella pneumoniae strain KLP268 plasmid pKLP268-2, complete sequence	36553-36589	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP019900	Raoultella planticola strain GODA plasmid unnamed1, complete sequence	31158-31194	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP029448	Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence	184971-185007	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_KJ721789	Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence	87218-87254	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP025039	Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_2, complete sequence	1947-1983	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP020851	Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence	86043-86079	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP023840	Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.1, complete sequence	13417-13453	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP009275	Klebsiella variicola strain DX120E plasmid pKV1, complete sequence	63438-63474	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NC_025131	Klebsiella pneumoniae strain BK30683 plasmid pBK30683, complete sequence	83843-83879	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP010363	Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-139.941kb, complete sequence	30012-30048	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	CP008701	Klebsiella variicola strain Kp5-1 plasmid pKp5-1, complete sequence	123520-123556	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP009773	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pKPC-63d, complete sequence	15851-15887	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP009776	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPC-def, complete sequence	15843-15879	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP006926	Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N2, complete sequence	15851-15887	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP022825	Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-2, complete sequence	45341-45377	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP015387	Klebsiella pneumoniae strain NY9 plasmid pNY9_2, complete sequence	83835-83871	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NC_021199	Klebsiella pneumoniae subsp. pneumoniae KPX plasmid pKPX-2 DNA, complete sequence	15326-15362	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP024543	Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence	56885-56921	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP045691	Klebsiella pneumoniae strain TK421 plasmid pTK421_1, complete sequence	67606-67642	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP026016	Klebsiella variicola strain 13450 plasmid p13450-2, complete sequence	103996-104032	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP033755	Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed1, complete sequence	19827-19863	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP026283	Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence	32220-32256	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP014073	Klebsiella quasipneumoniae strain FDAARGOS_93 plasmid unnamed2, complete sequence	121745-121781	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP031811	Klebsiella pneumoniae strain INF014-sc-2279884 plasmid unnamed1, complete sequence	160068-160104	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	MN310379	Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence	180549-180585	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	MN310380	Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence	153680-153716	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP018815	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 plasmid tig00000003, complete sequence	96309-96345	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	198097-198133	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP027616	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed4, complete sequence	96495-96531	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP010881	Escherichia coli strain MNCRE44 plasmid pMNCRE44_5, complete sequence	110490-110526	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP029583	Klebsiella pneumoniae strain DA33140 plasmid pDA33140-112, complete sequence	98479-98515	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP029598	Klebsiella quasipneumoniae subsp. similipneumoniae strain ATCC 700603 plasmid pDA33145-152, complete sequence	150895-150931	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP038276	Raoultella ornithinolytica strain WLK218 plasmid pWLK-107717, complete sequence	26795-26831	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP011641	Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence	129961-129997	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	34197-34233	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP011633	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence	47398-47434	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP014697	Klebsiella quasipneumoniae strain ATCC 700603 isolate K6 plasmid pKQPS1, complete sequence	42074-42110	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	256521-256557	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP013986	Klebsiella variicola strain LMG 23571 plasmid unnamed, complete sequence	15753-15789	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP035211	Klebsiella pneumoniae strain TH164 plasmid pTH164-2, complete sequence	125916-125952	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP021900	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0136 plasmid tig00001437_pilon, complete sequence	18956-18992	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP021778	UNVERIFIED_ORG: Enterobacter cloacae strain AR_0053 plasmid unitig_3, complete sequence	6212-6248	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP044049	Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence	108483-108519	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_LR130540	Klebsiella variicola strain AJ055 isolate AJ055 plasmid 2	151976-152012	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	155910-155946	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	171526-171562	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP032357	Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence	171653-171689	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_MG462728	Escherichia coli strain AMA1416 plasmid pAMA1416, complete sequence	180667-180703	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	NZ_CP054255	Klebsiella variicola strain FH-1 plasmid unnamed, complete sequence	96503-96539	7	0.811
NZ_CP042545_2	2.4\|4230262\|37\|NZ_CP042545\|CRISPRCasFinder	4230262-4230298	37	MN310379	Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence	173339-173375	8	0.784

1. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
tagagccacaacctgtcgcattggctgtccag	Protospacer
**.*****.***********************

2. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP030176 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence) position: , mismatch: 2, identity: 0.938

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
tagagccacaacctgtcgcattggctgtccag	Protospacer
**.*****.***********************

3. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP026283 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

4. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP014073 (Klebsiella quasipneumoniae strain FDAARGOS_93 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

5. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP032197 (Klebsiella pneumoniae strain AR_0097 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

6. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_KP345882 (Escherichia coli strain BK32533 plasmid pBK32533, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

7. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP043048 (Klebsiella pneumoniae strain KLP268 plasmid pKLP268-2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

8. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP019900 (Raoultella planticola strain GODA plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

9. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP029448 (Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

10. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_KJ721789 (Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

11. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP025039 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

12. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP031811 (Klebsiella pneumoniae strain INF014-sc-2279884 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

13. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP020851 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

14. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to MN310379 (Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

15. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to MN310380 (Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

16. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP023840 (Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

17. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP018815 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 plasmid tig00000003, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

18. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

19. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP027616 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

20. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP010881 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_5, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

21. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP009275 (Klebsiella variicola strain DX120E plasmid pKV1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

22. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NC_025131 (Klebsiella pneumoniae strain BK30683 plasmid pBK30683, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

23. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP029583 (Klebsiella pneumoniae strain DA33140 plasmid pDA33140-112, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

24. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP010363 (Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-139.941kb, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

25. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP029598 (Klebsiella quasipneumoniae subsp. similipneumoniae strain ATCC 700603 plasmid pDA33145-152, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

26. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to CP008701 (Klebsiella variicola strain Kp5-1 plasmid pKp5-1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

27. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP009773 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pKPC-63d, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

28. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP009776 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPC-def, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

29. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP006926 (Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

30. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP022825 (Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

31. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP015387 (Klebsiella pneumoniae strain NY9 plasmid pNY9_2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

32. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP038276 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-107717, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

33. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NC_021199 (Klebsiella pneumoniae subsp. pneumoniae KPX plasmid pKPX-2 DNA, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

34. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP011641 (Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

35. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

36. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

37. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP014697 (Klebsiella quasipneumoniae strain ATCC 700603 isolate K6 plasmid pKQPS1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

38. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

39. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP013986 (Klebsiella variicola strain LMG 23571 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

40. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP035211 (Klebsiella pneumoniae strain TH164 plasmid pTH164-2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

41. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP024543 (Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

42. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP045691 (Klebsiella pneumoniae strain TK421 plasmid pTK421_1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

43. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP026016 (Klebsiella variicola strain 13450 plasmid p13450-2, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

44. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP021900 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0136 plasmid tig00001437_pilon, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

45. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP021778 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0053 plasmid unitig_3, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

46. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP044049 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

47. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_LR130540 (Klebsiella variicola strain AJ055 isolate AJ055 plasmid 2) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

48. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

49. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

50. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

51. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_MG462728 (Escherichia coli strain AMA1416 plasmid pAMA1416, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

52. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP033755 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

53. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to NZ_CP054255 (Klebsiella variicola strain FH-1 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattggctgtccag	Protospacer
.* *****.***********************

54. spacer 2.1|4230263|32|NZ_CP042545|CRT matches to MN310379 (Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence) position: , mismatch: 4, identity: 0.875

taaagccataacctgtcgcattggctgtccag	CRISPR spacer
catagccacaacctgtcgcattagctgtccag	Protospacer
.* *****.*************.*********

55. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.838

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
atagagccacaacctgtcgcattggctgtccagggtg	Protospacer
.**.*****.***********************  *

56. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP030176 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.1, complete sequence) position: , mismatch: 6, identity: 0.838

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
atagagccacaacctgtcgcattggctgtccagggtg	Protospacer
.**.*****.***********************  *

57. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP032197 (Klebsiella pneumoniae strain AR_0097 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

58. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_KP345882 (Escherichia coli strain BK32533 plasmid pBK32533, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

59. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP043048 (Klebsiella pneumoniae strain KLP268 plasmid pKLP268-2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

60. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP019900 (Raoultella planticola strain GODA plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

61. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP029448 (Serratia marcescens strain CAV1761 plasmid pCAV1761-205, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

62. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_KJ721789 (Klebsiella pneumoniae strain NJ HT1872 plasmid pUSKPC3, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

63. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP025039 (Klebsiella pneumoniae strain NU-CRE047 plasmid pNU-CRE047_2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

64. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP020851 (Klebsiella variicola strain KPN1481 plasmid pKPN1481-2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

65. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP023840 (Klebsiella pneumoniae strain 4/1-2 plasmid p4_1_2.1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

66. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP009275 (Klebsiella variicola strain DX120E plasmid pKV1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

67. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NC_025131 (Klebsiella pneumoniae strain BK30683 plasmid pBK30683, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

68. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP010363 (Enterobacter hormaechei subsp. oharae strain 34978 plasmid p34978-139.941kb, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

69. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to CP008701 (Klebsiella variicola strain Kp5-1 plasmid pKp5-1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

70. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP009773 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH33 plasmid pKPC-63d, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

71. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP009776 (Klebsiella pneumoniae subsp. pneumoniae strain KPNIH32 plasmid pKPC-def, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

72. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP006926 (Klebsiella pneumoniae 30660/NJST258_1 plasmid pNJST258N2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

73. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP022825 (Klebsiella quasivariicola strain KPN1705 plasmid pKPN1705-2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

74. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP015387 (Klebsiella pneumoniae strain NY9 plasmid pNY9_2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

75. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NC_021199 (Klebsiella pneumoniae subsp. pneumoniae KPX plasmid pKPX-2 DNA, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

76. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP024543 (Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

77. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP045691 (Klebsiella pneumoniae strain TK421 plasmid pTK421_1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

78. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP026016 (Klebsiella variicola strain 13450 plasmid p13450-2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

79. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP033755 (Klebsiella pneumoniae strain FDAARGOS_566 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

80. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP026283 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-e6bf, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

81. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP014073 (Klebsiella quasipneumoniae strain FDAARGOS_93 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

82. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP031811 (Klebsiella pneumoniae strain INF014-sc-2279884 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

83. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to MN310379 (Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

84. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to MN310380 (Raoultella ornithinolytica strain 170602815 plasmid p602815-NR, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

85. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP018815 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0002 plasmid tig00000003, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

86. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

87. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP027616 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

88. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP010881 (Escherichia coli strain MNCRE44 plasmid pMNCRE44_5, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

89. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP029583 (Klebsiella pneumoniae strain DA33140 plasmid pDA33140-112, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

90. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP029598 (Klebsiella quasipneumoniae subsp. similipneumoniae strain ATCC 700603 plasmid pDA33145-152, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

91. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP038276 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-107717, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

92. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP011641 (Serratia marcescens strain CAV1492 plasmid pCAV1492-199, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

93. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

94. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP011633 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-150, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

95. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP014697 (Klebsiella quasipneumoniae strain ATCC 700603 isolate K6 plasmid pKQPS1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

96. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

97. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP013986 (Klebsiella variicola strain LMG 23571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

98. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP035211 (Klebsiella pneumoniae strain TH164 plasmid pTH164-2, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

99. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP021900 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0136 plasmid tig00001437_pilon, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

100. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP021778 (UNVERIFIED_ORG: Enterobacter cloacae strain AR_0053 plasmid unitig_3, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

101. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP044049 (Klebsiella variicola strain FDAARGOS_627 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

102. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_LR130540 (Klebsiella variicola strain AJ055 isolate AJ055 plasmid 2) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

103. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

104. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

105. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP032357 (Klebsiella variicola strain 15WZ-82 plasmid p15WZ-82_res, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

106. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_MG462728 (Escherichia coli strain AMA1416 plasmid pAMA1416, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

107. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to NZ_CP054255 (Klebsiella variicola strain FH-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.811

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattggctgtccagggtg	Protospacer
..* *****.***********************  *

108. spacer 2.4|4230262|37|NZ_CP042545|CRISPRCasFinder matches to MN310379 (Klebsiella quasipneumoniae strain A2508 plasmid pA2508-NR, complete sequence) position: , mismatch: 8, identity: 0.784

gtaaagccataacctgtcgcattggctgtccagtttc	CRISPR spacer
acatagccacaacctgtcgcattagctgtccagggtg	Protospacer
..* *****.*************.*********  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1696292 : 1778380

Klebsiella_phage(61.11%)

portal,holin,tRNA,integrase,capsid,transposase,head,protease,tail,terminase

attL 1685311:1685326|attR 1770820:1770835

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1685311:1685326	attL	NA	NA	NA	NA
WP_038424856.1\|1696292_1697468_-\|integrase	site-specific integrase	I6PDJ1	Cronobacter_phage	8.4e-206	92.2
WP_032422780.1\|1697422_1697635_-	hypothetical protein	I6PBM8	Cronobacter_phage	1.2e-25	76.1
WP_004177218.1\|1697767_1697989_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	2.6e-28	87.7
WP_038424853.1\|1697978_1698689_-	DNA-binding protein	A0A286S260	Klebsiella_phage	9.8e-109	86.2
WP_038424852.1\|1698694_1699213_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	4.2e-85	88.4
WP_038424851.1\|1699253_1699694_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	2.3e-60	81.9
WP_004177208.1\|1699690_1699909_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
WP_038424849.1\|1699880_1700135_-	hypothetical protein	A0A286SGR4	Klebsiella_phage	2.9e-39	94.0
WP_038424848.1\|1700127_1700493_-	hypothetical protein	A0A286S1Q6	Klebsiella_phage	5.8e-57	98.3
WP_004152159.1\|1700661_1700850_-	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152160.1\|1700842_1701157_-	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152161.1\|1701326_1701995_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152162.1\|1702092_1702314_+	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004152163.1\|1702288_1702582_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	2.8e-38	97.6
WP_038424846.1\|1702842_1703214_+	hypothetical protein	A0A286S263	Klebsiella_phage	7.5e-60	92.6
WP_051800680.1\|1703248_1704895_+	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	1.8e-275	82.4
WP_071889115.1\|1704896_1705859_+	DNA primase	A0A286N2Q0	Klebsiella_phage	8.1e-183	99.4
WP_023317656.1\|1705855_1706332_+	hypothetical protein	A0A286N2Q1	Klebsiella_phage	2.6e-89	98.7
WP_038424844.1\|1706328_1707111_+	antitermination protein	F1C595	Cronobacter_phage	6.5e-114	77.9
WP_038424843.1\|1707716_1708064_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	2.3e-39	72.9
WP_004884314.1\|1708066_1708606_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	6.7e-102	99.4
WP_038424841.1\|1708602_1708950_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.0e-39	80.0
WP_038424839.1\|1708946_1709222_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	1.3e-05	90.1
WP_038424837.1\|1709172_1709370_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	5.9e-24	86.9
WP_031592522.1\|1709440_1709929_+	hypothetical protein	NA	NA	NA	NA
WP_031592520.1\|1710013_1710403_+	hypothetical protein	Q1MVJ1	Enterobacteria_phage	8.7e-27	48.4
WP_038424834.1\|1710469_1710715_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.9e-35	98.8
WP_038424832.1\|1710789_1711251_-	hypothetical protein	NA	NA	NA	NA
WP_038424831.1\|1711450_1711804_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	9.0e-47	73.6
WP_004177162.1\|1711986_1712451_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	3.7e-48	61.4
WP_038424829.1\|1712404_1714147_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	2.4e-140	46.2
WP_038424827.1\|1714146_1715454_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	6.6e-212	84.4
WP_038424825.1\|1715466_1716315_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.2e-134	88.6
WP_038424824.1\|1716324_1717542_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	2.7e-183	82.2
WP_038424822.1\|1717584_1717872_+	hypothetical protein	K7PHI6	Enterobacteria_phage	1.2e-09	68.1
WP_004886703.1\|1717871_1718198_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	3.6e-42	72.2
WP_038424820.1\|1718267_1718465_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	2.7e-24	95.4
WP_004184710.1\|1718466_1718799_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	3.1e-57	100.0
WP_038424818.1\|1718791_1719331_+	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	8.8e-94	98.9
WP_038424817.1\|1719327_1719693_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	1.7e-64	96.7
WP_004104226.1\|1719750_1720242_+	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.5e-87	99.4
WP_032440655.1\|1720285_1720639_+\|tail	phage tail assembly protein	A0A286S1N4	Klebsiella_phage	1.4e-60	98.3
WP_038424812.1\|1720671_1720935_+	hypothetical protein	A0A286S1P2	Klebsiella_phage	1.3e-42	97.7
WP_038424810.1\|1721000_1721468_+	hypothetical protein	NA	NA	NA	NA
WP_038424807.1\|1721512_1723960_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	2.4e-263	63.9
WP_038424804.1\|1723959_1724439_+	hypothetical protein	A0A286S298	Klebsiella_phage	6.6e-93	98.7
WP_038424802.1\|1724425_1724908_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.3e-83	96.9
WP_038424801.1\|1724917_1725298_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	3.4e-68	92.9
WP_038424799.1\|1725294_1728363_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	98.5
WP_038424797.1\|1731730_1731970_+	hypothetical protein	NA	NA	NA	NA
WP_038424795.1\|1732338_1732656_+	hypothetical protein	NA	NA	NA	NA
WP_038424793.1\|1732667_1733549_-	hypothetical protein	NA	NA	NA	NA
WP_004892499.1\|1734095_1734518_+	hypothetical protein	K7P834	Enterobacteria_phage	1.8e-25	44.5
WP_038424792.1\|1734923_1735172_-	DinI-like family protein	S5MQI1	Escherichia_phage	4.7e-26	71.6
WP_004104655.1\|1735950_1736433_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.8e-29	47.4
WP_029946935.1\|1736543_1737020_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_014226445.1\|1737009_1737300_+	RnfH family protein	NA	NA	NA	NA
WP_004123807.1\|1737366_1737708_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_014839242.1\|1737855_1739517_-	DNA repair protein RecN	NA	NA	NA	NA
WP_004123797.1\|1739603_1740482_-	NAD(+) kinase	NA	NA	NA	NA
WP_004853330.1\|1740607_1741198_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_014839241.1\|1741262_1742552_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_004853326.1\|1742570_1743362_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_004123779.1\|1743526_1744894_+	signal recognition particle protein	NA	NA	NA	NA
WP_004123777.1\|1745130_1745379_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_014226441.1\|1745397_1745946_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_004104636.1\|1745991_1746759_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_004104634.1\|1746798_1747146_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_014839240.1\|1747266_1747704_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_032720460.1\|1747758_1749129_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_014226437.1\|1749133_1749616_-	OmpA family protein	NA	NA	NA	NA
WP_014839238.1\|1749627_1750851_-	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_004853313.1\|1750843_1751353_-	YfiR family protein	NA	NA	NA	NA
WP_014226435.1\|1751697_1752768_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.8e-91	51.8
WP_014226434.1\|1752777_1753899_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_014226433.1\|1753967_1754840_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_004853306.1\|1754836_1755997_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_101706155.1\|1756103_1756151_-	hypothetical protein	NA	NA	NA	NA
WP_004104616.1\|1756258_1756594_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_004853303.1\|1756865_1757603_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_004853302.1\|1757735_1758716_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_032720461.1\|1758712_1759444_+	polyphenol oxidase	NA	NA	NA	NA
WP_014226431.1\|1759571_1762145_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	3.1e-128	35.7
WP_032721880.1\|1767971_1768427_+	DUF4385 domain-containing protein	M4QHR1	Cyanophage	1.1e-31	47.6
WP_038424788.1\|1768700_1769999_+	MFS transporter	Q6JIH2	Burkholderia_virus	1.8e-44	31.5
WP_038424787.1\|1770001_1770328_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_014230410.1\|1770367_1771723_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
1770820:1770835	attR	NA	NA	NA	NA
WP_038424785.1\|1771816_1774495_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_014839228.1\|1774530_1775229_-	DTW domain-containing protein	NA	NA	NA	NA
WP_004104599.1\|1775298_1775724_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	4.6e-13	40.2
WP_004123719.1\|1775927_1777001_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_038424783.1\|1777051_1778380_-\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

2044991 : 2117150

Pseudomonas_phage(13.33%)

holin,integrase,plate,transposase,protease

attL 2040455:2040472|attR 2073178:2073195

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2040455:2040472	attL	NA	NA	NA	NA
WP_014839116.1\|2044991_2045543_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	2.1e-50	51.6
WP_014839114.1\|2045968_2046505_+	fimbrial protein	NA	NA	NA	NA
WP_014230248.1\|2046567_2047230_+	molecular chaperone	NA	NA	NA	NA
WP_038424737.1\|2047260_2049810_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_014230246.1\|2049829_2050870_+	fimbrial protein	NA	NA	NA	NA
WP_014839112.1\|2050882_2051392_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_025106684.1\|2051425_2051956_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_038424736.1\|2052002_2052923_-	ribonuclease Z	NA	NA	NA	NA
WP_004852808.1\|2053107_2053569_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_038424735.1\|2053666_2054962_+	isochorismate synthase MenF	NA	NA	NA	NA
WP_038424734.1\|2055039_2056710_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA
WP_038424733.1\|2056706_2057465_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA
WP_004123101.1\|2057479_2058337_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_032694823.1\|2058336_2059302_+	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_038424732.1\|2059298_2060690_+	o-succinylbenzoate--CoA ligase	NA	NA	NA	NA
WP_038424731.1\|2060666_2061290_-	DUF2238 domain-containing protein	NA	NA	NA	NA
WP_014230236.1\|2061395_2062916_-	tripartite tricarboxylate transporter permease	NA	NA	NA	NA
WP_032718777.1\|2062927_2063359_-	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA
WP_038424730.1\|2063374_2064355_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_014230233.1\|2064489_2065164_+	transcriptional regulator TctD	NA	NA	NA	NA
WP_038424729.1\|2065150_2066566_+	sensor histidine kinase	NA	NA	NA	NA
WP_014230231.1\|2066557_2066983_-	nucleoside triphosphatase NudI	NA	NA	NA	NA
WP_038424728.1\|2067120_2068113_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.2e-73	56.3
WP_014230229.1\|2068161_2069610_-	catalase	A0A2K9L0T1	Tupanvirus	6.9e-101	46.7
WP_004123076.1\|2069879_2070422_+	membrane protein	NA	NA	NA	NA
WP_014230228.1\|2070518_2071715_+	nicotinamide mononucleotide deamidase-related protein YfaY	NA	NA	NA	NA
WP_004852774.1\|2071919_2072702_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_014839100.1\|2072715_2073921_+	L-rhamnonate dehydratase	Q6A202	Oenococcus_phage	1.8e-25	28.3
2073178:2073195	attR	NA	NA	NA	NA
WP_004852770.1\|2073973_2075263_+	MFS transporter	NA	NA	NA	NA
WP_014839099.1\|2075277_2076081_+	2-keto-3-deoxy-L-rhamnonate aldolase	NA	NA	NA	NA
WP_014839098.1\|2076103_2077282_-	anaerobic glycerol-3-phosphate dehydrogenase subunit C	NA	NA	NA	NA
WP_038424727.1\|2077278_2078538_-	glycerol-3-phosphate dehydrogenase subunit GlpB	NA	NA	NA	NA
WP_014230223.1\|2078527_2080150_-	anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA	NA	NA	NA
WP_014230222.1\|2080421_2081768_+	glycerol-3-phosphate transporter	NA	NA	NA	NA
WP_014230221.1\|2081777_2082845_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	3.9e-08	42.9
WP_038424726.1\|2082849_2083806_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_038424725.1\|2083850_2085395_-\|holin	glucose-methanol-choline oxidoreductase	A0A1V0SI18	Klosneuvirus	6.8e-38	28.2
WP_004104002.1\|2085587_2085842_-	2Fe-2S ferredoxin-like protein	G9IAA2	Pseudomonas_phage	8.2e-26	64.0
WP_004852757.1\|2085841_2086972_-	ribonucleotide-diphosphate reductase subunit beta	G9IAA3	Pseudomonas_phage	7.3e-175	78.9
WP_014839096.1\|2087075_2089361_-	ribonucleoside-diphosphate reductase subunit alpha	I3UMG3	Colwellia_phage	3.5e-285	63.9
WP_014230217.1\|2089705_2090434_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA
WP_004852752.1\|2090619_2093253_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	1.6e-92	30.8
WP_014230216.1\|2093383_2096230_+	two-component system sensor histidine kinase RcsC	A0A1V0SGX0	Hokovirus	3.4e-43	26.3
WP_004103995.1\|2096274_2096925_-	transcriptional regulator RcsB	NA	NA	NA	NA
WP_014230215.1\|2096941_2099602_-	phosphotransferase RcsD	NA	NA	NA	NA
WP_014230214.1\|2100373_2101492_+	porin OmpC	Q1MVN1	Enterobacteria_phage	1.9e-119	60.5
WP_014230213.1\|2101594_2102647_+	FAD:protein FMN transferase ApbE	NA	NA	NA	NA
WP_014230212.1\|2102719_2103784_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	L7Y5F8	Megavirus	1.4e-18	47.2
WP_014230211.1\|2103783_2104434_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA
WP_014230210.1\|2104510_2106154_+	multidrug ABC transporter permease/ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-08	22.6
WP_014230209.1\|2106322_2107759_+	magnesium transporter	NA	NA	NA	NA
WP_014230208.1\|2107721_2108969_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	9.5e-67	44.3
WP_014230207.1\|2109248_2110883_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_014230206.1\|2110927_2111419_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_009653963.1\|2111621_2112728_-	AI-2E family transporter	NA	NA	NA	NA
WP_014230205.1\|2113709_2114207_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_014230204.1\|2114243_2115794_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_014839089.1\|2115812_2117150_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_3

2264152 : 2272547

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014230106.1\|2264152_2265016_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-08	23.4
WP_014230105.1\|2265026_2265800_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.8e-27	37.7
WP_032693715.1\|2266216_2267017_+	CadC family transcriptional regulator	NA	NA	NA	NA
WP_014230103.1\|2267003_2267474_+	hypothetical protein	NA	NA	NA	NA
WP_009654032.1\|2267474_2268368_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	8.8e-14	28.9
WP_025107782.1\|2268612_2269974_-	U32 family peptidase	Q6DW11	Phage_TP	1.6e-200	92.0
WP_014230101.1\|2270292_2271015_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	2.4e-30	32.7
WP_032693716.1\|2271011_2272547_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	2.8e-28	27.6

DBSCAN-SWA_4

3545544 : 3566459

Cronobacter_phage(25.0%)

tail,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004112629.1\|3545544_3546534_+	2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.9e-70	45.7
WP_014229134.1\|3546659_3547100_+	heat shock protein HslJ	NA	NA	NA	NA
WP_004101621.1\|3547096_3547369_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_077255406.1\|3547654_3557989_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	49.0
WP_038424422.1\|3558036_3558651_-\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	5.5e-68	70.1
WP_038423189.1\|3558818_3559553_-	peptidase P60	Q6UAW4	Klebsiella_phage	5.3e-126	83.6
WP_014229131.1\|3559554_3560307_-\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	2.5e-115	76.7
WP_014229130.1\|3560303_3560651_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	5.4e-36	60.9
WP_014229129.1\|3560673_3561783_-\|tail	phage tail tape measure protein	I6PCW3	Cronobacter_phage	5.9e-52	48.5
WP_071881731.1\|3561867_3562113_-	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	6.1e-10	41.2
WP_014229128.1\|3562175_3562487_-	hypothetical protein	I6PDG2	Cronobacter_phage	1.5e-32	62.1
WP_014229127.1\|3562559_3563222_-\|tail	phage tail protein	I6PBN6	Cronobacter_phage	7.0e-77	65.0
WP_004850340.1\|3563341_3563761_-	hypothetical protein	Q6UAS0	Klebsiella_phage	9.4e-35	51.5
WP_038424420.1\|3563816_3564359_-	glycoside hydrolase family 108 protein	A0A0U2I1S0	Escherichia_phage	1.5e-69	66.1
WP_032749344.1\|3564366_3564639_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.2e-16	55.4
WP_009653048.1\|3564628_3565021_-	membrane protein	K7PHB9	Enterobacterial_phage	1.3e-38	66.2
WP_032720808.1\|3565097_3565460_-	hypothetical protein	C6ZR44	Salmonella_phage	7.1e-31	58.3
WP_009653037.1\|3565922_3566459_-	helix-turn-helix transcriptional regulator	K7PKK1	Enterobacteria_phage	5.2e-30	49.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP042547

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3297 : 111376

104

Escherichia_phage(18.52%)

transposase,integrase

attL 48203:48249|attR 60558:60604

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004098871.1\|3297_4275_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.4e-75	59.9
WP_101867698.1\|4232_4421_+	hypothetical protein	NA	NA	NA	NA
WP_004098873.1\|4738_6166_-	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_040118505.1\|6182_6782_-	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_038423659.1\|6817_8407_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	9.7e-173	60.6
WP_009309933.1\|8437_8788_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	9.6e-41	67.2
WP_009309932.1\|8784_9189_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.6e-23	67.5
WP_004098877.1\|9321_10392_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_004098879.1\|10988_12089_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_004098881.1\|12228_14154_+	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
WP_004098883.1\|14131_14680_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_004098885.1\|14681_15047_-	hypothetical protein	NA	NA	NA	NA
WP_004098891.1\|15116_16280_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_004098893.1\|16317_16746_-	heme-binding protein	NA	NA	NA	NA
WP_004098894.1\|17139_18807_+	propanediol/glycerol family dehydratase large subunit	NA	NA	NA	NA
WP_004098897.1\|18820_19411_+	propanediol/glycerol family dehydratase medium subunit	NA	NA	NA	NA
WP_004098899.1\|19407_19839_+	diol dehydratase small subunit	NA	NA	NA	NA
WP_087786203.1\|21459_22154_-\|transposase	IS1-like element IS1N family transposase	A0A0U2RK18	Escherichia_phage	4.4e-130	95.2
WP_040118507.1\|22439_23411_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_040118508.1\|24641_25274_+	hypothetical protein	NA	NA	NA	NA
WP_009310015.1\|26819_28352_+\|transposase	IS3-like element ISKpn38 family transposase	A0A1B1P773	Bacillus_phage	4.1e-51	39.8
WP_004196353.1\|28426_29767_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_040118509.1\|30188_31427_+\|transposase	IS110 family transposase	A0A0U3ULR1	Bacillus_phage	1.9e-11	23.4
WP_032072095.1\|31515_31938_-	nickel resistance OB fold protein NcrY	NA	NA	NA	NA
WP_004196366.1\|32099_33230_-	Ni(II)/Co(II) efflux transporter permease subunit NcrC	NA	NA	NA	NA
WP_004196355.1\|33242_33512_-	nickel-sensing transcriptional repressor NcrB	NA	NA	NA	NA
WP_004196314.1\|33617_34916_-	MFS transporter	NA	NA	NA	NA
WP_004196325.1\|35149_35908_-	hypothetical protein	NA	NA	NA	NA
WP_004196315.1\|35961_36882_-	hypothetical protein	NA	NA	NA	NA
WP_004196359.1\|36944_37316_-	hypothetical protein	NA	NA	NA	NA
WP_008460269.1\|37716_38640_+	chromate resistance protein	NA	NA	NA	NA
WP_008460270.1\|38593_39973_+	chromate efflux transporter	A0A219VHC2	Ochrobactrum_phage	1.6e-27	64.6
WP_004196322.1\|40003_40693_-	hypothetical protein	NA	NA	NA	NA
WP_008460272.1\|40706_41444_-	HupE/UreJ family protein	NA	NA	NA	NA
WP_009651956.1\|41487_41853_-	hypothetical protein	NA	NA	NA	NA
WP_071889528.1\|42103_42325_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	A0A2H4JBG1	uncultured_Caudovirales_phage	1.2e-12	54.2
WP_014386184.1\|43392_43551_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_032426567.1\|43990_44263_+	hypothetical protein	NA	NA	NA	NA
WP_004152758.1\|44259_44610_+	hypothetical protein	NA	NA	NA	NA
WP_020805754.1\|45121_45502_+	hypothetical protein	NA	NA	NA	NA
WP_020805753.1\|45567_45915_+	hypothetical protein	NA	NA	NA	NA
WP_020805755.1\|46002_46233_+	hypothetical protein	NA	NA	NA	NA
WP_020805751.1\|46279_47113_+	SAM-dependent DNA methyltransferase	A0A2K9V411	Faecalibacterium_phage	3.1e-21	34.7
WP_032191440.1\|47201_48125_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	3.6e-172	97.1
48203:48249	attL	NA	NA	NA	NA
WP_047722685.1\|49056_49677_+	serine recombinase	M9Q1K0	Clostridium_phage	2.1e-06	29.3
WP_040118531.1\|49696_49960_+	hypothetical protein	NA	NA	NA	NA
WP_040118542.1\|50060_50990_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.2e-75	55.0
WP_040118530.1\|51781_52477_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	8.6e-25	31.6
WP_040118529.1\|52521_53304_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.9e-53	91.2
WP_040118528.1\|53300_54044_-	hypothetical protein	NA	NA	NA	NA
WP_047722684.1\|54088_54406_-	hypothetical protein	NA	NA	NA	NA
WP_021312767.1\|55021_55252_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_021312768.1\|55248_55665_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001067855.1\|55852_56557_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_040118527.1\|59603_60527_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.6e-172	97.4
WP_040118421.1\|60806_61832_+\|transposase	IS630 family transposase	NA	NA	NA	NA
60558:60604	attR	NA	NA	NA	NA
WP_040118421.1\|62444_63470_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_032640629.1\|63682_63883_+	hypothetical protein	NA	NA	NA	NA
WP_032640631.1\|63886_64324_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_040118421.1\|64376_65402_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_040118526.1\|65450_66035_-	hypothetical protein	NA	NA	NA	NA
WP_001288432.1\|66537_67971_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	7.0e-106	50.6
WP_005012528.1\|68004_69219_-	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_001067855.1\|69693_70398_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_040118523.1\|71365_71632_+	acetolactate synthase 2 small subunit	NA	NA	NA	NA
WP_040118522.1\|71649_72579_+	branched-chain amino acid transaminase	NA	NA	NA	NA
WP_040118521.1\|72642_74493_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_020323225.1\|74498_76043_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_020323228.1\|76289_76805_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_020323230.1\|76806_77085_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_020323222.1\|77130_78534_+	PTS sugar permease component	NA	NA	NA	NA
WP_020323221.1\|78602_80666_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_009654927.1\|80768_81431_+	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_009654928.1\|81476_82490_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_009654926.1\|82499_83141_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_009654924.1\|83156_83423_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_032449369.1\|83556_84750_-	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA
WP_009654921.1\|84967_85597_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_009654925.1\|85598_86603_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_009654922.1\|86723_87626_-	HTH-type transcriptional activator IlvY	NA	NA	NA	NA
WP_020323220.1\|87901_89377_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_004886861.1\|89453_89735_-	peptidylprolyl isomerase C	NA	NA	NA	NA
WP_001067855.1\|90494_91199_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_077255424.1\|91189_91459_+	hypothetical protein	NA	NA	NA	NA
WP_051800691.1\|91401_91833_-	DUF1028 domain-containing protein	NA	NA	NA	NA
WP_040118519.1\|91993_93553_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_040118537.1\|93571_94519_+	ABC transporter permease	NA	NA	NA	NA
WP_040118518.1\|94515_96333_+	dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	4.0e-21	30.6
WP_040118517.1\|96329_97142_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-14	28.8
WP_040118516.1\|97150_97921_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_040118515.1\|97926_98976_+	osmoprotectant NAGGN system M42 family peptidase	NA	NA	NA	NA
WP_040118536.1\|99024_99306_-	DUF1496 domain-containing protein	NA	NA	NA	NA
WP_109213786.1\|99235_99637_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|99642_100347_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001277466.1\|100487_100853_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|100870_102556_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000732275.1\|103047_103323_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294654.1\|103338_103719_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|103790_104246_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_020803817.1\|105145_106228_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001189111.1\|106767_108276_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	3.6e-44	31.8
WP_052953619.1\|108584_108995_+	hypothetical protein	NA	NA	NA	NA
WP_040118512.1\|109881_110160_+	hypothetical protein	NA	NA	NA	NA
WP_020805503.1\|110422_111376_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.6e-74	56.5

DBSCAN-SWA_2

121885 : 130215

Faecalibacterium_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040118454.1\|121885_122587_+	methylase	A0A2K9VH43	Faecalibacterium_phage	3.4e-21	33.8
WP_020314641.1\|122586_122808_+	hypothetical protein	NA	NA	NA	NA
WP_040118455.1\|122853_123264_+	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_040118456.1\|123311_124079_+	hypothetical protein	NA	NA	NA	NA
WP_040118457.1\|124503_124932_+	antirestriction protein YubI	A9J566	Pseudomonas_phage	3.4e-08	30.5
WP_040118458.1\|124978_125485_+	antirestriction protein	G9FHQ1	Rhodococcus_virus	5.3e-08	31.9
WP_000761848.1\|125525_125717_+	hypothetical protein	NA	NA	NA	NA
WP_040118459.1\|125917_126181_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.4e-14	55.3
WP_040118460.1\|126204_126525_+	hypothetical protein	NA	NA	NA	NA
WP_074194703.1\|127171_127261_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_040118461.1\|127291_127849_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.2e-48	74.4
WP_040118462.1\|127897_128146_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_040118463.1\|128214_130215_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.1e-23	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP042548

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP042548_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP042548_1

16584-16711

Orphan

Consensus_repeat	Method
CCGGCTCTTTCTGTATTGTGCAATACAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP042548_1

>merge|NZ_CP042548|1|16584-16711|PILER-CR
CGCACTTTGTGTATTGTGCAATACATCTTTTTTCACCTGCTCAGACTTCGCGGGTTTTTCTGTATTGTGCAATACAGGTTTCTTCTGTTGCTCACTGGCTCCGGCTGATTCTGTATTGTGCAATACAG

>NZ_CP042548|1|1|16584-16711|PILER-CR
CGCACTTTGTGTATTGTGCAATACATCTTTTTTCACCT	GCTCAGACTTCGC
GGGTTTTTCTGTATTGTGCAATACAGGTTTCTTCTGTT	GCTCACTGGCTCCGGCTGATTCT
GTATTGTGCAATACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP042548.1\|WP_032493181.1\|15753_16470_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_001642230.1\|17583_17802_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_032493182.1\|14729_14912_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_000101920.1\|26077_27211_-\|TrbI/VirB10-family-protein	unknown	unknown	gnl\|CDD\|319755
NZ_CP042548.1\|WP_032493179.1\|17801_19334_+\|type-IV-secretion-system-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|238547
NZ_CP042548.1\|WP_000715148.1\|24501_25029_-\|phospholipase-D-family-protein	unknown	unknown	gnl\|CDD\|197267
NZ_CP042548.1\|WP_024562318.1\|9941_10472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_024562316.1\|11645_12437_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376266
NZ_CP042548.1\|WP_024562315.1\|12605_12875_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_032493183.1\|14448_14655_+\|DUF905-domain-containing-protein	unknown	unknown	gnl\|CDD\|368702
NZ_CP042548.1\|WP_032493186.1\|13171_13669_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|368446
NZ_CP042548.1\|WP_032277100.1\|14970_15174_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_099156418.1\|15382_15676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_024561907.1\|19338_22557_+\|conjugative-relaxase	unknown	unknown	gnl\|CDD\|378042
NZ_CP042548.1\|WP_015060066.1\|12916_13117_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_000971716.1\|22553_23219_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_000758230.1\|27210_28098_-\|type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|274296
NZ_CP042548.1\|WP_001076634.1\|25025_26027_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|274301
NZ_CP042548.1\|WP_024561906.1\|23211_23574_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP042548.1\|WP_001208352.1\|28108_28804_-\|type-IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|319761

Protein	Function_ID	Function_description	E-value
NZ_CP042548.1\|WP_032493183.1\|14448_14655_+\|DUF905-domain-containing-protein	gnl\|CDD\|368702	pfam06006, DUF905, Bacterial protein of unknown function (DUF905). This family consists of several short hypothetical Enterobacteria proteins of unknown function. Structural analysis of the surface features of the protein YvyC has revealed a single cluster of highly conserved residues on the surface. Additionally, these residues fall into two groups which lie within the two largest of the three cavities identified over the surface. The conclusion from this is that these two cavities with, Leu 58, Glu 75, Ile 82, and Glu 83 and Pro 86, conserved, are likely to be important for the molecular function and reflect the cavities found on the surface of the FlaG proteins in pfam03646.	0.00463241
NZ_CP042548.1\|WP_032493186.1\|13171_13669_+\|transcriptional-regulator	gnl\|CDD\|368446	pfam05443, ROS_MUCR, ROS/MUCR transcriptional regulator protein. This family consists of several ROS/MUCR transcriptional regulator proteins. The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti. This gene encodes a 15.5-kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid and is necessary for succinoglycan production. Sinorhizobium meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of alfalfa nodules. MucR from Sinorhizobium meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan.	4.90447e-14
NZ_CP042548.1\|WP_000101920.1\|26077_27211_-\|TrbI/VirB10-family-protein	gnl\|CDD\|319755	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS). This family contains VirB10, a component of the type IV secretion system (T4SS), including homologs TrbI, TraF, TrwE and TraL. T4S system is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. It forms a large multiprotein complex consisting of 12 proteins termed VirB1-11 and VirD4. VirB10, interacts with VirB7 and VirB9, forming the membrane-spanning 'core complex' (CC), around which all other components assemble. The CC is inserted in both, the outer and inner membranes, playing a fundamental role as a scaffold for the rest of the T4SS components and actively participating in T4S substrate transfer through the bacterial envelope via conformational changes regulating channel opening and closing. TrwE in R33 plasmid has been shown to be anchored to the inner membrane and its C-terminal is necessary for conjugation; the transmembrane domains of TrwB and TrwE are involved in TrwB-TrwE interactions. TraF protein of the RP4 plasmid is involved in circularization of pilin subunits of P-type pili. In gonococcal genetic island (GGI) of Neisseria gonorrhoeae, T4SS encodes TrbI and circularization occurs via a covalent intermediate between the C terminus of putative pilin protein TraA and TrbI.	1.11258e-69
NZ_CP042548.1\|WP_032493179.1\|17801_19334_+\|type-IV-secretion-system-DNA-binding-domain-containing-protein	gnl\|CDD\|238547	cd01127, TrwB, Bacterial conjugation protein TrwB, ATP binding domain. TrwB is a homohexamer encoded by conjugative plasmids in Gram-negative bacteria. TrwB also has an all alpha domain which has been hypothesized to be responsible for DNA binding. TrwB is a component of Type IV secretion and is responsible for the horizontal transfer of DNA between bacteria.	1.07388e-156
NZ_CP042548.1\|WP_000715148.1\|24501_25029_-\|phospholipase-D-family-protein	gnl\|CDD\|197267	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Catalytic domain of an EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Nuc is an endonuclease cleaving both single- and double-stranded DNA. It is the smallest known member of the phospholipase D (PLD, EC 3.1.4.4) superfamily that includes a diverse group of proteins with various catalytic functions. Most members of this superfamily have two copies of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain and both are required for catalytic activity. However, Nuc only has one copy of the HKD motif per subunit but form a functionally active homodimer (it is most likely also active in solution as a multimeric protein), which has a single active site at the dimer interface containing the HKD motifs from both subunits. Due to the lack of a distinct domain for DNA binding, Nuc cuts DNA non-specifically. It utilizes a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit.	1.08418e-70
NZ_CP042548.1\|WP_024561907.1\|19338_22557_+\|conjugative-relaxase	gnl\|CDD\|378042	pfam08751, TrwC, TrwC relaxase. Relaxases are DNA strand transferases which function during the conjugative cell to cell DNA transfer. TrwC binds to the origin of transfer (oriT) and melts the double helix.	3.167e-97
NZ_CP042548.1\|WP_001076634.1\|25025_26027_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|274301	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11. The VirB11 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for DNA transfer. VirB11 is believed to be an ATPase. VirB11 is a homolog of the P-like conjugation system TrbB protein and the Flp pilus sytem protein TadA.	6.00465e-76
NZ_CP042548.1\|WP_000758230.1\|27210_28098_-\|type-IV-secretion-system-protein	gnl\|CDD\|274296	TIGR02781, Protein_virB9, P-type conjugative transfer protein VirB9. The VirB9 protein is found in the vir locus of Agrobacterium Ti plasmids where it is involved in a type IV secretion system . VirB9 is a homolog of the F-type conjugative transfer system TraK protein (which is believed to be an outer membrane pore-forming secretin, TIGR02756) as well as the Ti system TrbG protein. [Cellular processes, Conjugation].	2.17722e-56
NZ_CP042548.1\|WP_024562316.1\|11645_12437_+\|hypothetical-protein	gnl\|CDD\|376266	pfam18847, LPD29, Large polyvalent protein associated domain 29. This is an alpha and beta fold domain with conserved polar residues that is found in polyvalent proteins of conjugative elements.	3.26148e-30
NZ_CP042548.1\|WP_001208352.1\|28108_28804_-\|type-IV-secretion-system-protein	gnl\|CDD\|319761	cd16424, VirB8, periplasmic domain of VirB8 protein. This family contains the periplasmic domain of VirB8 protein which is an essential assembly factor of type IV secretion system (T4SS) channel proteins that are highly diverse in function relative to other bacterial secretion systems. T4SS proteins are important virulence factors for many Gram-negative pathogens, such as Agrobacterium, Brucella, Legionella, and Helicobacter. VirB8 is a bacterial virulence protein with cytoplasmic, transmembrane, and periplasmic regions. It is thought that VirB8 is a primary constituent of a DNA transporter. It is a crucial structural and functional component of the T4SS, with interactions between VirB8 and many other T4SS proteins, including VirB10, VirB9, VirB1, VirB4, and VirB11, as well as with itself.	4.19103e-48

>NZ_CP042548.1|WP_032493181.1|15753_16470_-|hypothetical-protein
MKVAVINYSGSVGKTLVSTYLLAPRLKDAKFFAVETINQSASDLGIENVTSFKGDDFSRLIEDVVFEDAAIIDIGASNVEPFLMAMSRFDGGANEFDMYFIPVTPEDKAIKESMKTAHTLSKAGVDNKKIIFVPNRVNPGDDVENVFSPIFDFVKQTKVGRINKNSAIYNSEVYEYLAHHKISFETLTAEDAEEFKARAKASTDADERRKMARRYTYMKQAIPVKSNLDKTFSLLIGD
>NZ_CP042548.1|WP_099156418.1|15382_15676_-|hypothetical-protein
MKQVKVEQADMLQQLGELKSALELTADDSRAEIIGSLRDIQAAMKEENKARSDFLTRWQSLQHNNASTIVNRVVIMTAVCSIVGAAIGAALTLLILK
>NZ_CP042548.1|WP_032277100.1|14970_15174_-|hypothetical-protein
MGKQPYSPNEFFQLLLIRNWQQWEKEKAALGTCQHCGKSKAGGGCGGEFQKETYQCWLAQDANALNL
>NZ_CP042548.1|WP_032493182.1|14729_14912_+|hypothetical-protein
MTKITTPSQLKAELESQKTYLLEACLMAFNQLPNQRTKGAFPSTYALAAKIDYLLQQEKK
>NZ_CP042548.1|WP_032493183.1|14448_14655_+|DUF905-domain-containing-protein
MKQHIAAIIREYNTPTITVEVANTDRYDSEQIEIRQVVDGRLVWRAWDYETGFENDLHRELAYCHIPA
>NZ_CP042548.1|WP_032493186.1|13171_13669_+|transcriptional-regulator
MADHDDAPEKIKCLECGKEFSFLAPHLSKAHQMNARQYRERWGIPLHRPLASAGHSRQCRENVLRRIRRGEIRPADQLALMAEGRKNAPERATSTRLHKVAAANVARVHQIWKHSPVVKVVPDTLRDEAVQRMTARKVTGEKVKDIAADLNLSVGCLYKWVASAK
>NZ_CP042548.1|WP_015060066.1|12916_13117_+|hypothetical-protein
MEKGKLAQQQGFDLELQILKSQRGYYIGTATSEGYPVSRESAEYFPDSSTAQQALTDNRWTQREDC
>NZ_CP042548.1|WP_024562315.1|12605_12875_+|hypothetical-protein
MNYLIIIPIALILAAAALALPWFMVRQGYREQVQLGGACTTVLGLAASTGVFSYADNMPLALLYGSASVVSFLYALDCFLPLYLSRKSH
>NZ_CP042548.1|WP_024562316.1|11645_12437_+|hypothetical-protein
MTTLTVGQCLTSFKNEYVVSAVNLADGKISYTILGLNAPTCAPLLETSLRFYQVIDKTLPLDELRARRQVVQSVTDQREARHQAKEDARQLANERASADPENAGLLTTATESNTTKLAAKNIRILLKKHFPGVKFSVRMRDYNALYVSWTDGPTKEAVEAITDKFEEGSVNSMEDIYEYNITGFHRVYGGVKYLFCSRDLTDALIAESIELLRKEYGETTIPADVTLEAYKSGALAGRGHDCFTWGLAAQIRINAGKVDKSSR
>NZ_CP042548.1|WP_024562318.1|9941_10472_+|hypothetical-protein
MAFDFKKEDAAKYGREVYRAFRSKGNHRWDTCVFVNESGAYSAVFRHSFRKKVIEDGKEIRRNVIDDEIVVAAPDAGSFTRAKFPQLADAKELKQSGFFARLRFLAEAAAYREAWPGHDGGVVLIWEGKAYGWKNCLRDAGCERPGAIAIDTDGHVFIAEGGNDYDGAKCWVAMPC
>NZ_CP042548.1|WP_001642230.1|17583_17802_+|hypothetical-protein
MSAFSSELKGLVKQLSQLKLPPPGQMMLHESLAIETVILLRSMATPANMKSAWGELERNGYKVWESKQERKE
>NZ_CP042548.1|WP_032493179.1|17801_19334_+|type-IV-secretion-system-DNA-binding-domain-containing-protein
MTEQERGLIFLCSLLGPIPFVWFITAKFVYGINSETAHYLVPYLLKNTFNLWPLWVAIIAGAVIGLCGFIGFIIYDKGRVYKGPRFKRVLRGTKLVRASSLAEKTKERDHKQLTVAGVPVPTEYETLHFSIGGATGTGKSTIIKEAIYSSLKRGTDKRIVLDPNGEYVETFYRPGDVILSPYDKRSPGWSMFNEIRDDFDYDLYAVSIIQESKERSAEEWYRYGRLIYREVSKKLLTLKRSPTMEEVMHWCTIVENEKLKEFVKGTPAEALFIKGAERATGSARFVLGDKLAPHLKMPAGDFSLRDWLEDDKPGTLFITWQEQMKKSLNPLISCWLDIMFSSLLGMGKRDQRTLFFIDELESLEYLPNLQDLLTKGRKSGASVWAGYQTYSQLIERYGINIAETLLGSMRSGIVMGSSRLGKETLEQMSRALGEIEGEVEHKQGNPFQAGIGNRPRIETRTVRAVTPTEISELKNLTGYVYFPGDLPVGKFKTKHVQYTRKNPVPGIIMR
>NZ_CP042548.1|WP_024561907.1|19338_22557_+|conjugative-relaxase
MLDITTITRIDIASVVGYYADAKDDYYSKDSSFTAWHGQGAEALGLSGEVSSQRFKELLVGEIDPFTQMKRSSGDATKERLGYDLTFSAPKGVSMQALIHGDKAIIAAHEKAVAAAVQEAEKLAQARTTHAGKTITQNTGNLVVASFRHETSRALDPELHTHAFVMNMTQRGDGQWRALKNDELMRAKMHLGDVYKQELALELTKAGYELRYNNKNNTFDMAHFTDEQIRGFSRRSAQIEEGLAAMGLTRETADAQTKSRVSMATRDKKTDDYSREDIHKEWVNRANELGIDFNDLSWAGKGKDGPQTSMNTVPNFTSPEVKADRAIQFALKSLSERDASFDQSRLLAVANKKAIGQASKQDIEAAYYRAVAKGAIIEGEARYTTTTDQRSKDAPPLPAMTKAEWQAQLTDKKGMNNDQAKALVAEGIKSGRLKKTSHRVTTVEGIRVEKAVLNIEARGRGKVIAALTSEQVTAQLVGKTLKAEQQKSVVDICTTTDRFVAAHGFAGTGKSYMTMSAKAVLESQGFNVTALAPYGTQKKSLEDEGMPARTVAAFVKAKDKKIDEKSVVFIDEAGVIPARQMKVLMETIEKAGARAVFLGDTSQTKAVEAGKPFEQLISAGMQTSYMKDIQRQKNDVLLEAVKLAAEGHISGSLARLSNISAEKDQDKRLEAVANRWLSFSPEQREGTLIISGTNESRVILNSQIREALQLQGKGVEVNFLERVDSTQAERRDSKYYQVGQIIIPEKDYKNGLQRGESYRVLDTGPGNLLTVAGSDGQKISFSPRTHKNLSVYTSVAAELAVGDKVMVTRNDKTLDVANGDRFTVTGTTEKGTFTLTNAKGREIELDQKQAAYLSYAYATTVHKAQGLTCDRVLFNIDTRSLTTSKDVFYVGISRARHEVEIFTDDKKRLLSSASRNSPKTTASEIDRFLGMEERYKDVNRSYGHSDGQQEKSYGHDAGHQTEEKENTMKNATEAAHDGPDTSGTENTSQDLRQREQEEVNAAIRYEQRQEATPEMEANPYHDYERYADEGPDYGDMQDYSTYEEYERARDVELPQHEHENHQHDHDKEGYGL
>NZ_CP042548.1|WP_000971716.1|22553_23219_+|hypothetical-protein
MMFWNRNKKEKAAAGNEKNRFDHLLSVAEKLPVKALPDLIRAIVRPVQSDFLLAVAEEGTDARPDMTPQEFFFEGLIQVQSYEKMKEGELDGADYPLSLASEMVLPWPWSLTRYIDNVSHIGTHKGRPWKQDKINHYVDLWLPWRIGFVRGGNHSITAGILAGEGTVIPDHVYDMSYLFELVRTDGNHWFVDGQKVEAVKSGRSAAVFEIGRLLTEGAKNG
>NZ_CP042548.1|WP_024561906.1|23211_23574_+|hypothetical-protein
MGEQITNAEWEKISPDNFETASLLRAVDAIDDLRGDFNDGEYSAPPQIRTDLLRLHEIAMAVINEGSRSRVSALFELASDLDEQISHLVNRLDEVQDTLSQLMELYPESLYYDDIEGDEE
>NZ_CP042548.1|WP_000715148.1|24501_25029_-|phospholipase-D-family-protein
MKKGAIIFLTGVLAFSSLPSIAADSPSVQVGFSPEGSAQTLVIGAIDSAQSSIRMMAYSFTAMDIMQALVKAKNRGVDVKIVIDERGNRNDVSHRAMKYIVKNEIPLRVDSDFPIQHDKVMIIDERSVQTGSFNYTKAAESKNSENAVVIWNMPQLAKPYLEHWEDRWNRGEDYK
>NZ_CP042548.1|WP_001076634.1|25025_26027_-|ATP-binding-cassette-domain-containing-protein
MNQSSAYYQLGPLREYFEDPGVFEVRINRYNEVVCDTFEGRKIIQNDSITGAFIDNLTAALTSANNVSRQMINDVVLPDGSRGIICLPPAVIDNTAAIAFRKNIALDKDLATLSQEGIFEFCREIDSHKRELDDDDLLLKELYRAKRREEFLLTAVRKKRTVVVVGETGSGKTVLTRALLKAISPQERVIIMEDAHEVEATHLEEAVYMKYGGKDKPGLATPTQCLKACMRLTPDRIFMTELRDDAAWDYLQALNTGHPGGLTSTHANSAMDAFTRIGLMVKATEVGRMLDISDIMRLLHSTIDVVVFMAKRKIREIYYSPEYKYECMNGGIK
>NZ_CP042548.1|WP_000101920.1|26077_27211_-|TrbI/VirB10-family-protein
MARKVDIDSELDNNNSFNDERGGMPAQKRRTAPGLKAFIAILAIIAMCFVGVTIYTHTRKAPDTAKADSGNKNDGVSSLPNYQFNTNPNVGGAAAPDANQKAMQDKARAEYEASHSNTGRASNGKKQLTPEEVAMQRRLDGDLSGEQGGSQTPAKKEQQSDEGSEGSSALAKELTPARLKGSRAGVMQNMSMTIAKGTMIPCGTSTELDTTVPGMVSCRVTRDVYSLDGLVKLIDKGAFVTGQMNGGLKNGQARVFVLWERVVNPDGTFVNLDSAGTNSLGSSGVPGQVDSHFWDRFEGAVFISVLSDALQAGVAAAQNGNNIQFSNTQNNSQELASEALRATINIPPTLYDQQGDAISIYVVRDLDFSDIYSLADN
>NZ_CP042548.1|WP_000758230.1|27210_28098_-|type-IV-secretion-system-protein
MKKVVLSAVIAMALAGTTFNAAALQAPKSSPYDFRIKTVVYNPVDVVRIDAVAGLFTHIVVSPDESYITHAFGDSAGWIFSHKLNHYFVKPKTEMSDTNLTIVTDKRSYNIVLHYIGETTTKNADGTETKSFIKTPWSMKQATLQLTYEYPFDEQKKASSVAEKKRLTEKLRESAFAGPKNYQYEMSDEPEMADIQPIHVWDNYRFTRFEFPENADLPQVYYISSSGKETLPNCRPVGEHNNILECQNVAKEWRVRLGWTKVVGIKNINYVPSAGAISTGTASPDVRRVQKGGDN
>NZ_CP042548.1|WP_001208352.1|28108_28804_-|type-IV-secretion-system-protein
MREKKKGLTKEAIKEFNESRKGLEVDVMNEVLSSRRTAWIVAAVASVVAVVAIGNATFVNYRYSQPIPPFLLTLNPSNHEVSQVKLTRDDATYGDEIDKYFLTQYVIHRESYDFYSLQVDYDAVGLMSTPNVAEAYLSRFKGKQGIDKVLGDSETTRVSINSTILDREHGVATIRFTTVRRSRSNNFDDPPKRWIAILGYEYKSLAMNASQRYINPLGFRVTSYRVNPESN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP015078	Escherichia coli strain Ecol_448 plasmid pEC448_OXA163, complete sequence	32887-32909	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP034403	Escherichia coli strain CRE10 plasmid pCRE10.4, complete sequence	34726-34748	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_EF219134	Klebsiella pneumoniae isolate JIE137 plasmid pJIE137, complete sequence	51055-51077	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP022277	Citrobacter freundii strain 18-1 plasmid pD18-1, complete sequence	20150-20172	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP050010	Citrobacter sp. Y3 plasmid unnamed1, complete sequence	32455-32477	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP027617	Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed5, complete sequence	20308-20330	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP024879	Klebsiella pneumoniae strain NH25 plasmid pNH25.5, complete sequence	34833-34855	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP043856	Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid pIMPIncN3_52kb, complete sequence	276-298	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP026184	Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-af73, complete sequence	39010-39032	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP011646	Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence	33130-33152	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP040826	Enterobacter cloacae strain NH77 plasmid pEcloNH77, complete sequence	29824-29846	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP043516	Enterobacter kobei strain EB_P8_L5_01.19 plasmid pIMPIncN3_57kb, complete sequence	44764-44786	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	MN583554	Escherichia coli strain M17224 plasmid p17511_70, complete sequence	39767-39789	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP027125	Escherichia coli strain AR_0374 plasmid unnamed3	3381-3403	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP026279	Klebsiella oxytoca strain KONIH2 plasmid pKOR-b08d, complete sequence	481-503	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_KX784503	Citrobacter freundii strain 17285 plasmid p17285-IMP, complete sequence	10869-10891	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_KX784502	Klebsiella oxytoca strain 7121 plasmid p7121-IMP, complete sequence	10854-10876	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_KT148595	Klebsiella pneumoniae subsp. pneumoniae strain GN1006 plasmid pKPC-SMH, complete sequence	31495-31517	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_KT345947	Klebsiella pneumoniae strain 2013050801 plasmid p0801-IMP, complete sequence	10976-10998	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP010378	Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-59.134kb, complete sequence	51379-51401	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	MN967025	Klebsiella pneumoniae strain KP2611 plasmid pKP2611-N, complete sequence	11482-11504	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	MK368725	Escherichia coli strain JN24 plasmid pJN24NDM1, complete sequence	10989-11011	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NC_019163	Klebsiella pneumoniae plasmid pTR4, complete sequence	10987-11009	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP026274	Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence	139357-139379	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP029112	Escherichia coli strain AR436 plasmid unnamed3, complete sequence	52046-52068	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP026205	Escherichia coli strain ECONIH5 plasmid pKPC-e3ee, complete sequence	113-135	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_LT985223	Escherichia coli strain 711 plasmid RCS25_p, complete sequence	3799-3821	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP034398	Escherichia coli strain CRE1 plasmid pCRE1.4, complete sequence	8450-8472	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP042548	Klebsiella michiganensis strain C52 plasmid pC52_003, complete sequence	16661-16683	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NC_015872	Escherichia coli plasmid p271A, complete sequence	20552-20574	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP027137	Escherichia coli strain AR_0369 plasmid unnamed1, complete sequence	47670-47692	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP026232	Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd, complete sequence	47772-47794	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP019907	Escherichia coli strain MDR_56 plasmid unnamed2, complete sequence	18732-18754	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	186437-186459	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NC_024954	Escherichia coli strain ECS01 plasmid pNDM-ECS01, complete sequence	10989-11011	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP010382	Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-53.129kb, complete sequence	52783-52805	0	1.0
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	NZ_CP035471	Escherichia coli strain U12A plasmid pU12A_D, complete sequence	8523-8545	2	0.913
NZ_CP042548_1	1.2\|16673\|23\|NZ_CP042548\|PILER-CR	16673-16695	23	KX863569	Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence	11643-11665	2	0.913

1. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP015078 (Escherichia coli strain Ecol_448 plasmid pEC448_OXA163, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

2. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP034403 (Escherichia coli strain CRE10 plasmid pCRE10.4, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

3. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_EF219134 (Klebsiella pneumoniae isolate JIE137 plasmid pJIE137, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

4. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP022277 (Citrobacter freundii strain 18-1 plasmid pD18-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

5. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP050010 (Citrobacter sp. Y3 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

6. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP027617 (Klebsiella pneumoniae subsp. ozaenae strain AR_0096 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

7. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP024879 (Klebsiella pneumoniae strain NH25 plasmid pNH25.5, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

8. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP043856 (Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid pIMPIncN3_52kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

9. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP026184 (Klebsiella pneumoniae strain KPNIH49 plasmid pKPN-af73, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

10. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP011646 (Klebsiella pneumoniae strain CAV1596 plasmid pKPC_CAV1596-97, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

11. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP040826 (Enterobacter cloacae strain NH77 plasmid pEcloNH77, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

12. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP043516 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid pIMPIncN3_57kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

13. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to MN583554 (Escherichia coli strain M17224 plasmid p17511_70, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

14. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP027125 (Escherichia coli strain AR_0374 plasmid unnamed3) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

15. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP026279 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-b08d, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

16. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_KX784503 (Citrobacter freundii strain 17285 plasmid p17285-IMP, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

17. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_KX784502 (Klebsiella oxytoca strain 7121 plasmid p7121-IMP, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

18. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_KT148595 (Klebsiella pneumoniae subsp. pneumoniae strain GN1006 plasmid pKPC-SMH, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

19. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_KT345947 (Klebsiella pneumoniae strain 2013050801 plasmid p0801-IMP, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

20. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP010378 (Enterobacter hormaechei subsp. hormaechei strain 34983 plasmid p34983-59.134kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

21. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to MN967025 (Klebsiella pneumoniae strain KP2611 plasmid pKP2611-N, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

22. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to MK368725 (Escherichia coli strain JN24 plasmid pJN24NDM1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

23. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NC_019163 (Klebsiella pneumoniae plasmid pTR4, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

24. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP026274 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

25. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP029112 (Escherichia coli strain AR436 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

26. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP026205 (Escherichia coli strain ECONIH5 plasmid pKPC-e3ee, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

27. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_LT985223 (Escherichia coli strain 711 plasmid RCS25_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

28. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP034398 (Escherichia coli strain CRE1 plasmid pCRE1.4, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

29. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP042548 (Klebsiella michiganensis strain C52 plasmid pC52_003, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

30. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NC_015872 (Escherichia coli plasmid p271A, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

31. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP027137 (Escherichia coli strain AR_0369 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

32. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP026232 (Citrobacter freundii complex sp. CFNIH4 plasmid pKPC-c9fd, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

33. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP019907 (Escherichia coli strain MDR_56 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

34. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

35. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NC_024954 (Escherichia coli strain ECS01 plasmid pNDM-ECS01, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

36. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP010382 (Enterobacter hormaechei subsp. steigerwaltii strain 34998 plasmid p34998-53.129kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtttcttctgttgctcactggct	CRISPR spacer
gtttcttctgttgctcactggct	Protospacer
***********************

37. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to NZ_CP035471 (Escherichia coli strain U12A plasmid pU12A_D, complete sequence) position: , mismatch: 2, identity: 0.913

gtttcttctgttgctcactggct	CRISPR spacer
ttttcttttgttgctcactggct	Protospacer
 ******.***************

38. spacer 1.2|16673|23|NZ_CP042548|PILER-CR matches to KX863569 (Uncultured bacterium plasmid pTRE-131 clone TRE-131, complete sequence) position: , mismatch: 2, identity: 0.913

gtttcttctgttgctcactggct	CRISPR spacer
ttttcttttgttgctcactggct	Protospacer
 ******.***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2478 : 51787

Salmonella_phage(27.27%)

integrase,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032493169.1\|2478_3264_-\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_012766294.1\|3671_4313_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000608644.1\|5609_6872_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_032493168.1\|7124_8000_+	class A extended-spectrum beta-lactamase CTX-M-62	A0A1B0VBP7	Salmonella_phage	4.6e-124	81.7
WP_064754192.1\|8044_8377_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_032493167.1\|9207_9630_+	ArdB-like protein	NA	NA	NA	NA
WP_024562319.1\|9746_9938_+	hypothetical protein	A0A2I7QQE5	Vibrio_phage	3.8e-07	52.4
WP_024562318.1\|9941_10472_+	hypothetical protein	NA	NA	NA	NA
WP_024562316.1\|11645_12437_+	hypothetical protein	A0A2H4PB09	Aphanizomenon_phage	1.2e-09	41.7
WP_024562315.1\|12605_12875_+	hypothetical protein	NA	NA	NA	NA
WP_015060066.1\|12916_13117_+	hypothetical protein	NA	NA	NA	NA
WP_032493186.1\|13171_13669_+	transcriptional regulator	NA	NA	NA	NA
WP_032493183.1\|14448_14655_+	DUF905 domain-containing protein	A0A192Y879	Salmonella_phage	6.9e-07	45.6
WP_032493182.1\|14729_14912_+	hypothetical protein	NA	NA	NA	NA
WP_032277100.1\|14970_15174_-	hypothetical protein	NA	NA	NA	NA
WP_099156418.1\|15382_15676_-	hypothetical protein	NA	NA	NA	NA
WP_032493181.1\|15753_16470_-	hypothetical protein	NA	NA	NA	NA
WP_029697170.1\|16478_16910_-	hypothetical protein	NA	NA	NA	NA
WP_001642230.1\|17583_17802_+	hypothetical protein	NA	NA	NA	NA
WP_032493179.1\|17801_19334_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_024561907.1\|19338_22557_+	conjugative relaxase	A0A2R8FDQ9	Cedratvirus	2.4e-05	30.5
WP_000971716.1\|22553_23219_+	hypothetical protein	NA	NA	NA	NA
WP_024561906.1\|23211_23574_+	hypothetical protein	NA	NA	NA	NA
WP_000715148.1\|24501_25029_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.1e-24	38.7
WP_001076634.1\|25025_26027_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_000101920.1\|26077_27211_-	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_000758230.1\|27210_28098_-	type IV secretion system protein	NA	NA	NA	NA
WP_001208352.1\|28108_28804_-	type IV secretion system protein	NA	NA	NA	NA
WP_032493177.1\|28814_28946_-	hypothetical protein	NA	NA	NA	NA
WP_014014948.1\|29022_30060_-	type IV secretion system protein	NA	NA	NA	NA
WP_000858958.1\|30076_30319_-	EexN family lipoprotein	NA	NA	NA	NA
WP_014014949.1\|30328_31030_-	conjugal transfer protein TraC	NA	NA	NA	NA
WP_032493176.1\|31045_33619_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_000462629.1\|33619_33937_-	hypothetical protein	NA	NA	NA	NA
WP_015060075.1\|33976_34273_-	conjugal transfer protein TraM	NA	NA	NA	NA
WP_015060076.1\|34281_34560_-	hypothetical protein	NA	NA	NA	NA
WP_024562119.1\|34519_35302_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_000960955.1\|35401_35719_+	H-NS histone family protein	NA	NA	NA	NA
WP_024562120.1\|35722_36073_+	hypothetical protein	NA	NA	NA	NA
WP_040115112.1\|36183_36408_+	hypothetical protein	NA	NA	NA	NA
WP_099156415.1\|36432_36720_+	hypothetical protein	NA	NA	NA	NA
WP_024562121.1\|37004_37190_+	ribbon-helix-helix domain-containing protein	A0A0A7RUX5	Clostridium_phage	2.6e-05	57.8
WP_000275218.1\|37186_37795_-	resolvase	NA	NA	NA	NA
WP_151641815.1\|37948_38146_-	resolvase	NA	NA	NA	NA
WP_000935452.1\|38077_39382_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001067834.1\|39428_40133_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000219391.1\|40254_41160_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|41156_42395_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|42394_42979_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001336397.1\|42924_43281_+	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|43471_44236_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_024143553.1\|44264_44447_+	hypothetical protein	NA	NA	NA	NA
WP_000130000.1\|44462_44768_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000184001.1\|44778_45984_-	chromate efflux transporter	NA	NA	NA	NA
WP_000376616.1\|46139_46343_-	hypothetical protein	NA	NA	NA	NA
WP_001993321.1\|46361_46541_+	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|46470_47310_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_012695489.1\|47800_48445_+	quinolone resistance pentapeptide repeat protein QnrB2	NA	NA	NA	NA
WP_003833285.1\|48486_48939_-	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
WP_000050481.1\|50245_51787_-\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP042546

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1319 : 132757

119

Escherichia_phage(25.58%)

integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032752117.1\|1319_2060_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	7.0e-25	58.6
WP_077254524.1\|2116_2443_+	hypothetical protein	NA	NA	NA	NA
WP_151641814.1\|2524_3907_-	hypothetical protein	E5G6M2	Salmonella_phage	3.8e-16	25.6
WP_089617520.1\|3927_5135_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	5.7e-101	62.9
WP_040118422.1\|5210_5567_-	hypothetical protein	NA	NA	NA	NA
WP_040118423.1\|6838_7582_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.7e-51	89.3
WP_040118424.1\|7623_7953_-	hypothetical protein	NA	NA	NA	NA
WP_040118425.1\|8261_8930_-	hypothetical protein	NA	NA	NA	NA
WP_032752086.1\|9018_9291_-	hypothetical protein	NA	NA	NA	NA
WP_007374408.1\|10168_11077_+	HNH endonuclease	NA	NA	NA	NA
WP_032752126.1\|11484_11835_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	7.9e-19	53.3
WP_007374411.1\|11980_12412_-	silver-binding protein SilE	NA	NA	NA	NA
WP_040118426.1\|12657_14133_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_000697968.1\|14125_14806_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.7e-31	36.0
WP_000475503.1\|14995_16381_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|16409_16763_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_023602553.1\|16876_18169_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_000574021.1\|18179_21326_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	8.0e-62	22.6
WP_002436620.1\|21412_21853_+	hypothetical protein	NA	NA	NA	NA
WP_142132150.1\|21950_24422_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	1.7e-83	35.1
WP_000843497.1\|24462_24660_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004118669.1\|24693_25431_-	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_001023257.1\|25719_26169_-	copper resistance protein	NA	NA	NA	NA
WP_040118428.1\|26403_28221_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_001242438.1\|28220_29117_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000025662.1\|29156_29537_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_004118344.1\|29541_30471_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_001188930.1\|30525_31206_+	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_002436614.1\|31202_32603_+	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	2.4e-18	26.6
WP_004118347.1\|32818_33253_+	hypothetical protein	NA	NA	NA	NA
WP_009654306.1\|33631_33751_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004118349.1\|33716_33896_-	antitoxin	NA	NA	NA	NA
WP_009310051.1\|34209_34473_+	hypothetical protein	NA	NA	NA	NA
WP_009310052.1\|34469_35036_+	hypothetical protein	NA	NA	NA	NA
WP_004213594.1\|35066_35561_+	hypothetical protein	NA	NA	NA	NA
WP_004150739.1\|35621_35825_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_000227969.1\|37059_38136_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_032716625.1\|38890_40444_-	L-lactate permease	NA	NA	NA	NA
WP_003033249.1\|40879_42577_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_001102107.1\|42651_43371_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000023895.1\|43381_44809_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_004118595.1\|44801_45497_+	lactate utilization protein C	NA	NA	NA	NA
WP_003031542.1\|45546_45984_-	gluconate transporter	NA	NA	NA	NA
WP_004118600.1\|46137_46449_+	hypothetical protein	NA	NA	NA	NA
WP_000990392.1\|46445_46865_+	helix-turn-helix domain-containing protein	A0A222YXG1	Escherichia_phage	1.8e-06	31.4
WP_003031541.1\|46901_48104_-	hypothetical protein	A0A222YXT1	Escherichia_phage	3.9e-126	63.6
WP_004118613.1\|48096_48426_-	hypothetical protein	A0A222YYR0	Escherichia_phage	6.7e-36	65.1
WP_000611681.1\|48422_48944_-	hypothetical protein	A0A222YZ79	Escherichia_phage	6.4e-49	53.8
WP_000124733.1\|49275_49506_-	hypothetical protein	NA	NA	NA	NA
WP_077253206.1\|49505_49862_-	recombination enhancement function domain protein	Q71TG3	Escherichia_phage	4.2e-36	65.2
WP_001114073.1\|50414_50768_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	4.1e-23	50.0
WP_000783215.1\|50815_51178_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_040118429.1\|51195_52947_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_000922630.1\|52995_54285_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	2.5e-171	73.5
WP_000065758.1\|54297_54723_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-50	70.7
WP_102047566.1\|54753_55020_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|55093_55798_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_003026799.1\|56801_57068_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_003026803.1\|57055_57538_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004118622.1\|58744_60244_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_038423655.1\|60240_60996_+	ATPase AAA	U5N3V8	Enterobacteria_phage	2.4e-33	33.9
WP_000019473.1\|62880_63861_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_004159231.1\|64037_64364_+	hypothetical protein	NA	NA	NA	NA
WP_004152692.1\|65069_65939_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004152693.1\|65932_66943_-	phosphonate dehydrogenase PtxD	A0A1V0SBV6	Catovirus	1.4e-15	25.1
WP_004152694.1\|66951_67779_-	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA
WP_004152695.1\|67787_68651_-	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012637488.1\|68647_69475_-	phosphonate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-20	37.6
WP_004118541.1\|69658_72667_-\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	62.8
WP_040118433.1\|72827_73385_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	8.4e-39	47.2
WP_004118538.1\|73516_73849_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_011977829.1\|74202_75351_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
WP_004118534.1\|75625_76000_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
WP_001549953.1\|76528_77725_+	MFS transporter	NA	NA	NA	NA
WP_004118529.1\|77796_78624_-	universal stress protein	NA	NA	NA	NA
WP_001549885.1\|78642_80121_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
WP_001549886.1\|80604_80958_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
WP_003100847.1\|81094_81652_-	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_040118442.1\|81645_82014_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|82043_82748_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_003100856.1\|82841_83342_-	hypothetical protein	NA	NA	NA	NA
WP_006812576.1\|83338_83665_-	hypothetical protein	NA	NA	NA	NA
WP_003465043.1\|83919_84276_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|84265_84667_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|84663_84954_-	nucleotidyltransferase	NA	NA	NA	NA
WP_001067855.1\|85090_85795_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|86047_86752_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_032427315.1\|87337_87553_-	hypothetical protein	NA	NA	NA	NA
WP_004152286.1\|87775_88858_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_032427316.1\|88979_92054_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.6
WP_003846917.1\|92105_93359_+	lactose permease	NA	NA	NA	NA
WP_004152290.1\|95064_97374_+	ATPase	NA	NA	NA	NA
WP_004152291.1\|97377_98694_+	ATP-binding protein	NA	NA	NA	NA
WP_000093087.1\|98690_100886_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_009486390.1\|101507_101696_+	hypothetical protein	NA	NA	NA	NA
WP_040118400.1\|102372_103245_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_071887233.1\|103237_103309_-	RepA leader peptide Tap	NA	NA	NA	NA
WP_040118434.1\|103524_103794_-	replication regulatory protein RepA	NA	NA	NA	NA
WP_051800686.1\|103934_104501_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	3.0e-20	38.8
WP_071889121.1\|104507_104735_-	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_004118865.1\|106608_107418_-	N-formylglutamate deformylase	NA	NA	NA	NA
WP_004118868.1\|107410_108619_-	imidazolonepropionase	NA	NA	NA	NA
WP_004118873.1\|108630_110022_-	cytosine permease	NA	NA	NA	NA
WP_040118402.1\|110074_111751_-	urocanate hydratase	NA	NA	NA	NA
WP_040118404.1\|114500_115058_-	HutD family protein	NA	NA	NA	NA
WP_032413289.1\|115054_115816_-	histidine utilization repressor	NA	NA	NA	NA
WP_004118890.1\|115914_117282_+	formimidoylglutamate deiminase	NA	NA	NA	NA
WP_004118895.1\|119001_120408_+	cytosine permease	NA	NA	NA	NA
WP_004118898.1\|120444_122034_+	AMP-binding protein	Q75ZG1	Hepacivirus	3.6e-34	25.0
WP_004118901.1\|122030_123023_+	2-hydroxychromene-2-carboxylate isomerase	NA	NA	NA	NA
WP_077255420.1\|123628_123928_+	hypothetical protein	Q71TE9	Escherichia_phage	1.1e-24	63.6
WP_004118922.1\|125262_126228_-	DMT family transporter	NA	NA	NA	NA
WP_004118925.1\|126224_127043_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-28	38.3
WP_004118928.1\|127047_127710_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_004118931.1\|127706_128378_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_004118155.1\|128401_129250_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_004118935.1\|129406_130360_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.3e-10	24.3
WP_004118158.1\|130446_131658_+	M24 family metallopeptidase	NA	NA	NA	NA
WP_047665746.1\|131833_132757_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.7e-166	92.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042545

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP042547

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP042548

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP042546

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection