CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045049	Lactobacillus reuteri strain reuteri chromosome, complete genome	0 crisprs	RT,cas14j,cas3,DEDDh,DinG,PrimPol,csa3	0	0	9	0
NZ_CP045050	Lactobacillus reuteri strain reuteri plasmid pLTR1318, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

235346 : 290631

Klosneuvirus(11.76%)

protease,tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013924000.1\|235346_236765_+\|transposase	ISLre2-like element ISLre2 family transposase	NA	NA	NA	NA
WP_011953380.1\|236913_238386_+	amino acid permease	NA	NA	NA	NA
WP_003667171.1\|238339_239710_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	2.7e-22	25.6
WP_003667172.1\|239992_241162_+	cation:proton antiporter	NA	NA	NA	NA
WP_003667173.1\|241174_243493_+	AAA family ATPase	NA	NA	NA	NA
WP_003667174.1\|243580_244024_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.9e-26	45.2
WP_003667175.1\|244075_245035_-	site-specific DNA-methyltransferase	A0A0H3UZ66	Geobacillus_virus	2.5e-14	28.2
WP_003667176.1\|245312_246335_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_003667177.1\|246478_247420_+	Ppx/GppA family phosphatase	NA	NA	NA	NA
WP_003667179.1\|247412_248675_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_003667180.1\|248667_249627_+	hypothetical protein	NA	NA	NA	NA
WP_003667181.1\|249632_250331_+	NAD-dependent protein deacylase	S5M4R0	Bacillus_phage	2.7e-18	30.4
WP_011953383.1\|250779_251628_+	DUF72 domain-containing protein	NA	NA	NA	NA
WP_003667184.1\|251705_253733_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.1e-91	36.6
WP_003667185.1\|253725_254544_+	TatD family deoxyribonuclease	NA	NA	NA	NA
WP_003667186.1\|254540_255107_+	ribonuclease M5	NA	NA	NA	NA
WP_003667187.1\|255099_255993_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003665581.1\|256083_256326_+	DUF1021 domain-containing protein	NA	NA	NA	NA
WP_003667188.1\|256511_257363_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_003667189.1\|257502_258414_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003667190.1\|258421_259093_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.3e-13	30.2
WP_003667191.1\|259092_259890_+	metal ABC transporter permease	NA	NA	NA	NA
WP_003667193.1\|260121_260967_+	pur operon repressor	NA	NA	NA	NA
WP_003667195.1\|260970_262338_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	5.4e-31	36.6
WP_003667197.1\|262412_263402_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	6.5e-42	34.2
WP_003667199.1\|263577_264315_+	hypothetical protein	NA	NA	NA	NA
WP_003667200.1\|264393_265215_-	sugar-phosphatase	NA	NA	NA	NA
WP_003667202.1\|265214_266582_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	4.3e-28	31.4
WP_003667203.1\|266583_267408_-	ligase	NA	NA	NA	NA
WP_130125636.1\|267605_268016_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	5.2e-46	62.6
WP_152111078.1\|268015_269191_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	1.3e-118	55.4
WP_003667208.1\|269417_269816_+	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_003667209.1\|269849_270419_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_003667210.1\|270594_272199_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.3e-148	50.9
WP_003666987.1\|272711_274094_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.0e-29	26.8
WP_003667214.1\|274377_275655_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_003665599.1\|275747_275993_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_003666987.1\|276499_277882_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.0e-29	26.8
WP_011953387.1\|278064_279381_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_003667221.1\|279364_280255_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003667224.1\|280304_281009_+	class A sortase	NA	NA	NA	NA
WP_003664118.1\|281358_281817_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_152111080.1\|281956_282157_-	hypothetical protein	NA	NA	NA	NA
WP_003667227.1\|282178_282958_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_003667230.1\|282969_283836_+	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA
WP_003667231.1\|283855_284512_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_003667233.1\|284550_285015_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_003667234.1\|285144_285714_+	LemA family protein	NA	NA	NA	NA
WP_003667235.1\|285716_286613_+\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_152111082.1\|286766_288146_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_003667239.1\|288217_289714_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	3.4e-71	39.0
WP_003667241.1\|289794_290631_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	6.5e-27	32.4

DBSCAN-SWA_2

788464 : 852651

Lactobacillus_phage(15.0%)

tRNA,integrase,transposase

attL 820353:820412|attR 851124:852693

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003668169.1\|788464_790330_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	1.1e-135	46.6
WP_003665811.1\|790458_791610_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.3e-30	27.1
WP_003668167.1\|791740_793576_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	4.3e-23	25.9
WP_003668165.1\|793726_794887_-\|integrase	site-specific integrase	A0A2I7SCV1	Paenibacillus_phage	8.0e-84	43.6
WP_003668163.1\|795010_795745_-	hypothetical protein	U5U717	Lactobacillus_phage	1.1e-38	38.0
WP_003668162.1\|795749_795986_+	hypothetical protein	U5U783	Lactobacillus_phage	1.8e-14	53.4
WP_003668161.1\|796037_796487_-	hypothetical protein	NA	NA	NA	NA
WP_003668160.1\|796585_797044_-	hypothetical protein	NA	NA	NA	NA
WP_003668159.1\|797218_797479_-	S24 family peptidase	U3PIS7	Lactobacillus_phage	4.8e-13	60.9
WP_080502980.1\|797506_797668_-	hypothetical protein	A0A2I6PDG6	Staphylococcus_phage	1.4e-10	65.9
WP_152111102.1\|798088_799504_+	C69 family dipeptidase	NA	NA	NA	NA
WP_011953435.1\|799576_800653_+	Ldh family oxidoreductase	NA	NA	NA	NA
WP_003665815.1\|800886_801846_-	L-lactate dehydrogenase	NA	NA	NA	NA
WP_003668154.1\|801952_802132_-	hypothetical protein	NA	NA	NA	NA
WP_011953436.1\|802295_802634_+	hypothetical protein	NA	NA	NA	NA
WP_003668152.1\|802711_803671_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_003668151.1\|803671_804412_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_003668150.1\|804490_804826_+	hypothetical protein	NA	NA	NA	NA
WP_152111104.1\|804844_807082_+	RelA/SpoT family protein	A0A1V0SJX2	Klosneuvirus	1.1e-12	41.7
WP_011953438.1\|807092_807530_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003668147.1\|807687_808536_-	phosphotransferase	NA	NA	NA	NA
WP_003668146.1\|808917_810720_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_003664118.1\|810948_811407_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003668144.1\|811546_812290_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-31	40.6
WP_003668141.1\|812279_813791_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_003665847.1\|814091_814283_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_003668138.1\|814342_814789_+	GatB/YqeY domain-containing protein	A0A248SJP2	Salicola_phage	4.0e-07	27.8
WP_152111106.1\|814908_815886_+	linear amide C-N hydrolase	A0A2K9L5Y5	Tupanvirus	6.4e-18	26.2
WP_011953439.1\|816045_817278_+	argininosuccinate synthase	NA	NA	NA	NA
WP_003668134.1\|817267_818653_+	argininosuccinate lyase	NA	NA	NA	NA
WP_003668133.1\|818781_819354_+	biotin transporter BioY	NA	NA	NA	NA
WP_011953440.1\|819359_820331_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
820353:820412	attL	NA	NA	NA	NA
WP_013924000.1\|820461_821880_+\|transposase	ISLre2-like element ISLre2 family transposase	NA	NA	NA	NA
WP_003668131.1\|822008_823016_+	PhoH family protein	H6X2N1	Pseudomonas_phage	8.6e-50	48.4
WP_003665856.1\|823015_823495_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_003665857.1\|823478_823874_+	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_003668129.1\|823885_824791_+	GTPase Era	NA	NA	NA	NA
WP_003668128.1\|824806_825592_+	DNA repair protein RecO	NA	NA	NA	NA
WP_003668127.1\|825852_826839_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_003668126.1\|826840_828916_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003668125.1\|829050_830916_+	DNA primase	I6P4U6	Helicobacter_phage	4.6e-49	34.2
WP_003668124.1\|830917_832060_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	2.5e-37	36.6
WP_003668123.1\|832257_833442_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_035167555.1\|833511_834930_-\|transposase	ISLre2-like element ISLre2 family transposase	NA	NA	NA	NA
WP_003668122.1\|835109_835826_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_003668121.1\|835812_836637_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_011953442.1\|836661_837912_+	peptidase T	NA	NA	NA	NA
WP_003668118.1\|837953_838196_-	YjzD family protein	NA	NA	NA	NA
WP_003668117.1\|838278_841626_+	DNA polymerase III subunit alpha	R4TB75	Streptomyces_phage	2.6e-151	33.2
WP_003665875.1\|841811_843233_+	pyruvate kinase	NA	NA	NA	NA
WP_003668116.1\|843374_844256_+	S1 RNA-binding protein	NA	NA	NA	NA
WP_003665877.1\|844255_845149_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	1.5e-21	24.6
WP_003668115.1\|845162_845519_+	hypothetical protein	NA	NA	NA	NA
WP_003668114.1\|845511_846303_+	segregation/condensation protein A	NA	NA	NA	NA
WP_003668113.1\|846265_846871_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.1e-11	28.5
WP_003668112.1\|846870_847587_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_102816116.1\|847940_848558_+	ECF transporter S component	NA	NA	NA	NA
WP_003673247.1\|848659_849685_+	hypothetical protein	NA	NA	NA	NA
WP_003668109.1\|849674_851114_+	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	9.7e-63	39.8
WP_013924000.1\|851232_852651_+\|transposase	ISLre2-like element ISLre2 family transposase	NA	NA	NA	NA
851124:852693	attR	NA	NA	NA	NA

DBSCAN-SWA_3

857185 : 865250

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003666054.1\|857185_857461_+	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	2.6e-25	68.5
WP_011953444.1\|857596_858862_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_003668104.1\|858987_860199_+\|tRNA	CCA tRNA nucleotidyltransferase	G3MAR3	Bacillus_virus	3.8e-36	39.7
WP_003668103.1\|860200_862111_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.4e-56	30.4
WP_003668102.1\|862129_863092_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	2.5e-115	61.2
WP_003666061.1\|863107_863596_+	dihydrofolate reductase	A0A1B2IBQ4	Erwinia_phage	4.3e-23	40.8
WP_003666062.1\|863584_864229_-	hemolysin III family protein	NA	NA	NA	NA
WP_003668100.1\|864407_865250_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	2.3e-16	33.3

DBSCAN-SWA_4

1005080 : 1170532

141

Bacillus_phage(24.24%)

tRNA,integrase,transposase

attL 1025069:1025128|attR 1032323:1034153

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152111137.1\|1005080_1005959_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_003688751.1\|1005982_1006270_-\|transposase	transposase	NA	NA	NA	NA
WP_080502969.1\|1006560_1006911_-\|integrase	tyrosine-type recombinase/integrase	E9LUK6	Lactobacillus_phage	8.4e-37	68.1
WP_102816846.1\|1007441_1007624_+	hypothetical protein	NA	NA	NA	NA
WP_003664118.1\|1008662_1009121_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003667772.1\|1009348_1010287_-	alpha/beta hydrolase	A0A088FQA2	Mycobacterium_phage	9.2e-14	28.1
WP_109885268.1\|1010511_1011159_+	DsbA family oxidoreductase	NA	NA	NA	NA
WP_003667770.1\|1011291_1011645_+	hypothetical protein	NA	NA	NA	NA
WP_003667768.1\|1012829_1013594_-	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_003667767.1\|1013604_1014381_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_003667765.1\|1014373_1015243_-	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_003667763.1\|1015218_1016589_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_003667761.1\|1016597_1017032_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_003667760.1\|1017024_1017477_-	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_003667758.1\|1017483_1018716_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_003667757.1\|1018726_1019461_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA
WP_003667755.1\|1019444_1020395_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_003674025.1\|1020394_1020637_-	acyl carrier protein	NA	NA	NA	NA
WP_003667751.1\|1020656_1021631_-	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_003663667.1\|1021650_1022097_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003667749.1\|1022183_1022630_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_003667748.1\|1022954_1024034_+	tyrosine recombinase XerS	A0A0E3XA96	Gordonia_phage	6.9e-05	29.6
1025069:1025128	attL	NA	NA	NA	NA
WP_003667418.1\|1025144_1026755_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.0e-97	39.3
WP_011953475.1\|1027994_1028849_+	patatin family protein	NA	NA	NA	NA
WP_003663651.1\|1028865_1029513_+\|integrase	site-specific integrase	D2XR58	Bacillus_phage	2.5e-18	30.7
WP_003667741.1\|1029621_1030512_+	DMT family transporter	NA	NA	NA	NA
WP_003667418.1\|1030695_1032306_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.0e-97	39.3
WP_003667738.1\|1033831_1034521_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
1032323:1034153	attR	NA	NA	NA	NA
WP_012390566.1\|1034513_1035092_-	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
WP_003667734.1\|1035084_1036644_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	7.1e-19	37.1
WP_003667732.1\|1036633_1040299_-	nitrate reductase subunit alpha	NA	NA	NA	NA
WP_003667730.1\|1040444_1041464_+	HesA/MoeB/ThiF family protein	NA	NA	NA	NA
WP_003667728.1\|1041460_1041958_+	MogA/MoaB family molybdenum cofactor biosynthesis protein	NA	NA	NA	NA
WP_152111139.1\|1041947_1043165_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA
WP_003667725.1\|1043143_1043632_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA
WP_003667723.1\|1043631_1044204_+	NTP transferase domain-containing protein	NA	NA	NA	NA
WP_003667721.1\|1044193_1044478_+	hypothetical protein	NA	NA	NA	NA
WP_012390567.1\|1044628_1045684_+	sensor histidine kinase	NA	NA	NA	NA
WP_003667719.1\|1045676_1046330_+	response regulator transcription factor	NA	NA	NA	NA
WP_003667718.1\|1046425_1046698_+	hypothetical protein	NA	NA	NA	NA
WP_003667717.1\|1046703_1047672_+	hypothetical protein	NA	NA	NA	NA
WP_003663626.1\|1047676_1048582_+	hypothetical protein	NA	NA	NA	NA
WP_003667716.1\|1048642_1049836_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA
WP_003667715.1\|1049879_1050125_-	MoaD/ThiS family protein	NA	NA	NA	NA
WP_035161426.1\|1050124_1050526_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
WP_003667713.1\|1050656_1051106_+	flavodoxin	NA	NA	NA	NA
WP_086118256.1\|1051158_1052094_+	iron ABC transporter permease	NA	NA	NA	NA
WP_003667711.1\|1052090_1052867_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-15	29.2
WP_003667710.1\|1052920_1053943_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_080502971.1\|1056179_1056383_+	hypothetical protein	NA	NA	NA	NA
WP_152111142.1\|1056365_1057748_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.3e-29	26.8
WP_003664118.1\|1066715_1067174_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003667700.1\|1067426_1068386_+	hypothetical protein	NA	NA	NA	NA
WP_003667698.1\|1068401_1068833_+	hypothetical protein	NA	NA	NA	NA
WP_152111137.1\|1069836_1070715_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_003688751.1\|1070738_1071026_-\|transposase	transposase	NA	NA	NA	NA
WP_152111144.1\|1071082_1071709_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_003667696.1\|1071900_1072089_+	hypothetical protein	NA	NA	NA	NA
WP_003667694.1\|1072078_1072435_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_109897662.1\|1072505_1074050_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	7.3e-24	24.4
WP_003667691.1\|1074196_1076086_-	hypothetical protein	NA	NA	NA	NA
WP_003667690.1\|1076086_1076392_-	hypothetical protein	NA	NA	NA	NA
WP_003667689.1\|1076686_1077496_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_152111146.1\|1077488_1078307_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003667687.1\|1078303_1078951_+	thiamine phosphate synthase	NA	NA	NA	NA
WP_003667685.1\|1079026_1080286_-	chloride channel protein	NA	NA	NA	NA
WP_003667683.1\|1080443_1082750_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA
WP_035164274.1\|1082894_1083536_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003667086.1\|1089229_1089718_-	hypothetical protein	NA	NA	NA	NA
WP_152111315.1\|1089748_1090204_-	hypothetical protein	NA	NA	NA	NA
WP_003667102.1\|1090758_1090947_+	hypothetical protein	NA	NA	NA	NA
WP_003667088.1\|1090936_1091293_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003667087.1\|1091359_1092889_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_003667084.1\|1093245_1093527_-	hypothetical protein	NA	NA	NA	NA
WP_152111148.1\|1093641_1094478_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_003667082.1\|1094635_1095346_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_011953477.1\|1095342_1095903_-	cell filamentation protein Fic	S4TP71	Salmonella_phage	7.7e-08	28.8
WP_003667079.1\|1095904_1096318_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_109885091.1\|1096427_1098686_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_003667076.1\|1098873_1099569_+	hypothetical protein	NA	NA	NA	NA
WP_003667074.1\|1100205_1103307_-	SMC family ATPase	NA	NA	NA	NA
WP_003667073.1\|1103308_1104427_-	exonuclease SbcCD subunit D	A0A143FIT9	Bacillus_phage	7.1e-05	25.7
WP_003667070.1\|1104774_1105551_-	hypothetical protein	NA	NA	NA	NA
WP_003667066.1\|1109197_1111090_-	hypothetical protein	NA	NA	NA	NA
WP_003688751.1\|1112891_1113179_+\|transposase	transposase	NA	NA	NA	NA
WP_152111137.1\|1113202_1114081_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_003667061.1\|1114526_1114784_-	hypothetical protein	NA	NA	NA	NA
WP_003667060.1\|1114862_1116266_-	amino acid permease	NA	NA	NA	NA
WP_003667059.1\|1116258_1117191_-	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_152111137.1\|1117608_1118487_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_003688751.1\|1118510_1118798_-\|transposase	transposase	NA	NA	NA	NA
WP_003667058.1\|1118957_1119383_-	hypothetical protein	A0A2D1GPE1	Lactobacillus_phage	3.4e-16	37.7
WP_003667057.1\|1119674_1120643_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_003667055.1\|1120644_1121562_-	hypothetical protein	NA	NA	NA	NA
WP_003667054.1\|1121650_1122409_-	ATPase AAA	A0A059NT77	Lactococcus_phage	8.7e-63	48.2
WP_003688751.1\|1123707_1123995_+\|transposase	transposase	NA	NA	NA	NA
WP_152111137.1\|1124018_1124897_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_152111137.1\|1125876_1126755_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_003688751.1\|1126778_1127066_-\|transposase	transposase	NA	NA	NA	NA
WP_003667041.1\|1128402_1129248_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.2e-34	39.7
WP_003667039.1\|1130579_1131581_-	transcriptional regulator	NA	NA	NA	NA
WP_152111150.1\|1131977_1132376_-	transcriptional regulator	NA	NA	NA	NA
WP_003667037.1\|1132481_1133006_-	hypothetical protein	NA	NA	NA	NA
WP_003664510.1\|1133140_1134316_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	5.9e-119	55.7
WP_035167525.1\|1134315_1134714_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	4.3e-45	62.1
WP_003667034.1\|1134829_1135072_-	hypothetical protein	NA	NA	NA	NA
WP_003667032.1\|1135264_1135840_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003667031.1\|1135849_1136086_+	hypothetical protein	NA	NA	NA	NA
WP_003667030.1\|1136127_1136640_-	hypothetical protein	NA	NA	NA	NA
WP_003667028.1\|1136686_1138189_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_003663508.1\|1138323_1138509_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_003676754.1\|1138591_1140421_-	potassium transporter	NA	NA	NA	NA
WP_003667025.1\|1140559_1141963_+	C69 family dipeptidase	NA	NA	NA	NA
WP_003667023.1\|1142114_1142828_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.5e-27	36.6
WP_003667021.1\|1142824_1143676_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.4e-15	24.5
WP_003667018.1\|1144213_1145881_-	thioredoxin reductase	A0A2I2L5E1	Orpheovirus	8.0e-53	41.7
WP_003667015.1\|1145894_1146458_-	peroxiredoxin	NA	NA	NA	NA
WP_003673283.1\|1146558_1147440_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA
WP_003667012.1\|1147451_1148114_-	serine dehydratase	NA	NA	NA	NA
WP_003667009.1\|1148185_1148413_-	hypothetical protein	NA	NA	NA	NA
WP_003667008.1\|1148412_1148877_-	hypothetical protein	NA	NA	NA	NA
WP_003667006.1\|1149245_1149515_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_003667005.1\|1149660_1150539_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_003667003.1\|1150657_1151893_+	MFS transporter	NA	NA	NA	NA
WP_003667001.1\|1151913_1152615_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA
WP_152111151.1\|1153039_1154179_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	5.4e-85	45.2
WP_011953487.1\|1154196_1154940_+	cyclase family protein	NA	NA	NA	NA
WP_003666995.1\|1155001_1155901_-	prenyltransferase	NA	NA	NA	NA
WP_003666994.1\|1155981_1156962_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003666991.1\|1157008_1159027_-	beta-galactosidase	NA	NA	NA	NA
WP_003666989.1\|1159036_1160959_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_003666988.1\|1161119_1162142_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_011953489.1\|1162307_1162787_+	hypothetical protein	NA	NA	NA	NA
WP_152111153.1\|1162879_1164253_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	4.6e-30	27.0
WP_003666986.1\|1164748_1165576_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.4e-98	63.0
WP_003666985.1\|1165578_1165911_-	hypothetical protein	M5AWB2	Nitratiruptor_phage	3.2e-14	40.2
WP_003666984.1\|1166060_1166285_+	hypothetical protein	NA	NA	NA	NA
WP_003664118.1\|1166747_1167206_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003675625.1\|1167850_1168210_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_003668364.1\|1168332_1169763_-	amino acid permease	NA	NA	NA	NA
WP_003663813.1\|1169773_1170532_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_5

1191953 : 1232784

Lactobacillus_phage(25.0%)

head,tail,capsid,portal,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003668391.1\|1191953_1192907_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	5.7e-11	31.6
WP_152111155.1\|1192924_1195354_-	primosomal protein N'	NA	NA	NA	NA
WP_003668395.1\|1195354_1196560_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.4e-43	34.2
WP_003663855.1\|1196670_1196889_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_003663856.1\|1196885_1197506_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	6.5e-24	33.0
WP_003668397.1\|1197646_1197997_+	hypothetical protein	NA	NA	NA	NA
WP_003668399.1\|1198272_1199952_-	DNA repair protein RecN	NA	NA	NA	NA
WP_003668400.1\|1199967_1200420_-	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_003668402.1\|1200438_1201260_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_003668404.1\|1201271_1202144_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003663862.1\|1202162_1202444_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_003668406.1\|1202445_1203783_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	2.4e-39	34.9
WP_003668408.1\|1203775_1204636_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	5.6e-34	41.3
WP_011953504.1\|1204764_1205181_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_003663867.1\|1205182_1205620_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003668411.1\|1205709_1206384_-	hypothetical protein	NA	NA	NA	NA
WP_003668413.1\|1206385_1207462_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_152111157.1\|1207474_1208182_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_109913969.1\|1208682_1209021_-	type II toxin-antitoxin system PemK/MazF family toxin	A9D9Y1	Lactobacillus_prophage	9.6e-22	45.3
WP_109913968.1\|1209086_1209359_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_109884083.1\|1209526_1210639_-	LysM peptidoglycan-binding domain-containing protein	A0A075KJD2	Lactobacillus_phage	2.5e-42	40.6
WP_152111159.1\|1210640_1211078_-	hypothetical protein	NA	NA	NA	NA
WP_152111161.1\|1211238_1211619_-	hypothetical protein	A0A0A1ENR5	Lactobacillus_phage	5.5e-34	59.2
WP_152111317.1\|1211720_1211858_-	XkdX family protein	NA	NA	NA	NA
WP_152111163.1\|1211860_1212241_-	hypothetical protein	NA	NA	NA	NA
WP_109884359.1\|1212258_1212717_-	hypothetical protein	NA	NA	NA	NA
WP_152111165.1\|1212717_1213326_-	hypothetical protein	NA	NA	NA	NA
WP_132329344.1\|1213322_1215218_-	hypothetical protein	G4U401	Lactobacillus_phage	1.7e-51	28.8
WP_152111167.1\|1215225_1216623_-	DUF2479 domain-containing protein	NA	NA	NA	NA
WP_123835227.1\|1216635_1216815_-	hypothetical protein	NA	NA	NA	NA
WP_152111170.1\|1216811_1217156_-	hypothetical protein	NA	NA	NA	NA
WP_152111171.1\|1217145_1219422_-	peptidoglycan DD-metalloendopeptidase family protein	E9LUJ4	Lactobacillus_phage	1.2e-96	32.8
WP_152111173.1\|1219418_1220351_-\|tail	phage tail family protein	A0A2H4JGY6	uncultured_Caudovirales_phage	1.4e-06	28.9
WP_152111175.1\|1220368_1224031_-	transglycosylase SLT domain-containing protein	A0A2I6QQX2	Streptococcus_phage	2.1e-13	31.5
WP_132329452.1\|1224034_1224214_-	hypothetical protein	NA	NA	NA	NA
WP_132329365.1\|1224312_1224852_-	hypothetical protein	NA	NA	NA	NA
WP_152111177.1\|1224871_1225525_-\|tail	phage tail protein	NA	NA	NA	NA
WP_152111179.1\|1225527_1225938_-	hypothetical protein	NA	NA	NA	NA
WP_003668016.1\|1225946_1226507_-	hypothetical protein	NA	NA	NA	NA
WP_152111181.1\|1226496_1226811_-	hypothetical protein	NA	NA	NA	NA
WP_152111183.1\|1226810_1227176_-	hypothetical protein	Q77K22	Lactococcus_phage	1.1e-07	34.8
WP_152111185.1\|1227185_1228286_-\|capsid	phage capsid protein	D2J006	Enterococcus_phage	1.7e-38	31.3
WP_152111187.1\|1228301_1228955_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_003664118.1\|1229200_1229659_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_152111189.1\|1229862_1230159_-	hypothetical protein	NA	NA	NA	NA
WP_152111191.1\|1230169_1231120_-\|head	phage head morphogenesis protein	NA	NA	NA	NA
WP_152111193.1\|1231119_1232784_-\|portal	phage portal protein	D2IZF6	Enterococcus_phage	4.2e-62	32.4

DBSCAN-SWA_6

1243339 : 1249754

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152111223.1\|1243339_1244053_-	hypothetical protein	E9LUU3	Lactobacillus_phage	2.5e-48	41.3
WP_152111225.1\|1244065_1244644_-	DUF669 domain-containing protein	NA	NA	NA	NA
WP_152111227.1\|1244646_1245327_-	AAA family ATPase	E9LUU1	Lactobacillus_phage	6.5e-78	65.4
WP_152111229.1\|1245337_1245835_-	hypothetical protein	NA	NA	NA	NA
WP_152111231.1\|1245827_1246058_-	hypothetical protein	NA	NA	NA	NA
WP_152111233.1\|1246097_1246280_-	hypothetical protein	NA	NA	NA	NA
WP_152111318.1\|1246285_1246477_-	helix-turn-helix domain-containing protein	Q6SE98	Lactobacillus_prophage	2.7e-05	42.4
WP_144227396.1\|1246599_1246782_+	DUF1508 domain-containing protein	NA	NA	NA	NA
WP_152111235.1\|1247084_1247369_-	hypothetical protein	NA	NA	NA	NA
WP_132329431.1\|1247430_1248075_+	DUF4145 domain-containing protein	A0A1L2JZ52	Aeribacillus_phage	1.6e-20	31.3
WP_152111236.1\|1248285_1248489_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152111238.1\|1248640_1249279_+	helix-turn-helix domain-containing protein	A0A1B2APZ3	Phage_Wrath	4.4e-44	45.1
WP_152111240.1\|1249331_1249754_+	hypothetical protein	E9LUL0	Lactobacillus_phage	1.5e-16	61.0

DBSCAN-SWA_7

1354285 : 1445752

Staphylococcus_phage(18.18%)

tRNA,integrase,transposase

attL 1410264:1410283|attR 1422842:1422861

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003668546.1\|1354285_1356706_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	68.1
WP_003668547.1\|1357027_1358215_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.6e-148	67.7
WP_003668549.1\|1358375_1358915_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_003664118.1\|1359415_1359874_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003668551.1\|1360106_1361546_-	MFS transporter	NA	NA	NA	NA
WP_003675841.1\|1361669_1362125_+	transcriptional repressor	NA	NA	NA	NA
WP_003668553.1\|1362156_1363503_-	amino acid permease	NA	NA	NA	NA
WP_003668554.1\|1363593_1364205_+	VanZ family protein	NA	NA	NA	NA
WP_003668555.1\|1364551_1365076_+	membrane protein	NA	NA	NA	NA
WP_003668556.1\|1365099_1365543_-	hypothetical protein	NA	NA	NA	NA
WP_003668557.1\|1365542_1367045_-	LytTR family transcriptional regulator	Q6DMX4	Streptococcus_phage	4.4e-34	27.2
WP_003664225.1\|1367171_1367603_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_003668559.1\|1367735_1368584_+	aldo/keto reductase	NA	NA	NA	NA
WP_003668560.1\|1368681_1369980_-	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA
WP_003668561.1\|1369972_1371214_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_109897409.1\|1371509_1372271_+	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	7.6e-51	42.4
WP_003668563.1\|1372392_1373100_-	LysM peptidoglycan-binding domain-containing protein	A0A0E3XCL7	Enterococcus_phage	9.3e-27	46.4
WP_003668564.1\|1373428_1375129_-	phosphoenolpyruvate carboxykinase	NA	NA	NA	NA
WP_011953516.1\|1375283_1376045_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_003668566.1\|1376429_1377323_-	hypothetical protein	NA	NA	NA	NA
WP_003664234.1\|1377331_1377910_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	3.6e-53	59.7
WP_003668567.1\|1377975_1380210_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.8e-249	59.4
WP_152111254.1\|1380615_1382013_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_109897411.1\|1382050_1382605_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_109915923.1\|1382869_1384363_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_003668340.1\|1384484_1384841_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_003668338.1\|1384830_1385019_-	hypothetical protein	NA	NA	NA	NA
WP_152111256.1\|1391621_1391870_-	DUF1797 family protein	NA	NA	NA	NA
WP_109897699.1\|1391926_1392940_-	flippase-like domain-containing protein	NA	NA	NA	NA
WP_011953518.1\|1392939_1393968_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_085680003.1\|1393970_1395188_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_152111258.1\|1395422_1397153_-	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	1.5e-14	27.0
WP_003664342.1\|1397152_1397419_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003674706.1\|1397540_1397726_-	hypothetical protein	NA	NA	NA	NA
WP_152111260.1\|1398019_1400224_+	AAA domain-containing protein	A0A223W0B1	Agrobacterium_phage	2.2e-122	39.8
WP_003667537.1\|1402318_1402918_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_134989321.1\|1403131_1403737_-	ECF transporter S component	NA	NA	NA	NA
WP_152111261.1\|1403886_1404633_+	hypothetical protein	NA	NA	NA	NA
WP_152111263.1\|1404670_1405357_-	hypothetical protein	NA	NA	NA	NA
WP_152111265.1\|1405356_1406223_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-20	31.6
WP_011953520.1\|1406200_1406584_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_152111267.1\|1406747_1407722_-	hypothetical protein	NA	NA	NA	NA
WP_152111269.1\|1407655_1409098_-	cellulase family glycosylhydrolase	NA	NA	NA	NA
WP_003668598.1\|1409663_1410218_-	cell wall-binding protein	NA	NA	NA	NA
WP_003668600.1\|1410127_1410487_-	hypothetical protein	NA	NA	NA	NA
1410264:1410283	attL	NA	NA	NA	NA
WP_152111271.1\|1411115_1412498_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.4e-29	27.0
WP_066036092.1\|1412750_1413209_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.6e-16	36.3
WP_152111273.1\|1413311_1413521_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_108463651.1\|1413551_1413932_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B1P773	Bacillus_phage	1.2e-12	37.8
WP_003668604.1\|1413958_1414810_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.4e-15	24.8
WP_003668612.1\|1417309_1417657_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_003668614.1\|1417656_1418301_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_152111275.1\|1418247_1418916_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_121496153.1\|1418931_1419273_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.3e-23	45.5
WP_152111277.1\|1419387_1423854_-	dextransucrase	NA	NA	NA	NA
1422842:1422861	attR	NA	NA	NA	NA
WP_003668620.1\|1424009_1424891_-	hydrolase Nlp/P60	A0A1J0GW44	Streptomyces_phage	6.6e-22	44.3
WP_003668623.1\|1425041_1426415_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.7e-30	27.0
WP_003668625.1\|1426924_1428502_-	peptide chain release factor 3	A0A1B0RXH7	Streptococcus_phage	6.3e-31	26.1
WP_003668627.1\|1428688_1430155_+	transcriptional regulator	NA	NA	NA	NA
WP_152111279.1\|1430291_1431260_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_152111281.1\|1431256_1432846_-	hypothetical protein	NA	NA	NA	NA
WP_003668630.1\|1432829_1433957_-	AI-2E family transporter	NA	NA	NA	NA
WP_035167652.1\|1435847_1437092_-\|transposase	ISLre2 family transposase	NA	NA	NA	NA
WP_003667537.1\|1438305_1438905_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003668645.1\|1440103_1441078_-	glycosyltransferase	NA	NA	NA	NA
WP_003668648.1\|1441190_1441760_-	hypothetical protein	NA	NA	NA	NA
WP_003668649.1\|1441827_1443144_-	hydrolase Nlp/P60	A0A1W6DXV0	Rhodococcus_phage	4.4e-14	44.7
WP_003672961.1\|1443369_1444968_-	N-acetylmuramoyl-L-alanine amidase	A0A1B1P878	Bacillus_phage	1.7e-12	35.8
WP_003664118.1\|1445293_1445752_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0

DBSCAN-SWA_8

1639220 : 1685031

Streptococcus_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003664118.1\|1639220_1639679_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003668907.1\|1640430_1642203_+	oleate hydratase	NA	NA	NA	NA
WP_109897528.1\|1642280_1643042_+	NADPH-dependent oxidoreductase	NA	NA	NA	NA
WP_003668911.1\|1643038_1644178_-	beta-glucanase	NA	NA	NA	NA
WP_003668913.1\|1644192_1645500_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003668917.1\|1645642_1646506_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_011953545.1\|1647678_1648383_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_011953546.1\|1648393_1649149_-	phosphate ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.5e-14	28.9
WP_003668923.1\|1649159_1650041_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA
WP_003668926.1\|1650040_1650940_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA
WP_003668928.1\|1650944_1651850_-	phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003668930.1\|1651942_1652653_+	response regulator transcription factor	NA	NA	NA	NA
WP_003668936.1\|1653901_1654114_-	hypothetical protein	NA	NA	NA	NA
WP_003668938.1\|1654277_1655291_-	hypothetical protein	NA	NA	NA	NA
WP_003668940.1\|1655406_1655937_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003668941.1\|1656121_1656709_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_003668943.1\|1656732_1656858_+	hypothetical protein	NA	NA	NA	NA
WP_003668945.1\|1656864_1657044_+	mannose-6-phosphate isomerase	NA	NA	NA	NA
WP_003668946.1\|1657040_1657934_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003668948.1\|1658062_1659169_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_080502978.1\|1659186_1659390_+	hypothetical protein	NA	NA	NA	NA
WP_003668950.1\|1659254_1659575_+	protein-tyrosine-phosphatase	NA	NA	NA	NA
WP_003668952.1\|1659698_1660742_-	hypothetical protein	NA	NA	NA	NA
WP_003664757.1\|1660933_1661491_-	elongation factor P	NA	NA	NA	NA
WP_003668955.1\|1661750_1662932_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_011953549.1\|1664733_1665597_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003668959.1\|1665712_1666189_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003668960.1\|1666576_1667263_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_011953550.1\|1667286_1667901_-	sugar permease	NA	NA	NA	NA
WP_003668962.1\|1668206_1669262_-	zinc-dependent alcohol dehydrogenase family protein	K7Z7U2	Megavirus	8.5e-08	23.0
WP_003668963.1\|1669580_1670471_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.5e-29	29.8
WP_003668964.1\|1670582_1670729_+	hypothetical protein	NA	NA	NA	NA
WP_080502982.1\|1670729_1670912_+	hypothetical protein	NA	NA	NA	NA
WP_003668966.1\|1671131_1672379_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	5.7e-11	23.9
WP_003668967.1\|1672446_1672689_-	cytochrome b5	NA	NA	NA	NA
WP_011953551.1\|1672780_1673251_-\|transposase	transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-11	31.2
WP_003668971.1\|1673431_1673719_+	hypothetical protein	NA	NA	NA	NA
WP_003668972.1\|1673898_1674486_-	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_003672994.1\|1674552_1674669_-	hypothetical protein	NA	NA	NA	NA
WP_003668974.1\|1674939_1676151_+	putative hydroxymethylpyrimidine transporter CytX	NA	NA	NA	NA
WP_003668975.1\|1676224_1676746_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003668976.1\|1676961_1677426_-	hypothetical protein	NA	NA	NA	NA
WP_003668977.1\|1677438_1678506_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_011953553.1\|1678598_1679759_-	MFS transporter	NA	NA	NA	NA
WP_035164165.1\|1679777_1680314_+	TIGR01440 family protein	NA	NA	NA	NA
WP_003668980.1\|1680337_1680505_-	hypothetical protein	NA	NA	NA	NA
WP_003668981.1\|1680505_1681378_-	RNA methyltransferase	NA	NA	NA	NA
WP_003668982.1\|1681448_1682687_-	OFA family MFS transporter	NA	NA	NA	NA
WP_003667057.1\|1684062_1685031_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1689258 : 1714167

Lactococcus_phage(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011953556.1\|1689258_1689741_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	1.1e-05	38.3
WP_003668994.1\|1689932_1691702_-	alpha-glycosidase	NA	NA	NA	NA
WP_003668995.1\|1691698_1693045_-	SLC45 family MFS transporter	NA	NA	NA	NA
WP_003668997.1\|1693312_1693606_-	hypothetical protein	Q6NE04	Leptospira_phage	1.3e-19	53.8
WP_003673001.1\|1693700_1694171_+	hypothetical protein	NA	NA	NA	NA
WP_011953557.1\|1695305_1696859_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.1e-19	30.2
WP_003669001.1\|1697373_1698564_+	ATP-binding protein	NA	NA	NA	NA
WP_003669003.1\|1698560_1699484_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	1.4e-27	32.5
WP_011953558.1\|1699674_1701771_-	LTA synthase family protein	W6LM83	Streptococcus_phage	3.9e-153	45.4
WP_003669008.1\|1701981_1702851_+	DMT family transporter	NA	NA	NA	NA
WP_003664118.1\|1703058_1703517_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_003664118.1\|1703827_1704286_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0
WP_152111295.1\|1704425_1704665_-	NADH oxidase	NA	NA	NA	NA
WP_003669011.1\|1704836_1706012_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	1.7e-118	55.4
WP_035167654.1\|1706011_1706410_-\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	3.9e-46	62.9
WP_011953560.1\|1706563_1708870_-	AAA family ATPase	NA	NA	NA	NA
WP_003669016.1\|1709089_1709740_+	membrane protein	NA	NA	NA	NA
WP_003669019.1\|1709813_1710467_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_003669021.1\|1710496_1711774_+	GTPase HflX	NA	NA	NA	NA
WP_003664819.1\|1711820_1712072_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003669022.1\|1712074_1712272_-	CsbD family protein	NA	NA	NA	NA
WP_003669024.1\|1712490_1713504_-	D-2-hydroxyacid dehydrogenase	A0A1J0F959	Only_Syngen_Nebraska_virus	3.6e-40	32.8
WP_003664118.1\|1713708_1714167_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	3.9e-18	37.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045049

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection