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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP044399 Moritella marina ATCC 15381 strain MP-1 chromosome, complete genome 3 crisprs cas3,TnsE_C,DEDDh,DinG,csa3,RT 0 2 2 0
NZ_CP044398 Moritella marina ATCC 15381 strain MP-1 plasmid unnamed1, complete sequence 1 crisprs NA 0 1 0 0

Results visualization

1. NZ_CP044399
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044399_1 74968-75080 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044399_2 1013664-1013774 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044399_3 2267637-2268024 Orphan NA
5 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP044399_3 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder 2267680-2267705 26 KJ019094 Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome 22081-22106 4 0.846
NZ_CP044399_3 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder 2267680-2267705 26 KJ019156 Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome 22081-22106 4 0.846
NZ_CP044399_3 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder 2267680-2267705 26 KJ019054 Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome 22081-22106 4 0.846
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 MN694284 Marine virus AFVG_250M474, complete genome 20112-20137 4 0.846
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_CP011829 Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence 44935-44960 5 0.808
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_CP032307 Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence 49947-49972 5 0.808
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_LR135289 Enterococcus faecium isolate E7199 plasmid 3 21750-21775 5 0.808
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_CP040704 Enterococcus faecium strain HOU503 plasmid p1, complete sequence 83821-83846 5 0.808
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_CP035137 Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence 194324-194349 5 0.808
NZ_CP044399_3 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder 2267818-2267843 26 NZ_CP035221 Enterococcus faecium strain SRCM103470 plasmid unnamed1 101565-101590 5 0.808

1. spacer 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder matches to KJ019094 (Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome) position: , mismatch: 4, identity: 0.846

cagtgtagctggtttcaatgatgtcg	CRISPR spacer
aagtgttgctggtttcaatgctgtca	Protospacer
 ***** ************* ****.

2. spacer 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 4, identity: 0.846

cagtgtagctggtttcaatgatgtcg	CRISPR spacer
aagtgttgctggtttcaatgctgtca	Protospacer
 ***** ************* ****.

3. spacer 3.1|2267680|26|NZ_CP044399|CRISPRCasFinder matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 4, identity: 0.846

cagtgtagctggtttcaatgatgtcg	CRISPR spacer
aagtgttgctggtttcaatgctgtca	Protospacer
 ***** ************* ****.

4. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to MN694284 (Marine virus AFVG_250M474, complete genome) position: , mismatch: 4, identity: 0.846

ttcaggtggtcttggtaataatgtga	CRISPR spacer
gacaggtggtcttggtaaaaatgtaa	Protospacer
  **************** *****.*

5. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

6. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

7. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_LR135289 (Enterococcus faecium isolate E7199 plasmid 3) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

8. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_CP040704 (Enterococcus faecium strain HOU503 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

9. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

10. spacer 3.3|2267818|26|NZ_CP044399|CRISPRCasFinder matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 5, identity: 0.808

ttcaggtggtcttggtaataatgtga	CRISPR spacer
agtaggtggtcttgttaataatttga	Protospacer
  .*********** ******* ***

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 360529 : 369251 8 Mycobacterium_phage(16.67%) tRNA NA
DBSCAN-SWA_2 1524700 : 1560905 42 Vibrio_phage(28.57%) head,terminase,portal,capsid,integrase,tail attL 1524586:1524606|attR 1561344:1561364
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP044398
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP044398_1 20525-20625 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP044398_1 1.1|20548|55|NZ_CP044398|CRISPRCasFinder 20548-20602 55 NZ_CP044398 Moritella marina ATCC 15381 strain MP-1 plasmid unnamed1, complete sequence 20548-20602 0 1.0

1. spacer 1.1|20548|55|NZ_CP044398|CRISPRCasFinder matches to NZ_CP044398 (Moritella marina ATCC 15381 strain MP-1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aatatctgaaccctaggtggaaattaattaataatcgcaagaactaacgccttac	CRISPR spacer
aatatctgaaccctaggtggaaattaattaataatcgcaagaactaacgccttac	Protospacer
*******************************************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage