CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP042534	Citrobacter freundii strain E51 chromosome, complete genome	0 crisprs	csa3,WYL,cas3,DEDDh,DinG,RT	11
NZ_CP042538	Citrobacter freundii strain E51 plasmid pE51_004, complete sequence	0 crisprs	NA	0
NZ_CP042537	Citrobacter freundii strain E51 plasmid pE51_003, complete sequence	0 crisprs	DEDDh	1
NZ_CP042535	Citrobacter freundii strain E51 plasmid pE51_001, complete sequence	0 crisprs	csa3,DinG	17
NZ_CP042536	Citrobacter freundii strain E51 plasmid pE51_002, complete sequence	0 crisprs	NA	0
NZ_CP042539	Citrobacter freundii strain E51 plasmid pE51_005, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

802261 : 872271

Cronobacter_phage(14.29%)

tRNA,protease,integrase,plate

attL 815420:815438|attR 869692:869710

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044713759.1\|802261_802687_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_044713761.1\|802689_804525_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_044713831.1\|804491_805538_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_044713832.1\|805554_806853_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_044713763.1\|806849_807383_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_044713765.1\|807385_808729_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_044713767.1\|808733_809543_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_071698371.1\|809551_812287_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	8.2e-87	31.7
WP_167736229.1\|812283_813030_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_044713772.1\|813034_814456_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_136345917.1\|814479_818004_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
815420:815438	attL	NA	NA	NA	NA
WP_136345916.1\|818014_819382_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_044713777.1\|819384_819864_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_044713779.1\|820064_820922_-	hypothetical protein	NA	NA	NA	NA
WP_136345915.1\|822559_822883_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_130715145.1\|823317_823689_+	hypothetical protein	NA	NA	NA	NA
WP_136345914.1\|824526_825075_-	hypothetical protein	NA	NA	NA	NA
WP_167736230.1\|825075_829182_-	RHS domain-containing protein	S5W9C6	Leptospira_phage	1.9e-07	32.8
WP_136345913.1\|829249_831361_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	6.2e-26	25.0
WP_136345912.1\|832957_833230_-	hypothetical protein	NA	NA	NA	NA
WP_130715124.1\|833544_835041_+	DUF3375 domain-containing protein	NA	NA	NA	NA
WP_130715148.1\|835139_835796_+	DUF4194 domain-containing protein	NA	NA	NA	NA
WP_136345911.1\|835792_839080_+	hypothetical protein	NA	NA	NA	NA
WP_136345910.1\|839081_840230_+	hypothetical protein	NA	NA	NA	NA
WP_130715127.1\|840328_842401_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_136345909.1\|842478_846672_+	hypothetical protein	A0A2H4PQT3	Staphylococcus_phage	3.8e-75	29.5
WP_088903068.1\|846960_847422_+	hypothetical protein	NA	NA	NA	NA
WP_048213204.1\|849624_850182_-	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	1.8e-20	53.5
WP_088903070.1\|850389_851649_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	1.3e-82	44.6
WP_003846348.1\|851992_852700_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_003838203.1\|853168_855304_+	ornithine decarboxylase	NA	NA	NA	NA
WP_003027130.1\|855356_856613_-	nucleoside permease	NA	NA	NA	NA
WP_167736231.1\|856824_857910_-	membrane-bound lytic murein transglycosylase MltC	A0A0H3V0Q1	Geobacillus_virus	4.5e-12	39.0
WP_003027126.1\|857996_858266_-	oxidative damage protection protein	NA	NA	NA	NA
WP_003846351.1\|858293_859346_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003027117.1\|859506_860226_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_003027115.1\|860225_860552_+	YggL family protein	NA	NA	NA	NA
WP_003838208.1\|860601_861321_+	DUF2884 domain-containing protein	NA	NA	NA	NA
WP_044713806.1\|861509_862556_+	L-asparaginase 2	NA	NA	NA	NA
WP_003838210.1\|862672_863680_+	DUF1202 family protein	NA	NA	NA	NA
WP_088903071.1\|863742_864879_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA
WP_003027104.1\|864871_865465_-	XTP/dITP diphosphatase	NA	NA	NA	NA
WP_003027101.1\|865472_865763_-	YggU family protein	NA	NA	NA	NA
WP_003825417.1\|865759_866326_-	YggT family protein	NA	NA	NA	NA
WP_003838215.1\|866344_867049_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_088903072.1\|867066_868047_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_006686843.1\|868043_868460_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_123924839.1\|868459_869095_-	YqgE/AlgH family protein	NA	NA	NA	NA
WP_003027083.1\|869198_870146_-	glutathione synthase	NA	NA	NA	NA
869692:869710	attR	NA	NA	NA	NA
WP_003027080.1\|870165_870897_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_016150969.1\|870971_871679_-	deoxyribonuclease I	NA	NA	NA	NA
WP_003838223.1\|871773_872271_-\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_2

923085 : 964010

uncultured_Caudovirales_phage(30.77%)

tRNA,integrase,transposase

attL 947045:947059|attR 954979:954993

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003026944.1\|923085_924066_-\|tRNA	tRNA-modifying protein YgfZ	NA	NA	NA	NA
WP_003026938.1\|924322_924589_+	FAD assembly factor SdhE	NA	NA	NA	NA
WP_003026936.1\|924569_924977_+	protein YgfX	NA	NA	NA	NA
WP_003026933.1\|925021_925543_-	flavodoxin FldB	NA	NA	NA	NA
WP_088903084.1\|925656_926553_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	4.3e-29	27.6
WP_003825520.1\|926576_927290_+	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA
WP_048232743.1\|927295_929029_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.5e-62	28.7
WP_096878465.1\|929120_930218_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	1.8e-05	39.0
WP_003026911.1\|930228_931746_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.3e-86	36.9
WP_136345903.1\|931823_932378_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_016150941.1\|932544_933303_+	peptidoglycan DD-metalloendopeptidase family protein	A0A7K9	Microcystis_virus	3.2e-09	37.3
WP_000778549.1\|933620_934814_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	5.4e-136	60.0
WP_000460992.1\|935020_936169_+	SIR2 family protein	NA	NA	NA	NA
WP_000022894.1\|936165_937941_+	ATP-binding protein	NA	NA	NA	NA
WP_001135895.1\|938133_938487_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	8.2e-24	51.9
WP_000855179.1\|938534_938897_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_016538087.1\|938914_940666_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_016538086.1\|940712_942002_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-171	74.0
WP_000065761.1\|942014_942440_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	3.3e-51	70.0
WP_001057013.1\|942470_944228_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_000034287.1\|944248_944611_-	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_001286343.1\|944686_945232_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_000145398.1\|945240_945954_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	5.6e-96	72.6
WP_000423544.1\|945955_946279_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000665320.1\|946464_947040_-	hypothetical protein	NA	NA	NA	NA
947045:947059	attL	NA	NA	NA	NA
WP_000985661.1\|947142_947349_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000347296.1\|947452_948034_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_000003883.1\|948412_949210_+	hypothetical protein	NA	NA	NA	NA
WP_000219087.1\|950102_951341_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001515348.1\|951816_952389_+	cytochrome b/b6 domain-containing protein	NA	NA	NA	NA
WP_000167917.1\|952588_953512_+	cation transporter	NA	NA	NA	NA
WP_001324664.1\|953684_954287_-\|integrase	tyrosine-type recombinase/integrase	A0A1V0E036	Clostridioides_phage	1.1e-07	31.2
WP_001324663.1\|954378_954570_-	hypothetical protein	NA	NA	NA	NA
WP_000019441.1\|954704_955685_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	2.3e-185	99.1
954979:954993	attR	NA	NA	NA	NA
WP_001324800.1\|955934_957065_+	DUF4297 domain-containing protein	NA	NA	NA	NA
WP_087451024.1\|957433_958553_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_004958618.1\|960284_961577_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_172740623.1\|961575_962469_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000219087.1\|962771_964010_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1828982 : 1837401

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_136345870.1\|1828982_1829930_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	1.7e-07	25.3
WP_003844383.1\|1829913_1830645_+	ABC transporter permease	NA	NA	NA	NA
WP_003027354.1\|1830625_1830733_-	protein YohO	NA	NA	NA	NA
WP_049002964.1\|1830784_1831516_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.8e-105	93.5
WP_003027348.1\|1831741_1833427_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.7e-281	91.6
WP_003840155.1\|1833423_1834143_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_003027346.1\|1834189_1834660_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	4.9e-64	76.9
WP_071697500.1\|1834702_1835161_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.0e-50	69.3
WP_003027344.1\|1835367_1837401_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	4.0e-54	27.6

DBSCAN-SWA_4

1876769 : 1886347

Bacillus_phage(28.57%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167736259.1\|1876769_1878716_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	7.0e-40	41.3
WP_003036813.1\|1878790_1879015_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
WP_003036810.1\|1879338_1879659_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
WP_003036804.1\|1879689_1881966_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-164	42.1
WP_003844346.1\|1882235_1883597_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	4.1e-204	92.9
WP_003841759.1\|1883756_1884089_-	YegP family protein	NA	NA	NA	NA
WP_003036797.1\|1884224_1884947_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	9.2e-30	32.7
WP_003844344.1\|1884943_1886347_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	5.0e-32	29.2

DBSCAN-SWA_5

2009569 : 2017576

Salmonella_phage(28.57%)

integrase

attL 2007675:2007688|attR 2021479:2021492

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2007675:2007688	attL	NA	NA	NA	NA
WP_044711147.1\|2009569_2010553_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.7e-165	82.3
WP_044711145.1\|2010557_2010779_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	3.0e-24	70.3
WP_044711143.1\|2010955_2011780_-	DUF2303 family protein	U5P439	Shigella_phage	8.0e-147	97.4
WP_072211986.1\|2011845_2012226_-	hypothetical protein	U5P4J6	Shigella_phage	5.3e-61	97.6
WP_044711136.1\|2012643_2013348_+	hypothetical protein	NA	NA	NA	NA
WP_044711135.1\|2013393_2014065_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	3.1e-72	54.5
WP_003839058.1\|2014828_2015161_+	EmrE family multidrug efflux SMR transporter	NA	NA	NA	NA
WP_044711132.1\|2015263_2016442_-	porin OmpC	Q1MVN1	Enterobacteria_phage	9.9e-106	55.7
WP_003839062.1\|2016883_2017576_+	phosphohydrolase	S4W232	Pandoravirus	8.0e-07	27.1
2021479:2021492	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2055623 : 2094758

Salmonella_phage(25.0%)

integrase,portal,tail,capsid,protease,terminase,head

attL 2055442:2055501|attR 2097426:2097549

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2055442:2055501	attL	NA	NA	NA	NA
WP_071692372.1\|2055623_2056634_-\|integrase	tyrosine-type recombinase/integrase	K7PLZ2	Enterobacterial_phage	1.0e-172	86.9
WP_065944714.1\|2056633_2056861_-	DUF4224 domain-containing protein	K7PHA0	Enterobacterial_phage	4.6e-36	88.0
WP_172740629.1\|2056894_2057173_-	hypothetical protein	K7PKM4	Enterobacterial_phage	6.2e-19	57.3
WP_003834015.1\|2057175_2057565_-	hypothetical protein	S4TTI6	Salmonella_phage	5.3e-56	79.7
WP_167736265.1\|2057561_2058254_-	hypothetical protein	A0A1C9IHU7	Salmonella_phage	2.2e-28	56.8
WP_167736266.1\|2058243_2058480_-	hypothetical protein	G8C7U9	Escherichia_phage	1.9e-24	81.7
WP_167736394.1\|2058485_2058842_-	hypothetical protein	A0A0K2FJF6	Enterobacteria_phage	5.9e-38	68.8
WP_167736267.1\|2059192_2059759_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_167736268.1\|2060323_2061364_-	chromosome partitioning protein ParB	K7PKM7	Enterobacterial_phage	7.2e-161	86.9
WP_167736269.1\|2061363_2061777_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.1e-46	72.1
WP_151564552.1\|2062527_2062743_-	hypothetical protein	A0A193GYF6	Enterobacter_phage	2.3e-13	46.5
WP_160180129.1\|2062987_2063635_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	62.5
WP_032207801.1\|2063739_2063937_+	Cro/Cl family transcriptional regulator	H9C161	Pectobacterium_phage	1.9e-17	66.7
WP_160180131.1\|2063962_2064427_+	hypothetical protein	K7PJS5	Enterobacterial_phage	5.8e-70	90.1
WP_160180134.1\|2064667_2064853_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.3e-12	65.4
WP_065944720.1\|2064836_2065781_+	conserved phage C-terminal domain-containing protein	K7PLZ7	Enterobacterial_phage	6.4e-148	81.2
WP_160180136.1\|2065783_2066227_+	hypothetical protein	U5P0U0	Shigella_phage	8.2e-13	30.7
WP_160180138.1\|2066226_2066895_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	4.0e-96	80.1
WP_003833987.1\|2066881_2067100_+	hypothetical protein	NA	NA	NA	NA
WP_160180140.1\|2067101_2067419_+	LexA family transcriptional regulator	K7PHB4	Enterobacterial_phage	2.4e-27	56.7
WP_069891578.1\|2067418_2067808_+	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	3.5e-44	66.7
WP_003833980.1\|2067824_2068550_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	9.8e-56	53.1
WP_160180142.1\|2068546_2069536_+	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	3.8e-143	71.4
WP_160180144.1\|2069550_2070129_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-49	55.6
WP_096878852.1\|2070207_2070687_-	hypothetical protein	F1C594	Cronobacter_phage	4.2e-39	56.7
WP_016150433.1\|2070935_2071214_+	hypothetical protein	K7PGZ9	Enterobacteria_phage	4.3e-44	95.7
WP_160180146.1\|2071185_2071734_+	glycoside hydrolase family protein	K7PM52	Enterobacteria_phage	1.5e-96	91.8
WP_160180788.1\|2071730_2072246_+	DUF2514 family protein	A0A291LBG9	Klebsiella_phage	1.2e-07	49.4
WP_160180149.1\|2072372_2073242_+	hypothetical protein	NA	NA	NA	NA
WP_160180151.1\|2073417_2073768_+	HNH endonuclease	K7PHK9	Enterobacteria_phage	1.0e-50	79.3
WP_136346206.1\|2073925_2074423_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	3.3e-63	72.6
WP_136346205.1\|2074426_2076178_+\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	9.7e-259	71.6
WP_136346204.1\|2076188_2076374_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	9.9e-13	59.3
WP_136346203.1\|2076373_2077603_+\|portal	phage portal protein	U5P411	Shigella_phage	1.3e-204	82.7
WP_016150486.1\|2077589_2078243_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.3e-104	85.5
WP_016150485.1\|2078256_2079465_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	6.2e-188	82.9
WP_048221283.1\|2079790_2080114_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	8.6e-20	49.0
WP_142972778.1\|2080123_2080462_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	7.3e-38	67.9
WP_086539186.1\|2080458_2080908_+	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	5.0e-66	85.9
WP_048221286.1\|2080904_2081252_+	DUF3168 domain-containing protein	A0A220NRP0	Escherichia_phage	8.3e-45	75.7
WP_167736270.1\|2081309_2082014_+\|tail	phage tail protein	K7PHL2	Enterobacterial_phage	1.8e-91	73.1
WP_016150478.1\|2082041_2082431_+	hypothetical protein	K7PKV6	Enterobacterial_phage	1.6e-57	84.5
WP_167736271.1\|2082439_2082718_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	4.4e-41	92.4
WP_167736272.1\|2082774_2083110_+	zinc ribbon domain-containing protein	S4TR42	Salmonella_phage	5.2e-44	78.4
WP_167736273.1\|2083156_2086468_+\|tail	phage tail tape measure protein	S4TTF9	Salmonella_phage	0.0e+00	80.6
WP_079934714.1\|2086510_2086771_+	DUF1327 domain-containing protein	Q5G8W5	Enterobacteria_phage	5.5e-17	60.5
WP_079934715.1\|2086775_2087063_-	hypothetical protein	I6S632	Salmonella_phage	3.6e-38	85.3
WP_167736274.1\|2087225_2087819_+	hypothetical protein	S4TSP7	Salmonella_phage	1.2e-107	95.9
WP_038642083.1\|2087818_2088403_+	hypothetical protein	S4TND4	Salmonella_phage	6.0e-104	96.4
WP_167736275.1\|2088409_2088808_+	hypothetical protein	S4TR39	Salmonella_phage	7.2e-69	93.2
WP_167736276.1\|2088807_2091531_+	DUF1983 domain-containing protein	S4TTF5	Salmonella_phage	0.0e+00	94.7
WP_167736277.1\|2091533_2092478_+	hypothetical protein	H6WRW5	Salmonella_phage	1.2e-117	65.5
WP_167736278.1\|2092487_2093909_+\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	4.7e-110	50.1
WP_000497432.1\|2094047_2094290_-	DinI family protein	Q6UAW0	Klebsiella_phage	3.4e-29	76.6
WP_130714570.1\|2094368_2094758_+	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	3.9e-51	72.9
2097426:2097549	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2728157 : 2734507

Staphylococcus_phage(16.67%)

integrase,transposase

attL 2718065:2718123|attR 2732569:2732627

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2718065:2718123	attL	NA	NA	NA	NA
WP_075335826.1\|2728157_2729318_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	6.0e-39	36.4
WP_088902365.1\|2729406_2730180_-	hypothetical protein	G9IA57	Pseudomonas_phage	8.0e-40	39.6
WP_088902366.1\|2730341_2731349_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	4.2e-57	36.0
WP_088902367.1\|2731332_2731911_-	S-adenosylmethionine-binding protein	A0A193GYV6	Enterobacter_phage	2.9e-79	71.7
WP_088902368.1\|2732250_2732568_+\|integrase	tyrosine-type recombinase/integrase	A0A0U2JGI6	Escherichia_phage	2.7e-26	57.0
WP_088902369.1\|2733045_2733768_+	substrate-binding domain-containing protein	NA	NA	NA	NA
2732569:2732627	attR	NA	NA	NA	NA
WP_003836510.1\|2733754_2734507_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	6.7e-07	30.8

DBSCAN-SWA_8

2818286 : 2828324

Cedratvirus(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003836641.1\|2818286_2819066_+	heme ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	7.9e-11	26.7
WP_048216528.1\|2819062_2820505_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	7.7e-52	35.3
WP_003836643.1\|2820566_2821280_-	EAL domain-containing protein	NA	NA	NA	NA
WP_003836644.1\|2821596_2822061_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	3.5e-14	38.2
WP_003030567.1\|2822138_2822888_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2R8FG22	Brazilian_cedratvirus	9.3e-09	30.3
WP_003030569.1\|2822887_2823439_-	glutathione peroxidase	NA	NA	NA	NA
WP_003832584.1\|2823499_2824480_-	vitamin B12 ABC transporter permease BtuC	A0A2H4IY97	uncultured_Caudovirales_phage	6.7e-15	24.8
WP_003030571.1\|2824633_2824933_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_003030574.1\|2824937_2827325_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003832580.1\|2827340_2828324_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.4e-33	38.5

DBSCAN-SWA_9

2836839 : 2878612

Cronobacter_phage(29.63%)

lysis,integrase,holin,capsid

attL 2831903:2831925|attR 2878793:2878815

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2831903:2831925	attL	NA	NA	NA	NA
WP_167736307.1\|2836839_2839317_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	0.0e+00	87.5
WP_167736308.1\|2839303_2839696_-	C40 family peptidase	F1C5F2	Cronobacter_phage	4.0e-64	87.9
WP_167736309.1\|2839705_2840176_-	hypothetical protein	F1C5F1	Cronobacter_phage	2.6e-78	91.7
WP_167736310.1\|2840175_2840673_-	hypothetical protein	F1C5F0	Cronobacter_phage	5.1e-88	90.3
WP_167736396.1\|2840672_2843000_-	tape measure protein	A0A1B1W284	Salmonella_phage	7.3e-145	51.7
WP_049003437.1\|2843783_2844455_-	hypothetical protein	G0ZNE7	Cronobacter_phage	7.7e-55	50.2
WP_049003435.1\|2844512_2845256_-	Ig domain-containing protein	F1C5E5	Cronobacter_phage	5.9e-72	86.7
WP_032608745.1\|2845318_2845702_-	hypothetical protein	F1C5E4	Cronobacter_phage	2.3e-40	64.6
WP_049003432.1\|2845698_2846163_-	hypothetical protein	A0A2P1MXA4	Escherichia_phage	3.1e-31	45.5
WP_049003430.1\|2846165_2846522_-	hypothetical protein	G0ZNE2	Cronobacter_phage	4.2e-28	58.1
WP_049003424.1\|2846673_2846844_-	hypothetical protein	A0A1V0E5P1	Salmonella_phage	1.7e-11	50.0
WP_049003423.1\|2846843_2847224_-	hypothetical protein	F1C5E2	Cronobacter_phage	4.5e-28	53.7
WP_152960162.1\|2847226_2847454_-	hypothetical protein	NA	NA	NA	NA
WP_049003420.1\|2847465_2848548_-	hypothetical protein	F1C5E1	Cronobacter_phage	7.6e-145	69.9
WP_049003418.1\|2848559_2848991_-	hypothetical protein	F1C5E0	Cronobacter_phage	3.8e-47	68.5
WP_049003417.1\|2848994_2850383_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	5.3e-151	59.4
WP_049003415.1\|2850454_2850967_-	hypothetical protein	NA	NA	NA	NA
WP_065241400.1\|2851007_2852012_-\|capsid	minor capsid protein	F1C5D8	Cronobacter_phage	9.3e-113	67.7
WP_152692361.1\|2851944_2853414_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	2.9e-155	60.2
WP_049003411.1\|2853424_2854987_-	hypothetical protein	G8C7P3	Escherichia_phage	1.4e-304	93.1
WP_049003408.1\|2854983_2855634_-	phage protein	G8C7P2	Escherichia_phage	3.8e-91	80.1
WP_049003406.1\|2855637_2855856_-	hypothetical protein	NA	NA	NA	NA
WP_049003405.1\|2856024_2856303_+	hypothetical protein	NA	NA	NA	NA
WP_049003464.1\|2856303_2856762_-\|lysis	lysis protein	A0A2H4FNE5	Salmonella_phage	4.9e-53	76.6
WP_167736311.1\|2856770_2857220_-	glycoside hydrolase family protein	A0A0M4R365	Salmonella_phage	4.0e-68	84.6
WP_122008274.1\|2857206_2857512_-\|holin	phage holin family protein	E7C9S8	Salmonella_phage	1.1e-43	86.1
WP_049003324.1\|2857670_2857859_-	hypothetical protein	NA	NA	NA	NA
WP_049003320.1\|2858306_2858996_-	antiterminator	I6PDF8	Cronobacter_phage	1.3e-52	50.6
WP_049003316.1\|2858992_2859133_-	YlcG family protein	K7PHH3	Enterobacteria_phage	3.0e-06	74.2
WP_049003315.1\|2859129_2859741_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	2.4e-39	50.2
WP_049003313.1\|2859733_2860402_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.3e-126	96.4
WP_049003311.1\|2860398_2860569_-	NinE family protein	K7P7K0	Enterobacteria_phage	3.8e-11	60.7
WP_049003308.1\|2860561_2861011_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.4e-36	51.4
WP_049003307.1\|2861210_2861465_-	hypothetical protein	NA	NA	NA	NA
WP_049003305.1\|2861464_2861722_-	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	8.0e-29	80.3
WP_049003302.1\|2862141_2862354_-	hypothetical protein	K7PKY3	Enterobacterial_phage	5.8e-33	91.4
WP_049003300.1\|2862350_2862623_-	hypothetical protein	A0A220IH78	Escherichia_phage	2.6e-25	69.7
WP_167736312.1\|2862619_2863162_-	DUF551 domain-containing protein	A0A193GYX5	Enterobacter_phage	4.7e-10	45.6
WP_167736313.1\|2863158_2863806_-	hypothetical protein	Q1MVG0	Enterobacteria_phage	4.3e-111	82.6
WP_167736314.1\|2864353_2864653_-	protein ren	M1FPD5	Enterobacteria_phage	4.8e-17	52.6
WP_167736315.1\|2864654_2865344_-	phage replication protein	G8C7U6	Escherichia_phage	4.7e-124	93.0
WP_167736316.1\|2865340_2866282_-	replication protein	A5VW95	Enterobacteria_phage	2.4e-54	80.2
WP_167736317.1\|2866467_2867010_-	regulator	M9NZI6	Enterobacteria_phage	3.8e-89	93.9
WP_032936025.1\|2867040_2867268_-	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	9.2e-37	98.7
WP_032936028.1\|2867378_2868083_+	helix-turn-helix transcriptional regulator	A0A2H4FNG6	Salmonella_phage	5.2e-86	64.6
WP_167736318.1\|2868097_2868787_+	hypothetical protein	NA	NA	NA	NA
WP_167736319.1\|2869648_2869846_+	hypothetical protein	NA	NA	NA	NA
WP_172740632.1\|2869901_2870543_+	hypothetical protein	A5PJ37	Escherichia_virus	5.7e-23	38.2
WP_160180348.1\|2870578_2870959_+	hypothetical protein	NA	NA	NA	NA
WP_167736321.1\|2871110_2871320_+	cell division protein FtsZ	M9NZE2	Enterobacteria_phage	7.0e-31	89.9
WP_167736322.1\|2871390_2872362_+	hypothetical protein	M9P0E1	Enterobacteria_phage	1.3e-42	59.8
WP_160180351.1\|2872369_2872654_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	4.7e-46	90.4
WP_160180352.1\|2872671_2873418_+	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	1.8e-65	65.8
WP_160180354.1\|2873414_2874032_+	YqaJ viral recombinase family protein	A0A0S2SY31	Pseudomonas_phage	1.2e-59	57.8
WP_160180356.1\|2874028_2874457_+	regulator	M9NYX4	Enterobacteria_phage	1.7e-71	95.1
WP_160180358.1\|2874453_2874606_+	DUF1317 family protein	T1SAR0	Salmonella_phage	3.6e-05	44.2
WP_167736323.1\|2874602_2875154_+	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	2.0e-53	58.4
WP_163199154.1\|2875150_2875369_+	hypothetical protein	NA	NA	NA	NA
WP_163199152.1\|2875466_2875685_+	Lar family restriction alleviation protein	NA	NA	NA	NA
WP_163199150.1\|2875681_2875903_+	TraR/DksA C4-type zinc finger protein	A0A0N7C211	Escherichia_phage	6.3e-14	54.5
WP_163199148.1\|2875902_2876316_+	DUF2591 family protein	G0ZNC2	Cronobacter_phage	3.6e-23	53.2
WP_163199146.1\|2876278_2876518_+	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	1.3e-09	45.5
WP_163199144.1\|2876527_2876719_+	hypothetical protein	NA	NA	NA	NA
WP_163199143.1\|2876728_2877103_+	hypothetical protein	A0A0P0ZB93	Stx2-converting_phage	1.4e-34	61.4
WP_032936075.1\|2877209_2877446_+	hypothetical protein	A0A1P8DTG1	Proteus_phage	3.3e-13	53.7
WP_167736324.1\|2877403_2878612_-\|integrase	tyrosine-type recombinase/integrase	I6R9B6	Salmonella_phage	1.1e-181	76.9
2878793:2878815	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2969671 : 2975441

uncultured_Caudovirales_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088902418.1\|2969671_2970166_-	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	3.4e-07	32.4
WP_003030760.1\|2971047_2971473_-	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	7.3e-51	70.7
WP_016150088.1\|2971485_2972775_-	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	3.2e-166	70.4
WP_003030762.1\|2972819_2973140_-	transcriptional regulator	A0A2H4J145	uncultured_Caudovirales_phage	3.2e-19	44.8
WP_008320415.1\|2973225_2973924_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.8e-89	68.1
WP_003840850.1\|2974311_2974554_+	DinI family protein	Q6UAW0	Klebsiella_phage	1.5e-29	77.9
WP_003030767.1\|2974643_2975153_+	VTT domain-containing protein	NA	NA	NA	NA
WP_096878644.1\|2975288_2975441_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.1e-20	94.0

DBSCAN-SWA_11

3267175 : 3332763

Salmonella_phage(65.38%)

integrase,portal,tail,tRNA,capsid,lysis,plate,terminase,transposase,head

attL 3297097:3297114|attR 3331230:3331247

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088902490.1\|3267175_3268468_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.8e-93	48.2
WP_003836910.1\|3268560_3269904_-	replication-associated recombination protein RarA	G3MBE0	Bacillus_virus	4.3e-81	40.8
WP_003831898.1\|3269914_3270526_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_136345709.1\|3270637_3274699_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.9e-88	49.2
WP_002439523.1\|3274833_3275328_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_003035727.1\|3275875_3276844_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.9e-62	44.3
WP_088902491.1\|3276958_3278725_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.4e-23	26.2
WP_003847023.1\|3278725_3280447_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	8.1e-16	23.6
WP_032948928.1\|3280491_3281196_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_002211347.1\|3281481_3281700_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_003847025.1\|3281779_3282691_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003847027.1\|3282799_3283660_+	pirin family protein	NA	NA	NA	NA
WP_016149852.1\|3283676_3284354_+	isochorismatase family protein	NA	NA	NA	NA
WP_044701666.1\|3285274_3286402_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	1.6e-28	27.4
WP_003035378.1\|3286443_3286932_-	YbjO family protein	NA	NA	NA	NA
WP_003035376.1\|3286991_3287837_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_003035374.1\|3287833_3288787_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_003035373.1\|3288796_3289930_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.1e-29	34.9
WP_003035370.1\|3290068_3291181_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_003035368.1\|3291614_3292091_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_003836932.1\|3292181_3293084_-	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.0e-37	34.0
WP_003836934.1\|3293143_3293866_-	nitroreductase NfsA	NA	NA	NA	NA
WP_003845523.1\|3293849_3294140_-	YbjC family protein	NA	NA	NA	NA
WP_003035358.1\|3294312_3294576_+	glutaredoxin, GrxA family	A0A2I7SAE2	Vibrio_phage	3.8e-26	67.9
WP_003035356.1\|3294610_3294991_-	membrane protein	NA	NA	NA	NA
WP_003035354.1\|3295260_3296946_+	aspartate:alanine antiporter	NA	NA	NA	NA
3297097:3297114	attL	NA	NA	NA	NA
WP_150344849.1\|3297181_3297529_-	hypothetical protein	NA	NA	NA	NA
WP_058842448.1\|3297556_3297772_-	ogr/Delta-like zinc finger family protein	Q53ZE7	Salmonella_virus	3.6e-22	70.8
WP_167736336.1\|3297839_3298940_-	phage late control D family protein	E5G6Q3	Salmonella_phage	9.6e-188	94.3
WP_167736337.1\|3298936_3299422_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.9e-65	96.9
WP_167736338.1\|3299418_3302193_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	1.0e-116	42.3
WP_167736339.1\|3302185_3302305_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	3.3e-14	92.3
WP_032233623.1\|3302319_3302622_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.5e-42	94.9
WP_024552851.1\|3302676_3303192_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	5.1e-91	98.2
WP_048232591.1\|3303201_3304374_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.2e-213	94.6
WP_080700401.1\|3304613_3304865_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	2.4e-22	68.5
WP_048232592.1\|3304857_3305139_-	hypothetical protein	NA	NA	NA	NA
WP_001397640.1\|3306832_3307438_-\|tail	phage tail protein I	E5G6N9	Salmonella_phage	4.6e-115	98.0
WP_167736340.1\|3307430_3308339_-\|plate	baseplate J/gp47 family protein	E5G6N8	Salmonella_phage	5.2e-147	92.7
WP_048232594.1\|3308325_3308685_-	GPW/gp25 family protein	E5G6N7	Salmonella_phage	3.0e-58	95.8
WP_167736341.1\|3308681_3309260_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.6e-104	95.3
WP_016150805.1\|3309328_3309775_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.2e-65	88.4
WP_167736342.1\|3309767_3310199_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	5.8e-72	94.4
WP_167736343.1\|3310294_3310723_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	1.3e-63	94.3
WP_000871620.1\|3310719_3311094_-	hypothetical protein	NA	NA	NA	NA
WP_167736344.1\|3311098_3311608_-	glycoside hydrolase family protein	A0A1S6KZY9	Salmonella_phage	1.7e-91	96.4
WP_000171565.1\|3311588_3311804_-	hypothetical protein	E5G6N0	Salmonella_phage	5.9e-33	100.0
WP_000868184.1\|3311807_3312011_-\|tail	tail protein X	E5G6M9	Salmonella_phage	3.8e-34	100.0
WP_057068446.1\|3312010_3312475_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-84	97.4
WP_000059173.1\|3312568_3313219_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	4.9e-115	100.0
WP_048232602.1\|3313222_3314287_-\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	2.3e-194	98.3
WP_048232604.1\|3314303_3315137_-\|capsid	GPO family capsid scaffolding protein	E5G6M5	Salmonella_phage	1.6e-126	94.6
WP_167736345.1\|3315279_3317046_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	94.4
WP_167736346.1\|3317045_3317771_+\|terminase	terminase-like family protein	E5FFI8	Burkholderia_phage	3.8e-23	33.3
WP_167736347.1\|3317767_3318808_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.8e-175	89.1
WP_016242316.1\|3318858_3319197_-	STAS-like domain-containing protein	NA	NA	NA	NA
WP_016242317.1\|3319196_3320177_-	hypothetical protein	A4PE73	Ralstonia_virus	8.9e-52	42.8
WP_019077493.1\|3320417_3320678_-	hypothetical protein	J9Q7T5	Salmonella_phage	9.0e-20	60.3
WP_019077494.1\|3320751_3320985_-	DinI family protein	A0A1S6L014	Salmonella_phage	1.1e-32	90.9
WP_001154444.1\|3320996_3321185_-	hypothetical protein	A0A1S6L006	Salmonella_phage	2.7e-26	100.0
WP_167736348.1\|3321343_3323752_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	94.8
WP_167736349.1\|3323742_3324600_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1S6L011	Salmonella_phage	4.2e-130	80.0
WP_016150819.1\|3324596_3324824_-	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	3.3e-34	92.0
WP_167736350.1\|3324823_3325057_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	4.1e-32	96.1
WP_167736351.1\|3325124_3325466_-	DUF5347 family protein	A0A1S6L019	Salmonella_phage	4.6e-56	99.1
WP_167736352.1\|3325429_3325630_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	3.9e-31	95.5
WP_087451024.1\|3325729_3326849_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_167736353.1\|3326859_3327372_-	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.2e-85	98.2
WP_012016743.1\|3327404_3327626_-	hypothetical protein	NA	NA	NA	NA
WP_167736354.1\|3327721_3328318_+	helix-turn-helix domain-containing protein	A0A1S6KZZ7	Salmonella_phage	3.6e-40	42.5
WP_167736355.1\|3328338_3330015_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	1.3e-79	66.0
WP_130997529.1\|3330097_3331150_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.0e-106	55.9
WP_172740633.1\|3331176_3331386_-	hypothetical protein	NA	NA	NA	NA
3331230:3331247	attR	NA	NA	NA	NA
WP_088902493.1\|3331551_3332763_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	6.6e-190	89.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP042537

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2110 : 36530

Escherichia_phage(37.5%)

transposase,integrase,protease

attL 1913:1972|attR 22534:23488

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1913:1972	attL	NA	NA	NA	NA
WP_001067834.1\|2110_2815_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_014344500.1\|2848_3121_-	hypothetical protein	NA	NA	NA	NA
WP_000845039.1\|3089_4103_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015060105.1\|4255_4996_+	subclass B1 metallo-beta-lactamase IMP-4	NA	NA	NA	NA
WP_015063357.1\|5227_5560_+	quaternary ammonium compound efflux SMR transporter QacG2	NA	NA	NA	NA
WP_003159191.1\|5686_6241_+	aminoglycoside N-acetyltransferase AAC(6')-Ib4	NA	NA	NA	NA
WP_000186237.1\|6335_6968_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
WP_000679427.1\|7124_7472_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|7465_8305_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|8709_10251_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_003833285.1\|11557_12010_+	SgcJ/EcaC family oxidoreductase	NA	NA	NA	NA
WP_012695489.1\|12051_12696_-	quinolone resistance pentapeptide repeat protein QnrB2	NA	NA	NA	NA
WP_000259031.1\|13186_14026_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_001993321.1\|13955_14135_-	hypothetical protein	NA	NA	NA	NA
WP_004883563.1\|14153_14426_+	hypothetical protein	NA	NA	NA	NA
WP_000427614.1\|14607_15612_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000184001.1\|15839_17045_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|17055_17361_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024143553.1\|17376_17559_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|17587_18352_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001336397.1\|18542_18899_-	hypothetical protein	NA	NA	NA	NA
WP_001137892.1\|18844_19429_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000004159.1\|19428_20667_-	MFS transporter	NA	NA	NA	NA
WP_000219391.1\|20663_21569_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_001067834.1\|21690_22395_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000557454.1\|22627_23488_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
22534:23488	attR	NA	NA	NA	NA
WP_000587837.1\|23500_24043_+	AAA family ATPase	NA	NA	NA	NA
WP_000951934.1\|24524_24716_-	hypothetical protein	NA	NA	NA	NA
WP_001330846.1\|24721_24967_+	hypothetical protein	NA	NA	NA	NA
WP_000080861.1\|25017_26154_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000971921.1\|26268_27639_+\|transposase	IS1182-like element ISCfr1 family transposase	NA	NA	NA	NA
WP_000027057.1\|28459_29320_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_011091091.1\|29988_30498_-	MucR family transcriptional regulator	NA	NA	NA	NA
WP_011091092.1\|30545_32633_-	hypothetical protein	NA	NA	NA	NA
WP_012579091.1\|32645_33596_-	DsbC family protein	NA	NA	NA	NA
WP_045626305.1\|33606_34869_-	hypothetical protein	NA	NA	NA	NA
WP_077256341.1\|34913_35189_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_045626302.1\|35413_35797_-	DUF1496 domain-containing protein	NA	NA	NA	NA
WP_011091025.1\|35876_36530_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP042535

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 7694

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372340.1\|1202_1688_+	hypothetical protein	NA	NA	NA	NA
WP_009651680.1\|1775_2093_+	hypothetical protein	NA	NA	NA	NA
WP_016241545.1\|2114_2513_+	hypothetical protein	NA	NA	NA	NA
WP_007372341.1\|2831_3059_+	hypothetical protein	NA	NA	NA	NA
WP_007372342.1\|3239_4163_+	hypothetical protein	NA	NA	NA	NA
WP_007372343.1\|4198_4522_-	hypothetical protein	NA	NA	NA	NA
WP_007372345.1\|4804_5023_+	hypothetical protein	NA	NA	NA	NA
WP_007372346.1\|5283_5505_+	hypothetical protein	NA	NA	NA	NA
WP_007372347.1\|6080_7694_+	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	2.2e-07	37.0

DBSCAN-SWA_2

13582 : 14908

Enterobacteria_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058654776.1\|13582_14179_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	1.4e-39	47.7
WP_001067855.1\|14203_14908_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_3

29705 : 30826

Leptospira_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085950818.1\|29705_30826_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8

DBSCAN-SWA_4

36239 : 40851

Rhizobium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372241.1\|36239_37319_-	AAA family ATPase	L7TKP0	Rhizobium_phage	3.2e-26	36.4
WP_007372240.1\|37378_37756_-	hypothetical protein	NA	NA	NA	NA
WP_007372239.1\|38127_39237_-	YqaJ viral recombinase family protein	A8HP48	Thalassomonas_phage	7.6e-07	30.1
WP_007372238.1\|39294_40851_-	recombinase RecT	F1C5B8	Cronobacter_phage	6.2e-31	36.4

DBSCAN-SWA_5

65559 : 72143

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372217.1\|65559_67035_-	UvrD-helicase domain-containing protein	A0A1S5R1M3	Pseudomonas_phage	6.0e-44	32.6
WP_007372216.1\|67210_67498_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_007372215.1\|67546_67882_-	hypothetical protein	NA	NA	NA	NA
WP_099531010.1\|68161_68716_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	2.5e-19	32.7
WP_007372214.1\|68751_68961_-	hypothetical protein	NA	NA	NA	NA
WP_007372213.1\|69502_70831_-	hypothetical protein	NA	NA	NA	NA
WP_007372212.1\|71063_72143_-	restriction endonuclease	A0A1P8CWV0	Bacillus_phage	9.0e-05	23.8

DBSCAN-SWA_6

81171 : 124297

Escherichia_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001254932.1\|81171_82323_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-42	35.6
WP_016241518.1\|83381_83807_-	hypothetical protein	NA	NA	NA	NA
WP_099531012.1\|83820_84096_-	hypothetical protein	NA	NA	NA	NA
WP_009652923.1\|84382_84697_-	hypothetical protein	NA	NA	NA	NA
WP_076611902.1\|84919_86266_+\|transposase	ISNCY-like element ISLad2 family transposase	NA	NA	NA	NA
WP_000589340.1\|86324_87128_+	hypothetical protein	NA	NA	NA	NA
WP_000482601.1\|87141_88503_+	FRG domain-containing protein	NA	NA	NA	NA
WP_016239970.1\|88655_89096_+	hypothetical protein	NA	NA	NA	NA
WP_016239971.1\|89113_89920_+	hypothetical protein	NA	NA	NA	NA
WP_016241520.1\|90222_90453_-	hypothetical protein	NA	NA	NA	NA
WP_007372199.1\|90885_91848_+	plasmid stabilization protein	A0A222YXF2	Escherichia_phage	9.6e-59	41.1
WP_009652914.1\|91861_92248_+	plasmid stability protein	NA	NA	NA	NA
WP_007372197.1\|92274_92679_-	FCD domain-containing protein	NA	NA	NA	NA
WP_024196074.1\|92713_93043_+	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA
WP_007372195.1\|93094_93898_-	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	2.1e-14	31.5
WP_007372194.1\|93951_95763_-	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA
WP_007372193.1\|95773_96202_-	diol dehydratase small subunit	NA	NA	NA	NA
WP_009652918.1\|96204_96789_-	propanediol/glycerol family dehydratase medium subunit	NA	NA	NA	NA
WP_016241522.1\|96800_98468_-	propanediol/glycerol family dehydratase large subunit	NA	NA	NA	NA
WP_007372190.1\|98860_99289_+	heme-binding protein	NA	NA	NA	NA
WP_007372189.1\|99311_100475_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_007372188.1\|100491_100845_+	glycerol dehydratase reactivase beta/small subunit family protein	NA	NA	NA	NA
WP_007372187.1\|100845_101376_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_009653098.1\|101353_103279_-	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
WP_007372185.1\|103368_104466_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_007372184.1\|104524_104749_-	hypothetical protein	NA	NA	NA	NA
WP_007372183.1\|105026_105305_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_007372182.1\|105494_106592_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_007372180.1\|107148_108219_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_007372179.1\|108229_108862_+	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_007372178.1\|108872_110291_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_007372177.1\|110365_112015_+	glycerone kinase	NA	NA	NA	NA
WP_007372176.1\|112118_112889_-	siderophore-interacting protein	NA	NA	NA	NA
WP_072146302.1\|113095_113287_-	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|113890_114871_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4
WP_057107713.1\|116107_117433_-	6-phospho-alpha-glucosidase	NA	NA	NA	NA
WP_064760475.1\|117604_118324_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_149006749.1\|118440_118773_+	PACE efflux transporter	NA	NA	NA	NA
WP_001310555.1\|118782_119799_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7
WP_001567358.1\|120599_121304_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.0e-138	99.6
WP_001752509.1\|121630_122131_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000019452.1\|122447_123428_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	4.4e-184	98.5
WP_000780222.1\|123705_123987_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|123967_124297_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2

DBSCAN-SWA_7

132215 : 162503

Salmonella_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003100847.1\|132215_132773_+	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_015062794.1\|132851_133856_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_047748389.1\|134269_134773_+	recombinase family protein	NA	NA	NA	NA
WP_003049965.1\|134885_137801_-\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-52	24.0
WP_052206738.1\|137896_138313_+	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_039262298.1\|139025_140051_+	2-hydroxyacid dehydrogenase	M1NSB9	Streptococcus_phage	4.4e-17	26.0
WP_166444224.1\|140043_140949_+	LysR family transcriptional regulator	A0A2H4J8I9	uncultured_Caudovirales_phage	7.5e-05	37.8
WP_001067855.1\|140894_141599_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_172740641.1\|143711_144065_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4J145	uncultured_Caudovirales_phage	2.4e-23	50.9
WP_172740642.1\|144112_144475_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_172740643.1\|144492_146244_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA
WP_172740644.1\|146293_147583_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	3.0e-172	73.8
WP_172740645.1\|147595_148021_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	4.0e-49	69.3
WP_172740646.1\|148051_150184_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_172740647.1\|150259_150805_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_172740648.1\|150813_151386_-	helix-turn-helix domain-containing protein	Q1MVP4	Enterobacteria_phage	9.7e-83	87.9
WP_172740649.1\|151549_154558_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	64.5
WP_032951326.1\|155594_156179_-	hypothetical protein	NA	NA	NA	NA
WP_072194352.1\|156230_156551_-	hypothetical protein	NA	NA	NA	NA
WP_032951323.1\|156660_157143_-	hypothetical protein	NA	NA	NA	NA
WP_032951321.1\|157240_157669_-	HNH endonuclease	C6ZR29	Salmonella_phage	5.8e-56	75.7
WP_007372169.1\|157687_158173_-	hypothetical protein	NA	NA	NA	NA
WP_009654998.1\|158286_159165_-	hypothetical protein	NA	NA	NA	NA
WP_007372167.1\|159176_160160_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	1.1e-73	46.5
WP_007372166.1\|160146_160377_-	hypothetical protein	NA	NA	NA	NA
WP_007372165.1\|160373_161195_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	3.4e-65	48.9
WP_071532006.1\|161345_162503_-	DNA polymerase III subunit beta	R9TRR6	Rhizobium_phage	1.2e-15	23.5

DBSCAN-SWA_8

172426 : 173497

unidentified_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372151.1\|172426_173497_-	phosphoadenosine phosphosulfate reductase family protein	H7BVI4	unidentified_phage	6.5e-40	28.4

DBSCAN-SWA_9

177053 : 215453

Morganella_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008786797.1\|177053_177455_-	hypothetical protein	Q1MVE8	Enterobacteria_phage	3.5e-47	69.9
WP_007372145.1\|178003_178495_+	hypothetical protein	NA	NA	NA	NA
WP_000217395.1\|178580_179072_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001333498.1\|179242_179500_-	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	8.3e-18	65.7
WP_127649377.1\|179788_180169_-	hypothetical protein	NA	NA	NA	NA
WP_007372144.1\|180481_181372_-	DNA replication protein	NA	NA	NA	NA
WP_009652912.1\|181521_182787_-	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	9.8e-144	60.6
WP_008786793.1\|182786_183203_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-36	54.7
WP_007372141.1\|183456_183960_+	hypothetical protein	NA	NA	NA	NA
WP_000156884.1\|184314_185337_-\|transposase	IS110-like element IS5708 family transposase	NA	NA	NA	NA
WP_081120970.1\|187929_188634_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.6e-138	99.1
WP_000612626.1\|189795_190143_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_007372134.1\|190139_190544_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	1.6e-68	97.8
WP_050998915.1\|191670_191931_-	hypothetical protein	NA	NA	NA	NA
WP_007372130.1\|192191_192371_-	hypothetical protein	A0A1B2IAL0	Erwinia_phage	6.8e-11	60.7
WP_007372127.1\|193490_193790_+	propanediol utilization microcompartment protein PduA	NA	NA	NA	NA
WP_007372126.1\|193789_194605_+	propanediol utilization microcompartment protein PduB	NA	NA	NA	NA
WP_035942271.1\|194629_197173_+	glycyl radical protein	NA	NA	NA	NA
WP_035942514.1\|197311_198232_+	glycyl-radical enzyme activating protein	NA	NA	NA	NA
WP_007372122.1\|198266_199094_+	aquaporin	NA	NA	NA	NA
WP_007372121.1\|199165_199456_+	BMC domain-containing protein	NA	NA	NA	NA
WP_007372120.1\|199483_200350_+	BMC domain-containing protein	NA	NA	NA	NA
WP_007372119.1\|200354_200990_+	phosphate propanoyltransferase	NA	NA	NA	NA
WP_050998913.1\|201003_201483_+	microcompartment protein PduM	NA	NA	NA	NA
WP_007372117.1\|201487_201766_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_007372116.1\|201798_202308_+	heme-binding protein	NA	NA	NA	NA
WP_007372115.1\|202304_203699_+	aldehyde dehydrogenase EutE	NA	NA	NA	NA
WP_007372114.1\|203714_204827_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_007372113.1\|205186_206047_+	PocR ligand-binding domain-containing protein	NA	NA	NA	NA
WP_145954163.1\|206375_207648_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-146	81.7
WP_001300563.1\|209649_210762_-\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_007372383.1\|210842_211046_-	hypothetical protein	NA	NA	NA	NA
WP_001567660.1\|211368_212391_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_007372381.1\|212414_215453_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	9.1e-297	53.8

DBSCAN-SWA_10

233557 : 234385

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000981293.1\|233557_234385_+	ParA family protein	J9QE36	Clostridium_phage	2.0e-12	27.4

DBSCAN-SWA_11

237866 : 241359

Macacine_betaherpesvirus(50.0%)

integrase,transposase

attL 237626:237638|attR 243080:243092

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
237626:237638	attL	NA	NA	NA	NA
WP_000174662.1\|237866_238631_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.9e-25	52.4
WP_007372351.1\|238650_239745_+	hypothetical protein	NA	NA	NA	NA
WP_172732022.1\|239878_240709_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|240654_241359_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
243080:243092	attR	NA	NA	NA	NA

DBSCAN-SWA_12

250043 : 258683

Salmonella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372267.1\|250043_250637_+	hypothetical protein	J9Q753	Salmonella_phage	1.4e-07	34.5
WP_007372268.1\|250729_250996_+	hypothetical protein	NA	NA	NA	NA
WP_007372269.1\|251104_251563_+	hypothetical protein	NA	NA	NA	NA
WP_007372270.1\|251598_252075_+	hypothetical protein	NA	NA	NA	NA
WP_007372271.1\|252149_252425_+	hypothetical protein	NA	NA	NA	NA
WP_007372272.1\|252539_252812_+	hypothetical protein	A0A192YCJ5	Morganella_phage	1.5e-09	37.2
WP_007372273.1\|252870_253203_-	hypothetical protein	NA	NA	NA	NA
WP_007372274.1\|253284_253578_+	hypothetical protein	NA	NA	NA	NA
WP_016241562.1\|253672_255745_+	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	1.7e-44	24.4
WP_016241561.1\|255765_256086_+	hypothetical protein	NA	NA	NA	NA
WP_024196082.1\|256173_256596_+	hypothetical protein	NA	NA	NA	NA
WP_024196081.1\|256868_257264_+	hypothetical protein	NA	NA	NA	NA
WP_016241560.1\|257445_257637_+	hypothetical protein	NA	NA	NA	NA
WP_007372278.1\|257767_258463_+	hypothetical protein	NA	NA	NA	NA
WP_032155220.1\|258485_258683_+	restriction alleviation protein, Lar family	A0A0U2QQP4	Escherichia_phage	2.6e-11	48.4

DBSCAN-SWA_13

263369 : 263987

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372289.1\|263369_263987_+	hypothetical protein	A0A076G6Q2	Escherichia_phage	4.1e-63	53.4

DBSCAN-SWA_14

273183 : 274026

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372307.1\|273183_274026_+	HNH endonuclease	G0X580	Salmonella_phage	1.8e-16	39.5

DBSCAN-SWA_15

277905 : 287345

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372313.1\|277905_278910_+	peptide transporter	A0A1B0V750	Salmonella_phage	3.0e-18	27.2
WP_008786583.1\|279033_279435_+	hypothetical protein	NA	NA	NA	NA
WP_007372314.1\|279406_281107_+	AAA family ATPase	A0A172JHZ0	Bacillus_phage	3.5e-96	36.7
WP_009653090.1\|281244_281469_+	hypothetical protein	NA	NA	NA	NA
WP_007372316.1\|281748_282066_+	hypothetical protein	NA	NA	NA	NA
WP_007372317.1\|282067_282817_+	hypothetical protein	NA	NA	NA	NA
WP_016241554.1\|282837_283524_+	hypothetical protein	NA	NA	NA	NA
WP_007372318.1\|283682_284858_+	ParB/RepB/Spo0J family partition protein	A0A088FQX6	Escherichia_phage	6.5e-17	31.3
WP_007372319.1\|285031_285553_+	hypothetical protein	NA	NA	NA	NA
WP_007372320.1\|285549_285918_+	hypothetical protein	NA	NA	NA	NA
WP_008786580.1\|285926_287345_+	replicative DNA helicase	O80281	Escherichia_phage	4.3e-188	73.6

DBSCAN-SWA_16

292373 : 294213

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007372328.1\|292373_293198_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.9e-18	61.1
WP_008786574.1\|293259_293919_+	hypothetical protein	NA	NA	NA	NA
WP_007372330.1\|293967_294213_+	hypothetical protein	S4TRP7	Salmonella_phage	2.8e-07	44.4

DBSCAN-SWA_17

300457 : 304367

Salmonella_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016241550.1\|300457_300883_+	hypothetical protein	A0A0K1YBA5	Cronobacter_phage	1.6e-26	42.8
WP_007372337.1\|301036_301756_+	HNH endonuclease	G0X580	Salmonella_phage	2.2e-07	39.5
WP_007372338.1\|303284_304367_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	1.1e-79	56.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP042534

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP042537

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP042535

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection