CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP043033	Escherichia coli strain XDL chromosome, complete genome	3 crisprs	cas3,csa3,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	19	7
NZ_CP043035	Escherichia coli strain XDL plasmid pXDL-2, complete sequence	0 crisprs	NA	0	1
NZ_CP043038	Escherichia coli strain XDL plasmid pXDL-5, complete sequence	0 crisprs	NA	0	0
NZ_CP043036	Escherichia coli strain XDL plasmid pXDL-MCR-1.18, complete sequence	0 crisprs	NA	0	0
NZ_CP043037	Escherichia coli strain XDL plasmid pXDL-4, complete sequence	0 crisprs	NA	0	0
NZ_CP043034	Escherichia coli strain XDL plasmid pXDL-CTX-M-14, complete sequence	0 crisprs	NA	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP043033_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043033_1

97693-97831

Orphan

Consensus_repeat	Method
CTCATACTGACAGTCAGGTCACAGCAGTACGTGATGAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP043033_1

>merge|NZ_CP043033|1|97693-97831|CRISPRCasFinder
CTCATACTGACAGTCAGGTCACAGCAGTACGTGATGAACTGAAGGCAGAGGGAGACAGTCTGCGCGGTGAGATAGGCGGTGTATACAGAGATGCCCGTGCTCATACTGACAGTCAGGTTACAGCAGTACGTGATGAACT

>NZ_CP043033|1|1|97693-97831|CRISPRCasFinder
CTCATACTGACAGTCAGGTCACAGCAGTACGTGATGAACT	GAAGGCAGAGGGAGACAGTCTGCGCGGTGAGATAGGCGGTGTATACAGAGATGCCCGTG
CTCATACTGACAGTCAGGTTACAGCAGTACGTGATGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043033.1\|WP_001313270.1\|111306_113277_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273807
NZ_CP043033.1\|WP_000803221.1\|107646_108963_-\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	unknown	unknown	gnl\|CDD\|182876
NZ_CP043033.1\|WP_001313273.1\|109327_109435_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225216
NZ_CP043033.1\|WP_000760915.1\|99237_99576_-\|c-type-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|237508
NZ_CP043033.1\|WP_089581225.1\|109133_109319_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|225216
NZ_CP043033.1\|WP_000699820.1\|92456_92729_+\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP043033.1\|WP_000609007.1\|94959_95913_+\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP043033.1\|WP_001293447.1\|102491_103316_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP043033.1\|WP_001323513.1\|89870_90062_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043033.1\|WP_000551919.1\|103472_104816_-\|esterase-like-activity-of-phytase-family-protein	unknown	unknown	gnl\|CDD\|226675
NZ_CP043033.1\|WP_001101067.1\|94136_94967_+\|transketolase	unknown	unknown	gnl\|CDD\|226468
NZ_CP043033.1\|WP_072742973.1\|88986_89535_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371695
NZ_CP043033.1\|WP_001018808.1\|90657_91677_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380489
NZ_CP043033.1\|WP_000958492.1\|88475_88709_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP043033.1\|WP_131501864.1\|96175_96289_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP043033.1\|WP_001317566.1\|91934_92378_+\|PTS-transporter-subunit-EIIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP043033.1\|WP_085947917.1\|104935_106209_-\|IS3-like-element-IS2-family-transposase	unknown	unknown	gnl\|CDD\|181829
NZ_CP043033.1\|WP_000859647.1\|100080_100770_-\|N-acetylmannosamine-6-phosphate-2-epimerase	unknown	unknown	gnl\|CDD\|234907
NZ_CP043033.1\|WP_000983423.1\|100769_102326_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273923
NZ_CP043033.1\|WP_000470229.1\|92751_94140_+\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|171824

Protein	Function_ID	Function_description	E-value
NZ_CP043033.1\|WP_001313270.1\|111306_113277_+\|TonB-dependent-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	6.47462e-122
NZ_CP043033.1\|WP_000803221.1\|107646_108963_-\|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB	gnl\|CDD\|182876	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB.	0
NZ_CP043033.1\|WP_001313273.1\|109327_109435_+\|hypothetical-protein	gnl\|CDD\|225216	COG2337, MazF, Growth inhibitor [Signal transduction mechanisms].	0.00290214
NZ_CP043033.1\|WP_000760915.1\|99237_99576_-\|c-type-lysozyme-inhibitor	gnl\|CDD\|237508	PRK13791, PRK13791, c-type lysozyme inhibitor.	5.03241e-41
NZ_CP043033.1\|WP_089581225.1\|109133_109319_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|225216	COG2337, MazF, Growth inhibitor [Signal transduction mechanisms].	1.73653e-10
NZ_CP043033.1\|WP_000699820.1\|92456_92729_+\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.69739e-34
NZ_CP043033.1\|WP_000609007.1\|94959_95913_+\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	2.5376e-149
NZ_CP043033.1\|WP_001293447.1\|102491_103316_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.33873e-68
NZ_CP043033.1\|WP_000551919.1\|103472_104816_-\|esterase-like-activity-of-phytase-family-protein	gnl\|CDD\|226675	COG4222, COG4222, Uncharacterized protein conserved in bacteria [Function unknown].	2.13095e-154
NZ_CP043033.1\|WP_001101067.1\|94136_94967_+\|transketolase	gnl\|CDD\|226468	COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism].	2.51046e-131
NZ_CP043033.1\|WP_072742973.1\|88986_89535_+\|hypothetical-protein	gnl\|CDD\|371695	pfam11726, Inovirus_Gp2, Inovirus Gp2. Isoform G2P plays an essential role in viral DNA replication; it binds to the origin of replication and cleaves the dsDNA replicative form I (RFI) and becomes covalently bound to it via phosphotyrosine bond, generating the dsDNA replicative form II (RFII).	0.000222088
NZ_CP043033.1\|WP_001018808.1\|90657_91677_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380489	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding, which in turn changes the DNA binding affinity of the repressor.	2.34254e-103
NZ_CP043033.1\|WP_000958492.1\|88475_88709_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	1.37284e-23
NZ_CP043033.1\|WP_131501864.1\|96175_96289_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.46702e-08
NZ_CP043033.1\|WP_001317566.1\|91934_92378_+\|PTS-transporter-subunit-EIIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	4.34883e-36
NZ_CP043033.1\|WP_085947917.1\|104935_106209_-\|IS3-like-element-IS2-family-transposase	gnl\|CDD\|181829	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed.	0
NZ_CP043033.1\|WP_000859647.1\|100080_100770_-\|N-acetylmannosamine-6-phosphate-2-epimerase	gnl\|CDD\|234907	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase.	1.29598e-127
NZ_CP043033.1\|WP_000983423.1\|100769_102326_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273923	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for glucose transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, glucose-specific IIABC component" while the B. subtilus enzyme also contains an enzyme III domain which appears to act independently of the enzyme II domains. This family is most closely related to the N-acetylglucosamine-specific PTS enzymes (TIGR01998). [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP043033.1\|WP_000470229.1\|92751_94140_+\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|171824	PRK12996, ulaA, PTS ascorbate transporter subunit IIC.	0

>NZ_CP043033.1|WP_131501864.1|96175_96289_+|transposase
MVKLVLQPGASVARIAREHDINDNLLFKWLRLWQNVR
>NZ_CP043033.1|WP_000609007.1|94959_95913_+|transketolase-family-protein
MINLAPAGQKDSIEMRKVYADFIAQQSKNVSSVIALEADLMSSMAMDSVAQDYPDHVINCGIMEANVIGTAAGLALTGRKPFVHTFTAFASRRCFDQLFMSLDYQGANVKVIASDAGVAACHNGGTHMSFEDMGIVRGLAHSVVMEMTDAVMFSDILRQLVALEGFYWIRTIRKQAASIYAPGTTFTIGKGQVLREGTDVTLIANGIMVVEALEAARQLELAGVSVAVIDMFTLKPVDRMLIKNYAEKTGRIVTCENHSIHNGLGSAVAEVLVETCPVPMRRVGVKERYGQVGTQDFLQREYGLTAQDIVAAARELL
>NZ_CP043033.1|WP_001101067.1|94136_94967_+|transketolase
MNVKELTQFARDIRIQTLKSLTHLGFGHYGGSMSVVETLAVLYGAVMKIDPAAPDWPERDYFILSKGHAGPALYSTLALKGYFPLEELSTLNQNGTRLPSHPDRLKTCGVDSTTGSLGQGISIAGGMALSHKLAGRKNRVFCIVGDGELNEGQCWEAFQFIAHHRLNNLTVFVDWNKQQLDGQLDEIINPFDLEGKFRAFGFDVVTVKGDDIEGLLNVVKPVLPAEARPRVVILDSIKGQGVPCLEQLSNSHHLRLTEEMKGTLNETIRQLEAMHD
>NZ_CP043033.1|WP_000470229.1|92751_94140_+|PTS-ascorbate-transporter-subunit-IIC
MFILETLNFVVDILKVPAILVGLIALIGLVAQKKSFSDVVKGTIKTILGFIVLGGGATVLVGSLNPLGSMFEHAFNIQGIIPNNEAIVSIALEKYGASTALIMAFGMVANIIVARFTRLKYIFLTGHHTFYMACMIGVILTVAGFEGISLVFTGSLILGLVMAFFPALAQRYMKRITGNDDIAFGHFGTLGYVLSGWIGSVCGKGSRSTEEMNLPKNLSFLRDSSISISLTMMVIYLIMAISAGREFVESQFSGGQNYLVYAIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSEKLVPNARPALDCPVVYPYAPNAVLVGFLFSFFGGLVGLFLLGQMKLVLILPGVVPHFFTGAAAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLPVLGAIGFANTTFSDADFGAVGIVLGNLARYLSPFAITGLVVALFVLLVAWNIFASNKIAAKAQKKSGAKS
>NZ_CP043033.1|WP_000699820.1|92456_92729_+|PTS-sugar-transporter-subunit-IIB
MKIMAICGSGLGSSFMVEMNIKKVLKKMDIEAEVEHSDLSSATPGAADLFVMAKDIAASASVPESQLVVINNIIDINELETQLRNWLAKQ
>NZ_CP043033.1|WP_001317566.1|91934_92378_+|PTS-transporter-subunit-EIIA
MLNIWLSDSTIALRKNAATWQQALDICARPLLDAEIITTDYLSAIKTQHEKLGPYYVLAPGLAMPHARPEEGAKGLGLSLLKLEEGVSFHTEEFDPVDVIILLAAPDKHSHIEMISALAELFSSEKDLHELHQARNVEEIKKIISRF
>NZ_CP043033.1|WP_001018808.1|90657_91677_-|LacI-family-DNA-binding-transcriptional-regulator
MAITRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAAVNELGYMPNLTASALASASSHTIAMVVPNLAEAGCTEMFAGLQHVLQPAGYQIILAESRHRLEQEEKLLETLLASNIAAAILLSVEHNSTVRHLLKNASIPVIEIGAIRTDPIDINIGIDNVAAMFELTDMLVQRGYQNIGLLCANQEQWIFQQHLQGWYKAMLRHHMSPNRVINAALPPVFSTGASQLPEFLLAWPELDALVCVSDELACGVLYECQRRRIKVPDELAVVGFGDSDVSKVCQPSLTTMAVPHRKIGLEAGNVLLERIKEGNWSNQIFIEPCLCLRESC
>NZ_CP043033.1|WP_001323513.1|89870_90062_-|hypothetical-protein
MVTLTINRKPQGIFSKSPATPLQDKTDTAYKMKAGDQIPQLNDKQKPADKTPWRHDKTPEQKP
>NZ_CP043033.1|WP_072742973.1|88986_89535_+|hypothetical-protein
MQITEALLSAPGEIRRFVQQAVDHWPNLLAFHFTLHSAEGNINGQQIHAFCTSFYRQVHERITERNHTASPAPPVVLRWLREQHGGATMRCLLLFSQELFCHPRASVTVDEECSQLVDLLQQTWQVISAGGQCRVEKRFQVVRGDTSGQYVALKTVALSLGLPVVIAITHRPVQRCTLITAQ
>NZ_CP043033.1|WP_000958492.1|88475_88709_+|AlpA-family-transcriptional-regulator
MLTTTSHDSVLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA
>NZ_CP043033.1|WP_000760915.1|99237_99576_-|c-type-lysozyme-inhibitor
MKKYSSPVLALILVSNSMVSSAATKEISKTAYVCNGNKTMEVVYINTTAGNSYAVINQMDEMIPMQLMKMASGANYEAINKRYSYKLYTKGKKANLVEGNDNPVLSNCSSAE
>NZ_CP043033.1|WP_000859647.1|100080_100770_-|N-acetylmannosamine-6-phosphate-2-epimerase
MKTVLDSLKGKLIVSCQALENEPLHSPFIMSRMALAAAQGGAAGIRANSVADISAIKEIVSLPMIGIIKRDYPGSEVFITATLREVDELMTVEPEIIALDATARPRPGGQTLEELVTQIRARYPSILLMADIATVEEAVTAERLGFDCVGTTLYGYTAETARHVLAENDCGFLREVLKAVSVPVVAEGNVDTPECAARCLTLGAHTVVVGGAITRPQQITTRFIAAIAS
>NZ_CP043033.1|WP_000983423.1|100769_102326_-|PTS-transporter-subunit-EIIC
MMQMFSGASSGGWFEKAQRFGKSFMLPIAVLPAAGLLLGIGGALSNPNTLTAYPFLDADWLQAIFTIMTSAGSIVFANLSVLFAVGVAVGLAKSDKGTAGLASLLAFLVMNATINALLTLNGTLAHKNPASVGQGMTLGIQTLETGVFGGVVIGLVTCTLHSRFNKVSLPQFLGFFSGSRFVPIISSLAAIVVGAVMTVVWPHFQKLIFGLGDLVDATGYLGTLLYGFILRMLGPLGLHHIFYLPFWTTALGGSEIVNGQLVEGTQRIFFAQLADPNTQQFYAGTARFMSGRFITMMFGLLGACLAMYHTAKPENRKVVAGLLLSAALTSFLTGITEPVEFSFLFVAPVLYVIHAFFDGLAFMVAHILHITIGQTFSGGLIDFLLFGVLQGEAKTNWMYVPIVGIPWFFLYYFTFRYLINRFGWLTPGRENVTQVESGQPQSERAAAVIAGLGGKENLEEVDCCATRLRVTVKESSKVDEAALKVAGARGVIIRGNGVQVIYGPHVTIIKNEVEEILS
>NZ_CP043033.1|WP_001293447.1|102491_103316_+|MurR/RpiR-family-transcriptional-regulator
MSENENLLLRLRQSVDGYSRTQQKLGEFVLSDPAKVVYLTITELARESGTSEASVTRLCRTLGCKGYNEFKMALALDLRQVQFVEHGGDEIDNVVNESVQAIQDTAKLLDRALLEAAALALHQAQSVQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAGALTAKVGVMLLVELLTTSLIALDDQYSEVSQKTASATLPLLL
>NZ_CP043033.1|WP_000551919.1|103472_104816_-|esterase-like-activity-of-phytase-family-protein
MHNSKIRLAILVGCMALSANLWAKAQPVQATLAGHAILPAKSAVSTPKDAPGDLQQSGKYTSGKRVTELGSVAGKSAERLTGLSLPINGQPLQGHSGIKHMPDGTYWVLTDNGFGSKANSPDAMLYLNQYKIDFKDGSVVPLKTLFLHDPDKKVPFHIINESTELRYLTGSDFDPESFQFSDDALWIGDEFGPYLIKTDLNGKVLAVFDTEVDGKVVKSPDNPTLTLPSAPDGKLNFQVARSKGFEGMAISPDGSKLYPLLEGALWDGEQFENVDGKRYLRVLEFDAKQQAWTGRSWQYVLEDNQNAIGDFNMIDDTHGLVIERDNGEGTADKACVAGAPTNNCFSQVARFKRVYKIAFSDTNVGKPVEKLGYIDLMKIQDPNKLARKPLNDGVLTFPFFTIENVDVVDTNHIIVGNDNNFPFSSSRWPNMADDNEFILLDVKDFLK
>NZ_CP043033.1|WP_085947917.1|104935_106209_-|IS3-like-element-IS2-family-transposase
MIVLILVFRLVIGEQMIDVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRKQYQEGSLTAVAAGEQVVPASELAAAMKQIKELQRLLGKKTMENELLKEAVEYGRGKKVDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>NZ_CP043033.1|WP_000803221.1|107646_108963_-|sn-glycerol-3-phosphate-ABC-transporter-substrate-binding-protein-UgpB
MKPLHYTASALVLGLTLMGNAQAVTTIPFWHSMEGELGKEVNSLVQRFNAENPDYKIIPTYKGNYEESLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVYDVFKEAGINFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMKCGYSSGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLASIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADIATRQMLNKPSLPFTKGLRLGNMPQIRAIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS
>NZ_CP043033.1|WP_089581225.1|109133_109319_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MEFDPAVDSEIRKTCPAVIVSNDAANRNLARVVVVPLTSNTERVYPSEAVVTVGVRAAKRL
>NZ_CP043033.1|WP_001313273.1|109327_109435_+|hypothetical-protein
MAADKSCLKTHIGSLSKADMLSVEDAIKIHLGLLR
>NZ_CP043033.1|WP_001313270.1|111306_113277_+|TonB-dependent-receptor
MYMNVIRTVICTLIIVPVGLQAATSHSSMAKDTITIVATGNQNTVFETPSMVSVVTNDTPWSQNAVTSAGMLKGVAGLSQTGAGRTNGQTFNLRGYDKSGVLVLVDGVRQLSDMAKSSGTYLDPALVKRIEVVRGPNSSLYGSGGLGGVVDFRTADAADFLPPGETNGLSLWGNIASGDHSTGSGLTWFGKTGKTDALLSVIMRKRGNIYQSDGERAPNKEKPAALFAKGSVGITDSNKAGASLRLYRNNTTEPGNPTQTHGDSGLRDRKTVQNDVQFWYQYAPVDNSLINVKSTLYLSDITIKTNGHNKTAEWRNNRTSGVNVVNRSHTLIFPGAHQLSYGAEYYRQQQKPEGSATLYPEGNIDFTSLYFQDEMTMKSYPVNIIVGSRYDRYKSFNPRAGELKAERLSPRAAISVSPTDWLMMYGSISSAFRAPTMAEMYRDDVHFYRKGKPNYWVPNLNLKPENNITREIGAGIQLDGLLTDNDRLQLKGGYFGTDARNYIATRVDMKRMRSYSYNVSRARIWGWDMQGNYQSDYVDWVLSYNRTESMDASSREWLGSGNPDTLISDISIPVGHRGVYAGWRAELSASATHVKKGDSYQAGYAIHSFSLSYKPVSVKGFEASVTLDNAFNKLAMNGKGVPLSGRTVSLYTRYQW

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Crispr_ID: NZ_CP043033_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043033_2

1283198-1284507

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	PILER-CR
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	PILER-CR

21 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP043033_2

>merge|NZ_CP043033|2|1283198-1284507|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTGTTCCCTGCGCCAGCGGGGATAAACCGGTGACCATAAGGGCATTTCATACTGCCTTGCTGTGTTCCCTGCGCCAGCGGGGATAAACCGGTGAACGTGACAACGCCCGCGACAGAAACGTCGTGTTCCCTGCGCCAGCGGGGATAAACCGGGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGCGTGTTCCCTGCGCCAGCGGGGATAAACCGAAATTAATTTCGAAACGGGCGTTGATGGTGAAGTGTTCCCTGCGCCAGCGGGGATAAACCGGCTGGCGCACCTTACGCAAAAATAGACGTAAAGTGTTCCCTGCGCCAGCGGGGATAAACCGCCAGGGAGCGAAGCTGTGGCCATGCTGAAAGGGTGTTCCCTGCGCCAGCGGGGATAAACCGGGGTTCTATTTCCTCGGGATTTGCCGACACGCGTGTTCCCTGCGCCAGCGGGGATAAACCGGTCAACGCTGGTCAGGCGTGGTACTTCCTCCGGTGTTCCCTGCGCCAGCGGGGATAAACCGGCTGCCGCGCTTTCGGTGTGGGAGCAGTATGAGTGTTCCCTGCGCCAGCGGGGATAAACCGAAACTCCGTGGTGTAGTGCGTTTGTTGGTGCGGTGTTCCCTGCGCCAGCGGGGATAAACCGTTGGTATTAACGGGAATGTAGTCACTCCAGGAGTGTTCCCTGCGCCAGCGGGGATAAACCGGCGATCGTATTTTCCGCTACGTCGCTCAAATGGTGTTCCCTGCGCCAGCGGGGATAAACCGTCGTTGATGGTGTGATGAGTGTACAAAAAAAAGTGTTCCCTGCGCCAGCGGGGATAAACCGACGACTGAATCCGGCGAGGCTATCAACTGGCCGTGTTCCCTGCGCCAGCGGGGATAAACCGCCGCACACGTCGAGCTGGTGGGGATTAATGCTGTGTTCCCTGCGCCAGCGGGGATAAACCGCAGTAAACGTTCGCGCGTTCTCGCGCTCACGAGTGTTCCCTGCGCCAGCGGGGATAAACCCTCTGTGTATTCGCTACCAGCCAGCACCGGTACGTGTTCCCTGCGCCAGCGGGGATAAACCGCAGGGTAACTGGCTGCTCCTCAACCATTCCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTTTAGCGACCGGACCAGAGTACGCAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCGCCTTAAGTTCCTTAACTTCCTCTGTATGTGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTGATGAATTGGAAGTAACGGATAACCGCGTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP043033|2|1|1283198-1283471|PILER-CR
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	TGACCATAAGGGCATTTCATACTGCCTTGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	TGAACGTGACAACGCCCGCGACAGAAACGTC
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	GAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC
GTGTTCCCTGCGCCAGCGGGGATAAACCGA	AATTAATTTCGAAACGGGCGTTGATGGTGAA
GTGTTCCCTGCGCCAGCGGGGATAAACCGGCTGGCGCACCTTACGCAAAAATAGACGTAAAGTGTTCCCTGCGCCAGCGGGGATAAACCGCCAGGGAGCGAAGCTGTGGCCATGCTGAAAGGGTGTTCCCTGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TTGGTATTAACGGGAATGTAGTCACTCCAGGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCGATCGTATTTTCCGCTACGTCGCTCAAATG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ACGACTGAATCCGGCGAGGCTATCAACTGGCC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCGCACACGTCGAGCTGGTGGGGATTAATGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA
GTGTTCCCTGCGCCAGCGGGGATAAACCC	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTTTAGCGACCGGACCAGAGTACGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTGATGAATTGGAAGTAACGGATAACCGC


>NZ_CP043033|2|2|1283198-1284507|CRISPRCasFinder
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTGACCATAAGGGCATTTCATACTGCCTTGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTGAACGTGACAACGCCCGCGACAGAAACGTC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAATTAATTTCGAAACGGGCGTTGATGGTGAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGGCGCACCTTACGCAAAAATAGACGTAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TTGGTATTAACGGGAATGTAGTCACTCCAGGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCGATCGTATTTTCCGCTACGTCGCTCAAATG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ACGACTGAATCCGGCGAGGCTATCAACTGGCC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCGCACACGTCGAGCTGGTGGGGATTAATGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA
GTGTTCCCTGCGCCAGCGGGGATAAACCC	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTTTAGCGACCGGACCAGAGTACGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTGATGAATTGGAAGTAACGGATAACCGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP043033|2|1|1283198-1284507|CRT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTGACCATAAGGGCATTTCATACTGCCTTGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTGAACGTGACAACGCCCGCGACAGAAACGTC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAATTAATTTCGAAACGGGCGTTGATGGTGAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGGCGCACCTTACGCAAAAATAGACGTAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TTGGTATTAACGGGAATGTAGTCACTCCAGGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCGATCGTATTTTCCGCTACGTCGCTCAAATG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ACGACTGAATCCGGCGAGGCTATCAACTGGCC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCGCACACGTCGAGCTGGTGGGGATTAATGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA
GTGTTCCCTGCGCCAGCGGGGATAAACCC	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTTTAGCGACCGGACCAGAGTACGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTGATGAATTGGAAGTAACGGATAACCGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

>NZ_CP043033|2|2|1283564-1284507|PILER-CR
	TGACCATAAGGGCATTTCATACTGCCTTGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	TGAACGTGACAACGCCCGCGACAGAAACGTC
GTGTTCCCTGCGCCAGCGGGGATAAACCGG	GAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC
GTGTTCCCTGCGCCAGCGGGGATAAACCGA	AATTAATTTCGAAACGGGCGTTGATGGTGAA
GTGTTCCCTGCGCCAGCGGGGATAAACCGGCTGGCGCACCTTACGCAAAAATAGACGTAAAGTGTTCCCTGCGCCAGCGGGGATAAACCGCCAGGGAGCGAAGCTGTGGCCATGCTGAAAGGGTGTTCCCTGCGCCAGCGGGGATAAACCG	GGGTTCTATTTCCTCGGGATTTGCCGACACGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TTGGTATTAACGGGAATGTAGTCACTCCAGGA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	GCGATCGTATTTTCCGCTACGTCGCTCAAATG
GTGTTCCCTGCGCCAGCGGGGATAAACCG	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA
GTGTTCCCTGCGCCAGCGGGGATAAACCG	ACGACTGAATCCGGCGAGGCTATCAACTGGCC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CCGCACACGTCGAGCTGGTGGGGATTAATGCT
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA
GTGTTCCCTGCGCCAGCGGGGATAAACCC	TCTGTGTATTCGCTACCAGCCAGCACCGGTAC
GTGTTCCCTGCGCCAGCGGGGATAAACCG	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGGTTTTAGCGACCGGACCAGAGTACGCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTGATGAATTGGAAGTAACGGATAACCGC
GTGTTCCCTGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043033.1\|WP_001090361.1\|1286789_1288217_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP043033.1\|WP_000490422.1\|1284590_1285628_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP043033.1\|WP_000281457.1\|1281240_1281891_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP043033.1\|WP_000029333.1\|1278895_1279432_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP043033.1\|WP_000568936.1\|1290904_1291954_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP043033.1\|WP_001246104.1\|1288871_1289195_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP043033.1\|WP_001173673.1\|1288216_1288822_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP043033.1\|WP_001219237.1\|1290428_1290908_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP043033.1\|WP_001233967.1\|1274539_1277239_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP043033.1\|WP_000246153.1\|1289718_1290429_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP043033.1\|WP_000956460.1\|1274192_1274345_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP043033.1\|WP_000039841.1\|1273193_1273928_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP043033.1\|WP_000372108.1\|1285879_1286788_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP043033.1\|WP_000517476.1\|1289388_1289700_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP043033.1\|WP_000063171.1\|1282807_1283101_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP043033.1\|WP_000206454.1\|1279446_1280502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP043033.1\|WP_000085041.1\|1280512_1281259_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP043033.1\|WP_001295182.1\|1291934_1292696_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP043033.1\|WP_000144879.1\|1281887_1282811_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP043033.1\|WP_012311912.1\|1277336_1278899_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192

Protein	Function_ID	Function_description	E-value
NZ_CP043033.1\|WP_001090361.1\|1286789_1288217_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP043033.1\|WP_000490422.1\|1284590_1285628_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP043033.1\|WP_000281457.1\|1281240_1281891_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.1742e-89
NZ_CP043033.1\|WP_000029333.1\|1278895_1279432_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.04653e-28
NZ_CP043033.1\|WP_000568936.1\|1290904_1291954_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP043033.1\|WP_001246104.1\|1288871_1289195_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP043033.1\|WP_001173673.1\|1288216_1288822_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP043033.1\|WP_001219237.1\|1290428_1290908_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	5.30213e-104
NZ_CP043033.1\|WP_001233967.1\|1274539_1277239_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.17793e-179
NZ_CP043033.1\|WP_000246153.1\|1289718_1290429_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.85161e-121
NZ_CP043033.1\|WP_000956460.1\|1274192_1274345_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	4.96653e-13
NZ_CP043033.1\|WP_000039841.1\|1273193_1273928_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.50395e-137
NZ_CP043033.1\|WP_000372108.1\|1285879_1286788_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP043033.1\|WP_000517476.1\|1289388_1289700_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP043033.1\|WP_000063171.1\|1282807_1283101_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	3.83858e-65
NZ_CP043033.1\|WP_000206454.1\|1279446_1280502_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	6.93299e-153
NZ_CP043033.1\|WP_000085041.1\|1280512_1281259_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	1.07757e-46
NZ_CP043033.1\|WP_001295182.1\|1291934_1292696_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP043033.1\|WP_000144879.1\|1281887_1282811_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.17023e-156
NZ_CP043033.1\|WP_012311912.1\|1277336_1278899_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0

>NZ_CP043033.1|WP_000063171.1|1282807_1283101_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP043033.1|WP_000144879.1|1281887_1282811_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQVDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDLVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPELLGDSGHRGRSG
>NZ_CP043033.1|WP_000281457.1|1281240_1281891_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFAPELHTGQSLCFNLRANPTVCKAGKRHDLLMEAKRQVRGQAEGRNVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLCLGYGKSRAFGCGLMLIKPGAEA
>NZ_CP043033.1|WP_000085041.1|1280512_1281259_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAGVGIRRDDTECLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQEGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDALRNAYQQYQDRFHELKVSLPKLQDECWWEGEHDGLVSSKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE
>NZ_CP043033.1|WP_000206454.1|1279446_1280502_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATIMIEKGIEEKKAIEWAADIADYLGKAKKDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEDDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAAFKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP043033.1|WP_000029333.1|1278895_1279432_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIESQEWRFTALALVAAVAANVKAIDERQPFAAQLAAVMSEGRFTRLSAIKTPDDLLRQLRRAVKLLNGSVNLISLADDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP043033.1|WP_012311912.1|1277336_1278899_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDHRRWDDIWEDGLEAEKLREALLSLEHAFQFGPDSSSFMQDFEALTGDKVPVASLLPEIPGSQTTKFNKDHFIKRGVTEYLCPHCLALALFSLQLNAPAGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLIFPWLGPTRTSELVGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICDEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEMWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP043033.1|WP_001233967.1|1274539_1277239_+|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLADYFRQLGFADTEQAAQFFAWLLCWHDIGKFARSFQQLYLHPQLKVPEGARKNYEKISHSTLGYWLWNHYLSECQELLPSSSLSPRKLKRVMEMWMPMTTGHHGRPPERMDELDNFLPEDKGAARDFLLAIKVLFPLIEIPTFWDDDEGVELIKQLSWYISATVVLADWTGSSTRYFPRVAQTMDIEDYWQKTLVQAQNALTVFPPKAESAPFTGINTLFPFIENPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQTFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGIEGQQEAPFLEKDDYPWLTHVTKSDVHSHRVATRKDVERSVSVGWLHSEQECIARIASAVSQGKCIAWIRNSVDDAIQVHRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKEDCSQRAGKVLICTQVLEQSVDCDLDEMISDLAPVDLLIQRAGRLQRHIRDMNGQLKRDGKDERHPPELLILAPVWDDSPGDEWFGSAMRNSAFVYPDHGRIWLTQRVLREQGAIQMPHSARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLATCIDGVVKPYATGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCVEQRHDPEMANVILVTDDESCGYSATEGLIGKVG
>NZ_CP043033.1|WP_000956460.1|1274192_1274345_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCFTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP043033.1|WP_000039841.1|1273193_1273928_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIHPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP043033.1|WP_000490422.1|1284590_1285628_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDSEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP043033.1|WP_000372108.1|1285879_1286788_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP043033.1|WP_001090361.1|1286789_1288217_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP043033.1|WP_001173673.1|1288216_1288822_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP043033.1|WP_001246104.1|1288871_1289195_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP043033.1|WP_000517476.1|1289388_1289700_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP043033.1|WP_000246153.1|1289718_1290429_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVTRVVIAISPGDSRFAKLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP043033.1|WP_001219237.1|1290428_1290908_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYALGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP043033.1|WP_000568936.1|1290904_1291954_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEEVAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP043033.1|WP_001295182.1|1291934_1292696_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP043033_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP043033_3

4173295-4173427

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP043033_3

>merge|NZ_CP043033|3|4173295-4173427|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTCCTCACCAATATTGAAAACATGGCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGGATCACCAATATTGAAAG

>NZ_CP043033|3|3|4173295-4173427|PILER-CR
ATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGCTC
CTCACCAATATTGAAAA	CATGGCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGG
ATCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP043033.1\|WP_000349942.1\|4176492_4177710_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP043033.1\|WP_000624375.1\|4165302_4165782_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP043033.1\|WP_001445800.1\|4184840_4185989_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP043033.1\|WP_000600725.1\|4167828_4168359_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP043033.1\|WP_000998552.1\|4165102_4165282_-\|antitoxin	unknown	unknown	gnl\|CDD\|227619
NZ_CP043033.1\|WP_000122898.1\|4180236_4180827_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP043033.1\|WP_001361348.1\|4179445_4180231_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP043033.1\|WP_001248958.1\|4164536_4164986_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP043033.1\|WP_000692225.1\|4172433_4173204_-\|electron-transfer-flavoprotein	unknown	unknown	gnl\|CDD\|179569
NZ_CP043033.1\|WP_001287705.1\|4170140_4171427_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP043033.1\|WP_000377114.1\|4165973_4167836_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP043033.1\|WP_000333125.1\|4180945_4181341_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP043033.1\|WP_000787109.1\|4173676_4175191_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP043033.1\|WP_001361347.1\|4177783_4179337_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP043033.1\|WP_000203741.1\|4169856_4170144_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP043033.1\|WP_001183201.1\|4168466_4169798_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP043033.1\|WP_001091511.1\|4171477_4172419_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP043033.1\|WP_001126397.1\|4181601_4184823_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP043033.1\|WP_000347117.1\|4175221_4176364_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP043033.1\|WP_000543585.1\|4186444_4187266_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366

Protein	Function_ID	Function_description	E-value
NZ_CP043033.1\|WP_000349942.1\|4176492_4177710_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP043033.1\|WP_000624375.1\|4165302_4165782_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_CP043033.1\|WP_001445800.1\|4184840_4185989_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP043033.1\|WP_000600725.1\|4167828_4168359_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
NZ_CP043033.1\|WP_000998552.1\|4165102_4165282_-\|antitoxin	gnl\|CDD\|227619	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only].	8.89455e-07
NZ_CP043033.1\|WP_000122898.1\|4180236_4180827_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	4.46912e-141
NZ_CP043033.1\|WP_001361348.1\|4179445_4180231_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	2.14333e-178
NZ_CP043033.1\|WP_000692225.1\|4172433_4173204_-\|electron-transfer-flavoprotein	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	7.20746e-170
NZ_CP043033.1\|WP_001287705.1\|4170140_4171427_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP043033.1\|WP_000377114.1\|4165973_4167836_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP043033.1\|WP_000333125.1\|4180945_4181341_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
NZ_CP043033.1\|WP_000787109.1\|4173676_4175191_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP043033.1\|WP_001361347.1\|4177783_4179337_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP043033.1\|WP_000203741.1\|4169856_4170144_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP043033.1\|WP_001183201.1\|4168466_4169798_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.54841e-58
NZ_CP043033.1\|WP_001091511.1\|4171477_4172419_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP043033.1\|WP_001126397.1\|4181601_4184823_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP043033.1\|WP_000347117.1\|4175221_4176364_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP043033.1\|WP_000543585.1\|4186444_4187266_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	1.6349e-141

>NZ_CP043033.1|WP_000692225.1|4172433_4173204_-|electron-transfer-flavoprotein
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEGQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP043033.1|WP_001091511.1|4171477_4172419_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLSGKPDERMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP043033.1|WP_001287705.1|4170140_4171427_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEADAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFNGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP043033.1|WP_000203741.1|4169856_4170144_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP043033.1|WP_001183201.1|4168466_4169798_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISSTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP043033.1|WP_000600725.1|4167828_4168359_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_CP043033.1|WP_000377114.1|4165973_4167836_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLIENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_CP043033.1|WP_000624375.1|4165302_4165782_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP043033.1|WP_000998552.1|4165102_4165282_-|antitoxin
MNDKTSDFTSERDFVSRAHCVGLNPQATLQWTEVNEDAISALNELAEETGCFSDEYRKF
>NZ_CP043033.1|WP_001248958.1|4164536_4164986_+|hypothetical-protein
MRQINAGLNTREIILEMIDEADEPPFAEQRTWHRRRIAFLCECISVAVDYGFFCSVSQQSIMNITRMAEDVWITESKTTQLIDIWQQLKQLYPPETIPYTQQLPAKELLELLLSSPDDLRIIEIPDIIGDVFDDQTWIRLFKKHFADVI
>NZ_CP043033.1|WP_000787109.1|4173676_4175191_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP043033.1|WP_000347117.1|4175221_4176364_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP043033.1|WP_000349942.1|4176492_4177710_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMTKGKDPYYAGCGLYKCADGYIVMELVGITQIAECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP043033.1|WP_001361347.1|4177783_4179337_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDQQHRLREVMFYLNLSAQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP043033.1|WP_001361348.1|4179445_4180231_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKNYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP043033.1|WP_000122898.1|4180236_4180827_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLLVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEGNRPRLQGTTDVAPKR
>NZ_CP043033.1|WP_000333125.1|4180945_4181341_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP043033.1|WP_001126397.1|4181601_4184823_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAAEVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP043033.1|WP_001445800.1|4184840_4185989_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP043033.1|WP_000543585.1|4186444_4187266_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAIKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP043033_3	3.1\|4173312\|42\|NZ_CP043033\|PILER-CR	4173312-4173353	42	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141126	1	0.976
NZ_CP043033_3	3.2\|4173371\|40\|NZ_CP043033\|PILER-CR	4173371-4173410	40	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141067	2	0.95
NZ_CP043033_2	2.3\|1283350\|31\|NZ_CP043033\|PILER-CR	1283350-1283380	31	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1147088-1147118	5	0.839
NZ_CP043033_2	2.7\|1283349\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283349-1283380	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	1147087-1147118	6	0.812
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP019190	Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_01, complete sequence	127024-127055	6	0.812
NZ_CP043033_2	2.2\|1283289\|31\|NZ_CP043033\|PILER-CR	1283289-1283319	31	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	549628-549658	7	0.774
NZ_CP043033_2	2.3\|1283350\|31\|NZ_CP043033\|PILER-CR	1283350-1283380	31	NZ_CP051294	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence	300773-300803	7	0.774
NZ_CP043033_2	2.3\|1283350\|31\|NZ_CP043033\|PILER-CR	1283350-1283380	31	NZ_CP033363	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence	300760-300790	7	0.774
NZ_CP043033_2	2.7\|1283349\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283349-1283380	32	NZ_CP009882	Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence	40690-40721	7	0.781
NZ_CP043033_2	2.7\|1283349\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283349-1283380	32	NZ_CP051294	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence	300772-300803	7	0.781
NZ_CP043033_2	2.7\|1283349\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283349-1283380	32	NZ_CP033363	Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence	300759-300790	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP030198	Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence	4936-4967	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP030198	Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence	128920-128951	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP022035	Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed2, complete sequence	87665-87696	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP025255	Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence	50764-50795	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NC_019342	Salmonella sp. 14 plasmid p14-120, complete sequence	91854-91885	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NC_021871	Salmonella bongori N268-08 plasmid RM1, complete sequence	59417-59448	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP030197	Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence	74730-74761	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP053580	Salmonella enterica strain 94-0093 plasmid unnamed, complete sequence	113674-113705	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP022137	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed2, complete sequence	1091-1122	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP022118	Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence	88540-88571	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NC_019125	Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence	51741-51772	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NC_019125	Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence	57651-57682	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	171714-171745	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	170875-170906	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP023469	Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence	43010-43041	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	170888-170919	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	170885-170916	7	0.781
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP045959	Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence	196996-197027	7	0.781
NZ_CP043033_2	2.24\|1284386\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284386-1284417	32	NZ_CP024975	Escherichia coli strain CV839-15 plasmid pCV839-15-p1, complete sequence	66116-66147	7	0.781
NZ_CP043033_2	2.6\|1283288\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283288-1283319	32	NC_022995	Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence	549628-549659	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	1551934-1551965	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP044528	Klebsiella grimontii strain SS141 plasmid plamid_1, complete sequence	28753-28784	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP008789	Klebsiella oxytoca KONIH1 plasmid pKOX-137, complete sequence	128146-128177	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	LC549807	Klebsiella pneumoniae VNCKp115 plasmid pVNCKp115 DNA, complete sequence	66428-66459	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP026274	Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence	71946-71977	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP029143	Klebsiella michiganensis strain AR375 plasmid unnamed3, complete sequence	109947-109978	8	0.75
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP011634	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-228, complete sequence	138644-138675	8	0.75
NZ_CP043033_2	2.13\|1283715\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1283715-1283746	32	NZ_CP030127	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence	220383-220414	8	0.75
NZ_CP043033_2	2.17\|1283959\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1283959-1283990	32	MH133207	Acinetobacter phage vB_AbaM_B9, complete genome	87648-87679	8	0.75
NZ_CP043033_2	2.21\|1284203\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284203-1284234	32	NC_015170	Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence	58292-58323	8	0.75
NZ_CP043033_2	2.1\|1283228\|31\|NZ_CP043033\|PILER-CR	1283228-1283258	31	MN693415	Marine virus AFVG_25M102, complete genome	5687-5717	9	0.71
NZ_CP043033_2	2.4\|1283411\|31\|NZ_CP043033\|PILER-CR	1283411-1283441	31	MN937349	Stenotrophomonas phage vB_SmaS_BUCT548, complete genome	13859-13889	9	0.71
NZ_CP043033_2	2.7\|1283349\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283349-1283380	32	NZ_CP016293	Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence	126951-126982	9	0.719
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP041047	Citrobacter sp. CF971 plasmid pBM527-1, complete sequence	6870-6901	9	0.719
NZ_CP043033_2	2.10\|1283532\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283532-1283563	32	NZ_CP033743	Citrobacter freundii strain FDAARGOS_549 plasmid unnamed, complete sequence	70911-70942	9	0.719
NZ_CP043033_2	2.20\|1284142\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284142-1284173	32	NZ_CP032314	Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence	58546-58577	9	0.719
NZ_CP043033_2	2.23\|1284325\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284325-1284356	32	NC_020865	Cyanophage KBS-P-1A genomic sequence	41617-41648	9	0.719
NZ_CP043033_2	2.23\|1284325\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284325-1284356	32	HQ317389	Synechococcus phage S-RIP2 genomic sequence	22039-22070	9	0.719
NZ_CP043033_2	2.23\|1284325\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284325-1284356	32	KC011005	Synechococcus phage S-RIP2 isolate N_01_1007 photosystem II D1 protein (psbA) gene, complete cds	429-460	9	0.719
NZ_CP043033_2	2.24\|1284386\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284386-1284417	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1856586-1856617	9	0.719
NZ_CP043033_2	2.24\|1284386\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284386-1284417	32	MN234187	Mycobacterium phage DyoEdafos, complete genome	33938-33969	9	0.719
NZ_CP043033_2	2.24\|1284386\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284386-1284417	32	MG603697	Vibrio phage Vp_R1, complete genome	41873-41904	9	0.719
NZ_CP043033_2	2.5\|1283227\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283227-1283258	32	MN693415	Marine virus AFVG_25M102, complete genome	5687-5718	10	0.688
NZ_CP043033_2	2.8\|1283410\|32\|NZ_CP043033\|CRISPRCasFinder,CRT	1283410-1283441	32	MN937349	Stenotrophomonas phage vB_SmaS_BUCT548, complete genome	13858-13889	10	0.688
NZ_CP043033_2	2.15\|1283837\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1283837-1283868	32	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	298322-298353	10	0.688
NZ_CP043033_2	2.22\|1284264\|32\|NZ_CP043033\|CRISPRCasFinder,CRT,PILER-CR	1284264-1284295	32	NZ_LN831184	Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence	302156-302187	11	0.656

1. spacer 3.1|4173312|42|NZ_CP043033|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976

tgtcacacgcagataaatccaactttcaatattgttaagctc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.**

2. spacer 3.2|4173371|40|NZ_CP043033|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.95

catggcgtagcaaaaagaaattttcaatattgttttatgg	CRISPR spacer
catggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
********** *********************.*******

3. spacer 2.3|1283350|31|NZ_CP043033|PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.839

gaagaagcggtaaagcgggttccagttcagc--	CRISPR spacer
gaaggcgcggtaaagcgggttccgg--cagcgg	Protospacer
****. *****************.*  ****

4. spacer 2.7|1283349|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ggaagaagcggtaaagcgggttccagttcagc--	CRISPR spacer
tgaaggcgcggtaaagcgggttccgg--cagcgg	Protospacer
 ****. *****************.*  ****

5. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP019190 (Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673 plasmid pATCCBAA1673_01, complete sequence) position: , mismatch: 6, identity: 0.812

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccggaggccgatgcggtggccatgctgaaagg	Protospacer
**.*.*. *** ** *****************

6. spacer 2.2|1283289|31|NZ_CP043033|PILER-CR matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 7, identity: 0.774

tgaacgtgacaacgcccgcgacagaaacgtc	CRISPR spacer
ctaaaaagacaagggccgcgacagaaacgtc	Protospacer
. ** . ***** * ****************

7. spacer 2.3|1283350|31|NZ_CP043033|PILER-CR matches to NZ_CP051294 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence) position: , mismatch: 7, identity: 0.774

gaagaagcggtaaagcgggttccagttcagc	CRISPR spacer
gccgaagcggtcgagcgggttccagtctggc	Protospacer
*  ******** .*************...**

8. spacer 2.3|1283350|31|NZ_CP043033|PILER-CR matches to NZ_CP033363 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence) position: , mismatch: 7, identity: 0.774

gaagaagcggtaaagcgggttccagttcagc	CRISPR spacer
gccgaagcggtcgagcgggttccagtctggc	Protospacer
*  ******** .*************...**

9. spacer 2.7|1283349|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP009882 (Pantoea sp. PSNIH1 plasmid pPSP-26e, complete sequence) position: , mismatch: 7, identity: 0.781

ggaagaagcggtaaagcgggttccagttcagc--	CRISPR spacer
ggaagatccggtaaagcgggttcagg--cggctg	Protospacer
******  *************** .*  *.**

10. spacer 2.7|1283349|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP051294 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077A, complete sequence) position: , mismatch: 7, identity: 0.781

ggaagaagcggtaaagcgggttccagttcagc	CRISPR spacer
ggccgaagcggtcgagcgggttccagtctggc	Protospacer
**  ******** .*************...**

11. spacer 2.7|1283349|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP033363 (Mesorhizobium sp. NZP2077 plasmid pMSNZP2077NSa, complete sequence) position: , mismatch: 7, identity: 0.781

ggaagaagcggtaaagcgggttccagttcagc	CRISPR spacer
ggccgaagcggtcgagcgggttccagtctggc	Protospacer
**  ******** .*************...**

12. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP030198 (Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

13. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP030198 (Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

14. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP022035 (Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 plasmid punamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

15. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP025255 (Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggccatgctcaaagg	Protospacer
**.** . .** ************** *****

16. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NC_019342 (Salmonella sp. 14 plasmid p14-120, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

17. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NC_021871 (Salmonella bongori N268-08 plasmid RM1, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

18. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP030197 (Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

19. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP053580 (Salmonella enterica strain 94-0093 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

20. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP022137 (Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

21. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

22. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NC_019125 (Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgcagatgcagtggccatgctgaaagg	Protospacer
**.** .  ** ** *****************

23. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NC_019125 (Salmonella enterica subsp. salamae plasmid pSGSC3045-121, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

24. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

25. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

26. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP023469 (Salmonella enterica subsp. enterica strain BAA-1586 plasmid pSalMiami, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

27. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

28. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccgggtgctgatgctgtggctatgctgaaagg	Protospacer
**.** . .** ********.***********

29. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 7, identity: 0.781

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccggaaaatgaggcggtggccatgctgaaagg	Protospacer
**.*..*..**.** *****************

30. spacer 2.24|1284386|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024975 (Escherichia coli strain CV839-15 plasmid pCV839-15-p1, complete sequence) position: , mismatch: 7, identity: 0.781

ttgcgccttaagttccttaacttcctctgtat	CRISPR spacer
ttgcgccttaagctccttaacctctccggcgt	Protospacer
************.********.**..* *..*

31. spacer 2.6|1283288|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NC_022995 (Burkholderia sp. M701 plasmid pM7012 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

gtgaacgtgacaacgcccgcgacagaaacgtc	CRISPR spacer
cctaaaaagacaagggccgcgacagaaacgtc	Protospacer
 . ** . ***** * ****************

32. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
ccagggagcgaagctgtggcgatttatccaag	Protospacer
******************** ** .    *.*

33. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP044528 (Klebsiella grimontii strain SS141 plasmid plamid_1, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

34. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP008789 (Klebsiella oxytoca KONIH1 plasmid pKOX-137, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

35. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to LC549807 (Klebsiella pneumoniae VNCKp115 plasmid pVNCKp115 DNA, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

36. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP026274 (Klebsiella oxytoca strain KONIH4 plasmid pKPC-4b66, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

37. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP029143 (Klebsiella michiganensis strain AR375 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

38. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP011634 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-228, complete sequence) position: , mismatch: 8, identity: 0.75

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
cccgaagcggatgcggtggccatgctgaaagg	Protospacer
** *...  ** ** *****************

39. spacer 2.13|1283715|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030127 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gctgccgcgctttcggtgtgggagcagtatga	CRISPR spacer
gtcgccgagcattcggtgtgggagcagcgggt	Protospacer
*..**** ** ****************.. *

40. spacer 2.17|1283959|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to MH133207 (Acinetobacter phage vB_AbaM_B9, complete genome) position: , mismatch: 8, identity: 0.75

tcgttgatggtgtgatgagtgtacaaaaaaaa	CRISPR spacer
ttgagcttggtgtgattagtgtacaagaaaat	Protospacer
*.*    ********* *********.****

41. spacer 2.21|1284203|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NC_015170 (Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequence) position: , mismatch: 8, identity: 0.75

tctgtgtattcgctaccagccagcaccggtac	CRISPR spacer
gccttgcattcgctaccagccagcgccgaagc	Protospacer
 *. **.*****************.***. .*

42. spacer 2.1|1283228|31|NZ_CP043033|PILER-CR matches to MN693415 (Marine virus AFVG_25M102, complete genome) position: , mismatch: 9, identity: 0.71

tgaccataagggcatttcatactgccttgct	CRISPR spacer
acaccataagggcgtttcattctgcgatata	Protospacer
  ***********.****** ****  *..

43. spacer 2.4|1283411|31|NZ_CP043033|PILER-CR matches to MN937349 (Stenotrophomonas phage vB_SmaS_BUCT548, complete genome) position: , mismatch: 9, identity: 0.71

aattaatttcgaaacgggcgttgatggtgaa	CRISPR spacer
gggttcgttcgaacagggcgttgatggtgag	Protospacer
.. *   ******  ***************.

44. spacer 2.7|1283349|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP016293 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

ggaagaagcggtaaagcgggttccagttcagc	CRISPR spacer
ggaagaagcggccaagcgggttctgatagaag	Protospacer
***********. **********...*  *.

45. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP041047 (Citrobacter sp. CF971 plasmid pBM527-1, complete sequence) position: , mismatch: 9, identity: 0.719

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
gacggcgctgaggcggtggccatgctgaaagg	Protospacer
   ** . .**.** *****************

46. spacer 2.10|1283532|32|NZ_CP043033|CRISPRCasFinder,CRT matches to NZ_CP033743 (Citrobacter freundii strain FDAARGOS_549 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ccagggagcgaagctgtggccatgctgaaagg	CRISPR spacer
tccgaagcggatgcggtggccatgctgaaagg	Protospacer
.* *...  ** ** *****************

47. spacer 2.20|1284142|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032314 (Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence) position: , mismatch: 9, identity: 0.719

cagtaaacgttcgcgcgttctcgcgctcacga	CRISPR spacer
cgggctctattcgctcgttctcgcgcgcacga	Protospacer
*.*    ..***** *********** *****

48. spacer 2.23|1284325|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NC_020865 (Cyanophage KBS-P-1A genomic sequence) position: , mismatch: 9, identity: 0.719

gggttttagcgaccggaccagagtacgcaaca	CRISPR spacer
tcgcagcggcgacaggagcagagtacgcaaca	Protospacer
  *.  ..***** *** **************

49. spacer 2.23|1284325|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to HQ317389 (Synechococcus phage S-RIP2 genomic sequence) position: , mismatch: 9, identity: 0.719

gggttttagcgaccggaccagagtacgcaaca	CRISPR spacer
tcgcagcggcgacaggagcagagtacgcaaca	Protospacer
  *.  ..***** *** **************

50. spacer 2.23|1284325|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to KC011005 (Synechococcus phage S-RIP2 isolate N_01_1007 photosystem II D1 protein (psbA) gene, complete cds) position: , mismatch: 9, identity: 0.719

gggttttagcgaccggaccagagtacgcaaca	CRISPR spacer
tcgcagcggcgacaggagcagagtacgcaaca	Protospacer
  *.  ..***** *** **************

51. spacer 2.24|1284386|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 9, identity: 0.719

ttgcgccttaagttccttaacttcctctgtat	CRISPR spacer
gagcgccttaagttccttcgcttcctcgacgg	Protospacer
  **************** .******* ...

52. spacer 2.24|1284386|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to MN234187 (Mycobacterium phage DyoEdafos, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgccttaagttccttaacttcctctgtat	CRISPR spacer
cgcggccttaagttcgttaactgcctcagcgt	Protospacer
.   *********** ****** **** *..*

53. spacer 2.24|1284386|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to MG603697 (Vibrio phage Vp_R1, complete genome) position: , mismatch: 9, identity: 0.719

ttgcgcct----taagttccttaacttcctctgtat	CRISPR spacer
----gtttcggataatttccttagcttcctctgtaa	Protospacer
    *..*    *** *******.***********

54. spacer 2.5|1283227|32|NZ_CP043033|CRISPRCasFinder,CRT matches to MN693415 (Marine virus AFVG_25M102, complete genome) position: , mismatch: 10, identity: 0.688

gtgaccataagggcatttcatactgccttgct	CRISPR spacer
tacaccataagggcgtttcattctgcgatata	Protospacer
   ***********.****** ****  *..

55. spacer 2.8|1283410|32|NZ_CP043033|CRISPRCasFinder,CRT matches to MN937349 (Stenotrophomonas phage vB_SmaS_BUCT548, complete genome) position: , mismatch: 10, identity: 0.688

aaattaatttcgaaacgggcgttgatggtgaa	CRISPR spacer
tgggttcgttcgaacagggcgttgatggtgag	Protospacer
 .. *   ******  ***************.

56. spacer 2.15|1283837|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 10, identity: 0.688

ttggtattaacgggaatgtagtcactccagga	CRISPR spacer
cacagagaaacgtcaatgtagtcactccaggc	Protospacer
.  . *  ****  *****************

57. spacer 2.22|1284264|32|NZ_CP043033|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN831184 (Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence) position: , mismatch: 11, identity: 0.656

cagggtaactggctgctcctcaaccattccgc	CRISPR spacer
gtcatctactggctgcgcctcaatcattccag	Protospacer
   . . ********* ******.******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

79809 : 126299

Stx2-converting_phage(43.75%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_151577491.1\|79809_81083_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.0e-176	98.7
WP_000792543.1\|81231_83280_+	TonB-dependent siderophore receptor IreA	A0A0P0I887	Acinetobacter_phage	1.1e-11	33.5
WP_025492107.1\|85840_86032_+	hypothetical protein	A0A0N7BTS3	Escherichia_phage	2.4e-06	96.2
WP_001126822.1\|87010_87577_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_001593693.1\|87834_88452_+	hypothetical protein	NA	NA	NA	NA
WP_000958492.1\|88475_88709_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_072742973.1\|88986_89535_+	hypothetical protein	NA	NA	NA	NA
WP_001323513.1\|89870_90062_-	hypothetical protein	NA	NA	NA	NA
WP_001018808.1\|90657_91677_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	4.3e-17	25.8
WP_001317566.1\|91934_92378_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_000699820.1\|92456_92729_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000470229.1\|92751_94140_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_001101067.1\|94136_94967_+	transketolase	NA	NA	NA	NA
WP_000609007.1\|94959_95913_+	transketolase family protein	NA	NA	NA	NA
WP_131501864.1\|96175_96289_+\|transposase	transposase	Q6H9S5	Enterobacteria_phage	3.4e-08	71.4
WP_039005722.1\|97139_98399_+	immunoglobulin-binding protein	Q9MCI8	Enterobacteria_phage	5.2e-20	76.1
WP_000760915.1\|99237_99576_-	c-type lysozyme inhibitor	NA	NA	NA	NA
WP_000859647.1\|100080_100770_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_000983423.1\|100769_102326_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_001293447.1\|102491_103316_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_000551919.1\|103472_104816_-	esterase-like activity of phytase family protein	NA	NA	NA	NA
WP_085947917.1\|104935_106209_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.4e-177	99.3
WP_000803221.1\|107646_108963_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA
WP_089581225.1\|109133_109319_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	NA	NA	NA
WP_001313273.1\|109327_109435_+	hypothetical protein	NA	NA	NA	NA
WP_001313270.1\|111306_113277_+	TonB-dependent receptor	NA	NA	NA	NA
WP_000977396.1\|113295_114087_+	DUF4198 domain-containing protein	NA	NA	NA	NA
WP_000381395.1\|114410_115982_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_000624622.1\|116001_116349_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001682408.1\|116348_117026_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_001171523.1\|117373_117754_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	7.1e-66	99.2
WP_000612556.1\|117750_118098_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.8e-61	99.1
WP_072742968.1\|118193_119786_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.3e-181	63.2
WP_000624717.1\|119816_120167_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	1.2e-40	66.4
WP_000422741.1\|120163_120589_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_001360336.1\|122801_126299_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	2.7e-98	34.8

DBSCAN-SWA_2

977538 : 1010081

Escherichia_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085949152.1\|977538_978812_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-172	96.7
WP_000968123.1\|979564_980443_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA
WP_001101720.1\|980439_981297_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA
WP_000983725.1\|981293_982121_-	iron/manganese ABC transporter ATP-binding protein SitB	G9BWD6	Planktothrix_phage	1.9e-10	28.9
WP_000555617.1\|982120_983035_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA
WP_085948178.1\|985651_986864_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000823671.1\|987214_987739_+	superoxide dismutase family protein	Q9MC02	Salmonella_phage	3.0e-62	62.4
WP_001470144.1\|987867_988092_-	hypothetical protein	NA	NA	NA	NA
WP_024211228.1\|989340_989661_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_032303532.1\|992128_992500_+	hypothetical protein	NA	NA	NA	NA
WP_072157239.1\|996378_997161_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-137	98.5
WP_000248798.1\|997787_998108_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	8.8e-33	70.9
WP_000952434.1\|998173_999346_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	1.4e-224	97.7
WP_151577500.1\|1001950_1003210_+	N-acetylmuramoyl-L-alanine amidase AmiC	Q5YA51	Bacillus_phage	2.3e-15	27.8
WP_000881114.1\|1006853_1007246_-\|transposase	transposase	NA	NA	NA	NA
WP_001354603.1\|1009049_1010081_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1024482 : 1075893

Stx2-converting_phage(27.27%)

transposase,integrase,tRNA

attL 1043449:1043464|attR 1082396:1082411

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000381395.1\|1024482_1026054_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_000624622.1\|1026073_1026421_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001682408.1\|1026420_1027098_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_085948178.1\|1027689_1028902_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.7e-169	99.7
WP_000907124.1\|1029400_1029577_-	protein convertase	NA	NA	NA	NA
WP_001066120.1\|1029652_1029973_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_050554504.1\|1029990_1030287_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_151577503.1\|1031043_1032581_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_001298859.1\|1032770_1034312_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|1034326_1035073_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.5e-24	31.6
WP_001470157.1\|1036874_1037498_-	hypothetical protein	NA	NA	NA	NA
WP_085948260.1\|1037680_1038893_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	7.6e-170	100.0
WP_000594406.1\|1039178_1039304_-	hypothetical protein	NA	NA	NA	NA
WP_021541778.1\|1039346_1040465_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000179692.1\|1040476_1041694_-	MFS transporter	NA	NA	NA	NA
1043449:1043464	attL	NA	NA	NA	NA
WP_072644955.1\|1043534_1044638_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_077250549.1\|1045038_1045209_-\|integrase	integrase	NA	NA	NA	NA
WP_077250550.1\|1045446_1046184_+	porin family protein	NA	NA	NA	NA
WP_000785681.1\|1046603_1047500_+	WYL domain-containing protein	NA	NA	NA	NA
WP_001207400.1\|1047548_1048628_+	hypothetical protein	NA	NA	NA	NA
WP_151577504.1\|1048674_1050246_+	cobalamin adenosyltransferase	NA	NA	NA	NA
WP_000766273.1\|1050242_1050509_+	hypothetical protein	NA	NA	NA	NA
WP_001238009.1\|1050648_1050846_+	hypothetical protein	NA	NA	NA	NA
WP_024179174.1\|1050898_1052572_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_151577590.1\|1052715_1053057_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|1053107_1053812_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_023181050.1\|1054109_1055645_+\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	6.6e-102	40.7
WP_001282653.1\|1055661_1056417_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	6.2e-45	43.8
WP_100620379.1\|1056413_1057223_-	hypothetical protein	NA	NA	NA	NA
WP_001037798.1\|1058487_1059882_-	carbohydrate porin	NA	NA	NA	NA
WP_000813678.1\|1060076_1061507_-	glycoside hydrolase family 32 protein	NA	NA	NA	NA
WP_001083368.1\|1061506_1062784_-	MFS transporter	NA	NA	NA	NA
WP_000253907.1\|1062846_1064973_-	alpha-galactosidase	NA	NA	NA	NA
WP_000053331.1\|1065068_1066079_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001218742.1\|1066228_1067413_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.7e-121	53.1
WP_000234514.1\|1067770_1068478_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_032152714.1\|1068875_1071011_+	ornithine decarboxylase	NA	NA	NA	NA
WP_001049791.1\|1071056_1072313_-	nucleoside permease NupG	NA	NA	NA	NA
WP_001389464.1\|1072514_1073594_-	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA
WP_000091700.1\|1073657_1073933_-	oxidative damage protection protein	NA	NA	NA	NA
WP_001389465.1\|1073960_1075013_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000786911.1\|1075173_1075893_+\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
1082396:1082411	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1668298 : 1681220

Escherichia_phage(83.33%)

integrase

attL 1661109:1661123|attR 1670932:1670946

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1661109:1661123	attL	NA	NA	NA	NA
WP_001224626.1\|1668298_1668868_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	7.0e-49	52.2
WP_001181154.1\|1669616_1670246_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	5.4e-119	99.0
WP_000243052.1\|1670563_1671184_+	LuxR family transcriptional regulator	A0A2L1IV08	Escherichia_phage	1.3e-117	99.0
1670932:1670946	attR	NA	NA	NA	NA
WP_012311963.1\|1671208_1679122_+	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV38	Escherichia_phage	0.0e+00	93.4
WP_000100042.1\|1679169_1679700_+	hypothetical protein	A0A2L1IV11	Escherichia_phage	3.3e-85	97.7
WP_000368131.1\|1680287_1681220_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.2e-167	100.0

DBSCAN-SWA_5

2970899 : 3022271

Escherichia_phage(45.83%)

protease,tail,integrase,portal,capsid,transposase,head,terminase,holin

attL 2999160:2999175|attR 3029195:3029210

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001118619.1\|2970899_2971823_+\|transposase	IS5-like element IS903B family transposase	Q9MCT5	Escherichia_phage	2.2e-177	100.0
WP_000218214.1\|2972821_2973673_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826742.1\|2973779_2975138_-	two-component system sensor histidine kinase HprS	Q8QKV7	Ectocarpus_siliculosus_virus	8.7e-05	20.5
WP_001339045.1\|2975137_2975809_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	5.4e-32	35.2
WP_000920132.1\|2975941_2976355_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_151577541.1\|2976463_2977468_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001241112.1\|2977468_2978104_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_023142107.1\|2978339_2979011_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_001079074.1\|2979353_2979884_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.9e-56	100.0
WP_021549777.1\|2980864_2981152_-	hypothetical protein	NA	NA	NA	NA
WP_000235970.1\|2981194_2982235_-\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	4.1e-156	81.4
WP_000654145.1\|2982244_2982526_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	2.4e-18	50.0
WP_151577542.1\|2982525_2984904_-\|tail	phage tail protein	A0A1X7QGG5	Escherichia_phage	3.5e-187	76.8
WP_001228253.1\|2984968_2985568_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	4.0e-103	93.0
WP_151577543.1\|2985635_2989115_-	DUF1983 domain-containing protein	A0A291AWT4	Escherichia_phage	0.0e+00	89.9
WP_012311734.1\|2989175_2989823_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.8e-110	96.3
WP_012311596.1\|2989720_2990464_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.9e-143	93.5
WP_001152420.1\|2990468_2991167_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	9.9e-130	96.1
WP_001330090.1\|2991166_2991523_-\|tail	tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.8e-40	66.7
WP_000224017.1\|2991500_2994728_-\|tail	phage tail tape measure protein	A0A1B5FPE2	Escherichia_phage	0.0e+00	95.1
WP_063101268.1\|2994773_2995034_-	DUF4035 domain-containing protein	A0A1B5FP87	Escherichia_phage	7.1e-41	98.8
WP_001312914.1\|2995075_2995462_-\|tail	tail assembly protein	A0A1B5FP91	Escherichia_phage	6.8e-64	100.0
WP_000097533.1\|2995461_2996166_-	hypothetical protein	A0A1B5FP82	Escherichia_phage	1.5e-117	96.2
WP_001209399.1\|2996225_2996570_-	DUF3168 domain-containing protein	A0A1B5FP84	Escherichia_phage	4.2e-57	100.0
WP_001312916.1\|2996566_2997016_-	HK97 gp10 family phage protein	S4TR46	Salmonella_phage	7.9e-64	80.5
WP_001147820.1\|2997012_2997351_-\|head	phage head closure protein	A0A1B5FP90	Escherichia_phage	1.6e-56	99.1
WP_000983037.1\|2997359_2997665_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	9.2e-40	100.0
WP_000601355.1\|2997676_2997865_-	hypothetical protein	A0A1B5FP98	Escherichia_phage	7.2e-27	100.0
WP_151577544.1\|2997916_2999122_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	5.0e-222	98.8
WP_001193631.1\|2999136_2999787_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.5e-119	100.0
2999160:2999175	attL	NA	NA	NA	NA
WP_000466247.1\|2999764_3001006_-\|portal	phage portal protein	U5P411	Shigella_phage	5.9e-242	99.5
WP_000478567.1\|3001005_3001188_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	1.1e-24	96.7
WP_001140891.1\|3001199_3002957_-\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	99.3
WP_001317918.1\|3002956_3003439_-\|terminase	phage terminase small subunit P27 family	A0A1B5FPA0	Escherichia_phage	5.7e-84	97.5
WP_001111090.1\|3003587_3003938_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.3e-65	98.3
WP_001532432.1\|3004076_3004616_+	hypothetical protein	NA	NA	NA	NA
WP_001100260.1\|3004621_3004888_-	hypothetical protein	NA	NA	NA	NA
WP_001228685.1\|3005105_3005291_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	6.4e-20	80.3
WP_000992100.1\|3005507_3006041_-	lysozyme	Q08J98	Stx2-converting_phage	3.6e-100	94.4
WP_021546095.1\|3006104_3006455_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.2e-37	95.2
WP_000839572.1\|3006459_3006675_-\|holin	holin	M1FN85	Enterobacteria_phage	5.3e-34	98.6
WP_021546097.1\|3007487_3008177_-	antitermination protein Q	I6PDF8	Cronobacter_phage	3.1e-59	50.2
WP_000139992.1\|3008173_3008539_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	7.1e-39	67.5
WP_151577545.1\|3008539_3009595_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	3.7e-88	47.8
WP_024175747.1\|3009596_3009875_-	hypothetical protein	I6PCV7	Cronobacter_phage	1.1e-12	50.0
WP_000737636.1\|3010171_3010564_-	hypothetical protein	NA	NA	NA	NA
WP_001013636.1\|3010707_3010920_-	type I toxin-antitoxin system Hok family toxin	A0A0U2QV81	Escherichia_phage	8.9e-26	96.9
WP_001557860.1\|3010964_3011072_+	hypothetical protein	Q7Y2Q9	Escherichia_phage	3.8e-09	100.0
WP_021549781.1\|3011657_3012992_+	FRG domain-containing protein	Q9AZ51	Lactococcus_phage	2.6e-06	34.1
WP_151577546.1\|3013195_3013654_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-62	91.0
WP_021549782.1\|3013694_3014783_-	hypothetical protein	A0A088CD36	Shigella_phage	4.7e-62	64.6
WP_000693835.1\|3014854_3015280_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_000391950.1\|3015263_3015545_-	hypothetical protein	K7PHA1	Enterobacteria_phage	6.5e-24	72.6
WP_000362155.1\|3015645_3016065_+	hypothetical protein	K7PK07	Enterobacteria_phage	8.8e-25	65.1
WP_000379557.1\|3016330_3016486_+	DUF1391 family protein	M4QQ57	Salicola_phage	2.3e-07	53.2
WP_001171946.1\|3016645_3016864_+	hypothetical protein	NA	NA	NA	NA
WP_068862907.1\|3016886_3017288_+	hypothetical protein	I6PDF6	Cronobacter_phage	1.0e-09	81.6
WP_000358771.1\|3017247_3017526_-	hypothetical protein	NA	NA	NA	NA
WP_000854558.1\|3018087_3018276_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_063103131.1\|3018272_3018464_+	DUF1482 family protein	NA	NA	NA	NA
WP_109897019.1\|3018557_3020984_+	exonuclease	V5UQJ3	Shigella_phage	5.3e-114	48.2
WP_000096344.1\|3021042_3021246_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_000533617.1\|3021245_3022271_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	2.0e-102	57.9
3029195:3029210	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3079489 : 3166105

Shigella_phage(48.39%)

tail,plate,protease,integrase,portal,capsid,transposase,head,terminase,holin

attL 3080439:3080454|attR 3171537:3171552

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085960995.1\|3079489_3080703_-\|transposase	IS3-like element ISEc31 family transposase	Q716C2	Shigella_phage	2.6e-101	57.8
3080439:3080454	attL	NA	NA	NA	NA
WP_000174305.1\|3081898_3082588_+	D-galactonate utilization transcriptional regulator DgoR	NA	NA	NA	NA
WP_000127080.1\|3082584_3083463_+	2-dehydro-3-deoxygalactonokinase	NA	NA	NA	NA
WP_001198735.1\|3083446_3084064_+	2-dehydro-3-deoxy-6-phosphogalactonate aldolase	NA	NA	NA	NA
WP_000705006.1\|3084060_3085209_+	galactonate dehydratase	Q6A202	Oenococcus_phage	1.0e-51	32.8
WP_000354277.1\|3085328_3086621_+	MFS transporter	NA	NA	NA	NA
WP_000789107.1\|3087974_3088874_-	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA
WP_000677248.1\|3089213_3089933_+	amino acid racemase	NA	NA	NA	NA
WP_000262197.1\|3089991_3091290_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA
WP_000086501.1\|3091512_3092913_+	aspartate ammonia-lyase	NA	NA	NA	NA
WP_000667429.1\|3094456_3095671_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_001066367.1\|3095684_3096443_+	hypothetical protein	NA	NA	NA	NA
WP_000739816.1\|3096499_3097465_+	DMT family transporter	NA	NA	NA	NA
WP_151577549.1\|3097467_3098502_+	phosphotriesterase-related protein	NA	NA	NA	NA
WP_001221623.1\|3100816_3101224_-	hypothetical protein	NA	NA	NA	NA
WP_000270974.1\|3101211_3101613_-	hypothetical protein	NA	NA	NA	NA
WP_000221530.1\|3101872_3102442_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_001313064.1\|3103903_3104182_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_000813432.1\|3104275_3104878_+	hypothetical protein	NA	NA	NA	NA
WP_127627260.1\|3105420_3106790_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.1e-111	99.0
WP_000514103.1\|3108717_3109869_+	hypothetical protein	NA	NA	NA	NA
WP_001069805.1\|3109952_3110825_+	GTPase family protein	NA	NA	NA	NA
WP_151577550.1\|3111042_3113439_+	dGTPase	NA	NA	NA	NA
WP_000203545.1\|3113435_3114341_+	chemotaxis protein	NA	NA	NA	NA
WP_000102660.1\|3114337_3115408_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_151577591.1\|3115543_3116227_+	hypothetical protein	NA	NA	NA	NA
WP_000846713.1\|3116242_3116653_+	hypothetical protein	NA	NA	NA	NA
WP_001234504.1\|3116873_3117695_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	2.1e-46	38.8
WP_000860090.1\|3117776_3118256_+	antirestriction protein	A0A2D0W9W4	Bordetella_phage	1.7e-11	32.8
WP_012311619.1\|3118271_3118748_+	RadC family protein	NA	NA	NA	NA
WP_000692359.1\|3118810_3119032_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	3.6e-09	44.4
WP_001285585.1\|3119105_3119474_+	type IV toxin-antitoxin system toxin CbtA	NA	NA	NA	NA
WP_000988600.1\|3119932_3120127_+	hypothetical protein	NA	NA	NA	NA
WP_001016346.1\|3120741_3120924_+	hypothetical protein	NA	NA	NA	NA
WP_000450409.1\|3121024_3121354_-	DUF496 family protein	NA	NA	NA	NA
WP_001200888.1\|3121525_3122584_-	FUSC family protein	NA	NA	NA	NA
WP_001105376.1\|3122781_3123255_-	DNA gyrase inhibitor SbmC	NA	NA	NA	NA
WP_001296209.1\|3123373_3124540_-	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5
WP_000915534.1\|3125334_3125697_+	GtrA family protein	U5P0S6	Shigella_phage	1.9e-55	92.5
WP_087525763.1\|3126368_3127642_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.2e-170	96.0
WP_104773902.1\|3127954_3129427_+	hypothetical protein	A0A192Y7W8	Salmonella_phage	3.7e-33	28.0
WP_151577551.1\|3129456_3129792_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	5.1e-15	49.0
WP_001682408.1\|3129753_3130431_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000624622.1\|3130430_3130778_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_000381395.1\|3130797_3132369_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_151577553.1\|3132564_3133536_-	carbohydrate kinase	U5P0I1	Shigella_phage	2.2e-50	97.1
WP_151577554.1\|3133539_3134124_-	DUF2313 domain-containing protein	O22003	Shigella_phage	7.0e-113	99.5
WP_000785314.1\|3134114_3135173_-\|plate	baseplate J/gp47 family protein	M1FQW3	Enterobacteria_phage	1.0e-202	100.0
WP_000424732.1\|3135159_3135585_-	hypothetical protein	U5P0R9	Shigella_phage	2.3e-81	100.0
WP_085452342.1\|3135584_3136133_-\|plate	phage baseplate assembly protein	U5P081	Shigella_phage	3.6e-95	97.3
WP_000999510.1\|3136132_3137212_-\|plate	baseplate protein	U5P0H6	Shigella_phage	5.3e-207	100.0
WP_151577555.1\|3137208_3138585_-	DNA circularization protein	U5P4I0	Shigella_phage	1.1e-252	98.0
WP_072808075.1\|3138609_3140517_-\|tail	phage tail tape measure protein	U5P420	Shigella_phage	0.0e+00	98.9
WP_000571713.1\|3140601_3140925_-\|tail	phage tail assembly protein	U5P0R5	Shigella_phage	1.1e-51	99.1
WP_000090998.1\|3140921_3141278_-	hypothetical protein	U5P076	Shigella_phage	5.3e-63	100.0
WP_130059033.1\|3141277_3142774_-\|tail	phage tail protein	U5P0H3	Shigella_phage	4.4e-276	98.8
WP_000497751.1\|3142757_3142928_-	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	9.3e-26	100.0
WP_151577556.1\|3142936_3143497_-	hypothetical protein	M1FQV7	Enterobacteria_phage	1.3e-103	98.4
WP_000224835.1\|3143493_3144000_-	hypothetical protein	M1FPE2	Enterobacteria_phage	1.3e-83	92.9
WP_151577557.1\|3143974_3144385_-\|head	phage head closure protein	M1FJ87	Enterobacteria_phage	3.3e-69	93.4
WP_000927713.1\|3144381_3144705_-\|head,tail	phage gp6-like head-tail connector protein	U5P072	Shigella_phage	9.7e-56	98.1
WP_001570140.1\|3144707_3144908_-	hypothetical protein	M1FN89	Enterobacteria_phage	4.9e-26	95.5
WP_151577558.1\|3144957_3146163_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	5.9e-223	99.0
WP_151577559.1\|3146177_3146828_-\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	2.1e-118	99.1
WP_086167112.1\|3146805_3148047_-\|portal	phage portal protein	U5P411	Shigella_phage	7.6e-242	99.3
WP_151577560.1\|3148046_3148229_-	hypothetical protein	S5FXQ9	Shigella_phage	5.5e-24	98.3
WP_072011717.1\|3148240_3149737_-\|terminase	terminase large subunit	A0A1C9IIA1	Salmonella_phage	7.4e-300	99.8
WP_000929174.1\|3149987_3150473_-\|terminase	phage terminase small subunit P27 family	Q8SBI1	Shigella_phage	2.1e-86	99.4
WP_072808093.1\|3150622_3150973_-	HNH endonuclease	Q8SBD7	Shigella_phage	9.5e-65	99.1
WP_040073296.1\|3151156_3151549_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	3.8e-54	86.2
WP_016236818.1\|3151532_3152009_-	glycoside hydrolase family protein	Q8SBE0	Shigella_phage	1.5e-84	94.3
WP_001120490.1\|3152012_3152339_-\|holin	phage holin, lambda family	U5P0K7	Shigella_phage	2.6e-56	98.1
WP_121855893.1\|3152415_3153468_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	3.1e-204	98.0
WP_000917724.1\|3153618_3153822_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_015967852.1\|3154074_3154827_-	antitermination protein	Q8SBE4	Shigella_phage	2.8e-138	100.0
WP_151577561.1\|3154840_3155830_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.2e-194	99.4
WP_151577562.1\|3155837_3156647_-	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	5.3e-151	99.6
WP_000767134.1\|3156666_3157056_-	RusA family crossover junction endodeoxyribonuclease	A5LH74	Enterobacteria_phage	3.2e-69	100.0
WP_000210187.1\|3157052_3157379_-	LexA family transcriptional regulator	A5LH73	Enterobacteria_phage	1.6e-53	100.0
WP_151577563.1\|3157375_3158029_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	2.4e-125	97.7
WP_077633387.1\|3158028_3158523_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	2.5e-87	98.8
WP_072808130.1\|3158519_3159461_-	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	1.4e-139	97.4
WP_001250269.1\|3159450_3159630_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_151577564.1\|3159805_3160357_-	hypothetical protein	U5P4K1	Shigella_phage	3.4e-101	99.5
WP_000649480.1\|3160400_3160601_-	transcriptional regulator	U5P445	Shigella_phage	1.9e-30	98.5
WP_000848748.1\|3160691_3161366_+	LexA family transcriptional repressor	U5P0T5	Shigella_phage	1.2e-132	100.0
WP_000549626.1\|3161600_3161807_+	hypothetical protein	NA	NA	NA	NA
WP_000016389.1\|3161778_3162213_-	hypothetical protein	U5P096	Shigella_phage	8.4e-79	100.0
WP_001401560.1\|3162757_3163294_+	5'-deoxynucleotidase	K7PKJ9	Enterobacteria_phage	2.2e-100	99.4
WP_032209648.1\|3163284_3164163_+	phosphoadenosine phosphosulfate reductase family protein	A0A2R2Z314	Escherichia_phage	1.5e-167	93.5
WP_000156999.1\|3164159_3164363_+	hypothetical protein	A0A2R2Z313	Escherichia_phage	6.1e-32	98.5
WP_072808121.1\|3164355_3164595_+	hypothetical protein	S5MQM0	Escherichia_phage	2.2e-36	98.7
WP_000132739.1\|3164754_3164946_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_072808118.1\|3164926_3166105_-\|integrase	site-specific integrase	K7P7J2	Enterobacteria_phage	4.1e-229	99.0
3171537:3171552	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3898908 : 3917974

Salmonella_phage(12.5%)

integrase

attL 3910643:3910657|attR 3917354:3917368

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016231257.1\|3898908_3899346_+	hypothetical protein	I6S5X4	Salmonella_phage	3.1e-12	33.1
WP_139527447.1\|3899407_3901513_-	injection protein	A0A2I7QQN9	Vibrio_phage	3.6e-90	37.1
WP_001585369.1\|3901512_3902934_-	phage DNA ejection protein	B6SCW4	Bacteriophage	2.2e-123	53.0
WP_000909175.1\|3902933_3903611_-	hypothetical protein	Q2A0B2	Sodalis_phage	9.2e-56	71.6
WP_000420674.1\|3903604_3904066_-	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-61	72.2
WP_001585368.1\|3904828_3907585_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.8e-299	57.3
WP_001208878.1\|3907571_3907943_-	hypothetical protein	NA	NA	NA	NA
WP_000628967.1\|3907935_3908277_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.5e-33	61.5
WP_001058748.1\|3908287_3908890_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.6e-25	36.3
WP_151577576.1\|3908882_3909104_-	hypothetical protein	NA	NA	NA	NA
WP_001024675.1\|3909100_3909364_-	hypothetical protein	NA	NA	NA	NA
WP_001065738.1\|3909360_3909555_-	hypothetical protein	NA	NA	NA	NA
WP_062871628.1\|3909547_3910615_-	ash family protein	A0A1C9IHV9	Salmonella_phage	8.6e-16	38.4
WP_000476150.1\|3910608_3910791_-	DUF4222 domain-containing protein	NA	NA	NA	NA
3910643:3910657	attL	NA	NA	NA	NA
WP_032312024.1\|3910783_3911617_-	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
WP_000412531.1\|3911629_3912061_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	2.3e-28	49.7
WP_000035054.1\|3912060_3912264_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	4.7e-08	50.9
WP_000772643.1\|3912691_3913906_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	9.7e-133	56.5
WP_000893265.1\|3914262_3915516_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.2e-95	47.2
WP_001285288.1\|3915527_3916631_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_012311723.1\|3916918_3917974_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	4.5e-118	60.9
3917354:3917368	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP043035

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33888 : 97048

Stx2-converting_phage(27.27%)

integrase,transposase

attL 60693:60708|attR 86156:86171

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000381395.1\|33888_35460_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_000624622.1\|35479_35827_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001682408.1\|35826_36504_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_089078998.1\|41327_42601_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	8.0e-170	95.3
WP_072770368.1\|43053_45357_-	TraM recognition domain-containing protein	NA	NA	NA	NA
WP_106487144.1\|45337_46456_-	DsbC family protein	NA	NA	NA	NA
WP_106487145.1\|46452_47724_-	IncI1-type conjugal transfer protein TrbA	NA	NA	NA	NA
WP_103768233.1\|48707_49175_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	5.2e-18	36.7
WP_072643577.1\|49339_49963_+	DNA-binding protein	NA	NA	NA	NA
WP_072643578.1\|50050_50506_+	DUF2569 family protein	NA	NA	NA	NA
WP_103768234.1\|50984_51137_+	Hok/Gef family protein	NA	NA	NA	NA
WP_001138649.1\|51133_51295_-	hypothetical protein	NA	NA	NA	NA
WP_113895550.1\|51450_52098_-	plasmid IncI1-type surface exclusion protein ExcA	NA	NA	NA	NA
WP_151577606.1\|52185_54345_-	DotA/TraY family protein	NA	NA	NA	NA
WP_000650755.1\|54417_54987_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_151577608.1\|54983_56189_-	conjugal transfer protein TraW	NA	NA	NA	NA
WP_097418642.1\|56146_56767_-	conjugal transfer protein TraV	NA	NA	NA	NA
WP_151577610.1\|56766_59811_-	ATP-binding protein	NA	NA	NA	NA
WP_000690886.1\|59986_60367_-	hypothetical protein	NA	NA	NA	NA
WP_053287752.1\|60366_60726_-	hypothetical protein	NA	NA	NA	NA
60693:60708	attL	NA	NA	NA	NA
WP_072645885.1\|60793_61612_-	conjugal transfer protein TraT	NA	NA	NA	NA
WP_001277575.1\|61526_61778_-	hypothetical protein	NA	NA	NA	NA
WP_029391936.1\|61834_62233_-	hypothetical protein	NA	NA	NA	NA
WP_001379391.1\|62279_62807_-	conjugal transfer protein TraQ	NA	NA	NA	NA
WP_000787008.1\|62806_63520_-	conjugal transfer protein TraP	NA	NA	NA	NA
WP_106108243.1\|63516_64848_-	conjugal transfer protein TraO	NA	NA	NA	NA
WP_089619962.1\|64851_65826_-	conjugal transfer protein TraN	NA	NA	NA	NA
WP_072661792.1\|65836_66532_-	conjugal transfer protein TraM	NA	NA	NA	NA
WP_033806792.1\|66543_66894_-	hypothetical protein	NA	NA	NA	NA
WP_151577612.1\|66910_70963_-	DNA primase	A0A1B0VML8	Pseudomonas_phage	5.0e-16	29.8
WP_000817799.1\|71026_71317_-	hypothetical protein	NA	NA	NA	NA
WP_058100838.1\|71313_72462_-	plasmid transfer ATPase TraJ	NA	NA	NA	NA
WP_000745049.1\|72445_73282_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_045145391.1\|73278_73737_-	DotD/TraH family lipoprotein	NA	NA	NA	NA
WP_097413657.1\|73840_75040_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_151577614.1\|75145_75967_-	conjugal transfer protein TraE	NA	NA	NA	NA
WP_032354120.1\|76240_76561_+	hypothetical protein	NA	NA	NA	NA
WP_021532709.1\|76652_76943_-	hypothetical protein	NA	NA	NA	NA
WP_021532708.1\|76984_78154_-\|integrase	site-specific integrase	B5WZU7	Pseudomonas_phage	1.1e-48	44.0
WP_000271302.1\|78823_79063_+	hypothetical protein	NA	NA	NA	NA
WP_053287758.1\|79067_80441_-	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	K7P7Q7	Enterobacteria_phage	2.5e-23	43.4
WP_151577628.1\|80437_81088_-	prepilin peptidase	NA	NA	NA	NA
WP_021532704.1\|81104_81581_-	lytic transglycosylase domain-containing protein	A0A0A8J856	Ralstonia_phage	1.3e-08	37.0
WP_021532703.1\|81639_82176_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_151577616.1\|82225_83326_-	type II secretion protein F	NA	NA	NA	NA
WP_106631238.1\|83327_84836_-	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_021547655.1\|84932_85529_-	hypothetical protein	NA	NA	NA	NA
WP_021532699.1\|85624_86179_-	hypothetical protein	NA	NA	NA	NA
86156:86171	attR	NA	NA	NA	NA
WP_021547657.1\|86227_86680_-	type IV pilus biogenesis protein PilP	NA	NA	NA	NA
WP_151577618.1\|86669_87965_-	type 4b pilus protein PilO2	NA	NA	NA	NA
WP_021532696.1\|87985_89605_-	PilN family type IVB pilus formation outer membrane protein	NA	NA	NA	NA
WP_021532695.1\|89635_90073_-	type IV pilus biogenesis protein PilM	NA	NA	NA	NA
WP_151577620.1\|90077_91148_-	pilus assembly protein	NA	NA	NA	NA
WP_032354078.1\|91268_91664_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|92240_92945_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000219391.1\|93066_93972_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000004159.1\|93968_95207_+	MFS transporter	NA	NA	NA	NA
WP_001137892.1\|95206_95791_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|96283_97048_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP043034

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

71662 : 182069

117

Escherichia_phage(30.3%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042634304.1\|71662_72742_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
WP_001040059.1\|72743_73517_-	hypothetical protein	NA	NA	NA	NA
WP_001285478.1\|73509_74652_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	1.7e-30	35.4
WP_001035162.1\|74661_75720_-	hypothetical protein	NA	NA	NA	NA
WP_042634303.1\|76043_76625_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_001054787.1\|76624_77782_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007448.1\|77804_78260_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_000255079.1\|78282_79323_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116677.1\|79371_79950_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	3.3e-06	40.0
WP_000301242.1\|80017_80593_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053338.1\|81021_82263_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000077926.1\|82825_83107_-	hypothetical protein	NA	NA	NA	NA
WP_000398480.1\|83156_83348_-	hypothetical protein	NA	NA	NA	NA
WP_001371937.1\|83439_83811_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|84153_84546_+	hypothetical protein	NA	NA	NA	NA
WP_024136327.1\|85149_85443_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_086722013.1\|85447_86773_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000134171.1\|86833_87040_+	hypothetical protein	NA	NA	NA	NA
WP_000985911.1\|87141_87552_+	hypothetical protein	NA	NA	NA	NA
WP_001572439.1\|87564_88380_+	HNH endonuclease	G0X580	Salmonella_phage	1.1e-15	36.5
WP_001043843.1\|88633_89059_+	hypothetical protein	NA	NA	NA	NA
WP_001572440.1\|89803_90103_+	hypothetical protein	NA	NA	NA	NA
WP_123872853.1\|90092_90413_+	hypothetical protein	NA	NA	NA	NA
WP_032192809.1\|90415_92455_-	ATP-dependent helicase	E3T5J8	Cafeteria_roenbergensis_virus	2.5e-24	24.8
WP_001572342.1\|92451_93438_-	hypothetical protein	NA	NA	NA	NA
WP_001194555.1\|94468_94672_+	hypothetical protein	NA	NA	NA	NA
WP_001287392.1\|95013_95418_-	H-NS histone family protein	NA	NA	NA	NA
WP_000175476.1\|95915_96152_-	hypothetical protein	NA	NA	NA	NA
WP_001572344.1\|96193_96649_-	hypothetical protein	NA	NA	NA	NA
WP_000490638.1\|96708_97374_-	hypothetical protein	NA	NA	NA	NA
WP_001426317.1\|97431_97812_-	hypothetical protein	NA	NA	NA	NA
WP_000193209.1\|98455_99274_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001572381.1\|99270_100476_+	hypothetical protein	NA	NA	NA	NA
WP_000078514.1\|100755_102075_-	DUF1173 family protein	NA	NA	NA	NA
WP_000833382.1\|102325_103753_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_001572389.1\|103967_104483_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
WP_000975182.1\|104485_105382_+	hypothetical protein	NA	NA	NA	NA
WP_015059496.1\|105603_105837_+	hypothetical protein	NA	NA	NA	NA
WP_001572393.1\|106498_106729_+	hypothetical protein	NA	NA	NA	NA
WP_000185304.1\|107065_107527_+	hypothetical protein	NA	NA	NA	NA
WP_000074418.1\|107556_107964_+	hypothetical protein	NA	NA	NA	NA
WP_029698059.1\|108014_108332_-	hypothetical protein	NA	NA	NA	NA
WP_031613424.1\|108708_109059_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|110748_111453_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071448054.1\|111458_112205_+	winged helix family transcriptional regulator	NA	NA	NA	NA
WP_014839979.1\|112204_112723_+	hypothetical protein	NA	NA	NA	NA
WP_014839980.1\|112727_113144_-	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
WP_001617865.1\|113755_114631_-	class A extended-spectrum beta-lactamase CTX-M-14	A0A1B0VBP7	Salmonella_phage	6.1e-153	99.6
WP_001067855.1\|114933_115638_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|115788_116604_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|116793_117498_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001083725.1\|117902_118400_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|118511_118802_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|119448_120153_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000376616.1\|120377_120581_-	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|120708_121548_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_072644484.1\|121728_121893_+	cupin domain-containing protein	NA	NA	NA	NA
WP_001067858.1\|123283_123988_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_063102497.1\|124181_124568_+	bleomycin binding protein	NA	NA	NA	NA
WP_057109146.1\|124887_125280_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_001067858.1\|125614_126319_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_151577594.1\|126638_127814_+	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA
WP_032495443.1\|127837_130990_+	multidrug efflux RND transporter permease subunit OqxB2	NA	NA	NA	NA
WP_000888203.1\|131059_131539_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_001067858.1\|131640_132345_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_152919720.1\|132381_132552_-	hypothetical protein	NA	NA	NA	NA
WP_000770127.1\|132802_133159_-	hypothetical protein	NA	NA	NA	NA
WP_001130842.1\|133308_133926_-	hypothetical protein	NA	NA	NA	NA
WP_000111290.1\|134119_134554_+	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	2.5e-22	48.8
WP_042634445.1\|134537_135797_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	2.6e-96	44.3
WP_000031377.1\|135842_136652_-	DsbA family protein	NA	NA	NA	NA
WP_000620990.1\|136758_137370_+	hypothetical protein	NA	NA	NA	NA
WP_000025803.1\|137429_137852_-	hypothetical protein	NA	NA	NA	NA
WP_000843244.1\|137885_138278_-	hypothetical protein	NA	NA	NA	NA
WP_000720274.1\|138302_139052_-	thioredoxin fold domain-containing protein	NA	NA	NA	NA
WP_000494967.1\|139199_139739_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_024136329.1\|139821_140388_+	hypothetical protein	NA	NA	NA	NA
WP_001284752.1\|140495_141785_-	HNH endonuclease	A0A1S6KZY3	Salmonella_phage	5.5e-09	32.9
WP_046788498.1\|141965_145919_-	conjugal transfer protein TraG	NA	NA	NA	NA
WP_001257292.1\|145927_147343_-	hypothetical protein	NA	NA	NA	NA
WP_000196728.1\|147332_148379_-	thioredoxin family protein	NA	NA	NA	NA
WP_001140953.1\|148972_149485_-	hypothetical protein	NA	NA	NA	NA
WP_000004209.1\|149486_150287_-	hypothetical protein	NA	NA	NA	NA
WP_000019443.1\|150481_151474_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.2e-182	99.4
WP_000071885.1\|152244_152730_+	hypothetical protein	NA	NA	NA	NA
WP_000128631.1\|152726_153464_+	hypothetical protein	NA	NA	NA	NA
WP_001011151.1\|153473_156620_+	helicase	NA	NA	NA	NA
WP_046788497.1\|156619_158704_+	conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_046788496.1\|158703_159813_+	hypothetical protein	NA	NA	NA	NA
WP_000718549.1\|159799_160462_+	DUF4400 domain-containing protein	NA	NA	NA	NA
WP_000952983.1\|160472_161654_+	S49 family peptidase	B8QTU8	Erwinia_phage	3.4e-13	29.2
WP_001317493.1\|162286_163069_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.9e-139	99.6
WP_000210769.1\|164632_164986_-	hypothetical protein	NA	NA	NA	NA
WP_001032029.1\|165051_165336_-	hypothetical protein	NA	NA	NA	NA
WP_071447784.1\|165692_165995_-	hypothetical protein	NA	NA	NA	NA
WP_000537761.1\|166427_166796_-	hypothetical protein	NA	NA	NA	NA
WP_000800252.1\|166960_167497_-	hypothetical protein	NA	NA	NA	NA
WP_000286107.1\|167564_168002_-	hypothetical protein	NA	NA	NA	NA
WP_000744346.1\|168046_168343_-	hypothetical protein	NA	NA	NA	NA
WP_000893963.1\|168463_168670_-	hypothetical protein	NA	NA	NA	NA
WP_000710431.1\|168926_169208_-	hypothetical protein	NA	NA	NA	NA
WP_001272970.1\|169273_170458_-	hypothetical protein	NA	NA	NA	NA
WP_000778030.1\|171559_172504_+	DUF5417 domain-containing protein	NA	NA	NA	NA
WP_001031421.1\|172603_173203_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.7e-08	42.6
WP_000743060.1\|173262_173613_+	hypothetical protein	NA	NA	NA	NA
WP_001015182.1\|173658_173862_+	hypothetical protein	NA	NA	NA	NA
WP_000783758.1\|174280_174439_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_087522250.1\|174537_175907_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	6.3e-112	99.5
WP_000137793.1\|176239_176845_-	hypothetical protein	NA	NA	NA	NA
WP_000703843.1\|177060_177342_-	hypothetical protein	NA	NA	NA	NA
WP_001424621.1\|177716_178028_-	hypothetical protein	NA	NA	NA	NA
WP_000814954.1\|178250_178451_-	hypothetical protein	NA	NA	NA	NA
WP_000551490.1\|178490_178715_-	hypothetical protein	NA	NA	NA	NA
WP_000781545.1\|178769_178973_-	hypothetical protein	NA	NA	NA	NA
WP_000381395.1\|179453_181025_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	9.9e-170	58.7
WP_000624622.1\|181044_181392_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_001682408.1\|181391_182069_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP043033

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP043035

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CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP043034

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection