CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP021847	Pseudoalteromonas sp. A25 chromosome 2	2 crisprs	DinG,cas3,DEDDh,WYL,csa3,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1	0	22	65	0
NZ_AP021846	Pseudoalteromonas sp. A25 chromosome 1	7 crisprs	csa3,cas3,DinG,DEDDh,WYL	1	0	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP021846_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_1

824338-824530

Unclear

Consensus_repeat	Method
ATAAAGAATTGCGATGCAGGCGGTCGGAGGTTCACTCTTACAAAAA	PILER-CR
GGTCGGAGGTTCACTCTTACAAAAACGTCCCGC	CRISPRCasFinder

2 spacers

cas3

The CRISPR arrays of NZ_AP021846_1

>merge|NZ_AP021846|1|824338-824530|PILER-CR,CRISPRCasFinder
CAGGCGGTCGGAGGTTCGAATCCTCCCGCGTCCGCCACTTTTCTTAAGTGGTTAAATATAAAGAATTGCGATGCAGGCGGTCGGAGGTTCACTCTTACAAAAACGTCCCGCATACGCCACTTTTCTTAAGTGGTTAAATATAAAGAATTGCGATGCAGGTGGTCGGAGGTTCACTCTTACAAAAAACGTCCCG

>NZ_AP021846|1|1|824338-824522|PILER-CR
CAGGCGGTCGGAGGTTCGAATCCTCCCGCGTCCGCCACTTTTCTTAAGTG	GTTAAATATAAAGAATTGCGATGCAGGCGGTCGGAGGTTC
ACTCTTACAAAAACGTCCCGCATACGCCACTTTTCTTAAGTGGTTAAATA	TAAAGAATTGCGATGCAGGTGGTCGGAGGTTCACT
CTTACAAAAA

>NZ_AP021846|1|1|824416-824530|CRISPRCasFinder
GGTCGGAGGTTCACTCTTACAAAAACGTCCCGC	ATACGCCACTTTTCTTAAGTGGTTAAATATAAAGAATTGCGATGCAGGT
GGTCGGAGGTTCACTCTTACAAAAAACGTCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152085147.1\|818297_819050_+\|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC	unknown	unknown	gnl\|CDD\|182802
NZ_AP021846.1\|WP_152085157.1\|833700_834246_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_AP021846.1\|WP_152085141.1\|811468_814123_+\|response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_AP021846.1\|WP_152085148.1\|819127_820855_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|182944
NZ_AP021846.1\|WP_152085155.1\|831747_833124_+\|sodium:proton-antiporter	unknown	unknown	gnl\|CDD\|224671
NZ_AP021846.1\|WP_152085151.1\|825634_827350_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_AP021846.1\|WP_152085158.1\|834282_834918_-\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_AP021846.1\|WP_152085142.1\|814166_815399_-\|ATP-dependent-RNA-helicase-SrmB	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236877
NZ_AP021846.1\|WP_152085149.1\|820978_822077_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_AP021846.1\|WP_152085150.1\|822104_823646_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_AP021846.1\|WP_152085145.1\|816708_817230_-\|flavodoxin-FldB	unknown	unknown	gnl\|CDD\|183471
NZ_AP021846.1\|WP_152085160.1\|835674_836301_+\|GTP-cyclohydrolase-II-RibA	unknown	unknown	gnl\|CDD\|234745
NZ_AP021846.1\|WP_152085153.1\|829520_830675_+\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_AP021846.1\|WP_152085143.1\|815467_816169_+\|methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_AP021846.1\|WP_152085144.1\|816197_816692_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085154.1\|830671_831520_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|224651
NZ_AP021846.1\|WP_152085159.1\|835045_835552_+\|DUF3087-family-protein	unknown	unknown	gnl\|CDD\|378624
NZ_AP021846.1\|WP_152085152.1\|827346_829227_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085156.1\|833120_833711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085146.1\|817310_818234_+\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|234713

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152085147.1\|818297_819050_+\|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC	gnl\|CDD\|182802	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional.	2.94019e-83
NZ_AP021846.1\|WP_152085157.1\|833700_834246_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	3.36614e-29
NZ_AP021846.1\|WP_152085141.1\|811468_814123_+\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	6.47545e-90
NZ_AP021846.1\|WP_152085148.1\|819127_820855_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|182944	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ.	0
NZ_AP021846.1\|WP_152085151.1\|825634_827350_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	9.28794e-07
NZ_AP021846.1\|WP_152085158.1\|834282_834918_-\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	2.07425e-16
NZ_AP021846.1\|WP_152085153.1\|829520_830675_+\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	3.65621e-180
NZ_AP021846.1\|WP_152085149.1\|820978_822077_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_AP021846.1\|WP_152085150.1\|822104_823646_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_AP021846.1\|WP_152085145.1\|816708_817230_-\|flavodoxin-FldB	gnl\|CDD\|183471	PRK12359, PRK12359, flavodoxin FldB; Provisional.	5.81973e-115
NZ_AP021846.1\|WP_152085160.1\|835674_836301_+\|GTP-cyclohydrolase-II-RibA	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	1.12243e-103
NZ_AP021846.1\|WP_152085142.1\|814166_815399_-\|ATP-dependent-RNA-helicase-SrmB	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0
NZ_AP021846.1\|WP_152085143.1\|815467_816169_+\|methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	4.37499e-65
NZ_AP021846.1\|WP_152085159.1\|835045_835552_+\|DUF3087-family-protein	gnl\|CDD\|378624	pfam11286, DUF3087, Protein of unknown function (DUF3087). This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.	4.11114e-80
NZ_AP021846.1\|WP_152085154.1\|830671_831520_-\|SIS-domain-containing-protein	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	2.77579e-65
NZ_AP021846.1\|WP_152085155.1\|831747_833124_+\|sodium:proton-antiporter	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	6.54643e-35
NZ_AP021846.1\|WP_152085146.1\|817310_818234_+\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	5.82242e-161

>NZ_AP021846.1|WP_152085150.1|822104_823646_+|lysine--tRNA-ligase
MTDQIQDENKLIAERRTKLDAIRENCNANGHPNSFRREDYTADLQAKLGDKSKEELVELDCQAAVAGRILAKRGPFLVLQDMKGRIQAYASKDVQKDLKAKYGQLDIGDIIGVKGPVHKSGKGDLYVDMVEYELLTKSLRPLPEKFHGLTDQEAKYRQRYVDLITNMDTRETFRIRSKVIEGIRRFLAERDFMEVETPMLQVIPGGATARPFVTHHNALDIDMYLRIAPELYLKRLVVGGFDRVFEINRNFRNEGLSTRHNPEFTMIEFYQAYADYKDLMNLTEDMLRTVAQDVLGTTTIVNTTKNADGEVVDTIEYDFGQPFARLSMADAIIEHSADAAAKAHIFKDPENHFEELKAFAKQIHVKTPENCVWGPGKFLCEIFEEVAEHKLIQPTFITEYPWEVSPLARRNDENPFITDRFEFFVGGRELANGFSELNDAEDQAARFARQVEEKDAGDDEAMHFDDDYIQALEYGLPPTAGEGIGIDRLVMLFTDSPTIKDVILFPHMRPQAD
>NZ_AP021846.1|WP_152085149.1|820978_822077_+|peptide-chain-release-factor-2
MFEVNPVINQIKDIRERTELLRGYLDYAHKLERLEEVNAELEDSAVWNEPEKAQALGREKSALEAVVETIDELVSGADDVEGLVELAVEAEDQDTFDEAQQELEVLVASLDKLEFRRMFSGPHDDSDAYLDLQSGSGGTEAQDWCNMLLRMYLRWGEAKGFKVELVEATDGDVAGIKGATVRFVGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFVYPEVDDNIEIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQNERSQHKNKAQAMKQLKAKLFELEMQAQNAEKQSQEDAKSDIGWGSQIRSYVLDDSRIKDLRTGVENRNTQAVLDGDLDKFIEASLKSGL
>NZ_AP021846.1|WP_152085148.1|819127_820855_+|single-stranded-DNA-specific-exonuclease-RecJ
MNTHIKARQRVDDSHLPSHLHPVIKQIYASRGVQTATELDNRATTLLDFRLFKDIEIACDILQSALYAQARILIVGDFDADGATSTAVLMEGLTQFGYQHVDYLVPDRFSLGYGLSPALAEQIVGLKPDLVITVDNGISCIAGIDIVKQAGIQVIVTDHHLQGEQLPNADAIVNPNQHGCQFPSKSIAGVGVAFYVLVALRHHLRAQGYFTDSGQPEPNLASLLDIVALGTVADVVALDANNRTLVYQGLARIRNGHTRPGIEALIEVSNRNAARLNASDFGFALAPRLNAAGRLDDMSLGIACLLSKDINQARRIAGELDSLNHERREIEQGMQQEALAVLERLVMSTQVVPDALCLYQDDWHQGVIGILAGRLKEQYHRPTVIFAQGDHGELKGSCRSIEGIHMRDLLESLNTQYPDLIVKFGGHAMAAGLTIQESNFEQFKRVFVSTVGDNLSEEHKQSVLLTDGALPSECFSMEFAQLLQQAGPWGQHFPEPVFYGEFELVQQRIVGEKHLKLVLKHASGKLVDAIAFNVDVKAWPNTQALLAQVAYQLDINEFRGKFSLQLIVREISAIT
>NZ_AP021846.1|WP_152085147.1|818297_819050_+|bifunctional-protein-disulfide-isomerase/oxidoreductase-DsbC
MKKLMLAAAMVCSFSTFANTEVDTASESTLMAPLSVDPIKESFAKLGVSVKSVESSPIEGLKTVLTDKGVLYASADGKYLMQGNLIDLENRVNVTDQALSGVRKEGVAQYQDSMIVYKAENEKHQITVFTDITCGYCRKLHRELEDYLSAGITVKYLAYPRGGIGSGGYSDLMNVWCAKDAAQALTDAKAGQKVAKVENCSAPVAEHYQLGQSFGLSGTPAIILDDGTLIPGYQPADSLAKMLEDKSNKS
>NZ_AP021846.1|WP_152085146.1|817310_818234_+|site-specific-tyrosine-recombinase-XerD
MSEQQPVVPLSGENADYIEQFLDSLFLEQGLSENTLAAYRSDIEKCAHFIQATFDVSLLSVDSAHIEAYLAHRHDLGLKARSTARALSALKRFYLYFVREKRISNTPLLNIAQPKTTQSLPKTLTEQEVEALLEAPNLEEPMGLRDKAMLELLYATGLRVTELVGLRMEQLNLRQAVVLVKGKGGKERLVPMGEEALHYIELFLRVGRPEMVKHATDFVFPSKRGTGMTRQTFWHRIKHYAILAQVVSPLSPHTLRHAFATHLLNHGADLRVVQMMLGHSDLSTTQIYTHVASERLKSLHQQHHPRA
>NZ_AP021846.1|WP_152085145.1|816708_817230_-|flavodoxin-FldB
MQIGLFYGSTTCYTEMAAEKMRDIIGSDIVSLHNIKDEPLANAQQYDFLIFGISTWDFGELQEDWESCWDDIDGVNLTGKTIALFGMGDQQGYGQWFQDALGMLHDKIAPQGVQFLGYWPNTPDYEFEASKALTDDKKYFVGLALDEDSQYDKSDERIATWITQIMTEYSETL
>NZ_AP021846.1|WP_152085144.1|816197_816692_+|hypothetical-protein
MQEQTQQILSFLRQIQLPFELKCFSNKKTFLPGLKLQQGVLQIDLASLLYPGDILHEAGHVAVCEPKERHLLSDNVYQSGRNKDWMHGEEMAAIAWSVAAAKHIGLPLEVVFHPNGYKGQSAHWVEVFSNSAGFGYPLLGVWDMLDPERGFPHMRCWIREVSWV
>NZ_AP021846.1|WP_152085143.1|815467_816169_+|methyltransferase
MSGFAFKQFKVQQSNTAMKVSTDGILLGAWTNLSEAKRLLDIGCGTGLLSLMCKQRVPNLEVEAVEIDEGAYEDAFANIWHSPWPDIQLHQGDIRTFNSTDLFDVVICNPPYFNGSLKGPNQARNTARHTDSLPFGALINAFTRLSHPGSRLALILPCTEAEQFKSLGESEGLVLQRECLVATTEYKSPTRSLLEFGYDGAQLIATDSLCIQRSDGGYSAEFIALCRDFYVKM
>NZ_AP021846.1|WP_152085142.1|814166_815399_-|ATP-dependent-RNA-helicase-SrmB
MQFSEFDLDQKVLTAINKMGFDTATSIQQLAIPEALLGRDILASAPTGTGKTAAFLIPAIQYLLDFPRRDPGFARVLIMAPTRELAYQVHEQCQLLAANTHLRIGVVTGGINYGSHKEIFEKNNDILIATPGRLMEYLETENFHAENVELLILDEADRMLDLGFKKEMLRICDEAKNRRQCFLFSATLEGDSVELFAERILKDPALLEAESSRKEKAKIHQWIHLADDYKHKLAMLTHLLQNEEEVQKAIVFVKTRERLEQLVGELYAQDIKTTWLRGEMPQDKRMTAMANFHSGRTRILIATDVAARGIDVPDITHVINFDMPRTADVYVHRIGRTGRAGKKGTAISMVEAHDAAILKKVERYTEQSLKRRVIKGLEPQHKEAKPPKKKKDPVKMKAKKKLKTKQKKKK
>NZ_AP021846.1|WP_152085141.1|811468_814123_+|response-regulator
MTFYRSLAFQLSLGLLCISVLVLSSAYLTKISYKLLAYRDSEIANSTELAERAYLLELSVIDLQRNVLIYKQSASSAAMNRSNELIDKLEAVLAQIDQASQQTQDVSDMIARMQSHLADYKDNLAVAVAGREKRQSLYQDEFLAVINTAQDVINQELETTQKAQATLYLTKAHNAVLTYLMTQNAVHVNVFNQQISLAKSQLTNTVVKAHFQKIAMAFRKLHQTIRGYLYLTNVVLPGTANEILHLSSTLRALEEQQMQDKITSAKETTSSLQGRSELFTLLSIMLVALYAAFLILRVIRPIRSLTVLFKRLSNNLHVDDIPYLKREDEIGQLSVAASVFHNKNLQTTELFERTKELVIEQKSLNEELAAKQQEAEQATISKSLFLANMSHEIRTPMNGIIGLIELLKASNLEAEQRECIEKIDYSSGVLMAVINDILDFSKIEAGKLDIEEKEFELDQMLDNILASVSLRATEKNLYFRCVSPTQESHLVGDEVRITQVILNLCNNAIKFTSLGGVELRVSTYDSATGEVILGIEVEDTGIGMTLQHQSDVFEQFSQADVSTSRKFGGTGLGLAIVKQLCELMNGSVSVHSEVDKGSVFSVMLKLHRATQRQKSKLPVNHNFAVSIVCQRQINKVTKIISDYFAFNNCKVTYLELHKVAAMTQQELSALNIVLVLDHQMSESICLADIASLQYYSAGLCVVIDKRDSVLLTRAGIARDTLVLEMPFTYSAFYNHICKLFKHDVVPTHKAEAKVELRLKGRVLLVEDNAVNQMVAEKLLASLGLEADIAQDGRQAVDKLSNTPYAYDLVLMDIQMPVMDGFTATEYIRKELQLNMPICGLSANAMSEDYDKAIASGMNDFMTKPIKMEQLKMVLQQYLEQDISA
>NZ_AP021846.1|WP_152085151.1|825634_827350_-|HEAT-repeat-domain-containing-protein
MKFLYQLAQLSAPLVALTSFYLSAQNDCQPQYQFDIEAHTSFNYVKLQSPPQTSTVRLQGAISIKPARNGEEQNWWAIKADNVVSVFNQSTTPLPSYEYPFAFKLNKNGLIKAFYFFENIDKQTQDKLKGLAYYFQYQKDTSSIQVEPDTLGYYQPTYQSNQNQLKMSKQTYAQFDQTQLSTFSRINIIHSEHNITPSKCFLKSRKGSEVLELIGQELNFGSNQSYRITKIDSGFQSTLFDMSEDVTQWQTSSVQLSEEEKARLAKALHQFITTQDITAIDAHTLATLLKQYDSVISTLKPIILSAQLSDAAQMRLFNALGQLDSASSQILLGHILQAHKQPQTQFRALRALSQGSAALSEQTNQLLLEMLNNGFITLDAEVESSFYMTLGTLLYNRPSSDNSEQLRQAITEQIVLNENEVKTASLISALGNSRSPDHEALLSEHLSSKSARIEKASIRALGMMQTPNAYQNLERHFFDSEKRNKKALVSALGRYQMSPKASDRVLNIAVNDSNDGVRYAAISALAKQKDQAGIKPILRQALSTETSRRNFKAIVELLHAKDGKTSNQPNF
>NZ_AP021846.1|WP_152085152.1|827346_829227_-|hypothetical-protein
MQKITHSLLATAMLLGLSGCQLGSNDKNQTEVVTPSEEKNISIVKISTGPLETLEPNTSVQVYYDVDIVGFDNIDVDVHFYLIHADELSSSNEQETEITEVHKVGALELTKVSQGTHSFDTHITIPNQLLGGQYHLIAQIDPHDAHAEDIEEDNHPSTEHSPFADGNFPFADLHVRVLENHDYKLLKAEFGQQTLILDKPDVSEGTSEHHSDLVGYLEADYEGNNLGDTVITAQILINGNWQDTHFWNANTKSYEAQMHHSFTEGLHDEHIGFDIALDDALVSQIYQSYDPAQAQSLQVRFTLTDLAQNAETVTNNNVVEAQLPLYFFNNDSQPVVQQLARSGASIASVGLANLNFEKSYDKSYGDQSKFSVGVDLSGQLFIVPTGDPGGRITGEGVVEAYFFNAHNTLFKISYDGSAYVSGQNTGYASEMIIFNNIVFEDESYTAKYEKAWEKSWEENKVLAQARFTIGPVPMSVEAGVSGGLGFALTVGYNAELYAEGNLFHVDFGAFGRGGVNLGLVSAGVQAILTLIDNTFAMESKAGFAFVSSEVNKPHIYYALELKNDLDVISGKFGLYAETIGVKWCKKFGIPYPCGKKTNHYDLWLYQTNSVFNKSWTLYSTEGDIEI
>NZ_AP021846.1|WP_152085153.1|829520_830675_+|DUF1343-domain-containing-protein
MRPVTIFATLFLFLVPYISSASQVGAERYDQYLPLLTNQRVALVVNQTAQTQDGHLLDSLLARGVNVRKVFAPEHGFRGDHDAGAKVDSSKDSKTGLPIVSLYGKNKKPTAEALEDIDIIIFDIQDVGVRFYTYISTMHYVMEAAAENDKQLIVLDRPNPNIAYVDGPILEPEFRSFVGMHPIPVLHGMTVGELAKMINAEGWLSSNKALALSVIPVADYSAAVRYDLPIKPSPNLPNAQAIALYPSLCFFEATPVSVGRGTTMPFQMFGHDKVKLGKFSFTPRPILGAASNPKLNGKVAYGMNLTEVETQGLDLTWFINAYHAFDSKDETFFTHAKFMDKLAGTDKLRLAIESGQSLVEIKKSWQADLAKFERRRQPYLLYAR
>NZ_AP021846.1|WP_152085154.1|830671_831520_-|SIS-domain-containing-protein
MSTFVKIKALKPSLSSSEAKLADFTLNSGSKIRFLSSVELARQAGVSQSSVVKFAQKLGYKGFPAFKLAVIDDLNLQALQPESINTQILHSDPIELIAKKLLSNQQNILHETHKLNDAMQFEKAIVTIKSAKKILLCAVGGSFPMAQDFALKLQKLGLPAIAQTDELSAASYMATMGKDDLLIAISDSGQSKAVLRVAKQAKNNGCTVLSLSRYGNNPLNEMSCIQLFNVIGDEPVKHASILTRTSQSYLIDVLFTGLTQSNLRWQKRAERANEHMYDIRHA
>NZ_AP021846.1|WP_152085155.1|831747_833124_+|sodium:proton-antiporter
MTWYSILPPLIAILVVFWRKEVILALLLALISSEFLLLMQHNYSQLLMTPVNSIERIIAVVTSSGNARILIFSLVIGALLAYIRESGGVAATVNMLMNRGVAKNKRQVGLLTMFTGVAVFIESNMSVLTSGIVSRGLFDKFKMSRARLAYIIDSTSAPVCILILLNGWGAYVLGLLSNYELEQSAVSILWGSVAFNFYAIIALLIVLYTIVFDKVHGPMKEAEQQLQKQQVELDSGPKATKARFMLLPLITLVGSMIGFMFWTGNGILANGSGSKSVLYATVLATALAYVLLLGAKRFTHQQLVDVGFKGMGELLPLVTIVLLSLTLGASLKDLGTGVFVASLVGDYLPIYFIVPVLFLAGAVMSFTTGTSWGTFAILIPIGVPLIQALGLPPALVMGAILSGGIFGDHCSPISDTSAVSALASGCDLLTHVKTQLPYALVGGALALICFFIASVIMI
>NZ_AP021846.1|WP_152085156.1|833120_833711_-|hypothetical-protein
MNDEQLDKLLKEEFDAQKRQNKLSKKQLAQFKTACKKPKDKSPWATMQWVCASIGAIFLAHLLYSEYDKTVHPLHTLNLNDYQQVEIHTIKNGQYSLSRVTAKQHLDDSLAKDTQTLKQLYSGRGQLIEKHTNTWVIADCQQQTLLEVSAQLVAQLTKHNAFEENKVGTMVAFEKNFKGQLVSLAALDIGKVQQCG
>NZ_AP021846.1|WP_152085157.1|833700_834246_-|sigma-70-family-RNA-polymerase-sigma-factor
MLIALKSWFVDQAPPDDALLAYKQSGDNKYLELLIEQHSQDLYHFLRSHSNDVLANDICQKTWLTIMEKKHHYEASHSPKAWLFKVARNALVDEVRRQRRGCALDEHTLIDTQVIFEPATDLSTAITQLPFLQKEALSLQLEGFSLKEIAQITQSNIETIKTRLRYARQQLKQVLGENHER
>NZ_AP021846.1|WP_152085158.1|834282_834918_-|TonB-family-protein
MYVFEAQNDSLNYKKLLVAVLGGTAMTAAAFAFMEQLVSQDEIHIAQPKPIIPIELGQVKKDTPPEEKPKLPEPPKIQPPPTKVVNNTPPTTEISTATPYAPQVPVPKMTLSPPTMMPTEGNATPIVRVEPKYPITAARDGIQGWVKLAFSISPNGEVIDINVLDAEPKRVFERSAIAALKRWKYRPKIENGQATLQTNQNVVLEFNLAQQ
>NZ_AP021846.1|WP_152085159.1|835045_835552_+|DUF3087-family-protein
MQLQKIDKARYRNHLNKVIVACVASLTMGSLGISQTLIALFPDPDGSHFHWNLLGVIVSVVVIGFVLKKYRTHPFMYEVNYVWELKQALNKVTRKMPKLKKAAQQGDVEAMLAMQFSYSGSKQLWELDDNTITLDDLSIWQSQLDTLAAQYHVQLNLAQYNESTLKKF
>NZ_AP021846.1|WP_152085160.1|835674_836301_+|GTP-cyclohydrolase-II-RibA
MAEVRARVQLNVGQHSHIPAEIVSFSGLKDGHEHVALIFNKADTEQTTPLIRMHSECLTGDVFHSSRCDCGEQLNECIESMHKQGGVLLYLRQEGRGIGLYNKIDAYVLQSQGMNTYEANNHLGFADDLRDFSDAVLMLKALGLHQVKLMTNNPNKLNALREAGIEVEAVIGTQAHVKSGHVGNRSYLETKVKHGAHMLDIKKVSKPK

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Crispr_ID: NZ_AP021846_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_2

849290-849399

Orphan

Consensus_repeat	Method
TAGCATTGAAAATCCTAGTTGTTTTTTAATGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021846_2

>merge|NZ_AP021846|2|849290-849399|CRISPRCasFinder
TAGCATTGAAAATCCTAGTTGTTTTTTAATGTGATATAAGGTTTGCCCAGATAGCTCAGTAAGTAGAGCTGTTAGGGATAGCATTGAAAATCCTAGTTGTTTTTTAATGT

>NZ_AP021846|2|2|849290-849399|CRISPRCasFinder
TAGCATTGAAAATCCTAGTTGTTTTTTAATGT	GATATAAGGTTTGCCCAGATAGCTCAGTAAGTAGAGCTGTTAGGGA
TAGCATTGAAAATCCTAGTTGTTTTTTAATGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152085162.1\|837192_837657_+\|RecX-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|234646
NZ_AP021846.1\|WP_152085174.1\|854365_855025_+\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|227020
NZ_AP021846.1\|WP_152085176.1\|864845_866150_-\|inosine/guanosine-kinase	unknown	unknown	gnl\|CDD\|185033
NZ_AP021846.1\|WP_152085166.1\|842925_844707_+\|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha	unknown	unknown	gnl\|CDD\|237592
NZ_AP021846.1\|WP_152085173.1\|853444_854347_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223301
NZ_AP021846.1\|WP_152085164.1\|840268_841471_+\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_AP021846.1\|WP_152087505.1\|866393_866897_+\|tRNA-adenosine(34)-deaminase-TadA	unknown	unknown	gnl\|CDD\|182786
NZ_AP021846.1\|WP_152085167.1\|844716_845847_+\|sodium-ion-translocating-decarboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|377182
NZ_AP021846.1\|WP_152085163.1\|837661_840265_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_AP021846.1\|WP_063359311.1\|841572_841764_+\|carbon-storage-regulator-CsrA	unknown	unknown	gnl\|CDD\|234973
NZ_AP021846.1\|WP_152085171.1\|850875_851793_+\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880
NZ_AP021846.1\|WP_152085169.1\|846190_848977_-\|response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_AP021846.1\|WP_152085165.1\|842676_842913_+\|OadG-family-protein	unknown	unknown	gnl\|CDD\|235161
NZ_AP021846.1\|WP_170829113.1\|866887_867046_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085172.1\|852187_853435_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085168.1\|845950_846133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085175.1\|855162_864738_+\|tandem-95-repeat-protein	unknown	unknown	gnl\|CDD\|374418
NZ_AP021846.1\|WP_152085170.1\|850421_850778_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|238308
NZ_AP021846.1\|WP_152087504.1\|841802_842270_-\|YcxB-family-protein	unknown	unknown	gnl\|CDD\|379553
NZ_AP021846.1\|WP_152085177.1\|867136_868504_-\|membrane-bound-lytic-murein-transglycosylase-MltF	unknown	unknown	gnl\|CDD\|236778

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152085162.1\|837192_837657_+\|RecX-family-transcriptional-regulator	gnl\|CDD\|234646	PRK00117, recX, recombination regulator RecX; Reviewed.	4.81221e-38
NZ_AP021846.1\|WP_152085174.1\|854365_855025_+\|tail-fiber-protein	gnl\|CDD\|227020	COG4675, MdpB, Microcystin-dependent protein [Function unknown].	2.90236e-30
NZ_AP021846.1\|WP_152085176.1\|864845_866150_-\|inosine/guanosine-kinase	gnl\|CDD\|185033	PRK15074, PRK15074, inosine/guanosine kinase; Provisional.	0
NZ_AP021846.1\|WP_152085166.1\|842925_844707_+\|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha	gnl\|CDD\|237592	PRK14040, PRK14040, oxaloacetate decarboxylase subunit alpha.	0
NZ_AP021846.1\|WP_152085173.1\|853444_854347_+\|hypothetical-protein	gnl\|CDD\|223301	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].	3.27231e-08
NZ_AP021846.1\|WP_152085164.1\|840268_841471_+\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	9.38086e-179
NZ_AP021846.1\|WP_152087505.1\|866393_866897_+\|tRNA-adenosine(34)-deaminase-TadA	gnl\|CDD\|182786	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional.	3.69554e-84
NZ_AP021846.1\|WP_152085167.1\|844716_845847_+\|sodium-ion-translocating-decarboxylase-subunit-beta	gnl\|CDD\|377182	pfam03977, OAD_beta, Na+-transporting oxaloacetate decarboxylase beta subunit. Members of this family are integral membrane proteins. The decarboxylation reactions they catalyze are coupled to the vectorial transport of Na+ across the cytoplasmic membrane, thereby creating a sodium ion motive force that is used for ATP synthesis.	0
NZ_AP021846.1\|WP_152085163.1\|837661_840265_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_AP021846.1\|WP_063359311.1\|841572_841764_+\|carbon-storage-regulator-CsrA	gnl\|CDD\|234973	PRK01712, PRK01712, carbon storage regulator CsrA.	2.20096e-35
NZ_AP021846.1\|WP_152085171.1\|850875_851793_+\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	1.34292e-177
NZ_AP021846.1\|WP_152085169.1\|846190_848977_-\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	4.69336e-92
NZ_AP021846.1\|WP_152085165.1\|842676_842913_+\|OadG-family-protein	gnl\|CDD\|235161	PRK03814, PRK03814, oxaloacetate decarboxylase subunit gamma; Provisional.	1.14994e-15
NZ_AP021846.1\|WP_152085175.1\|855162_864738_+\|tandem-95-repeat-protein	gnl\|CDD\|374418	pfam16184, Cadherin_3, Cadherin-like.	1.76006e-21
NZ_AP021846.1\|WP_152085170.1\|850421_850778_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	1.11906e-20
NZ_AP021846.1\|WP_152087504.1\|841802_842270_-\|YcxB-family-protein	gnl\|CDD\|379553	pfam14317, YcxB, YcxB-like protein. The YcxB-like protein family includes the B. subtilis YcxB protein, which is a functionally uncharacterized transmembrane protein. This family of proteins is found in bacteria, and is approximately 60 amino acids in length.	0.00476085
NZ_AP021846.1\|WP_152085177.1\|867136_868504_-\|membrane-bound-lytic-murein-transglycosylase-MltF	gnl\|CDD\|236778	PRK10859, PRK10859, membrane-bound lytic murein transglycosylase MltF.	0

>NZ_AP021846.1|WP_152085169.1|846190_848977_-|response-regulator
MQNSARIKISGLTPLIIATAILTGAICAVASYLLPENRPIPQLEIQAAKISSPITSLMVKSSFDDAKKMLESIEYASNDVEYFLYSNTGVSEPTLVYQSSPNNVPALSRLDTINDKQQIITHQPLYMDGQLVGELVLRYQKAKSSTLSWLSYLAFAVALLLAIFMAWFSNRCIGRDLIKHNQQIQDELQRIIDNQDYRTHISADLGLGLDNIAKLINLLLEQIQTAIDSDQAVHKELKQLQTSLETEVQARTLALEKATLNAERASEAKTTFLATMSHEIRTPMNGVIGTIDLLRQTELDGAQHRLSTIIRDSAFSLLGILDDILDFSKIEAGKLQIDSSPFSVTETVEEVARVLSSVAKKRKLDLQLSIAPDIPTNLVGDTVRVRQVLYNLCSNAIKFTSTDETKQGYVKISAEVAQNTSEHYTLRFKVVDNGKGMNQSQLREIFNPFIQAEGSITREFGGTGLGLSICKSLIELMLGSINVTSDIGMGSEFVVELPFSTSGQVKYANKAVLNQKEVVVLTDDTSRQKTVSRYLSFMGAKVSVLSTSANIDEYQYKSSIIWVLDGLDSMEKINDQLRALLYSLENNNQQIVVLSTMDDAAINHKNIFYLNAAPLCKTSFMTAILVAAGLHKPKQLKPTRTLNNYLSVEQAKEENKLVLLVEDNILNQQVLTDQLHLLGYGVEVAENGEQGLEIWKGGHYPVILTDLHMPKMSGYDMVKEIRDIAEQSEDINAQPYIIAVTANALKGERERCLSAGMNDYITKPVELNVLEETLQKYLKTLPNDEMTDSDEQDDDELFEVDGHAEQSQEAQPIDLETLSKYVNHDEAKQRRFFKMYLEQSSQLTREIYGAVISCEQSVIIESCHQLKSISKTIGAEQVAEIAIEFESQCKANTLSSDELIALRNKLDKAYTQATEFIQKYLESAASEG
>NZ_AP021846.1|WP_152085168.1|845950_846133_+|hypothetical-protein
MNIIVILLSLIIALVILVPLLERYQHRLGLDKMQRYGKYVLPLIMVSLVIKLLYMLWYEG
>NZ_AP021846.1|WP_152085167.1|844716_845847_+|sodium-ion-translocating-decarboxylase-subunit-beta
MEGLLNLWHATGVANFTIPALVMMAVGCGLLYLAIAKGFEPLLLVPIGFGAILTNIPVAGLAEPGGLLYYVYYIGIDSGVFPLLIFMGVGALTDFSALIANPRMLLLGAAAQFGIFATLFGAIALNYVPGFEFTLQDASAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPIIQPPIMRALTSEQERNIEMPQLRVVSKKEKILFPMVVLSLTIMFLPAATPLVGMFCLGNLMRECGVVDRLSNTAQNELINITTIFLGLAVGSKLAADEFLTVETLGILVLGALAFSIGTASGVFMAKLMNRLSSNPINPLVGAAGVSAVPMAARVVNKVGLESNPHNFLLMHAMGPNVAGVLGSAVAAGILLALVG
>NZ_AP021846.1|WP_152085166.1|842925_844707_+|sodium-extruding-oxaloacetate-decarboxylase-subunit-alpha
MSQLKLTELVLRDAHQSLLATRMRLEDMLPIAEKLDKAGYWSVESWGGATFDSCIRYLGEDPWYRIRALKEAMPNTKQQMLLRGQNLLGYRHYADDVVEKFVERAHHNGVDVFRIFDAMNDIRNLETAIRAAIKVGAHAQGTISYTVSPVHTLDMWLEQAKKLEEMGCHSICIKDMAGLLKPYDAEQLISGLKSTVSIPIAMQCHATTGLSTATYQKAIDAGIDMLDTAISSMSMTYGHSATETMVAITEGTARDTGLNLAQLEEIASYFREVRKKYAAFEGSLKGVDGRILLAQVPGGMLTNMENQLKEQGAEDKLDAVLKEIPSVREDLGFLPLVTPTSQIVGTQAVLNVLTGERYKTITKETAGVLKGEYGATPAPVNAELQLKVLDDAQAITCRPADLIEPELDSLETELLGLAKGEELQLADAHIDDVLTYALFPQVGLKFLKNRNNPDAFEPKPSLVKAAEEQAQASASNSSNKAPERYSVQVDGKVYDVVVAPGGELQEVKVKDSELIPQSASVSSSETMNAPLAGNIFKIKVKPGDQVDKGDVVLIMEAMKMETEVRATHSGCVSQVLVREGDSVATGDAILALS
>NZ_AP021846.1|WP_152085165.1|842676_842913_+|OadG-family-protein
MDIVSLLLQAANLMLTGMVGVFVFLSILIFAVKNLAKLAGSELSNDTPTKATSKSSAGVSNAHIAAISAAVAQYRIKK
>NZ_AP021846.1|WP_152087504.1|841802_842270_-|YcxB-family-protein
MMFTEKFTLDKNYFTECFEESVAFSDKAKPKYPLLVFLILLSGLAWFVLEKPYVASFIALVALLEVVAFVYRKPWWITRQMLSRASGSLVTLQIDERGISAVNPYKQYQLTWQDVQQAHKTNKGVVLKTKHGMQYISKAVISPESFDYILEQTKI
>NZ_AP021846.1|WP_063359311.1|841572_841764_+|carbon-storage-regulator-CsrA
MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKDVSVHREEIYMRIQAEKSNPSTGNM
>NZ_AP021846.1|WP_152085164.1|840268_841471_+|aspartate-kinase
MALIVQKFGGTSVGSIERIEAVAEHVIKTQQQGHQVVVVVSAMSGETNRLLNLAKQIDEVPSARELDVLLSTGEQASIALLAMAIIKRGHSAVSLLADQITIKTDNMFGRARVEHIDTQRLKQELEHNRIAIVAGFQGRDSEGNITTLGRGGTDTTAVEVAGVLHADECQIYTDVDGVYTADPRMVNDARRLSKISFSEMLELASLGAKVLHLRSVEAAGRYQIPLRVLSSFKPDQGTLISYKEQCMVDSAVTGIATNKDIVLYQCSISEPATLSQFLSALAKLQVEVDMLHQWCRQADILGYAFTVHRNDHLAVLALLQSEPFAHTINDVVFELNQAKVSLVGMGIKSHPEVLASALTVLADQDIYPKLMSTAEIKASFLVSETQLHGAVNQLHVTFLR
>NZ_AP021846.1|WP_152085163.1|837661_840265_+|alanine--tRNA-ligase
MQHMTTAQIRQAFLDYFAKQQHQVVPSSSLIPGNDATLLFNNAGMVQFKDVFLGAESRPYSRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIKFAWQFLTDVLQLPKEKLLVTIYHSDDEAFDIWHKEVGIEADKIIRIDTADNFWSMGDTGPCGPCSEIFYDHGEHIWGGRPGTPEEDGDRFIEIWNLVFMQYNRHADGTMEPLPKQSVDTGMGLERISAIMQGVHSNYEIDLFQGLIKAAAEVTNAQDLEDKSLRVVADHIRSCAFLVSDGVMPSNEGRGYVLRRIIRRAVRHGNKLGAKGAFFYKLVAALIEQMGQAYPELAKQQAIIEKVLRIEEEQFGKTLDRGLAILEESLVGIEGDVIPGELVFKLYDTYGFPADLTADVARERFMTIDEKGFQECMEVQRKKAQQAGKFGADYNEQLKSEKTTDFKGYDAVHYSGTVVELFHEGQAVSVLEDGQQGIVVLDRTPFYAESGGQVGDTGALKVANGEFVVTDTTKLGNAFAHHGTVTGRISVNEKVEAQIDASRREDIKKNHTATHLVHEALRQVLGEHVAQKGSLVMPDRLRFDFSHFEGVTKQQLREVEKMVNAQIRANFALNTELMDIDAAKEKGAMALFGEKYDDEVRVVSIGDYSIELCGGTHVKRAGDIGLFKIVSEGGIAAGVRRIEAVTGAEAFNYVAEQEQQLNDIAALLKGDMSNVLDKVTNLLEKNKGLEKQLSQLNDKLASAAGASLLESAVDVNGIKLLVANVAGTESKALRGMVDDLKNKMGSGVIALGVANGDKVSLIAGVTKDLVGQVKAGELVNHMAAQVGGKGGGRPDMAQAGGSEPQNLDAALASVTQWVAEKTQ
>NZ_AP021846.1|WP_152085162.1|837192_837657_+|RecX-family-transcriptional-regulator
MDESEQQKLKNYVLWLLGRQEYSKKELKQKLKAKQADDDFIENLLQWCESLGYVDDNRYCESFLRRQLNKGLGLKRVLAEAGNKGVDRALLMELIETQEVDWFELALDVYVRKFTSTPKQLDYKEKAKRVRYMMYRGFSYEEIDFAMQAATMGE
>NZ_AP021846.1|WP_152085170.1|850421_850778_+|ribosome-associated-translation-inhibitor-RaiA
MKINLSGHHVDITDAVRAHVQEKFAKTATHFPSLLSLDIIISKDNKKFNAEISTTYSGVRIGVKGEGDVMYPAIANAAKKLDASLKHRKGQLKANLHDKPVSTTPEIAHEIIQEMDLR
>NZ_AP021846.1|WP_152085171.1|850875_851793_+|glutaminase-B
MPNYQTVLDATFTHVQPLLNKGKVADYIPALAEQELGQFAMALHTNDGQTFTAGNCNARFTVQSVSKVMTLTMALQRYEDELWQRVGKEPSGTAFNSLTQLEFENGIPRNPFINAGAIVTCDALFSRLSAPIHTMLEQYRSQSGNEKVVINKRVAQSEFEHRYRNAAMAYLMKSFGNFTNDVEEVLWSYFNYCAIEVNCTELARTFSYLSNHGFCSQSQQQLLSAKQTKQLNSLLFTSGLYDAAGDFAYRVGMPGKSGVSGTIIAVVPGQFTVAVWSPGLDKFGNSVAGIAALEYVSEQLGTAIF
>NZ_AP021846.1|WP_152085172.1|852187_853435_+|hypothetical-protein
MASNSRETQSLMSKTHELSSIDPSLAKLLNQSLRDQLSRQLKGDAFASSEVLIKHCCKLVECLLAKTQTHEQLVECFADFSQSLIELYQSLELTEQETTHSYVNATGLVMAVKDAVSTVNDIYRVKAFIRALKHTLDDAESQSSQPLHLVYPACGPFAPLVLPLLCYVKKHNTHQRPLKITLIDIQPGAEKVLKRTVESLGLDLHSVDVLCMDVMDYKPSLPIDILVIEAMQHGLSKEGHLSFMRHLTPFLSEDAYLLPKEIVVEAMLAVPQREFVEQWQEQERSHSSFINEQIEAERINLGPIFTLNLDTLKHITTMPLGNGFDLIEAGQVTIPQNVHDMPKRILLLSAKLHVDGQEQVAQYDSGITHPLADMSVCIDFKPHASEPDDLLVKGGDKLKFYYKLCGMPSFLPTIA
>NZ_AP021846.1|WP_152085173.1|853444_854347_+|hypothetical-protein
MKKIVLIACSASATPAIECLAQMNALAGVLSVHCPESVAQQHMAVAQHFGVPHAFQGNLNGDVLSSAKQNWQGDEFISYHLPYELLRNVQSEQNVVQVQVAQYSNATVEHALFQTIHSQQSHCVLSAVSIKHQQVLLSHSVVVESEDTAGTLHKKLLTQLPSLLQQLVSEFDSLYDTQPFVQFAPETLSSLDESHLFANLQTDSAERIINLTRAANPYFGGARLRIGKAVCQLMQVSLLDQPTFGVKAGTVVALSKSDGLIIALSNEQALKLDVVSSAEGIFDGYRFAMQAKLQAGMNLK
>NZ_AP021846.1|WP_152085174.1|854365_855025_+|tail-fiber-protein
MSAEPKIGDIEMVGYHFVPRGYFPCTGAQVNIATESTLFSLLSTAYGGDGRVTFGLPDFRGRAAVGDGYGPGLTPRVQGNLYGVEHIHLDVSQMPSHTHLAVADAQATTAVEGFAGTLTVNAKNGLGDTDKAEGAYWATGEVVNGLAKTPISKAYSTTSDVKMAQDAAEISGTFHGVRTAVEVDVRLEDTGGTMPIFNCQPSSVTKFVIANIGLYPTRS
>NZ_AP021846.1|WP_152085175.1|855162_864738_+|tandem-95-repeat-protein
MNVKQMFNVLSALIFASIFLVGKAYAAQTISFDNIGETDSGGTGFRTVTGHSGYLVPNSLIDYGIKSINPYIAGSPQTFIFKADGNNVTHFDVTDIKIHAYGSILVELTKATQVVFKNANGDTLSTLKLSDKTRLSNSTSAGLADLFGSFDPVAGVSSIEFTVFESGQGNLIYNVSFLSLVVDNVNAQLNSAPTVSGAPSDISVLEDTTTNLNLSAVEFADAESDALTVTLTVNNGTFESLSSAGTLTSRALSSDKKMITLVGSAANINAFLDTASNITYKSAADASGDNQALITITANDGTNNLASNPTVNLDITEVNDAPTLSLGSNISTGGDAAAGNQQVVANFASMSSDGDANAVQSVSSYLVSEQSDANNVVSNISINTSGQLSYTPAVNVSGTATIAVQVQDNGGTANGGVDTSAAKTFTITVDTVKPTVSSVTTSPNASYKANDNIDFVVNVSEALDVITTSGTPRIALKVGSTTRYASYHSSNSSKTALTFRYTVQAGDNDTDGLELGSVVDTNSGTIQDASGNSLNVSLANVADLTGIRVDTTQPKVSSLTPPSNKTYILGETLDFTAQLSEAVTLNTSAGKPQLNLTIGSKTVALDTSTTTSPTSQLQFSYTVVQGDEDLDGIRITSFALNNATLNDTAGNTFDTTLSSVNTDNVLVDTIAPTVSSVSSSKADGTYKVGDEIAIQVTFSENIAVTGTPTLTLETGDVDRVVNFTSVSDSVVTFNYTVQTGDVSSDLAYISTTALSLNGGTIKDAAGNEATLTLATPSAANSLSANKALVIDGVAPSIDTAGSSTANSGFGVSASGGLTLKFSEAMKLGSGTITLVDSNGNVIETFTINGNTVTGSNGGTVSLSNNNDTLTINPGANLSAGVSYAVRMDSGFLTDQNGNAFAGFSDDSSFAITVAPNVELSVDNTTISEKGGIATVTLALKDAAGNAVTATNAVTVSIDITGTATGSGTDYSVSDNISNSVTIAAGTTSKTFTVTAVDDSVIDDNETVIIDISAVTTNNAVESGTQTVTITLDENDAPAFASLDGTPTFTENGSAVVLDANATVSDTELDALNSNNGNYDGASVTIVRAGGANGSDVFANTGSLGVLVEGQNFEYSSVAVGTVTTNSAGTLKLTFNSSATTSIVASVLQSITYSNSSEAPGTSATLAWTFSDGLASSKGTNQTVVSITEVNDAPTLDDTQTPVFTTILEDVTDANNAGVDIASLVVDNSIGDLDGSAVEAIAVIGIDNSNGMWQYSTDNGSNWSDFSTTSSQSVDLTSAARLLDGTLTTTSTHKVRFVPGANYNGSATMTFVAWDKSTGTAGDVADVTAKGGISAFSNRSDTAAITITAVNDAPLVAINTGITLLEGGTTTITKTRLNEGDVDDSGAGLTYTLTTAPNNGTLFVDTDIDGTLDTGEALNINSTFTQQDIDASRLKYSHNSSDTTSDSFVFTLADGGEDNVTPLTGQTFNFTVTPVNDAISITTPPTDVTVTEDASSNLDLSALTLIDSDSTNVTITITVNNGKFGTPADGAGQGVTASLSQDGRTITLTGSPTAIDTYLNTVSNLTYLGVANSQGDNQATIIITGNDNNGSGSVELATVNVDISDVNDAPVINNLNGEQFDYNASAQNFVIVNQNSAVTVTDIDTDTFNGGVLTVSIASGAQAAEDVLAIDDSSTEISLNNGQVEFNQTNVGSYTGGSNGNDLVITFNNNATNATVAAILNAIEYDNSQDSTGTAGNRVVRFILTDGEGGTSASADVSINLTVNIAPTLSMARSLTFTENAAATVVDAQATANDPDGDTNWQGSGAKLVAFISANGLAEDSLSIDTSGDFSISNGQLSYQNTVVGNISDTSGVDNDGVVTGGDSLTVLLTASTNSITQALVRALSYANSSENPAVSARELTVQLTDSLAGAVSTKMAINVIAVNDAPTITGTPTRFVAQDQPYRFTPTGSDIDSAALTYSVQNLPAWLSFNTTTGLLSGTPSNNNVGVFNNVIISVSDGELSTSLDRFDITVTNVNDAPVITGTPATTANERQPYSFTPTAADIDGDLLSFSIANKPTWASFNTATGTLSGTPVQNDVGTTADIVISVSDSQLQASLPPFSLQVNNVNDAPTISGQPLTSVVEGDSYSFTPEAQDIDSATLVYNIINKPVWASFNAQTGELSGTPSSDDIGVTTNITISVSDGELSASLKPFSLRVSVRNTAPKASAQTVLVEEDASANIKAKVTDEQGDKLTLMVQNQPQRGMLRVIDGGWIYTPNANFNGQDSFAYVASDGELVSELATVTVTVTPVNDAPLAMDDLITLTETANDTYELAVLGNDADIDNDTLRIEGVTASIGNAFSTGSTISYKAPADFIGPVSLSYSVTDGNKGRDNAKVSLVIEGNRNTQAPTLTVPDELTVNATGLFTKVNLGVASASDAQGNVLPVSLVDSRTVFAPGKHNVYWQTQDSAGLESIAQQTLNVKPLVSLSKDQVVSEGVTVTIQVLLNGPSPTYPLEISYTIGGTASADDHTAQSGSVTINSGTQAQISFDTLVDELAEPEETVVVTLASDLNLGSQQQTVIRIRESNIAPTVSLSAQQQGEARMTVSQDDGVVTINATAKDVNLADQLTVSWLSDLANISSDQSSFMFDPTATSLGVHAVKAIVTDSGMPALSATETVYIEVIEQLAALSDVDTDGDLIPDSEEGYKDSDGDGIADYLDAIDECNVVPAQVSNQAAFLAEGDPGVCLRRGAVAALSNTGGLKLESDEQQGIVRDPQAKNIGGIFDYIAYGLPEQGQNYNLVLPQQLPIPANAVYRKYTQAKGWSEFVEDENNQVFSTAGELGYCPPPGDAQWQPGLTEGYWCVQLVVQDGGPNDADGEANGTVVDPSGVAVYLNDNTQPVANEDSANLPWNSSIEIDVLANDNDADNDSLALSQASAQFGVVKITAQQTLKYTAADNFVGADVITYSITDGQGGTAHSQVLVEVVGNRAPVVQGEQTTTLHHKQVEIDVLANDSDPDGDKLTVTMANADNGAVTILGGDKLTYLPNVGFAGVDTVRYVVSDEQGASSNGSVQVLVTENRLPVTQPDVVQVDSGATINIDVLANDSDADGDTLSVVEVSAIQGSVSIQQGGVLVYTAKTEFTGGDTISYMVSDGYGEPVAGTVSVTVNAPSSNQGGDNDQGGSDQGANYHSKSSGGGLLWLYVFMLVAAIKRRTR
>NZ_AP021846.1|WP_152085176.1|864845_866150_-|inosine/guanosine-kinase
MKFPGRRRHKHYFPVEDKDPLINQLGNDNGLKRSYICGIDQIVVDIEAKVDQAFLDEFGLQRGMSQVIASDITNALYERLKRDDMIEYEFAGGTIGNTMHNYSVLADDRSVLLGVMSENITVGSYAYKFLCNTSSRVDLNHLQPVDGPIGRCFTLIDNTGERTFAISAGLMNYLRPESISQSLIENASALVISAYLMRTSGDETMTQATMQAVHYANQAGVPVVLTLGTKFLIEQDPSWWAEFVHKHVDILAMNEEEAEAITGLSDPLLAADKALDWVDLVICTAGPKGLFMAGYVDDKFKRETEYPLLPGAIAEFNRYEFSRGMRKADCQSPIRAYSHTAPYMGGPDTIKNTNGAGDCALAAVLHDLSANEYHKLNVPNSAKHEQTAITYSSLAQISKYANRASYEVLVQHSPRLSRGLPEREDSLEQSYWDK
>NZ_AP021846.1|WP_152087505.1|866393_866897_+|tRNA-adenosine(34)-deaminase-TadA
MSEIEQDQYWMSQALMYADKAELQNEIPVGAVVVKDDQLIAAGWNQSICNHDPSAHAEMQAIRKAGQALENYRLVDCTLYVTLEPCPMCAGLLVHSRLKRVVFGAKDAKTGAAGSIMNIVREPQLNHQLEVTEGVLADECAEKLSAFFRRRRKEIKEAKKKQKAAQG
>NZ_AP021846.1|WP_170829113.1|866887_867046_-|hypothetical-protein
MLKRRRTHQFKRNTRHTSPNRRRVMLKNAHKKVLLRRKLFALLQMEEMAAQP
>NZ_AP021846.1|WP_152085177.1|867136_868504_-|membrane-bound-lytic-murein-transglycosylase-MltF
MRIVKFVLIAAFFCMLLGCEQASTNQLERIKHKQVIRVGTLAGPGNYFQARHGEQGYEYELSAEFADFLGVELQMVPFFSLSELFERLDNGDLDMIASGISYHPKRAARYKFGPSYRSISQKLVFKQGRTRPRSFDDIDKPITVLANSSHILTLQEFKPQYPDLTWQAVTDKDEEELLLGIIDEQIDYTIADSHTLALFRRYHPTVSIGFSVTRDDPVSWVLRNDDDDSLYALLLPFFNELKHTDVLYTLEEKYYGHVSTFNYVNALAFVEAAHEVLPTYAAWFKQYAKNIDWRLLAALSYQESMWDPRAKSPTGVRGIMMLTLPTAKQVGVTNRLKPEQNIRGGAKYLAKLLKRIPARIPQPDRTWFALASYNVGWGHVNDARIITQQQGADPDSWADVKKRLPLLIKKRYYRKTKYGYARGDVAVQYVDNIRRYYDALVWLDENNALSISSGK

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Crispr_ID: NZ_AP021846_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_3

1830928-1831035

Orphan

Consensus_repeat	Method
TACTTAGGACAGTCACTCTAATTTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021846_3

>merge|NZ_AP021846|3|1830928-1831035|CRISPRCasFinder
TACTTAGGACAGTCACTCTAATTTCTCCATCCCTCACTTTACATTTAGTGATAAAATTGACCTAACAGAGATCATTGGGTAATACTTGGGACAGTCACTCTAATTTCT

>NZ_AP021846|3|3|1830928-1831035|CRISPRCasFinder
TACTTAGGACAGTCACTCTAATTTCT	CCATCCCTCACTTTACATTTAGTGATAAAATTGACCTAACAGAGATCATTGGGTAA
TACTTGGGACAGTCACTCTAATTTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152085890.1\|1837158_1838286_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_AP021846.1\|WP_152085888.1\|1832054_1832237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085879.1\|1821320_1822085_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|182637
NZ_AP021846.1\|WP_152085893.1\|1842909_1843281_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_010363446.1\|1820732_1821011_-\|LexA-regulated-protein	unknown	unknown	gnl\|CDD\|183272
NZ_AP021846.1\|WP_070985548.1\|1821013_1821235_-\|DUF2788-domain-containing-protein	unknown	unknown	gnl\|CDD\|378526
NZ_AP021846.1\|WP_152085881.1\|1822780_1824418_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|236050
NZ_AP021846.1\|WP_152085887.1\|1831245_1831743_+\|DUF2867-domain-containing-protein	unknown	unknown	gnl\|CDD\|378548
NZ_AP021846.1\|WP_152085885.1\|1828050_1829616_+\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237000
NZ_AP021846.1\|WP_152085884.1\|1827063_1828041_+\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|185502
NZ_AP021846.1\|WP_152085882.1\|1824525_1825560_+\|succinylglutamate-desuccinylase	unknown	unknown	gnl\|CDD\|235408
NZ_AP021846.1\|WP_152087544.1\|1833930_1835253_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|224149
NZ_AP021846.1\|WP_152085889.1\|1832509_1833484_+\|transposase	unknown	unknown	unknown
NZ_AP021846.1\|WP_152085892.1\|1839732_1842705_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380078
NZ_AP021846.1\|WP_152087545.1\|1839041_1839647_+\|DUF998-domain-containing-protein	unknown	unknown	gnl\|CDD\|377627
NZ_AP021846.1\|WP_152085883.1\|1825846_1827064_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|238958
NZ_AP021846.1\|WP_152085880.1\|1822213_1822771_+\|replication-initiation-negative-regulator-SeqA	unknown	unknown	gnl\|CDD\|236874
NZ_AP021846.1\|WP_152085886.1\|1830489_1830876_+\|DUF4267-domain-containing-protein	unknown	unknown	gnl\|CDD\|372907
NZ_AP021846.1\|WP_152085824.1\|1835672_1836820_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_AP021846.1\|WP_152085891.1\|1838415_1838895_+\|DUF1203-domain-containing-protein	unknown	unknown	gnl\|CDD\|377693

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152085890.1\|1837158_1838286_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.23034e-34
NZ_AP021846.1\|WP_152085879.1\|1821320_1822085_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|182637	PRK10673, PRK10673, esterase.	4.46648e-91
NZ_AP021846.1\|WP_010363446.1\|1820732_1821011_-\|LexA-regulated-protein	gnl\|CDD\|183272	PRK11675, PRK11675, LexA regulated protein; Provisional.	2.49786e-43
NZ_AP021846.1\|WP_070985548.1\|1821013_1821235_-\|DUF2788-domain-containing-protein	gnl\|CDD\|378526	pfam10981, DUF2788, Protein of unknown function (DUF2788). This bacterial family of proteins have no known function.	5.32576e-12
NZ_AP021846.1\|WP_152085881.1\|1822780_1824418_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|236050	PRK07564, PRK07564, phosphoglucomutase; Validated.	0
NZ_AP021846.1\|WP_152085887.1\|1831245_1831743_+\|DUF2867-domain-containing-protein	gnl\|CDD\|378548	pfam11066, DUF2867, Protein of unknown function (DUF2867). This bacterial family of proteins have no known function.	2.54254e-48
NZ_AP021846.1\|WP_152085885.1\|1828050_1829616_+\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237000	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed.	0
NZ_AP021846.1\|WP_152085884.1\|1827063_1828041_+\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|185502	PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydrogenase; Provisional.	0
NZ_AP021846.1\|WP_152085882.1\|1824525_1825560_+\|succinylglutamate-desuccinylase	gnl\|CDD\|235408	PRK05324, PRK05324, succinylglutamate desuccinylase; Provisional.	2.73946e-166
NZ_AP021846.1\|WP_152087544.1\|1833930_1835253_+\|amidohydrolase-family-protein	gnl\|CDD\|224149	COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism].	1.66728e-15
NZ_AP021846.1\|WP_152085824.1\|1835672_1836820_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.86104e-69
NZ_AP021846.1\|WP_152085892.1\|1839732_1842705_-\|hypothetical-protein	gnl\|CDD\|380078	pfam17963, Big_9, Bacterial Ig domain. This entry represents a wide variety of bacterial Ig domains.	0.00011275
NZ_AP021846.1\|WP_152087545.1\|1839041_1839647_+\|DUF998-domain-containing-protein	gnl\|CDD\|377627	pfam06197, DUF998, Protein of unknown function (DUF998). Family of conserved archaeal proteins.	6.16776e-17
NZ_AP021846.1\|WP_152085883.1\|1825846_1827064_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl\|CDD\|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	8.84783e-136
NZ_AP021846.1\|WP_152085880.1\|1822213_1822771_+\|replication-initiation-negative-regulator-SeqA	gnl\|CDD\|236874	PRK11187, PRK11187, replication initiation negative regulator SeqA.	2.7067e-83
NZ_AP021846.1\|WP_152085886.1\|1830489_1830876_+\|DUF4267-domain-containing-protein	gnl\|CDD\|372907	pfam14087, DUF4267, Domain of unknown function (DUF4267). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 126 and 142 amino acids in length.	3.31554e-10
NZ_AP021846.1\|WP_152085891.1\|1838415_1838895_+\|DUF1203-domain-containing-protein	gnl\|CDD\|377693	pfam06718, DUF1203, Protein of unknown function (DUF1203). This family consists of several hypothetical bacterial proteins of around 155 residues in length. Family members are present in Rhizobium, Agrobacterium and Streptomyces species.	2.98364e-28

>NZ_AP021846.1|WP_152085886.1|1830489_1830876_+|DUF4267-domain-containing-protein
MTRKIGFVLVLLMALLQGFYGLFAYIDPVAFADVRGTALISNEDIDWVQIYGSRTLFVSLIIGALLYFREFKVLMWAALLGTVMPLTDGYLAYQAEAPFGVVAKHIATIAYLIITSVVLFKVIANEKA
>NZ_AP021846.1|WP_152085885.1|1828050_1829616_+|2-oxo-acid-dehydrogenase-subunit-E2
MAKEFILPDIGEGIVECEIVEWLVAVGDEVKEDQPICDVMTDKALVQIPAVHDGVITTLHYEKGEIAKVHEPLFAMEVAGSAPANDSESSGEVPEQPSSQTASQLEDFILPDIGEGIVECEIVEWLVAEGDEIKEDQAVCDVMTDKALVQIPAKHDGLVEKLYYQKGDVAQVHSPLFQLRLAGLSDAPAEAKVEVKAAAQTVKAASQQVKKAQLPANGKAIASPAVRRLAREQDVDINQVPGTGKNGRVYKEDIKRFVEGGACAATADNMSASANSSASPVQTNVSGDTRVEPIRGMKAAMAKQMVASVSTIPHFTFSDEIDLTEIIALRKELKEQYAKEGIKLTMMPFFIKALSLAIKEFPIVNSQVNDECTEITYFDDHNIGMAVDSKLGLLVPNIKGCQSKSIVAVAQEVTRLTDAAREGRVAPDDLKGGTISISNIGAIGGTTATPIINKPEVAIVALGKLQHLPRFDDKGNVVSRAIMQVSWSGDHRVIDGGTIARFNNLWKAYLENPAKMMMAMS
>NZ_AP021846.1|WP_152085884.1|1827063_1828041_+|alpha-ketoacid-dehydrogenase-subunit-beta
MAKMNMLHAINSALDITMNEHPQACIFGEDVGYFGGVFRATSGLQEKYGKHRVFNTPLTEQGILGFANGLAAFGAPALAEIQFADYIFPAFDQIVNESAKFRYRSGNEFNVGNLTIRTPYGGGIAGGLYHSQSPEAYFAHTPGLKLVVPRNPYQAKGLLRACIKDDNPVIFFEPKRLYRASVGEVPEEDYTIEIGKAEVVKTGSDVTLLAWGAQMEIIEQAAAKAEEAGISCEVIDLRSILPWDVDTVAKSVVKTGRLIVSHEAPITNGFGAEIAATIQQECFLHLESPIARVCGLDTPYPLALEKEYVPDALKVFAAIKKSVEF
>NZ_AP021846.1|WP_152085883.1|1825846_1827064_+|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MTNPNNISLNISHALKFIDSHALDIPMLTILGDNGEVLDGAQAPDIDKETAQRLYETMRFIRLLDERMQAAQRQGRVSFYMQCLGEEAAITASAAALKQDDMIMAQYREQAAIAYRGFTLEQFMNQLFSNEKDLGKGRQMPVHYGSKELHYLTISSPLGTQIPQATGYAYGQKLKHIDKETGKLDSEIDNVTICYFGEGAASEGDFHAGLNMAAVHEAPVIFFARNNGYAISTPADEQFKGDGIASRGVGYGIKTIRVDGADALAVFAATQAARKIAVENGEPVLIESIAYRLGAHSTSDDPSGYRSKEEEAAFKANCPIERFRKWLLKQGWLDEKEDEAAKDKIREDILAAVKVAEKVQKPALEELVSDVYDTPIPALQKQYEELKEHIKQHPDAYPVTAGRIK
>NZ_AP021846.1|WP_152085882.1|1824525_1825560_+|succinylglutamate-desuccinylase
MYLEELKNTGDFLTLTRNNEFHLPPEQFTLANGTVVDVLDTGVIQFTPSNYGNKDIVLSSAVHGNETAPIEICDELIQAVIKEQLLLKHRVLFIFGNPKSINIGERFVEENLNRLFNGTHALGGVQNEERKRAANLERYVREFFTSVGAGRYRCHYDLHTAIRGSKNEKFAVYPFLHGKPWKKSQLQFLLACGVNTVLMMRSEATTFSYFSSKQFAADSFTVELGQVKPFGENDMSRFAKTKQTLTALISQNELEFGDFNSSDFELFQVHRTINRTQQDFSFPFPDSAENFTGFAKGELLAVDGETRYLAEVDGEAIIFPNANVALGQRALLTVIPMEVDERFV
>NZ_AP021846.1|WP_152085881.1|1822780_1824418_+|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MAIHPGAGKPVTQSQLVNIPKLVSAYYINEPDLEQHPEQCVEFGTSGHRGCSYNVKFNESHILAITQAICDYRKENDIFGPLFLGKDTHALSEAAFNSAIEVLVANEVQVITQENDDYTPTPVISHAIVCHNKANPNELADGIVITPSHNPPEDGGFKYNPPNGGPADTDVTKWIEDRANKLLLEDLVEVELFSFAKARRSGFIKYQDLVCPYVDDLANIIDMQAIAKAGVSIGIDPLGGSGINFWPVIAQKYNLNLSVVNDQIDPRFAFMPLDKDGKIRMDCSSPYAMANLIALKDDYDIGIGNDPDYDRHGIVTKDGLMNPNHFLAVAIDYLLNHRNWPSDVKIGKTLVSSAMIDKVVQANNHEVYEVPVGFKWFVKGLNKQWLAFGGEESAGASFLRLNGDVWNTDKDGFILGLLAAEILAVTGKTPSERYKELEAQFGAPMYKRIDAPATPEQKSRLKALSPEDVTAGELAGDQITQILTNAPGNNAAIGGLKVVTENGWFAARPSGTEDIYKIYLESFKGEAHLAQLEQEAKALVDSVIR
>NZ_AP021846.1|WP_152085880.1|1822213_1822771_+|replication-initiation-negative-regulator-SeqA
MKKIEIDDELYQYIASNTQSIGESASQILRRLLNLSTDSNNSLSVTADDSKHDGKQPEQTQDNIVADKETVEPNANVFNILNKEELAMQKGVVGRFLFILCALHRTHKKSFHKVLDIKGRDRIYFAKSKEALLESGSSMNPKNILDSEYWVMTNSNTTRKKMMLHEVALSLGYTEAQAETIRDYL
>NZ_AP021846.1|WP_152085879.1|1821320_1822085_-|alpha/beta-fold-hydrolase
MLLNYSQTGHGPNVVLIHGLFGSLDNLNVIAKALSEHFTVTNVDLRNHGHSFHDETMDYPTMANDIVSLMDHLDISHAHLVGHSMGGKVAMQVAMLTQQRVDKLVVLDIAPVTYHARHDAIISALNAVSNSTQLQSRSDADKLMAANIDEPGVRQFLLKSLAKNSENKFEWRFNLAVISANYDKIISNINETHSCLCDTLFIKGNDSDYVLPEHKEAIMKIFPNARAKVIHGAGHWLHAQKPQAVNRSIIDFLQ
>NZ_AP021846.1|WP_070985548.1|1821013_1821235_-|DUF2788-domain-containing-protein
MVSQFINEFETLGLYFALAGIFFFIGMAIQDVLKKGDVPKFGRYTVWLVLFLGCSGFIAKGLIQVFWQGAGVG
>NZ_AP021846.1|WP_010363446.1|1820732_1821011_-|LexA-regulated-protein
MAKSETDRTTIDLFENEKRPGRPKTNPLPREVQLKVNKRNQIKRDRARGLKRVEFKVSSELYQALSDMADEQNISRSALIETILQEKLANNR
>NZ_AP021846.1|WP_152085887.1|1831245_1831743_+|DUF2867-domain-containing-protein
MSIPKHSELFDYAKGAYFADSFSREIPNNNETALDVYLEIARQTPAWVSFLMSTRNRIVSMLGLKHLGRLQDAISAENIANINVGERIGIFTLQSNSDTEIVLEDSDKHLDVRVSFLLDVVGDKIKVHATTVVHVHNMFGKVYMFFVAPLHKLIVPSSLKTLAQA
>NZ_AP021846.1|WP_152085888.1|1832054_1832237_+|hypothetical-protein
MSENKINNNMGLAIAMGAGIGLVFGQFIFDNVGIGLSVGAGLGVVYGSINKFKQNKSDDN
>NZ_AP021846.1|WP_152085889.1|1832509_1833484_+|transposase
MGLARKRQISLSDTPYYHCVSRCVRRAFLCGEDKLTGKSYEHRRGWVEDRLLFLAQVFCIDVCAFAVMSNHTHVVLYVDDKKAQRLSDKAILLRWHKLFKGSKLALMYLKGEHLDEGQRFFLNKEIKEYRTRLSSISWFMRVLNENIARRANKEDKCTGHFWEGRFKSQALLDDAALMACMAYVDLNPIRAKMSKTPEESAHTSIKLRCEHAKAGKQPKQLARFVGSPRKHMPKGLPFELKSYLELVELTGKCIRTDKRGYIEQNEAPILQWLNIQAKNWIKLTTQFENVFHGAVGKAHNLDAYCARQQHKRRRSIKSSEALFV
>NZ_AP021846.1|WP_152087544.1|1833930_1835253_+|amidohydrolase-family-protein
MNVLISDGRITEITSKKITSYDLKINGLGKFLTPGLMDSHAHVSSIPGMGFGVEPVAIKNPKLTQAYFEQQPRSFLFHGVTQILDPNPGVSFNYFTSAPHHPDYFRCEVLTSKNTFPYVEKTDDLSRSMFTYLIDESAEATAENSVERLIGKIAQSGASCIKLYFEDGYGNANQWATLSTNTLKRIKLSAKKSNLLIIAHANALDMQQLALAAGVDVIAHGMWNWGQYNREQNIPKEISNTLDKMINDRVGYMPTQRVIAGLGEVMNPTIVNSLEFSSITPKSLIDWYKTTEVQWFKEELRIGFDGMPDQSISEAFLYGRIGKGNKVMQYLRSSNHPILLASDFPGSPSFANQPGLTTYQEMKAMVTAGLSLEEVLAAATINNAKQFRIDNDYGTVEVGKIANLLILKTNPLDSIESWNRIETIILHGDPIARESLVVNK
>NZ_AP021846.1|WP_152085824.1|1835672_1836820_+|IS3-family-transposase
MSKGKRYTQEFKIEAVKQITERGYSVTEVSERLGICTKTLYHWRSQLSDKPKSVKSSDEQLRIAKLEAELKRVTEERDIPKKGRKVLCQQPRVKYGFIRDHQDEFSITTMCRLFKLHRSGFYAWLKKPVSDRALEDSRLLKLIKEFYIASGGTYGSPWIHADLLEAGEQCSVNRVAKIMRQHNLKAQIGYKRRHIKSGKTSRIADNLLARQFNPPAPNQSWVSDITYVRTYEGFLYVATVMDLFSRRIVGWSMDKNMDKHLVINALLMAVYQRQPKTEILVHSDQGSQYGSADYLAFMKEHNLVPSMSRAGNCHDNAVAESFFATIKKRIIKRKIYSTREDAKAEIFNFIEMFYNPKKRHSHTGGVSPAKFEEAYYSELKTV
>NZ_AP021846.1|WP_152085890.1|1837158_1838286_+|serine-hydrolase
MSRFINQRISFLFIISFITVLASCKSFDATKFESNTQSQIIEFINGNAGQVVSISIVNAEDIYQYHFGKLSNGDTPNNQTIYEIGSITKTYTGLVVAKAMLDGKVELDKDIRHYLKDNEYKNLELEDKYITLRHLITHTSGLPGDFATSREDIVQGKYFEKISKYSRENYFDDLKKVRLNSIPGEEYQYSNSGTNLVAYILESIYEKPFQLLVSEIITNKTAEASTKFRETNYEPGEIVQGTDADGKQMPLASAYWFADGGLTSSIESITRYIQYQLSSEPEVAISHKLLDESWTGHGKAFYWNTYKHDSNEQMLYQGGGSMGTSCWLTIYPKKNIGVFIVTNVVRGNTQEELEAISDKVIDYLMAYNAAIKSDS
>NZ_AP021846.1|WP_152085891.1|1838415_1838895_+|DUF1203-domain-containing-protein
MKYKIIPVRADFLDKVRVLGIDDQNQQVEISYAVGGEPCRDVLRGAMPGEKIILASYCPFTKSGPYKEYGPIFVLENQGDESFDDTKLPLPTGVDTDYLGNIFVLKAYCENERILDSQLASPENAKAILNEYFSNDKVSFVLARYAAYGCYSFRVQRDV
>NZ_AP021846.1|WP_152087545.1|1839041_1839647_+|DUF998-domain-containing-protein
MFKDIAVYSGLIATVWMFVGVYIAGRFYTGYSHFKQFCSELGASGSPTEKLSPLINNYPLGFLFCVFGWYLVQLPNVSILVNISGWLVVVHGISTWVAGYFPMDEDPFTNNPTLSCKIHSLAGVIMLLSLIAAPILIAVSPTTETIPLYFRAFSVFSVVGAVYYLFHLAKAIKAQSNAGLYQRISYGFQLVWLSVFSLVLV
>NZ_AP021846.1|WP_152085892.1|1839732_1842705_-|hypothetical-protein
MIRFRYLATLFTALILNFTSLSRAQSAAPPLELLIPSVQIGDVEHFIHFDDQHIFVIDVWDGKYFFTTLVNKQNNYEISKRYYLADTVTTFNHYKDVKTGELVIALGMSSGKLKLFNVNKHEPIADLQISSHKIDSIKVSKYVSDGAGQLLISSGGKLGILDYLNNFEITLFNAGSGSILQGSFSQAQVKEVLFADGTIYTHPVDGVRKVTQLDTALFDGTPIYAFDEDSDEIDEIYTKRGTKGYPKLGLFSAKENKYLWDVANVSESALYHFRGFTLLPNRTKPTAIFSKFEYTIYENARYAHDLCLLTPSLTLSDATVNCYNQRFLFFRNAQKVVNVNDFNGDGKLDLFSAFSSSGNRIKMGFENLPYDETYWDVNGFPTPDLRCKGAEEIDLRRSSDKHALYCIGYKEWPQGTRYGTAQFWQNTDIKTGELLTSDAYLSTYSPSKFFEAFDDVSGDFKDDEFRFSGYYVNGADNKRTLSLGISVLSSESYTSGLGRADLEDKFDTFPNKAIYSAKDRAWYFQFPSNAVSFRLENEVNVLDKEKQFVGTSRAAFKGKEFVVGLANDGALYAINTVGEHTQLHSVCKAGEAVSLNEVSPTTLVFSCRGYFGLYNMISNTIEWQYSDPYHDHIVIYKKLEEQGYFYTLSNLPAVYMYNSPTIEPEVIEQQTLDVHIGSTLDIRLSDQFPGQHYVIEHHPYRGELRSVDLESGLYQYKPEKIGKEYISYQVVKDDLIVATGSFILESYNNAPEASNVEKQIHWRGESMVSLAGQDKDSETITYEIVSQPNVGKIVRLDPQTGLVMVSPSDTDDAAIVFDYRVLDSLTSSEPAVVTLNITNTTPVAHSKSVAVKPSEAIEFVLDANDKDGDPLTYVLTTDVVAGSLELDQNTGKVKFTAPAEKTEQLYFEYYVTDTRSQSTPQRVDINIESVDNGDNGDNGDDSTAKNPDNDKSQAPISNVEKNKNSSGSFAIISLLAIIISLRRRSSHTYK
>NZ_AP021846.1|WP_152085893.1|1842909_1843281_-|hypothetical-protein
MVELYLGLSLLVGLIIIFEANWLLRFPENQITPVTAITSIIEFVWAITTIFALIYGSFTKWQILVPSLYIIHNAIGWIYGLWLAGKLAQQQNRILSIPPWYAKFSLSFGIVFTVLCFIVSFIF

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Crispr_ID: NZ_AP021846_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_4

2061504-2061631

Orphan

Consensus_repeat	Method
ACCTTGACATGGTGGGGGTCGGTGGTTCGAATCCACTCGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_AP021846_4

>merge|NZ_AP021846|4|2061504-2061631|CRISPRCasFinder
ACCTTGACATGGTGGGGGTCGGTGGTTCGAATCCACTCGGTCGTACCAAAACAACTATACAACCGTAGCTCAGTTGGTTAGAGCACTACCTTGACATGGTAGGGGTCGGTGGTTCGAATCCACTCGGT

>NZ_AP021846|4|4|2061504-2061631|CRISPRCasFinder
ACCTTGACATGGTGGGGGTCGGTGGTTCGAATCCACTCGGT	CGTACCAAAACAACTATACAACCGTAGCTCAGTTGGTTAGAGCACT
ACCTTGACATGGTAGGGGTCGGTGGTTCGAATCCACTCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152086056.1\|2069524_2071708_-\|OsmC-domain/YcaO-domain-containing-protein	unknown	unknown	gnl\|CDD\|132588
NZ_AP021846.1\|WP_152086055.1\|2068757_2069465_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270422
NZ_AP021846.1\|WP_152086046.1\|2056173_2056869_-\|DUF445-domain-containing-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086048.1\|2057983_2058187_+\|CPXCG-motif-containing-cysteine-rich-protein	unknown	unknown	gnl\|CDD\|379524
NZ_AP021846.1\|WP_152086047.1\|2057043_2057898_+\|fructosamine-kinase-family-protein	unknown	unknown	gnl\|CDD\|367711
NZ_AP021846.1\|WP_152086052.1\|2062169_2064041_-\|M6-family-metalloprotease-domain-containing-protein	unknown	unknown	gnl\|CDD\|274507
NZ_AP021846.1\|WP_152086051.1\|2060363_2061377_+\|DUF3080-family-protein	unknown	unknown	gnl\|CDD\|378622
NZ_AP021846.1\|WP_152086049.1\|2058228_2058873_-\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846
NZ_AP021846.1\|WP_152086044.1\|2054682_2055477_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086058.1\|2072942_2074394_+\|exodeoxyribonuclease-I	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236979
NZ_AP021846.1\|WP_172971585.1\|2055747_2056107_+\|DUF3718-domain-containing-protein	unknown	unknown	gnl\|CDD\|378871
NZ_AP021846.1\|WP_172971587.1\|2071941_2072607_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270422
NZ_AP021846.1\|WP_152086059.1\|2074447_2075332_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|224995
NZ_AP021846.1\|WP_152086050.1\|2059036_2060389_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_AP021846.1\|WP_152086053.1\|2064288_2066565_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173803
NZ_AP021846.1\|WP_152087552.1\|2066887_2067781_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132847
NZ_AP021846.1\|WP_152086060.1\|2075471_2075987_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_AP021846.1\|WP_172971586.1\|2067820_2068564_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270422
NZ_AP021846.1\|WP_152086042.1\|2051916_2053161_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238634
NZ_AP021846.1\|WP_152086043.1\|2053173_2054556_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238634

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152086056.1\|2069524_2071708_-\|OsmC-domain/YcaO-domain-containing-protein	gnl\|CDD\|132588	TIGR03549, TIGR03549, YcaO domain protein. This family consists of remarkably well-conserved proteins from gamma and beta Proteobacteria, heavily skewed towards organisms of marine environments. Its gene neighborhood is not conserved. This family has an OsmC-like N-terminal domain. It shares a YcaO domain, frequently associated with ATP-dependent cyclodehydration for peptide modification. The function is unknown. Fifteen of the first sixteen members of this family are from selenouridine-positive genomes, but this correlation may not be meaningful.	0
NZ_AP021846.1\|WP_152086055.1\|2068757_2069465_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270422	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein. This subfamily includes the periplasmic sensor domain of the histidine kinase receptors (HisK) which are elements of the two-component signal transduction systems commonly found in bacteria and lower eukaryotes. Typically, the two-component system consists of a membrane-spanning histidine kinase sensor and a cytoplasmic response regulator. The two-component systems serve as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. Extracellular stimuli such as small molecule ligands and ions are detected by the N-terminal periplasmic sensing domain of the sensor kinase receptor, which regulate the catalytic activity of the cytoplasmic kinase domain and promote ATP-dependent autophosphorylation of a conserved histidine residue. The phosphate is then transferred to a conserved aspartate in the response regulator through a phospho-transfer mechanism, and the activity of the response regulator is in turn regulated. The sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space through their function as an initial high-affinity binding component. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.83539e-11
NZ_AP021846.1\|WP_152086048.1\|2057983_2058187_+\|CPXCG-motif-containing-cysteine-rich-protein	gnl\|CDD\|379524	pfam14255, Cys_rich_CPXG, Cysteine-rich CPXCG. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There are 5 conserved cysteines which occur in a CPXCG motif and a DCXXCCXP motif.	8.57031e-18
NZ_AP021846.1\|WP_152086047.1\|2057043_2057898_+\|fructosamine-kinase-family-protein	gnl\|CDD\|367711	pfam03881, Fructosamin_kin, Fructosamine kinase. This family includes eukaryotic fructosamine-3-kinase enzymes. The family also includes bacterial members that have not been characterized but probably have a similar or identical function.	4.10582e-87
NZ_AP021846.1\|WP_152086043.1\|2053173_2054556_-\|amidohydrolase-family-protein	gnl\|CDD\|238634	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.03977e-139
NZ_AP021846.1\|WP_152086051.1\|2060363_2061377_+\|DUF3080-family-protein	gnl\|CDD\|378622	pfam11279, DUF3080, Protein of unknown function (DUF3080). Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed. Currently this family has no known function.	6.76394e-51
NZ_AP021846.1\|WP_152086049.1\|2058228_2058873_-\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	5.94037e-93
NZ_AP021846.1\|WP_152086058.1\|2072942_2074394_+\|exodeoxyribonuclease-I	gnl\|CDD\|236979	PRK11779, sbcB, exonuclease I; Provisional.	0
NZ_AP021846.1\|WP_172971585.1\|2055747_2056107_+\|DUF3718-domain-containing-protein	gnl\|CDD\|378871	pfam12514, DUF3718, Protein of unknown function (DUF3718). This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.	1.56992e-07
NZ_AP021846.1\|WP_172971587.1\|2071941_2072607_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270422	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein. This subfamily includes the periplasmic sensor domain of the histidine kinase receptors (HisK) which are elements of the two-component signal transduction systems commonly found in bacteria and lower eukaryotes. Typically, the two-component system consists of a membrane-spanning histidine kinase sensor and a cytoplasmic response regulator. The two-component systems serve as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. Extracellular stimuli such as small molecule ligands and ions are detected by the N-terminal periplasmic sensing domain of the sensor kinase receptor, which regulate the catalytic activity of the cytoplasmic kinase domain and promote ATP-dependent autophosphorylation of a conserved histidine residue. The phosphate is then transferred to a conserved aspartate in the response regulator through a phospho-transfer mechanism, and the activity of the response regulator is in turn regulated. The sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space through their function as an initial high-affinity binding component. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	8.89042e-12
NZ_AP021846.1\|WP_152086059.1\|2074447_2075332_-\|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	2.18427e-117
NZ_AP021846.1\|WP_152086050.1\|2059036_2060389_+\|MATE-family-efflux-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	2.81864e-145
NZ_AP021846.1\|WP_152086053.1\|2064288_2066565_-\|S8-family-serine-peptidase	gnl\|CDD\|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.09572e-67
NZ_AP021846.1\|WP_152087552.1\|2066887_2067781_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132847	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	5.37994e-74
NZ_AP021846.1\|WP_152086060.1\|2075471_2075987_+\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	1.40182e-69
NZ_AP021846.1\|WP_172971586.1\|2067820_2068564_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270422	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein. This subfamily includes the periplasmic sensor domain of the histidine kinase receptors (HisK) which are elements of the two-component signal transduction systems commonly found in bacteria and lower eukaryotes. Typically, the two-component system consists of a membrane-spanning histidine kinase sensor and a cytoplasmic response regulator. The two-component systems serve as a stimulus-response coupling mechanism to enable microorganisms to sense and respond to changes in environmental conditions. Extracellular stimuli such as small molecule ligands and ions are detected by the N-terminal periplasmic sensing domain of the sensor kinase receptor, which regulate the catalytic activity of the cytoplasmic kinase domain and promote ATP-dependent autophosphorylation of a conserved histidine residue. The phosphate is then transferred to a conserved aspartate in the response regulator through a phospho-transfer mechanism, and the activity of the response regulator is in turn regulated. The sensor domain belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space through their function as an initial high-affinity binding component. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.76452e-10
NZ_AP021846.1\|WP_152086042.1\|2051916_2053161_-\|amidohydrolase-family-protein	gnl\|CDD\|238634	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	6.24011e-45
NZ_AP021846.1\|WP_152086052.1\|2062169_2064041_-\|M6-family-metalloprotease-domain-containing-protein	gnl\|CDD\|274507	TIGR03296, hypothetical_protein, M6 family metalloprotease domain. This model describes a metalloproteinase domain, with a characteristic HExxH motif. Examples of this domain are found in proteins in the family of immune inhibitor A, which cleaves antibacterial peptides, and in other, only distantly related proteases. This model is built to be broader and more inclusive than pfam05547.	3.19784e-44

>NZ_AP021846.1|WP_152086051.1|2060363_2061377_+|DUF3080-family-protein
MRLFCQIISWITILAGCSPAPSGVHVEYQQRLANVIQLDHVDTITLRPLKSRHANKPSSQITLSMLELAHLSHCSLMSTIANNNNQLGKVRVPSEQLKYAIMFINDAQTCLDHSATTDEIVITKLTLALAEKKNQLSAYFEQMVFNERELAKMLLLTSQEINLEDHQEAISQALEALTTLAAIYKEIVQNNSDTTQLRDPQRITGALAKLNQNYAVSRLITSARKQIKLNQVTTQWLNNITPTKHLCQPNKSKQKAQIMSNIFNKFYLSQLQGYQSKLTKMLRDVSPHLATLWRSEPDLSQKFNIEHSDSYYQQLKKSAVDHVSWWQYFYKTCKIQP
>NZ_AP021846.1|WP_152086050.1|2059036_2060389_+|MATE-family-efflux-transporter
MKFSHWESKRLLQLATPVFFAQITLVLMSVVDTMMAGQVSANDLAALSIATGIWNPLLFSLQGILLAITGIVAHCHGAKDISSIKSHFQQGIYLALILTVLSLILAKFTPHVFSKLGTSTDITDLSQQYIDFVKWGVLGFLLFSIYRNVTEGVGLTKPAFYISLIGLAVNVIANYIFIYGKLGMPAYGSAGCGLATALVFWAMAVAQWLYCKRSTIMRNLSLLSPFSKPDLSAIGYIAKLGLPICLATFFEVTLFACIPLFIADLGAIAVSGHQIAASVTTVLFMMPLSLSMAIAIRIGNLSGQQAYQQLKAAVFTSFCLAAFIAFFVAMLTFLARDSIVWLYTNNEQVAVLASSIIVLACVYQLPDALQVAANGVLRGLKYTKPISYITFISYWLIGFSLGYVLAKTDLLVPAMGPEGFWLGIIMGLSAAAILLLLSVRSRLATILSNY
>NZ_AP021846.1|WP_152086049.1|2058228_2058873_-|riboflavin-synthase-subunit-alpha
MFTGIVQTQATVISTNHKEGVLRLGISVGVEYLSHLDIGASIAINGCCLTVVEYELNRQDVVGQVYFDVIDETLQLTNLNAICKGDQVNYERSVTFGTELGGHIVSGHIHCAAQVLQIVNDASNCKIYLHLPSHWLKFVLYKGFICVNGASLTVGEIDEQGFWLHLIPETLNITNIGRLQEGDWVNIEVDQQTYTIVNTVENYMRKQSRLNDLN
>NZ_AP021846.1|WP_152086048.1|2057983_2058187_+|CPXCG-motif-containing-cysteine-rich-protein
MKALYDQRITCPHCGHHVYISLDASEGDQDFYEDCAACCNPIHCNMHIDQSNNKLELHIDSDDEQVF
>NZ_AP021846.1|WP_152086047.1|2057043_2057898_+|fructosamine-kinase-family-protein
MWNVVNQQISEALHQPFILTHKEQLSSVENEMRFHISNGELNYLVKVDLLSALERYESESKARDLLIRDSDFLIADTITIGTTLEFSFIVLEVISKAETSPNWQECGLQLAKMHNRYEQKMFGLEEDGYLLHMAQPNQWHKKWETFFAEERIGWQLQLLKEKGVELVNIDDFVVTVKSLLAHHAKPSLLHGNLCQGNVFFNESKPCLDNPACYYGDREVDIAMSELYTPLPQAFYDSYNEHLPLSPGYEMRKAIYQLYPLLLHANFYAGEHINHAQKRVNEILK
>NZ_AP021846.1|WP_152086046.1|2056173_2056869_-|DUF445-domain-containing-protein
MNKSYITNTLALITVLVGYFAALPMVFSIGIFALSGAITNLLAIHMLFEKVPFLYGSGVIKLKFKQFKESISMMILQEFFSQEKVAALLEKQQDSIDLSPVIKKVDLSPAFEKLLQVIETSQFGPMLAMFGGNEALQPMKASFIEKMQDALIDITEEEKFKQLMDQELRSGHSAEMVFATIENAVEQRLEELTPDMVKEIIQNMIRTHLGWLVVWGGVFGGFFGFIAHIAG
>NZ_AP021846.1|WP_172971585.1|2055747_2056107_+|DUF3718-domain-containing-protein
MKKLTTLCSSAALLAGLLVGTANAEQFVAADNSIETELCMAITEDDSFKLRKTMKEHRIGLRLVQNELTCNNMSADKFVAKHGLRNSANSLNLDLNTQTHIKDLSAQNDMNKKTIVSGS
>NZ_AP021846.1|WP_152086044.1|2054682_2055477_-|hypothetical-protein
MKTYKASLKKYYKHGMAKHLESAKQCYYCGCEATDTDFCPPLEHAELVLEFDEQADFITVPACYECYALLHNERVLSLALRVKKLKTKLSAKYAKALKVYYMWHESELDEMSPEFAHSISAGMRLGQEAAQRVEFQPFLLESDNPEIDRPSVNQTFVVANREFTSFDTALTHCIESYGLNKSKFYDLLVKDCEGDFDKALSQYEHRYSKPQTLDVAKAKIQSFSKRYKQNSDFVARATEQLMKRDAKLDIDEALAKLYQDYIAR
>NZ_AP021846.1|WP_152086043.1|2053173_2054556_-|amidohydrolase-family-protein
MQKFAPSILVLALSAALAGCQDTGPQKEKVTIEKNPYPSTYQALPATTTLITNATVLTGTGERLDNADVYLVDGKISQVGVDLNVEAQTTVDAQGKWVTPGIIDVHSHLGAYPSPSVESHADGNEMINPNTSQVWVEHSVWPQDPGFNRAREGGITTLQILPGSANLFGGRSVTLKNVPAHTMQAMKFPEAPYGLKMACGENPKRVYGSKGVAPYTRMGNMAGYREAWIEATEYKRAWERYEQEYAAGMNPDAPKRDIKLDTLRGVLDGEILIHNHCYKAEEMAMMIDLGKEFNYHSGTFHHGIEAYKVADLLADNGNCAALWPDWWGFKMEAYDMVQENVAIVDAVKNSCAVIHSDSDTTIQRLNQEAAKVMFNANRNGFDISEEHAIKWITHNAAKSLGIADKTGSIESGKQADVVIWNQSPFSVYAKAEHVYIDGAKVYDRNDEKYQAVSDFMLGQK
>NZ_AP021846.1|WP_152086042.1|2051916_2053161_-|amidohydrolase-family-protein
MTKFKLSMITGALLTSSAAFAQITAITGATVHTATEQGTLNNATVVIENGKIKSINPQNIEADVTVSAEGMVLTPGFIGTMNQLGLVEVGAVARSRDASDDKAGLDFDPSYAFNPRSSLIAYARKGGITQNVVSPINYDAAYSGLAFTADLSGEFDSVTDKHTALVIDLGAKSKGSRALSFQQLVEKLEGQQAKLEKQKDKKEDKKDEGKPSGEERVLTQLLEAKMPLVVEINRAADIAQVIKLKEKFALDVIIRGGSDAVLLADELAKAEIPVIISGVSNLPSDFDALHANLENAGKLEKAGVKVLLSVFGDGSHNLYQLRYDAGIAVSNGMSFNSAIKAVTSNVADAFDLDGGKIAVGHRADLVLWSADPFEISTHAEKVWINGEEVTTESRHDTLRERYMTESNLPRAYTK
>NZ_AP021846.1|WP_152086052.1|2062169_2064041_-|M6-family-metalloprotease-domain-containing-protein
MYRFNKLALAPLVIFSSLSQAAIPYKDHNYEYTQPNGEVVSISLEGNDYFAFQRSQDGRLVVFDENKNGLAYAEVSSDGQNLISTGVLVSNKVALGKTTKAAALTLSQSAIEKKVEQAKQRMFGDKPLQANGMLSTLSDVDTQSTGQIKGLTIIIDFPDFPGTISQSQVESFLNDLNYTEFGNAQSVRGYFNSVSGGKLDYTNTVTAYYTAKRNKSYYTDDRYSSTVRSQELIKEALNWLEYTQGFDFSSLSVNANRQIKGLNIFYAGNSDSSWSKGLWPHMAALSPRFCADGVCTDRYQITDMRDKLAIGTFVHESGHLITNWPDLYDYDGSSEGSVASFGVMGYGAIGETNRFKPTPPVAHFRNLAGWDTVTELNPAINSNAPSGILTHTSGSNTSYKWTNPSNQNEAFYIEAIHRSGQNSEQEDEGLAIWHVDRAGNNSNEWYPYIQMEHADGNRDPENNINRGDASDLYDVAGEFSSALPNAQSSKGTNSLWWNGSRSGLSISQVSDPAQTMSFKVVGDDSDDGEIYTGYLANKEQAIVPNGTWFQYSGGTLDMTLQGPNEADFDLKLEVWQGGRWTQAAISETPTSNEAITYQASSGYYRITVYSYSGSGNYTLTLKR
>NZ_AP021846.1|WP_152086053.1|2064288_2066565_-|S8-family-serine-peptidase
MKKVTTNKAIFATTLLSLAVSASLQASTLKQVADKSESPLPKRYIVKYKNNEMAMMGVAMQDSNSMPQMAANRMATLGVQNAQFKASLNAVVAQLSETQLMALRNDTQVEYVEEDLPRRLMSQSQPYGISMVQADLVDDSVASAASGGKKICVIDSGLDLPHEDMGARGDTISGTNDSGTGNWYEHGGPHGTHVAGTIAALNNGIGVRGVIGTDPSMHIIKVFNAAGWGYSSELVDAINKCQAAGSDVVNMSLGGEGSSITERNGIQAAADAGMLLIAAAGNDGVPTNTTDIESYPASYDSVMSVAAIDSNKALADFSQKNSQVEIAAPGVDVNSAYPEGLGTIVSLSVAGQSYDSNGMENQGNANAPLYNFATGESIDTGASGKVCLIQRGNISFHDKVKNCEDSGGLGAIIYNNAAGSFGGTLGDTNQTTIPAVTVSDSDGATMLNNIGMTASVNLDPSNYGLMSGTSMASPHVAGVAALVWSHHPSCTASQIRAVLTATAQDLGATGRDVKFGYGLVQTKDAIDFITEKGCDGTGGPVQPPVGNELVNGVAKTNLSGAKAEELLFTFEVPAGATDVKVSMSGGTGDADLYAQFGSKPSDSNFECRPYAGGNNESCNLTKSGGTYQVMVKGYSAFSGVSLVASYTDGGTTNPGAQPIDITETGISVSRRGWTRFTLDLVDGYSDLNVSTSGGSGDADLFVTRGAQSTTSSYDCKSESSSNNESCSMQNPQAGKWYIDIYGYRASSGITLNVTATPK
>NZ_AP021846.1|WP_152087552.1|2066887_2067781_-|patatin-like-phospholipase-family-protein
MTESVRAHEPQFALVAEGGGQKGIFTAGVLDAFLEANFWPFDLKVGVSAGAQNLAAYSARAKQCAHTAIAQLTTDETFFKPSKFFTDGKVIDLDWYFSQVRHSPKLQVLTDPNNLDKDNHFYAVATDAQTLQPKYLHTWHENMLEHLKASSAIPFLYQGGVNIAGRNYMDGGVADPIPVKWAYEQGAKKILVIRTFEQHHNGHMPLLERLKPLMSRLKQSQKMLDLYHYHQSRYNEALEFMNNPPSDVNVIQIAPTQPLQSMVLGSSNQMLQYDYLLGLRHGKNFLRRCRKELAIQS
>NZ_AP021846.1|WP_172971586.1|2067820_2068564_-|transporter-substrate-binding-domain-containing-protein
MIQSKPSIGAVDIYTEHFPPYQYRDVDGVVVGHATAMVRALMAKAKLDYKIYLLPWHRAKQQFEGSQGALIYSIARTVEREGLYHWLMPLCDLNVGFYKRVENTQNIASYSLDNLKQYVVGVGVAQPSLEFLRAQGFEDDKLVTLSSLNQAGGLLEKGRIDYLFGAQSFVEQMSRAMGTQNKWELVLDVPELSAKLYLAAHKNTPKNMLHKLTSAKEKLGEAKQNDKKACHTGRYIQKSLSTITDLQ
>NZ_AP021846.1|WP_152086055.1|2068757_2069465_+|transporter-substrate-binding-domain-containing-protein
MIVRAVFILLNVFYASISIAHSSDAHLRVVTEHFPPYQIVKNNEVTGGTAYNVVKAVLEKAGLHAHMEVLPWARAYEIALKRPNVIIFSIAKTPERAPLFHWLYKLGKLEFRFYSSNKNKQIRIDNMLDAKKYILAAVRGSYEADKLLSLGFRLDTNLILVNDFSHAWRMVDKGRAEAIYASHIPPKVKHSSLHGYNQHPTVYEHRFLYVAASLSTSQTTLMTLKNTFEQLKKSQ
>NZ_AP021846.1|WP_152086056.1|2069524_2071708_-|OsmC-domain/YcaO-domain-containing-protein
MEIKVNFLDNLRLEAKFDDFSVIADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCNAREIPTEGIRLSQNNIVDPENRYNQIFQIQVELPERISEKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDEDAQAMLMTTPDGASTTFIEGKDLPLEQTIADMTSILAELGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFLGHEIANSDFVHYPNEKWFKLEEDDSLPEGILDGYCREIYDPEGELRGSHLIDTNSGNAQRGICSIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNFNEAKVQCLSEIFERAVKRQIIEQEIVLPDVPAEILNKYPSIVAGIKGLEDQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRFFSAKHDYEFVEWDFSGTNEEECDTLFNILKDLGKECYVAEFSDLGIACRILVPDYSEVYPVEDLIWDNTNKALQYREDILNLHRLDDDQLARLVERLEESQLDNYIDIITLIGVEFDENTVWGQLTILELKILIYLALGELEEAIDLVESFLQYNDNTVERGLFYQAVHAVLEVELDEELQLDDFIASFERMFGGEVMENVVGSVMGETRFYGLTETNMNLDGLDKHLRLIDSYKKLHKARSSKAGL
>NZ_AP021846.1|WP_172971587.1|2071941_2072607_-|transporter-substrate-binding-domain-containing-protein
MPLSLLAERTRLHIYTEHFAPYTIVEPDGTLAGSAVTTVKNALELAGFEPIIEIVPWARAYEMTLTQPNTILFSMAKTPERAPLFHWLFKLTTLNYDFYTLDKPSLQLTSMEQALLYTTVAIRGSYEESKLTNLGFEVGKNLVLVADMASAWQMLDKGRVDTIFASHIPTQKTDKARAHLYKRQSAINDTHELFVVASLKTSKNVIISLKNAFNLQGTNSE
>NZ_AP021846.1|WP_152086058.1|2072942_2074394_+|exodeoxyribonuclease-I
MATQEQGLTGPTIYWHDYETFGASPQKDRPSQFAGIRTDLDLNIIGEPLIEYCKPAPDYLPQPEACLITGITPQHALKHGLNEAEFMAKIHAEFSRPDTCVAGYNSIRFDDEVTRYSLYRNFYDPYEREWQNGNSRWDIIDLVRACYALRPEGIEWPLKDDGTPSFKLEHLTVANGIEHSAAHDALSDVTATIALAKLIKEKQPKLYQFFFGLRNKKALLDMVDVYNMQPLVHSSSRIPASQGCTTWVAPMSFHPVNKNALVCFNLTHSPQVLLDLSVEQLRERLYTKHTDLAEGEQPLGLKLVHVNKCPILAPAKTLLPENAARLGIDRAQCLEHLKVLKAHPELRDKVAQVFNEQGDFSATTNPDYQLYNGFTSKADKAKFAIIRQAQPQALGTLNLEFEDAKFSTMLFRYRARNWPETLSPHELDVWRKYCQNKLMHGEDNPSISAEDFMLTLENLVHENEGNEKNLSILKALYHYAQSL
>NZ_AP021846.1|WP_152086059.1|2074447_2075332_-|prephenate-dehydrogenase/arogenate-dehydrogenase-family-protein
MSMKVAFIGLGVMGYPMAGHLARAGHQVCVYNRTVEKAQKWASEHQSGYANTPVEAAKDADIVFMCVGNDDDLRSVVYGETGVLAGMQEGAILVDHTTTSAKVAIEVANHAAKKNIAFLDAPVSGGQAGAENGVLTVMVGGEQSDFERVKDIMAAYSKFSQLLGKVGSGQTCKMVNQICIAGVVQGLAEGLHFAKQAGLDGEKVIETISKGAAGSWQMENRYKTMLAGEYEFGFAVDWMRKDLGIALDEARNNGASIPLTAMVDQYYADVQALGGGRFDTSSLLARLDAIHDKK
>NZ_AP021846.1|WP_152086060.1|2075471_2075987_+|glutathione-peroxidase
METIHRYSVKLINGETLALKQLEGKTVLIVNIASKCSFAPQLSALEKLYRQYQSYGFEILAFPCNQFGRNEPLEGAMLNEFYKSHFGLSFIVCDKVHVNGPEAHPLFNYLKSNTRGIAQNRAIKWNFTKFLVNSQGELVSRYAPRTKPDTLKPVIESQLNDESSPIQFAKL

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Crispr_ID: NZ_AP021846_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_5

2623121-2623258

Orphan

Consensus_repeat	Method
TCGGGTGGCGCTTCGCTTAACCGACCTACACAACCCGTAGGTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021846_5

>merge|NZ_AP021846|5|2623121-2623258|CRISPRCasFinder
TCGGGTGGCGCTTCGCTTAACCGACCTACACAACCCGTAGGTTAAATAAGCCAAAGGCGCCATCTAACAAAAATACAAGACAGAGTCACAAACGTCGGGTGGCGCTTCGCTTAACCGACCTACATAACCCGTAGGTTA

>NZ_AP021846|5|5|2623121-2623258|CRISPRCasFinder
TCGGGTGGCGCTTCGCTTAACCGACCTACACAACCCGTAGGTTA	AATAAGCCAAAGGCGCCATCTAACAAAAATACAAGACAGAGTCACAAACG
TCGGGTGGCGCTTCGCTTAACCGACCTACATAACCCGTAGGTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152086501.1\|2623455_2624013_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086495.1\|2615522_2616329_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP021846.1\|WP_152086491.1\|2611638_2612139_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_AP021846.1\|WP_152086498.1\|2618760_2619567_+\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|226621
NZ_AP021846.1\|WP_172971602.1\|2629309_2631715_+\|DUF2309-domain-containing-protein	unknown	unknown	gnl\|CDD\|378378
NZ_AP021846.1\|WP_152086493.1\|2613207_2614197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086500.1\|2621089_2622964_+\|collagen-like-protein	unknown	unknown	gnl\|CDD\|189968
NZ_AP021846.1\|WP_152086505.1\|2626775_2627663_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_AP021846.1\|WP_152086510.1\|2633493_2636439_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_AP021846.1\|WP_152086499.1\|2619628_2620885_+\|DUF21-domain-containing-protein	unknown	unknown	gnl\|CDD\|236933
NZ_AP021846.1\|WP_152086497.1\|2617214_2618594_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_AP021846.1\|WP_172971601.1\|2627760_2629293_+\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|236171
NZ_AP021846.1\|WP_152086496.1\|2616615_2616978_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086492.1\|2612694_2612934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086504.1\|2625988_2626684_+\|MFS-transporter	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086509.1\|2632676_2633096_-\|DUF4177-domain-containing-protein	unknown	unknown	gnl\|CDD\|379366
NZ_AP021846.1\|WP_152086503.1\|2625103_2625670_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086502.1\|2624273_2624837_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086508.1\|2631775_2632609_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086494.1\|2614350_2615097_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153235

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_172971602.1\|2629309_2631715_+\|DUF2309-domain-containing-protein	gnl\|CDD\|378378	pfam10070, DUF2309, Uncharacterized protein conserved in bacteria (DUF2309). Members of this family of hypothetical bacterial proteins have no known function.	0
NZ_AP021846.1\|WP_152086495.1\|2615522_2616329_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.54092e-16
NZ_AP021846.1\|WP_152086491.1\|2611638_2612139_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.24233e-27
NZ_AP021846.1\|WP_152086498.1\|2618760_2619567_+\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|226621	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.89165e-60
NZ_AP021846.1\|WP_152086500.1\|2621089_2622964_+\|collagen-like-protein	gnl\|CDD\|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	2.1951e-07
NZ_AP021846.1\|WP_152086505.1\|2626775_2627663_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.33688e-30
NZ_AP021846.1\|WP_152086510.1\|2633493_2636439_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	7.15142e-24
NZ_AP021846.1\|WP_152086499.1\|2619628_2620885_+\|DUF21-domain-containing-protein	gnl\|CDD\|236933	PRK11573, PRK11573, hypothetical protein; Provisional.	0
NZ_AP021846.1\|WP_152086497.1\|2617214_2618594_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_AP021846.1\|WP_172971601.1\|2627760_2629293_+\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|236171	PRK08168, PRK08168, NADH-quinone oxidoreductase subunit L.	6.23077e-124
NZ_AP021846.1\|WP_152086509.1\|2632676_2633096_-\|DUF4177-domain-containing-protein	gnl\|CDD\|379366	pfam13783, DUF4177, Domain of unknown function (DUF4177).	1.9199e-06
NZ_AP021846.1\|WP_152086494.1\|2614350_2615097_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153235	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein. Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein (EcHsp31). This group includes EcHsp31 and Saccharomyces cerevisiae Ydr533c protein. EcHsp31 has chaperone activity. Ydr533c is upregulated in response to various stress conditions along with the heat shock family. EcHsp31 coordinates a metal ion using a 2-His-1-carboxylate motif present in various ions that use iron as a cofactor such as Carboxypeptidase A. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with a typical GATase1 domain, a reactive Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For EcHsp31, this Cys together with a different His and, an Asp (rather than a Glu) residue form a different catalytic triad from the typical GATase1 domain. For Ydr533c a catalytic triad forms from the conserved Cys together with a different His and Glu from that of the typical GATase1domain. Ydr533c protein and EcHsp31 are homodimers.	1.88737e-60

>NZ_AP021846.1|WP_152086500.1|2621089_2622964_+|collagen-like-protein
MLQHSLKRSLQHSLIALSITSVLAGCSLDGDDGKNGAQGPQGVAGEQGPTGTNGQDGQNGTNGQNGIDGQNGKDANRLLDIQLVGRAVLNAQSPEGAAEIVAYQASKKWIYAINSSGEQAVVDVIPATSFDSTALARNNENVTTSTNLTSALTLKLNDHTAGDANSIAIDSNNQLLAVAMAAKVTGQAGQIAFYDISGNTPTFIKNVQVGALPDMVTFSHDGAKVVVANEGEPAGDYSVDPEGTISVISITNGTIADTATHIDFNAFNDKQAELEAQGMVFANPTGRTINGKLINTTVAMDLEPEYVSISKDNRFAYVSIQENNAIAVVDLSDNSVKLMGLGFKDWSELSMDASDKDGKINFRNYPGLYGMYQPDTIANFTWKGANFIVSANEGDGREYFFDAKDEADCTAKGGLDYDKDDGCLAYIDESRAKKLTLADNFAYLNNDNDDIGRLKVTTVKGDNNNDGQYEQLYTYGARSFTIWDSNGMVVFDSGDQIERITASIHGSAFNNDEDENEGDTRSDAKGPEPEALALGKIGERLFAFVGLERMGGVMVYDITNPYDVKFADYFYNRGTVEGADISGDLAPEGMAFVPAEQSATGKPLLIVGNEISGSVAVWQIALKD
>NZ_AP021846.1|WP_152086499.1|2619628_2620885_+|DUF21-domain-containing-protein
MDDISTSTLFIILGLLIMISGYFSSSETGIMSINRIRLRHLEKENHRAAKRVSKLLRRPDRLIGLILIGNNLVNIAAAQVATIIGLRLYGDMGIAIATFVLTLVVLIFAEVTPKTLAALYPEKVAFPSSIILKGLLKVLFPLVITVNWITNGMLKLFGISSKQIAEHSLSKEELKTVVNESSALLPSNHQNMLTSILDLEQVTVEDIMIPRNEINAIDINDDWKDISRQLTHAQHTRVLLYRDQIDDAVGFIHSRDALRLLTKEQFDKPSLLRAVREIYYIPEGTSLNTQLLKFQQSKERIGLVVDEYGDIQGLVTLEDILEEVVGDFTTTQTPAASDEVNIQSDGSVLVDGAANIRDINKEMNWELPTEGPKTLSGLIVEHLEDIPDAPLSLVIAAYQMEVVELKENMVKLVKVTKR
>NZ_AP021846.1|WP_152086498.1|2618760_2619567_+|cytochrome-c-biogenesis-protein-CcsA
MLIVSLSLFASLFYVLATGHVLSRLFHKEGPNQKLTIILSTLAILGHMLLLVNSVFTHDGQDLSTVNVAMLTCWVIVVSVTTVSLKFPATLLLPVVYGFAAILLISSLFIPHHIVMHTINVDLGLVVHISLSLLAYCVLIIATLYAVQFFYIDNRLKHKDLAIMHSHLPPLMQVERQLYQLLTIGTALLTLALLSGFVFLDGMFAKEFIHKTVLSLVAWTIFAAVTLGHHKFGWRGKAVVVSIMTASGLITLAYFGSRFIQEVILGKF
>NZ_AP021846.1|WP_152086497.1|2617214_2618594_-|signal-recognition-particle-protein
MFENLQERLGKTLKNISGRGRLTEDNIKETLREVRMALLEADVALPVVREFVKQVKERAVGVEVTKSLSPGQVFIKIVREELEKAMGESNEELNLAAQPPAVVMMAGLQGAGKTTSIGKLAKFLKERKKKSVLVVSADVYRPAAIKQLETLASEVDVEFFPSDISQKPVDIATNAISHAKKKFIDVVLVDTAGRLHVDSDMMDEIKALHGAINPIETLFVVDSMTGQDAANTAKAFDEALPLTGVILTKTDGDARGGAALSIRHITGKPIKFIGVGERTDALEPFHPDRIASRILGMGDVLSLIEEVEMKVDKDKAAKVAEKVFKGDGFTLEDFAEQLRQMKNMGGMMSMLEKLPGMNNLPDAVKGQVGDKTFNQMEAIISSMTPKERARPEIIKGSRKKRIAAGSGTQVQDINKLLKQFTQMQKMMKKMKGKGGMQKMMRGMKGMLPPGMMGGGGPKF
>NZ_AP021846.1|WP_152086496.1|2616615_2616978_-|hypothetical-protein
MNHLFSLAFIGLYGAAIIQLSFLVFSDVLDDGVLTYVAVGLGLLAAPVLRLYQKWRHDKSANIIIEYKPDSTPFHHKILNFPAIAVLTTIGSMGFIAVTNHKFSSNEVTHKEFRVTGVGQ
>NZ_AP021846.1|WP_152086495.1|2615522_2616329_-|alpha/beta-fold-hydrolase
MKLILLLLLFLFSFNASSEVSFIKVKGYDVEYEIKGSGEHIVFLEAGGSAGLSDWDLIFEKLAKKTKVIRYSRIGNGGSEKIKKNYTSEEYAQEASLLLTALKIDQPVVYVAHSYGAYIARRFSSTYPDKVLALMLIEPASEHDVDIMRKIDLELAEKQIAQVKLDDLANGMSNQYLDFWSKRPLPDYPEIPNIPVTVIASTKKFEEPQLLFFTDQARDMWGKLNSNWATAFPQGKVVLTNKSYHFPQNDEPDMVVAEIVELLSRIKH
>NZ_AP021846.1|WP_152086494.1|2614350_2615097_-|DJ-1/PfpI-family-protein
MKLLITILLTAAFFATNAIAEPNKKVLIVASNMVDMGDPEKHDARNNLWEFAPPYHIFVSHGFDVDFVSPKGGEVRFMMDPLGISSYTIKYEGFLDKANSSFSPSQIDPNDYWGVFIGGGYGVMFDVADNKKIHSIISSVYESGGIIGVGGHGSAGIANVTLSNGEFLVKGKKIAGFPNSTETSKSWAKQGTLLPFLIESQLNKNGAIAQNKKTLKDKHAVVADQRIVSTMFLPSAALVAKEMIILKP
>NZ_AP021846.1|WP_152086493.1|2613207_2614197_+|hypothetical-protein
MIKRIFTFILLSLSISSSAFYSTNRILYLNLTSSEETISIEAKLDGKTKKFRLDEDSNITKRNFKSILEKLNEWELSKKYFENNLAHYEKTIFNPISTMLDESNQVHFILDEGSFAFALDLIPYKGKPLFLQRPTSFSSKPIRVVKNYKFNPDGLGLTIKDKTTDPESASLILSKIMPNTVNYNMESISKDQLAQLSNLDMALISLHGIASDGVAFMQLNDEEVYSYDLAQLNSRLLYLDSCQIGSSFNFAEQVSKSANQFIIAPLFDNEAGDSSTLTIQSFFTQLNNGSTPANAMYHTRKSLFEGYNNTYGFKTAIWKAYPFRVIQSN
>NZ_AP021846.1|WP_152086492.1|2612694_2612934_+|hypothetical-protein
MSYIPKWLLLPLLVSTEFPNSFSMAMNQLEKYVAIYQLDDTHEIKTYLRNDKLFSRQLGSFIFELTPKSETEFDFHTWI
>NZ_AP021846.1|WP_152086491.1|2611638_2612139_-|sigma-70-family-RNA-polymerase-sigma-factor
MGSDFYQQSIMPYAGIIIKICRAYTNSQADFDDYYQEVCLQIWRSRDSFNAASKWSTWVYKVALNVCLTNLKQRKKGEQRFVSDALPDEVNDDVKAFSSEDINMLYNAIKHLSEIDRAVILLYLEEKSYGEIAEIIGANKNSIGVRITRIKGRLNKFIQAQELTHE
>NZ_AP021846.1|WP_152086501.1|2623455_2624013_-|hypothetical-protein
MSEFLNQLTVSISVYIGMLILWFLVTQFPVYRWRLFFARKGQITSLQQHEMYSCFITVVCFFLIWVVVDSLEFYLLTLDFGLNSKIKTFYLVLMAINTINVVIVFLIHKLSECIFSGSTRACLYMLLVSISVSFMQLIARGYYDYHELKVLYKAVTWVSNLVSVFAMSLYPIRQTLAYFNKEKEA
>NZ_AP021846.1|WP_152086502.1|2624273_2624837_-|hypothetical-protein
MNELLSRLGNIVDIYIGLIVFWFLVTQLPVYRWRLFFAKKGQITSLQEHEIYSGFITSVCFLMVRFTNDLMTPYLLMFDSGMNSRIKVFYLSGIVINTALITMIFVVHELRSCLFSKASRICLYATLLVMSLFFLQLGARGYVNFHGFNNAYSLGIWLAILIAISAMSLYPIRQTLAYFNKEKEAKD
>NZ_AP021846.1|WP_152086503.1|2625103_2625670_-|hypothetical-protein
MSPLSELLNELAAIINGYLTLILLWFLVVYFRQCSWRLLFARGEQIQSLKQHELYSCFMTVFWFVIFRHFGGEMEHYLLSLDFELYGKVKVFYLSHLAMSSMLILVIFINHRLRKCLFSASTRVCFYSILIVLSLLFMQLIARGYFSYHELKVIYKTGVLMSILIATAAMSLYPIRQTLAYFNKEKEA
>NZ_AP021846.1|WP_152086504.1|2625988_2626684_+|MFS-transporter
MSATNNKSSGFFSQILFNIVIPAIILTRFSGEAHLGPTLGVIIALLFPLGFGLWERHKTGKFNFLSGLGFVSVLLTGGISLLELDAKYIAIKEAAIPGLIGIAVIVSQYTKYPLLKTMLFNESVMDIKKIEQALEQKGNSEKLSKVQVVASNILAGSFFLSSVLNYVLAKMIVVSPAGTEAFNNELGRMTALSYPVIALPTMVLFFVALFYLFSSLKKLTGLKVEEMLVEQ
>NZ_AP021846.1|WP_152086505.1|2626775_2627663_-|LysR-family-transcriptional-regulator
MSRLNYHHLYYFWRVAVVGNLTQVAKELHLSQSALSTQIRALEQRYEVKLFDRVGRTLRLTDAGLRVLKYAQDIFNTGDELEQVLKFGVVATKQSISIGVLTHLSRNFVEGFISPLLAKQNVQIKLSSRGLINLLDGLVNHEFDFVLTNRMVGNDNNQQAWQHQLLRRQAISIVGPAGKKPTTPFPQGYENINWVLPATNTEVRSAFDSICAVNQYKATILAEADDMAMLRLLSRDSGACAVLPPLVVLDELKSGVLEEYQVLPNTYEHFYAISLPKKHHSEAVLDLLRLDESSL
>NZ_AP021846.1|WP_172971601.1|2627760_2629293_+|NADH-quinone-oxidoreductase-subunit-L
MLDYVVFALLLLVPLAPAVVGFWAGWTLQTDSKIAKKALLGIQMSIVSFALLVLMYAVFPSSGTLELARLTPLTWVITSLVLGIGWVVTRFSRQYMRGEPRLGYYYRWLLFTLSAVLITVLANNLLLLLFGWVMISLSLHRLLVFYPNRARTLLAAHKKFIIARVSEVSLAIAFWLIYEQTGTANISAIFDMVNNAQLVSSSELTVAACLIALTAILKCAQLPVHGWLIQVVDAPTPVSALLHAGVINLGGYLLILFAPVMQLSPVANGLLLAIAGISLLLSALIMQTRVSVKVKLAWSTSAQMAFMLIECALGFYELALLHLIAHSLYKAHAFLFAGSTVQQYQNVLLAKSSTHSHLRLVFSIIVCALLVGLAATLVHSALSLWLLLGIGLSFHLYGQAHSVKNQLIALLSAIMMIALIVVWKSFASHWFNLPNSGNVNIWADVYLICIVTLLLLCANQLHKKQASGITSRFQNAFFAGLYLDEWLTRFTQRVWPTRLTPAYLNDSSRS
>NZ_AP021846.1|WP_172971602.1|2629309_2631715_+|DUF2309-domain-containing-protein
MNIALDPTQLANTPTLLDTLQQVSQQVAPNWPLDQMIAVNPYWQMRDMPISQVAAQLKAVANINVVWPCARYVKHYHQGGISDQALKQAISEHPTLNHLTLGELIAASTNISVTDAQCLSFTAYVEQQNCQTQLSLSQELNSHISQFCAWYFQHYDSCPTKQESGHLYQQYQNFVAQDKGISLLLDIKGLHKKYAALPKSVEALITKCEHSFALPPSAWPFYSKNLLLQLNGWASWIAYLNWQANLYAKPAAWHLDLIAIKLGWELVLFEHLQSTNKTVFSHINKQWQFEQAHVQERVKTISEQQAYQFIWWRAKEIQYQNELAAQLTKTEGTNITSDTQLQAVFCIDVRSEVLRRHLEAQDDSIETHGFAGFFGLPLELKLKHSPLTRPQLPGLLAPILSVSPLNTPHSLLASRHQAGHWDQVYKHPASSLPIVETAGWMALAKIIKRTFKPKRSNKVLCAAGKTDEWQIEQAGVALSLEQKADLAQKVLHLLGFKAFAPLVLLVGHASHNENNLHAASLDCGACGGQSGEVNVRVLCSLLNDSSVRKALASRGVTLPETTRFAPAIHNTTTDEVTILSKVDSHISHWFEHATKATQNERAVRQSQADERTLSSLPQELNRRQLDWSETRPEWGLANNAAFIIGPRILTRNVDFNGRTFLHTYDETLDPDGSTLELLLTAPMLVTNWINMQYNASVSAPDKFGSGNKVLHNAVGGHIGVFEGQGGDLRVGLPLQSVHDGQKWMHEPMRLTVVVRASKSLLERIINKHPDVQQLINNQWLYLWQWTDEGLQQYANGTWTNL
>NZ_AP021846.1|WP_152086508.1|2631775_2632609_+|hypothetical-protein
MKQAHTHIDWSTSTIALLTKHHKQPMIEPALSQLGVRLFTTDQFDTDTLGTFSKEIPRTLNALECAKKKAYLAAKMTGERFGLGSEGSFGGGPYPGIVQWDDEILVLHDSDANEDIVSIASGPVPLRSVEFKHIDQLSETLWQTPTQGWMLNINNAWFKGITTQQQLKTILKQHHWESGQPLTLQPDLRAMHCPPRQHMIKKAAEQLANRMQSRCPQCNTPDFWVSKTRSGLPCKTCQLPTQVARCAIKQCKFCDFTLEQPNEHKYANPSHCQFCNP
>NZ_AP021846.1|WP_152086509.1|2632676_2633096_-|DUF4177-domain-containing-protein
MKISANRVVELRKSRSWSQSELARLAGLNLRTVQRIEREGVASTKSKNALADVFGLSSSDLDKTSPTNQYEFKVLEIAFDSNISLELNSPLALELNTQLNKHGQAGWKLAQVIAPESIAGGFSVPSKKLLAIMQRAINK
>NZ_AP021846.1|WP_152086510.1|2633493_2636439_+|TonB-dependent-receptor
MQKYNKICISMLGMFATCATTYALAAEANNDIDNVERIAVTGSRLLSIEAASPSPVTVIGEDLIQASGATDIAELLNKLPSMAPGLSSATSNYNGNAGMSTQDLRGQGAKRTLTLVNGRRHVGSIPGESTVDISSIPTGLIKRIEILTGGASSVYGADAVAGVINIITKTDYVGSKLNVSAGISSRSDGEKHGFNFLHGLNFNNDKGNATFYFSYDKEDEINAKDRPYTNSNWAYLPNPEHLALKEKLFAEGKTSQQVTDITDKDNIPNNLSARRYSISASPTTVVFIGGVAYTFNVDGSMRPVKLGNSGELYRPENGLTGIQTDEGGEQLGAYEFQRLRVPVEKAIFNNTINYEFDSGYSFSLDTKYVKTESESRVFPNSLYGSVPLSRDNAFIRPDLGAKMDEYEMSYLPIARHFTEMGLQGTDYKRDVFQVVASLQGAFSNNWQWEFYAQYGKASSDDTTVNSYYEDRWRASLDSIRDENGNAVCRASVDASAAPIPGRDYSNCIPHDVFTPMSDELLDYVKLEHTSTESQTQKVVHFNTSGDLFEGWAGPIALSVGAEYRKESSETSPSDVLRDGIGASYAIEKPVIGAYDVKDLFLETNIPLLKDVFMASKLDLNLSVRSAHYSEAGQNTSWNVGTVWQPIEDITLRVSRSRSARAPNINEQFTTEGEGFEWLYQPCSQNRIKSASAQVVENCKKLGVNVFTDQTGETTSDIRWYQPGTIVNSGNRDLDVETANTLTAGFVITPTAIDNLELTFDYWDIRLSGLIDNFNVATVVDSCVEQSSLDNQFCALLTRQPDGIITHVNLKTLNLNQRRTSGLDIIANYKFDALGGTFAINTIVQRLIRRDIQTDPTLDLEPTVSLFAHPEWKATVNLSYENEQFRVGTATRYIGEQRYRENYTASTVNPHETPSMFYTDLTASYNISETMRLNVGANNVFDKKTPQMPNAYSGGANYYLGTDGGLFDTLGRTYFASFNWEF

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Crispr_ID: NZ_AP021846_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_6

2943390-2943472

Orphan

Consensus_repeat	Method
TTATGTGCAGCTGAGGTTATTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021846_6

>merge|NZ_AP021846|6|2943390-2943472|CRISPRCasFinder
TTATGTGCAGCTGAGGTTATTTAGCTCGCTAGAATGATCAATGTATTAATAAAATTGGTATTATGTGCAGCTGAGGTTATTTA

>NZ_AP021846|6|6|2943390-2943472|CRISPRCasFinder
TTATGTGCAGCTGAGGTTATTTA	GCTCGCTAGAATGATCAATGTATTAATAAAATTGGTA
TTATGTGCAGCTGAGGTTATTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152086737.1\|2929855_2930803_+\|glycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240639
NZ_AP021846.1\|WP_152086741.1\|2936404_2937811_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224787
NZ_AP021846.1\|WP_152086738.1\|2930969_2931344_+\|DUF3192-domain-containing-protein	unknown	unknown	gnl\|CDD\|378660
NZ_AP021846.1\|WP_152086750.1\|2948457_2948970_+\|TIGR00645-family-protein	unknown	unknown	gnl\|CDD\|179964
NZ_AP021846.1\|WP_152086747.1\|2946024_2946279_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224314
NZ_AP021846.1\|WP_152086745.1\|2943845_2944985_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173790
NZ_AP021846.1\|WP_152086740.1\|2932572_2936289_-\|response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_AP021846.1\|WP_152086754.1\|2954158_2956315_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086742.1\|2938085_2940983_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_AP021846.1\|WP_152086746.1\|2945037_2945763_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|119397
NZ_AP021846.1\|WP_152086752.1\|2951577_2951967_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086743.1\|2941096_2941750_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_AP021846.1\|WP_152086751.1\|2949254_2951240_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173803
NZ_AP021846.1\|WP_152086749.1\|2947012_2948293_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_AP021846.1\|WP_152086753.1\|2952429_2954109_+\|hemolysin-D	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086736.1\|2929367_2929781_-\|Zn(2+)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|181924
NZ_AP021846.1\|WP_152086739.1\|2931657_2932572_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|226229
NZ_AP021846.1\|WP_172971615.1\|2928121_2929384_-\|SO_0444-family-Cu/Zn-efflux-transporter	unknown	unknown	gnl\|CDD\|223773
NZ_AP021846.1\|WP_152086748.1\|2946298_2946886_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153250
NZ_AP021846.1\|WP_152086744.1\|2941886_2943203_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349914

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152086737.1\|2929855_2930803_+\|glycerate-dehydrogenase	gnl\|CDD\|240639	cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	4.90419e-160
NZ_AP021846.1\|WP_152086741.1\|2936404_2937811_-\|PhoH-family-protein	gnl\|CDD\|224787	COG1875, COG1875, NYN ribonuclease and ATPase of PhoH family domains [General function prediction only].	6.31657e-170
NZ_AP021846.1\|WP_152086738.1\|2930969_2931344_+\|DUF3192-domain-containing-protein	gnl\|CDD\|378660	pfam11399, DUF3192, Protein of unknown function (DUF3192). Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed.	2.5717e-37
NZ_AP021846.1\|WP_152086750.1\|2948457_2948970_+\|TIGR00645-family-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	1.16854e-64
NZ_AP021846.1\|WP_152086747.1\|2946024_2946279_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|224314	COG1396, HipB, Predicted transcriptional regulators [Transcription].	9.81858e-05
NZ_AP021846.1\|WP_152086745.1\|2943845_2944985_+\|S8-family-serine-peptidase	gnl\|CDD\|173790	cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins. The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.	1.10829e-62
NZ_AP021846.1\|WP_152086740.1\|2932572_2936289_-\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.95021e-75
NZ_AP021846.1\|WP_152086742.1\|2938085_2940983_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_AP021846.1\|WP_152086746.1\|2945037_2945763_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.3133e-21
NZ_AP021846.1\|WP_152086743.1\|2941096_2941750_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.67363e-97
NZ_AP021846.1\|WP_152086751.1\|2949254_2951240_-\|S8-family-serine-peptidase	gnl\|CDD\|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	5.61671e-66
NZ_AP021846.1\|WP_152086749.1\|2947012_2948293_+\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	3.75193e-134
NZ_AP021846.1\|WP_152086736.1\|2929367_2929781_-\|Zn(2+)-responsive-transcriptional-regulator	gnl\|CDD\|181924	PRK09514, zntR, Zn(2+)-responsive transcriptional regulator.	9.90021e-60
NZ_AP021846.1\|WP_152086739.1\|2931657_2932572_-\|diguanylate-cyclase	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	9.07541e-54
NZ_AP021846.1\|WP_172971615.1\|2928121_2929384_-\|SO_0444-family-Cu/Zn-efflux-transporter	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.36366e-24
NZ_AP021846.1\|WP_152086748.1\|2946298_2946886_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153250	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.	8.93383e-73
NZ_AP021846.1\|WP_152086744.1\|2941886_2943203_-\|amidohydrolase	gnl\|CDD\|349914	cd05664, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, Uncharacterized subfamily of proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	1.0007e-167

>NZ_AP021846.1|WP_152086744.1|2941886_2943203_-|amidohydrolase
MKKRLLSLCVLFASYTNATSLASNVDNDMAKLESLYLHLHQNPELSYHEKNTAARLAKELKQLGFDVTEHVGGHGVVGLLKNGDGPTVMIRADTDGLPIVEQTGKPYASKVKTLDNNNNEVGVMHGCGHDIHMTSFIGAAKQLVALKSNWQGTLMMVAQPAEEVGAGAKAMLKEGLFSQFAKPDHVLGLHVSASVPAGKVAIAPGYALANVDSVDITVKGKGGHGAYPHTTVDPVVLASRIVLALQTITSREISPLQPSVITVGSIHGGSKHNIISNEVKLQLTLRSYDPQVREQQIATIKRLTKGIALSAGLPDEMAPLVYVHEEETIPSTYNDPVLAGRVTQAIKNELGENNVWKSEPVMAGEDFGLYGLTDEDVPITIFWLGGVEPMLYEKAQSSGETLPSLHSSKFAPDYAKTIHTGVRAMTASALDLFNVNRE
>NZ_AP021846.1|WP_152086743.1|2941096_2941750_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MLLNYAPPRDPYLDVLYQDDYMLVINKPSGLLTVPGKDPKHADSAISRVNTVFPTARIVHRLDMATSGVLCLAMSKESHRFLSIQFQDRLTKKHYIARVYGKLEQQSGSVDLPLICDWPNRPKQMVCHESGKPSLTHFEVLNYEAHATRVKLTPITGRSHQLRVHMLSLGHVILGDRLYAKDEALAAAPRLQLHAEMLQIRHPQTEQLMTFEAPVPF
>NZ_AP021846.1|WP_152086742.1|2938085_2940983_+|RNA-polymerase-associated-protein-RapA
MNFSLGQRWISDTESDLGLGTIVALEGRQVTILFPASGENRVYSMQEAPVTRVVFNPGDVIRHVEEWELQVETLEQQGDLLCYHGIRLDTQEKTSLKETFLDHFIKFNKPQDRLFAGQVDRFDRYTLRYQTWQHQFNRQQSHLKGVVGQRASLIPHQLYIADEVGKRFAPRVLLSDEVGLGKTIEAGMILHQQILTGRANRVLIVVPENLQHQWLVEMLRRFNLRFSIFDEERCDEAFADSPNVFDTEQLVLVSLEFITKKRRWFEQATLADWDLLVIDEAHHLTVTKDKPSTEYLRMAELSQDIPGLILLTATPDQLGHYSHFARLQLLDPDRFYDYDKFVEEESHYKEVAEAANQLLHDGALDDKGQATIIELLKETDISSLLSDAQGGDESAKQEILSMLLDRHGTGRILFRNSRSGIEGYPGRKLHSYPVELPKQYKTAMSVLGSMGGIQSAEKSALRALFPEKIFQEFEGEGSGWTAFDPRVNWLIDTLKSLKHEKVLLICAQAQTAISLEQVLREREAIKAAVFHEGMSIVERDRAAAFFADEYDSAQVLLCSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGRLDRIGQKFDVNIHVPYFENTAQEVLLRWYQEGLDAFETTSTTGQLLYKEFSEELLELISEHNCDEESLDPLLEQVAKQNRVLRSQMEQGRDRLLELHSSGQGKAEKLVSEIELLDDDVVLPAYMINAFDIFGVSQEDKGENTIILKPTEHMLNPSFPCLKDDGITVTFDRATALSQEDAHFISWDHPMVQGTMDMICDDDFGSASVALLKNKKLPVGTFFVELIFIAEASAPKALQVGRFLPPTPIRILLDKAGNNLAANVAFDAFNSQLSAVGRQTASKLANALQSAIHPLITKANELASNELDSIQAHAQQKMLDVMNDEQSRLVALKTINPNIRDEEIKVFDKQRTELTSHISKAQLKLDAIRLIVVTHD
>NZ_AP021846.1|WP_152086741.1|2936404_2937811_-|PhoH-family-protein
MGKDQDLDRKVYVLDTNVLLHEPLAYLSFQEHDVVIPMTVLEELDHIKDRKRDVSRDARIAIRSLDDVLKDASPEQMLEGVRLPSIQSDKEHGPLARGKLVIVNDHLFPDSISGLPGNENDHRIINCAVRLQKQYSEKKVVLVTKDINMRLKAKGAGLKFVEDYRTDQLIDDIKLLSTGFLKISGDFWQNVGECTSQQQGRYTLHHVPKALLPDVFCNEYLIDDSEHFAARVDSYDDEHITLKDLSRERLMHQMAWGVKPKNIYQGMALDALLDPDIELVILTGPAGCGKTLLALASALEMIIEKGIYDKVIVTRNTPEIAESIGFLPGTEEEKMAPWLAAITDTLEVLHKNDESPISSRNYIMEKANIQFKSVNFMRGRSIQNAVVILDESQNLTASQLKTIITRCGEGTKLICTGNLAQIDSNYLTPVTSGLTYLVERFKHFEGSATINLNGVVRSRLASFAEEDL
>NZ_AP021846.1|WP_152086740.1|2932572_2936289_-|response-regulator
MDETQDFIPLKKYRRAALAGLFMSIFVAGFLCLHLYHIKLNRAFLEHQAYYQAIDSQVKQKSAQASNVIDNIFTSIELPLSYQFEESILQTLDKTGSYYHKLAADGGEVVVRRTLQKDASVPDNWQQILALGPAFNTALSLIPSLDAIAYVKEGQFAFVRRRNADTSHLLSAMLDGELAPDFSKYNLSSSQRVKIEDKYYFSVAKQSGDAKGEYAMLVYDSEDIADWLNELTVEHVKVSLLNSDKRSLLNDEYIELRPKNNTSNAIPWLGGVQLYSLRGYGPIDVVYEQDEMQFIKPVLFEVLLEFSFLMTFMVAIYVLLSWLGNRIFIRPVSYFLNYLTHQEQTPKSTFDYIVPTDWQPWFKTVKKVITQKQSLLEQLQRNNEILDEQVQSQKKALSRSLEAKERQAALLNTVLDSVPDLIYFKNIDGSFIGCNKAFELFLGIEKSSLVGRELHEITCLYPELLSLEQQMHEQMQAITQTVVLDDKSYLLTLSPFLDSQRGILGSLGVARDISAQQQAIKALQTSEENFKAAMEYAPNGVILVSLEKEVLAMNKAARRYLECSGFQPNIHLSSLFSSDNYLAISHILSMLLKNTKNVLELSISQKPPYSWLQLSVSLVWDKAKVAKYYVLHLQDITSLTQAKLDAERATLAKSRFIANISHEIRTPLNVIQGVVGIMKKQYCSEQHLGMLAKVEHASHQLLSMLDSILTFAKVERQKQAVCIEPFCVATLIKDCQELIAPLSEQKQLSLSLKIDERVWPILQSDVNKLKQILLNLLNNAVKYTQKGSITLKLSVITDNKEQQLIRFCVADTGIGIKIEDQQRLFDAFTQGDESLSRQHEGIGLGLAIAKHEVSLLGGSISLSSELDKGSEFSFSLNFDKAECAIRQEHAPVLWLCGKDKVKHLLGLHDICVVHSANEAAQELVKKAYKSLVICERSEANALAQYMPKQVGSLKHVITTDPSFSLPTLRSTTVMCEPEIMFSQSVLCFLTHQQMTSESPQMQQEISGCLCLVVDDNSLNLDITENMLRTLGANVVVLNSATNLVDVVSALQPDIIFMDIHMPSIDGFQATHMLKEALPEFTKPVVALTANAQTSEQAQALEVGMSDYLTKPVAHNLLHQTLQQYIKSETSFFDGQLALQQMMGNAELLNKMLDKFANMCTEYLQKVVAQNDVVKLQMMAHNIKGAAGGIGFVALSKAAMQLEQYLKQTNQLQQSHLVTQLMMRLTQAREYILMQNKGR
>NZ_AP021846.1|WP_152086739.1|2931657_2932572_-|diguanylate-cyclase
MLSSAHVLVVDSDPLNRVVLENTLSEDCQVTICDSSASALEIIASQNVDLIITDIRLVDDSGVLFLEKLKESPATYMIPVIIISLSNSYSDEVKGLQIGAVDYITKPFSPLIVKARVKIHLALKQKSDLLEKLASIDGLTELPNRRLLDKHLAQQWQLCQSTEQSLALMLVDIDYFKAYNDVHGYAGGDECLVKVAHALEEVINHRQGFVARYDGVRFCVVVTGEEPAQVESLCQAMHDAVDQLLLPHKASPICAHVSISIGTVIVNRDFSIGIACCLKAADDALSQAHANQERIVVVSNLSAG
>NZ_AP021846.1|WP_152086738.1|2930969_2931344_+|DUF3192-domain-containing-protein
MKKLLLIAALATPLLSGCIVAVSDGEVEHRWAKHNGNWEKTFHDNRQKIAKLSIGADYQSVLDSFDTPEFTELVKKGDNVYQVLYFGTNSKHSDGKVTKDECTPLVFKDSKLIGFGQSAMAEIL
>NZ_AP021846.1|WP_152086737.1|2929855_2930803_+|glycerate-dehydrogenase
MNIVLLDAKTLADTSLSPFQQFGQFTAYDNTPPALVVARCQHADIVITNKVRLDAKELAQLPNLKLICVAATGTNNIDLNAAKAQGVTVTNVAGYSTASVVQHTFTLLGNLLGNVHQYIKDCEQGLWQQSDMFCRLDHPITEIAGKCFVIVGYGTLGKAVAKVASAFGAQVIIAEHQHSKTIRPGRTAFESALQQADIVTIHCPLNDKTKDLFEHSTLALLKPSAVLINTARGGIVNEKALVNALEQGQIAGAAVDVLSNEPAQSNNPLLNYKGNNLLLTPHIAWASKESIERLVQNLTQNIKSYVQGHTQNIVE
>NZ_AP021846.1|WP_152086736.1|2929367_2929781_-|Zn(2+)-responsive-transcriptional-regulator
MKIGELAKSLGVSTDTLRYYEQHKLLTPSARTESGYRMYTQEQQRQMQFILRAKEVGFSLKEIRELLQIQIEKHQHSCEEVKEITLLKLQLVRGRIAELQRFEQSLSKLAKRCCGGPESADFCSILTALEDVDGTCN
>NZ_AP021846.1|WP_172971615.1|2928121_2929384_-|SO_0444-family-Cu/Zn-efflux-transporter
MELVINFWQLFLLSAPWLILGLLLAGLLNVFIAKDFLQRHLGQEGLWTTIKAALIGAPMPLCSCGVIPAAIGLRRAGGSKSATTAFLVSTPETGVDSISVSYVLLGPFMAVIRPIAAVSSAIVAGVLVGKEKKPKPVNEQTAEATSTASVLHTTSHHSCDATKPQSNIVQPSCCTPKEAALVHASCCDDKSIVNEKNSDCCAPEQKQDSSDSCCASDTTSQAQTLMDKLVQAVKFSSNKLLSDTMVWLMIGLFFAALVQTYVPESFLSQWGSGVLAMLVVILISIPMYICATASTPIAAGLIMAGVSPGAVLVFMLAGPATNIATLGVVAKELGKRAVVAYLGAVIGVAILFGFLTDFLVSEYGFTVEPMHQIQHEVLPHWLTLLSAWVLLVLMARLIVLAIWEKCRRNSKSGTCKGGQT
>NZ_AP021846.1|WP_152086745.1|2943845_2944985_+|S8-family-serine-peptidase
MKKSLLTLSIAFAISSTSTFAQEPSYQGAAADIEIANTCIVRFNDGISKFDVEGKARGMVAKANAQAKHIYKNSIKGMAVNMSCDKAKVAFSGNADVMRFTPDGIVHASPAAKGKPGGGGNQAQQTPWSVTRVGGPVDGSQYTAWVLDTGIDLDHADLNVDTSKGFSAFNKGRDAGMDDGNGHGTHVAGTIAAIDNNIDVVGVAAGAAVVPVKVLDSRGSGSWSGVLAGIDHVAANASAGDCANMSLGGGFNQELNDAVENAAQQSGAFFVVAAGNESQHAGNVSPASASHNRVYTISATDSNDNFASFSNYGNPPVDYAAPGVGILSTRSGGGTTTMSGTSMASPAACAVIMMSNGNPSTDGRAIGDPDGNADSIVHL
>NZ_AP021846.1|WP_152086746.1|2945037_2945763_-|XRE-family-transcriptional-regulator
MSENYSGKSVSNDADGASFSTRVEQAIKPDSIRTFASKIGVSEGTLRRILKGEDPKLSVIERIAEHASVDFMWLVKGVGDASGSNYESPLLSQRVVSVDEFEEEFILVPGYHISVSTGHGAFNGTARIERHLAFRKKWVDYKGLDKSQLAVVFAKGDSMEPTIHNNNTILVDLSDKKLSEGLIYVVRLGEELYAKRLQQYLDGSVRLISDNKEYVDQHIQPHELEQLEIIGKVVWIGKDLA
>NZ_AP021846.1|WP_152086747.1|2946024_2946279_+|XRE-family-transcriptional-regulator
MLSHINTDTHKTPKGADILKFARKCRGFTQAESAASYGIEERTLRRWENNEYNPRWNDVIGLLEDVYLMDVAKVILGMTHTKEP
>NZ_AP021846.1|WP_152086748.1|2946298_2946886_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKNIPEQIPRTSGALPRMLGMLVLKVLGWRIDGTFPAQRKFVAAVAPHTSNWDFFIAIAVKLSLGVKIKFLGKHSIFIGPLGWLLKKLGGIPVERSHNHGIVEQVSDAFKQSDSLILGIAPEGTRKKTSRWKSGFIYIAKSANVPIVPMALDYRTKTFVIMPPCYIKHDIDIELNNIIALFDKEMAKYPEQVSGN
>NZ_AP021846.1|WP_152086749.1|2947012_2948293_+|amidohydrolase-family-protein
MKNALLNSLTSLLFICGYAHGQTTIINAKAYIDVETGKKFTNPSLLIEDNRIVRVAKQGDIKSPQGATIIDLSDKTLLPGLMDMHVHLTSDPADNFLAAQNYSIPRKTVKAVKNAHTTLMAGFTTVRNLGAPGYSVIATRDAINAGEIDGPRIYSAGYSISITGGHCDDNFSAPEKKAVSGGVADGPWAVRAKVRENIKYGANTIKICATGGVFSKGTKVGVQQFSEQELKAAAEEAHLRGLIIAAHAHGTNGIKAAIRAGIDSIEHCSFMDDEAIALAKQHGTYLSCDIYNTEYTLAFGEANGVPEENINKEKQVSTAQRESFRRAVKAGLNMVFGSDAAIYPHGDNAKQFSRMVQFGMTPLQAIQSATINSAALLKNPEIGKISEGYLADIIAVDDDPLNKINTLENVRFVMKDGKVLKYTTQN
>NZ_AP021846.1|WP_152086750.1|2948457_2948970_+|TIGR00645-family-protein
MREKIETNFERMIYAGRWLLAPLFAGLFVAIILLLIKFFKLLGVMVLNTLNATNGQMLINILTLVDTALLAGLLIIIIFSGYETFVSKLNINQHEDRPSWMGKVGFSGLKIKLISAIVAISTIELLKVFIDWRSYTEDQLFWKVAIHMTFVVSGILFSITDFINSKTQHH
>NZ_AP021846.1|WP_152086751.1|2949254_2951240_-|S8-family-serine-peptidase
MNKQFALSALAISLLATSSMSATASDSKTYIVKRNNLKAIAQSTLAGADNIQRVLQDNKLDTLSKTSFAEVSTITLNQQQVEMLKRSGQFDYIEEDFEYEMLSNAQVSPYGIAQVQANLLSDANADLLKVCIIDSGYDLGHPDLPQNATGFADAEVGVWYRDGSGHGTHVAGTVAAVNNSEGVVGVLPSDKVAIHAVRVFDDNGKKGYNSRIGRAVDNCVENGANVINMSLGGAGKSQYLEERLNAAYDKGVLLIAAAGNGGDSSLSYPASYDNVMSVANIDEQRQKNESSQYNAQVEISAPGTEVLSTVPRGTGIVASISGLGQAFEASGMTHSVEGNVTASLVDCEQGLAQCTAPASICLIERGGASFADKAKNCQAGGGVAAVIYNNVATSFSGTLGDANHGVTIPVLGMSGDAGAALKGLLKQQVNVQLEAISDYDKKSGTSMASPHVAGVAALVWSNHTQCSNVEIRQALTATAIDLGDAGRDHKFGYGLVQAKAASDYLTANGCGGGSKNQLPQAAFSVSCEALSCQFDAGTSVDPDGQITAYEWRVDGQAYSGAVAAHVFSQAGSYQVSLTVTDNLSATANAAKTITVSDDSTGGDCQGIAPWSATQVYTSRGTLVSYQGKKYRNNWWNINKNPAQHSNVGNSWKVWTDLGVCN
>NZ_AP021846.1|WP_152086752.1|2951577_2951967_+|hypothetical-protein
MSNTSQKKAFSYSVDIYHNLGYILVVAQGCGSKSDIKNMYQTIGKAAKIAKIDKLILNGTQLTLDYSGSDVIKVLKMIARLFNHFYIARVITPADFKSDLIDVFAQRHALNIKSFFNEHDAYEWLITQS
>NZ_AP021846.1|WP_152086753.1|2952429_2954109_+|hemolysin-D
MKKLSLCLTLAISTAPSLAFTQLGGSGAMPMGHEWLTRTAALELLDAEHIIAPDPNDPRLTWQSGLAKNTDLNGAYSEVSEFISTPNNNKNYQPRFDNVYAAIVGERWVDIAGFNVTNASADPTGPNCFSAVSQEPADLQQDHFMRRYDDIGGQGGVDAARRAQQRFVNHFVDAAMAENKRIKVWDGGGYSALAEVDHNYFLFGRAVHLFQDSFSPEHTVRLPTDNYEKVWQVKAYLCSEGAEQHSHDTKDILNFTSGDVIWKTHTRLESGWDSYKVSSMKPVALVALEASKDLWAGFIRTMATHREEREAVAKAEAQRLVDNWLSFDEQAMLNWYDNQQHRDHTYVLAPNESGVGKTLNECMLELNVGTTSQTQRVAELEAQRRQCLYNIEAEPGYEDLYDPHMSMPYNWRWKSLTWQTPPSDWQASKQPADKGQTITFKSALNAQSVKSNGALQDGAKLITAHGEALEFIKVPTQDGAFYLRSKHQPELFFSYSASSSGYAKLVNSPRQAAYRLIYQGGVWNIKNTHWQQYFWADDSNIYLNRHGDPQRTSAKWIIE
>NZ_AP021846.1|WP_152086754.1|2954158_2956315_-|hypothetical-protein
MYQTYCQGFVFLIILVLSSCKTIDEGEVDYVRTVSGLATVSLHEGACSEKLYQQSLHTRDGFSRNCYESLHRKYTDVPMIRKGESISVHLMQAFIQDATESKSTMETIRGVATNAEVAVIANVCEQGIKGCGLEFGPSSDAKGRVVYFSNGVKAKQYLNFSYLPVYGPIEYQGGPLIIQLAIIELDNMTEEQKALLTKLAEIGKQKFAPASNVLSVLDGLGSSLLSGGGDDVIFRYTFTMMPDGADKGYAFPTISAGNFAFVKKKTIELEQEKQIWDELKFDSLTGRLVKKCSNKDANLAQYRDVEKKKATETIDYSPCTRSSDGKTHGYKDYRDNTYMTLQVQSGFSPRTLDKSQTLNELLNELSGSLPKNAEQLQKDIEKLTESYYQATTLDNLKAPLSSMALYSAKNKQSLLDQFEISAHIFENSLAQVISDKSCDAEKDPCPYMLTNEQILNVISHARLLLTKLGYKGSLDAVLPLDFKLEAYTNKTVGNTIASTLISAYKKHEQTRHYQTLSTILRDIHHTVAKLIQLAQSEKPELDSTSVVNAGVKLLAFLEALLDEQQKVKLTQCSIKPDQKVCQHLLTQTQLKAINLEMFHFLDTLKASPQQCNSNGVNLAQQRLAAFIVSNFISITQAQATTSTKAQLGQLIRTQLNALTEQQLGADKSTLVNLITSNLNTMSKEQLQALNKTSLVPLSIIDADNIVVFMHCLLTPKES

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Crispr_ID: NZ_AP021846_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021846_7

2960418-2960589

Orphan

Consensus_repeat	Method
TGACTCATGGGACATCCACTTTAAAAAGACATAAGAAAGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021846_7

>merge|NZ_AP021846|7|2960418-2960589|CRISPRCasFinder
TGACTCATGGGACATCCACTTTAAAAATGCATTGACTCATGGGACATCCACTTTAAAAAGACATAAGAAAGAACCTTCAACAAGCTATCAATGATAAAACAACTGACTTTGTCACTAGATATTATCAACATGACTCATGGGACATCCACTTTAAAAAGGCATAAGAAAGAAC

>NZ_AP021846|7|7|2960418-2960589|CRISPRCasFinder
TGACTCATGGGACATCCACTTTAAAAATGCATTGACTCATGG	GACATCCACTTTAAAAAGACATAAGAAAGAACCTTCAACAAGCTATCAATGATAAAACAACTGACTTTGTCACTAGATATTATCAACA
TGACTCATGGGACATCCACTTTAAAAAGGCATAAGAAAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021846.1\|WP_152086757.1\|2959594_2960116_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_AP021846.1\|WP_152086755.1\|2956649_2958902_+\|cytochrome-C-peroxidase	unknown	unknown	gnl\|CDD\|188554
NZ_AP021846.1\|WP_152086754.1\|2954158_2956315_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086759.1\|2964020_2964353_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086750.1\|2948457_2948970_+\|TIGR00645-family-protein	unknown	unknown	gnl\|CDD\|179964
NZ_AP021846.1\|WP_152086756.1\|2959048_2959405_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100007
NZ_AP021846.1\|WP_152085814.1\|2962477_2963632_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|226077
NZ_AP021846.1\|WP_152086748.1\|2946298_2946886_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153250
NZ_AP021846.1\|WP_152086761.1\|2965058_2965406_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|260004
NZ_AP021846.1\|WP_152086752.1\|2951577_2951967_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_172971616.1\|2961808_2961982_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086760.1\|2964631_2965048_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086751.1\|2949254_2951240_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173803
NZ_AP021846.1\|WP_152086762.1\|2965531_2965753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086749.1\|2947012_2948293_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238624
NZ_AP021846.1\|WP_152086758.1\|2960658_2961767_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372671
NZ_AP021846.1\|WP_152086764.1\|2966885_2967410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086765.1\|2968221_2969097_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_AP021846.1\|WP_152086763.1\|2965840_2966764_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021846.1\|WP_152086753.1\|2952429_2954109_+\|hemolysin-D	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP021846.1\|WP_152086757.1\|2959594_2960116_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.95863e-12
NZ_AP021846.1\|WP_152086755.1\|2956649_2958902_+\|cytochrome-C-peroxidase	gnl\|CDD\|188554	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family. This model describes a subfamily of di-heme proteins related to the di-heme cytochrome c peroxidase and to MauG (methylamine utilization G), an enzyme that performs a tryptophan tryptophylquinone modification to the methylamine dehydrogenase light chain.	2.26373e-36
NZ_AP021846.1\|WP_152086751.1\|2949254_2951240_-\|S8-family-serine-peptidase	gnl\|CDD\|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	5.61671e-66
NZ_AP021846.1\|WP_152086765.1\|2968221_2969097_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	4.8154e-36
NZ_AP021846.1\|WP_152086749.1\|2947012_2948293_+\|amidohydrolase-family-protein	gnl\|CDD\|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	3.75193e-134
NZ_AP021846.1\|WP_152086750.1\|2948457_2948970_+\|TIGR00645-family-protein	gnl\|CDD\|179964	PRK05208, PRK05208, hypothetical protein; Provisional.	1.16854e-64
NZ_AP021846.1\|WP_152086756.1\|2959048_2959405_+\|RidA-family-protein	gnl\|CDD\|100007	cd06150, YjgF_YER057c_UK114_like_2, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	2.66468e-57
NZ_AP021846.1\|WP_152085814.1\|2962477_2963632_+\|IS110-family-transposase	gnl\|CDD\|226077	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.0424e-23
NZ_AP021846.1\|WP_152086748.1\|2946298_2946886_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153250	cd07988, LPLAT_ABO13168-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ABO13168. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are uncharacterized phospholipid/glycerol acyltransferases such as the Acinetobacter baumannii ATCC 17978 locus ABO13168 putative acyltransferase, and similar proteins.	8.93383e-73
NZ_AP021846.1\|WP_152086761.1\|2965058_2965406_-\|hypothetical-protein	gnl\|CDD\|260004	cd09272, RNase_HI_RT_Ty1, Ty1/Copia family of RNase HI in long-term repeat retroelements. Ribonuclease H (RNase H) enzymes are divided into two major families, Type 1 and Type 2, based on amino acid sequence similarities and biochemical properties. RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner in the presence of divalent cations. RNase H is widely present in various organisms including bacteria, archaea, and eukaryotes. RNase HI has also been observed as adjunct domains to the reverse transcriptase gene in retroviruses, in long-term repeat (LTR)-bearing and non-LTR retrotransposons. RNase HI in LTR retrotransposons perform degradation of the original RNA template, generation of a polypurine tract (the primer for plus-strand DNA synthesis), and final removal of RNA primers from newly synthesized minus and plus strands. The catalytic residues for RNase H enzymatic activity, three aspartatic acids and one glutamic acid residue (DEDD) are unvaried across all RNase H domains. Phylogenetic patterns of RNase HI of LTR retroelements is classified into five major families, Ty3/Gypsy, Ty1/Copia, Bel/Pao, DIRS1, and the vertebrate retroviruses. The Ty1/Copia family is widely distributed among the genomes of plants, fungi, and animals. RNase H inhibitors have been explored as an anti-HIV drug target because RNase H inactivation inhibits reverse transcription.	0.000203445
NZ_AP021846.1\|WP_152086758.1\|2960658_2961767_+\|IS3-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	2.71346e-26

>NZ_AP021846.1|WP_152086757.1|2959594_2960116_+|GNAT-family-N-acetyltransferase
MIIRAASLDDLPNISQLHAVSWQENYQDALSSEYLANQVFVERAALWQGRLSAPLANQLVLVAEIEGEFCGFICVFGAHHDTYGTIIDNLHVKSAAKGQGVGSKLLTAAFNWAHQHYPQHNIYLEVLACNPKAIAFYQFKGGQNIASGYWHTPCGNQVEEYVYSWPAKRPPAS
>NZ_AP021846.1|WP_152086756.1|2959048_2959405_+|RidA-family-protein
MTITRQHTNQRMSRIVTHNNTVYLCGQVCSDATQGITEQTQTMLAKVDDLLAQANSDKYHLLSATVYISDMQYFAQMNEVWDAWVPEGHAPARACVQAAMARPELLVEVSVVAAVKNS
>NZ_AP021846.1|WP_152086755.1|2956649_2958902_+|cytochrome-C-peroxidase
MIKITRRIALLASLCVLTHHAVAIEASSKNRNLDSLDDKLAQLIAQHELTGDLTTGVNIPAVDDPEVKLGKLLFFSKALSGNKDVACASCHHPYLGGGDALALPVGTLAKDANVIGPGRETITGQLYVPRNSPTIFNAWTEKRSLFRDARVEFLDWLAPEKGISTPDVPYGEADPQAGSSLLAAQSRFPVITPGEMRGFDFMVNQPNEAVRAHLAARIGNYGSAQGELFKNNWRALFEQVYGNNQNSQEVVTYSNIMKAIAAYQKSMNFTNNPWFKYIKGDKSAMTESQKRGAYLYLYLPPPPSDGGSPPDFIPTQCIGCHNTDSFTQTKVSNYHRLAFPQIGPGTGAGITKTNDLGRMHRNNSEADMFSFRSGTLLNIEVTAPYGHAGNYDTLEQVMEHYNDYRATLRDYFDNKRWCEQAQFKHAADCQALFIDAEINTEAAAKIVDDEIADGAPVLVPLELTEQELADIVNFMKALTDPCVKDAACLQAWLPQPEEGDPDGLQLRAVTDLDVPLYLPTNCQDGDTVSSGDKLKLDQGECISGKAQYFKVKVDKDNTTLYFSTRDAQATTRLFYNKSHWADPINAQVSSKTVKNEQVLRVTVNKGVHYLSVIDTHPFEGMMIATSVDSAQHEGSEQPKPIANQCLNAPSVHYGQLFDEQPVCIGSAEAHFYIKVSEPNSQIEIRTQHGIGNGDVFTGQFWPSRHFYEFTSQQNANNEYLRLDGLQPGWYFISVLGDGSNQGATIEVDIK
>NZ_AP021846.1|WP_152086754.1|2954158_2956315_-|hypothetical-protein
MYQTYCQGFVFLIILVLSSCKTIDEGEVDYVRTVSGLATVSLHEGACSEKLYQQSLHTRDGFSRNCYESLHRKYTDVPMIRKGESISVHLMQAFIQDATESKSTMETIRGVATNAEVAVIANVCEQGIKGCGLEFGPSSDAKGRVVYFSNGVKAKQYLNFSYLPVYGPIEYQGGPLIIQLAIIELDNMTEEQKALLTKLAEIGKQKFAPASNVLSVLDGLGSSLLSGGGDDVIFRYTFTMMPDGADKGYAFPTISAGNFAFVKKKTIELEQEKQIWDELKFDSLTGRLVKKCSNKDANLAQYRDVEKKKATETIDYSPCTRSSDGKTHGYKDYRDNTYMTLQVQSGFSPRTLDKSQTLNELLNELSGSLPKNAEQLQKDIEKLTESYYQATTLDNLKAPLSSMALYSAKNKQSLLDQFEISAHIFENSLAQVISDKSCDAEKDPCPYMLTNEQILNVISHARLLLTKLGYKGSLDAVLPLDFKLEAYTNKTVGNTIASTLISAYKKHEQTRHYQTLSTILRDIHHTVAKLIQLAQSEKPELDSTSVVNAGVKLLAFLEALLDEQQKVKLTQCSIKPDQKVCQHLLTQTQLKAINLEMFHFLDTLKASPQQCNSNGVNLAQQRLAAFIVSNFISITQAQATTSTKAQLGQLIRTQLNALTEQQLGADKSTLVNLITSNLNTMSKEQLQALNKTSLVPLSIIDADNIVVFMHCLLTPKES
>NZ_AP021846.1|WP_152086753.1|2952429_2954109_+|hemolysin-D
MKKLSLCLTLAISTAPSLAFTQLGGSGAMPMGHEWLTRTAALELLDAEHIIAPDPNDPRLTWQSGLAKNTDLNGAYSEVSEFISTPNNNKNYQPRFDNVYAAIVGERWVDIAGFNVTNASADPTGPNCFSAVSQEPADLQQDHFMRRYDDIGGQGGVDAARRAQQRFVNHFVDAAMAENKRIKVWDGGGYSALAEVDHNYFLFGRAVHLFQDSFSPEHTVRLPTDNYEKVWQVKAYLCSEGAEQHSHDTKDILNFTSGDVIWKTHTRLESGWDSYKVSSMKPVALVALEASKDLWAGFIRTMATHREEREAVAKAEAQRLVDNWLSFDEQAMLNWYDNQQHRDHTYVLAPNESGVGKTLNECMLELNVGTTSQTQRVAELEAQRRQCLYNIEAEPGYEDLYDPHMSMPYNWRWKSLTWQTPPSDWQASKQPADKGQTITFKSALNAQSVKSNGALQDGAKLITAHGEALEFIKVPTQDGAFYLRSKHQPELFFSYSASSSGYAKLVNSPRQAAYRLIYQGGVWNIKNTHWQQYFWADDSNIYLNRHGDPQRTSAKWIIE
>NZ_AP021846.1|WP_152086752.1|2951577_2951967_+|hypothetical-protein
MSNTSQKKAFSYSVDIYHNLGYILVVAQGCGSKSDIKNMYQTIGKAAKIAKIDKLILNGTQLTLDYSGSDVIKVLKMIARLFNHFYIARVITPADFKSDLIDVFAQRHALNIKSFFNEHDAYEWLITQS
>NZ_AP021846.1|WP_152086751.1|2949254_2951240_-|S8-family-serine-peptidase
MNKQFALSALAISLLATSSMSATASDSKTYIVKRNNLKAIAQSTLAGADNIQRVLQDNKLDTLSKTSFAEVSTITLNQQQVEMLKRSGQFDYIEEDFEYEMLSNAQVSPYGIAQVQANLLSDANADLLKVCIIDSGYDLGHPDLPQNATGFADAEVGVWYRDGSGHGTHVAGTVAAVNNSEGVVGVLPSDKVAIHAVRVFDDNGKKGYNSRIGRAVDNCVENGANVINMSLGGAGKSQYLEERLNAAYDKGVLLIAAAGNGGDSSLSYPASYDNVMSVANIDEQRQKNESSQYNAQVEISAPGTEVLSTVPRGTGIVASISGLGQAFEASGMTHSVEGNVTASLVDCEQGLAQCTAPASICLIERGGASFADKAKNCQAGGGVAAVIYNNVATSFSGTLGDANHGVTIPVLGMSGDAGAALKGLLKQQVNVQLEAISDYDKKSGTSMASPHVAGVAALVWSNHTQCSNVEIRQALTATAIDLGDAGRDHKFGYGLVQAKAASDYLTANGCGGGSKNQLPQAAFSVSCEALSCQFDAGTSVDPDGQITAYEWRVDGQAYSGAVAAHVFSQAGSYQVSLTVTDNLSATANAAKTITVSDDSTGGDCQGIAPWSATQVYTSRGTLVSYQGKKYRNNWWNINKNPAQHSNVGNSWKVWTDLGVCN
>NZ_AP021846.1|WP_152086750.1|2948457_2948970_+|TIGR00645-family-protein
MREKIETNFERMIYAGRWLLAPLFAGLFVAIILLLIKFFKLLGVMVLNTLNATNGQMLINILTLVDTALLAGLLIIIIFSGYETFVSKLNINQHEDRPSWMGKVGFSGLKIKLISAIVAISTIELLKVFIDWRSYTEDQLFWKVAIHMTFVVSGILFSITDFINSKTQHH
>NZ_AP021846.1|WP_152086749.1|2947012_2948293_+|amidohydrolase-family-protein
MKNALLNSLTSLLFICGYAHGQTTIINAKAYIDVETGKKFTNPSLLIEDNRIVRVAKQGDIKSPQGATIIDLSDKTLLPGLMDMHVHLTSDPADNFLAAQNYSIPRKTVKAVKNAHTTLMAGFTTVRNLGAPGYSVIATRDAINAGEIDGPRIYSAGYSISITGGHCDDNFSAPEKKAVSGGVADGPWAVRAKVRENIKYGANTIKICATGGVFSKGTKVGVQQFSEQELKAAAEEAHLRGLIIAAHAHGTNGIKAAIRAGIDSIEHCSFMDDEAIALAKQHGTYLSCDIYNTEYTLAFGEANGVPEENINKEKQVSTAQRESFRRAVKAGLNMVFGSDAAIYPHGDNAKQFSRMVQFGMTPLQAIQSATINSAALLKNPEIGKISEGYLADIIAVDDDPLNKINTLENVRFVMKDGKVLKYTTQN
>NZ_AP021846.1|WP_152086748.1|2946298_2946886_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKNIPEQIPRTSGALPRMLGMLVLKVLGWRIDGTFPAQRKFVAAVAPHTSNWDFFIAIAVKLSLGVKIKFLGKHSIFIGPLGWLLKKLGGIPVERSHNHGIVEQVSDAFKQSDSLILGIAPEGTRKKTSRWKSGFIYIAKSANVPIVPMALDYRTKTFVIMPPCYIKHDIDIELNNIIALFDKEMAKYPEQVSGN
>NZ_AP021846.1|WP_152086758.1|2960658_2961767_+|IS3-family-transposase
MKKSRFTESQIIAVLKETDAGMKVEEVCRKHGISSATYYNWKAKYGGMEASDVKRLKELEEENAKLKKMYADVSLENHAIKEFIRKKGLVTAQKRSCASILVQAGISILKACKFVGIGRATYYRPERDWRKADAAVIDAINAGLKKSPRAGFWKCYGRLRFKGYPFNHKRVYRVYCQMGLNLKRRVKRVLPKRVAQPLDVVAQANHQWALDFMHDSLYCGKRFRTLNIVDEGTRECLAVEVDTSLPAERVVRTLEQLKAERGLPKQIRVDNGPELISARLTDWCEAHNIKLVYIQPGKPQQNGFVERFNGSFRREFLDAYLFESINQVKEMVWFWRLDYNEERTHESLGDLPPAAYRAKLENSSLQVSH
>NZ_AP021846.1|WP_172971616.1|2961808_2961982_+|hypothetical-protein
MPINNAKPAPKAENAPAFPEFSSIEPSKPAAISIAPTNATQLSAKNVRYSSLTIRAL
>NZ_AP021846.1|WP_152085814.1|2962477_2963632_+|IS110-family-transposase
MTKHNILFIGLDTHKEFIEVAYIEDNRGAQPIHFGRISSAKVAIKKLIRQFESKYPNATLHFVYEAGPCGYWIYRLITSLGHCCYVVAPSLIPKKPGERVKTDKRDALKLAKLLKSEDLTPIYVPEPEDEAIRDLSRAREVAMKDLKDAKYQLKALLLRNNINYAGTANWSLKHLRWLTELVLPHPAQQIVLQEFIQTINERTARLERLDNELSHHVCQWRYYPVVKAIQAMRGVRLLVAAGVVAELGDLTRFDHPRKLMSYLGLVPSEHSSGGKRHIGAITRCGNGRARRLLVEGAHSYRHAANISTELQKRQEGLPKQIVDIAWKAQLRLCKRYKKLINKGKHYNLVVTAIAREMIAYIWAIAKQIVLSPINHKLRLSRVPA
>NZ_AP021846.1|WP_152086759.1|2964020_2964353_-|hypothetical-protein
MGICLLATISEIFNYSDKVEVSNIIESKEFKQVQGCISNYEKQTPKHGTLIESFSIDDVEFTFSNYDVGPYFHGKLHKDNFIKNGQCVSIDYVLDGRKNKILKIVQLTKP
>NZ_AP021846.1|WP_152086760.1|2964631_2965048_-|hypothetical-protein
MSGTKKLGLVRTSPIIVKHFVPHMRALYAKEAQLPTHHLVPKCGWKDYSKNVSVSEFIFDELIPLVNSGKMDYENFIVGSGEFSNDSGYCSMEFVVPLYDEDIEELSKLQISYDSKTDNIFALLDTKLRSKFELIETL
>NZ_AP021846.1|WP_152086761.1|2965058_2965406_-|hypothetical-protein
MNLVGSKTEKDIEAELVALTSSTFTNSKAYYLRQLLSELGINPQEVIVLRGFPDETSEVYLLLIENRLIGQVEIDSDDLENPTIETFTLPEYKQGLSKIQQIRLAVAKMLLSSKT
>NZ_AP021846.1|WP_152086762.1|2965531_2965753_-|hypothetical-protein
MSKSTADLVRIAAAGGGMTLSSGKSTADLVRICAAASGKGAQITIVGANSKSTADLVRIAAAGQGCVTFDLSA
>NZ_AP021846.1|WP_152086763.1|2965840_2966764_-|hypothetical-protein
MENIGSIAITAFITLLVTVLAGVLLEYFKRVRPKLKYSIKESIPIDLDDKKIGANIIEISNPSAKTVKDIVVKLRARGSEIKNGGVKTVTGMDYEVIESEDTLEIKIPFLKFKDYLSITLILEGKYSIPNKPEITVRSPDNFKLIEEGEKADKGYFSIASGIVTPAIMAAVTVSLALTTNVLSSRSEQGVNLAIAAAVVGLPEIAQYYVSNDKIYYYNQGPFIYSMAKSEVDKTKIPKYGDFLEKTLKVAPRINSNSEAALQFFIAKIRSLEKNDSLANDWFIKSEKTDKAEYNQLVEYFKSESPNN
>NZ_AP021846.1|WP_152086764.1|2966885_2967410_-|hypothetical-protein
MNIELLNTSIDSFIKFLNQNFSLVSRAYELHKLETEQSGEFLVPFTDFFDDWAQANWELLVERTVCSSQESLTIYGNGSDYEAAEYSRVFFHKATATHEVICTAENAIDWITGEIVDLSKFEFDSFVSVSNDWFEVVAPFDHILMSEKVAAGAGYQQIVIPRNQVKFIAQAIEI
>NZ_AP021846.1|WP_152086765.1|2968221_2969097_-|LysR-family-transcriptional-regulator
MSMYNWDDVRFFLEVARCGSVSLAATKLNVNHTTVARRIQAFEKEQGVTLFERSNTGYQISSAGNDIIEIAKELEQKNQQIARLLQGRDQQLSGEITITLPHDLYEMCLAKPLAKFQRDYPNIILNFIVSKGVKNLAAREADIAVRFTPAPPEYLIGREVAKLNNGIYRGEVETCGYTPIVCWSNEVTPPIWATEHLHNPRIVARFDDLYGMYKAVEANVGYARLPHYVVRSHPHTHVQKLDAQLPESKWGIWVLSHADLRDTARVKVCKDYLYKVLMKTKATFDGQISEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	336758-336794	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	429236-429272	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	259892-259928	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	294625-294661	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	480746-480782	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021847.1	540898-540934	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	513252-513288	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	795829-795865	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1933451-1933487	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2755725-2755761	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2832179-2832215	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2834703-2834739	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3034523-3034559	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3047618-3047654	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3057661-3057697	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3086193-3086229	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3313989-3314025	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3463809-3463845	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3544350-3544386	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3572590-3572626	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	3837194-3837230	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	282330-282366	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	350555-350591	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1192078-1192114	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1211205-1211241	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1317409-1317445	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1712620-1712656	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2362296-2362332	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2523316-2523352	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2638203-2638239	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2716013-2716049	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2795745-2795781	0	1.0
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	147508-147544	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1065198-1065234	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2607964-2608000	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	1496975-1497011	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2018479-2018515	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2061843-2061879	1	0.973
NZ_AP021846_6	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	NZ_AP021846.1	2760145-2760181	1	0.973

1. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 336758-336794, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

2. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 429236-429272, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

3. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 259892-259928, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgaccaatgtattaataaaattggta	Protospacer
**************.**********************

4. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 294625-294661, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcactgtattaataaaattggta	Protospacer
***************** *******************

5. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 480746-480782, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gcgcgctagaatgatcaatgtattaataaaattggta	Protospacer
** **********************************

6. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 540898-540934, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatggattaataaaattggta	Protospacer
******************** ****************

7. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 513252-513288, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

8. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 795829-795865, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

9. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1933451-1933487, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

10. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2755725-2755761, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

11. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2832179-2832215, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

12. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2834703-2834739, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

13. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3034523-3034559, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

14. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3047618-3047654, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

15. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3057661-3057697, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

16. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3086193-3086229, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

17. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3313989-3314025, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

18. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3463809-3463845, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

19. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3544350-3544386, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

20. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3572590-3572626, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

21. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 3837194-3837230, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

22. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 282330-282366, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

23. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 350555-350591, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

24. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1192078-1192114, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

25. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1211205-1211241, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

26. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1317409-1317445, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

27. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1712620-1712656, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

28. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2362296-2362332, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

29. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2523316-2523352, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

30. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2638203-2638239, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

31. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2716013-2716049, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

32. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2795745-2795781, mismatch: 0, identity: 1.0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

33. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 147508-147544, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaagttggta	Protospacer
******************************.******

34. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1065198-1065234, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatctatgtattaataaaattggta	Protospacer
**************** ********************

35. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2607964-2608000, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gcccgctagaatgatcaatgtattaataaaattggta	Protospacer
**.**********************************

36. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 1496975-1497011, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatctatgtattaataaaattggta	Protospacer
**************** ********************

37. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2018479-2018515, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctagctagaatgatcaatgtattaataaaattggta	Protospacer
*** *********************************

38. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2061843-2061879, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgagcaatgtattaataaaattggta	Protospacer
************** **********************

39. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to position: 2760145-2760181, mismatch: 1, identity: 0.973

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgatagaatgatcaatgtattaataaaattggta	Protospacer
***** *******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1701030 : 1752930

Lake_Baikal_phage(10.0%)

protease,transposase,integrase,tRNA

attL 1732743:1732757|attR 1742817:1742831

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152085778.1\|1701030_1702131_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_152085779.1\|1702216_1702855_-	pseudouridine synthase	NA	NA	NA	NA
WP_152085780.1\|1703005_1705033_+	TonB-dependent receptor	NA	NA	NA	NA
WP_152085781.1\|1705101_1707327_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_152085782.1\|1707598_1707817_-	cold shock domain-containing protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.5e-15	58.2
WP_152085783.1\|1708015_1708333_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	6.9e-14	39.3
WP_152085784.1\|1708362_1710627_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.7e-162	40.6
WP_058029687.1\|1710780_1710999_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_152085785.1\|1711162_1711879_-	arginyltransferase	NA	NA	NA	NA
WP_152085786.1\|1711871_1712588_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_152085787.1\|1712845_1713799_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.5e-61	42.2
WP_152085788.1\|1714053_1715379_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_152085789.1\|1715456_1717124_-	asparagine synthase B	A9YVS6	Ostreococcus_tauri_virus	3.9e-92	41.4
WP_152085790.1\|1717499_1718162_-	pyroglutamyl-peptidase I	NA	NA	NA	NA
WP_172971570.1\|1718154_1719174_-	DUF979 domain-containing protein	NA	NA	NA	NA
WP_152085791.1\|1719170_1719899_-	DUF969 family protein	NA	NA	NA	NA
WP_152085792.1\|1719908_1720838_-	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
WP_152085793.1\|1720831_1721488_-	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
WP_152085794.1\|1721591_1723106_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.2e-44	37.2
WP_152085795.1\|1723270_1724548_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_152085796.1\|1724627_1725287_-	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA
WP_152085797.1\|1725297_1725996_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_152085798.1\|1726068_1726971_-	hydroxymethylglutaryl-CoA lyase	A0A1V0SKU2	Klosneuvirus	1.1e-51	40.7
WP_152085799.1\|1726972_1728925_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_152085800.1\|1728937_1729720_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_152085801.1\|1729732_1731340_-	methylcrotonoyl-CoA carboxylase	A0A1B2ITV7	Pike_perch_iridovirus	1.3e-20	69.4
WP_152085802.1\|1731350_1732526_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_152085803.1\|1732546_1732942_-	MerR family transcriptional regulator	NA	NA	NA	NA
1732743:1732757	attL	NA	NA	NA	NA
WP_152085804.1\|1733263_1734442_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_152085805.1\|1734530_1736021_+	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_152085806.1\|1736106_1737264_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_152085807.1\|1737274_1738051_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_152085808.1\|1738050_1739190_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_152085809.1\|1739200_1740088_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
WP_152085810.1\|1740092_1740854_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_152085811.1\|1740907_1741864_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	3.4e-56	39.6
WP_152085812.1\|1742208_1742577_+	hypothetical protein	NA	NA	NA	NA
WP_152085813.1\|1742691_1743345_+	hypothetical protein	NA	NA	NA	NA
1742817:1742831	attR	NA	NA	NA	NA
WP_152085814.1\|1743743_1744898_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_152085815.1\|1745016_1745295_+	hypothetical protein	NA	NA	NA	NA
WP_152085816.1\|1745426_1745945_+	hypothetical protein	NA	NA	NA	NA
WP_152085814.1\|1746355_1747510_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_152085817.1\|1747633_1747951_+	hypothetical protein	NA	NA	NA	NA
WP_152085818.1\|1748057_1748450_+	hypothetical protein	NA	NA	NA	NA
WP_152085819.1\|1748546_1748894_+	hypothetical protein	NA	NA	NA	NA
WP_152085820.1\|1749031_1749565_+	hypothetical protein	NA	NA	NA	NA
WP_152085821.1\|1749662_1750067_+	hypothetical protein	NA	NA	NA	NA
WP_152085822.1\|1750174_1751077_+	hypothetical protein	NA	NA	NA	NA
WP_152085823.1\|1751175_1751826_+	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_152085824.1\|1751782_1752930_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.0e-83	53.0

DBSCAN-SWA_2

2241636 : 2343974

Vibrio_phage(23.68%)

transposase,plate,tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152086181.1\|2241636_2243547_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.9e-127	37.1
WP_152086182.1\|2243802_2244807_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_152086183.1\|2244870_2245317_+	DUF3010 family protein	NA	NA	NA	NA
WP_152086184.1\|2245341_2245890_-	hypothetical protein	NA	NA	NA	NA
WP_152086185.1\|2245939_2246182_-	DUF2164 family protein	NA	NA	NA	NA
WP_152086186.1\|2246171_2246480_-	hypothetical protein	NA	NA	NA	NA
WP_152086187.1\|2246567_2248421_-	phosphotransferase	NA	NA	NA	NA
WP_152086188.1\|2248476_2250141_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	5.6e-248	73.8
WP_152086189.1\|2250371_2251445_+	DUF3083 family protein	NA	NA	NA	NA
WP_152086190.1\|2251457_2255099_-	PAS domain-containing protein	NA	NA	NA	NA
WP_152086191.1\|2255217_2257077_-	metallophosphatase	NA	NA	NA	NA
WP_152086192.1\|2257063_2257855_-	YchF/TatD family DNA exonuclease	NA	NA	NA	NA
WP_152086193.1\|2257863_2258190_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_152086194.1\|2258198_2259098_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_152086195.1\|2259097_2259727_-	dTMP kinase	A0A1L2BX49	Bacteriophage	2.3e-32	43.3
WP_152086196.1\|2259716_2260706_-	endolytic transglycosylase MltG	NA	NA	NA	NA
WP_152086197.1\|2260702_2261488_-	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_152086198.1\|2261546_2262785_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_070985135.1\|2262867_2263104_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	9.1e-11	46.6
WP_152086199.1\|2263323_2264070_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	3.2e-17	36.0
WP_152086200.1\|2264089_2265016_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_152086201.1\|2265069_2266122_-	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_070985127.1\|2266133_2266304_-	50S ribosomal protein L32	NA	NA	NA	NA
WP_152086202.1\|2266314_2266839_-	23S rRNA accumulation protein YceD	NA	NA	NA	NA
WP_152086203.1\|2266958_2267558_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_152086204.1\|2267507_2268179_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_152086205.1\|2268188_2269142_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA
WP_152086206.1\|2269656_2272983_+	ribonuclease E	NA	NA	NA	NA
WP_152086207.1\|2273686_2276563_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.2e-24	37.8
WP_152086208.1\|2276863_2278213_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_152086209.1\|2278333_2278912_-	LPP20 family lipoprotein	NA	NA	NA	NA
WP_152086210.1\|2279100_2280819_+	hypothetical protein	NA	NA	NA	NA
WP_152086211.1\|2280823_2281438_+	penicillin-binding protein activator LpoB	NA	NA	NA	NA
WP_152086212.1\|2281427_2282408_+	LPP20 family lipoprotein	NA	NA	NA	NA
WP_152086213.1\|2282469_2283483_-	nucleoid-associated protein YejK	A0A1V0E8C0	Vibrio_phage	1.1e-68	41.9
WP_152086214.1\|2283548_2283761_+	DUF1414 domain-containing protein	NA	NA	NA	NA
WP_152086215.1\|2283765_2285262_+	DUF3413 domain-containing protein	NA	NA	NA	NA
WP_152086216.1\|2285321_2285795_+	DUF4124 domain-containing protein	NA	NA	NA	NA
WP_152086217.1\|2285855_2287598_+	bifunctional isocitrate dehydrogenase kinase/phosphatase	NA	NA	NA	NA
WP_152086218.1\|2287587_2288526_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_152086219.1\|2288743_2289703_-	hypothetical protein	NA	NA	NA	NA
WP_152086220.1\|2289815_2290169_+\|transposase	transposase	NA	NA	NA	NA
WP_152086221.1\|2290348_2291392_-\|tail	phage tail protein	A0A2H4JAV0	uncultured_Caudovirales_phage	1.2e-22	27.0
WP_152086222.1\|2291402_2291618_-\|tail	tail protein X	A0A2H4J946	uncultured_Caudovirales_phage	2.4e-10	44.4
WP_152086223.1\|2291630_2292077_-\|tail	phage tail protein	A0A193GYE0	Enterobacter_phage	3.8e-18	35.4
WP_152086224.1\|2292076_2295529_-	hypothetical protein	NA	NA	NA	NA
WP_152086225.1\|2295879_2296137_-\|tail	phage tail assembly protein	Q75QK8	Wolbachia_phage	1.2e-11	44.0
WP_152086226.1\|2296143_2296653_-\|tail	phage major tail tube protein	A0A1B2LRS4	Wolbachia_phage	1.8e-32	45.2
WP_172971650.1\|2296652_2297774_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A1B2LRR3	Wolbachia_phage	8.5e-107	57.3
WP_152086228.1\|2298132_2298468_-	GPW/gp25 family protein	D4HTV2	Vibrio_phage	1.8e-28	52.3
WP_152086229.1\|2298483_2298783_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_152086230.1\|2298786_2299497_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	6.7e-25	42.2
WP_152086231.1\|2299486_2300095_-	hypothetical protein	NA	NA	NA	NA
WP_152086232.1\|2300191_2300545_-	hypothetical protein	NA	NA	NA	NA
WP_152086233.1\|2300553_2301288_-	hypothetical protein	NA	NA	NA	NA
WP_152086234.1\|2301301_2301862_-\|tail	phage tail protein	K7RVY3	Vibrio_phage	2.3e-44	53.3
WP_152086235.1\|2301861_2302803_-\|tail	phage tail protein I	K7R2P6	Vibrio_phage	2.3e-44	51.4
WP_152086236.1\|2302803_2303694_-\|plate	baseplate J/gp47 family protein	D4HTV3	Vibrio_phage	1.1e-64	43.8
WP_152086237.1\|2304510_2305038_-	hypothetical protein	NA	NA	NA	NA
WP_152086238.1\|2305049_2306429_-	hypothetical protein	NA	NA	NA	NA
WP_152086239.1\|2306438_2306756_-	hypothetical protein	NA	NA	NA	NA
WP_152086240.1\|2306765_2308001_-	hypothetical protein	A0A1B2LRR4	Wolbachia_phage	6.1e-66	40.3
WP_152086241.1\|2308000_2310022_-	DUF4815 domain-containing protein	K4ICQ5	Acidithiobacillus_phage	2.7e-119	40.1
WP_152086242.1\|2310031_2310517_-	hypothetical protein	NA	NA	NA	NA
WP_152086243.1\|2310695_2311472_-	hypothetical protein	NA	NA	NA	NA
WP_152086244.1\|2311481_2314697_-	hypothetical protein	A0A2I7R0J0	Vibrio_phage	3.9e-104	31.5
WP_152086245.1\|2315000_2318240_-	hypothetical protein	A0A2I7R0J0	Vibrio_phage	2.7e-121	31.8
WP_152086246.1\|2318249_2318810_-	hypothetical protein	A2I2X8	Vibrio_virus	2.1e-29	42.5
WP_152086247.1\|2318896_2319835_-\|tail	phage tail protein	K4I1F8	Acidithiobacillus_phage	1.9e-35	37.8
WP_152086248.1\|2319837_2320743_-\|plate	baseplate J/gp47 family protein	K4HZB7	Acidithiobacillus_phage	1.4e-43	41.2
WP_152086249.1\|2320969_2321515_-	hypothetical protein	NA	NA	NA	NA
WP_152086250.1\|2321507_2321843_-	hypothetical protein	NA	NA	NA	NA
WP_152086251.1\|2321842_2326087_-\|tail	phage tail protein	A0A0A7RTP0	Clostridium_phage	4.8e-17	36.2
WP_152086252.1\|2326103_2326640_-\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	8.9e-22	38.5
WP_152086253.1\|2326636_2327542_-\|plate	baseplate J/gp47 family protein	D4HTV3	Vibrio_phage	5.0e-49	37.0
WP_152086254.1\|2327558_2328263_-	hypothetical protein	NA	NA	NA	NA
WP_152086255.1\|2328505_2329198_-	hypothetical protein	NA	NA	NA	NA
WP_152086256.1\|2329207_2332141_-	hypothetical protein	A0A2I7R0J0	Vibrio_phage	1.0e-103	35.6
WP_152086257.1\|2332137_2332680_-\|tail	phage tail protein	A2I2X8	Vibrio_virus	2.2e-20	35.2
WP_172971592.1\|2332676_2333504_-\|tail	phage tail protein I	V9IQK7	Stenotrophomonas_phage	2.1e-25	36.5
WP_152086259.1\|2333496_2334498_-\|plate	baseplate J/gp47 family protein	A0A193GYM8	Enterobacter_phage	4.7e-56	36.5
WP_152086260.1\|2334609_2335071_-	hypothetical protein	NA	NA	NA	NA
WP_152086261.1\|2335082_2335853_-	hypothetical protein	NA	NA	NA	NA
WP_152086262.1\|2335949_2336255_-	hypothetical protein	NA	NA	NA	NA
WP_152086263.1\|2336257_2337136_-	hypothetical protein	NA	NA	NA	NA
WP_152086264.1\|2337220_2337532_-	hypothetical protein	NA	NA	NA	NA
WP_172971593.1\|2337568_2338093_-\|tail	phage tail protein	B0ZSG1	Halomonas_phage	2.5e-24	41.0
WP_152086266.1\|2338219_2339119_-\|tail	phage tail protein I	A0A0F7LA36	Escherichia_phage	7.0e-27	37.0
WP_152086267.1\|2339128_2339953_-\|plate	baseplate J/gp47 family protein	S4TNY7	Salmonella_phage	1.6e-41	38.6
WP_152086268.1\|2340053_2340302_-	hypothetical protein	NA	NA	NA	NA
WP_172971651.1\|2340298_2340697_-	hypothetical protein	A0A1B1ITB4	uncultured_Mediterranean_phage	1.1e-19	40.2
WP_152086270.1\|2340696_2341113_-	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	5.0e-28	53.4
WP_152086271.1\|2341122_2341494_-	hypothetical protein	NA	NA	NA	NA
WP_172971594.1\|2341471_2341747_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_152086272.1\|2342309_2343974_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	8.3e-42	26.7

DBSCAN-SWA_3

3260787 : 3268412

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087005.1\|3260787_3261837_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	7.2e-116	61.3
WP_152087006.1\|3261902_3262394_-	nicotinamide-nucleotide amidohydrolase family protein	B5TK85	Pseudomonas_phage	4.6e-25	45.8
WP_152087007.1\|3262416_3264996_+	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	6.0e-31	24.3
WP_152087008.1\|3265068_3266046_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.1e-33	32.8
WP_152087009.1\|3266102_3266930_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_152087010.1\|3267021_3267660_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	8.4e-35	49.4
WP_152087011.1\|3267662_3268412_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-68	51.8

Anti-CRISPR protein detection

Acr_ID: NZ_AP021846.1|WP_152085803.1|1732546_1732942_-|MerR-family-transcriptional-regulator

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_AP021846.1|WP_152085803.1|1732546_1732942_-|MerR-family-transcriptional-regulator

1732546_1732942_-

131 aa aa

1701030-1752930

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_AP021846_6	Orphan	6.1\|2943413\|37\|NZ_AP021846\|CRISPRCasFinder	2943413-2943449	37	1712656-1712620	0

1. spacer 6.1|2943413|37|NZ_AP021846|CRISPRCasFinder matches to NZ_AP021846 position: 1712656-1712620, mismatch: 0

gctcgctagaatgatcaatgtattaataaaattggta	CRISPR spacer
gctcgctagaatgatcaatgtattaataaaattggta	Protospacer
*************************************

2. NZ_AP021847

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP021847_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021847_1

161764-161838

Unclear

Consensus_repeat	Method
AAATAAAAGTGGGTGTCTTATTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP021847_1

>merge|NZ_AP021847|1|161764-161838|CRISPRCasFinder
AAATAAAAGTGGGTGTCTTATTTAATTCTTGGCAATGAATAAAAAATATACAAATAAAAGTGGGTGTCTTGTTTA

>NZ_AP021847|1|1|161764-161838|CRISPRCasFinder
AAATAAAAGTGGGTGTCTTATTTA	ATTCTTGGCAATGAATAAAAAATATAC
AAATAAAAGTGGGTGTCTTGTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021847.1\|WP_152087757.1\|171943_172540_+\|membrane-integrity-associated-transporter-subunit-PqiC	unknown	unknown	gnl\|CDD\|225554
NZ_AP021847.1\|WP_152087742.1\|152713_153532_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|274527
NZ_AP021847.1\|WP_152087745.1\|157322_158159_-\|ion-transporter	unknown	unknown	gnl\|CDD\|366146
NZ_AP021847.1\|WP_152087739.1\|149267_149660_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377821
NZ_AP021847.1\|WP_152087754.1\|168205_169006_+\|thioesterase-family-protein	unknown	unknown	gnl\|CDD\|379298
NZ_AP021847.1\|WP_152087740.1\|149803_150862_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380547
NZ_AP021847.1\|WP_152087755.1\|169086_170295_+\|PqiA/YebS-family-transporter-subunit	unknown	unknown	gnl\|CDD\|225542
NZ_AP021847.1\|WP_152087748.1\|160485_161460_-\|transposase	unknown	unknown	unknown
NZ_AP021847.1\|WP_152087746.1\|158577_159426_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_AP021847.1\|WP_152087743.1\|153534_154479_-\|kinase	unknown	unknown	gnl\|CDD\|270690
NZ_AP021847.1\|WP_152087753.1\|166061_167987_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_AP021847.1\|WP_152087741.1\|151061_152678_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173803
NZ_AP021847.1\|WP_152087750.1\|162958_163936_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_AP021847.1\|WP_152087751.1\|163954_164413_-\|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl\|CDD\|237976
NZ_AP021847.1\|WP_152087747.1\|159487_160039_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	unknown	unknown	gnl\|CDD\|182092
NZ_AP021847.1\|WP_152087752.1\|164798_165932_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_AP021847.1\|WP_152087756.1\|170287_171943_+\|intermembrane-transport-protein-PqiB	unknown	unknown	gnl\|CDD\|182747
NZ_AP021847.1\|WP_152087749.1\|162424_162955_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021847.1\|WP_152087744.1\|154613_156863_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
NZ_AP021847.1\|WP_152087758.1\|172547_173051_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112

Protein	Function_ID	Function_description	E-value
NZ_AP021847.1\|WP_152087757.1\|171943_172540_+\|membrane-integrity-associated-transporter-subunit-PqiC	gnl\|CDD\|225554	COG3009, COG3009, Uncharacterized protein conserved in bacteria [Function unknown].	5.67185e-23
NZ_AP021847.1\|WP_152087742.1\|152713_153532_-\|EamA-family-transporter	gnl\|CDD\|274527	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.	9.84101e-06
NZ_AP021847.1\|WP_152087745.1\|157322_158159_-\|ion-transporter	gnl\|CDD\|366146	pfam00520, Ion_trans, Ion transport protein. This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.	7.40463e-37
NZ_AP021847.1\|WP_152087739.1\|149267_149660_-\|hypothetical-protein	gnl\|CDD\|377821	pfam07361, Cytochrom_B562, Cytochrome b562. This family contains the bacterial cytochrome b562. This forms a four-helix bundle that non-covalently binds a single heme prosthetic group..	4.37643e-17
NZ_AP021847.1\|WP_152087754.1\|168205_169006_+\|thioesterase-family-protein	gnl\|CDD\|379298	pfam13622, 4HBT_3, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	3.75467e-49
NZ_AP021847.1\|WP_152087740.1\|149803_150862_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380547	cd06324, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	2.75311e-91
NZ_AP021847.1\|WP_152087755.1\|169086_170295_+\|PqiA/YebS-family-transporter-subunit	gnl\|CDD\|225542	COG2995, PqiA, Uncharacterized paraquat-inducible protein A [Function unknown].	4.37626e-91
NZ_AP021847.1\|WP_152087746.1\|158577_159426_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	6.61239e-23
NZ_AP021847.1\|WP_152087743.1\|153534_154479_-\|kinase	gnl\|CDD\|270690	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase and Choline Kinase family. This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	0.0014275
NZ_AP021847.1\|WP_152087753.1\|166061_167987_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_AP021847.1\|WP_152087741.1\|151061_152678_+\|S8-family-serine-peptidase	gnl\|CDD\|173803	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins. This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.18427e-104
NZ_AP021847.1\|WP_152087750.1\|162958_163936_-\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	4.59118e-10
NZ_AP021847.1\|WP_152087751.1\|163954_164413_-\|Cys-tRNA(Pro)-deacylase	gnl\|CDD\|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	3.73173e-66
NZ_AP021847.1\|WP_152087747.1\|159487_160039_+\|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein	gnl\|CDD\|182092	PRK09818, PRK09818, kinase inhibitor.	7.03827e-67
NZ_AP021847.1\|WP_152087752.1\|164798_165932_-\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_AP021847.1\|WP_152087756.1\|170287_171943_+\|intermembrane-transport-protein-PqiB	gnl\|CDD\|182747	PRK10807, PRK10807, intermembrane transport protein PqiB.	1.79875e-138
NZ_AP021847.1\|WP_152087744.1\|154613_156863_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_AP021847.1\|WP_152087758.1\|172547_173051_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.04633e-27

>NZ_AP021847.1|WP_152087748.1|160485_161460_-|transposase
MATARKRQVSLVDTKYYHCISRCVRRAFLCGDDTITGKSYEHRRQWVEDKLLALAKVFCIDVCAYAVMSNHTHIVLYVDDKKAKRLSDKAILIRWHKLFKGTLLTQKYLQGDKLDKAQQFFLNRTIADYRERLADISWFMRVLNEDIARKANKEDNCTGRFWEGRFKSQALLDEAAVAACMAYVDLNPIRAKMAKTPEESEHTSVHKRIKAAKDAKQPKQLARFAGSPRKHMPKGLPFELKSYLELVELTGRCMREDKRGYIEQRTLPILERLNIAPENWLKLTTQFTKVFKGAVGRPNKLDGYYTHLEIKRRTGISHCEQLFG
>NZ_AP021847.1|WP_152087747.1|159487_160039_+|YbhB/YbcL-family-Raf-kinase-inhibitor-like-protein
MKIIANHLLAISMIAPFTSLALTLTSQDIAPGEFMSKKHEFKGFGCNGDNLSPHLAWQDVPKGTKSFAITAYDPDAPTGSGWWHWQVVDIPVSINELKTGLGINAQSKLPDGAKQISNDYGVESFGGACPPKGHGVHRYQFTIHALSVEKLSLPKSPSSALVGYMINANSLRSATVEALYQRD
>NZ_AP021847.1|WP_152087746.1|158577_159426_+|helix-turn-helix-domain-containing-protein
MQALINSINSITSKDVDLPFSVYCAFHEQRLLDVPITKPTLIIVMNGSKLLGKQGNIRCNAGEFVFLSDSPKLDMRNIPNDDIYQALLIEFDANDFSIFERLQIETEQQNIIPKHYSASVSEELLACITQFVDSVPWANGDIIKHRKQEILLLLHALGFEHIPLMAHNVSLSNQIFGMLKNNDFQALRLDQLCGLLAISESTLRRKLQAEDMTLQQIKDKARLGHGLHLLQTTSKPIGDVASLSGYTSQSRFTQKFKNHFGMTPSELRSTKLKDMGENLTAF
>NZ_AP021847.1|WP_152087745.1|157322_158159_-|ion-transporter
MYENIKSKLNTLKNNKAFELSVVAVIIISALEIGAKTFPLSSGAISVTHVLDVFITLFFLFEISVRFIADEDKKRFFKKGWNIFDTLVVVISLIPVNDSEMALLARLVRVFRVLRMVSVVPELRVLINSLIKAMPQLGYVILLMFIIFYIYAAIGSFVFKDINPKLWGDIAISMLTLFRIMTFEDWTDIQYETMEVYPMSWVFYLTFIFFTAFAFLNMVIGIVVNVMEDERSKMKKAKEDAKNVPTIEDLHSEIQQLKALIVQQQQSIKQTADKESTN
>NZ_AP021847.1|WP_152087744.1|154613_156863_-|acyl-CoA-dehydrogenase
MSLRTQLKKVLPSISVTEQEALDAGDVWLEGSIYRGKPDFDALRAVPEAKLTAEEQAFLDGPVKELMAMIDDSVIQNSKHLPDHILEFLKTERFFSLIIPKSFGGLEFSPYANSTIVGTIATKSSAVAVTVMVPNSLGPGELLLHYGTQEQQAHYLPRLANGREIPCFALTSPEAGSDAGGIPDIGIVKKGQYNGEEVLGLEVTWDKRYITLAPIATVLGLAFKVEDPDGLLGGKEHLGITCALIPKSHPGVELGNRHDPMGIRFYNGTTRGEKVFIPMDFIIGGQKNIGRGWQMLVSCLGAGRGISLPALGVSTSQVALKSASEYAAVREQFGLSIGQFEGIQEKLADIAGKTYLQEAMRVLTTEGLGMGLKPSVVTAIAKYHMTEIGRDVLDSAMDIQAGKAIQNGPQNTLASGYVAQPIAITVEGANILTRNLMIFGQGVMRCHPYLQSMVESIHSEDKGADKTFNKILRKTVGYSVANSLRAFRLGVLPFTAGSKSSLPEVQAYEKAAHQLSAKLAVYADFSLLVLGGKLKQAEMLSARLGDVMSYLYAAMASIKYYEQKVAVADRQAAAPYFHYATRWALQNAENALHKFLDNFPASGTRKFMRVITMHYTYRMPAIGDDLVRELAKAAQMDTAFKAQLTHLIKPTAGDGHDINEQAYKAKMACLDLLAKVKKALRKKEIKAGVRFAQTLDNALAANLISSQEYAQLIDYNKKREKAIRVDEFDFDLNLLDDNAQPIEKVKQAS
>NZ_AP021847.1|WP_152087743.1|153534_154479_-|kinase
MLYQFLSDRFSEIIDKDKHSVLWSGCGEVRKMRLDGQHAVVKYSQVPKQLAHRHIEQSDFALSRKLNSYAIELKFYQDHSKCFIERCRVPKLLFATEQNKSTCLVLEDFTAYGYASPSDVSQKVHYAVLGWLARFHSFTLNNSGIGWHQGGYWHLATRPDEWQRMQHHALKTHAQDINDLIEQCPYRCVIHGDAKLANFALNSEFDVIGYDFQYVGAGVGVQDVMLYLTSVCDSSSLHESGEHLLAYYFLQLSQELRKTLSEEQTLDVVNYWQALWPVVWADFHRFLTGWKPDHFKINQYMLAQTSLTLSQVRQ
>NZ_AP021847.1|WP_152087742.1|152713_153532_-|EamA-family-transporter
MIYALLSALCWAGFDWCRKQLAHWYSAPFMSIMFSFLVLPIFVTFWLFSGAQLPTENYYTSATISGLIAALGSVSFIRALAIGKMAIILPMLSFTPVWSAMLAWLWLNEPLSTSQALAILTITLGSFWVLGGKLKATEKGVGHALLAALCWGSCIVLDKYALQYATKEFHATYITLIVFFATSLLLKIIVKPQVVKMRVKWWLFATVCFSGAVIFQFIAIEQLQPGLVEGLKRGVGILSALFIGFLLYKETLSAKQLMAIGLIIVSTLVLVY
>NZ_AP021847.1|WP_152087741.1|151061_152678_+|S8-family-serine-peptidase
MKKSVSNSVKLSILSACVGAALSAGTAYADEGQRVIVTLKDSAINTLPLSVSKSDAANYKQQALASFAHQLNLQPMTALPSVNAVVMEVTPEKLEELKANPQVANVEADPKRFLMAESTPYGINMVQANQLADTMSGNRKVCIMDTGYTLNHPDLPSTGITGDDGYGSNDTGNWYNDGNGHGTHVAGTIAAIGGNGQGVVGVNPSGQLGLHIVKVFNDQGRWAYGSDLIKAIEQCESAGANVTSMSLGGSGSSTAERSAFQNSYNRGVLHIAAAGNSGNSSLSYPASYDAVVSVAAVDSSENKASFSQYNSQVEIAAPGVGVNSTWNDNGYKSISGTSMATPHVSGVAALVWSHFPNCTNDEIRKVLNNTAKDKGTAGRDTSYGYGIVQAKAAYDYIAQNGCGDPVGGPVASFSFSVNGTTVKFTNSSTDARSYSWQFGDGASSAEVSPSHTYAAAGTYQVTLTATDGAKTNSVTKSVQIGDVTPPGCDGLAAWSASKMYKIGNEVSYKNYKYEAIWWSRAAQPDVFSNVWKRVGSCN
>NZ_AP021847.1|WP_152087740.1|149803_150862_+|substrate-binding-domain-containing-protein
MLQKIVTLICFLLLTLPCYAQQIKVTFVNPGFSQDNPTGNFWLNVSEFMQAAADDLNVELSILYADRNHIDMKRLINKALTRKDNYIVLVDEKSAATQALLTSTELHDKVIFLLNKPTKQEVMRLNARGFGILGSIIPDNYQAGRLLIQELEKHVTKSKKNPTINTLALLGESATDAAKLREQGLLSYSNRSYYLKLLERVSANWSEQEAYTVAKGLLRRFDDTKVIWAANDAMATGAARAAQELNMRQHVIIGGINWDKDQHKKLNVSVGGHVSLGALAIIKIADFDADNKNYIGDLKLPIFKSYAPKYESLYQAIHNKELDKIDFRYFSYSHTTPAPKPYTLDNMTALVK
>NZ_AP021847.1|WP_152087739.1|149267_149660_-|hypothetical-protein
MYQYLYVALLCLSSFAFSKQSSDLEVTMKNMGHAYKQAMQSESQQELLAAIDSFREHLHVSKQHQFSPELHDESQKGLSKVSSVLDESIMLVNQGHLVAAKTKLKEIDELRKHYHQLHEPPSIWDLLFGN
>NZ_AP021847.1|WP_152087749.1|162424_162955_-|hypothetical-protein
MHKAIFIFIFISTSTVAKQEIKEVTLLTKLECKQGKVFATIINKSQKKVDIPYGLLGVKNSFGWGSIQVFEKSKFDELMEKPSPLKMKEISLSPIKGGDESKEITLGAFEKLSYPLNLKSGFRVDGSEKYIAVLIIVLGEVVLDDSIKGYITSVSNPVTFSLAGMCEEMPRIKDDR
>NZ_AP021847.1|WP_152087750.1|162958_163936_-|hypothetical-protein
MNGRVYDYNLGRFMSVDPVIQSPGNSQSINPYSYIMNNPLAGVDPSGYEAEKKETVEVAADAEVQQDTDGNYYVSAGDGSGELIQIDSVKGTTSNGSSRTVNLGAGGKVESVEIVDIGSQGLITQVNNSYKSGVGGVSDPKVRENLTDEQWMKTKREIENNKWMILGVIAALSDPSSEEYKGIASDYGYHVGIDDFSEAAEYLLQNYRQALSILEKLERKDFYYYPASGNYGEYTQRIGLSRMFYKISQHKYVSSTITHEISHGIGFKHEKGKNTTFGREKGDLIHLALIGRTAASALARLDARKQLLTNAFQFERTALKFDHRK
>NZ_AP021847.1|WP_152087751.1|163954_164413_-|Cys-tRNA(Pro)-deacylase
MTPAIKLLEKNKIIFEILKFEHDANSPSFAAEAAEKLNLNAAQVFKTLLVDVDGELNVAILPATRQVDLKAFAKVCKGKKAILADAKKAQNTTGYLIGGISPFAQKKRLNTLLHSDAQQFERIYVSAGKRGLEVAVAPSDCISLCNAAFAHF
>NZ_AP021847.1|WP_152087752.1|164798_165932_-|molecular-chaperone-DnaJ
MSKRDYYEVLGVSKDASERDIKKAYKRLAMKYHPDRTAGNPELETKFKEVKEAYEVLTDSQKRQMYDQYGHAAFDQNGGGHGGFGGGQGDFGDIFGDVFGDIFGGGGRRQSRQQRGADLRYNMDLTLEEAVRGKDVEIKVPTWVSCSPCDGSGAKAGSKPKTCTTCHGAGQVQMRQGFFAVQQTCPTCQGTGSIISDPCNKCHGQGRVEKTKTLSVKIPAGVDTGDRIRLSGEGEAGMHGAPAGDLYVQVAVREHPIFTRDGNNLYCEVPISFSTAALGGEIEVPTLDGRANLKIPAESQTGKMFRMRGKGVKSVRSGAVGDLICKVVLETPVNLNERQKELLKEFEESMGGDNSKNRPKAQGFFDGVKKFFDDLTK
>NZ_AP021847.1|WP_152087753.1|166061_167987_-|molecular-chaperone-DnaK
MGKIIGIDLGTTNSCVAVLDGDKARVIENAEGDRTTPSIIAYTAEGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFEDEEVQRDIGIMPFQIVKADNGDAWVEVRGEKRAAPQISAEVLKKMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGMDKKQGDNVVAVYDLGGGTFDISIIEIDEVDGEHTFEVLATNGDTHLGGEDFDNRVINYLVAEFKKDQGIDLKTDPLAMQRVKEAAEKAKIELSSAQQTEVNLPYVTADATGPKHMNVKLTRAKLESLVEDLVTKSIEPLKQALADADLSVGDVNDIILVGGQTRMPLVQKTVAEFFGKEPRKDVNPDEAVAVGAAVQGGVLAGDVKDVLLLDVCPLSLGIETMGQVMTALIEKNTTIPTKKSQTFSTAEDNQSAVTIHVLQGERKRSSDNKSLGQFNLEGIRPAQRGVPQIEVTFDVDADGILHVSAKDKDTGKEQKITIQASSGLSDDEVEKMVRDAEANAEEDKKFEELVSSRNQADAMVHGTRKQVEEAGDALPAEDKEAIEAALTELETAIKGDNKEEIDAKVQALAEKSQKLMEIAQAKAQAGQAGPDAGAQQSSAKQDDDVVDAEFEEVKDDNK
>NZ_AP021847.1|WP_152087754.1|168205_169006_+|thioesterase-family-protein
MTFDQLINNPALANNDSMFSFPENWCQGRTAFGGLSAAFMLKSMFYRLTDDRRLLSLSTNFVGPLLADEPFQISTQVLRSGKNATQMLSTLTQADKVCLIAQGCFAKDRNSSITVPSADKCTLEPVQPKHVLPYQEGLMPAFFQHVALNAQQGALPFSNAKSSNLGGWMKFKAEPEHQLNALHLLALADAWPPTLLQMCSAPSPASSMSWYIEFLSDIKLPKDAWLGFEALTHHSAKGYGVEDANIYGPDRQLLALSRQTVAVFDS
>NZ_AP021847.1|WP_152087755.1|169086_170295_+|PqiA/YebS-family-transporter-subunit
MILACKHCDRLINVGHIGQQQRARCPVCHSHLLSCKNNQQQWLSAFSIASLLFLFSSLYSPFISFAQKGLSQQITLWDAALLLSEKYSTALAVVFVFTILVMPLFMCFLVLLTNSPLWSKLNPHNARWIAKTLSYIMPLNLADIFLVAVLVSTFKLMSYAELSLGYGFWAYVLFVFCFIELLTLIDANELWQRQQKQFEPKPLLCGQSALSQSLKQCNVCGQLTAHEHCPRCYAKTHFRKPQASARAFAWMLTSLVLMVPANLLPIMNTINLGQDTFATVFSGIVIMWQSGSYPIAAIIFVASICIPLFKALALFYLLYEAKMCNNPKRASQLYRWLEWMGKWSMIDVFVVIVLVSLVQLGSVLTVEPQIGIVFFAVMVLCQMMAVHSFDPRILWDKLKANE
>NZ_AP021847.1|WP_152087756.1|170287_171943_+|intermembrane-transport-protein-PqiB
MNEHAYIESKPKFSVIWFIPIIALFVTAWMLYQHQLNQGQTIFVKMTTADGIVAGKTEVRVRSVKVGVVQSLRLQLDQNAVIAKVQIDNMYTSLLSADAKIWVVKPRIDESGISGMNTLLSGVYLELEPGSSNVKSSLFTLQDEPALIASDIKGKRYRLKSRHAEVLDVGTSIYFRNFKIGQIESTNFNTDNLAMEYGVFVFSPYDKLITDNVIFWVSSGVSVNLSTEGIQVSTGSLSKLIKGGISVDYPPNQEPSAEATQNSQFTLHENFSVALEQRFDDYDFYLIEFEQSIRGLSPGAPVEYRGMRIGTVEQAPAQLQRDGQPLYFQQGSTSLPVLIRIEYGRLFEKSQLAREYWQKNIEQWIRNGLRASLKSGNMLTGAVYIELDFYPESPQASVTTASLYPTLPSVSSGFTALSEQVTKLLNKLNDLPLNNTLTQLDGTLQQYRQMAMEMNQLVSTFNQNGTANKVNDNLDNISTTLTQLTSSLKQFEKTLTHYQQDSTMVEQLTDTLEELESLSNTLKPFAKSLNEQPNMLIFNKNNVEDPEPRKK
>NZ_AP021847.1|WP_152087757.1|171943_172540_+|membrane-integrity-associated-transporter-subunit-PqiC
MRVILASLVLAFATGCSHSVTNPNAYFSFAAATGVNSDTDVAAQKRTLKIHSIKLSGIADQQAIVQIQPDNQVSVAQHHFWAEHPNDMLSKKLHNLLSNKLDLWQVVSANVPTSGYNTIYLMVEVTEFAGHYEAGTLLSGSWYLYEKNNTSDQLLAYQNFTLSEPLTKDGFPALVRALETSWMQVAKQIAKQLHALEN
>NZ_AP021847.1|WP_152087758.1|172547_173051_-|GNAT-family-N-acetyltransferase
MIIINTERLVIRKATLSDDAFILKLLNQKSFIDNIADKKVYTLADAQNYIQGAFLDPYMQGLKAPFIVTLQDGTAIGVAGFYQRPVFKEPDLGYAFLDEFTGKGYASEAANALLKFAKDNLQLDTVLAITSLTNEASIKLLRFCGFDFKQTIELEPAVVSNLYEIHF

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Crispr_ID: NZ_AP021847_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP021847_2

728815-731305

TypeI-F

Consensus_repeat	Method
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	PILER-CR
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CRISPRCasFinder
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CRT

41 spacers

cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of NZ_AP021847_2

>merge|NZ_AP021847|2|728815-731305|PILER-CR,CRISPRCasFinder,CRT
TTTCTGAGCCGCCTATGTGGCGGTGAACTATTTGCCGTCATCACCAGTTGGCTCTTCATCTTTCTGAGCCGCCTGTGTGGCGGTGAACTGATTGTATCTGCAATCCTGCTTCGCTGCGTACTTTCTGAGCCGCCTGTGTGGCGGTGAACAGCAACAGCTAAAAACATGTGCTACGTGTACATTTTCTGAGCCGCCTGTGTGGCGGTGAACGAAAGGGACTTTTCTATGACGAACATATATTTATTTCTGAGCCGCCTGTGTGGCGGTGAACTTGACCAAATAGCGCCGTTGCCTACTCGGGAGTTTCTGAGCCGCCTGTGTGGCGGTGAACAAAACGCTGTACCCTTGCAAATAAAACCTATTTTTCTGAGCCGCCTGTGTGGCGGTGAACGCCGTAAAAAATCGCCGTTTAACGGGCTAGGTTTTCTGAGCCGCCTGTGTGGCGGTGAACACACGCAGAAGGCGGGCCAACTCAGCAGGCGTTTTCTGAGCCGCCTGTGTGGCGGTGAACGTCTTCGTCTGCATTGTCTGACATAGCCACTATTTCTGAGCCGCCTGTGTGGCGGTGAACTACAACCCGAATACAATGCAGTGTTTGTACGTTTTCTGAGCCGCCTGTGTGGCGGTGAACATCGTGCGACAAAACGGCGGCTTTCACTTGTGTTTCTGAGCCGCCTGTGTGGCGGTGAACCTAAAGGCGTTTGCGTACGGGGTGGCAATTGCTTTCTGAGCCGCCTGTGTGGCGGTGAACAAAAGAGCGAAAATTTCGCTCTTTTCGCTATAGTTTCTGAGCCGCCTGTGTGGCGGTGAACGCGGTGCTGCTGGTTAAACCCAACTCTTTATATTTCTGAGCCGCCTGTGTGGCGGTGAACAAAGATTACACAATCAAAGCGCCAGTGTGGAATTTCTGAGCCGCCTGTGTGGCGGTGAACAAAAACAACAAGCCACCTATGCCGAAGGGTATTTTCTGAGCCGCCTGTGTGGCGGTGAACGCTTTATTAAATTCGACCTCAATAACCCACCGTTTCTGAGCCGCCTGTGTGGCGGTGAACCAACGTAAATTCGGGCGTAGAACGGTCTGATGTTTCTGAGCCGCCTGTGTGGCGGTGAACAACGAAGAACGTTCTTTTACTCGGTTGCTAATTTTCTGAGCCGCCTGTGTGGCGGTGAACTTATACGATTACAGAGAAGAAATTGGTTTTGTTTTCTGAGCCGCCTGTGTGGCGGTGAACTACTTCATTGCGTAGAGATAGTATTTCGAACATTTCTGAGCCGCCTGTGTGGCGGTGAACCTTCATCAACGGATTTGCCGATCCTGTAGTTATTTCTGAGCCGCCTGTGTGGCGGTGAACCTGCCGCTTATTTCGCATCTGCTTCTGGTTTATTTCTGAGCCGCCTGTGTGGCGGTGAACATGAACCACAAGGCATGGTTGAATTGCATTTATTTCTGAGCCGCCTGTGTGGCGGTGAACCAGTCACACCAAAGAGCAAAAAAGGACATTCTTTTCTGAGCCGCCTGTGTGGCGGTGAACTCTAGGCCCACTTATCGACAGTATGTTCGGATTTTCTGAGCCGCCTGTATGGCGGTGAACCTGTTCAGTGTCAAGGCGGTAATGACTCAGGCTTTCTGAGCCGCCTGTGTGGCGGTGAACACTGCGGCAAGAACTGAACGCAACAAGCTAAATTTCTGAGCCGCCTGTGTGGCGGTGAACATGCAAGAGCAAAACACGCAGCTAATACAACATTTCTGAGCCGCCTGTGTGGCGGTGAACTCGCGCCTTGGTTAATGTGTGCTTTGCGGAATTTCTGAGCCGCCTGTGTGGCGGTGAACACCAAAACCCAATGTGAACACAGGCGTAGACTTTTCTGAGCCGCCTGTGTGGCGGTGAACGGGTGTAAACTTGTGTGTTAGGCACTTTTTTATTTCTGAGCCGCCTGTGTGGCGGTGAACCCCTGCTCTAATTGCTTGTTCTCATCTATACCTTTCTGAGCCGCCTGTGTGGCGGTGAACAATTGCTGCAGTAGGTGCAATCGTGGCCGAAGTTTCTGAGCCGCCTGTGTGGCGGTGAACCACGGGTATTGGGGTATTCAACGAGTAAGTCATTTCTGAGCCGCCTGTGTGGCGGTGAACGTCAGGGTTAAAAATGCTTGACGTTCTCGTTCTTTCTGAGCCGCCTGTGTGGCGGTGAACACAGTATCAGAAAGCGGCAAAGCTTGGGTTAATTTCTGAGCCGCCTGTGTGGCGGTGAACGCGCGCTTGCGGGTGATATGCTGGCACTTGCGTTTCTGAGCCGCCTGTGTGGCGGTGAACTCGAACAGCGTATGTTTGCACTTGGCACCGCATTTCTGAGCCGCCTGTGTGGCGGTGAACAACCCGATGCAGATGCAAAATACGCAGCAGTATTTCTGAGCCGCCTGTGTGGCGGTGAACGAGCTTGACGCGAATCTAGATGATGTTTATCTTTTCTGAGCCGCCTGTGTGGCGGTGAAC

>NZ_AP021847|2|1|728815-731305|PILER-CR
TTTCTGAGCCGCCTATGTGGCGGTGAAC	TATTTGCCGTCATCACCAGTTGGCTCTTCATC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TGATTGTATCTGCAATCCTGCTTCGCTGCGTAC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AGCAACAGCTAAAAACATGTGCTACGTGTACAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAAAGGGACTTTTCTATGACGAACATATATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTGACCAAATAGCGCCGTTGCCTACTCGGGAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAACGCTGTACCCTTGCAAATAAAACCTATT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCCGTAAAAAATCGCCGTTTAACGGGCTAGGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACACGCAGAAGGCGGGCCAACTCAGCAGGCGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCTTCGTCTGCATTGTCTGACATAGCCACTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACAACCCGAATACAATGCAGTGTTTGTACGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATCGTGCGACAAAACGGCGGCTTTCACTTGTG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTAAAGGCGTTTGCGTACGGGGTGGCAATTGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAGAGCGAAAATTTCGCTCTTTTCGCTATAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGGTGCTGCTGGTTAAACCCAACTCTTTATA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAGATTACACAATCAAAGCGCCAGTGTGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAACAACAAGCCACCTATGCCGAAGGGTAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCTTTATTAAATTCGACCTCAATAACCCACCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAACGTAAATTCGGGCGTAGAACGGTCTGATG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACGAAGAACGTTCTTTTACTCGGTTGCTAAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTATACGATTACAGAGAAGAAATTGGTTTTGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACTTCATTGCGTAGAGATAGTATTTCGAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTTCATCAACGGATTTGCCGATCCTGTAGTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTGCCGCTTATTTCGCATCTGCTTCTGGTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGAACCACAAGGCATGGTTGAATTGCATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAGTCACACCAAAGAGCAAAAAAGGACATTCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCTAGGCCCACTTATCGACAGTATGTTCGGAT
TTTCTGAGCCGCCTGTATGGCGGTGAAC	CTGTTCAGTGTCAAGGCGGTAATGACTCAGGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACTGCGGCAAGAACTGAACGCAACAAGCTAAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGCAAGAGCAAAACACGCAGCTAATACAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGCGCCTTGGTTAATGTGTGCTTTGCGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACCAAAACCCAATGTGAACACAGGCGTAGACT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GGGTGTAAACTTGTGTGTTAGGCACTTTTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CCCTGCTCTAATTGCTTGTTCTCATCTATACC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AATTGCTGCAGTAGGTGCAATCGTGGCCGAAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CACGGGTATTGGGGTATTCAACGAGTAAGTCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCAGGGTTAAAAATGCTTGACGTTCTCGTTC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACAGTATCAGAAAGCGGCAAAGCTTGGGTTAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGCGCTTGCGGGTGATATGCTGGCACTTGCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGAACAGCGTATGTTTGCACTTGGCACCGCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACCCGATGCAGATGCAAAATACGCAGCAGTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAGCTTGACGCGAATCTAGATGATGTTTATCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC

>NZ_AP021847|2|2|728815-731305|CRISPRCasFinder
TTTCTGAGCCGCCTATGTGGCGGTGAAC	TATTTGCCGTCATCACCAGTTGGCTCTTCATC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TGATTGTATCTGCAATCCTGCTTCGCTGCGTAC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AGCAACAGCTAAAAACATGTGCTACGTGTACAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAAAGGGACTTTTCTATGACGAACATATATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTGACCAAATAGCGCCGTTGCCTACTCGGGAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAACGCTGTACCCTTGCAAATAAAACCTATT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCCGTAAAAAATCGCCGTTTAACGGGCTAGGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACACGCAGAAGGCGGGCCAACTCAGCAGGCGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCTTCGTCTGCATTGTCTGACATAGCCACTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACAACCCGAATACAATGCAGTGTTTGTACGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATCGTGCGACAAAACGGCGGCTTTCACTTGTG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTAAAGGCGTTTGCGTACGGGGTGGCAATTGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAGAGCGAAAATTTCGCTCTTTTCGCTATAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGGTGCTGCTGGTTAAACCCAACTCTTTATA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAGATTACACAATCAAAGCGCCAGTGTGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAACAACAAGCCACCTATGCCGAAGGGTAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCTTTATTAAATTCGACCTCAATAACCCACCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAACGTAAATTCGGGCGTAGAACGGTCTGATG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACGAAGAACGTTCTTTTACTCGGTTGCTAAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTATACGATTACAGAGAAGAAATTGGTTTTGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACTTCATTGCGTAGAGATAGTATTTCGAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTTCATCAACGGATTTGCCGATCCTGTAGTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTGCCGCTTATTTCGCATCTGCTTCTGGTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGAACCACAAGGCATGGTTGAATTGCATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAGTCACACCAAAGAGCAAAAAAGGACATTCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCTAGGCCCACTTATCGACAGTATGTTCGGAT
TTTCTGAGCCGCCTGTATGGCGGTGAAC	CTGTTCAGTGTCAAGGCGGTAATGACTCAGGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACTGCGGCAAGAACTGAACGCAACAAGCTAAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGCAAGAGCAAAACACGCAGCTAATACAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGCGCCTTGGTTAATGTGTGCTTTGCGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACCAAAACCCAATGTGAACACAGGCGTAGACT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GGGTGTAAACTTGTGTGTTAGGCACTTTTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CCCTGCTCTAATTGCTTGTTCTCATCTATACC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AATTGCTGCAGTAGGTGCAATCGTGGCCGAAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CACGGGTATTGGGGTATTCAACGAGTAAGTCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCAGGGTTAAAAATGCTTGACGTTCTCGTTC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACAGTATCAGAAAGCGGCAAAGCTTGGGTTAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGCGCTTGCGGGTGATATGCTGGCACTTGCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGAACAGCGTATGTTTGCACTTGGCACCGCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACCCGATGCAGATGCAAAATACGCAGCAGTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAGCTTGACGCGAATCTAGATGATGTTTATCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC

>NZ_AP021847|2|1|728815-731305|CRT
TTTCTGAGCCGCCTATGTGGCGGTGAAC	TATTTGCCGTCATCACCAGTTGGCTCTTCATC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TGATTGTATCTGCAATCCTGCTTCGCTGCGTAC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AGCAACAGCTAAAAACATGTGCTACGTGTACAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAAAGGGACTTTTCTATGACGAACATATATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTGACCAAATAGCGCCGTTGCCTACTCGGGAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAACGCTGTACCCTTGCAAATAAAACCTATT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCCGTAAAAAATCGCCGTTTAACGGGCTAGGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACACGCAGAAGGCGGGCCAACTCAGCAGGCGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCTTCGTCTGCATTGTCTGACATAGCCACTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACAACCCGAATACAATGCAGTGTTTGTACGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATCGTGCGACAAAACGGCGGCTTTCACTTGTG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTAAAGGCGTTTGCGTACGGGGTGGCAATTGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAGAGCGAAAATTTCGCTCTTTTCGCTATAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGGTGCTGCTGGTTAAACCCAACTCTTTATA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAGATTACACAATCAAAGCGCCAGTGTGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AAAAACAACAAGCCACCTATGCCGAAGGGTAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCTTTATTAAATTCGACCTCAATAACCCACCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAACGTAAATTCGGGCGTAGAACGGTCTGATG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACGAAGAACGTTCTTTTACTCGGTTGCTAAT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TTATACGATTACAGAGAAGAAATTGGTTTTGT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TACTTCATTGCGTAGAGATAGTATTTCGAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTTCATCAACGGATTTGCCGATCCTGTAGTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CTGCCGCTTATTTCGCATCTGCTTCTGGTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGAACCACAAGGCATGGTTGAATTGCATTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CAGTCACACCAAAGAGCAAAAAAGGACATTCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCTAGGCCCACTTATCGACAGTATGTTCGGAT
TTTCTGAGCCGCCTGTATGGCGGTGAAC	CTGTTCAGTGTCAAGGCGGTAATGACTCAGGC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACTGCGGCAAGAACTGAACGCAACAAGCTAAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ATGCAAGAGCAAAACACGCAGCTAATACAACA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGCGCCTTGGTTAATGTGTGCTTTGCGGAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACCAAAACCCAATGTGAACACAGGCGTAGACT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GGGTGTAAACTTGTGTGTTAGGCACTTTTTTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CCCTGCTCTAATTGCTTGTTCTCATCTATACC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AATTGCTGCAGTAGGTGCAATCGTGGCCGAAG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	CACGGGTATTGGGGTATTCAACGAGTAAGTCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GTCAGGGTTAAAAATGCTTGACGTTCTCGTTC
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	ACAGTATCAGAAAGCGGCAAAGCTTGGGTTAA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GCGCGCTTGCGGGTGATATGCTGGCACTTGCG
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	TCGAACAGCGTATGTTTGCACTTGGCACCGCA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	AACCCGATGCAGATGCAAAATACGCAGCAGTA
TTTCTGAGCCGCCTGTGTGGCGGTGAAC	GAGCTTGACGCGAATCTAGATGATGTTTATCT
TTTCTGAGCCGCCTGTGTGGCGGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP021847.1\|WP_152088175.1\|727793_728603_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|376667
NZ_AP021847.1\|WP_172971690.1\|720736_721204_-\|DUF3293-domain-containing-protein	unknown	unknown	gnl\|CDD\|378695
NZ_AP021847.1\|WP_152088171.1\|722334_723357_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380185
NZ_AP021847.1\|WP_152088180.1\|735456_738867_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_AP021847.1\|WP_152088184.1\|741703_742594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021847.1\|WP_152088177.1\|732117_733146_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_AP021847.1\|WP_152088176.1\|731457_732108_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|187870
NZ_AP021847.1\|WP_152088174.1\|726360_727338_-\|DUF1852-family-protein	unknown	unknown	gnl\|CDD\|370181
NZ_AP021847.1\|WP_152088185.1\|742857_744108_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP021847.1\|WP_152088173.1\|725306_726335_-\|methionine-synthase	unknown	unknown	gnl\|CDD\|181659
NZ_AP021847.1\|WP_152088170.1\|721652_722042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP021847.1\|WP_152088178.1\|733182_734121_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_AP021847.1\|WP_152088179.1\|734117_735410_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
NZ_AP021847.1\|WP_152088172.1\|723621_725217_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_AP021847.1\|WP_152088183.1\|741254_741695_+\|DoxX-family-membrane-protein	unknown	unknown	gnl\|CDD\|225168
NZ_AP021847.1\|WP_152088182.1\|740170_741037_-\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|225980
NZ_AP021847.1\|WP_152088181.1\|738863_739841_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_AP021847.1\|WP_152088166.1\|715822_718441_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_AP021847.1\|WP_152088168.1\|719741_720461_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119373
NZ_AP021847.1\|WP_152088167.1\|718857_719754_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP021847.1\|WP_152088175.1\|727793_728603_+\|TSUP-family-transporter	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	5.80138e-28
NZ_AP021847.1\|WP_172971690.1\|720736_721204_-\|DUF3293-domain-containing-protein	gnl\|CDD\|378695	pfam11697, DUF3293, Protein of unknown function (DUF3293). This bacterial family of proteins has no known function.	3.81953e-05
NZ_AP021847.1\|WP_152088171.1\|722334_723357_+\|hypothetical-protein	gnl\|CDD\|380185	NF033178, auto_BigA, autotransporter adhesin BigA. Members of this family are the adhesin BigA, found in Salmonella. BigA is an autotranporter, meaning is has a C-terminal outer membrane beta-barrel, through which passenger regions of the proteins are transported.	1.35e-07
NZ_AP021847.1\|WP_152088177.1\|732117_733146_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_AP021847.1\|WP_152088176.1\|731457_732108_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	5.42346e-54
NZ_AP021847.1\|WP_152088174.1\|726360_727338_-\|DUF1852-family-protein	gnl\|CDD\|370181	pfam08908, DUF1852, Domain of unknown function (DUF1852). This family of proteins are functionally uncharacterized.	0
NZ_AP021847.1\|WP_152088185.1\|742857_744108_+\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.57362e-28
NZ_AP021847.1\|WP_152088173.1\|725306_726335_-\|methionine-synthase	gnl\|CDD\|181659	PRK09121, PRK09121, methionine synthase.	0
NZ_AP021847.1\|WP_152088178.1\|733182_734121_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	2.04332e-137
NZ_AP021847.1\|WP_152088179.1\|734117_735410_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.47049e-131
NZ_AP021847.1\|WP_152088172.1\|723621_725217_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	6.3028e-101
NZ_AP021847.1\|WP_152088183.1\|741254_741695_+\|DoxX-family-membrane-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	4.05797e-18
NZ_AP021847.1\|WP_152088182.1\|740170_741037_-\|GyrI-like-domain-containing-protein	gnl\|CDD\|225980	COG3449, COG3449, DNA gyrase inhibitor [DNA replication, recombination, and repair].	1.68643e-36
NZ_AP021847.1\|WP_152088181.1\|738863_739841_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	1.68515e-171
NZ_AP021847.1\|WP_152088166.1\|715822_718441_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	7.4362e-22
NZ_AP021847.1\|WP_152088168.1\|719741_720461_-\|hypothetical-protein	gnl\|CDD\|119373	cd00599, GH25_muramidase, Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.	1.73435e-62
NZ_AP021847.1\|WP_152088180.1\|735456_738867_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0

>NZ_AP021847.1|WP_152088175.1|727793_728603_+|TSUP-family-transporter
MNELIILIFYCAILGSGVGFLAGLLGIGGGLVIVPILSSILLYFSILPAEQVVIAAIATSLASILFTSTSSALAHHKNGNVPWTIAPWIMTGVALGALISGFLATHLPEHVVRMVFAVTVVLIAIKMFLSSKNNTPTQRKMPNKGMLTLFTTLTGGLSAMIGIGGGALLVPLLTFFSIDMKKAIGCASACGIVIALFGTIGYISSGSTQFALSDGFAGFVYLPALAGIVCTSWFTAPLGAKATHLLPVTTIKKIFAVLLVVMAVNMMVK
>NZ_AP021847.1|WP_152088174.1|726360_727338_-|DUF1852-family-protein
MNKDITFTIKSNRLDEHYQPSDSTRITTNFANLARGKSRQQNLRNALTMIDNRFNALAHWDNPKADRYNLELKIISVDLDIARSGQAFPSIEVLQTHILDHQTGERIEGIVGNNFSSYVRDYDFSVLLLDHNKNKPQFSIPDNFGELHGKLFKYFVESNTYKSCFKKPPVICLSVSDSKTYRRSENQHPVLGFEYHPNESSLTEQYFKKMGLAVRYFMPPNSVAPLAFYFFGDLLNDYTNLELISTIATMETFQKIYRPEIYNANAVAGKLYRPNLKNSDHSVTQIVYDREERSKLAVQQGKFAQDCFIKPYQSVLEQFSANYAL
>NZ_AP021847.1|WP_152088173.1|725306_726335_-|methionine-synthase
MKTLLPTSTAGSLPKPAWLAQPETLWSPWKLQGNELADGKQDALRVSLQEQQLAGIDIVSDGEQTRQHFVTTFIEHLDGVDFEKRQTVKIRDRYDASVPTVVGPVARQKPVFVDDAKFLRQQTKQPIKWALPGPMTMVDTLHDEHYKSREKLAWEFAKILNQEAKELEAAGVDIIQFDEPAFNVFFDDVNDWGIAALERAIEGLKCETAVHICYGYGIKANTDWKKTLGSQWRQYEQAFPKLQKSNIDIISLECHNSHVPIELLELVRGKKVMVGAIDVATNTIETPEEVANTLRAALKYVDADKLYPCTNCGMAPLPRAVANAKLQALSAGADIVRQELMR
>NZ_AP021847.1|WP_152088172.1|723621_725217_+|ATP-binding-cassette-domain-containing-protein
MSVLHAYNLSYQFSNGDMLFNNLSCTLSHQRTALVGDNGVGKSILGKLLAKQLEPSLGHVELHGQVAMFSQEPQQLVNSNITIAQFLGYEKVFAALEAIAQGDYEQTLFDQVADHWRLPELLSAQLANLGLADNPHLPCCMLSGGQLARLRLWQLFNSSANVLILDEPSNHLDSNGRAWLLEQLNSFSGYALLISHDQQLLQHVTHIWELSNLGLKHYGGNIQHYLLQKDIEQQAVHQQLHELKRQQVQLKLQAQKDKEKAQQRASQGKKLRVQGSQAKVLLNSQKDKAGANLASKQKNQLQRNQKLLSKTEQLQLKSQQHNAIEFYFNERQEEAIAKKTLVSLLDLQLPFGNASAINLQVKAGQKWHIKGNNGCGKSTLFKVLLNNLRPISGEVKVNTTLSYVDQHFSQLPSQLSVAQVVEQNCPTICKSDCYTLLAGIGLKHKKVEQPIASLSGGEKMKLTLLCASQQRPAPLLLLDEPDNHLDLRSRQQLAKALYDYKGSFLLVSHDAYFVEQISVTHTLTMQSKNAV
>NZ_AP021847.1|WP_152088171.1|722334_723357_+|hypothetical-protein
MLKHITPLLCAVTLSGCIVHINTASADAKEHVQRQLQLSANNLQSLSARANAGDIKIIGSSTTSEITANADIYTHEPNQFVFTLEQQGNSAKLIAEVDSHVSFGFVTSSPRIDMTITMPSHLALALQDSSGDITINGLNADINVEDGSGDITINGGANITLDDDSGSITLNNATGVLEIEDGSGDISIAGGKRLTLTDDAGNISLSGIVGDMDIKDGSGDINIIGGQNLNLRDDSGNIDIVELTGSLFIIDGSGNLSVDGAQDITIRDDAGNIQITDAKGDVSINDGSGDLRVSNSQGNVTINDDAGDIYVDGALSLAIESDTSGGVHVDNIKQGVKVKQ
>NZ_AP021847.1|WP_152088170.1|721652_722042_+|hypothetical-protein
MKKLLLTTISGLISSASFFSLATPDLASGYFSTQEVLEYGRTHQVVKEQLNNAGYELQSCEQNPVYYFAPPSEEVYLFAQAECYYSVPKDPNNYAFRTDYASVVVDIHYHQHNFLYHEGNVNVSYFTAY
>NZ_AP021847.1|WP_172971690.1|720736_721204_-|DUF3293-domain-containing-protein
MISEHLWQVYQQVYFQSCVFSNTLQAPSNHSINHKHGCIISLWNPRGAKCTKLTNRLMAKKVCSRLKALGYRYDLLWGGDRRMAYKELSAFVSCTLMEAKEIASHSEQLAFYYVSHRGMLWLVRSDDIKFKKRVCKDIQRRMRITVFSRKNLAFK
>NZ_AP021847.1|WP_152088168.1|719741_720461_-|hypothetical-protein
MSYKLLTQIAVLTTIVILCINRPVLFDVFVPLKSSSEFSLGTHGIDVSHDQGEVDWQQVAQSGIEFVYLKATDGITYTDPKYFYNLEALQATNLKVGAYHFFEAEDDPQAQLEHFLTHIKGKQLSLTPMVDVELKRGQSATQIKANLKTFLIQLQKQTGCKPLLYSYGSFWQANLGSEFNDYPFWFAQYNKTMQPPKELKNIQIWQYSQKGSVPGINTPVDLDKLVDNQQGLEALKCNY
>NZ_AP021847.1|WP_152088167.1|718857_719754_-|hypothetical-protein
MQLLTSIRSLIVSQKCRLIAVLLAALSLGLLTAILQGHFADSTVINNNKQLYQSNQYYLQQVEHQIINELADVNALNAALNVAKSSQFGISFIVDFNVEIGSLLTDLSNLLEKSSHYLFWSLTLVGLIQAFTFLAEQLSPWLFQALLLYMSIWSFLCVLQPKLWCRPSLQWLAKAFAIVFVLCHMIIPYSIHVSAKTSYLVASELGHKADIGYFKNVTQELHAELSSNDLKEHAKHGVKVLHKALAVKLSDKVLRGNSVVTHNLAHKFIAFVLLPLLFAGVMFMLMKRCLKSLLVSTQ
>NZ_AP021847.1|WP_152088166.1|715822_718441_-|TonB-dependent-receptor
MGNYKPHLLSCFCMVCVSTNVHAETNDEVQAQSSIETIVVTGSRIRRSIQSESSSPISSTELSDLTDIGANDIRDLIEVLPFNAGSQNNSDNLSQNFTVGTSNVNLRGLGVSSTLVLLNGIRQVTSSVVTDQGASFVDTASLVPALAIKRVEILKDGASAIYGSDAVAGVVNFITRDDLEGGEVQYEYRSRWSEGSQDDTKIDFAYGGYVSDSAHMLLAISYLERSSLLLDEVDWLKPATSSFGNPGSFVIPSLADENNPSGLTVADPNCAANGGSVSQGSNGNSFCLFDFGPQITAVPDEDRLQAYARAQWDWSDTTRMWAELGYARNKITREVSPSFPVLNAPSILASHPNNPYGEDIFFRGRPYGVGKPTETNYYDHTTTRVAFGADGELTEGIYWQASFVAAANDAILNPRDVITDNFQASLHGFGGNKCSGGAASQAGVGECYYFNPFDPQDPNNELLRDYIIGDYMGDAESEMRVYEAVITGDSLFELDGGDAGFALGIQYRDESINNVYDSFTQQDSFAFLIGNQNFTGERDVKALFAEVLLPMSENLELGAAIRYEDYGEFGGDTTNPKVSFLWLATEELSFRGTFSTSFRAPSVHQLQGVQTNFANITDPEDGSTTFGGNRTIGDPNLVPETSEALNLGMSYAFDEYTFDIDYWDFSFEDVLTRESHQAVVNANPNDPSRVVRTSAGTISIVNTKFINAEAIDTSGLDISASTIYRTDYGDFSPQLKATYLLSYDLMDASGKTTDGLGKLNRNTVGNPSPRLRGSIGLNWSSGMHRANFYIRHVASYTNDTSGANIDSFNTLDMQYSVNLGQVLKEDSETNLIVGVVNATDEAPPYVAIAGSYDPRTGDPRGRRAYIKFQFSF
>NZ_AP021847.1|WP_152088176.1|731457_732108_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNYYLDITLLPDAEANLGFLWHKVYQQIHLLLVEHKVSEQDSAIAVSFPLYGDKPFPLGNKLRLLAESEQQLVDLKVEQWLSRLSDYVHIKAVKAVPSNIAEYAYFKRWRFKSPDKLRQQVDSRAQAIAAKNGFAVEEVKSRLLQSIDSFKQHSKLPFINLRSLSTDSMLSPAERRKFLLFIECQKTTKPSDNTPLLTCYGLSRRSEAQQVAVPWF
>NZ_AP021847.1|WP_152088177.1|732117_733146_-|type-I-F-CRISPR-associated-protein-Csy3
MAKKENTASVLAFEKKLVTSDGHMYGTTWQERTTRLQPLKLNEKSVRGTISNRLKAAIKGDPAKLNAEVEKANLQRVDACALTPEQDTLNLQFTIKVLGGITEPAACNNDLFKQSYRNAARAYIETHQFSELARRYAINLANARFLWRNRVGAEQIEVQVSAKNNQVEKSWTFDATQYSTKHFDHQDEKIDELATLIAQALSSDNDFLMLEINCYAQVGRAQEVYPSEELVLDKGKGEKSKILYQVQDIAAMHSQKLGNALRTIDTWYPEFTDPEASAGPIAIEPYGAVTNRGKAYRTPAEKQDFYTFFDVWARGEQLQATEHEHYVMAILVRGGVFGESDK
>NZ_AP021847.1|WP_152088178.1|733182_734121_-|type-I-F-CRISPR-associated-protein-Csy2
MIGAVKKLLVIPHMKVHNANALSSPFTIGFPAMTAWLGAVHALQRQLNKQHIGVAFNAVGVISHDIDLQTYKGENDYVHSIVGTGNPLDKTGARSAFIEEARCHLDVSLVIEFDNITVDERASLVEQVTQLLHGKIKMASGDIKSFNTPICVNVTHGDEGELKKLQRLLMPGYALIERRDLMIAAMNEGQDALQALIDFTSVHYSCETDDTDKVTWFRHSKQVNGASAGWIVPIATGFYGISELAAAKNQRDPDTPHRFAESLVTLGEFKMPHRILCVEDMLWRYHTQGDYYLCQQSQFATPEPCDSGNEFE
>NZ_AP021847.1|WP_152088179.1|734117_735410_-|type-I-F-CRISPR-associated-protein-Csy1
MIDKAVDAFFEERKAAWLKKNTKASMSGDEIQQTHMECESVFSLQNWLPNAAKRAGQISISTHPCTFSHPSARKNKNGYVSSIIAKSEASNDGFLRSGNVEVVADSLGNAAALDVYKFLTLVLEDGQTLLQHLEQDTDLAQRLFRTTPMHEASDYEALKEGFLAMTAPSKDVVTSSKIKQVYFPLTAKNSDDVSYHQLSLLTASGILFALRKRLDTMRFGDEIKLAREQRKANLAHPTHCEVSNLTTIGYGGTKPQNISVLNNQNGGKAHLLMSMPPKLQRRDIHFPRSDFFAQVVRYRHCQTQFKALDVLYRLPSEHFNNMHTRAKRDELYQSVIDHVIEKMYLIREVAVQQYVATSSGLAQAQRVWLCPEHEQQRLETDSWLDEICDAIVNFMFHGYEKTLGNKAITLSYAERQHMKQVVHDNKEFLR
>NZ_AP021847.1|WP_152088180.1|735456_738867_-|type-I-F-CRISPR-associated-helicase-Cas3
MMVTFVSQCEKNALKKTRRVLDAFANRIGDNTWQTLITEDGLLTVKKMLRKTASRSTAVSCHWIRSRSRSQLLWVVGNRNKFNLEGVVPVNWTRRNLLNSEIESDWHFLPLIKGLVGIAALLHDWGKATELFQSKLQPNNPNQFKGDPIRHEWISLLLLRGFIDSTSEHSDKAWLQALSRGDINEQKVQAAIKQSPLRPMAQLPPIAKLVAWLVVSHHRLPLPKQGSPDDYKSETAKSLDDMLAKITQQWGYENSYNKQEFEKRLGQCFEFPNGLMSNSKPWLSRVKRWSSSLLDYQALAIKAIETGGYRVLVHHARLCLMLGDHYYSSQQADKKWQNTTGLFANTDRATKQLKQKLDEHLVGVARYATQAAHLLPAFESELPQATDIESLRKPSPKDYKWQDKAVAQISQWRALQAEKEHKRFGFFALNMASTGCGKTFANAKVMRALSDDSKSLRYILALGLRTLTLQTGDEYAQRVGLDNTQLAVVIGSKAVMELHKKHKTAAHTSHFEQTGSESEAPLLDEDVDFECDIPQENLTTVLNSERDKKFLYAPVLACTIDHIISAIETTRGGKYILPSLRLMSSDLVIDEVDDFTDGDLIAIGRLIHLAGMLGRKVMLSSATIPPSLAEGYFKAYRDGWQLYCATRSASEHIGCAWIDEFNTHLDTNRASSLECAILQYRAKHDEFIQKRQGKLAQQPILRKADISLCEAIYDKKQVPALQVEGEQTKQSAYFSVIAKSILAKHDDHHFVDENTKLNVSFGVVRVANIKPCVALAQFLLSYDWPDDIAVRVMPYHSQQTLLLRSIQEQHLDQVLKRKESANEQPKALQNTLIREHLNKLSSQQNQVKNLIFVLVATPVEEVGRDHDFDWAVIEPSSYRSIIQLAGRVRRHRKTAVESPNVALLQYNYKAIKNAHVDGLKAFVSPGFEKSCRLKSHDLTLLIDIKQIAERLDASARICKPKHINVGYVENLTQAQSLAELEHVVTLHALAYYKSTSSGARGPGTLQGYLEHHWFLTALPQALTPFRKGAPNVKTYLVFDQYQQRSRFCEKDPQGRAIDREEILNIKRIALSAHQLQRLWLVRDFDQACAELADCHAHEQSPLTQRVISLKYGELSFPFNENKRYAYNDQLGLVKVE
>NZ_AP021847.1|WP_152088181.1|738863_739841_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MEELSPTDLKTILHSKRANMYYLEHCRVMQKDGRVLYLTEAKHENQYFNIPIANSTVLMLGNGTSITQAAMRMLAQAGVLVGFCGGGGTPLHMACEVEWFTPQSEYRPTEYLHGWLQFWFDDVKRLEAAKTFQHARIHYLEKVWSKDRELKLEGFEFHHDAIQNALSTFHKRTDEASKPSELLLTEAQLTKVLYKYAANNTGVKGFTRQHQSTDKANDFLNHGNYLAYGLAASCLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDALVLPWAFVCAKENATEQEFRQQVLQAFTDHKALDYMFDTVKQIALQAHSKEHIEANNL
>NZ_AP021847.1|WP_152088182.1|740170_741037_-|GyrI-like-domain-containing-protein
MCKESLENRIKRVCDFIQHNLEGQLDLAQLSEVAALSRYHFHRVFLAYTGVSVIKYLQLARLKRASFQLAFELDMKIIDIALTAQFDSSEAFSRAFKRTFSQTPSQFRQSPDWPNWYRLYEFTLPSNNDAIAVSIVEFAHTPIAYLTHHGNPQRVYESAGQFVAWRKQSQWSPIAHCRTFGIPNGDPSTMKEDDFEFKICGSLQQNMTSVPDNEFSVKAGAIPAMRCAKATHFGSHDTLEKTIYALYEQWLPQSQEQLGDHPVFFEYLNLIHEVDECDLRTDVYLPLA
>NZ_AP021847.1|WP_152088183.1|741254_741695_+|DoxX-family-membrane-protein
MNMINPFANNTLFANAAVLIARFGLSAIFILAGLNKIQYFDGNAQYMASAGLPAELLPLVIAFELIGGLFILTGLLSRITALAFAGFSVVSALLFHADLNDQIQFIMFFKNIAMAGGFLMLTAHGAGQWSIDQVINQKTNALKKAV
>NZ_AP021847.1|WP_152088184.1|741703_742594_-|hypothetical-protein
MRYVILLSYVFISLICFTVKAMDRVRYNIAQHMNDPKQAYYLSILQLALEKSADKYGDYQLISLSLDEAPQGRTLDLLANKDLLDVHWSVTSIEREQQLGTVYIPLLRGLMGARLFLIHKDNEQQFAAINNVQTLRQYSLGSGIDWPDTQIYERNDFDVATSDGSRLHSMLEQKRFDLFPRAVHEPWGEITDRADLLVERNFALCYPTAMYFFVNKNNHRLRKRLTYGLEKAIDDGSFEKRWLANPIIANALVNSELPKRQVLKINNPYMSIRTRDILKVARYLYEPIQACVTPLL
>NZ_AP021847.1|WP_152088185.1|742857_744108_+|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MDIAVSAKKSTSFRKYVIASIAITIILIGAYQAWQFSRAELTLNANSLVISQVQKGSFTVTVRGNGVLVPEKVQWLSASGDAKVEALLYKPGQQVSKGDEIVRLKNPRLEQELAEAKWELSALEAEHKASDLAEQAAIAKQRSDMLNAKMALAGAEHEYLAHQELIATGAVSKLDFQRAKIALEQAQQALSSAQLQMDESSKSLKAQQQARFARLNQLKNRVMRIETQVNDLTVRASIDSIILALPIEVGQHVNMGSNIAKLANQEALIAELQVPEIQIQQIAVGQKVTIDTQNNQVLGHVTRIDPEVVQGNVQVDVAFLEPLPSDARPALSVNGEITIAELSDTLYVSRPLFSQSQTQSSIYKLSSDGLMAERTPVQLGLGSVSYVQIIQGLQEGDQIITSDPSRFESFTQFRIN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP021847_1	1.1\|161788\|27\|NZ_AP021847\|CRISPRCasFinder	161788-161814	27	NC_011738	Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence	329-355	3	0.889
NZ_AP021847_1	1.1\|161788\|27\|NZ_AP021847\|CRISPRCasFinder	161788-161814	27	MN693406	Marine virus AFVG_25M259, complete genome	39620-39646	4	0.852
NZ_AP021847_1	1.1\|161788\|27\|NZ_AP021847\|CRISPRCasFinder	161788-161814	27	MN692987	Marine virus AFVG_117M51, complete genome	46665-46691	5	0.815
NZ_AP021847_2	2.24\|730227\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730227-730258	32	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	164923-164954	7	0.781
NZ_AP021847_2	2.26\|730347\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730347-730378	32	NC_021529	Vibrio phage nt-1, complete genome	84717-84748	7	0.781
NZ_AP021847_2	2.37\|731006\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731006-731037	32	NC_012758	Vibrio vulnificus strain MP-4 plasmid pMP1, complete sequence	3871-3902	7	0.781
NZ_AP021847_1	1.1\|161788\|27\|NZ_AP021847\|CRISPRCasFinder	161788-161814	27	NZ_CP040940	Cetia pacifica strain TB6 plasmid unnamed1, complete sequence	74907-74933	8	0.704
NZ_AP021847_2	2.1\|728843\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	728843-728874	32	MN694667	Marine virus AFVG_250M114, complete genome	26655-26686	8	0.75
NZ_AP021847_2	2.1\|728843\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	728843-728874	32	MH809530	Lactobacillus phage Dionysus, complete genome	43347-43378	8	0.75
NZ_AP021847_2	2.11\|729446\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729446-729477	32	NC_006569	Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence	470911-470942	8	0.75
NZ_AP021847_2	2.17\|729807\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729807-729838	32	CAJDJZ010000002	Enterococcus phage vB_EfaH_149 genome assembly, contig: phage149-genome, whole genome shotgun sequence	39643-39674	8	0.75
NZ_AP021847_2	2.27\|730407\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730407-730438	32	NC_019158	Klebsiella pneumoniae plasmid pNDM10469, complete sequence	108083-108114	8	0.75
NZ_AP021847_2	2.38\|731066\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731066-731097	32	NZ_CP053858	Rhizobium pusense strain 76 plasmid pR76, complete sequence	429358-429389	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MN655998	Escherichia phage E26, complete genome	114540-114571	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MH560358	Escherichia virus KFS-EC, complete genome	58805-58836	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MK573636	Escherichia phage vB_EcoM_PHB13, partial genome	120034-120065	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MT764208	Escherichia phage JEP8, complete genome	28966-28997	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MT478991	Escherichia phage vB_EcoM_011D4, complete genome	65569-65600	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MK327941	Escherichia phage vB_EcoM_G37-3, complete genome	116514-116545	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	NC_009821	Enterobacteria phage Phi1, complete genome	114865-114896	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MF327006	Shigella phage Sf20, complete genome	50353-50384	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MK327932	Escherichia phage vB_EcoM_G2248, complete genome	121243-121274	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	NC_025425	Enterobacteria phage GEC-3S complete genome	114407-114438	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MK327947	Escherichia phage vB_EcoM_G5211, complete genome	116566-116597	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	NC_041936	Escherichia phage ECD7, complete genome	117524-117555	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	AY343333	Enterobacteria phage RB49, complete genome	113462-113493	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MK327935	Escherichia phage vB_EcoM_G2494, complete genome	116674-116705	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	NC_012740	Enterobacteria phage JSE, complete genome	118037-118068	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MN850574	Escherichia phage kaaroe, complete genome	155898-155929	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MN850615	Escherichia phage kvi, complete genome	52194-52225	8	0.75
NZ_AP021847_2	2.40\|731186\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731186-731217	32	MN894885	Escherichia virus Ec_Makalu_001, complete genome	113943-113974	8	0.75
NZ_AP021847_2	2.1\|728843\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	728843-728874	32	MG557979	Lactobacillus phage Lpa804, complete genome	15746-15777	9	0.719
NZ_AP021847_2	2.9\|729326\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729326-729357	32	NZ_CP011600	Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence	58071-58102	9	0.719
NZ_AP021847_2	2.9\|729326\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729326-729357	32	NZ_CP026198	Enterobacteriaceae bacterium ENNIH3 plasmid pKPC-c606, complete sequence	32428-32459	9	0.719
NZ_AP021847_2	2.9\|729326\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729326-729357	32	NZ_CP025983	Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence	46398-46429	9	0.719
NZ_AP021847_2	2.9\|729326\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729326-729357	32	NZ_CP026189	Enterobacteriaceae bacterium ENNIH2 plasmid pENT-812c, complete sequence	35380-35411	9	0.719
NZ_AP021847_2	2.16\|729747\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729747-729778	32	NZ_CP030933	Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence	219376-219407	9	0.719
NZ_AP021847_2	2.19\|729927\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729927-729958	32	NZ_CP014876	Lactobacillus backii strain TMW 1.1989 plasmid pL11989-3, complete sequence	6948-6979	9	0.719
NZ_AP021847_2	2.19\|729927\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	729927-729958	32	NZ_CP014902	Lactobacillus backii strain TMW 1.2002 plasmid pL12002-3, complete sequence	430-461	9	0.719
NZ_AP021847_2	2.22\|730107\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730107-730138	32	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	913860-913891	9	0.719
NZ_AP021847_2	2.22\|730107\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730107-730138	32	MH595538	Vibrio phage BONAISHI, complete genome	79142-79173	9	0.719
NZ_AP021847_2	2.33\|730766\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730766-730797	32	MN694791	Marine virus AFVG_250M1163, complete genome	29233-29264	9	0.719
NZ_AP021847_2	2.33\|730766\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730766-730797	32	MN694323	Marine virus AFVG_250M1162, complete genome	29241-29272	9	0.719
NZ_AP021847_2	2.34\|730826\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730826-730857	32	NC_019331	Arthrobacter sp. J3-40 plasmid pJ340-114, complete sequence	12691-12722	9	0.719
NZ_AP021847_2	2.34\|730826\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730826-730857	32	NC_019332	Arthrobacter sp. J3-53 plasmid pJ353-116, complete sequence	40802-40833	9	0.719
NZ_AP021847_2	2.36\|730946\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730946-730977	32	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	923260-923291	9	0.719
NZ_AP021847_2	2.41\|731246\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731246-731277	32	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1566208-1566239	9	0.719
NZ_AP021847_2	2.41\|731246\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731246-731277	32	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	351763-351794	9	0.719
NZ_AP021847_2	2.21\|730047\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730047-730078	32	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	545984-546015	10	0.688
NZ_AP021847_2	2.28\|730467\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730467-730498	32	NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	87886-87917	10	0.688
NZ_AP021847_2	2.29\|730527\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730527-730558	32	NZ_CP025505	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence	57193-57224	10	0.688
NZ_AP021847_2	2.29\|730527\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730527-730558	32	NZ_CP022669	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence	288765-288796	10	0.688
NZ_AP021847_2	2.32\|730706\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730706-730737	32	KT997842	Uncultured Mediterranean phage uvDeep-CGR1-KM17-C101, complete genome	28916-28947	10	0.688
NZ_AP021847_2	2.34\|730826\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730826-730857	32	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	282714-282745	10	0.688
NZ_AP021847_2	2.34\|730826\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730826-730857	32	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	194226-194257	10	0.688
NZ_AP021847_2	2.36\|730946\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	730946-730977	32	MK113949	Phage 5P_1, complete genome	34326-34357	10	0.688
NZ_AP021847_2	2.38\|731066\|32\|NZ_AP021847\|PILER-CR,CRISPRCasFinder,CRT	731066-731097	32	NZ_CP049813	Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence	51395-51426	10	0.688

1. spacer 1.1|161788|27|NZ_AP021847|CRISPRCasFinder matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 3, identity: 0.889

attcttggcaatgaataaaaaat-atac	CRISPR spacer
attcttgacaatcaataaaaaatcata-	Protospacer
*******.**** ********** ***

2. spacer 1.1|161788|27|NZ_AP021847|CRISPRCasFinder matches to MN693406 (Marine virus AFVG_25M259, complete genome) position: , mismatch: 4, identity: 0.852

attcttggcaatgaataaaaaatatac	CRISPR spacer
attcttggcaatgaataaagaaaatgg	Protospacer
*******************.** **.

3. spacer 1.1|161788|27|NZ_AP021847|CRISPRCasFinder matches to MN692987 (Marine virus AFVG_117M51, complete genome) position: , mismatch: 5, identity: 0.815

attcttggcaatgaataaaaaatatac	CRISPR spacer
attcttggcaatgaataataacttgat	Protospacer
****************** ** *  *.

4. spacer 2.24|730227|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

atgaaccacaaggcatggttgaattgcattta	CRISPR spacer
aggatacacaatgcttggttgaattgcatgtg	Protospacer
* **  ***** ** ************** *.

5. spacer 2.26|730347|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 7, identity: 0.781

tctaggcccacttatcgacagtatgttcggat	CRISPR spacer
ccaatgtccacttatcgacagaacgttcggtt	Protospacer
.* * *.************** *.****** *

6. spacer 2.37|731006|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_012758 (Vibrio vulnificus strain MP-4 plasmid pMP1, complete sequence) position: , mismatch: 7, identity: 0.781

-acagtatcagaaagcggcaaagcttgggttaa	CRISPR spacer
tggagtaat-gaaagcggcaatgattgggttaa	Protospacer
 . **** . *********** * *********

7. spacer 1.1|161788|27|NZ_AP021847|CRISPRCasFinder matches to NZ_CP040940 (Cetia pacifica strain TB6 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.704

attcttggcaatgaataaaaaatatac	CRISPR spacer
caatacggcaatgaataaaaaatattt	Protospacer
   . .******************* .

8. spacer 2.1|728843|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN694667 (Marine virus AFVG_250M114, complete genome) position: , mismatch: 8, identity: 0.75

tatttgccgtcatcaccagttggctcttcatc	CRISPR spacer
attgtttcctcatcaccagttgcctgttcatc	Protospacer
  * * .* ************* ** ******

9. spacer 2.1|728843|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MH809530 (Lactobacillus phage Dionysus, complete genome) position: , mismatch: 8, identity: 0.75

tatttgccgtcatcaccagttggctcttcatc	CRISPR spacer
tgtgagtaatcatcaacagttagctcttcatc	Protospacer
*.*  *. .****** *****.**********

10. spacer 2.11|729446|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_006569 (Ruegeria pomeroyi DSS-3 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

atcgtgcgacaaaacggcggctttcacttgtg-	CRISPR spacer
tcagtgagacgaaacggcggctttca-tagcgc	Protospacer
 . *** ***.*************** * *.*

11. spacer 2.17|729807|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to CAJDJZ010000002 (Enterococcus phage vB_EfaH_149 genome assembly, contig: phage149-genome, whole genome shotgun sequence) position: , mismatch: 8, identity: 0.75

gctttattaaattcgacctcaata---acccaccg	CRISPR spacer
tctttattaacttctacctcaatatatacata---	Protospacer
 ********* *** *********   ** .*

12. spacer 2.27|730407|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_019158 (Klebsiella pneumoniae plasmid pNDM10469, complete sequence) position: , mismatch: 8, identity: 0.75

ctgttcagtgtcaaggcggtaatgactcaggc	CRISPR spacer
gtattcagtgacatggcggtaatgactccaat	Protospacer
 *.******* ** ************** ...

13. spacer 2.38|731066|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053858 (Rhizobium pusense strain 76 plasmid pR76, complete sequence) position: , mismatch: 8, identity: 0.75

gcgcgcttgcgggtgatatgctggcacttgcg	CRISPR spacer
tcaccattgcggttgatatgttggcacttgtc	Protospacer
 *.*  ****** *******.*********.

14. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN655998 (Escherichia phage E26, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

15. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MH560358 (Escherichia virus KFS-EC, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

16. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK573636 (Escherichia phage vB_EcoM_PHB13, partial genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

17. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MT764208 (Escherichia phage JEP8, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

18. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MT478991 (Escherichia phage vB_EcoM_011D4, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

19. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK327941 (Escherichia phage vB_EcoM_G37-3, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

20. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_009821 (Enterobacteria phage Phi1, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

21. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MF327006 (Shigella phage Sf20, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

22. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK327932 (Escherichia phage vB_EcoM_G2248, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

23. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_025425 (Enterobacteria phage GEC-3S complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

24. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK327947 (Escherichia phage vB_EcoM_G5211, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

25. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_041936 (Escherichia phage ECD7, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

26. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to AY343333 (Enterobacteria phage RB49, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

27. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK327935 (Escherichia phage vB_EcoM_G2494, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

28. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_012740 (Enterobacteria phage JSE, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

29. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN850574 (Escherichia phage kaaroe, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

30. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN850615 (Escherichia phage kvi, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

31. spacer 2.40|731186|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN894885 (Escherichia virus Ec_Makalu_001, complete genome) position: , mismatch: 8, identity: 0.75

aacccgatgcagatgcaaaatacgcagcagta	CRISPR spacer
aaagcgaagccgatgcaaaatacgcagtaagc	Protospacer
**  *** ** ****************.*.

32. spacer 2.1|728843|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MG557979 (Lactobacillus phage Lpa804, complete genome) position: , mismatch: 9, identity: 0.719

tatttgccgtcatcaccagttggctcttcatc	CRISPR spacer
tgtgaataatcatcaacagttagctcttcatc	Protospacer
*.*  .. .****** *****.**********

33. spacer 2.9|729326|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011600 (Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence) position: , mismatch: 9, identity: 0.719

gtcttcgtctgcattgtctgacatagccacta	CRISPR spacer
atcttcgtcttcattttctgacatgagaacgc	Protospacer
.********* **** ********..  **

34. spacer 2.9|729326|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026198 (Enterobacteriaceae bacterium ENNIH3 plasmid pKPC-c606, complete sequence) position: , mismatch: 9, identity: 0.719

gtcttcgtctgcattgtctgacatagccacta	CRISPR spacer
atcttcgtcttcattttctgacatgagaacgc	Protospacer
.********* **** ********..  **

35. spacer 2.9|729326|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025983 (Enterobacteriaceae bacterium A-F18 plasmid pAF18_1, complete sequence) position: , mismatch: 9, identity: 0.719

gtcttcgtctgcattgtctgacatagccacta	CRISPR spacer
atcttcgtcttcattttctgacatgagaacgc	Protospacer
.********* **** ********..  **

36. spacer 2.9|729326|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026189 (Enterobacteriaceae bacterium ENNIH2 plasmid pENT-812c, complete sequence) position: , mismatch: 9, identity: 0.719

gtcttcgtctgcattgtctgacatagccacta	CRISPR spacer
atcttcgtcttcattttctgacatgagaacgc	Protospacer
.********* **** ********..  **

37. spacer 2.16|729747|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 9, identity: 0.719

aaaaacaacaagccacctatgccg-aagggtat	CRISPR spacer
taaaacaacaagcaacctatgtcgccaaaaca-	Protospacer
 ************ *******.**  *....*

38. spacer 2.19|729927|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014876 (Lactobacillus backii strain TMW 1.1989 plasmid pL11989-3, complete sequence) position: , mismatch: 9, identity: 0.719

aacgaagaacgttcttttactcggttgctaat	CRISPR spacer
ggattagaacgtgcttttactgggttgctatc	Protospacer
..   ******* ******** ******** .

39. spacer 2.19|729927|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014902 (Lactobacillus backii strain TMW 1.2002 plasmid pL12002-3, complete sequence) position: , mismatch: 9, identity: 0.719

aacgaagaacgttcttttactcggttgctaat	CRISPR spacer
ggattagaacgtgcttttactgggttgctatc	Protospacer
..   ******* ******** ******** .

40. spacer 2.22|730107|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 9, identity: 0.719

cttcatcaacggatttgccgatcctgtagtta	CRISPR spacer
cttcatcaacgaacttgccgatctttgcgagg	Protospacer
***********.*.*********.*   *  .

41. spacer 2.22|730107|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MH595538 (Vibrio phage BONAISHI, complete genome) position: , mismatch: 9, identity: 0.719

cttcatcaacggatttgccgatcctgtagtta	CRISPR spacer
cttcatcaacgattttgccgatcatcatgccg	Protospacer
***********. ********** *   *...

42. spacer 2.33|730766|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN694791 (Marine virus AFVG_250M1163, complete genome) position: , mismatch: 9, identity: 0.719

ccctgctctaattgcttgttctcatctatacc	CRISPR spacer
gtctgctctaattgcttactctcataaatgta	Protospacer
 .***************..******  **..

43. spacer 2.33|730766|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MN694323 (Marine virus AFVG_250M1162, complete genome) position: , mismatch: 9, identity: 0.719

ccctgctctaattgcttgttctcatctatacc	CRISPR spacer
gtctgctctaattgcttactctcataaatgta	Protospacer
 .***************..******  **..

44. spacer 2.34|730826|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_019331 (Arthrobacter sp. J3-40 plasmid pJ340-114, complete sequence) position: , mismatch: 9, identity: 0.719

aattgctgcagtaggtgcaatcgtggccgaag	CRISPR spacer
gctggatgcagaaggtgcaatcgcggccgggt	Protospacer
. * * ***** ***********.*****..

45. spacer 2.34|730826|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_019332 (Arthrobacter sp. J3-53 plasmid pJ353-116, complete sequence) position: , mismatch: 9, identity: 0.719

aattgctgcagtaggtgcaatcgtggccgaag	CRISPR spacer
gctggatgcagaaggtgcaatcgcggccgggt	Protospacer
. * * ***** ***********.*****..

46. spacer 2.36|730946|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtcagggttaaaaatgcttgacgttctcgttc	CRISPR spacer
taatgcgttaaacatgcttgatgttctcgatg	Protospacer
    * ****** ********.******* *

47. spacer 2.41|731246|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gagcttgacgcgaatctagatgatgtttatct	CRISPR spacer
ttgcttgacgcgagtttagatgatgaacatac	Protospacer
  ***********.*.*********  .** .

48. spacer 2.41|731246|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.719

gagcttgacgcgaatctagatgatgtttatct	CRISPR spacer
ttgcttgacgcgagtttagatgatgaacatac	Protospacer
  ***********.*.*********  .** .

49. spacer 2.21|730047|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.688

tacttcattgcgtagagatagtatttcgaaca	CRISPR spacer
accttcattgcgtagcgatagaatttgctgtc	Protospacer
  ************* ***** ****   ..

50. spacer 2.28|730467|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046723 (Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence) position: , mismatch: 10, identity: 0.688

actgcggcaagaactgaacgcaacaagctaaa	CRISPR spacer
gttgcggcatggactgaacgcaacagcccgct	Protospacer
..******* *.*************. *..

51. spacer 2.29|730527|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025505 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvC, complete sequence) position: , mismatch: 10, identity: 0.688

atgcaagagcaaaacacgcagctaatacaaca	CRISPR spacer
gagcaagagcacagcacgcagctaagctctct	Protospacer
. ********* *.***********  .  *

52. spacer 2.29|730527|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022669 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR4, complete sequence) position: , mismatch: 10, identity: 0.688

atgcaagagcaaaacacgcagctaatacaaca	CRISPR spacer
gagcaagagcacagcacgcagctaagctctct	Protospacer
. ********* *.***********  .  *

53. spacer 2.32|730706|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to KT997842 (Uncultured Mediterranean phage uvDeep-CGR1-KM17-C101, complete genome) position: , mismatch: 10, identity: 0.688

gggtgtaaacttgtgtgttaggcactttttta	CRISPR spacer
gtctgtaaatttgtttgttaggcactaaagcc	Protospacer
*  ******.**** ***********    .

54. spacer 2.34|730826|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 10, identity: 0.688

aattgctgcagtaggtgcaatcgtggccgaag	CRISPR spacer
tgtagctgcagtaggtgcattcatggcattta	Protospacer
 .* *************** **.****    .

55. spacer 2.34|730826|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aattgctgcagtaggtgcaatcgtggccgaag	CRISPR spacer
tgtagctgcagtaggtgcattcatggcattta	Protospacer
 .* *************** **.****    .

56. spacer 2.36|730946|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to MK113949 (Phage 5P_1, complete genome) position: , mismatch: 10, identity: 0.688

gtcagggttaaaaatgcttgacgttctcgttc	CRISPR spacer
agacgcgtgaaaaatggttgacgttctcgaag	Protospacer
.   * ** ******* ************

57. spacer 2.38|731066|32|NZ_AP021847|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

gcgcgcttgcgggtgatatgctggcacttgcg	CRISPR spacer
acgcgcttgagggtgatatgccggttggcgtt	Protospacer
.******** ***********.**.   .*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 6489

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087618.1\|1326_2346_-	arginine N-succinyltransferase	NA	NA	NA	NA
WP_152087619.1\|2386_3613_-	acetylornithine/succinyldiaminopimelate transaminase	A0A1V0SKB7	Klosneuvirus	1.5e-24	26.9
WP_152087620.1\|3776_4205_+	Lrp/AsnC ligand binding domain-containing protein	NA	NA	NA	NA
WP_152087621.1\|5130_6489_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	7.5e-57	37.1

DBSCAN-SWA_2

14727 : 18398

Shigella_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087630.1\|14727_15006_+\|transposase	transposase	U5P4I9	Shigella_phage	6.0e-14	51.7
WP_152087631.1\|16345_17170_-	hypothetical protein	NA	NA	NA	NA
WP_172971662.1\|17171_18398_-	DUF3644 domain-containing protein	A0A220NQR4	Corynebacterium_phage	3.2e-22	27.5

DBSCAN-SWA_3

27222 : 29706

Iris_mild_mosaic_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087639.1\|27222_29706_+	glycogen/starch/alpha-glucan family phosphorylase	Q8B3H5	Iris_mild_mosaic_virus	1.6e-17	44.3

DBSCAN-SWA_4

36477 : 41134

Pelagibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087645.1\|36477_36951_+	redoxin family protein	M1I839	Pelagibacter_phage	1.9e-23	48.2
WP_152087646.1\|37007_38009_+	fatty acid desaturase	NA	NA	NA	NA
WP_152087647.1\|38077_41134_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	9.9e-49	21.4

DBSCAN-SWA_5

44231 : 47849

Sinorhizobium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087652.1\|44231_44855_+	sigma-70 family RNA polymerase sigma factor	A0A0F6TH34	Sinorhizobium_phage	1.2e-06	31.4
WP_152087653.1\|44847_45498_+	cupin domain-containing protein	NA	NA	NA	NA
WP_152087654.1\|45510_46467_+	DUF1722 domain-containing protein	NA	NA	NA	NA
WP_152087655.1\|46466_47849_+	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	1.6e-62	31.4

DBSCAN-SWA_6

50970 : 55476

Orpheovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087659.1\|50970_52233_+	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	2.0e-51	33.6
WP_152087660.1\|52195_52705_+	DUF2878 family protein	NA	NA	NA	NA
WP_152087661.1\|52915_53191_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	3.6e-19	56.2
WP_070992770.1\|53254_53752_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_152087662.1\|53751_55476_-	acetolactate synthase 3 large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	7.3e-57	29.8

DBSCAN-SWA_7

59269 : 62963

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087666.1\|59269_60058_-	flap endonuclease Xni	A0A068EMT4	Bacillus_phage	4.2e-12	26.8
WP_152087667.1\|60054_61398_-	DUF3412 domain-containing protein	NA	NA	NA	NA
WP_152087668.1\|61412_62963_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.2e-18	37.8

DBSCAN-SWA_8

70463 : 72431

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087675.1\|70463_72431_-	FAD-dependent oxidoreductase	A0A2K9L5D8	Tupanvirus	1.2e-10	21.9

DBSCAN-SWA_9

89231 : 100102

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087689.1\|89231_91121_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	8.6e-27	37.3
WP_152087690.1\|91555_92824_-	glucose/galactose MFS transporter	NA	NA	NA	NA
WP_152087691.1\|92937_93834_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_152087692.1\|93985_95479_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	6.9e-80	35.8
WP_152087693.1\|95491_97492_+	urocanate hydratase	NA	NA	NA	NA
WP_152087694.1\|97568_98075_-	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_152087695.1\|98143_100102_-	histidine kinase	A0A1V0SGX0	Hokovirus	4.4e-10	25.2

DBSCAN-SWA_10

113473 : 116107

Hepacivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087708.1\|113473_115126_-	long-chain-fatty-acid--CoA ligase FadD	Q75ZG1	Hepacivirus	5.0e-47	29.0
WP_172971666.1\|115246_116107_-	alpha/beta hydrolase	A0A023W6C9	Mycobacterium_phage	2.2e-06	27.2

DBSCAN-SWA_11

120818 : 122729

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087712.1\|120818_122729_-	DEAD/DEAH box helicase	A0A127AW80	Bacillus_phage	2.1e-89	30.7

DBSCAN-SWA_12

128317 : 132985

Klosneuvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087719.1\|128317_129052_+	tryptophan synthase subunit alpha	A0A1V0SIZ6	Klosneuvirus	1.4e-09	25.0
WP_152087720.1\|129033_129813_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_152087721.1\|129803_130421_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA
WP_152087722.1\|130664_131435_+	glycosyltransferase family 25 protein	A0A1S5NQ44	Burkholderia_phage	2.3e-15	23.8
WP_152087723.1\|131550_132051_+	hypothetical protein	NA	NA	NA	NA
WP_152087724.1\|132043_132277_+	helix-turn-helix domain-containing protein	A0A142LP09	Marinitoga_camini_virus	8.7e-06	39.4
WP_152087725.1\|132364_132985_+	peptidoglycan DD-metalloendopeptidase family protein	A0A222YWR8	Streptomyces_phage	1.1e-10	34.7

DBSCAN-SWA_13

136357 : 138007

Neodiprion_lecontei_nucleopolyhedrovirus(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087729.1\|136357_138007_+\|protease	trypsin-like serine protease	Q6JPG5	Neodiprion_lecontei_nucleopolyhedrovirus	3.0e-20	33.9

DBSCAN-SWA_14

144719 : 146018

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087734.1\|144719_146018_-	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	2.2e-50	33.8

DBSCAN-SWA_15

151061 : 152678

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087741.1\|151061_152678_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	6.4e-47	41.5

DBSCAN-SWA_16

164798 : 167987

Yellowstone_lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087752.1\|164798_165932_-	molecular chaperone DnaJ	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	8.8e-27	36.4
WP_152087753.1\|166061_167987_-	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.8e-147	49.1

DBSCAN-SWA_17

173108 : 175991

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087759.1\|173108_175991_-	insulinase family protein	A0A1V0SJA4	Klosneuvirus	1.5e-70	25.6

DBSCAN-SWA_18

180577 : 181438

Heliothis_virescens_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087764.1\|180577_181438_+	S1/P1 Nuclease	A4KXI8	Heliothis_virescens_ascovirus	1.0e-06	24.9

DBSCAN-SWA_19

200119 : 200842

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087780.1\|200119_200842_+	short-chain dehydrogenase	Q56AQ6	Bacillus_thuringiensis_phage	8.9e-41	40.5

DBSCAN-SWA_20

220367 : 220631

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087792.1\|220367_220631_-	hypothetical protein	A0A1B0Z0G5	Vibrio_phage	2.7e-11	55.6

DBSCAN-SWA_21

224955 : 229906

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087798.1\|224955_226323_-	leucyl aminopeptidase family protein	Q6GYZ8	Mycoplasma_phage	9.3e-31	32.6
WP_152087799.1\|226387_226753_-	hypothetical protein	NA	NA	NA	NA
WP_152087800.1\|226842_227004_+	hypothetical protein	NA	NA	NA	NA
WP_152087801.1\|227263_229906_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.8e-14	22.1

DBSCAN-SWA_22

233405 : 235382

Citrobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087805.1\|233405_234002_-	thymidine kinase	A0A2H4YFP5	Citrobacter_phage	2.3e-55	57.5
WP_152087806.1\|234062_234779_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_172971670.1\|234917_235382_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.5e-28	42.7

DBSCAN-SWA_23

238563 : 257359

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087810.1\|238563_241695_+	CusA/CzcA family heavy metal efflux RND transporter	S5VTK5	Leptospira_phage	8.5e-72	25.1
WP_152087811.1\|241910_242378_+	bacterioferritin	NA	NA	NA	NA
WP_152087812.1\|242387_242852_+	bacterioferritin	NA	NA	NA	NA
WP_152087813.1\|242906_243101_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_152087814.1\|243499_248002_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	1.4e-11	31.7
WP_152087815.1\|248074_250837_-	response regulator	A0A1V0SGX0	Hokovirus	1.7e-47	32.6
WP_152087816.1\|250977_251868_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_152087817.1\|251999_252479_-	GAF domain-containing protein	NA	NA	NA	NA
WP_152087818.1\|252550_257359_+	response regulator	A0A1V0SGX0	Hokovirus	1.8e-41	27.1

DBSCAN-SWA_24

282579 : 289798

Cafeteria_roenbergensis_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087838.1\|282579_284649_-	peptidase M13	E3T4I7	Cafeteria_roenbergensis_virus	1.5e-88	32.7
WP_152087839.1\|285008_285962_+	paraslipin	A0A1V0SB59	Catovirus	5.1e-20	35.1
WP_152087840.1\|285966_286419_+	NfeD family protein	NA	NA	NA	NA
WP_172971673.1\|287060_287219_+	hypothetical protein	NA	NA	NA	NA
WP_152087841.1\|287246_287807_+	hypothetical protein	A0A1L5C275	Pseudoalteromonas_phage	7.9e-21	32.0
WP_152088276.1\|288154_289798_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	9.4e-22	40.9

DBSCAN-SWA_25

294714 : 298494

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087845.1\|294714_296289_-	alkyl hydroperoxide reductase subunit F	G3MA85	Bacillus_virus	4.3e-40	33.4
WP_152087846.1\|296358_296928_-	peroxiredoxin	NA	NA	NA	NA
WP_152087847.1\|297189_297615_+	DUF3429 family protein	NA	NA	NA	NA
WP_152087848.1\|297681_298494_+	diguanylate cyclase	G3MA91	Bacillus_virus	1.1e-07	29.5

DBSCAN-SWA_26

318302 : 319310

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087863.1\|318302_319310_-	substrate-binding domain-containing protein	C6ZCU4	Enterobacteria_phage	1.1e-12	25.5

DBSCAN-SWA_27

327973 : 333504

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087869.1\|327973_330133_-	VRR-NUC domain-containing protein	A0A1X9I5C8	Streptococcus_phage	9.2e-25	38.4
WP_152087870.1\|330186_333504_-	response regulator	A0A1V0SGX0	Hokovirus	1.3e-57	31.3

DBSCAN-SWA_28

344974 : 352712

Salmonella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088281.1\|344974_346738_-	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	7.0e-15	42.4
WP_152087883.1\|347079_347994_-	DUF4350 domain-containing protein	NA	NA	NA	NA
WP_152087884.1\|348039_348744_-	hypothetical protein	NA	NA	NA	NA
WP_172971677.1\|348824_352712_-	GAF domain-containing protein	Q8QKW6	Ectocarpus_siliculosus_virus	8.5e-05	23.2

DBSCAN-SWA_29

361316 : 366114

Feldmannia_species_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087890.1\|361316_364007_+	PAS domain-containing protein	B5LWN0	Feldmannia_species_virus	5.3e-14	24.3
WP_152087891.1\|364009_364426_+	response regulator	NA	NA	NA	NA
WP_152087892.1\|364418_365339_+	diguanylate cyclase	G3MA91	Bacillus_virus	1.6e-18	32.8
WP_152087893.1\|365496_366114_-	repressor LexA	A0A291AWY9	Escherichia_phage	2.8e-11	43.3

DBSCAN-SWA_30

376640 : 385935

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087901.1\|376640_377345_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-32	38.4
WP_152087902.1\|377386_378643_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_152087903.1\|379309_381394_+	AMP-binding protein	A0A2K9KZV5	Tupanvirus	8.9e-09	21.3
WP_152087904.1\|381387_381660_+	acyl carrier protein	NA	NA	NA	NA
WP_152087905.1\|381656_382766_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_152087906.1\|382778_384389_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	G9E4Q1	Emiliania_huxleyi_virus	9.8e-48	29.7
WP_152087907.1\|384399_385935_+	AMP-binding protein	A0A2K9L3I8	Tupanvirus	3.9e-38	25.6

DBSCAN-SWA_31

389280 : 392106

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087910.1\|389280_392106_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	A0A1V0SKB7	Klosneuvirus	4.4e-11	24.8

DBSCAN-SWA_32

396615 : 402270

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087915.1\|396615_397320_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.3e-40	40.9
WP_152087916.1\|397321_398515_+	hypothetical protein	NA	NA	NA	NA
WP_152087917.1\|398523_399540_+	methyltransferase	NA	NA	NA	NA
WP_152087918.1\|399567_402270_+	phosphoesterase	A0A1V0SGR7	Hokovirus	6.5e-28	32.5

DBSCAN-SWA_33

405511 : 406978

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087923.1\|405511_406978_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A1X9I5H2	Streptococcus_phage	3.7e-17	22.9

DBSCAN-SWA_34

413260 : 417022

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087930.1\|413260_413959_+	WYL domain-containing protein	A0A1B0RXM1	Streptococcus_phage	1.6e-18	29.1
WP_152087931.1\|414260_414863_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_152087932.1\|415017_415821_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152087933.1\|416116_417022_+	diguanylate cyclase	G3MA91	Bacillus_virus	7.3e-16	34.4

DBSCAN-SWA_35

421290 : 425154

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087938.1\|421290_425154_+	TOMM system kinase/cyclase fusion protein	A0A1V0SBL0	Catovirus	9.7e-17	26.3

DBSCAN-SWA_36

434056 : 436009

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087948.1\|434056_436009_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	2.2e-17	30.3

DBSCAN-SWA_37

471751 : 477783

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087969.1\|471751_473770_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	3.4e-29	30.8
WP_172971682.1\|474406_475372_-	hypothetical protein	NA	NA	NA	NA
WP_152087971.1\|475272_476196_-	hypothetical protein	NA	NA	NA	NA
WP_152087972.1\|476310_477783_-	FAD-dependent oxidoreductase	A0A2K9L3H9	Tupanvirus	5.9e-23	25.5

DBSCAN-SWA_38

484303 : 486304

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087979.1\|484303_486304_-	RecQ family ATP-dependent DNA helicase	F2NZ48	Diadromus_pulchellus_ascovirus	3.4e-58	39.6

DBSCAN-SWA_39

489406 : 498127

Orgyia_leucostigma_nucleopolyhedrovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087982.1\|489406_491866_-	chitinase	B0FDP2	Orgyia_leucostigma_nucleopolyhedrovirus	5.5e-151	49.1
WP_152087983.1\|491983_493420_-	lytic polysaccharide monooxygenase	D7F5S3	Apocheima_cinerarium_nucleopolyhedrovirus	7.0e-29	34.4
WP_152087984.1\|493464_496590_-	chitinase C-terminal domain-containing protein	A0A2K9KZQ8	Tupanvirus	2.8e-30	27.3
WP_152087985.1\|497167_498127_-	GHKL domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	3.8e-07	34.3

DBSCAN-SWA_40

501191 : 508015

Leptospira_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152087989.1\|501191_504368_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	6.5e-43	19.3
WP_152087990.1\|504364_505702_-	hypothetical protein	NA	NA	NA	NA
WP_152087991.1\|505703_506354_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_152087992.1\|506464_508015_-	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	2.9e-41	52.2

DBSCAN-SWA_41

522266 : 524435

Organic_Lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088008.1\|522266_524435_-	prolyl oligopeptidase family serine peptidase	F2Y2Z7	Organic_Lake_phycodnavirus	1.2e-32	24.8

DBSCAN-SWA_42

536877 : 538545

Klosneuvirus(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088019.1\|536877_538545_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	1.4e-49	28.9

DBSCAN-SWA_43

550929 : 552042

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088027.1\|550929_552042_+	linear amide C-N hydrolase	A0A1J0F9I3	Only_Syngen_Nebraska_virus	7.3e-18	29.2

DBSCAN-SWA_44

576303 : 579231

Mollivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088053.1\|576303_577068_+	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	3.5e-11	28.6
WP_152088054.1\|577207_578212_-	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	5.4e-36	35.8
WP_152088289.1\|578322_579231_+	histone deacetylase	A0A1V0SJS0	Klosneuvirus	1.5e-05	27.9

DBSCAN-SWA_45

585956 : 586586

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088062.1\|585956_586586_+	uridine kinase	A0A2K9L505	Tupanvirus	1.2e-30	36.2

DBSCAN-SWA_46

611734 : 613540

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088082.1\|611734_613540_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.2e-09	46.3

DBSCAN-SWA_47

634364 : 634574

Lactococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070986022.1\|634364_634574_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-17	67.2

DBSCAN-SWA_48

640830 : 644255

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088293.1\|640830_642096_-	two-component sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	2.8e-05	27.6
WP_152088112.1\|642148_642805_-	response regulator	NA	NA	NA	NA
WP_152088113.1\|642801_643455_-	hypothetical protein	NA	NA	NA	NA
WP_152088114.1\|643451_644255_-	SDR family oxidoreductase	F2NZ12	Diadromus_pulchellus_ascovirus	7.1e-07	29.4

DBSCAN-SWA_49

650692 : 651100

Phage_NCTB(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088121.1\|650692_651100_-	phosphate ABC transporter substrate-binding protein	A0A1C3NFG2	Phage_NCTB	5.8e-05	40.3

DBSCAN-SWA_50

655020 : 655734

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088124.1\|655020_655734_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.2e-36	44.1

DBSCAN-SWA_51

660256 : 662140

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088130.1\|660256_662140_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.1e-25	28.2

DBSCAN-SWA_52

667332 : 685885

Tupanvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088135.1\|667332_670011_+	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	2.2e-28	33.5
WP_152088136.1\|670046_673115_+	PAS domain S-box protein	A0A1V0SL97	Klosneuvirus	5.3e-50	43.2
WP_152088137.1\|673218_675027_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	1.1e-66	31.8
WP_152088138.1\|675303_676554_-	sensor histidine kinase	B5LWN0	Feldmannia_species_virus	1.2e-05	24.2
WP_152088139.1\|676560_677265_-	response regulator	NA	NA	NA	NA
WP_152088140.1\|677402_678077_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-25	38.3
WP_172971688.1\|678066_680565_+	hypothetical protein	NA	NA	NA	NA
WP_152088142.1\|680615_682895_-	aminotransferase class V-fold PLP-dependent enzyme	A0A1X7C038	Faustovirus	1.5e-22	27.3
WP_152088143.1\|683201_685082_+	S8 family serine peptidase	A0A2K9L199	Tupanvirus	3.4e-31	44.7
WP_152088144.1\|685411_685885_-	VOC family protein	A0A2K9L1J4	Tupanvirus	1.0e-24	43.2

DBSCAN-SWA_53

688946 : 696322

Bathycoccus_sp._RCC1105_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088296.1\|688946_690173_+	hypothetical protein	E5ERA2	Bathycoccus_sp._RCC1105_virus	5.4e-46	29.7
WP_152088148.1\|691097_693950_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.4e-41	25.9
WP_172971689.1\|694748_694901_-	hypothetical protein	NA	NA	NA	NA
WP_152088150.1\|695293_696322_+	hypothetical protein	A0A224ATG2	Bombyx_mori_nuclear_polyhedrosis_virus	4.8e-16	26.9

DBSCAN-SWA_54

713251 : 720461

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088164.1\|713251_714916_-	cache domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-24	39.1
WP_152088165.1\|714912_715776_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_152088166.1\|715822_718441_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.5e-32	23.7
WP_152088167.1\|718857_719754_-	hypothetical protein	NA	NA	NA	NA
WP_152088168.1\|719741_720461_-	hypothetical protein	A0A1U9WQS3	Geobacillus_phage	8.0e-26	35.6

DBSCAN-SWA_55

723621 : 725217

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088172.1\|723621_725217_+	ATP-binding cassette domain-containing protein	A0A1V0SGN0	Hokovirus	3.9e-20	25.7

DBSCAN-SWA_56

732117 : 739841

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088177.1\|732117_733146_-	type I-F CRISPR-associated protein Csy3	A0A2D0YRR8	Vibrio_phage	1.2e-43	35.5
WP_152088178.1\|733182_734121_-	type I-F CRISPR-associated protein Csy2	A0A2I7RCX5	Vibrio_phage	5.4e-06	22.0
WP_152088179.1\|734117_735410_-	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA
WP_152088180.1\|735456_738867_-	type I-F CRISPR-associated helicase Cas3	A0A2I7RCU8	Vibrio_phage	3.9e-102	29.7
WP_152088181.1\|738863_739841_-	type I-F CRISPR-associated endonuclease Cas1	A0A2D0YFC9	Vibrio_phage	1.5e-51	37.8

DBSCAN-SWA_57

744117 : 744846

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088186.1\|744117_744846_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-38	38.9

DBSCAN-SWA_58

755421 : 762982

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088195.1\|755421_756633_+	exonuclease subunit SbcD	A0A217ER54	Bacillus_phage	2.7e-10	25.7
WP_152088196.1\|756629_760292_+	AAA family ATPase	A0A0E3HXG6	Synechococcus_phage	6.2e-05	24.1
WP_152088197.1\|760291_760957_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_152088198.1\|760928_761312_-	response regulator	NA	NA	NA	NA
WP_152088199.1\|761354_761882_-	hypothetical protein	NA	NA	NA	NA
WP_152088200.1\|761878_762331_-	YaiI/YqxD family protein	NA	NA	NA	NA
WP_152088201.1\|762436_762982_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	2.2e-36	42.9

DBSCAN-SWA_59

772325 : 779862

Klosneuvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088207.1\|772325_774479_-	M3 family peptidase	A0A1V0SID3	Klosneuvirus	9.1e-41	25.2
WP_152088208.1\|774671_775244_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_152088209.1\|775514_778949_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	3.1e-43	30.5
WP_152088210.1\|778950_779862_-	diguanylate cyclase	A0A220YL79	Alteromonas_virus	1.3e-09	29.9

DBSCAN-SWA_60

783186 : 784125

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088214.1\|783186_784125_-	class I SAM-dependent methyltransferase	W6LLI2	Streptococcus_phage	1.5e-19	31.5

DBSCAN-SWA_61

789904 : 790303

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088221.1\|789904_790303_+	fosfomycin resistance glutathione transferase	Q2LI91	Bacillus_phage	8.1e-12	38.8

DBSCAN-SWA_62

793834 : 797015

Bacillus_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088225.1\|793834_794530_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.3e-32	38.9
WP_152088226.1\|794673_795087_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_152088227.1\|795064_796318_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	5.2e-20	27.2
WP_152088228.1\|796325_797015_-	response regulator	W8CYM9	Bacillus_phage	3.9e-38	38.1

DBSCAN-SWA_63

814750 : 823073

Alteromonas_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088241.1\|814750_816193_-	DNA recombination protein RmuC	R9RFD7	Alteromonas_phage	1.9e-05	47.2
WP_152088242.1\|816371_817049_-	response regulator	W8CYM9	Bacillus_phage	8.6e-30	33.8
WP_152088243.1\|817057_817261_-	hypothetical protein	NA	NA	NA	NA
WP_152088244.1\|817600_820699_-	DEAD/DEAH box helicase family protein	S5GFU2	Autographa_californica_nuclear_polyhedrosis_virus	1.8e-50	29.3
WP_152088245.1\|820862_821825_-	transcriptional regulator	Q6UAV8	Klebsiella_phage	2.7e-13	24.7
WP_152088246.1\|821843_823073_-	AAA family ATPase	A0A077SL49	Escherichia_phage	2.1e-18	27.5

DBSCAN-SWA_64

829377 : 831753

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088251.1\|829377_831753_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	5.3e-183	38.7

DBSCAN-SWA_65

843007 : 844483

Organic_Lake_phycodnavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152088261.1\|843007_844483_-	deoxyribodipyrimidine photo-lyase	F2Y1K1	Organic_Lake_phycodnavirus	4.8e-25	23.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP021846

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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2. NZ_AP021847

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection